Citrus Sinensis ID: 021854
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
No hits with e-value below 0.001 by BLAST
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 306 | ||||||
| 224073720 | 306 | predicted protein [Populus trichocarpa] | 0.964 | 0.964 | 0.744 | 1e-123 | |
| 225442154 | 303 | PREDICTED: uncharacterized protein LOC10 | 0.973 | 0.983 | 0.694 | 1e-117 | |
| 255560651 | 302 | conserved hypothetical protein [Ricinus | 0.973 | 0.986 | 0.717 | 1e-116 | |
| 356561047 | 312 | PREDICTED: uncharacterized protein LOC10 | 0.960 | 0.942 | 0.671 | 1e-112 | |
| 356522384 | 316 | PREDICTED: uncharacterized protein LOC10 | 0.960 | 0.930 | 0.649 | 1e-110 | |
| 79378061 | 312 | Rossmann-fold NAD(P)-binding domain-cont | 0.983 | 0.964 | 0.611 | 1e-101 | |
| 37991868 | 310 | expressed protein [Oryza sativa Japonica | 0.859 | 0.848 | 0.669 | 2e-98 | |
| 218193028 | 308 | hypothetical protein OsI_12007 [Oryza sa | 0.856 | 0.850 | 0.667 | 3e-98 | |
| 297842009 | 311 | hypothetical protein ARALYDRAFT_476397 [ | 0.973 | 0.958 | 0.598 | 5e-98 | |
| 79321173 | 311 | Rossmann-fold NAD(P)-binding domain-cont | 0.986 | 0.971 | 0.602 | 2e-97 |
| >gi|224073720|ref|XP_002304142.1| predicted protein [Populus trichocarpa] gi|222841574|gb|EEE79121.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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Score = 447 bits (1149), Expect = e-123, Method: Compositional matrix adjust.
Identities = 227/305 (74%), Positives = 254/305 (83%), Gaps = 10/305 (3%)
Query: 4 TAFPSTLVIQTSHISFTSQKKSFELANPSSLIFNFEKKVLFRCSAKKKISFVDQILDYIE 63
TA PST QTS +F SQ ++ +PS LIF + L RCSAKKKISFVDQILDYIE
Sbjct: 3 TALPSTAFCQTS-FTFPSQNPC-KVKSPS-LIFRTKSHGLIRCSAKKKISFVDQILDYIE 59
Query: 64 GGPKLRKWYGAPDLLPKDGSNEEDEEKEDEFP----EEARDAVLVTDGDSDIGQMVILSL 119
GGPKLRKWYGAPDLLPKDGS+ EDE DE P E RDAVLVTDGDS+IGQM+ILSL
Sbjct: 60 GGPKLRKWYGAPDLLPKDGSDTEDE---DELPGNALNEVRDAVLVTDGDSEIGQMIILSL 116
Query: 120 IVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEGFISNAG 179
IVK+ R+KALVKDKR AME+FGTYVESMAGDAS+K FLK ALRGVR+IICP+EGF+SN G
Sbjct: 117 IVKKARVKALVKDKRTAMEAFGTYVESMAGDASSKPFLKKALRGVRAIICPNEGFLSNGG 176
Query: 180 SLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMASGIPYTIIRTGVLQNT 239
L+GV+HVILLSQLSVYRGSGGIQALMK NARKLAE+DES L+ASGIPYTIIR G+LQ+T
Sbjct: 177 DLQGVKHVILLSQLSVYRGSGGIQALMKNNARKLAEKDESTLVASGIPYTIIRVGMLQDT 236
Query: 240 PGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVVNGEEKVSDWKKCFSR 299
PGG QGF FE+G A GSLSKEDAAFICVEAL+ +PQ G FE VNGEEKVSDWK+ +R
Sbjct: 237 PGGTQGFSFEKGSAEKGSLSKEDAAFICVEALDVVPQIGFTFEAVNGEEKVSDWKERLTR 296
Query: 300 LMEKT 304
LMEK+
Sbjct: 297 LMEKS 301
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Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225442154|ref|XP_002274144.1| PREDICTED: uncharacterized protein LOC100246327 [Vitis vinifera] gi|297743019|emb|CBI35886.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 426 bits (1096), Expect = e-117, Method: Compositional matrix adjust.
Identities = 214/308 (69%), Positives = 250/308 (81%), Gaps = 10/308 (3%)
Query: 1 MAGTAFPSTLVIQTSHIS-FTSQKKSFELANPSSLIFNFEKK-VLFRCSAKKKISFVDQI 58
MAG P H S F S + S + SS +F ++ L CSAKKK FVDQI
Sbjct: 1 MAGYLLPY-------HTSLFLSSQNSHRITATSSFLFKIDRPGSLVCCSAKKKAGFVDQI 53
Query: 59 LDYIEGGPKLRKWYGAPDLLPKDGSNEEDEEKEDEFPEEARDAVLVTDGDSDIGQMVILS 118
LDYIEGGPKLRKWYGAPDLLPKDGS+ E++++ E EE RDAVLVTDGDS+IGQMVILS
Sbjct: 54 LDYIEGGPKLRKWYGAPDLLPKDGSSVEEDDESAEV-EEDRDAVLVTDGDSEIGQMVILS 112
Query: 119 LIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEGFISNA 178
LIVKR+RIKALVKDKR AME+FGTYVESMAGDA++K F + ALRGVR+IICP+EG ISN
Sbjct: 113 LIVKRSRIKALVKDKRAAMEAFGTYVESMAGDANDKSFQRKALRGVRTIICPNEGSISNF 172
Query: 179 GSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMASGIPYTIIRTGVLQN 238
GSL GVQH+ILLSQLS YRG+GGIQALM+GNARKLAE+DES++ SGIPYTIIR G+LQN
Sbjct: 173 GSLMGVQHIILLSQLSAYRGTGGIQALMQGNARKLAEKDESIVTGSGIPYTIIRAGLLQN 232
Query: 239 TPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVVNGEEKVSDWKKCFS 298
+PGGK+GF F+EG AA G LSKEDAAFICVEA++++P+TGL+FEV NG EKVSDWK+CF
Sbjct: 233 SPGGKEGFSFKEGVAATGRLSKEDAAFICVEAVDTVPETGLVFEVANGGEKVSDWKECFK 292
Query: 299 RLMEKTGK 306
L+EK K
Sbjct: 293 ALVEKPDK 300
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Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255560651|ref|XP_002521339.1| conserved hypothetical protein [Ricinus communis] gi|223539417|gb|EEF41007.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 218/304 (71%), Positives = 251/304 (82%), Gaps = 6/304 (1%)
Query: 1 MAGTAFPSTLVIQTS-HISFTSQKKSFELANPSSLIFNFEKKVLFRCSAKKKISFVDQIL 59
MAGT F S L+ Q+ +S+ +Q KS + S + + L CSAKKKI F+DQIL
Sbjct: 1 MAGT-FSSILLWQSCLSLSYQNQSKSLDF---SPIFHTTNNRSLVHCSAKKKIGFMDQIL 56
Query: 60 DYIEGGPKLRKWYGAPDLLPKDGSNEEDEEKEDEFPEEARDAVLVTDGDSDIGQMVILSL 119
DYIEGGPKLRKWYGAPDLLPKDGS +DE++ E EE RDA+LVTDGDS+IGQMVILSL
Sbjct: 57 DYIEGGPKLRKWYGAPDLLPKDGSTMQDEDEFSE-EEEVRDAILVTDGDSEIGQMVILSL 115
Query: 120 IVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEGFISNAG 179
IVKR ++KALVKDKR+AME+FGTYVESMAGD S+ F+K ALRGVR+IICP EGF+S+ G
Sbjct: 116 IVKRAKVKALVKDKRSAMEAFGTYVESMAGDTSSMLFIKKALRGVRAIICPKEGFLSSVG 175
Query: 180 SLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMASGIPYTIIRTGVLQNT 239
SLKGV+HVILLSQLSVYRGS GI+A+MK NARKL EQDES L+ASGIP TIIR G+LQNT
Sbjct: 176 SLKGVKHVILLSQLSVYRGSSGIEAMMKSNARKLTEQDESALVASGIPCTIIRVGMLQNT 235
Query: 240 PGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVVNGEEKVSDWKKCFSR 299
PGG QGF FE+GCA GSLSKEDAAFICVEALE++PQ IFEVVNGEEKVSDWK+C +R
Sbjct: 236 PGGTQGFNFEKGCAEKGSLSKEDAAFICVEALETVPQAEFIFEVVNGEEKVSDWKECLAR 295
Query: 300 LMEK 303
LMEK
Sbjct: 296 LMEK 299
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Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356561047|ref|XP_003548797.1| PREDICTED: uncharacterized protein LOC100806043 [Glycine max] | Back alignment and taxonomy information |
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Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust.
Identities = 204/304 (67%), Positives = 245/304 (80%), Gaps = 10/304 (3%)
Query: 8 STLVIQTSHISFTSQKKSFELANPSSLIFNFEKKV----LFRCSAKKKISFVDQILDYIE 63
STL Q S + TSQ+ A SS FN E L C AKKK+SF++QILDYIE
Sbjct: 11 STLPFQKS-VPLTSQRSG--TAFGSSFQFNRENGTVVTPLVVCHAKKKLSFMEQILDYIE 67
Query: 64 GGPKLRKWYGAPDLLPKDGSNEEDEEKEDEFPE-EARDAVLVTDGDSDIGQMVILSLIVK 122
GGPKLRKWYGAPD+L KDG+ ED ED++PE E RDAVLVTDGDS++GQMVILSLIVK
Sbjct: 68 GGPKLRKWYGAPDILEKDGTAIED--NEDDYPEDEVRDAVLVTDGDSEMGQMVILSLIVK 125
Query: 123 RTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEGFISNAGSLK 182
+ R+K LVKDKR A+E+FG+YVESMAGD S+K+F+K ALRGVR+IICP+EGF+S+ GSL+
Sbjct: 126 KARVKTLVKDKRVALEAFGSYVESMAGDTSDKRFVKKALRGVRTIICPNEGFLSSVGSLQ 185
Query: 183 GVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMASGIPYTIIRTGVLQNTPGG 242
GVQHVI+LS+LSVY G G Q++MK NA+KLAEQDES+L SGIPYTIIRTG LQ+TPGG
Sbjct: 186 GVQHVIVLSRLSVYGGQSGFQSMMKSNAKKLAEQDESVLKTSGIPYTIIRTGALQDTPGG 245
Query: 243 KQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVVNGEEKVSDWKKCFSRLME 302
KQGF F+EGCAA+GS+SKEDAAF+CV A + +PQTG IFEV NG+ KVSDWK+C + LME
Sbjct: 246 KQGFTFDEGCAASGSISKEDAAFVCVAAFDCVPQTGFIFEVANGDNKVSDWKECLATLME 305
Query: 303 KTGK 306
K +
Sbjct: 306 KASQ 309
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Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356522384|ref|XP_003529826.1| PREDICTED: uncharacterized protein LOC100801216 [Glycine max] | Back alignment and taxonomy information |
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Score = 402 bits (1034), Expect = e-110, Method: Compositional matrix adjust.
Identities = 200/308 (64%), Positives = 243/308 (78%), Gaps = 14/308 (4%)
Query: 8 STLVIQTSHISFTSQKKSFELANPSSLIFNFEK----KVLFRCSAKKKISFVDQILDYIE 63
STL Q S + SQ+ SS +F+ E L C AKKK+SF++QILDYIE
Sbjct: 11 STLSFQKS-VPLNSQRSGTSFG--SSFLFSRENGSVVPSLVVCHAKKKLSFMEQILDYIE 67
Query: 64 GGPKLRKWYGAPDLLPKDGSNEEDEEKEDEFP-----EEARDAVLVTDGDSDIGQMVILS 118
GGPKLRKWYGAPD+L KDG+ ED+E D++P +E RDAVLVTDGDS+ GQMVILS
Sbjct: 68 GGPKLRKWYGAPDILEKDGTAIEDDE--DDYPGEQIEDEVRDAVLVTDGDSETGQMVILS 125
Query: 119 LIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEGFISNA 178
LIVK+ R+K LVKDKR A+E+FG+YVESMAGD S+K+FLK ALRGVR+IICP+EGF+S+
Sbjct: 126 LIVKKARVKTLVKDKRVALEAFGSYVESMAGDTSDKRFLKKALRGVRTIICPNEGFLSSV 185
Query: 179 GSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMASGIPYTIIRTGVLQN 238
GSL+GVQHVI+LSQLSVY G G Q++MK NA+KLAEQDES+L SGIPYTIIRTG L +
Sbjct: 186 GSLQGVQHVIVLSQLSVYGGKSGFQSMMKSNAKKLAEQDESVLKTSGIPYTIIRTGALLD 245
Query: 239 TPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVVNGEEKVSDWKKCFS 298
PGGK+GF F+EGCAA GS+SKEDAAF+CV AL+ +PQTG IFEV NG+ KVSDWK+C +
Sbjct: 246 APGGKRGFTFDEGCAARGSISKEDAAFVCVAALDCVPQTGFIFEVANGDNKVSDWKECLA 305
Query: 299 RLMEKTGK 306
LME+T +
Sbjct: 306 TLMEETSQ 313
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Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|79378061|ref|NP_177408.3| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana] gi|44917555|gb|AAS49102.1| At1g72640 [Arabidopsis thaliana] gi|332197230|gb|AEE35351.1| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 373 bits (957), Expect = e-101, Method: Compositional matrix adjust.
Identities = 189/309 (61%), Positives = 230/309 (74%), Gaps = 8/309 (2%)
Query: 1 MAGTAFPSTLVIQTSHISFTSQKKSFELANPSSLIFNFEKKVLFRCSAKKKISFVDQILD 60
MAGT+ PS L+ Q + F+S + E AN + K+ L RC AKKKISFVDQILD
Sbjct: 1 MAGTSLPSCLLSQGPSLLFSSSNQDSE-ANKCRIGITSGKRCLVRCFAKKKISFVDQILD 59
Query: 61 YIEGGPKLRKWYGAPDLLPKDGSNEED------EEKEDEFPEEARDAVLVTDGDSDIGQM 114
YIEGGPKLRKWYGAP+L PKDGS D EEKED+ E +D V VTDGDSD+GQM
Sbjct: 60 YIEGGPKLRKWYGAPELRPKDGSLSGDDDEFEAEEKEDDLDGE-KDVVFVTDGDSDLGQM 118
Query: 115 VILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEGF 174
+IL LIVK TR+KALVKDKR A+E+FG+YVE GDAS+++FLK A +GV ++I P+EGF
Sbjct: 119 IILQLIVKGTRVKALVKDKRKALEAFGSYVELTTGDASDERFLKKAFKGVGAVISPTEGF 178
Query: 175 ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMASGIPYTIIRTG 234
+S S +GV+H +LLSQLSVY SGGIQA+M A+KLAEQDE+ ++S +PYTIIRTG
Sbjct: 179 LSIVKSFRGVKHAVLLSQLSVYESSGGIQAMMNSKAKKLAEQDENAAISSNVPYTIIRTG 238
Query: 235 VLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVVNGEEKVSDWK 294
L+N+PGG QGF F G AA GS+SKEDAA ICVEAL IP TGLIFEV NGEE VSDW+
Sbjct: 239 KLENSPGGSQGFNFSAGAAAKGSISKEDAARICVEALSVIPPTGLIFEVTNGEEVVSDWE 298
Query: 295 KCFSRLMEK 303
++M++
Sbjct: 299 GQLMKVMQR 307
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Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|37991868|gb|AAR06314.1| expressed protein [Oryza sativa Japonica Group] gi|108708765|gb|ABF96560.1| expressed protein [Oryza sativa Japonica Group] | Back alignment and taxonomy information |
|---|
Score = 365 bits (936), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 178/266 (66%), Positives = 215/266 (80%), Gaps = 3/266 (1%)
Query: 35 IFNFEKKVLFRCSAKKKISFVDQILDYIEGGPKLRKWYGAPDLLPKDGSNEEDEEKEDEF 94
+FN V+ R +K + SF D+ILDYIEGGPKLR+WYGAPDLLPKDGS E+ E++ E
Sbjct: 38 LFNAATAVVVRSRSKDEASFTDRILDYIEGGPKLRRWYGAPDLLPKDGSAEDGEDEPSEI 97
Query: 95 P-EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASN 153
EE RDAVLVT+GDS+IGQMVILSLI+KR RIKALVKD+R+ E+FGTYVE M G+ +
Sbjct: 98 DIEEPRDAVLVTNGDSEIGQMVILSLILKRARIKALVKDRRSTEEAFGTYVECMVGNMED 157
Query: 154 KKFLKTALRGVRSIICPSE-GFISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK 212
K F K ALRGVR+IICP++ GF S+ LKGVQH++LLSQLSVYRGSGG+QA+M RK
Sbjct: 158 KSFTKKALRGVRAIICPADDGFFSDL-DLKGVQHIVLLSQLSVYRGSGGLQAIMNSKLRK 216
Query: 213 LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALE 272
LAE+DE +++ASGIP TIIRTG +Q+TPGG +GF F EG AA G +SKEDAA ICVEAL+
Sbjct: 217 LAERDEEVVLASGIPSTIIRTGSMQSTPGGDRGFDFTEGAAAKGRMSKEDAATICVEALD 276
Query: 273 SIPQTGLIFEVVNGEEKVSDWKKCFS 298
SIPQT LIFEV NG+EKV+DWK F+
Sbjct: 277 SIPQTTLIFEVANGDEKVTDWKAWFA 302
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Source: Oryza sativa Japonica Group Species: Oryza sativa Genus: Oryza Family: Poaceae Order: Poales Class: Liliopsida Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|218193028|gb|EEC75455.1| hypothetical protein OsI_12007 [Oryza sativa Indica Group] | Back alignment and taxonomy information |
|---|
Score = 364 bits (935), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 177/265 (66%), Positives = 215/265 (81%), Gaps = 3/265 (1%)
Query: 35 IFNFEKKVLFRCSAKKKISFVDQILDYIEGGPKLRKWYGAPDLLPKDGSNEEDEEKEDEF 94
+FN V+ R +K + SF D+ILDYIEGGPKLR+WYGAPDLLPKDGS E+ E++ +
Sbjct: 38 LFNAATAVVVRSRSKDEASFTDRILDYIEGGPKLRRWYGAPDLLPKDGSAEDGEDEPSDI 97
Query: 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNK 154
EE RDAVLVT+GDS+IGQMVILSLI+KR RIKALVKD+R+ E+FGTYVE M G+ +K
Sbjct: 98 -EEPRDAVLVTNGDSEIGQMVILSLILKRARIKALVKDRRSTEEAFGTYVECMVGNMEDK 156
Query: 155 KFLKTALRGVRSIICPSE-GFISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKL 213
F K ALRGVR+IICP++ GF S+ LKGVQH++LLSQLSVYRGSGG+QA+M RKL
Sbjct: 157 SFTKKALRGVRAIICPADDGFFSDL-DLKGVQHIVLLSQLSVYRGSGGLQAIMNSKLRKL 215
Query: 214 AEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALES 273
AE+DE +++ASGIP TIIRTG +Q+TPGG +GF F EG AA G +SKEDAA ICVEAL+S
Sbjct: 216 AERDEEVVLASGIPSTIIRTGSMQSTPGGDRGFDFTEGAAAKGRMSKEDAATICVEALDS 275
Query: 274 IPQTGLIFEVVNGEEKVSDWKKCFS 298
IPQT LIFEV NG+EKV+DWK F+
Sbjct: 276 IPQTTLIFEVANGDEKVTDWKAWFA 300
|
Source: Oryza sativa Indica Group Species: Oryza sativa Genus: Oryza Family: Poaceae Order: Poales Class: Liliopsida Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297842009|ref|XP_002888886.1| hypothetical protein ARALYDRAFT_476397 [Arabidopsis lyrata subsp. lyrata] gi|297334727|gb|EFH65145.1| hypothetical protein ARALYDRAFT_476397 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 363 bits (932), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 186/311 (59%), Positives = 229/311 (73%), Gaps = 13/311 (4%)
Query: 1 MAGTAFPSTLVIQTSHISFTSQKKSFELANPSSLIFNFEKKVLFRCSAKKKISFVDQILD 60
MAGT+ PS L+ Q + F S + E + + K+ RC AKKKISFVDQILD
Sbjct: 1 MAGTSLPSCLLSQGPSLLFCSSNQVSE--TKCRIGISSGKRCRVRCLAKKKISFVDQILD 58
Query: 61 YIEGGPKLRKWYGAPDLLPKDGSNEEDEEKEDEF-PEEARD-------AVLVTDGDSDIG 112
YIEGGPKLRKWYGAP+L PKDGS D+ DEF EEA+D V VTDGDSD+G
Sbjct: 59 YIEGGPKLRKWYGAPELRPKDGSLSGDD---DEFEAEEAKDDLDGENDVVFVTDGDSDLG 115
Query: 113 QMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE 172
QM+IL LIVK TR+KALVKDKR A+E+FG+YVE +GDAS+++FLK A +GV ++I P+E
Sbjct: 116 QMIILQLIVKGTRVKALVKDKRKALEAFGSYVELTSGDASDERFLKKAFKGVGAVISPTE 175
Query: 173 GFISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMASGIPYTIIR 232
GF+ N S +GV+H +LLSQLSVY SGGIQA+M A+KLAEQDE+ +++S +PYTIIR
Sbjct: 176 GFLPNVKSFRGVKHAVLLSQLSVYESSGGIQAMMNNKAKKLAEQDENAVISSNVPYTIIR 235
Query: 233 TGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVVNGEEKVSD 292
TG L+N+PGG QGF F G AA GS+SKEDAA ICVEAL IP TGLIFEV NGEE VSD
Sbjct: 236 TGKLENSPGGNQGFNFNAGAAAKGSISKEDAARICVEALSVIPPTGLIFEVTNGEEVVSD 295
Query: 293 WKKCFSRLMEK 303
W+ ++M++
Sbjct: 296 WEGQLMKVMQR 306
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|79321173|ref|NP_001031269.1| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana] gi|332197231|gb|AEE35352.1| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 361 bits (927), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 185/307 (60%), Positives = 232/307 (75%), Gaps = 5/307 (1%)
Query: 1 MAGTAFPSTLVIQTSHISFTSQKKSFELANPSSLIFNFEKKVLFRCSAKKKISFVDQILD 60
MAGT+ PS L+ Q + F+S + E AN + K+ L RC AKKKISFVDQILD
Sbjct: 1 MAGTSLPSCLLSQGPSLLFSSSNQDSE-ANKCRIGITSGKRCLVRCFAKKKISFVDQILD 59
Query: 61 YIEGGPKLRKWYGAPDLLPKDGS----NEEDEEKEDEFPEEARDAVLVTDGDSDIGQMVI 116
YIEGGPKLRKWYGAP+L PKDGS ++E EE++++ + +D V VTDGDSD+GQM+I
Sbjct: 60 YIEGGPKLRKWYGAPELRPKDGSLSGDDDEFEEEKEDDLDGEKDVVFVTDGDSDLGQMII 119
Query: 117 LSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEGFIS 176
L LIVK TR+KALVKDKR A+E+FG+YVE GDAS+++FLK A +GV ++I P+EGF+S
Sbjct: 120 LQLIVKGTRVKALVKDKRKALEAFGSYVELTTGDASDERFLKKAFKGVGAVISPTEGFLS 179
Query: 177 NAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMASGIPYTIIRTGVL 236
S +GV+H +LLSQLSVY SGGIQA+M A+KLAEQDE+ ++S +PYTIIRTG L
Sbjct: 180 IVKSFRGVKHAVLLSQLSVYESSGGIQAMMNSKAKKLAEQDENAAISSNVPYTIIRTGKL 239
Query: 237 QNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVVNGEEKVSDWKKC 296
+N+PGG QGF F G AA GS+SKEDAA ICVEAL IP TGLIFEV NGEE VSDW+
Sbjct: 240 ENSPGGSQGFNFSAGAAAKGSISKEDAARICVEALSVIPPTGLIFEVTNGEEVVSDWEGQ 299
Query: 297 FSRLMEK 303
++M++
Sbjct: 300 LMKVMQR 306
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Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 306 | ||||||
| TAIR|locus:2030270 | 312 | AT1G72640 [Arabidopsis thalian | 0.986 | 0.967 | 0.590 | 1.9e-90 | |
| TAIR|locus:2015651 | 598 | HCF173 "high chlorophyll fluor | 0.277 | 0.142 | 0.360 | 6.6e-05 | |
| TAIR|locus:2185228 | 253 | AT5G02240 [Arabidopsis thalian | 0.415 | 0.501 | 0.259 | 9.4e-05 |
| TAIR|locus:2030270 AT1G72640 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 902 (322.6 bits), Expect = 1.9e-90, P = 1.9e-90
Identities = 182/308 (59%), Positives = 223/308 (72%)
Query: 1 MAGTAFPSTLVIQTSHISFTSQKKSFELANPSSLIFNFEKKVLFRCSAKKKISFVDQILD 60
MAGT+ PS L+ Q + F+S + E AN + K+ L RC AKKKISFVDQILD
Sbjct: 1 MAGTSLPSCLLSQGPSLLFSSSNQDSE-ANKCRIGITSGKRCLVRCFAKKKISFVDQILD 59
Query: 61 YIEGGPKLRKWYGAPDLLPKDGS-----NXXXXXXXXXXXXXARDAVLVTDGDSDIGQMV 115
YIEGGPKLRKWYGAP+L PKDGS + +D V VTDGDSD+GQM+
Sbjct: 60 YIEGGPKLRKWYGAPELRPKDGSLSGDDDEFEAEEKEDDLDGEKDVVFVTDGDSDLGQMI 119
Query: 116 ILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEGFI 175
IL LIVK TR+KALVKDKR A+E+FG+YVE GDAS+++FLK A +GV ++I P+EGF+
Sbjct: 120 ILQLIVKGTRVKALVKDKRKALEAFGSYVELTTGDASDERFLKKAFKGVGAVISPTEGFL 179
Query: 176 SNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMASGIPYTIIRTGV 235
S S +GV+H +LLSQLSVY SGGIQA+M A+KLAEQDE+ ++S +PYTIIRTG
Sbjct: 180 SIVKSFRGVKHAVLLSQLSVYESSGGIQAMMNSKAKKLAEQDENAAISSNVPYTIIRTGK 239
Query: 236 LQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVVNGEEKVSDWKK 295
L+N+PGG QGF F G AA GS+SKEDAA ICVEAL IP TGLIFEV NGEE VSDW+
Sbjct: 240 LENSPGGSQGFNFSAGAAAKGSISKEDAARICVEALSVIPPTGLIFEVTNGEEVVSDWEG 299
Query: 296 CFSRLMEK 303
++M++
Sbjct: 300 QLMKVMQR 307
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| TAIR|locus:2015651 HCF173 "high chlorophyll fluorescence phenotype 173" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 125 (49.1 bits), Expect = 6.6e-05, P = 6.6e-05
Identities = 31/86 (36%), Positives = 44/86 (51%)
Query: 198 GSGGIQALMKGNARKLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGS 257
GSG ++A + K E L SG+ YTIIR G L+ PGG++ F++G +
Sbjct: 476 GSG-VEANRREQVLKAKRAGEDSLRRSGLGYTIIRPGPLKEEPGGQRALIFDQGNRISQG 534
Query: 258 LSKEDAAFICVEALESIPQTGLIFEV 283
+S D A ICV+AL F+V
Sbjct: 535 ISCADVADICVKALHDSTARNKSFDV 560
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| TAIR|locus:2185228 AT5G02240 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 104 (41.7 bits), Expect = 9.4e-05, Sum P(2) = 9.4e-05
Identities = 35/135 (25%), Positives = 60/135 (44%)
Query: 177 NAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMASGIPYTIIRTGVL 236
+A + GV+H++++ + + L GN + E L SG PYTIIR G L
Sbjct: 118 DAAKVAGVKHIVVVGSMGGTNPDHPLNKLGNGNILVWKRKAEQYLADSGTPYTIIRAGGL 177
Query: 237 QNTPGGKQ----GFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVVNGEEKVS- 291
+ GG + G E ++ + D A +C++AL F++ + E S
Sbjct: 178 LDKEGGVRELLVGKDDELLQTDTKTVPRADVAEVCIQALLFEEAKNKAFDLGSKPEGTST 237
Query: 292 ---DWKKCFSRLMEK 303
D+K FS++ +
Sbjct: 238 PTKDFKALFSQVTSR 252
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
| Your Input: |  |
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 | gw1.III.2689.1 | hypothetical protein (262 aa) | |||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sorry, there are no predicted associations at the current settings. | |||||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 306 | |||
| pfam13460 | 182 | pfam13460, NAD_binding_10, NADH(P)-binding | 1e-15 | |
| cd05243 | 203 | cd05243, SDR_a5, atypical (a) SDRs, subgroup 5 | 2e-15 | |
| cd05269 | 272 | cd05269, TMR_SDR_a, triphenylmethane reductase (TM | 1e-06 | |
| COG0702 | 275 | COG0702, COG0702, Predicted nucleoside-diphosphate | 1e-06 | |
| cd05251 | 242 | cd05251, NmrA_like_SDR_a, NmrA (a transcriptional | 8e-06 | |
| cd05226 | 176 | cd05226, SDR_e_a, Extended (e) and atypical (a) SD | 2e-04 | |
| cd05231 | 259 | cd05231, NmrA_TMR_like_1_SDR_a, NmrA (a transcript | 0.002 | |
| PLN00141 | 251 | PLN00141, PLN00141, Tic62-NAD(P)-related group II | 0.003 |
| >gnl|CDD|222146 pfam13460, NAD_binding_10, NADH(P)-binding | Back alignment and domain information |
|---|
Score = 73.1 bits (180), Expect = 1e-15
Identities = 44/185 (23%), Positives = 79/185 (42%), Gaps = 18/185 (9%)
Query: 102 VLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTAL 161
+ V G+ ++ L+ + ++ AL ++ A T V+ D + L AL
Sbjct: 1 IAVIGATGKTGRRLVKELLARGHQVTALSRNPSKAPAPGVTPVQ---KDLFDLADLAEAL 57
Query: 162 RGVRSIIC--PSEGF-------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGN--- 209
GV +++ + + +A + GV+ ++++S +YR G L
Sbjct: 58 AGVDAVVDAFGARPDDSDGVKHLLDAAARAGVRRIVVVSAAGLYRDEPGTFRLDDAPLFP 117
Query: 210 --ARKLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFIC 267
AR A +E +L ASG+ +TI+R G L + G E A S+S+ D A
Sbjct: 118 PYARAKAAAEE-LLRASGLDWTIVRPGALFDEEGETYEIGTEGDPAGESSISRADVAAAL 176
Query: 268 VEALE 272
++ LE
Sbjct: 177 LDELE 181
|
Length = 182 |
| >gnl|CDD|187554 cd05243, SDR_a5, atypical (a) SDRs, subgroup 5 | Back alignment and domain information |
|---|
Score = 73.0 bits (180), Expect = 2e-15
Identities = 54/206 (26%), Positives = 96/206 (46%), Gaps = 24/206 (11%)
Query: 102 VLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTAL 161
VLV +G+ V+ L+ + +++ALV+D A + E + GD ++ + L AL
Sbjct: 2 VLVVGATGKVGRHVVRELLDRGYQVRALVRDPSQAEKLEAAGAEVVVGDLTDAESLAAAL 61
Query: 162 RGVRSIIC-----PSEG----FISNAGSLK--------GVQHVILLSQLSVYRGSGGIQA 204
G+ ++I G + G++ GV+ +L+S + + S ++A
Sbjct: 62 EGIDAVISAAGSGGKGGPRTEAVDYDGNINLIDAAKKAGVKRFVLVSSIGADKPSHPLEA 121
Query: 205 LMKG-NARKLAEQDESMLMASGIPYTIIR-TGVLQNTPGGKQGFQFEEGCAANGSLSKED 262
L +A++ AE L ASG+ YTI+R G+ + G + +G +G +S+ D
Sbjct: 122 LGPYLDAKRKAED---YLRASGLDYTIVRPGGLTDDPAGTGRVVLGGDGTRLDGPISRAD 178
Query: 263 AAFICVEALESIPQT-GLIFEVVNGE 287
A + EAL P G FE+ G+
Sbjct: 179 VAEVLAEAL-DTPAAIGKTFELGGGD 203
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This subgroup contains atypical SDRs, some of which are identified as putative NAD(P)-dependent epimerases, one as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif that is very similar to the extended SDRs, GXXGXXG, and binds NADP. Generally, this subgroup has poor conservation of the active site tetrad; however, individual sequences do contain matches to the YXXXK active site motif, the upstream Ser, and there is a highly conserved Asp in place of the usual active site Asn throughout the subgroup. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 203 |
| >gnl|CDD|187578 cd05269, TMR_SDR_a, triphenylmethane reductase (TMR)-like proteins, NMRa-like, atypical (a) SDRs | Back alignment and domain information |
|---|
Score = 48.4 bits (116), Expect = 1e-06
Identities = 51/172 (29%), Positives = 72/172 (41%), Gaps = 23/172 (13%)
Query: 103 LVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR 162
LVT +G V+ L+ K + ALV++ A VE GD + + L+ A
Sbjct: 2 LVTGATGKLGTAVVELLLAKVASVVALVRNPEKAKAFAADGVEVRQGDYDDPETLERAFE 61
Query: 163 GVRS--IICPS---------EGFISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR 211
GV +I PS + FI +A GV+H++ LS SG + AR
Sbjct: 62 GVDRLLLISPSDLEDRIQQHKNFI-DAAKQAGVKHIVYLS------ASGADEDSPFLLAR 114
Query: 212 KLAEQDESMLMASGIPYTIIRTGV-LQNTPGGKQGFQFEE---GCAANGSLS 259
E L ASGIPYTI+R G + N E G A +G ++
Sbjct: 115 DHG-ATEKYLEASGIPYTILRPGWFMDNLLEFLPSILEEGTIYGPAGDGKVA 165
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TMR is an atypical NADP-binding protein of the SDR family. It lacks the active site residues of the SDRs but has a glycine rich NAD(P)-binding motif that matches the extended SDRs. Proteins in this subgroup however, are more similar in length to the classical SDRs. TMR was identified as a reducer of triphenylmethane dyes, important environmental pollutants. This subgroup also includes Escherichia coli NADPH-dependent quinine oxidoreductase (QOR2), which catalyzes two-electron reduction of quinone; but is unlikely to play a major role in protecting against quinone cytotoxicity. Atypical SDRs are distinct from classical SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 272 |
| >gnl|CDD|223774 COG0702, COG0702, Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 48.4 bits (115), Expect = 1e-06
Identities = 53/229 (23%), Positives = 84/229 (36%), Gaps = 33/229 (14%)
Query: 101 AVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA 160
+LVT +G V+ L+ + ++A V++ A G VE + GD + K L
Sbjct: 2 KILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALAGG-VEVVLGDLRDPKSLVAG 60
Query: 161 LRGV------RSIICPSEGFISNAGSL---------KGVQHVILLSQLSVYRGSGGIQAL 205
+GV ++ S+ F + + GV+H + LS L S A
Sbjct: 61 AKGVDGVLLISGLLDGSDAFRAVQVTAVVRAAEAAGAGVKHGVSLSVLGADAASPSALAR 120
Query: 206 MKGNARKLAEQDESMLMASGIPYTIIR-TGVLQNTPGGKQGFQFEEG----CAANGSLS- 259
K E+ L +SGIPYT +R G G LS
Sbjct: 121 AKAAV-------EAALRSSGIPYTTLRRAAFYLGAGAAFIEAAEAAGLPVIPRGIGRLSP 173
Query: 260 --KEDAAFICVEALESIPQTGLIFEVVNGEEKVSDWKKCFSRLMEKTGK 306
+D A AL++ G +E+ G E ++ + S L G+
Sbjct: 174 IAVDDVAEALAAALDAPATAGRTYELA-GPEALTLA-ELASGLDYTIGR 220
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Length = 275 |
| >gnl|CDD|187561 cd05251, NmrA_like_SDR_a, NmrA (a transcriptional regulator) and HSCARG (an NADPH sensor) like proteins, atypical (a) SDRs | Back alignment and domain information |
|---|
Score = 45.7 bits (109), Expect = 8e-06
Identities = 40/187 (21%), Positives = 70/187 (37%), Gaps = 29/187 (15%)
Query: 102 VLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRN----AMESFGTYVESMAGDASNKKF 156
+LV G V+ +L+ +++AL +D + A+ + G VE + GD + +
Sbjct: 1 ILVFGATGKQGGSVVRALLKDPGFKVRALTRDPSSPAAKALAAPG--VEVVQGDLDDPES 58
Query: 157 LKTALRGVRSIIC---PSEGFIS----------NAGSLKGVQHVILLSQLSVYRGSGGI- 202
L+ AL+GV + E +A GVQH + S V + + +
Sbjct: 59 LEAALKGVYGVFLVTDFWEAGGEDEIAQGKNVVDAAKRAGVQHFVFSSVPDVEKLTLAVP 118
Query: 203 QALMKGNARKLAEQDESMLMASGIPYTIIRTGV-LQNTPGGKQGFQFEEGCAANGSLSKE 261
K E + ASG+P TI+R ++N + E+G
Sbjct: 119 HFDSKAEV-------EEYIRASGLPATILRPAFFMENFLTPPAPQKMEDGTLTLVLPLDP 171
Query: 262 DAAFICV 268
D +
Sbjct: 172 DTKLPMI 178
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NmrA and HSCARG like proteins. NmrA is a negative transcriptional regulator of various fungi, involved in the post-translational modulation of the GATA-type transcription factor AreA. NmrA lacks the canonical GXXGXXG NAD-binding motif and has altered residues at the catalytic triad, including a Met instead of the critical Tyr residue. NmrA may bind nucleotides but appears to lack any dehydrogenase activity. HSCARG has been identified as a putative NADP-sensing molecule, and redistributes and restructures in response to NADPH/NADP ratios. Like NmrA, it lacks most of the active site residues of the SDR family, but has an NAD(P)-binding motif similar to the extended SDR family, GXXGXXG. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Atypical SDRs are distinct from classical SDRs. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 242 |
| >gnl|CDD|187537 cd05226, SDR_e_a, Extended (e) and atypical (a) SDRs | Back alignment and domain information |
|---|
Score = 41.2 bits (97), Expect = 2e-04
Identities = 33/152 (21%), Positives = 61/152 (40%), Gaps = 17/152 (11%)
Query: 102 VLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTAL 161
+L+ IG+ + L+ + + LV++ + + V + GD + L A+
Sbjct: 1 ILILGATGFIGRALARELLEQGHEVTLLVRNTKRLSKEDQEPVAVVEGDLRDLDSLSDAV 60
Query: 162 RGVRSIIC--------------PSEGFISNAGSLK--GVQHVILLSQLSVYRGSGGIQA- 204
+GV +I EG + + K GV+H I +S L Y
Sbjct: 61 QGVDVVIHLAGAPRDTRDFCEVDVEGTRNVLEAAKEAGVKHFIFISSLGAYGDLHEETEP 120
Query: 205 LMKGNARKLAEQDESMLMASGIPYTIIRTGVL 236
+ + E++L + +PYTI+R GV+
Sbjct: 121 SPSSPYLAVKAKTEAVLREASLPYTIVRPGVI 152
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Extended or atypical short-chain dehydrogenases/reductases (SDRs, aka tyrosine-dependent oxidoreductases) are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 176 |
| >gnl|CDD|187542 cd05231, NmrA_TMR_like_1_SDR_a, NmrA (a transcriptional regulator) and triphenylmethane reductase (TMR) like proteins, subgroup 1, atypical (a) SDRs | Back alignment and domain information |
|---|
Score = 38.8 bits (91), Expect = 0.002
Identities = 47/227 (20%), Positives = 84/227 (37%), Gaps = 40/227 (17%)
Query: 102 VLVTDGDSDIGQMVILSLIVKRTRIKALVKD--KRNAMESFGTYVESMAGDASNKKFLKT 159
+LVT IG V +L+ ++ALV+ + A+ + G E + GD + L
Sbjct: 1 ILVTGATGRIGSKVATTLLEAGRPVRALVRSDERAAALAARG--AEVVVGDLDDPAVLAA 58
Query: 160 ALRGVRSI---ICPSEGFISNAGSLK------------GVQHVILLSQLSVYRGSGGIQA 204
AL GV ++ P+ + G ++ GV+ V+ LS + S
Sbjct: 59 ALAGVDAVFFLAPPAPTADARPGYVQAAEAFASALREAGVKRVVNLSSVGADPESP---- 114
Query: 205 LMKGNARKLAEQDESMLMASGIPYTIIRTG-VLQNT-----PGGKQG--FQFEEGCAANG 256
G R ++ +L +G+P +R ++N K G G
Sbjct: 115 --SGLIRGHWLMEQ-VLNWAGLPVVHLRPAWFMENLLSQAPSIRKAGVLALPFPGDGRLP 171
Query: 257 SLSKEDAAFICVEALESIPQTGLIFEVVN--GEEKVS--DWKKCFSR 299
++ +D A + + L P+ V G E ++ + SR
Sbjct: 172 PIATDDIARVAAKLLLD-PEWH-GHRVYELTGPEDLTMNEIAAALSR 216
|
Atypical SDRs related to NMRa, TMR, and HSCARG (an NADPH sensor). This subgroup resembles the SDRs and has a partially conserved characteristic [ST]GXXGXXG NAD-binding motif, but lacks the conserved active site residues. NmrA is a negative transcriptional regulator of various fungi, involved in the post-translational modulation of the GATA-type transcription factor AreA. NmrA lacks the canonical GXXGXXG NAD-binding motif and has altered residues at the catalytic triad, including a Met instead of the critical Tyr residue. NmrA may bind nucleotides but appears to lack any dehydrogenase activity. HSCARG has been identified as a putative NADP-sensing molecule, and redistributes and restructures in response to NADPH/NADP ratios. Like NmrA, it lacks most of the active site residues of the SDR family, but has an NAD(P)-binding motif similar to the extended SDR family, GXXGXXG. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Atypical SDRs are distinct from classical SDRs. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 259 |
| >gnl|CDD|215072 PLN00141, PLN00141, Tic62-NAD(P)-related group II protein; Provisional | Back alignment and domain information |
|---|
Score = 37.9 bits (88), Expect = 0.003
Identities = 55/218 (25%), Positives = 84/218 (38%), Gaps = 33/218 (15%)
Query: 85 EEDEEKEDEFPEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF--GT 142
E E E++ V V G+ ++ L+ K +KA V+D A S
Sbjct: 3 EGAEASEEDAENVKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLPQDP 62
Query: 143 YVESMAGDASN--KKFLKTALRGVRSIICPSEGF-----------ISNAGSLK------- 182
++ + D + K ++ ++IC + GF + N G++
Sbjct: 63 SLQIVRADVTEGSDKLVEAIGDDSDAVICAT-GFRRSFDPFAPWKVDNFGTVNLVEACRK 121
Query: 183 -GVQHVILLSQLSVYRGSGGIQALMKG----NARKLAE----QDESMLMASGIPYTIIRT 233
GV IL+S + V G+ Q L N L Q E + SGI YTI+R
Sbjct: 122 AGVTRFILVSSILV-NGAAMGQILNPAYIFLNLFGLTLVAKLQAEKYIRKSGINYTIVRP 180
Query: 234 GVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEAL 271
G L N P E GS+S++ A + VEAL
Sbjct: 181 GGLTNDPPTGNIVMEPEDTLYEGSISRDQVAEVAVEAL 218
|
Length = 251 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 306 | |||
| CHL00194 | 317 | ycf39 Ycf39; Provisional | 99.94 | |
| PF13460 | 183 | NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X | 99.92 | |
| PLN00141 | 251 | Tic62-NAD(P)-related group II protein; Provisional | 99.92 | |
| TIGR03649 | 285 | ergot_EASG ergot alkaloid biosynthesis protein, AF | 99.92 | |
| KOG1502 | 327 | consensus Flavonol reductase/cinnamoyl-CoA reducta | 99.9 | |
| PLN02657 | 390 | 3,8-divinyl protochlorophyllide a 8-vinyl reductas | 99.9 | |
| PLN03209 | 576 | translocon at the inner envelope of chloroplast su | 99.9 | |
| PLN02427 | 386 | UDP-apiose/xylose synthase | 99.89 | |
| PF05368 | 233 | NmrA: NmrA-like family; InterPro: IPR008030 NmrA i | 99.89 | |
| PRK15181 | 348 | Vi polysaccharide biosynthesis protein TviC; Provi | 99.89 | |
| PF01073 | 280 | 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso | 99.88 | |
| PLN02214 | 342 | cinnamoyl-CoA reductase | 99.88 | |
| PLN00016 | 378 | RNA-binding protein; Provisional | 99.88 | |
| PLN02986 | 322 | cinnamyl-alcohol dehydrogenase family protein | 99.87 | |
| PLN02695 | 370 | GDP-D-mannose-3',5'-epimerase | 99.87 | |
| COG1087 | 329 | GalE UDP-glucose 4-epimerase [Cell envelope biogen | 99.86 | |
| PRK11908 | 347 | NAD-dependent epimerase/dehydratase family protein | 99.86 | |
| PLN02662 | 322 | cinnamyl-alcohol dehydrogenase family protein | 99.86 | |
| COG1086 | 588 | Predicted nucleoside-diphosphate sugar epimerases | 99.85 | |
| PLN02572 | 442 | UDP-sulfoquinovose synthase | 99.85 | |
| TIGR03466 | 328 | HpnA hopanoid-associated sugar epimerase. The sequ | 99.85 | |
| PLN02650 | 351 | dihydroflavonol-4-reductase | 99.85 | |
| PLN02989 | 325 | cinnamyl-alcohol dehydrogenase family protein | 99.84 | |
| PRK10217 | 355 | dTDP-glucose 4,6-dehydratase; Provisional | 99.84 | |
| PLN02583 | 297 | cinnamoyl-CoA reductase | 99.84 | |
| PRK08125 | 660 | bifunctional UDP-glucuronic acid decarboxylase/UDP | 99.83 | |
| TIGR03589 | 324 | PseB UDP-N-acetylglucosamine 4,6-dehydratase. This | 99.83 | |
| TIGR01214 | 287 | rmlD dTDP-4-dehydrorhamnose reductase. This enzyme | 99.83 | |
| PLN00198 | 338 | anthocyanidin reductase; Provisional | 99.83 | |
| TIGR02622 | 349 | CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member | 99.83 | |
| TIGR01472 | 343 | gmd GDP-mannose 4,6-dehydratase. Excluded from thi | 99.82 | |
| PLN02896 | 353 | cinnamyl-alcohol dehydrogenase | 99.82 | |
| PLN02686 | 367 | cinnamoyl-CoA reductase | 99.82 | |
| PF01370 | 236 | Epimerase: NAD dependent epimerase/dehydratase fam | 99.82 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 99.82 | |
| PRK05865 | 854 | hypothetical protein; Provisional | 99.81 | |
| TIGR01181 | 317 | dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This | 99.81 | |
| COG0451 | 314 | WcaG Nucleoside-diphosphate-sugar epimerases [Cell | 99.81 | |
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 99.81 | |
| PRK10675 | 338 | UDP-galactose-4-epimerase; Provisional | 99.8 | |
| PLN02166 | 436 | dTDP-glucose 4,6-dehydratase | 99.8 | |
| PLN02240 | 352 | UDP-glucose 4-epimerase | 99.8 | |
| PLN02206 | 442 | UDP-glucuronate decarboxylase | 99.79 | |
| PRK09987 | 299 | dTDP-4-dehydrorhamnose reductase; Provisional | 99.79 | |
| PLN02653 | 340 | GDP-mannose 4,6-dehydratase | 99.78 | |
| PF02719 | 293 | Polysacc_synt_2: Polysaccharide biosynthesis prote | 99.78 | |
| PRK10084 | 352 | dTDP-glucose 4,6 dehydratase; Provisional | 99.78 | |
| TIGR01179 | 328 | galE UDP-glucose-4-epimerase. This enzyme intercon | 99.78 | |
| TIGR01746 | 367 | Thioester-redct thioester reductase domain. It has | 99.78 | |
| PLN02996 | 491 | fatty acyl-CoA reductase | 99.77 | |
| COG0702 | 275 | Predicted nucleoside-diphosphate-sugar epimerases | 99.77 | |
| PRK11150 | 308 | rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro | 99.77 | |
| PRK12825 | 249 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.76 | |
| COG0300 | 265 | DltE Short-chain dehydrogenases of various substra | 99.76 | |
| KOG2865 | 391 | consensus NADH:ubiquinone oxidoreductase, NDUFA9/3 | 99.76 | |
| PLN02725 | 306 | GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas | 99.76 | |
| COG1088 | 340 | RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope | 99.76 | |
| TIGR01777 | 292 | yfcH conserved hypothetical protein TIGR01777. Thi | 99.75 | |
| COG2910 | 211 | Putative NADH-flavin reductase [General function p | 99.75 | |
| PRK12429 | 258 | 3-hydroxybutyrate dehydrogenase; Provisional | 99.75 | |
| TIGR02197 | 314 | heptose_epim ADP-L-glycero-D-manno-heptose-6-epime | 99.74 | |
| PRK06182 | 273 | short chain dehydrogenase; Validated | 99.73 | |
| PRK06482 | 276 | short chain dehydrogenase; Provisional | 99.73 | |
| PRK08263 | 275 | short chain dehydrogenase; Provisional | 99.73 | |
| PRK12828 | 239 | short chain dehydrogenase; Provisional | 99.73 | |
| KOG1203 | 411 | consensus Predicted dehydrogenase [Carbohydrate tr | 99.73 | |
| PRK07825 | 273 | short chain dehydrogenase; Provisional | 99.73 | |
| PRK05875 | 276 | short chain dehydrogenase; Provisional | 99.73 | |
| PRK12826 | 251 | 3-ketoacyl-(acyl-carrier-protein) reductase; Revie | 99.73 | |
| PRK13394 | 262 | 3-hydroxybutyrate dehydrogenase; Provisional | 99.73 | |
| PF04321 | 286 | RmlD_sub_bind: RmlD substrate binding domain; Inte | 99.73 | |
| COG1091 | 281 | RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo | 99.73 | |
| PRK09291 | 257 | short chain dehydrogenase; Provisional | 99.72 | |
| PRK07231 | 251 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.72 | |
| PRK05653 | 246 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.72 | |
| COG1090 | 297 | Predicted nucleoside-diphosphate sugar epimerase [ | 99.71 | |
| PRK06180 | 277 | short chain dehydrogenase; Provisional | 99.71 | |
| TIGR01963 | 255 | PHB_DH 3-hydroxybutyrate dehydrogenase. This model | 99.71 | |
| COG4221 | 246 | Short-chain alcohol dehydrogenase of unknown speci | 99.71 | |
| PRK07666 | 239 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.7 | |
| PRK09186 | 256 | flagellin modification protein A; Provisional | 99.7 | |
| PRK12320 | 699 | hypothetical protein; Provisional | 99.7 | |
| PRK06914 | 280 | short chain dehydrogenase; Provisional | 99.7 | |
| PRK06138 | 252 | short chain dehydrogenase; Provisional | 99.7 | |
| PRK08063 | 250 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.7 | |
| PRK07454 | 241 | short chain dehydrogenase; Provisional | 99.7 | |
| PRK05876 | 275 | short chain dehydrogenase; Provisional | 99.69 | |
| PRK08219 | 227 | short chain dehydrogenase; Provisional | 99.69 | |
| KOG1430 | 361 | consensus C-3 sterol dehydrogenase/3-beta-hydroxys | 99.69 | |
| PRK06179 | 270 | short chain dehydrogenase; Provisional | 99.69 | |
| PRK05993 | 277 | short chain dehydrogenase; Provisional | 99.69 | |
| PRK07904 | 253 | short chain dehydrogenase; Provisional | 99.68 | |
| PRK07806 | 248 | short chain dehydrogenase; Provisional | 99.68 | |
| PRK05557 | 248 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.68 | |
| PRK07523 | 255 | gluconate 5-dehydrogenase; Provisional | 99.68 | |
| PRK07326 | 237 | short chain dehydrogenase; Provisional | 99.68 | |
| PRK07775 | 274 | short chain dehydrogenase; Provisional | 99.67 | |
| PRK12827 | 249 | short chain dehydrogenase; Provisional | 99.67 | |
| TIGR03206 | 250 | benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr | 99.67 | |
| PRK07060 | 245 | short chain dehydrogenase; Provisional | 99.67 | |
| PRK10538 | 248 | malonic semialdehyde reductase; Provisional | 99.67 | |
| PRK12829 | 264 | short chain dehydrogenase; Provisional | 99.67 | |
| PRK07074 | 257 | short chain dehydrogenase; Provisional | 99.66 | |
| PRK06841 | 255 | short chain dehydrogenase; Provisional | 99.66 | |
| PRK12939 | 250 | short chain dehydrogenase; Provisional | 99.66 | |
| PRK12746 | 254 | short chain dehydrogenase; Provisional | 99.66 | |
| PRK07067 | 257 | sorbitol dehydrogenase; Provisional | 99.66 | |
| PRK05565 | 247 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.65 | |
| PRK07024 | 257 | short chain dehydrogenase; Provisional | 99.65 | |
| PRK05650 | 270 | short chain dehydrogenase; Provisional | 99.65 | |
| PRK12384 | 259 | sorbitol-6-phosphate dehydrogenase; Provisional | 99.65 | |
| PRK08339 | 263 | short chain dehydrogenase; Provisional | 99.65 | |
| PRK08017 | 256 | oxidoreductase; Provisional | 99.64 | |
| PRK08628 | 258 | short chain dehydrogenase; Provisional | 99.64 | |
| PRK12935 | 247 | acetoacetyl-CoA reductase; Provisional | 99.64 | |
| PRK12823 | 260 | benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat | 99.64 | |
| PRK12936 | 245 | 3-ketoacyl-(acyl-carrier-protein) reductase NodG; | 99.64 | |
| TIGR01832 | 248 | kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod | 99.64 | |
| PRK08220 | 252 | 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | 99.64 | |
| PRK07478 | 254 | short chain dehydrogenase; Provisional | 99.63 | |
| PRK08265 | 261 | short chain dehydrogenase; Provisional | 99.63 | |
| PRK07063 | 260 | short chain dehydrogenase; Provisional | 99.63 | |
| PRK06935 | 258 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 99.63 | |
| PRK12824 | 245 | acetoacetyl-CoA reductase; Provisional | 99.63 | |
| PRK07577 | 234 | short chain dehydrogenase; Provisional | 99.63 | |
| PRK12745 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.63 | |
| PRK07102 | 243 | short chain dehydrogenase; Provisional | 99.63 | |
| PRK07109 | 334 | short chain dehydrogenase; Provisional | 99.63 | |
| PRK05866 | 293 | short chain dehydrogenase; Provisional | 99.63 | |
| PRK08267 | 260 | short chain dehydrogenase; Provisional | 99.63 | |
| PRK08264 | 238 | short chain dehydrogenase; Validated | 99.63 | |
| PRK06124 | 256 | gluconate 5-dehydrogenase; Provisional | 99.62 | |
| PLN02503 | 605 | fatty acyl-CoA reductase 2 | 99.62 | |
| PRK06523 | 260 | short chain dehydrogenase; Provisional | 99.62 | |
| PRK06128 | 300 | oxidoreductase; Provisional | 99.62 | |
| PRK12481 | 251 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 99.62 | |
| PRK07774 | 250 | short chain dehydrogenase; Provisional | 99.61 | |
| PRK08085 | 254 | gluconate 5-dehydrogenase; Provisional | 99.61 | |
| PRK07890 | 258 | short chain dehydrogenase; Provisional | 99.61 | |
| PF07993 | 249 | NAD_binding_4: Male sterility protein; InterPro: I | 99.61 | |
| PRK06077 | 252 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.61 | |
| PRK06114 | 254 | short chain dehydrogenase; Provisional | 99.61 | |
| PRK06181 | 263 | short chain dehydrogenase; Provisional | 99.61 | |
| PRK08251 | 248 | short chain dehydrogenase; Provisional | 99.61 | |
| KOG1371 | 343 | consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo | 99.61 | |
| PRK08642 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.6 | |
| PRK06463 | 255 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.6 | |
| PRK06398 | 258 | aldose dehydrogenase; Validated | 99.6 | |
| PRK05786 | 238 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.6 | |
| PRK08643 | 256 | acetoin reductase; Validated | 99.6 | |
| PRK07097 | 265 | gluconate 5-dehydrogenase; Provisional | 99.6 | |
| TIGR01829 | 242 | AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy | 99.59 | |
| PRK07062 | 265 | short chain dehydrogenase; Provisional | 99.59 | |
| PRK06139 | 330 | short chain dehydrogenase; Provisional | 99.59 | |
| PRK07856 | 252 | short chain dehydrogenase; Provisional | 99.59 | |
| PRK05867 | 253 | short chain dehydrogenase; Provisional | 99.59 | |
| PRK08324 | 681 | short chain dehydrogenase; Validated | 99.59 | |
| PRK06550 | 235 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.59 | |
| PRK08277 | 278 | D-mannonate oxidoreductase; Provisional | 99.59 | |
| PRK12743 | 256 | oxidoreductase; Provisional | 99.59 | |
| PRK08589 | 272 | short chain dehydrogenase; Validated | 99.59 | |
| PRK06172 | 253 | short chain dehydrogenase; Provisional | 99.59 | |
| PRK12937 | 245 | short chain dehydrogenase; Provisional | 99.59 | |
| PLN02253 | 280 | xanthoxin dehydrogenase | 99.58 | |
| PRK06101 | 240 | short chain dehydrogenase; Provisional | 99.58 | |
| PRK06483 | 236 | dihydromonapterin reductase; Provisional | 99.58 | |
| PRK09072 | 263 | short chain dehydrogenase; Provisional | 99.58 | |
| PRK07035 | 252 | short chain dehydrogenase; Provisional | 99.58 | |
| PRK09134 | 258 | short chain dehydrogenase; Provisional | 99.58 | |
| PRK05693 | 274 | short chain dehydrogenase; Provisional | 99.58 | |
| PRK08416 | 260 | 7-alpha-hydroxysteroid dehydrogenase; Provisional | 99.58 | |
| PRK06701 | 290 | short chain dehydrogenase; Provisional | 99.58 | |
| PRK09135 | 249 | pteridine reductase; Provisional | 99.58 | |
| TIGR01830 | 239 | 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re | 99.57 | |
| PRK12938 | 246 | acetyacetyl-CoA reductase; Provisional | 99.57 | |
| PRK05717 | 255 | oxidoreductase; Validated | 99.57 | |
| PRK09242 | 257 | tropinone reductase; Provisional | 99.57 | |
| PRK08213 | 259 | gluconate 5-dehydrogenase; Provisional | 99.57 | |
| PRK06947 | 248 | glucose-1-dehydrogenase; Provisional | 99.57 | |
| PLN02778 | 298 | 3,5-epimerase/4-reductase | 99.57 | |
| PRK07814 | 263 | short chain dehydrogenase; Provisional | 99.56 | |
| PRK07985 | 294 | oxidoreductase; Provisional | 99.56 | |
| KOG1429 | 350 | consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro | 99.56 | |
| PRK07041 | 230 | short chain dehydrogenase; Provisional | 99.56 | |
| PRK08340 | 259 | glucose-1-dehydrogenase; Provisional | 99.56 | |
| PRK07576 | 264 | short chain dehydrogenase; Provisional | 99.56 | |
| PRK06949 | 258 | short chain dehydrogenase; Provisional | 99.56 | |
| PRK06194 | 287 | hypothetical protein; Provisional | 99.56 | |
| PRK06196 | 315 | oxidoreductase; Provisional | 99.55 | |
| PRK12748 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.55 | |
| PRK06113 | 255 | 7-alpha-hydroxysteroid dehydrogenase; Validated | 99.55 | |
| PRK06924 | 251 | short chain dehydrogenase; Provisional | 99.55 | |
| PRK08993 | 253 | 2-deoxy-D-gluconate 3-dehydrogenase; Validated | 99.54 | |
| PRK07023 | 243 | short chain dehydrogenase; Provisional | 99.54 | |
| PRK06057 | 255 | short chain dehydrogenase; Provisional | 99.54 | |
| PRK12742 | 237 | oxidoreductase; Provisional | 99.54 | |
| PRK08217 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.54 | |
| TIGR03443 | 1389 | alpha_am_amid L-aminoadipate-semialdehyde dehydrog | 99.54 | |
| PRK06123 | 248 | short chain dehydrogenase; Provisional | 99.53 | |
| PRK07832 | 272 | short chain dehydrogenase; Provisional | 99.53 | |
| PRK08936 | 261 | glucose-1-dehydrogenase; Provisional | 99.53 | |
| PRK06171 | 266 | sorbitol-6-phosphate 2-dehydrogenase; Provisional | 99.53 | |
| TIGR02415 | 254 | 23BDH acetoin reductases. One member of this famil | 99.53 | |
| PRK06500 | 249 | short chain dehydrogenase; Provisional | 99.53 | |
| PRK09730 | 247 | putative NAD(P)-binding oxidoreductase; Provisiona | 99.52 | |
| PRK06200 | 263 | 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog | 99.52 | |
| PRK06125 | 259 | short chain dehydrogenase; Provisional | 99.52 | |
| PRK07677 | 252 | short chain dehydrogenase; Provisional | 99.52 | |
| PRK12747 | 252 | short chain dehydrogenase; Provisional | 99.51 | |
| COG3320 | 382 | Putative dehydrogenase domain of multifunctional n | 99.51 | |
| PRK07069 | 251 | short chain dehydrogenase; Validated | 99.51 | |
| PRK08278 | 273 | short chain dehydrogenase; Provisional | 99.51 | |
| PRK08226 | 263 | short chain dehydrogenase; Provisional | 99.51 | |
| TIGR02632 | 676 | RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc | 99.51 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 99.5 | |
| PRK06198 | 260 | short chain dehydrogenase; Provisional | 99.5 | |
| PRK07831 | 262 | short chain dehydrogenase; Provisional | 99.5 | |
| PRK12859 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.49 | |
| TIGR03325 | 262 | BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro | 99.49 | |
| PRK06079 | 252 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.49 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 99.49 | |
| PRK05872 | 296 | short chain dehydrogenase; Provisional | 99.49 | |
| PRK05855 | 582 | short chain dehydrogenase; Validated | 99.49 | |
| KOG1205 | 282 | consensus Predicted dehydrogenase [Secondary metab | 99.47 | |
| TIGR01831 | 239 | fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas | 99.47 | |
| PRK08703 | 239 | short chain dehydrogenase; Provisional | 99.47 | |
| PLN02780 | 320 | ketoreductase/ oxidoreductase | 99.46 | |
| PRK12744 | 257 | short chain dehydrogenase; Provisional | 99.46 | |
| PRK07791 | 286 | short chain dehydrogenase; Provisional | 99.46 | |
| PRK08945 | 247 | putative oxoacyl-(acyl carrier protein) reductase; | 99.46 | |
| PRK05599 | 246 | hypothetical protein; Provisional | 99.46 | |
| PRK07792 | 306 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.46 | |
| PRK07578 | 199 | short chain dehydrogenase; Provisional | 99.46 | |
| PRK12367 | 245 | short chain dehydrogenase; Provisional | 99.44 | |
| KOG0747 | 331 | consensus Putative NAD+-dependent epimerases [Carb | 99.43 | |
| PRK08415 | 274 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.43 | |
| PRK05884 | 223 | short chain dehydrogenase; Provisional | 99.43 | |
| PRK06505 | 271 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.43 | |
| PRK08594 | 257 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.43 | |
| PRK06940 | 275 | short chain dehydrogenase; Provisional | 99.42 | |
| PRK07370 | 258 | enoyl-(acyl carrier protein) reductase; Validated | 99.42 | |
| PRK08690 | 261 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.42 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 99.41 | |
| PRK06953 | 222 | short chain dehydrogenase; Provisional | 99.41 | |
| PRK06197 | 306 | short chain dehydrogenase; Provisional | 99.41 | |
| PRK07533 | 258 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.4 | |
| PRK09009 | 235 | C factor cell-cell signaling protein; Provisional | 99.39 | |
| PRK06603 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.38 | |
| KOG1201 | 300 | consensus Hydroxysteroid 17-beta dehydrogenase 11 | 99.38 | |
| TIGR01500 | 256 | sepiapter_red sepiapterin reductase. This model de | 99.38 | |
| PRK08159 | 272 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.37 | |
| PRK07453 | 322 | protochlorophyllide oxidoreductase; Validated | 99.36 | |
| TIGR02685 | 267 | pter_reduc_Leis pteridine reductase. Pteridine red | 99.36 | |
| PRK08261 | 450 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.36 | |
| PRK08862 | 227 | short chain dehydrogenase; Provisional | 99.35 | |
| PRK06997 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.34 | |
| PRK07984 | 262 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.34 | |
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 99.34 | |
| TIGR01289 | 314 | LPOR light-dependent protochlorophyllide reductase | 99.32 | |
| PRK08177 | 225 | short chain dehydrogenase; Provisional | 99.31 | |
| PRK07889 | 256 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.31 | |
| PRK08303 | 305 | short chain dehydrogenase; Provisional | 99.31 | |
| PRK07424 | 406 | bifunctional sterol desaturase/short chain dehydro | 99.3 | |
| PRK05854 | 313 | short chain dehydrogenase; Provisional | 99.3 | |
| KOG4288 | 283 | consensus Predicted oxidoreductase [General functi | 99.3 | |
| smart00822 | 180 | PKS_KR This enzymatic domain is part of bacterial | 99.24 | |
| KOG1221 | 467 | consensus Acyl-CoA reductase [Lipid transport and | 99.23 | |
| KOG4039 | 238 | consensus Serine/threonine kinase TIP30/CC3 [Signa | 99.23 | |
| PLN00015 | 308 | protochlorophyllide reductase | 99.21 | |
| KOG1200 | 256 | consensus Mitochondrial/plastidial beta-ketoacyl-A | 99.19 | |
| KOG1014 | 312 | consensus 17 beta-hydroxysteroid dehydrogenase typ | 99.19 | |
| KOG1431 | 315 | consensus GDP-L-fucose synthetase [Carbohydrate tr | 99.18 | |
| KOG1210 | 331 | consensus Predicted 3-ketosphinganine reductase [S | 99.17 | |
| KOG0725 | 270 | consensus Reductases with broad range of substrate | 99.17 | |
| PLN02730 | 303 | enoyl-[acyl-carrier-protein] reductase | 99.15 | |
| PF00106 | 167 | adh_short: short chain dehydrogenase alcohol dehyd | 99.08 | |
| PF08659 | 181 | KR: KR domain; InterPro: IPR013968 This domain is | 99.08 | |
| KOG4169 | 261 | consensus 15-hydroxyprostaglandin dehydrogenase an | 99.05 | |
| PF13561 | 241 | adh_short_C2: Enoyl-(Acyl carrier protein) reducta | 99.03 | |
| KOG1208 | 314 | consensus Dehydrogenases with different specificit | 99.02 | |
| KOG1610 | 322 | consensus Corticosteroid 11-beta-dehydrogenase and | 99.02 | |
| KOG1207 | 245 | consensus Diacetyl reductase/L-xylulose reductase | 99.0 | |
| COG1089 | 345 | Gmd GDP-D-mannose dehydratase [Cell envelope bioge | 98.92 | |
| COG1028 | 251 | FabG Dehydrogenases with different specificities ( | 98.92 | |
| PRK08309 | 177 | short chain dehydrogenase; Provisional | 98.92 | |
| KOG1611 | 249 | consensus Predicted short chain-type dehydrogenase | 98.91 | |
| PRK06300 | 299 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.88 | |
| COG3967 | 245 | DltE Short-chain dehydrogenase involved in D-alani | 98.88 | |
| KOG1209 | 289 | consensus 1-Acyl dihydroxyacetone phosphate reduct | 98.86 | |
| PRK12428 | 241 | 3-alpha-hydroxysteroid dehydrogenase; Provisional | 98.81 | |
| TIGR02813 | 2582 | omega_3_PfaA polyketide-type polyunsaturated fatty | 98.69 | |
| PRK06720 | 169 | hypothetical protein; Provisional | 98.67 | |
| COG1748 | 389 | LYS9 Saccharopine dehydrogenase and related protei | 98.58 | |
| cd01078 | 194 | NAD_bind_H4MPT_DH NADP binding domain of methylene | 98.41 | |
| KOG2774 | 366 | consensus NAD dependent epimerase [General functio | 98.3 | |
| PF03435 | 386 | Saccharop_dh: Saccharopine dehydrogenase ; InterPr | 98.3 | |
| KOG1478 | 341 | consensus 3-keto sterol reductase [Lipid transport | 98.21 | |
| PLN00106 | 323 | malate dehydrogenase | 98.19 | |
| COG0569 | 225 | TrkA K+ transport systems, NAD-binding component [ | 98.16 | |
| TIGR00715 | 256 | precor6x_red precorrin-6x reductase. This enzyme w | 98.13 | |
| PTZ00325 | 321 | malate dehydrogenase; Provisional | 98.12 | |
| KOG1199 | 260 | consensus Short-chain alcohol dehydrogenase/3-hydr | 98.06 | |
| PRK09620 | 229 | hypothetical protein; Provisional | 98.05 | |
| PRK12548 | 289 | shikimate 5-dehydrogenase; Provisional | 97.96 | |
| PRK06732 | 229 | phosphopantothenate--cysteine ligase; Validated | 97.95 | |
| KOG1204 | 253 | consensus Predicted dehydrogenase [Secondary metab | 97.92 | |
| PRK13656 | 398 | trans-2-enoyl-CoA reductase; Provisional | 97.9 | |
| KOG3019 | 315 | consensus Predicted nucleoside-diphosphate sugar e | 97.88 | |
| PRK14982 | 340 | acyl-ACP reductase; Provisional | 97.85 | |
| PLN02968 | 381 | Probable N-acetyl-gamma-glutamyl-phosphate reducta | 97.82 | |
| KOG2733 | 423 | consensus Uncharacterized membrane protein [Functi | 97.78 | |
| PRK14874 | 334 | aspartate-semialdehyde dehydrogenase; Provisional | 97.76 | |
| PF02254 | 116 | TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg | 97.75 | |
| PRK09496 | 453 | trkA potassium transporter peripheral membrane com | 97.75 | |
| PF01488 | 135 | Shikimate_DH: Shikimate / quinate 5-dehydrogenase; | 97.7 | |
| cd01336 | 325 | MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli | 97.69 | |
| PRK05579 | 399 | bifunctional phosphopantothenoylcysteine decarboxy | 97.68 | |
| COG0623 | 259 | FabI Enoyl-[acyl-carrier-protein] | 97.66 | |
| TIGR00521 | 390 | coaBC_dfp phosphopantothenoylcysteine decarboxylas | 97.57 | |
| PRK12475 | 338 | thiamine/molybdopterin biosynthesis MoeB-like prot | 97.54 | |
| PLN02819 | 1042 | lysine-ketoglutarate reductase/saccharopine dehydr | 97.5 | |
| PRK05086 | 312 | malate dehydrogenase; Provisional | 97.48 | |
| PRK00436 | 343 | argC N-acetyl-gamma-glutamyl-phosphate reductase; | 97.45 | |
| PF01118 | 121 | Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi | 97.43 | |
| PRK07688 | 339 | thiamine/molybdopterin biosynthesis ThiF/MoeB-like | 97.36 | |
| COG3268 | 382 | Uncharacterized conserved protein [Function unknow | 97.36 | |
| PRK05671 | 336 | aspartate-semialdehyde dehydrogenase; Reviewed | 97.34 | |
| KOG1372 | 376 | consensus GDP-mannose 4,6 dehydratase [Carbohydrat | 97.29 | |
| PRK09496 | 453 | trkA potassium transporter peripheral membrane com | 97.28 | |
| TIGR02356 | 202 | adenyl_thiF thiazole biosynthesis adenylyltransfer | 97.27 | |
| TIGR01296 | 339 | asd_B aspartate-semialdehyde dehydrogenase (peptid | 97.27 | |
| PRK04148 | 134 | hypothetical protein; Provisional | 97.27 | |
| PRK10669 | 558 | putative cation:proton antiport protein; Provision | 97.21 | |
| TIGR01850 | 346 | argC N-acetyl-gamma-glutamyl-phosphate reductase, | 97.14 | |
| PRK08664 | 349 | aspartate-semialdehyde dehydrogenase; Reviewed | 97.13 | |
| PF00899 | 135 | ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a | 97.13 | |
| PRK03659 | 601 | glutathione-regulated potassium-efflux system prot | 97.07 | |
| PF04127 | 185 | DFP: DNA / pantothenate metabolism flavoprotein; I | 97.06 | |
| TIGR02853 | 287 | spore_dpaA dipicolinic acid synthetase, A subunit. | 97.06 | |
| cd01065 | 155 | NAD_bind_Shikimate_DH NAD(P) binding domain of Shi | 97.03 | |
| PRK00258 | 278 | aroE shikimate 5-dehydrogenase; Reviewed | 96.99 | |
| TIGR02114 | 227 | coaB_strep phosphopantothenate--cysteine ligase, s | 96.97 | |
| PRK14106 | 450 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 96.94 | |
| PRK06129 | 308 | 3-hydroxyacyl-CoA dehydrogenase; Validated | 96.93 | |
| PF03446 | 163 | NAD_binding_2: NAD binding domain of 6-phosphogluc | 96.91 | |
| PRK08644 | 212 | thiamine biosynthesis protein ThiF; Provisional | 96.85 | |
| cd00704 | 323 | MDH Malate dehydrogenase. Malate dehydrogenase (MD | 96.85 | |
| PLN02383 | 344 | aspartate semialdehyde dehydrogenase | 96.79 | |
| PRK08762 | 376 | molybdopterin biosynthesis protein MoeB; Validated | 96.76 | |
| TIGR01915 | 219 | npdG NADPH-dependent F420 reductase. This model re | 96.76 | |
| TIGR02355 | 240 | moeB molybdopterin synthase sulfurylase MoeB. This | 96.75 | |
| PRK08328 | 231 | hypothetical protein; Provisional | 96.75 | |
| cd00757 | 228 | ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1 | 96.74 | |
| TIGR02354 | 200 | thiF_fam2 thiamine biosynthesis protein ThiF, fami | 96.73 | |
| PRK00048 | 257 | dihydrodipicolinate reductase; Provisional | 96.7 | |
| COG0604 | 326 | Qor NADPH:quinone reductase and related Zn-depende | 96.7 | |
| TIGR00518 | 370 | alaDH alanine dehydrogenase. The family of known L | 96.7 | |
| PRK06719 | 157 | precorrin-2 dehydrogenase; Validated | 96.7 | |
| PF00056 | 141 | Ldh_1_N: lactate/malate dehydrogenase, NAD binding | 96.7 | |
| PRK08306 | 296 | dipicolinate synthase subunit A; Reviewed | 96.69 | |
| cd01485 | 198 | E1-1_like Ubiquitin activating enzyme (E1), repeat | 96.68 | |
| cd01483 | 143 | E1_enzyme_family Superfamily of activating enzymes | 96.67 | |
| TIGR01809 | 282 | Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO | 96.67 | |
| PRK06718 | 202 | precorrin-2 dehydrogenase; Reviewed | 96.66 | |
| PRK13940 | 414 | glutamyl-tRNA reductase; Provisional | 96.66 | |
| cd01080 | 168 | NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of | 96.64 | |
| COG2085 | 211 | Predicted dinucleotide-binding enzymes [General fu | 96.63 | |
| TIGR01758 | 324 | MDH_euk_cyt malate dehydrogenase, NAD-dependent. T | 96.6 | |
| PRK05597 | 355 | molybdopterin biosynthesis protein MoeB; Validated | 96.6 | |
| PRK15116 | 268 | sulfur acceptor protein CsdL; Provisional | 96.5 | |
| cd08295 | 338 | double_bond_reductase_like Arabidopsis alkenal dou | 96.49 | |
| PRK03562 | 621 | glutathione-regulated potassium-efflux system prot | 96.48 | |
| PRK05690 | 245 | molybdopterin biosynthesis protein MoeB; Provision | 96.47 | |
| PRK12549 | 284 | shikimate 5-dehydrogenase; Reviewed | 96.45 | |
| PF01113 | 124 | DapB_N: Dihydrodipicolinate reductase, N-terminus; | 96.44 | |
| TIGR02825 | 325 | B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15 | 96.43 | |
| PRK08223 | 287 | hypothetical protein; Validated | 96.42 | |
| PF02826 | 178 | 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy | 96.4 | |
| cd01487 | 174 | E1_ThiF_like E1_ThiF_like. Member of superfamily o | 96.38 | |
| cd01075 | 200 | NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l | 96.38 | |
| PRK08057 | 248 | cobalt-precorrin-6x reductase; Reviewed | 96.38 | |
| PF00670 | 162 | AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase | 96.31 | |
| cd08259 | 332 | Zn_ADH5 Alcohol dehydrogenases of the MDR family. | 96.3 | |
| PF03807 | 96 | F420_oxidored: NADP oxidoreductase coenzyme F420-d | 96.29 | |
| cd01489 | 312 | Uba2_SUMO Ubiquitin activating enzyme (E1) subunit | 96.24 | |
| PRK00045 | 423 | hemA glutamyl-tRNA reductase; Reviewed | 96.24 | |
| PRK05600 | 370 | thiamine biosynthesis protein ThiF; Validated | 96.24 | |
| PF01210 | 157 | NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate | 96.24 | |
| TIGR01470 | 205 | cysG_Nterm siroheme synthase, N-terminal domain. T | 96.22 | |
| PRK05476 | 425 | S-adenosyl-L-homocysteine hydrolase; Provisional | 96.21 | |
| TIGR01035 | 417 | hemA glutamyl-tRNA reductase. This enzyme, togethe | 96.2 | |
| PF13241 | 103 | NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_ | 96.19 | |
| cd00755 | 231 | YgdL_like Family of activating enzymes (E1) of ubi | 96.15 | |
| PRK14027 | 283 | quinate/shikimate dehydrogenase; Provisional | 96.14 | |
| PTZ00075 | 476 | Adenosylhomocysteinase; Provisional | 96.13 | |
| TIGR00507 | 270 | aroE shikimate 5-dehydrogenase. This model finds p | 96.1 | |
| PLN02928 | 347 | oxidoreductase family protein | 96.1 | |
| PRK08655 | 437 | prephenate dehydrogenase; Provisional | 96.08 | |
| PRK11559 | 296 | garR tartronate semialdehyde reductase; Provisiona | 96.07 | |
| TIGR00978 | 341 | asd_EA aspartate-semialdehyde dehydrogenase (non-p | 96.05 | |
| PRK11863 | 313 | N-acetyl-gamma-glutamyl-phosphate reductase; Provi | 96.05 | |
| cd05213 | 311 | NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain | 96.05 | |
| PRK06019 | 372 | phosphoribosylaminoimidazole carboxylase ATPase su | 96.04 | |
| cd01484 | 234 | E1-2_like Ubiquitin activating enzyme (E1), repeat | 96.04 | |
| COG0373 | 414 | HemA Glutamyl-tRNA reductase [Coenzyme metabolism] | 96.04 | |
| PRK11199 | 374 | tyrA bifunctional chorismate mutase/prephenate deh | 96.03 | |
| COG1064 | 339 | AdhP Zn-dependent alcohol dehydrogenases [General | 96.03 | |
| cd01492 | 197 | Aos1_SUMO Ubiquitin activating enzyme (E1) subunit | 96.02 | |
| PRK06522 | 304 | 2-dehydropantoate 2-reductase; Reviewed | 96.01 | |
| PLN02494 | 477 | adenosylhomocysteinase | 95.99 | |
| PRK14618 | 328 | NAD(P)H-dependent glycerol-3-phosphate dehydrogena | 95.99 | |
| cd00401 | 413 | AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado | 95.96 | |
| PRK14619 | 308 | NAD(P)H-dependent glycerol-3-phosphate dehydrogena | 95.92 | |
| cd08253 | 325 | zeta_crystallin Zeta-crystallin with NADP-dependen | 95.92 | |
| TIGR00872 | 298 | gnd_rel 6-phosphogluconate dehydrogenase (decarbox | 95.9 | |
| PRK00094 | 325 | gpsA NAD(P)H-dependent glycerol-3-phosphate dehydr | 95.87 | |
| PLN00203 | 519 | glutamyl-tRNA reductase | 95.86 | |
| COG0002 | 349 | ArgC Acetylglutamate semialdehyde dehydrogenase [A | 95.86 | |
| PRK12749 | 288 | quinate/shikimate dehydrogenase; Reviewed | 95.84 | |
| PRK10537 | 393 | voltage-gated potassium channel; Provisional | 95.83 | |
| PRK07878 | 392 | molybdopterin biosynthesis-like protein MoeZ; Vali | 95.79 | |
| PRK06598 | 369 | aspartate-semialdehyde dehydrogenase; Reviewed | 95.77 | |
| PRK15469 | 312 | ghrA bifunctional glyoxylate/hydroxypyruvate reduc | 95.77 | |
| TIGR00936 | 406 | ahcY adenosylhomocysteinase. This enzyme hydrolyze | 95.77 | |
| cd08293 | 345 | PTGR2 Prostaglandin reductase. Prostaglandins and | 95.76 | |
| PF13380 | 116 | CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5 | 95.76 | |
| PRK07066 | 321 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 95.73 | |
| cd08266 | 342 | Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam | 95.73 | |
| cd08294 | 329 | leukotriene_B4_DH_like 13-PGR is a bifunctional en | 95.71 | |
| KOG0172 | 445 | consensus Lysine-ketoglutarate reductase/saccharop | 95.71 | |
| COG0169 | 283 | AroE Shikimate 5-dehydrogenase [Amino acid transpo | 95.7 | |
| KOG1198 | 347 | consensus Zinc-binding oxidoreductase [Energy prod | 95.69 | |
| PRK07531 | 495 | bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioe | 95.63 | |
| PRK07877 | 722 | hypothetical protein; Provisional | 95.62 | |
| PLN03154 | 348 | putative allyl alcohol dehydrogenase; Provisional | 95.62 | |
| PRK07411 | 390 | hypothetical protein; Validated | 95.62 | |
| PRK11880 | 267 | pyrroline-5-carboxylate reductase; Reviewed | 95.6 | |
| PRK09288 | 395 | purT phosphoribosylglycinamide formyltransferase 2 | 95.59 | |
| KOG0023 | 360 | consensus Alcohol dehydrogenase, class V [Secondar | 95.53 | |
| COG0240 | 329 | GpsA Glycerol-3-phosphate dehydrogenase [Energy pr | 95.51 | |
| PRK13403 | 335 | ketol-acid reductoisomerase; Provisional | 95.5 | |
| COG0136 | 334 | Asd Aspartate-semialdehyde dehydrogenase [Amino ac | 95.48 | |
| PRK07574 | 385 | formate dehydrogenase; Provisional | 95.47 | |
| TIGR01505 | 291 | tartro_sem_red 2-hydroxy-3-oxopropionate reductase | 95.44 | |
| PRK09310 | 477 | aroDE bifunctional 3-dehydroquinate dehydratase/sh | 95.44 | |
| PRK12921 | 305 | 2-dehydropantoate 2-reductase; Provisional | 95.43 | |
| PRK06249 | 313 | 2-dehydropantoate 2-reductase; Provisional | 95.41 | |
| cd05294 | 309 | LDH-like_MDH_nadp A lactate dehydrogenases-like st | 95.38 | |
| PF02571 | 249 | CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: | 95.33 | |
| PRK14192 | 283 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 95.32 | |
| cd08230 | 355 | glucose_DH Glucose dehydrogenase. Glucose dehydrog | 95.29 | |
| PRK15461 | 296 | NADH-dependent gamma-hydroxybutyrate dehydrogenase | 95.28 | |
| cd05212 | 140 | NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom | 95.26 | |
| cd01338 | 322 | MDH_choloroplast_like Chloroplast-like malate dehy | 95.25 | |
| cd05276 | 323 | p53_inducible_oxidoreductase PIG3 p53-inducible qu | 95.25 | |
| PRK12480 | 330 | D-lactate dehydrogenase; Provisional | 95.25 | |
| TIGR01381 | 664 | E1_like_apg7 E1-like protein-activating enzyme Gsa | 95.24 | |
| PRK13243 | 333 | glyoxylate reductase; Reviewed | 95.23 | |
| COG2130 | 340 | Putative NADP-dependent oxidoreductases [General f | 95.19 | |
| PF02558 | 151 | ApbA: Ketopantoate reductase PanE/ApbA; InterPro: | 95.17 | |
| PRK09260 | 288 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 95.17 | |
| cd08250 | 329 | Mgc45594_like Mgc45594 gene product and other MDR | 95.16 | |
| cd05288 | 329 | PGDH Prostaglandin dehydrogenases. Prostaglandins | 95.14 | |
| COG0111 | 324 | SerA Phosphoglycerate dehydrogenase and related de | 95.13 | |
| PRK07417 | 279 | arogenate dehydrogenase; Reviewed | 95.12 | |
| PRK14175 | 286 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 95.11 | |
| PRK06444 | 197 | prephenate dehydrogenase; Provisional | 95.1 | |
| COG0026 | 375 | PurK Phosphoribosylaminoimidazole carboxylase (NCA | 95.09 | |
| PRK07502 | 307 | cyclohexadienyl dehydrogenase; Validated | 95.08 | |
| PRK07819 | 286 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 95.07 | |
| PRK00066 | 315 | ldh L-lactate dehydrogenase; Reviewed | 95.07 | |
| TIGR01745 | 366 | asd_gamma aspartate-semialdehyde dehydrogenase, ga | 95.06 | |
| PF01262 | 168 | AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal | 95.05 | |
| PLN02948 | 577 | phosphoribosylaminoimidazole carboxylase | 95.05 | |
| PRK08229 | 341 | 2-dehydropantoate 2-reductase; Provisional | 95.05 | |
| PRK11064 | 415 | wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Pro | 95.05 | |
| PRK13982 | 475 | bifunctional SbtC-like/phosphopantothenoylcysteine | 95.04 | |
| cd08244 | 324 | MDR_enoyl_red Possible enoyl reductase. Member ide | 95.04 | |
| cd01486 | 307 | Apg7 Apg7 is an E1-like protein, that activates tw | 95.03 | |
| PRK14194 | 301 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 95.03 | |
| PRK14851 | 679 | hypothetical protein; Provisional | 95.02 | |
| PRK14852 | 989 | hypothetical protein; Provisional | 95.02 | |
| cd08292 | 324 | ETR_like_2 2-enoyl thioester reductase (ETR) like | 95.0 | |
| cd08243 | 320 | quinone_oxidoreductase_like_1 Quinone oxidoreducta | 94.99 | |
| cd05188 | 271 | MDR Medium chain reductase/dehydrogenase (MDR)/zin | 94.99 | |
| cd05291 | 306 | HicDH_like L-2-hydroxyisocapronate dehydrogenases | 94.97 | |
| PF03721 | 185 | UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogen | 94.96 | |
| PRK14188 | 296 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 94.92 | |
| PRK09599 | 301 | 6-phosphogluconate dehydrogenase-like protein; Rev | 94.92 | |
| PRK06849 | 389 | hypothetical protein; Provisional | 94.91 | |
| PLN03139 | 386 | formate dehydrogenase; Provisional | 94.9 | |
| PRK06728 | 347 | aspartate-semialdehyde dehydrogenase; Provisional | 94.82 | |
| PRK02472 | 447 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 94.81 | |
| PLN02688 | 266 | pyrroline-5-carboxylate reductase | 94.8 | |
| PRK08261 | 450 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 94.79 | |
| PRK08293 | 287 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 94.79 | |
| TIGR03026 | 411 | NDP-sugDHase nucleotide sugar dehydrogenase. All o | 94.79 | |
| PF00070 | 80 | Pyr_redox: Pyridine nucleotide-disulphide oxidored | 94.77 | |
| TIGR01142 | 380 | purT phosphoribosylglycinamide formyltransferase 2 | 94.74 | |
| PRK08410 | 311 | 2-hydroxyacid dehydrogenase; Provisional | 94.72 |
| >CHL00194 ycf39 Ycf39; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=6.4e-26 Score=210.98 Aligned_cols=198 Identities=22% Similarity=0.248 Sum_probs=155.4
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcCCc------
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG------ 173 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~g------ 173 (306)
|+|+||||||+||++++++|+++|++|++++|+.++.......+++++.+|+.|++++.++++++|+|||+++.
T Consensus 1 MkIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l~~~~v~~v~~Dl~d~~~l~~al~g~d~Vi~~~~~~~~~~~ 80 (317)
T CHL00194 1 MSLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFLKEWGAELVYGDLSLPETLPPSFKGVTAIIDASTSRPSDLY 80 (317)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhhHhhcCCEEEECCCCCHHHHHHHHCCCCEEEECCCCCCCCcc
Confidence 58999999999999999999999999999999976643333347999999999999999999999999997321
Q ss_pred -----------hhhhcccccCCCEEEEecCcccccCCCCcccccchHHHHHHHHHHHHHHhcCCCEEEEEcCcccCCC-C
Q 021854 174 -----------FISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMASGIPYTIIRTGVLQNTP-G 241 (306)
Q Consensus 174 -----------~~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~~~~~aE~~l~~sgi~~tiiRPg~l~~~~-~ 241 (306)
.+.+++++++++|||++||.++... +... ....|..+|.++++++++||++||+.+.... .
T Consensus 81 ~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~~~~~~--~~~~-----~~~~K~~~e~~l~~~~l~~tilRp~~~~~~~~~ 153 (317)
T CHL00194 81 NAKQIDWDGKLALIEAAKAAKIKRFIFFSILNAEQY--PYIP-----LMKLKSDIEQKLKKSGIPYTIFRLAGFFQGLIS 153 (317)
T ss_pred chhhhhHHHHHHHHHHHHHcCCCEEEEecccccccc--CCCh-----HHHHHHHHHHHHHHcCCCeEEEeecHHhhhhhh
Confidence 1456788899999999999754321 1111 2334667899999999999999999744221 0
Q ss_pred -------CCcceeeecCCCCccccCHHHHHHHHHHHhhCCCCCCcEEEEecCC-cCHHHHHHHHHHHhhhc
Q 021854 242 -------GKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVVNGE-EKVSDWKKCFSRLMEKT 304 (306)
Q Consensus 242 -------~~~~~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~~~g~~~~v~~g~-~s~~d~~~l~~~l~~~~ 304 (306)
......+..++....+|+++|+|++++.+++++...+++|++++++ .++.|+.+++.++.++.
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~ni~g~~~~s~~el~~~~~~~~g~~ 224 (317)
T CHL00194 154 QYAIPILEKQPIWITNESTPISYIDTQDAAKFCLKSLSLPETKNKTFPLVGPKSWNSSEIISLCEQLSGQK 224 (317)
T ss_pred hhhhhhccCCceEecCCCCccCccCHHHHHHHHHHHhcCccccCcEEEecCCCccCHHHHHHHHHHHhCCC
Confidence 1223333345556788999999999999998877778999999875 58999999999988753
|
|
| >PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B | Back alignment and domain information |
|---|
Probab=99.92 E-value=5.5e-24 Score=181.89 Aligned_cols=170 Identities=29% Similarity=0.380 Sum_probs=137.0
Q ss_pred EEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcCCc--------
Q 021854 102 VLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG-------- 173 (306)
Q Consensus 102 ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~g-------- 173 (306)
|+|+||||++|+.++++|+++|++|++++|++++... ..+++++.+|+.|.+.+.++++++|+||++.+.
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~--~~~~~~~~~d~~d~~~~~~al~~~d~vi~~~~~~~~~~~~~ 78 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED--SPGVEIIQGDLFDPDSVKAALKGADAVIHAAGPPPKDVDAA 78 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH--CTTEEEEESCTTCHHHHHHHHTTSSEEEECCHSTTTHHHHH
T ss_pred eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc--ccccccceeeehhhhhhhhhhhhcchhhhhhhhhccccccc
Confidence 7999999999999999999999999999999998766 678999999999999999999999999998331
Q ss_pred -hhhhcccccCCCEEEEecCcccccCCCCcc-cccc---hHHHHHHHHHHHHHHhcCCCEEEEEcCcccCCCCCCcceee
Q 021854 174 -FISNAGSLKGVQHVILLSQLSVYRGSGGIQ-ALMK---GNARKLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQF 248 (306)
Q Consensus 174 -~~~~~a~~~gvkr~V~iSS~~~~~~~~~~~-~~~~---~~a~~~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~~~~~~ 248 (306)
.+.+++++.+++|+|++|+.+++....... .... ..+...++.+|..+++++++|+++||+++.+..........
T Consensus 79 ~~~~~a~~~~~~~~~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~ivrp~~~~~~~~~~~~~~~ 158 (183)
T PF13460_consen 79 KNIIEAAKKAGVKRVVYLSSAGVYRDPPGLFSDEDKPIFPEYARDKREAEEALRESGLNWTIVRPGWIYGNPSRSYRLIK 158 (183)
T ss_dssp HHHHHHHHHTTSSEEEEEEETTGTTTCTSEEEGGTCGGGHHHHHHHHHHHHHHHHSTSEEEEEEESEEEBTTSSSEEEES
T ss_pred ccccccccccccccceeeeccccCCCCCcccccccccchhhhHHHHHHHHHHHHhcCCCEEEEECcEeEeCCCcceeEEe
Confidence 256778889999999999999887544321 0000 23445567789999999999999999998876644332322
Q ss_pred ecCCCCccccCHHHHHHHHHHHhhC
Q 021854 249 EEGCAANGSLSKEDAAFICVEALES 273 (306)
Q Consensus 249 ~~g~~~~~~Is~~DVA~~iv~aL~~ 273 (306)
..+....++|+++|||+++++++++
T Consensus 159 ~~~~~~~~~i~~~DvA~~~~~~l~~ 183 (183)
T PF13460_consen 159 EGGPQGVNFISREDVAKAIVEALEN 183 (183)
T ss_dssp STSTTSHCEEEHHHHHHHHHHHHH-
T ss_pred ccCCCCcCcCCHHHHHHHHHHHhCC
Confidence 3344557899999999999999874
|
... |
| >PLN00141 Tic62-NAD(P)-related group II protein; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.8e-23 Score=186.04 Aligned_cols=206 Identities=25% Similarity=0.314 Sum_probs=152.1
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcC--CCceeeeccCCC-HHHHHHHh-cCccEEEEcCC
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG--TYVESMAGDASN-KKFLKTAL-RGVRSIICPSE 172 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~--~~v~~v~~D~~d-~~~l~~~~-~~~d~vi~~~~ 172 (306)
..+++|+||||+|+||+.++++|++.|++|++++|+.++.....+ .+++++.+|+.| .+.+.+.+ .++|+||++++
T Consensus 15 ~~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d~~~~l~~~~~~~~d~vi~~~g 94 (251)
T PLN00141 15 VKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLPQDPSLQIVRADVTEGSDKLVEAIGDDSDAVICATG 94 (251)
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcccCCceEEEEeeCCCCHHHHHHHhhcCCCEEEECCC
Confidence 346899999999999999999999999999999999877543332 368899999998 46787888 68999998732
Q ss_pred c------------------hhhhcccccCCCEEEEecCcccccCCCCc---ccccch----HHHHHHHHHHHHHHhcCCC
Q 021854 173 G------------------FISNAGSLKGVQHVILLSQLSVYRGSGGI---QALMKG----NARKLAEQDESMLMASGIP 227 (306)
Q Consensus 173 g------------------~~~~~a~~~gvkr~V~iSS~~~~~~~~~~---~~~~~~----~a~~~~~~aE~~l~~sgi~ 227 (306)
. .+++++.+.+++|||++||.+++....+. ..|... .....+..+|.++++.+++
T Consensus 95 ~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~~v~g~~~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~~gi~ 174 (251)
T PLN00141 95 FRRSFDPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSILVNGAAMGQILNPAYIFLNLFGLTLVAKLQAEKYIRKSGIN 174 (251)
T ss_pred CCcCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEEccccccCCCcccccCcchhHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 1 03455667889999999999876432111 112111 1223466778889999999
Q ss_pred EEEEEcCcccCCCCCCcceeeecCC-CCccccCHHHHHHHHHHHhhCCCCCCcEEEEecCCcC-HHHHHHHHHHHhhh
Q 021854 228 YTIIRTGVLQNTPGGKQGFQFEEGC-AANGSLSKEDAAFICVEALESIPQTGLIFEVVNGEEK-VSDWKKCFSRLMEK 303 (306)
Q Consensus 228 ~tiiRPg~l~~~~~~~~~~~~~~g~-~~~~~Is~~DVA~~iv~aL~~~~~~g~~~~v~~g~~s-~~d~~~l~~~l~~~ 303 (306)
+++||||++.+....+. .....+. ...++|+++|||++++.++.++...+.++.+.+.+.. -..+.+++..+.++
T Consensus 175 ~~iirpg~~~~~~~~~~-~~~~~~~~~~~~~i~~~dvA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (251)
T PLN00141 175 YTIVRPGGLTNDPPTGN-IVMEPEDTLYEGSISRDQVAEVAVEALLCPESSYKVVEIVARADAPKRSYKDLFASIKQK 251 (251)
T ss_pred EEEEECCCccCCCCCce-EEECCCCccccCcccHHHHHHHHHHHhcChhhcCcEEEEecCCCCCchhHHHHHHHhhcC
Confidence 99999999876543332 2221222 1246899999999999999988877889999986654 47888888877653
|
|
| >TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.6e-23 Score=191.62 Aligned_cols=189 Identities=16% Similarity=0.182 Sum_probs=149.3
Q ss_pred eEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHh------cC-ccEEEEcCCc
Q 021854 101 AVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTAL------RG-VRSIICPSEG 173 (306)
Q Consensus 101 ~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~------~~-~d~vi~~~~g 173 (306)
+|+||||||++|+.++++|+++|++|++++|++++.. ..+++.+.+|+.|.+++..++ ++ +|+++++.+.
T Consensus 1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~---~~~~~~~~~d~~d~~~l~~a~~~~~~~~g~~d~v~~~~~~ 77 (285)
T TIGR03649 1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSA---GPNEKHVKFDWLDEDTWDNPFSSDDGMEPEISAVYLVAPP 77 (285)
T ss_pred CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCcccc---CCCCccccccCCCHHHHHHHHhcccCcCCceeEEEEeCCC
Confidence 5899999999999999999999999999999987643 236778899999999999999 67 9999987432
Q ss_pred ---------hhhhcccccCCCEEEEecCcccccCCCCcccccchHHHHHHHHHHHHHHhc-CCCEEEEEcCcccCCCC--
Q 021854 174 ---------FISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMAS-GIPYTIIRTGVLQNTPG-- 241 (306)
Q Consensus 174 ---------~~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~~~~~aE~~l~~s-gi~~tiiRPg~l~~~~~-- 241 (306)
.++++++++|++|||++||..+..... . +...|.++++. +++||++||+++.++..
T Consensus 78 ~~~~~~~~~~~i~aa~~~gv~~~V~~Ss~~~~~~~~----~--------~~~~~~~l~~~~gi~~tilRp~~f~~~~~~~ 145 (285)
T TIGR03649 78 IPDLAPPMIKFIDFARSKGVRRFVLLSASIIEKGGP----A--------MGQVHAHLDSLGGVEYTVLRPTWFMENFSEE 145 (285)
T ss_pred CCChhHHHHHHHHHHHHcCCCEEEEeeccccCCCCc----h--------HHHHHHHHHhccCCCEEEEeccHHhhhhccc
Confidence 156778889999999999876543211 0 22356778775 99999999998653321
Q ss_pred ------CC-cceeeecCCCCccccCHHHHHHHHHHHhhCCCCCCcEEEEecCC-cCHHHHHHHHHHHhhhc
Q 021854 242 ------GK-QGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVVNGE-EKVSDWKKCFSRLMEKT 304 (306)
Q Consensus 242 ------~~-~~~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~~~g~~~~v~~g~-~s~~d~~~l~~~l~~~~ 304 (306)
.. ..+..+.++....+|+++|+|++++.+|.++...+++|++.+++ .++.++.++++++.+++
T Consensus 146 ~~~~~~~~~~~~~~~~g~~~~~~v~~~Dva~~~~~~l~~~~~~~~~~~l~g~~~~s~~eia~~l~~~~g~~ 216 (285)
T TIGR03649 146 FHVEAIRKENKIYSATGDGKIPFVSADDIARVAYRALTDKVAPNTDYVVLGPELLTYDDVAEILSRVLGRK 216 (285)
T ss_pred ccccccccCCeEEecCCCCccCcccHHHHHHHHHHHhcCCCcCCCeEEeeCCccCCHHHHHHHHHHHhCCc
Confidence 11 11233456777889999999999999999877778899999854 58999999999988764
|
This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi. |
| >KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.4e-22 Score=185.91 Aligned_cols=203 Identities=16% Similarity=0.172 Sum_probs=146.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchh------hhhc--CCCceeeeccCCCHHHHHHHhcCccEEEE
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA------MESF--GTYVESMAGDASNKKFLKTALRGVRSIIC 169 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~------~~~~--~~~v~~v~~D~~d~~~l~~~~~~~d~vi~ 169 (306)
.+++|+||||+||||++|+++|+++||.|++.+|+++.. .++. +.+.+.+..|+.|++++.++++|||.|||
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~gcdgVfH 84 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAIDGCDGVFH 84 (327)
T ss_pred CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHHhCCCEEEE
Confidence 579999999999999999999999999999999999862 2221 24689999999999999999999999999
Q ss_pred cCCch---------------------hhhcccccC-CCEEEEecCcccccCCCCc--------------ccccch-----
Q 021854 170 PSEGF---------------------ISNAGSLKG-VQHVILLSQLSVYRGSGGI--------------QALMKG----- 208 (306)
Q Consensus 170 ~~~g~---------------------~~~~a~~~g-vkr~V~iSS~~~~~~~~~~--------------~~~~~~----- 208 (306)
++..+ +.++|.+.+ |||+|++||.++....... ..|...
T Consensus 85 ~Asp~~~~~~~~e~~li~pav~Gt~nVL~ac~~~~sVkrvV~TSS~aAv~~~~~~~~~~~vvdE~~wsd~~~~~~~~~~Y 164 (327)
T KOG1502|consen 85 TASPVDFDLEDPEKELIDPAVKGTKNVLEACKKTKSVKRVVYTSSTAAVRYNGPNIGENSVVDEESWSDLDFCRCKKLWY 164 (327)
T ss_pred eCccCCCCCCCcHHhhhhHHHHHHHHHHHHHhccCCcceEEEeccHHHhccCCcCCCCCcccccccCCcHHHHHhhHHHH
Confidence 83211 445677776 9999999999886532111 001000
Q ss_pred -HHHHHH-HHHHHHHHhcCCCEEEEEcCcccCCCCCC-------------cceeeecCCCCccccCHHHHHHHHHHHhhC
Q 021854 209 -NARKLA-EQDESMLMASGIPYTIIRTGVLQNTPGGK-------------QGFQFEEGCAANGSLSKEDAAFICVEALES 273 (306)
Q Consensus 209 -~a~~~~-~~aE~~l~~sgi~~tiiRPg~l~~~~~~~-------------~~~~~~~g~~~~~~Is~~DVA~~iv~aL~~ 273 (306)
..+... +++.++..+.+++.+.|.|+.+....-.. .+..-...+....+++++|||.+.+.++++
T Consensus 165 ~~sK~lAEkaAw~fa~e~~~~lv~inP~lV~GP~l~~~l~~s~~~~l~~i~G~~~~~~n~~~~~VdVrDVA~AHv~a~E~ 244 (327)
T KOG1502|consen 165 ALSKTLAEKAAWEFAKENGLDLVTINPGLVFGPGLQPSLNSSLNALLKLIKGLAETYPNFWLAFVDVRDVALAHVLALEK 244 (327)
T ss_pred HHHHHHHHHHHHHHHHhCCccEEEecCCceECCCcccccchhHHHHHHHHhcccccCCCCceeeEeHHHHHHHHHHHHcC
Confidence 011111 24455666789999999999854322110 010001222234589999999999999999
Q ss_pred CCCCCcEEEEecCCcCHHHHHHHHHHHh
Q 021854 274 IPQTGLIFEVVNGEEKVSDWKKCFSRLM 301 (306)
Q Consensus 274 ~~~~g~~~~v~~g~~s~~d~~~l~~~l~ 301 (306)
+.+.| .|.+.++...+.|+.+++.+.-
T Consensus 245 ~~a~G-Ryic~~~~~~~~ei~~~l~~~~ 271 (327)
T KOG1502|consen 245 PSAKG-RYICVGEVVSIKEIADILRELF 271 (327)
T ss_pred cccCc-eEEEecCcccHHHHHHHHHHhC
Confidence 99876 5888877777888888887653
|
|
| >PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.8e-22 Score=193.24 Aligned_cols=201 Identities=19% Similarity=0.255 Sum_probs=152.8
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhh--------hcCCCceeeeccCCCHHHHHHHhc----C
Q 021854 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME--------SFGTYVESMAGDASNKKFLKTALR----G 163 (306)
Q Consensus 96 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~--------~~~~~v~~v~~D~~d~~~l~~~~~----~ 163 (306)
...+++|+||||||+||++++++|+++|++|++++|+.++... ....+++++.+|++|.+++.++++ +
T Consensus 57 ~~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~~ 136 (390)
T PLN02657 57 EPKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSEGDP 136 (390)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHhCCC
Confidence 4457899999999999999999999999999999998754210 112478999999999999999998 5
Q ss_pred ccEEEEcCCc-----------------hhhhcccccCCCEEEEecCcccccCCCCcccccchHHHHHHHHHHHHHHh--c
Q 021854 164 VRSIICPSEG-----------------FISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMA--S 224 (306)
Q Consensus 164 ~d~vi~~~~g-----------------~~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~~~~~aE~~l~~--s 224 (306)
+|+|||+.+. .+.+++++.+++|||++||.+++.+ ...| ...|...|..++. +
T Consensus 137 ~D~Vi~~aa~~~~~~~~~~~vn~~~~~~ll~aa~~~gv~r~V~iSS~~v~~p---~~~~-----~~sK~~~E~~l~~~~~ 208 (390)
T PLN02657 137 VDVVVSCLASRTGGVKDSWKIDYQATKNSLDAGREVGAKHFVLLSAICVQKP---LLEF-----QRAKLKFEAELQALDS 208 (390)
T ss_pred CcEEEECCccCCCCCccchhhHHHHHHHHHHHHHHcCCCEEEEEeeccccCc---chHH-----HHHHHHHHHHHHhccC
Confidence 8999987321 1446677889999999999877543 2222 2345667777775 8
Q ss_pred CCCEEEEEcCcccCCCC-------CCcce-eeecCCCC-ccccCHHHHHHHHHHHhhCCCCCCcEEEEecC--CcCHHHH
Q 021854 225 GIPYTIIRTGVLQNTPG-------GKQGF-QFEEGCAA-NGSLSKEDAAFICVEALESIPQTGLIFEVVNG--EEKVSDW 293 (306)
Q Consensus 225 gi~~tiiRPg~l~~~~~-------~~~~~-~~~~g~~~-~~~Is~~DVA~~iv~aL~~~~~~g~~~~v~~g--~~s~~d~ 293 (306)
+++|+||||+.+..... .+..+ .++.|+.. ..+|+++|+|++++.++.++...+++|++.++ ..++.|+
T Consensus 209 gl~~tIlRp~~~~~~~~~~~~~~~~g~~~~~~GdG~~~~~~~I~v~DlA~~i~~~~~~~~~~~~~~~Iggp~~~~S~~Ei 288 (390)
T PLN02657 209 DFTYSIVRPTAFFKSLGGQVEIVKDGGPYVMFGDGKLCACKPISEADLASFIADCVLDESKINKVLPIGGPGKALTPLEQ 288 (390)
T ss_pred CCCEEEEccHHHhcccHHHHHhhccCCceEEecCCcccccCceeHHHHHHHHHHHHhCccccCCEEEcCCCCcccCHHHH
Confidence 99999999998653221 22222 23344432 35799999999999999877777899999974 4689999
Q ss_pred HHHHHHHhhhc
Q 021854 294 KKCFSRLMEKT 304 (306)
Q Consensus 294 ~~l~~~l~~~~ 304 (306)
.+++.++.+++
T Consensus 289 a~~l~~~lG~~ 299 (390)
T PLN02657 289 GEMLFRILGKE 299 (390)
T ss_pred HHHHHHHhCCC
Confidence 99999988764
|
|
| >PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=6.2e-22 Score=194.42 Aligned_cols=204 Identities=19% Similarity=0.245 Sum_probs=150.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhc---------------CCCceeeeccCCCHHHHHHHhc
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF---------------GTYVESMAGDASNKKFLKTALR 162 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~---------------~~~v~~v~~D~~d~~~l~~~~~ 162 (306)
.+++|+||||+|+||++++++|+++|++|++++|+.+++.... ..+++++.+|+.|.+++++++.
T Consensus 79 ~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~aLg 158 (576)
T PLN03209 79 DEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGPALG 158 (576)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHHHhc
Confidence 4689999999999999999999999999999999987743211 1247899999999999999999
Q ss_pred CccEEEEcCCch--------------------hhhcccccCCCEEEEecCcccccCCCCccccc-chHHHHHHHHHHHHH
Q 021854 163 GVRSIICPSEGF--------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALM-KGNARKLAEQDESML 221 (306)
Q Consensus 163 ~~d~vi~~~~g~--------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~-~~~a~~~~~~aE~~l 221 (306)
++|+|||+++.. +++++...+++|||++||.++.........+. ...+..+++.+|.+|
T Consensus 159 giDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~agVgRIV~VSSiga~~~g~p~~~~~sk~~~~~~KraaE~~L 238 (576)
T PLN03209 159 NASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAKVNHFILVTSLGTNKVGFPAAILNLFWGVLCWKRKAEEAL 238 (576)
T ss_pred CCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHhCCCEEEEEccchhcccCccccchhhHHHHHHHHHHHHHHH
Confidence 999999984311 34556678999999999987642111111111 123455678899999
Q ss_pred HhcCCCEEEEEcCcccCCCC---CCcceeeecCC-CCccccCHHHHHHHHHHHhhCCC-CCCcEEEEecCCc-CHHHHHH
Q 021854 222 MASGIPYTIIRTGVLQNTPG---GKQGFQFEEGC-AANGSLSKEDAAFICVEALESIP-QTGLIFEVVNGEE-KVSDWKK 295 (306)
Q Consensus 222 ~~sgi~~tiiRPg~l~~~~~---~~~~~~~~~g~-~~~~~Is~~DVA~~iv~aL~~~~-~~g~~~~v~~g~~-s~~d~~~ 295 (306)
+.+||+|++||||++..... ....+.....+ .....++++|||+++++++.++. ..+++|.+.+++. ...++.+
T Consensus 239 ~~sGIrvTIVRPG~L~tp~d~~~~t~~v~~~~~d~~~gr~isreDVA~vVvfLasd~~as~~kvvevi~~~~~p~~~~~~ 318 (576)
T PLN03209 239 IASGLPYTIVRPGGMERPTDAYKETHNLTLSEEDTLFGGQVSNLQVAELMACMAKNRRLSYCKVVEVIAETTAPLTPMEE 318 (576)
T ss_pred HHcCCCEEEEECCeecCCccccccccceeeccccccCCCccCHHHHHHHHHHHHcCchhccceEEEEEeCCCCCCCCHHH
Confidence 99999999999999753211 11222222222 22457999999999999998765 6789999999763 4567777
Q ss_pred HHHHHh
Q 021854 296 CFSRLM 301 (306)
Q Consensus 296 l~~~l~ 301 (306)
+|..+-
T Consensus 319 ~~~~ip 324 (576)
T PLN03209 319 LLAKIP 324 (576)
T ss_pred HHHhcc
Confidence 777654
|
|
| >PLN02427 UDP-apiose/xylose synthase | Back alignment and domain information |
|---|
Probab=99.89 E-value=9.5e-22 Score=187.65 Aligned_cols=204 Identities=15% Similarity=0.150 Sum_probs=147.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHC-CCeEEEEecCcchhhhhc-------CCCceeeeccCCCHHHHHHHhcCccEEEE
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVK-RTRIKALVKDKRNAMESF-------GTYVESMAGDASNKKFLKTALRGVRSIIC 169 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~-g~~V~~l~R~~~~~~~~~-------~~~v~~v~~D~~d~~~l~~~~~~~d~vi~ 169 (306)
.+|+|||||||||||++++++|+++ |++|+++.|+.++..... ..+++++.+|+.|.+.+.++++++|+|||
T Consensus 13 ~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~d~ViH 92 (386)
T PLN02427 13 KPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKHDSRLEGLIKMADLTIN 92 (386)
T ss_pred cCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccccccCCCCeEEEEcCCCChHHHHHHhhcCCEEEE
Confidence 4578999999999999999999998 599999998775533221 23689999999999999999999999999
Q ss_pred cCC---c--h-----------------hhhcccccCCCEEEEecCcccccCCCC--------ccc---------------
Q 021854 170 PSE---G--F-----------------ISNAGSLKGVQHVILLSQLSVYRGSGG--------IQA--------------- 204 (306)
Q Consensus 170 ~~~---g--~-----------------~~~~a~~~gvkr~V~iSS~~~~~~~~~--------~~~--------------- 204 (306)
+++ . . +.+++++.+ ++||++||..+|....+ ...
T Consensus 93 lAa~~~~~~~~~~~~~~~~~n~~gt~~ll~aa~~~~-~r~v~~SS~~vYg~~~~~~~~e~~p~~~~~~~~~~~e~~~~~~ 171 (386)
T PLN02427 93 LAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCEVYGKTIGSFLPKDHPLRQDPAFYVLKEDESPCI 171 (386)
T ss_pred cccccChhhhhhChHHHHHHHHHHHHHHHHHHHhcC-CEEEEEeeeeeeCCCcCCCCCcccccccccccccccccccccc
Confidence 843 1 0 234455566 89999999888753210 000
Q ss_pred c-----cchHHHHHHHHHHHHHHh----cCCCEEEEEcCcccCCCC-------------------------CCcce-eee
Q 021854 205 L-----MKGNARKLAEQDESMLMA----SGIPYTIIRTGVLQNTPG-------------------------GKQGF-QFE 249 (306)
Q Consensus 205 ~-----~~~~a~~~~~~aE~~l~~----sgi~~tiiRPg~l~~~~~-------------------------~~~~~-~~~ 249 (306)
+ ....+...|..+|.++.. .+++++++||+.+..... .+..+ .++
T Consensus 172 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~g 251 (386)
T PLN02427 172 FGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRREPLKLVD 251 (386)
T ss_pred cCCCCccccchHHHHHHHHHHHHHHHhhcCCceEEecccceeCCCCCccccccccccccchHHHHHHHHHhcCCCeEEEC
Confidence 0 001233456667777653 689999999998543210 11112 122
Q ss_pred cCCCCccccCHHHHHHHHHHHhhCCC-CCCcEEEEecC--CcCHHHHHHHHHHHhh
Q 021854 250 EGCAANGSLSKEDAAFICVEALESIP-QTGLIFEVVNG--EEKVSDWKKCFSRLME 302 (306)
Q Consensus 250 ~g~~~~~~Is~~DVA~~iv~aL~~~~-~~g~~~~v~~g--~~s~~d~~~l~~~l~~ 302 (306)
.+.....+|+++|+|++++.+++++. ..+++||++++ +.++.|+.+++.++.+
T Consensus 252 ~g~~~r~~i~V~Dva~ai~~al~~~~~~~g~~yni~~~~~~~s~~el~~~i~~~~g 307 (386)
T PLN02427 252 GGQSQRTFVYIKDAIEAVLLMIENPARANGHIFNVGNPNNEVTVRQLAEMMTEVYA 307 (386)
T ss_pred CCCceECcEeHHHHHHHHHHHHhCcccccCceEEeCCCCCCccHHHHHHHHHHHhc
Confidence 34445689999999999999998764 45789999985 4689999999988765
|
|
| >PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.6e-22 Score=178.50 Aligned_cols=201 Identities=22% Similarity=0.267 Sum_probs=147.0
Q ss_pred EEEEcCCChHHHHHHHHHHHCCCeEEEEecCcch--hhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcCC---c---
Q 021854 102 VLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN--AMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE---G--- 173 (306)
Q Consensus 102 ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~--~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~---g--- 173 (306)
|+|+||||.+|+.+++.|++.+++|++++|+..+ .......+++++.+|+.|.+++.++|+|+|+||++.+ .
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~~~~~l~~~g~~vv~~d~~~~~~l~~al~g~d~v~~~~~~~~~~~~ 80 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSSDRAQQLQALGAEVVEADYDDPESLVAALKGVDAVFSVTPPSHPSEL 80 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHHHHHHHHHHTTTEEEES-TT-HHHHHHHHTTCSEEEEESSCSCCCHH
T ss_pred CEEECCccHHHHHHHHHHHhCCCCcEEEEeccchhhhhhhhcccceEeecccCCHHHHHHHHcCCceEEeecCcchhhhh
Confidence 7999999999999999999999999999999854 2222335789999999999999999999999998843 1
Q ss_pred ----hhhhcccccCCCEEEEecCcccccCCCCcccccchHHHHHHHHHHHHHHhcCCCEEEEEcCcccCCC---------
Q 021854 174 ----FISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMASGIPYTIIRTGVLQNTP--------- 240 (306)
Q Consensus 174 ----~~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~~~~~aE~~l~~sgi~~tiiRPg~l~~~~--------- 240 (306)
.++++++++||+|||+.|....+.......+ .......|...|+++++.+++||+||||++.+..
T Consensus 81 ~~~~~li~Aa~~agVk~~v~ss~~~~~~~~~~~~p--~~~~~~~k~~ie~~l~~~~i~~t~i~~g~f~e~~~~~~~~~~~ 158 (233)
T PF05368_consen 81 EQQKNLIDAAKAAGVKHFVPSSFGADYDESSGSEP--EIPHFDQKAEIEEYLRESGIPYTIIRPGFFMENLLPPFAPVVD 158 (233)
T ss_dssp HHHHHHHHHHHHHT-SEEEESEESSGTTTTTTSTT--HHHHHHHHHHHHHHHHHCTSEBEEEEE-EEHHHHHTTTHHTTC
T ss_pred hhhhhHHHhhhccccceEEEEEecccccccccccc--cchhhhhhhhhhhhhhhccccceeccccchhhhhhhhhccccc
Confidence 1778899999999997444444322211111 1112334667899999999999999999865221
Q ss_pred -CCCc-ceee-ecCCCCccc-cCHHHHHHHHHHHhhCCCCC--CcEEEEecCCcCHHHHHHHHHHHhhhc
Q 021854 241 -GGKQ-GFQF-EEGCAANGS-LSKEDAAFICVEALESIPQT--GLIFEVVNGEEKVSDWKKCFSRLMEKT 304 (306)
Q Consensus 241 -~~~~-~~~~-~~g~~~~~~-Is~~DVA~~iv~aL~~~~~~--g~~~~v~~g~~s~~d~~~l~~~l~~~~ 304 (306)
.... ...+ ..++....+ ++.+|+|++++.+|.+|... ++.+.+++...+..|+++++++..++.
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~Dvg~~va~il~~p~~~~~~~~~~~~~~~~t~~eia~~~s~~~G~~ 228 (233)
T PF05368_consen 159 IKKSKDVVTLPGPGNQKAVPVTDTRDVGRAVAAILLDPEKHNNGKTIFLAGETLTYNEIAAILSKVLGKK 228 (233)
T ss_dssp SCCTSSEEEEETTSTSEEEEEEHHHHHHHHHHHHHHSGGGTTEEEEEEEGGGEEEHHHHHHHHHHHHTSE
T ss_pred ccccceEEEEccCCCccccccccHHHHHHHHHHHHcChHHhcCCEEEEeCCCCCCHHHHHHHHHHHHCCc
Confidence 1111 1223 334434455 59999999999999998654 688888776679999999999998875
|
NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B .... |
| >PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.8e-21 Score=183.38 Aligned_cols=207 Identities=10% Similarity=-0.004 Sum_probs=147.9
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhh----hhc-------CCCceeeeccCCCHHHHHHHhcCc
Q 021854 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM----ESF-------GTYVESMAGDASNKKFLKTALRGV 164 (306)
Q Consensus 96 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~----~~~-------~~~v~~v~~D~~d~~~l~~~~~~~ 164 (306)
-..+++|+||||||+||++++++|+++|++|++++|...... ... ...+.++.+|+.|.+.+..+++++
T Consensus 12 ~~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~~~ 91 (348)
T PRK15181 12 VLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACKNV 91 (348)
T ss_pred cccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhhCC
Confidence 345689999999999999999999999999999998653211 110 125788999999999999999999
Q ss_pred cEEEEcCCc----------------------hhhhcccccCCCEEEEecCcccccCCCCcc------cccchHHHHHHHH
Q 021854 165 RSIICPSEG----------------------FISNAGSLKGVQHVILLSQLSVYRGSGGIQ------ALMKGNARKLAEQ 216 (306)
Q Consensus 165 d~vi~~~~g----------------------~~~~~a~~~gvkr~V~iSS~~~~~~~~~~~------~~~~~~a~~~~~~ 216 (306)
|+|||+++. .+.+++++.++++|||+||..+|....... ....+.+...|..
T Consensus 92 d~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~p~~~Y~~sK~~ 171 (348)
T PRK15181 92 DYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYV 171 (348)
T ss_pred CEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeechHhhCCCCCCCCCCCCCCCCCChhhHHHHH
Confidence 999998431 145667788999999999998876321110 0011122333445
Q ss_pred HHHHHH----hcCCCEEEEEcCcccCC-C--C---------------CCccee-eecCCCCccccCHHHHHHHHHHHhhC
Q 021854 217 DESMLM----ASGIPYTIIRTGVLQNT-P--G---------------GKQGFQ-FEEGCAANGSLSKEDAAFICVEALES 273 (306)
Q Consensus 217 aE~~l~----~sgi~~tiiRPg~l~~~-~--~---------------~~~~~~-~~~g~~~~~~Is~~DVA~~iv~aL~~ 273 (306)
+|.+++ +.+++++++||+.+... . . .+..+. ++.|.....+++++|+|++++.++..
T Consensus 172 ~e~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~~~i~~~g~g~~~rd~i~v~D~a~a~~~~~~~ 251 (348)
T PRK15181 172 NELYADVFARSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLLSATT 251 (348)
T ss_pred HHHHHHHHHHHhCCCEEEEEecceeCcCCCCCCccccCHHHHHHHHHcCCCcEEeCCCCceEeeEEHHHHHHHHHHHHhc
Confidence 555443 46899999999985432 1 0 112222 34566668899999999999887764
Q ss_pred CC--CCCcEEEEecCC-cCHHHHHHHHHHHhh
Q 021854 274 IP--QTGLIFEVVNGE-EKVSDWKKCFSRLME 302 (306)
Q Consensus 274 ~~--~~g~~~~v~~g~-~s~~d~~~l~~~l~~ 302 (306)
+. ..+.+||+++++ .+++|+.+.+.++.+
T Consensus 252 ~~~~~~~~~yni~~g~~~s~~e~~~~i~~~~~ 283 (348)
T PRK15181 252 NDLASKNKVYNVAVGDRTSLNELYYLIRDGLN 283 (348)
T ss_pred ccccCCCCEEEecCCCcEeHHHHHHHHHHHhC
Confidence 32 356899999876 489999999987765
|
|
| >PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.4e-21 Score=177.49 Aligned_cols=201 Identities=19% Similarity=0.237 Sum_probs=143.2
Q ss_pred EEEcCCChHHHHHHHHHHHCC--CeEEEEecCcchhh--hhcCCCc-eeeeccCCCHHHHHHHhcCccEEEEcCC-----
Q 021854 103 LVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRNAM--ESFGTYV-ESMAGDASNKKFLKTALRGVRSIICPSE----- 172 (306)
Q Consensus 103 lVtGatG~iG~~l~~~L~~~g--~~V~~l~R~~~~~~--~~~~~~v-~~v~~D~~d~~~l~~~~~~~d~vi~~~~----- 172 (306)
|||||+||||++|+++|+++| ++|++++|...... .....+. +++.+|++|++++.++++++|+|||+++
T Consensus 1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~a~~g~d~V~H~Aa~~~~~ 80 (280)
T PF01073_consen 1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFLKDLQKSGVKEYIQGDITDPESLEEALEGVDVVFHTAAPVPPW 80 (280)
T ss_pred CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccccchhhhcccceeEEEeccccHHHHHHHhcCCceEEEeCcccccc
Confidence 699999999999999999999 79999988775422 1222233 3899999999999999999999999832
Q ss_pred c----------------hhhhcccccCCCEEEEecCcccccC---CCCc------ccc---cchHHHHHHHHHHHHHHh-
Q 021854 173 G----------------FISNAGSLKGVQHVILLSQLSVYRG---SGGI------QAL---MKGNARKLAEQDESMLMA- 223 (306)
Q Consensus 173 g----------------~~~~~a~~~gvkr~V~iSS~~~~~~---~~~~------~~~---~~~~a~~~~~~aE~~l~~- 223 (306)
+ .++++|++.+|++|||+||.+++.+ ..+. ..| ....+...|..+|+++.+
T Consensus 81 ~~~~~~~~~~vNV~GT~nvl~aa~~~~VkrlVytSS~~vv~~~~~~~~~~~~dE~~~~~~~~~~~Y~~SK~~AE~~V~~a 160 (280)
T PF01073_consen 81 GDYPPEEYYKVNVDGTRNVLEAARKAGVKRLVYTSSISVVFDNYKGDPIINGDEDTPYPSSPLDPYAESKALAEKAVLEA 160 (280)
T ss_pred CcccHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcCcceeEeccCCCCcccCCcCCcccccccCchHHHHHHHHHHHHhh
Confidence 1 1567888999999999999988654 1111 111 111244456778887654
Q ss_pred cC--------CCEEEEEcCcccC-CCC-----------CC-cceeeecCCCCccccCHHHHHHHHHHHhh---CC----C
Q 021854 224 SG--------IPYTIIRTGVLQN-TPG-----------GK-QGFQFEEGCAANGSLSKEDAAFICVEALE---SI----P 275 (306)
Q Consensus 224 sg--------i~~tiiRPg~l~~-~~~-----------~~-~~~~~~~g~~~~~~Is~~DVA~~iv~aL~---~~----~ 275 (306)
.+ +.+++|||..+.. .+. .+ ..+.++.+....++++++|||++++.+.+ ++ .
T Consensus 161 ~~~~~~~g~~l~t~~lRP~~IyGp~d~~~~~~~~~~~~~g~~~~~~g~~~~~~~~vyV~NvA~ahvlA~~~L~~~~~~~~ 240 (280)
T PF01073_consen 161 NGSELKNGGRLRTCALRPAGIYGPGDQRLVPRLVKMVRSGLFLFQIGDGNNLFDFVYVENVAHAHVLAAQALLEPGKPER 240 (280)
T ss_pred cccccccccceeEEEEeccEEeCcccccccchhhHHHHhcccceeecCCCceECcEeHHHHHHHHHHHHHHhcccccccc
Confidence 22 7899999998553 221 11 22334455556889999999999988754 22 3
Q ss_pred CCCcEEEEecCCc-C-HHHHHHHHHHHhhh
Q 021854 276 QTGLIFEVVNGEE-K-VSDWKKCFSRLMEK 303 (306)
Q Consensus 276 ~~g~~~~v~~g~~-s-~~d~~~l~~~l~~~ 303 (306)
..|+.|.+++++. . +.|+...+.+..+.
T Consensus 241 ~~G~~y~itd~~p~~~~~~f~~~~~~~~G~ 270 (280)
T PF01073_consen 241 VAGQAYFITDGEPVPSFWDFMRPLWEALGY 270 (280)
T ss_pred CCCcEEEEECCCccCcHHHHHHHHHHHCCC
Confidence 5789999999764 4 67777666555443
|
3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process |
| >PLN02214 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.88 E-value=6.5e-21 Score=179.29 Aligned_cols=205 Identities=15% Similarity=0.164 Sum_probs=145.5
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhh-----hhc--CCCceeeeccCCCHHHHHHHhcCccEEEE
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM-----ESF--GTYVESMAGDASNKKFLKTALRGVRSIIC 169 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~-----~~~--~~~v~~v~~D~~d~~~l~~~~~~~d~vi~ 169 (306)
.++++|+||||+|+||++++++|+++|++|++++|+.++.. ... ..+++++.+|++|.+.+.++++++|+|||
T Consensus 8 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih 87 (342)
T PLN02214 8 PAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDYEALKAAIDGCDGVFH 87 (342)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCChHHHHHHHhcCCEEEE
Confidence 45789999999999999999999999999999999875421 111 13578899999999999999999999999
Q ss_pred cCCch-----------------hhhcccccCCCEEEEecCcc-cccCCCC-----cccc----------cchHHHHHHHH
Q 021854 170 PSEGF-----------------ISNAGSLKGVQHVILLSQLS-VYRGSGG-----IQAL----------MKGNARKLAEQ 216 (306)
Q Consensus 170 ~~~g~-----------------~~~~a~~~gvkr~V~iSS~~-~~~~~~~-----~~~~----------~~~~a~~~~~~ 216 (306)
+++.. +.+++.+.++++||++||.. +|..... .... ..+.+...|..
T Consensus 88 ~A~~~~~~~~~~~~~nv~gt~~ll~aa~~~~v~r~V~~SS~~avyg~~~~~~~~~~~E~~~~~~~~~~~p~~~Y~~sK~~ 167 (342)
T PLN02214 88 TASPVTDDPEQMVEPAVNGAKFVINAAAEAKVKRVVITSSIGAVYMDPNRDPEAVVDESCWSDLDFCKNTKNWYCYGKMV 167 (342)
T ss_pred ecCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeccceeeeccCCCCCCcccCcccCCChhhccccccHHHHHHHH
Confidence 84311 45667788999999999974 4431110 0000 01123334555
Q ss_pred HHHHHH----hcCCCEEEEEcCcccCCCCCCc-------------ceeeecCCCCccccCHHHHHHHHHHHhhCCCCCCc
Q 021854 217 DESMLM----ASGIPYTIIRTGVLQNTPGGKQ-------------GFQFEEGCAANGSLSKEDAAFICVEALESIPQTGL 279 (306)
Q Consensus 217 aE~~l~----~sgi~~tiiRPg~l~~~~~~~~-------------~~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~~~g~ 279 (306)
+|.++. +.+++++++||+.+........ +.....++....+|+++|||++++.+++.+... .
T Consensus 168 aE~~~~~~~~~~g~~~v~lRp~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~V~Dva~a~~~al~~~~~~-g 246 (342)
T PLN02214 168 AEQAAWETAKEKGVDLVVLNPVLVLGPPLQPTINASLYHVLKYLTGSAKTYANLTQAYVDVRDVALAHVLVYEAPSAS-G 246 (342)
T ss_pred HHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCcccCCCCCcCeeEHHHHHHHHHHHHhCcccC-C
Confidence 566553 4699999999998653221100 000112333467899999999999999876543 4
Q ss_pred EEEEecCCcCHHHHHHHHHHHhh
Q 021854 280 IFEVVNGEEKVSDWKKCFSRLME 302 (306)
Q Consensus 280 ~~~v~~g~~s~~d~~~l~~~l~~ 302 (306)
.|++++++.++.++.+++.++..
T Consensus 247 ~yn~~~~~~~~~el~~~i~~~~~ 269 (342)
T PLN02214 247 RYLLAESARHRGEVVEILAKLFP 269 (342)
T ss_pred cEEEecCCCCHHHHHHHHHHHCC
Confidence 89998877788999998888763
|
|
| >PLN00016 RNA-binding protein; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.5e-21 Score=185.88 Aligned_cols=206 Identities=15% Similarity=0.184 Sum_probs=151.1
Q ss_pred ccCCCeEEEE----cCCChHHHHHHHHHHHCCCeEEEEecCcchhhh-----------hcCCCceeeeccCCCHHHHHHH
Q 021854 96 EEARDAVLVT----DGDSDIGQMVILSLIVKRTRIKALVKDKRNAME-----------SFGTYVESMAGDASNKKFLKTA 160 (306)
Q Consensus 96 ~~~~~~ilVt----GatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~-----------~~~~~v~~v~~D~~d~~~l~~~ 160 (306)
..++++|||| ||||+||++++++|+++||+|++++|+...... ....+++++.+|+.| +..+
T Consensus 49 ~~~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d---~~~~ 125 (378)
T PLN00016 49 AVEKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVWGDPAD---VKSK 125 (378)
T ss_pred ccccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhhhcCceEEEecHHH---HHhh
Confidence 3356899999 999999999999999999999999998764211 112358899999877 3344
Q ss_pred h--cCccEEEEcCCc------hhhhcccccCCCEEEEecCcccccCCCCcccc--cchHHHHHHHHHHHHHHhcCCCEEE
Q 021854 161 L--RGVRSIICPSEG------FISNAGSLKGVQHVILLSQLSVYRGSGGIQAL--MKGNARKLAEQDESMLMASGIPYTI 230 (306)
Q Consensus 161 ~--~~~d~vi~~~~g------~~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~--~~~~a~~~~~~aE~~l~~sgi~~ti 230 (306)
+ .++|+|||+++. .+++++++.|++|||++||.++|......... ........|..+|.++++.+++|++
T Consensus 126 ~~~~~~d~Vi~~~~~~~~~~~~ll~aa~~~gvkr~V~~SS~~vyg~~~~~p~~E~~~~~p~~sK~~~E~~l~~~~l~~~i 205 (378)
T PLN00016 126 VAGAGFDVVYDNNGKDLDEVEPVADWAKSPGLKQFLFCSSAGVYKKSDEPPHVEGDAVKPKAGHLEVEAYLQKLGVNWTS 205 (378)
T ss_pred hccCCccEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEEccHhhcCCCCCCCCCCCCcCCCcchHHHHHHHHHHcCCCeEE
Confidence 4 578999998432 26778888999999999999887643211100 0000011366788999999999999
Q ss_pred EEcCcccCCCC-------------CCcceee-ecCCCCccccCHHHHHHHHHHHhhCCCCCCcEEEEecCC-cCHHHHHH
Q 021854 231 IRTGVLQNTPG-------------GKQGFQF-EEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVVNGE-EKVSDWKK 295 (306)
Q Consensus 231 iRPg~l~~~~~-------------~~~~~~~-~~g~~~~~~Is~~DVA~~iv~aL~~~~~~g~~~~v~~g~-~s~~d~~~ 295 (306)
+||+++..... .+..+.+ +.+.....+++++|+|++++.++.++...+++|++++++ .++.|+.+
T Consensus 206 lRp~~vyG~~~~~~~~~~~~~~~~~~~~i~~~g~g~~~~~~i~v~Dva~ai~~~l~~~~~~~~~yni~~~~~~s~~el~~ 285 (378)
T PLN00016 206 FRPQYIYGPGNNKDCEEWFFDRLVRGRPVPIPGSGIQLTQLGHVKDLASMFALVVGNPKAAGQIFNIVSDRAVTFDGMAK 285 (378)
T ss_pred EeceeEECCCCCCchHHHHHHHHHcCCceeecCCCCeeeceecHHHHHHHHHHHhcCccccCCEEEecCCCccCHHHHHH
Confidence 99998653211 1122222 234555789999999999999998876667899999865 68999999
Q ss_pred HHHHHhhhc
Q 021854 296 CFSRLMEKT 304 (306)
Q Consensus 296 l~~~l~~~~ 304 (306)
++.+..+.+
T Consensus 286 ~i~~~~g~~ 294 (378)
T PLN00016 286 ACAKAAGFP 294 (378)
T ss_pred HHHHHhCCC
Confidence 998887654
|
|
| >PLN02986 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.4e-20 Score=175.11 Aligned_cols=204 Identities=17% Similarity=0.178 Sum_probs=140.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhh---hhc-----CCCceeeeccCCCHHHHHHHhcCccEEEE
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM---ESF-----GTYVESMAGDASNKKFLKTALRGVRSIIC 169 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~---~~~-----~~~v~~v~~D~~d~~~l~~~~~~~d~vi~ 169 (306)
.+++|+||||+|+||++++++|+++|++|++++|+.++.. ... ..+++++.+|++|.+.+.++++++|+|||
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih 83 (322)
T PLN02986 4 GGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIEGCDAVFH 83 (322)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHhCCCEEEE
Confidence 3689999999999999999999999999999999876421 111 23688999999999999999999999999
Q ss_pred cCCch---------------------hhhccccc-CCCEEEEecCccccc-CCCC------c------ccc----cchHH
Q 021854 170 PSEGF---------------------ISNAGSLK-GVQHVILLSQLSVYR-GSGG------I------QAL----MKGNA 210 (306)
Q Consensus 170 ~~~g~---------------------~~~~a~~~-gvkr~V~iSS~~~~~-~~~~------~------~~~----~~~~a 210 (306)
+++.. +.+++.+. +++|||++||.+++. .... . .+. ....+
T Consensus 84 ~A~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~rvV~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~~~Y 163 (322)
T PLN02986 84 TASPVFFTVKDPQTELIDPALKGTINVLNTCKETPSVKRVILTSSTAAVLFRQPPIEANDVVDETFFSDPSLCRETKNWY 163 (322)
T ss_pred eCCCcCCCCCCchhhhhHHHHHHHHHHHHHHHhcCCccEEEEecchhheecCCccCCCCCCcCcccCCChHHhhccccch
Confidence 84311 22345554 799999999987542 1100 0 000 00112
Q ss_pred HHHHHHHHH----HHHhcCCCEEEEEcCcccCCCCC-Ccce----e--e--e---cCCCCccccCHHHHHHHHHHHhhCC
Q 021854 211 RKLAEQDES----MLMASGIPYTIIRTGVLQNTPGG-KQGF----Q--F--E---EGCAANGSLSKEDAAFICVEALESI 274 (306)
Q Consensus 211 ~~~~~~aE~----~l~~sgi~~tiiRPg~l~~~~~~-~~~~----~--~--~---~g~~~~~~Is~~DVA~~iv~aL~~~ 274 (306)
...|..+|. +.++.+++++++||+.+...... .... . + + .+.....+++++|+|++++.+++.+
T Consensus 164 ~~sK~~aE~~~~~~~~~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~Dva~a~~~al~~~ 243 (322)
T PLN02986 164 PLSKILAENAAWEFAKDNGIDMVVLNPGFICGPLLQPTLNFSVELIVDFINGKNLFNNRFYRFVDVRDVALAHIKALETP 243 (322)
T ss_pred HHHHHHHHHHHHHHHHHhCCeEEEEcccceeCCCCCCCCCccHHHHHHHHcCCCCCCCcCcceeEHHHHHHHHHHHhcCc
Confidence 223434443 44457999999999985532110 0000 0 0 0 1233357899999999999999887
Q ss_pred CCCCcEEEEecCCcCHHHHHHHHHHHhh
Q 021854 275 PQTGLIFEVVNGEEKVSDWKKCFSRLME 302 (306)
Q Consensus 275 ~~~g~~~~v~~g~~s~~d~~~l~~~l~~ 302 (306)
...+ .|++.+++.++.++.+++.++..
T Consensus 244 ~~~~-~yni~~~~~s~~e~~~~i~~~~~ 270 (322)
T PLN02986 244 SANG-RYIIDGPIMSVNDIIDILRELFP 270 (322)
T ss_pred ccCC-cEEEecCCCCHHHHHHHHHHHCC
Confidence 6544 89997666789999999887653
|
|
| >PLN02695 GDP-D-mannose-3',5'-epimerase | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.9e-20 Score=177.97 Aligned_cols=203 Identities=13% Similarity=0.040 Sum_probs=145.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcCCc----
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG---- 173 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~g---- 173 (306)
.+|+|+||||||+||++++++|+++|++|++++|............++++.+|+.|.+.+..+++++|+|||+++.
T Consensus 20 ~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih~Aa~~~~~ 99 (370)
T PLN02695 20 EKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEHMSEDMFCHEFHLVDLRVMENCLKVTKGVDHVFNLAADMGGM 99 (370)
T ss_pred CCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEeccccccccccccceEEECCCCCHHHHHHHHhCCCEEEEcccccCCc
Confidence 4689999999999999999999999999999998653211111113578889999999999999999999998421
Q ss_pred -------------------hhhhcccccCCCEEEEecCcccccCCCC------cc-----cc-cchHHHHHHHHHHHHHH
Q 021854 174 -------------------FISNAGSLKGVQHVILLSQLSVYRGSGG------IQ-----AL-MKGNARKLAEQDESMLM 222 (306)
Q Consensus 174 -------------------~~~~~a~~~gvkr~V~iSS~~~~~~~~~------~~-----~~-~~~~a~~~~~~aE~~l~ 222 (306)
.+.+++++.++++||++||..+|..... .. +. ..+.+...|..+|.+++
T Consensus 100 ~~~~~~~~~~~~~N~~~t~nll~aa~~~~vk~~V~~SS~~vYg~~~~~~~~~~~~E~~~~p~~p~s~Yg~sK~~~E~~~~ 179 (370)
T PLN02695 100 GFIQSNHSVIMYNNTMISFNMLEAARINGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLATEELCK 179 (370)
T ss_pred cccccCchhhHHHHHHHHHHHHHHHHHhCCCEEEEeCchhhcCCccccCcCCCcCcccCCCCCCCCHHHHHHHHHHHHHH
Confidence 0345567789999999999888753211 00 11 11233445556666543
Q ss_pred ----hcCCCEEEEEcCcccCCCCC-------------------Ccce-eeecCCCCccccCHHHHHHHHHHHhhCCCCCC
Q 021854 223 ----ASGIPYTIIRTGVLQNTPGG-------------------KQGF-QFEEGCAANGSLSKEDAAFICVEALESIPQTG 278 (306)
Q Consensus 223 ----~sgi~~tiiRPg~l~~~~~~-------------------~~~~-~~~~g~~~~~~Is~~DVA~~iv~aL~~~~~~g 278 (306)
..+++++++||+.+...... ...+ .++.++...++++++|+++++..++..+ .+
T Consensus 180 ~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~g~~~r~~i~v~D~a~ai~~~~~~~--~~ 257 (370)
T PLN02695 180 HYTKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDEFEMWGDGKQTRSFTFIDECVEGVLRLTKSD--FR 257 (370)
T ss_pred HHHHHhCCCEEEEEECCccCCCCCccccccccHHHHHHHHHcCCCCeEEeCCCCeEEeEEeHHHHHHHHHHHHhcc--CC
Confidence 46999999999985532110 1122 2245566688999999999999987754 25
Q ss_pred cEEEEecCC-cCHHHHHHHHHHHhh
Q 021854 279 LIFEVVNGE-EKVSDWKKCFSRLME 302 (306)
Q Consensus 279 ~~~~v~~g~-~s~~d~~~l~~~l~~ 302 (306)
.+||+++++ .++.++.+.+.+..+
T Consensus 258 ~~~nv~~~~~~s~~el~~~i~~~~g 282 (370)
T PLN02695 258 EPVNIGSDEMVSMNEMAEIALSFEN 282 (370)
T ss_pred CceEecCCCceeHHHHHHHHHHHhC
Confidence 789999865 488999998877654
|
|
| >COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.4e-20 Score=169.20 Aligned_cols=200 Identities=19% Similarity=0.214 Sum_probs=147.6
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCC-ceeeeccCCCHHHHHHHhcC--ccEEEEcCCc---
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTY-VESMAGDASNKKFLKTALRG--VRSIICPSEG--- 173 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~-v~~v~~D~~d~~~l~~~~~~--~d~vi~~~~g--- 173 (306)
|+||||||+|+||++.+.+|++.|++|+++..-.....+..... ++++++|+.|.+.+.+.|+. .|+|||.++-
T Consensus 1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~~~~f~~gDi~D~~~L~~vf~~~~idaViHFAa~~~V 80 (329)
T COG1087 1 MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKLQFKFYEGDLLDRALLTAVFEENKIDAVVHFAASISV 80 (329)
T ss_pred CeEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhhccCceEEeccccHHHHHHHHHhcCCCEEEECcccccc
Confidence 68999999999999999999999999999876554332223322 68999999999999999974 6999998441
Q ss_pred -------------------hhhhcccccCCCEEEEecCcccccCC-----------CCcccccchHHHHHHHHHHHHHH-
Q 021854 174 -------------------FISNAGSLKGVQHVILLSQLSVYRGS-----------GGIQALMKGNARKLAEQDESMLM- 222 (306)
Q Consensus 174 -------------------~~~~~a~~~gvkr~V~iSS~~~~~~~-----------~~~~~~~~~~a~~~~~~aE~~l~- 222 (306)
.++++|++.+|++|||-||.++|..+ .+.++|.. .|...|+.|+
T Consensus 81 gESv~~Pl~Yy~NNv~gTl~Ll~am~~~gv~~~vFSStAavYG~p~~~PI~E~~~~~p~NPYG~-----sKlm~E~iL~d 155 (329)
T COG1087 81 GESVQNPLKYYDNNVVGTLNLIEAMLQTGVKKFIFSSTAAVYGEPTTSPISETSPLAPINPYGR-----SKLMSEEILRD 155 (329)
T ss_pred chhhhCHHHHHhhchHhHHHHHHHHHHhCCCEEEEecchhhcCCCCCcccCCCCCCCCCCcchh-----HHHHHHHHHHH
Confidence 16788999999999999999988632 22234433 3556677776
Q ss_pred ---hcCCCEEEEEcCc---------ccCCCC---------------CCcce-ee------ecCCCCccccCHHHHHHHHH
Q 021854 223 ---ASGIPYTIIRTGV---------LQNTPG---------------GKQGF-QF------EEGCAANGSLSKEDAAFICV 268 (306)
Q Consensus 223 ---~sgi~~tiiRPg~---------l~~~~~---------------~~~~~-~~------~~g~~~~~~Is~~DVA~~iv 268 (306)
..+++++++|--. +.+.+. ....+ +| ..|...+..||+.|+|++.+
T Consensus 156 ~~~a~~~~~v~LRYFN~aGA~~~G~iGe~~~~~thLip~~~q~A~G~r~~l~ifG~DY~T~DGT~iRDYIHV~DLA~aH~ 235 (329)
T COG1087 156 AAKANPFKVVILRYFNVAGACPDGTLGQRYPGATLLIPVAAEAALGKRDKLFIFGDDYDTKDGTCIRDYIHVDDLADAHV 235 (329)
T ss_pred HHHhCCCcEEEEEecccccCCCCCccCCCCCCcchHHHHHHHHHhcCCceeEEeCCCCCCCCCCeeeeeeehhHHHHHHH
Confidence 3689999999433 222111 01111 11 24445578999999999999
Q ss_pred HHhhCCC--CCCcEEEEecCCc-CHHHHHHHHHHHhhhc
Q 021854 269 EALESIP--QTGLIFEVVNGEE-KVSDWKKCFSRLMEKT 304 (306)
Q Consensus 269 ~aL~~~~--~~g~~~~v~~g~~-s~~d~~~l~~~l~~~~ 304 (306)
.+|+.-. ....+||+++|.- |+.|+.+.+.++.+++
T Consensus 236 ~Al~~L~~~g~~~~~NLG~G~G~SV~evi~a~~~vtg~~ 274 (329)
T COG1087 236 LALKYLKEGGSNNIFNLGSGNGFSVLEVIEAAKKVTGRD 274 (329)
T ss_pred HHHHHHHhCCceeEEEccCCCceeHHHHHHHHHHHhCCc
Confidence 9996432 2236999999885 8999999999998765
|
|
| >PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=4.3e-20 Score=173.69 Aligned_cols=202 Identities=13% Similarity=0.162 Sum_probs=144.4
Q ss_pred CeEEEEcCCChHHHHHHHHHHHC-CCeEEEEecCcchhhhhcC-CCceeeeccCC-CHHHHHHHhcCccEEEEcCC----
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVK-RTRIKALVKDKRNAMESFG-TYVESMAGDAS-NKKFLKTALRGVRSIICPSE---- 172 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~-g~~V~~l~R~~~~~~~~~~-~~v~~v~~D~~-d~~~l~~~~~~~d~vi~~~~---- 172 (306)
|+||||||+|+||++|+++|++. |++|+++.|+.++.....+ .+++++.+|+. +.+.+.++++++|+|||+++
T Consensus 2 ~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~d~ViH~aa~~~~ 81 (347)
T PRK11908 2 KKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLGDLVNHPRMHFFEGDITINKEWIEYHVKKCDVILPLVAIATP 81 (347)
T ss_pred cEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHhccCCCeEEEeCCCCCCHHHHHHHHcCCCEEEECcccCCh
Confidence 68999999999999999999986 6999999997755433333 36899999997 77888889999999999732
Q ss_pred c------------------hhhhcccccCCCEEEEecCcccccCCCC--cc---------ccc-c-hHHHHHHHHHHHHH
Q 021854 173 G------------------FISNAGSLKGVQHVILLSQLSVYRGSGG--IQ---------ALM-K-GNARKLAEQDESML 221 (306)
Q Consensus 173 g------------------~~~~~a~~~gvkr~V~iSS~~~~~~~~~--~~---------~~~-~-~~a~~~~~~aE~~l 221 (306)
. .+.+++++.+ ++||++||..+|..... .. +.. + ..+...|..+|.++
T Consensus 82 ~~~~~~p~~~~~~n~~~~~~ll~aa~~~~-~~~v~~SS~~vyg~~~~~~~~ee~~~~~~~~~~~p~~~Y~~sK~~~e~~~ 160 (347)
T PRK11908 82 ATYVKQPLRVFELDFEANLPIVRSAVKYG-KHLVFPSTSEVYGMCPDEEFDPEASPLVYGPINKPRWIYACSKQLMDRVI 160 (347)
T ss_pred HHhhcCcHHHHHHHHHHHHHHHHHHHhcC-CeEEEEecceeeccCCCcCcCccccccccCcCCCccchHHHHHHHHHHHH
Confidence 1 0345566666 79999999988753211 00 000 0 12333455566665
Q ss_pred H----hcCCCEEEEEcCcccCCC-------C---------------CCcceee-ecCCCCccccCHHHHHHHHHHHhhCC
Q 021854 222 M----ASGIPYTIIRTGVLQNTP-------G---------------GKQGFQF-EEGCAANGSLSKEDAAFICVEALESI 274 (306)
Q Consensus 222 ~----~sgi~~tiiRPg~l~~~~-------~---------------~~~~~~~-~~g~~~~~~Is~~DVA~~iv~aL~~~ 274 (306)
+ +.+++++++||+.+.... . .+..+.+ ..|+....+|+++|+|++++.+++++
T Consensus 161 ~~~~~~~~~~~~ilR~~~v~Gp~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~g~~~r~~i~v~D~a~a~~~~~~~~ 240 (347)
T PRK11908 161 WAYGMEEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGEPISLVDGGSQKRAFTDIDDGIDALMKIIENK 240 (347)
T ss_pred HHHHHHcCCCeEEEeeeeeeCCCccCCCccccCCcchHHHHHHHHhCCCceEEecCCceeeccccHHHHHHHHHHHHhCc
Confidence 4 479999999998753211 0 1112222 34555678999999999999999876
Q ss_pred C--CCCcEEEEecC--CcCHHHHHHHHHHHhh
Q 021854 275 P--QTGLIFEVVNG--EEKVSDWKKCFSRLME 302 (306)
Q Consensus 275 ~--~~g~~~~v~~g--~~s~~d~~~l~~~l~~ 302 (306)
. ..+++||++++ ..++.|+.+.+.+..+
T Consensus 241 ~~~~~g~~yni~~~~~~~s~~e~~~~i~~~~~ 272 (347)
T PRK11908 241 DGVASGKIYNIGNPKNNHSVRELANKMLELAA 272 (347)
T ss_pred cccCCCCeEEeCCCCCCcCHHHHHHHHHHHhc
Confidence 3 45789999985 3689999999987765
|
|
| >PLN02662 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.86 E-value=3.5e-20 Score=171.90 Aligned_cols=203 Identities=15% Similarity=0.144 Sum_probs=140.3
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhh---hh--c---CCCceeeeccCCCHHHHHHHhcCccEEEEc
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM---ES--F---GTYVESMAGDASNKKFLKTALRGVRSIICP 170 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~---~~--~---~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~ 170 (306)
+++||||||+|+||++++++|+++|++|++++|+.+... .. . ..+++++.+|+.|.+.+..+++++|+|||+
T Consensus 4 ~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~ 83 (322)
T PLN02662 4 GKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVVDGCEGVFHT 83 (322)
T ss_pred CCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHHHHHcCCCEEEEe
Confidence 589999999999999999999999999999999875421 11 1 236889999999999999999999999998
Q ss_pred CCc----------h-----------hhhccccc-CCCEEEEecCccc--ccCCC---C--c------ccc-c---chHHH
Q 021854 171 SEG----------F-----------ISNAGSLK-GVQHVILLSQLSV--YRGSG---G--I------QAL-M---KGNAR 211 (306)
Q Consensus 171 ~~g----------~-----------~~~~a~~~-gvkr~V~iSS~~~--~~~~~---~--~------~~~-~---~~~a~ 211 (306)
++. . +.+++.+. +++|||++||.++ |.... . . .+. . .+.+.
T Consensus 84 A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~v~~SS~~~~~y~~~~~~~~~~~~E~~~~~p~~~~~~~~~Y~ 163 (322)
T PLN02662 84 ASPFYHDVTDPQAELIDPAVKGTLNVLRSCAKVPSVKRVVVTSSMAAVAYNGKPLTPDVVVDETWFSDPAFCEESKLWYV 163 (322)
T ss_pred CCcccCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEccCHHHhcCCCcCCCCCCcCCcccCCChhHhhcccchHH
Confidence 431 0 23344555 8999999999764 32111 0 0 000 0 01122
Q ss_pred HHHHHHHHHH----HhcCCCEEEEEcCcccCCCCCCc-cee-------e----ecCCCCccccCHHHHHHHHHHHhhCCC
Q 021854 212 KLAEQDESML----MASGIPYTIIRTGVLQNTPGGKQ-GFQ-------F----EEGCAANGSLSKEDAAFICVEALESIP 275 (306)
Q Consensus 212 ~~~~~aE~~l----~~sgi~~tiiRPg~l~~~~~~~~-~~~-------~----~~g~~~~~~Is~~DVA~~iv~aL~~~~ 275 (306)
..|..+|.++ ++.+++++++||+.+........ ... + ..++....+|+++|+|++++.+++.+.
T Consensus 164 ~sK~~~E~~~~~~~~~~~~~~~~lRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~ 243 (322)
T PLN02662 164 LSKTLAEEAAWKFAKENGIDMVTINPAMVIGPLLQPTLNTSAEAILNLINGAQTFPNASYRWVDVRDVANAHIQAFEIPS 243 (322)
T ss_pred HHHHHHHHHHHHHHHHcCCcEEEEeCCcccCCCCCCCCCchHHHHHHHhcCCccCCCCCcCeEEHHHHHHHHHHHhcCcC
Confidence 2344555544 45799999999998653221100 000 0 112344678999999999999998765
Q ss_pred CCCcEEEEecCCcCHHHHHHHHHHHhh
Q 021854 276 QTGLIFEVVNGEEKVSDWKKCFSRLME 302 (306)
Q Consensus 276 ~~g~~~~v~~g~~s~~d~~~l~~~l~~ 302 (306)
..+ .|++.+.+.++.|+.+++.+...
T Consensus 244 ~~~-~~~~~g~~~s~~e~~~~i~~~~~ 269 (322)
T PLN02662 244 ASG-RYCLVERVVHYSEVVKILHELYP 269 (322)
T ss_pred cCC-cEEEeCCCCCHHHHHHHHHHHCC
Confidence 444 68888766789999998887643
|
|
| >COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.85 E-value=2.5e-20 Score=179.86 Aligned_cols=232 Identities=21% Similarity=0.258 Sum_probs=178.6
Q ss_pred HHHHHhcCcccccccCCCCCCCCCCCCCccCCCCCCCCccCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEecCcchh
Q 021854 58 ILDYIEGGPKLRKWYGAPDLLPKDGSNEEDEEKEDEFPEEARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNA 136 (306)
Q Consensus 58 ~l~~~~~g~~lr~w~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~l~R~~~~~ 136 (306)
+-|.+..+..+|+ ..-.|+|.|++...+. ........+|+||||||+|.||+++++|+++.+. ++++++|+.-+.
T Consensus 213 ~~~l~~~~~~lre-I~ieDLLgR~pV~~d~---~~i~~~~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~ 288 (588)
T COG1086 213 LTDLKDLNGQLRE-IEIEDLLGRPPVALDT---ELIGAMLTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKL 288 (588)
T ss_pred HHHHHHhcccccc-CCHHHHhCCCCCCCCH---HHHHhHcCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHH
Confidence 3333334444776 5556999988876655 4445566789999999999999999999999996 777888888652
Q ss_pred -------hhhcC-CCceeeeccCCCHHHHHHHhcC--ccEEEEcCC--------------------c--hhhhcccccCC
Q 021854 137 -------MESFG-TYVESMAGDASNKKFLKTALRG--VRSIICPSE--------------------G--FISNAGSLKGV 184 (306)
Q Consensus 137 -------~~~~~-~~v~~v~~D~~d~~~l~~~~~~--~d~vi~~~~--------------------g--~~~~~a~~~gv 184 (306)
.+.++ .++.++.+|+.|.+.++.++++ +|+|||+++ | .++++|.+.||
T Consensus 289 ~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~kvd~VfHAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~~V 368 (588)
T COG1086 289 YLIDMELREKFPELKLRFYIGDVRDRDRVERAMEGHKVDIVFHAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKNGV 368 (588)
T ss_pred HHHHHHHHhhCCCcceEEEecccccHHHHHHHHhcCCCceEEEhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHhCC
Confidence 22334 4788999999999999999999 899999844 1 16678899999
Q ss_pred CEEEEecCcccccCCCCcccccchHHHHHHHHHHHHHHh-----c--CCCEEEEEcCcccCCCC-----------CCcce
Q 021854 185 QHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMA-----S--GIPYTIIRTGVLQNTPG-----------GKQGF 246 (306)
Q Consensus 185 kr~V~iSS~~~~~~~~~~~~~~~~~a~~~~~~aE~~l~~-----s--gi~~tiiRPg~l~~~~~-----------~~~~~ 246 (306)
++||++||.++.+|.+.++.. |+.+|.++++ + +..++++|.|+.....+ .+.++
T Consensus 369 ~~~V~iSTDKAV~PtNvmGaT--------Kr~aE~~~~a~~~~~~~~~T~f~~VRFGNVlGSrGSViPlFk~QI~~Ggpl 440 (588)
T COG1086 369 KKFVLISTDKAVNPTNVMGAT--------KRLAEKLFQAANRNVSGTGTRFCVVRFGNVLGSRGSVIPLFKKQIAEGGPL 440 (588)
T ss_pred CEEEEEecCcccCCchHhhHH--------HHHHHHHHHHHhhccCCCCcEEEEEEecceecCCCCCHHHHHHHHHcCCCc
Confidence 999999999999999888766 7788888764 2 37789999999654433 33444
Q ss_pred eeecCCCCccccCHHHHHHHHHHHhhCCCCCCcEEEEecCC-cCHHHHHHHHHHHhh
Q 021854 247 QFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVVNGE-EKVSDWKKCFSRLME 302 (306)
Q Consensus 247 ~~~~g~~~~~~Is~~DVA~~iv~aL~~~~~~g~~~~v~~g~-~s~~d~~~l~~~l~~ 302 (306)
.++.++--+-+++..|.++.++.+... ...|.+|-+--|+ .++.|+++..-++.+
T Consensus 441 TvTdp~mtRyfMTI~EAv~LVlqA~a~-~~gGeifvldMGepvkI~dLAk~mi~l~g 496 (588)
T COG1086 441 TVTDPDMTRFFMTIPEAVQLVLQAGAI-AKGGEIFVLDMGEPVKIIDLAKAMIELAG 496 (588)
T ss_pred cccCCCceeEEEEHHHHHHHHHHHHhh-cCCCcEEEEcCCCCeEHHHHHHHHHHHhC
Confidence 444444445678889999999998865 4567899999865 588999988887775
|
|
| >PLN02572 UDP-sulfoquinovose synthase | Back alignment and domain information |
|---|
Probab=99.85 E-value=9.1e-20 Score=177.19 Aligned_cols=205 Identities=19% Similarity=0.202 Sum_probs=142.9
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcch--------------------hh---hhcCCCceeeeccCC
Q 021854 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN--------------------AM---ESFGTYVESMAGDAS 152 (306)
Q Consensus 96 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~--------------------~~---~~~~~~v~~v~~D~~ 152 (306)
..++|+||||||+||||++|+++|+++|++|+++.|.... +. .....+++++.+|++
T Consensus 44 ~~~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 123 (442)
T PLN02572 44 SSKKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELYVGDIC 123 (442)
T ss_pred cccCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceEEECCCC
Confidence 4457899999999999999999999999999998642210 00 001236889999999
Q ss_pred CHHHHHHHhcC--ccEEEEcCCc----h---------------------hhhcccccCCC-EEEEecCcccccCCCC---
Q 021854 153 NKKFLKTALRG--VRSIICPSEG----F---------------------ISNAGSLKGVQ-HVILLSQLSVYRGSGG--- 201 (306)
Q Consensus 153 d~~~l~~~~~~--~d~vi~~~~g----~---------------------~~~~a~~~gvk-r~V~iSS~~~~~~~~~--- 201 (306)
|.+.+.+++++ +|+|||+++. . +.+++++.+++ +||++||..+|.....
T Consensus 124 d~~~v~~~l~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~gv~~~~V~~SS~~vYG~~~~~~~ 203 (442)
T PLN02572 124 DFEFLSEAFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFAPDCHLVKLGTMGEYGTPNIDIE 203 (442)
T ss_pred CHHHHHHHHHhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhCCCccEEEEecceecCCCCCCCc
Confidence 99999999984 7999998421 0 33456677886 9999999988853210
Q ss_pred ---c------------ccccc-hHHHHHHHHHHHHH----HhcCCCEEEEEcCcccCCCC--------------------
Q 021854 202 ---I------------QALMK-GNARKLAEQDESML----MASGIPYTIIRTGVLQNTPG-------------------- 241 (306)
Q Consensus 202 ---~------------~~~~~-~~a~~~~~~aE~~l----~~sgi~~tiiRPg~l~~~~~-------------------- 241 (306)
. ....+ ..+...|..+|.++ +..+++++++||+.+.....
T Consensus 204 E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~~gl~~v~lR~~~vyGp~~~~~~~~~~li~~~~~~~~~~ 283 (442)
T PLN02572 204 EGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETMMDEELINRLDYDGVFG 283 (442)
T ss_pred ccccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHhcCCCEEEEecccccCCCCcccccccccccccCcccchh
Confidence 0 00011 11223344445554 34699999999998543210
Q ss_pred -----------CCcce-eeecCCCCccccCHHHHHHHHHHHhhCCCCCC--cEEEEecCCcCHHHHHHHHHHH
Q 021854 242 -----------GKQGF-QFEEGCAANGSLSKEDAAFICVEALESIPQTG--LIFEVVNGEEKVSDWKKCFSRL 300 (306)
Q Consensus 242 -----------~~~~~-~~~~g~~~~~~Is~~DVA~~iv~aL~~~~~~g--~~~~v~~g~~s~~d~~~l~~~l 300 (306)
.+..+ .++.|+....+++++|+|++++.+++++...+ .+||+++++.++.++.+++.++
T Consensus 284 ~~i~~~~~~~~~g~~i~v~g~G~~~Rdfi~V~Dva~a~~~al~~~~~~g~~~i~Nigs~~~si~el~~~i~~~ 356 (442)
T PLN02572 284 TALNRFCVQAAVGHPLTVYGKGGQTRGFLDIRDTVRCIEIAIANPAKPGEFRVFNQFTEQFSVNELAKLVTKA 356 (442)
T ss_pred hHHHHHHHHHhcCCCceecCCCCEEECeEEHHHHHHHHHHHHhChhhcCceeEEEeCCCceeHHHHHHHHHHH
Confidence 01222 23455666799999999999999998653333 5899987777999999999988
|
|
| >TIGR03466 HpnA hopanoid-associated sugar epimerase | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.1e-19 Score=168.43 Aligned_cols=202 Identities=17% Similarity=0.193 Sum_probs=144.9
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcCCch-----
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEGF----- 174 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~g~----- 174 (306)
|+|+||||+|+||+++++.|++.|++|+++.|+.++.......+++++.+|+.|.+++.++++++|+|||+++..
T Consensus 1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~d~vi~~a~~~~~~~~ 80 (328)
T TIGR03466 1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNLEGLDVEIVEGDLRDPASLRKAVAGCRALFHVAADYRLWAP 80 (328)
T ss_pred CeEEEECCccchhHHHHHHHHHCCCEEEEEEecCccccccccCCceEEEeeCCCHHHHHHHHhCCCEEEEeceecccCCC
Confidence 479999999999999999999999999999998766433333468899999999999999999999999984210
Q ss_pred ---------------hhhcccccCCCEEEEecCcccccCC-CC--cc---ccc----chHHHHHHHHHHHHHHh----cC
Q 021854 175 ---------------ISNAGSLKGVQHVILLSQLSVYRGS-GG--IQ---ALM----KGNARKLAEQDESMLMA----SG 225 (306)
Q Consensus 175 ---------------~~~~a~~~gvkr~V~iSS~~~~~~~-~~--~~---~~~----~~~a~~~~~~aE~~l~~----sg 225 (306)
+.+++.+.++++||++||..++... .+ .. ... ...+...|..+|.++++ .+
T Consensus 81 ~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~ 160 (328)
T TIGR03466 81 DPEEMYAANVEGTRNLLRAALEAGVERVVYTSSVATLGVRGDGTPADETTPSSLDDMIGHYKRSKFLAEQAALEMAAEKG 160 (328)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEechhhcCcCCCCCCcCccCCCCcccccChHHHHHHHHHHHHHHHHHhcC
Confidence 3455667889999999998877531 11 00 000 01223345555655543 58
Q ss_pred CCEEEEEcCcccCCCCC-Cc------------ceeeecCCCCccccCHHHHHHHHHHHhhCCCCCCcEEEEecCCcCHHH
Q 021854 226 IPYTIIRTGVLQNTPGG-KQ------------GFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVVNGEEKVSD 292 (306)
Q Consensus 226 i~~tiiRPg~l~~~~~~-~~------------~~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~~~g~~~~v~~g~~s~~d 292 (306)
++++++||+.+...... .. ... ...+....+++++|+|++++.+++.+. .+..|++.+.+.++.|
T Consensus 161 ~~~~ilR~~~~~G~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~v~D~a~a~~~~~~~~~-~~~~~~~~~~~~s~~e 238 (328)
T TIGR03466 161 LPVVIVNPSTPIGPRDIKPTPTGRIIVDFLNGKMP-AYVDTGLNLVHVDDVAEGHLLALERGR-IGERYILGGENLTLKQ 238 (328)
T ss_pred CCEEEEeCCccCCCCCCCCCcHHHHHHHHHcCCCc-eeeCCCcceEEHHHHHHHHHHHHhCCC-CCceEEecCCCcCHHH
Confidence 99999999986432111 00 011 112333568999999999999998754 5678988766678999
Q ss_pred HHHHHHHHhhh
Q 021854 293 WKKCFSRLMEK 303 (306)
Q Consensus 293 ~~~l~~~l~~~ 303 (306)
+.+.+.++.++
T Consensus 239 ~~~~i~~~~g~ 249 (328)
T TIGR03466 239 ILDKLAEITGR 249 (328)
T ss_pred HHHHHHHHhCC
Confidence 99988887664
|
The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. |
| >PLN02650 dihydroflavonol-4-reductase | Back alignment and domain information |
|---|
Probab=99.85 E-value=9.9e-20 Score=171.46 Aligned_cols=202 Identities=14% Similarity=0.148 Sum_probs=138.6
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhh---hc---C--CCceeeeccCCCHHHHHHHhcCccEEEEc
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SF---G--TYVESMAGDASNKKFLKTALRGVRSIICP 170 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~---~~---~--~~v~~v~~D~~d~~~l~~~~~~~d~vi~~ 170 (306)
.++||||||+||||++++++|+++|++|++++|+.+.... .. + .+++++.+|+.|.+.+.++++++|+|||+
T Consensus 5 ~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~d~ViH~ 84 (351)
T PLN02650 5 KETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIRGCTGVFHV 84 (351)
T ss_pred CCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHhCCCEEEEe
Confidence 5799999999999999999999999999999998755321 11 1 25788999999999999999999999998
Q ss_pred CCch---------------------hhhcccccC-CCEEEEecCcccccCCCCc-ccc----------------cchHHH
Q 021854 171 SEGF---------------------ISNAGSLKG-VQHVILLSQLSVYRGSGGI-QAL----------------MKGNAR 211 (306)
Q Consensus 171 ~~g~---------------------~~~~a~~~g-vkr~V~iSS~~~~~~~~~~-~~~----------------~~~~a~ 211 (306)
++.. +.+++.+.+ +++||++||.+++...... ..+ ....+.
T Consensus 85 A~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~r~v~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~ 164 (351)
T PLN02650 85 ATPMDFESKDPENEVIKPTVNGMLSIMKACAKAKTVRRIVFTSSAGTVNVEEHQKPVYDEDCWSDLDFCRRKKMTGWMYF 164 (351)
T ss_pred CCCCCCCCCCchhhhhhHHHHHHHHHHHHHHhcCCceEEEEecchhhcccCCCCCCccCcccCCchhhhhccccccchHH
Confidence 3210 234455555 7899999998665321100 000 001233
Q ss_pred HHHHHHHHHH----HhcCCCEEEEEcCcccCCCCCC---------------cceeeecCCCCccccCHHHHHHHHHHHhh
Q 021854 212 KLAEQDESML----MASGIPYTIIRTGVLQNTPGGK---------------QGFQFEEGCAANGSLSKEDAAFICVEALE 272 (306)
Q Consensus 212 ~~~~~aE~~l----~~sgi~~tiiRPg~l~~~~~~~---------------~~~~~~~g~~~~~~Is~~DVA~~iv~aL~ 272 (306)
..|..+|.++ ++.+++++++||+.+....... ....+ .......+++++|+|++++.+++
T Consensus 165 ~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~r~~v~V~Dva~a~~~~l~ 243 (351)
T PLN02650 165 VSKTLAEKAAWKYAAENGLDFISIIPTLVVGPFISTSMPPSLITALSLITGNEAHY-SIIKQGQFVHLDDLCNAHIFLFE 243 (351)
T ss_pred HHHHHHHHHHHHHHHHcCCeEEEECCCceECCCCCCCCCccHHHHHHHhcCCcccc-CcCCCcceeeHHHHHHHHHHHhc
Confidence 3455555544 3469999999999854321100 00001 01123578999999999999998
Q ss_pred CCCCCCcEEEEecCCcCHHHHHHHHHHHhh
Q 021854 273 SIPQTGLIFEVVNGEEKVSDWKKCFSRLME 302 (306)
Q Consensus 273 ~~~~~g~~~~v~~g~~s~~d~~~l~~~l~~ 302 (306)
++...+ .|++.+.+.++.++.+++.++..
T Consensus 244 ~~~~~~-~~i~~~~~~s~~el~~~i~~~~~ 272 (351)
T PLN02650 244 HPAAEG-RYICSSHDATIHDLAKMLREKYP 272 (351)
T ss_pred CcCcCc-eEEecCCCcCHHHHHHHHHHhCc
Confidence 765444 68655556789999999887653
|
|
| >PLN02989 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.8e-19 Score=167.64 Aligned_cols=204 Identities=14% Similarity=0.159 Sum_probs=141.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhh---hc-----CCCceeeeccCCCHHHHHHHhcCccEEEE
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SF-----GTYVESMAGDASNKKFLKTALRGVRSIIC 169 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~---~~-----~~~v~~v~~D~~d~~~l~~~~~~~d~vi~ 169 (306)
.+|+||||||+|+||++++++|+++|++|++++|+..+... .. ..+++++.+|++|.+.+.++++++|+|||
T Consensus 4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih 83 (325)
T PLN02989 4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAIDGCETVFH 83 (325)
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHcCCCEEEE
Confidence 46899999999999999999999999999999988764221 11 13688899999999999999999999999
Q ss_pred cCCch----------------------hhhccccc-CCCEEEEecCcccccCCC----C---cc---ccc-------chH
Q 021854 170 PSEGF----------------------ISNAGSLK-GVQHVILLSQLSVYRGSG----G---IQ---ALM-------KGN 209 (306)
Q Consensus 170 ~~~g~----------------------~~~~a~~~-gvkr~V~iSS~~~~~~~~----~---~~---~~~-------~~~ 209 (306)
+++.. +.+++.+. ++++||++||..++.... . .. ... ...
T Consensus 84 ~A~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~~~ 163 (325)
T PLN02989 84 TASPVAITVKTDPQVELINPAVNGTINVLRTCTKVSSVKRVILTSSMAAVLAPETKLGPNDVVDETFFTNPSFAEERKQW 163 (325)
T ss_pred eCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecchhheecCCccCCCCCccCcCCCCchhHhcccccc
Confidence 84310 22334443 578999999987653211 0 00 000 011
Q ss_pred HHHHHHHHHHHHH----hcCCCEEEEEcCcccCCCCCC-ccee----e-------ecCCCCccccCHHHHHHHHHHHhhC
Q 021854 210 ARKLAEQDESMLM----ASGIPYTIIRTGVLQNTPGGK-QGFQ----F-------EEGCAANGSLSKEDAAFICVEALES 273 (306)
Q Consensus 210 a~~~~~~aE~~l~----~sgi~~tiiRPg~l~~~~~~~-~~~~----~-------~~g~~~~~~Is~~DVA~~iv~aL~~ 273 (306)
+...|..+|.++. ..+++++++||+.+....... ..+. . ..+.....+++++|+|++++.+++.
T Consensus 164 Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~i~~~~~~~~~~~~~~r~~i~v~Dva~a~~~~l~~ 243 (325)
T PLN02989 164 YVLSKTLAEDAAWRFAKDNEIDLIVLNPGLVTGPILQPTLNFSVAVIVELMKGKNPFNTTHHRFVDVRDVALAHVKALET 243 (325)
T ss_pred hHHHHHHHHHHHHHHHHHcCCeEEEEcCCceeCCCCCCCCCchHHHHHHHHcCCCCCCCcCcCeeEHHHHHHHHHHHhcC
Confidence 3334555665554 468999999999865322110 0000 0 0111224689999999999999987
Q ss_pred CCCCCcEEEEecCCcCHHHHHHHHHHHhh
Q 021854 274 IPQTGLIFEVVNGEEKVSDWKKCFSRLME 302 (306)
Q Consensus 274 ~~~~g~~~~v~~g~~s~~d~~~l~~~l~~ 302 (306)
+.. +..|++.+++.++.++.+++.++.+
T Consensus 244 ~~~-~~~~ni~~~~~s~~ei~~~i~~~~~ 271 (325)
T PLN02989 244 PSA-NGRYIIDGPVVTIKDIENVLREFFP 271 (325)
T ss_pred ccc-CceEEEecCCCCHHHHHHHHHHHCC
Confidence 654 4589997676799999999988764
|
|
| >PRK10217 dTDP-glucose 4,6-dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.7e-19 Score=168.43 Aligned_cols=202 Identities=14% Similarity=0.107 Sum_probs=138.1
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcch---hh---hhc-CCCceeeeccCCCHHHHHHHhcC--ccEEEEc
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN---AM---ESF-GTYVESMAGDASNKKFLKTALRG--VRSIICP 170 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~---~~---~~~-~~~v~~v~~D~~d~~~l~~~~~~--~d~vi~~ 170 (306)
++||||||||+||++++++|+++|++++++.+..++ .. ... ..+++++.+|++|.+.+++++++ +|+|||+
T Consensus 2 ~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~Vih~ 81 (355)
T PRK10217 2 RKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICDRAELARVFTEHQPDCVMHL 81 (355)
T ss_pred cEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccccchhhhhhcccCCceEEEECCCcChHHHHHHHhhcCCCEEEEC
Confidence 689999999999999999999999886655443321 11 111 12577889999999999999985 8999998
Q ss_pred CCch----------------------hhhcccc---------cCCCEEEEecCcccccCCCC----c----ccccchHHH
Q 021854 171 SEGF----------------------ISNAGSL---------KGVQHVILLSQLSVYRGSGG----I----QALMKGNAR 211 (306)
Q Consensus 171 ~~g~----------------------~~~~a~~---------~gvkr~V~iSS~~~~~~~~~----~----~~~~~~~a~ 211 (306)
++.. +.+++.+ .++++||++||..+|....+ . .....+.+.
T Consensus 82 A~~~~~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~E~~~~~p~s~Y~ 161 (355)
T PRK10217 82 AAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYS 161 (355)
T ss_pred CcccCcchhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCCCCCCCCcCCCCCCCCCChhH
Confidence 4310 2334433 35789999999877652110 0 000011223
Q ss_pred HHHHHHHHHH----HhcCCCEEEEEcCcccCCCC--------------CCcce-eeecCCCCccccCHHHHHHHHHHHhh
Q 021854 212 KLAEQDESML----MASGIPYTIIRTGVLQNTPG--------------GKQGF-QFEEGCAANGSLSKEDAAFICVEALE 272 (306)
Q Consensus 212 ~~~~~aE~~l----~~sgi~~tiiRPg~l~~~~~--------------~~~~~-~~~~g~~~~~~Is~~DVA~~iv~aL~ 272 (306)
..|..+|.++ ++.+++++++||+.+..... .+..+ .++.|+...++++++|+|+++..+++
T Consensus 162 ~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~D~a~a~~~~~~ 241 (355)
T PRK10217 162 ASKASSDHLVRAWLRTYGLPTLITNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQIRDWLYVEDHARALYCVAT 241 (355)
T ss_pred HHHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCCcccHHHHHHHHHhcCCCceEeCCCCeeeCcCcHHHHHHHHHHHHh
Confidence 3344444444 45789999999998543211 12222 23566667899999999999999997
Q ss_pred CCCCCCcEEEEecCCc-CHHHHHHHHHHHhh
Q 021854 273 SIPQTGLIFEVVNGEE-KVSDWKKCFSRLME 302 (306)
Q Consensus 273 ~~~~~g~~~~v~~g~~-s~~d~~~l~~~l~~ 302 (306)
... .+++||+++++. ++.++.+.+.++.+
T Consensus 242 ~~~-~~~~yni~~~~~~s~~~~~~~i~~~~~ 271 (355)
T PRK10217 242 TGK-VGETYNIGGHNERKNLDVVETICELLE 271 (355)
T ss_pred cCC-CCCeEEeCCCCcccHHHHHHHHHHHhc
Confidence 643 468999998764 78898888877665
|
|
| >PLN02583 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.84 E-value=4.2e-19 Score=163.76 Aligned_cols=202 Identities=15% Similarity=0.144 Sum_probs=137.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcch--h----hhh--cCCCceeeeccCCCHHHHHHHhcCccEEEE
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN--A----MES--FGTYVESMAGDASNKKFLKTALRGVRSIIC 169 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~--~----~~~--~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~ 169 (306)
.+++|+||||+|+||++++++|+++|++|++++|+.++ . ... .+.+++++.+|++|.+.+..++.++|.|+|
T Consensus 5 ~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~~~~~l~~~d~v~~ 84 (297)
T PLN02583 5 SSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGLSCEEERLKVFDVDPLDYHSILDALKGCSGLFC 84 (297)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHHhcccCCCceEEEEecCCCHHHHHHHHcCCCEEEE
Confidence 46899999999999999999999999999999996432 1 111 123688899999999999999999999998
Q ss_pred cCC---ch-----------------hhhccccc-CCCEEEEecCcccccC--C-CC----cc-------cccc---hHHH
Q 021854 170 PSE---GF-----------------ISNAGSLK-GVQHVILLSQLSVYRG--S-GG----IQ-------ALMK---GNAR 211 (306)
Q Consensus 170 ~~~---g~-----------------~~~~a~~~-gvkr~V~iSS~~~~~~--~-~~----~~-------~~~~---~~a~ 211 (306)
..+ .. +.+++.+. +++|||++||.+++.. . .. .. .+.. ..+.
T Consensus 85 ~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~riV~~SS~~a~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~ 164 (297)
T PLN02583 85 CFDPPSDYPSYDEKMVDVEVRAAHNVLEACAQTDTIEKVVFTSSLTAVIWRDDNISTQKDVDERSWSDQNFCRKFKLWHA 164 (297)
T ss_pred eCccCCcccccHHHHHHHHHHHHHHHHHHHHhcCCccEEEEecchHheecccccCCCCCCCCcccCCCHHHHhhcccHHH
Confidence 521 10 33445554 6899999999876421 1 00 00 0000 0122
Q ss_pred HHHHHHHHHH----HhcCCCEEEEEcCcccCCCCC-C----cceeeecCCCCccccCHHHHHHHHHHHhhCCCCCCcEEE
Q 021854 212 KLAEQDESML----MASGIPYTIIRTGVLQNTPGG-K----QGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFE 282 (306)
Q Consensus 212 ~~~~~aE~~l----~~sgi~~tiiRPg~l~~~~~~-~----~~~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~~~g~~~~ 282 (306)
..|..+|+++ +..++++++|||+++...... . .+.....+.....+|+++|||++++.+++.+...+ .|.
T Consensus 165 ~sK~~aE~~~~~~~~~~gi~~v~lrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~v~V~Dva~a~~~al~~~~~~~-r~~ 243 (297)
T PLN02583 165 LAKTLSEKTAWALAMDRGVNMVSINAGLLMGPSLTQHNPYLKGAAQMYENGVLVTVDVNFLVDAHIRAFEDVSSYG-RYL 243 (297)
T ss_pred HHHHHHHHHHHHHHHHhCCcEEEEcCCcccCCCCCCchhhhcCCcccCcccCcceEEHHHHHHHHHHHhcCcccCC-cEE
Confidence 2355566655 346999999999986532211 1 11101122334578999999999999999776666 698
Q ss_pred EecCCcC-HHHHHHHHHHH
Q 021854 283 VVNGEEK-VSDWKKCFSRL 300 (306)
Q Consensus 283 v~~g~~s-~~d~~~l~~~l 300 (306)
+.++..+ ..++.+++.+.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~ 262 (297)
T PLN02583 244 CFNHIVNTEEDAVKLAQML 262 (297)
T ss_pred EecCCCccHHHHHHHHHHh
Confidence 8887765 46788877764
|
|
| >PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.7e-19 Score=181.94 Aligned_cols=206 Identities=13% Similarity=0.114 Sum_probs=147.4
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHC-CCeEEEEecCcchhhhhcC-CCceeeeccCCCHHH-HHHHhcCccEEEEcCC
Q 021854 96 EEARDAVLVTDGDSDIGQMVILSLIVK-RTRIKALVKDKRNAMESFG-TYVESMAGDASNKKF-LKTALRGVRSIICPSE 172 (306)
Q Consensus 96 ~~~~~~ilVtGatG~iG~~l~~~L~~~-g~~V~~l~R~~~~~~~~~~-~~v~~v~~D~~d~~~-l~~~~~~~d~vi~~~~ 172 (306)
...+|+||||||+||||++++++|+++ |++|++++|.........+ .+++++.+|++|... ++++++++|+|||+++
T Consensus 312 ~~~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~gDl~d~~~~l~~~l~~~D~ViHlAa 391 (660)
T PRK08125 312 AKRRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISRFLGHPRFHFVEGDISIHSEWIEYHIKKCDVVLPLVA 391 (660)
T ss_pred hhcCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhhhcCCCceEEEeccccCcHHHHHHHhcCCCEEEECcc
Confidence 345789999999999999999999986 7999999998754332222 368899999998655 6788999999999732
Q ss_pred --c---h-----------------hhhcccccCCCEEEEecCcccccCCCC--c---------cccc--chHHHHHHHHH
Q 021854 173 --G---F-----------------ISNAGSLKGVQHVILLSQLSVYRGSGG--I---------QALM--KGNARKLAEQD 217 (306)
Q Consensus 173 --g---~-----------------~~~~a~~~gvkr~V~iSS~~~~~~~~~--~---------~~~~--~~~a~~~~~~a 217 (306)
. . +.+++.+.+ ++|||+||..+|..... . .+.. .+.+...|..+
T Consensus 392 ~~~~~~~~~~~~~~~~~Nv~~t~~ll~a~~~~~-~~~V~~SS~~vyg~~~~~~~~E~~~~~~~~p~~~p~s~Yg~sK~~~ 470 (660)
T PRK08125 392 IATPIEYTRNPLRVFELDFEENLKIIRYCVKYN-KRIIFPSTSEVYGMCTDKYFDEDTSNLIVGPINKQRWIYSVSKQLL 470 (660)
T ss_pred ccCchhhccCHHHHHHhhHHHHHHHHHHHHhcC-CeEEEEcchhhcCCCCCCCcCccccccccCCCCCCccchHHHHHHH
Confidence 1 0 335566777 89999999887753211 0 0000 01234456666
Q ss_pred HHHHH----hcCCCEEEEEcCcccCCCC----------------------CCccee-eecCCCCccccCHHHHHHHHHHH
Q 021854 218 ESMLM----ASGIPYTIIRTGVLQNTPG----------------------GKQGFQ-FEEGCAANGSLSKEDAAFICVEA 270 (306)
Q Consensus 218 E~~l~----~sgi~~tiiRPg~l~~~~~----------------------~~~~~~-~~~g~~~~~~Is~~DVA~~iv~a 270 (306)
|.+++ ..+++++++||+.+..... .+..+. ++.|.....+++++|+|++++.+
T Consensus 471 E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~i~~~i~~~~~~~~i~~~g~g~~~rd~i~v~Dva~a~~~~ 550 (660)
T PRK08125 471 DRVIWAYGEKEGLRFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLVDGGKQKRCFTDIRDGIEALFRI 550 (660)
T ss_pred HHHHHHHHHhcCCceEEEEEceeeCCCccccccccccccchHHHHHHHhcCCCCeEEeCCCceeeceeeHHHHHHHHHHH
Confidence 77664 4689999999998542210 012222 24556668899999999999999
Q ss_pred hhCCC--CCCcEEEEecCC--cCHHHHHHHHHHHhh
Q 021854 271 LESIP--QTGLIFEVVNGE--EKVSDWKKCFSRLME 302 (306)
Q Consensus 271 L~~~~--~~g~~~~v~~g~--~s~~d~~~l~~~l~~ 302 (306)
++++. ..+++||+++++ .++.++.+++.+..+
T Consensus 551 l~~~~~~~~g~iyni~~~~~~~s~~el~~~i~~~~g 586 (660)
T PRK08125 551 IENKDNRCDGQIINIGNPDNEASIRELAEMLLASFE 586 (660)
T ss_pred HhccccccCCeEEEcCCCCCceeHHHHHHHHHHHhc
Confidence 98653 347899999873 689999999988765
|
|
| >TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.83 E-value=3.8e-19 Score=166.12 Aligned_cols=194 Identities=19% Similarity=0.281 Sum_probs=139.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCC--CeEEEEecCcchhh---hhc-CCCceeeeccCCCHHHHHHHhcCccEEEEcC
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRNAM---ESF-GTYVESMAGDASNKKFLKTALRGVRSIICPS 171 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g--~~V~~l~R~~~~~~---~~~-~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~ 171 (306)
++++||||||+|+||++++++|+++| ++|++++|+..+.. ... ..+++++.+|++|.+.+.++++++|+|||++
T Consensus 3 ~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~~~~iD~Vih~A 82 (324)
T TIGR03589 3 NNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVRDKERLTRALRGVDYVVHAA 82 (324)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHhcCCEEEECc
Confidence 46899999999999999999999986 78999998765422 112 2368899999999999999999999999984
Q ss_pred Cc----------------------hhhhcccccCCCEEEEecCcccccCCCCcccccchHHHHHHHHHHHHH-------H
Q 021854 172 EG----------------------FISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESML-------M 222 (306)
Q Consensus 172 ~g----------------------~~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~~~~~aE~~l-------~ 222 (306)
+. .+.+++.+.++++||++||.....+ ...|..+ |..+|.++ .
T Consensus 83 g~~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~~~~~iV~~SS~~~~~p---~~~Y~~s-----K~~~E~l~~~~~~~~~ 154 (324)
T TIGR03589 83 ALKQVPAAEYNPFECIRTNINGAQNVIDAAIDNGVKRVVALSTDKAANP---INLYGAT-----KLASDKLFVAANNISG 154 (324)
T ss_pred ccCCCchhhcCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeCCCCCCC---CCHHHHH-----HHHHHHHHHHHHhhcc
Confidence 31 0345567788999999999765433 2334332 33444443 2
Q ss_pred hcCCCEEEEEcCcccCCCC-----------CCc-ceeeecCCCCccccCHHHHHHHHHHHhhCCCCCCcEEEEecCCcCH
Q 021854 223 ASGIPYTIIRTGVLQNTPG-----------GKQ-GFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVVNGEEKV 290 (306)
Q Consensus 223 ~sgi~~tiiRPg~l~~~~~-----------~~~-~~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~~~g~~~~v~~g~~s~ 290 (306)
..+++++++|||.+..... .+. .+.+..+.....+++++|+|++++.+++.. ..+++|...+.+.++
T Consensus 155 ~~gi~~~~lR~g~v~G~~~~~i~~~~~~~~~~~~~~~i~~~~~~r~~i~v~D~a~a~~~al~~~-~~~~~~~~~~~~~sv 233 (324)
T TIGR03589 155 SKGTRFSVVRYGNVVGSRGSVVPFFKSLKEEGVTELPITDPRMTRFWITLEQGVNFVLKSLERM-LGGEIFVPKIPSMKI 233 (324)
T ss_pred ccCcEEEEEeecceeCCCCCcHHHHHHHHHhCCCCeeeCCCCceEeeEEHHHHHHHHHHHHhhC-CCCCEEccCCCcEEH
Confidence 4689999999998654221 111 233333444467899999999999999864 345788533344688
Q ss_pred HHHHHHHHHH
Q 021854 291 SDWKKCFSRL 300 (306)
Q Consensus 291 ~d~~~l~~~l 300 (306)
.++.+.+...
T Consensus 234 ~el~~~i~~~ 243 (324)
T TIGR03589 234 TDLAEAMAPE 243 (324)
T ss_pred HHHHHHHHhh
Confidence 8888887764
|
This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family. |
| >TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase | Back alignment and domain information |
|---|
Probab=99.83 E-value=7.5e-19 Score=160.38 Aligned_cols=187 Identities=15% Similarity=0.199 Sum_probs=138.1
Q ss_pred eEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCc--cEEEEcCCch----
Q 021854 101 AVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGV--RSIICPSEGF---- 174 (306)
Q Consensus 101 ~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~--d~vi~~~~g~---- 174 (306)
+|+||||||+||++++++|++.|++|++++|. .+|+.|.+.+.++++++ |+|||+++..
T Consensus 1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~---------------~~d~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~ 65 (287)
T TIGR01214 1 RILITGANGQLGRELVQQLSPEGRVVVALTSS---------------QLDLTDPEALERLLRAIRPDAVVNTAAYTDVDG 65 (287)
T ss_pred CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc---------------ccCCCCHHHHHHHHHhCCCCEEEECCccccccc
Confidence 58999999999999999999999999999885 47999999999999876 9999983310
Q ss_pred ------------------hhhcccccCCCEEEEecCcccccCCCC--c----ccccchHHHHHHHHHHHHHHhcCCCEEE
Q 021854 175 ------------------ISNAGSLKGVQHVILLSQLSVYRGSGG--I----QALMKGNARKLAEQDESMLMASGIPYTI 230 (306)
Q Consensus 175 ------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~--~----~~~~~~~a~~~~~~aE~~l~~sgi~~ti 230 (306)
+.+++.+.++ +||++||..+|.+..+ . .......+...|..+|.+++..++++++
T Consensus 66 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~~K~~~E~~~~~~~~~~~i 144 (287)
T TIGR01214 66 AESDPEKAFAVNALAPQNLARAAARHGA-RLVHISTDYVFDGEGKRPYREDDATNPLNVYGQSKLAGEQAIRAAGPNALI 144 (287)
T ss_pred cccCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEeeeeeecCCCCCCCCCCCCCCCcchhhHHHHHHHHHHHHhCCCeEE
Confidence 2234555565 8999999887753211 0 0001122344577789999888999999
Q ss_pred EEcCcccCCCC-------------CCcceeeecCCCCccccCHHHHHHHHHHHhhCCCCCCcEEEEecCC-cCHHHHHHH
Q 021854 231 IRTGVLQNTPG-------------GKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVVNGE-EKVSDWKKC 296 (306)
Q Consensus 231 iRPg~l~~~~~-------------~~~~~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~~~g~~~~v~~g~-~s~~d~~~l 296 (306)
+||+.+..... .+..+.. .++....+++++|+|+++..++..+...+++||++++. .++.|+.++
T Consensus 145 lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~v~Dva~a~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~ 223 (287)
T TIGR01214 145 VRTSWLYGGGGGRNFVRTMLRLAGRGEELRV-VDDQIGSPTYAKDLARVIAALLQRLARARGVYHLANSGQCSWYEFAQA 223 (287)
T ss_pred EEeeecccCCCCCCHHHHHHHHhhcCCCceE-ecCCCcCCcCHHHHHHHHHHHHhhccCCCCeEEEECCCCcCHHHHHHH
Confidence 99998653321 1111111 23444678999999999999998765567899999865 689999999
Q ss_pred HHHHhhhc
Q 021854 297 FSRLMEKT 304 (306)
Q Consensus 297 ~~~l~~~~ 304 (306)
+.+..++.
T Consensus 224 i~~~~~~~ 231 (287)
T TIGR01214 224 IFEEAGAD 231 (287)
T ss_pred HHHHhCcc
Confidence 98877653
|
This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc. |
| >PLN00198 anthocyanidin reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=8.6e-19 Score=164.16 Aligned_cols=203 Identities=13% Similarity=0.137 Sum_probs=137.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhh-----hcC--CCceeeeccCCCHHHHHHHhcCccEEEEc
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME-----SFG--TYVESMAGDASNKKFLKTALRGVRSIICP 170 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~-----~~~--~~v~~v~~D~~d~~~l~~~~~~~d~vi~~ 170 (306)
.+++||||||+|+||++++++|+++|++|++++|+.+.... ..+ .+++++.+|++|.+.+.++++++|+|||+
T Consensus 8 ~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~ 87 (338)
T PLN00198 8 GKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAHLRALQELGDLKIFGADLTDEESFEAPIAGCDLVFHV 87 (338)
T ss_pred CCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHhcCCCCceEEEEcCCCChHHHHHHHhcCCEEEEe
Confidence 46899999999999999999999999999999988754211 111 25788999999999999999999999998
Q ss_pred CCch---------------------hhhccccc-CCCEEEEecCcccccCCC----C--c------------ccc-cchH
Q 021854 171 SEGF---------------------ISNAGSLK-GVQHVILLSQLSVYRGSG----G--I------------QAL-MKGN 209 (306)
Q Consensus 171 ~~g~---------------------~~~~a~~~-gvkr~V~iSS~~~~~~~~----~--~------------~~~-~~~~ 209 (306)
++.. +.+++.+. ++++||++||.+++.... + . ... ....
T Consensus 88 A~~~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~~~~~~v~~SS~~~~g~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~ 167 (338)
T PLN00198 88 ATPVNFASEDPENDMIKPAIQGVHNVLKACAKAKSVKRVILTSSAAAVSINKLSGTGLVMNEKNWTDVEFLTSEKPPTWG 167 (338)
T ss_pred CCCCccCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeecceeeeccCCCCCCceeccccCCchhhhhhcCCccch
Confidence 4310 23334444 689999999988775211 0 0 000 0111
Q ss_pred HHHHHHHHHHHHH----hcCCCEEEEEcCcccCCCCC---------------Ccceee-e-cCC----CCccccCHHHHH
Q 021854 210 ARKLAEQDESMLM----ASGIPYTIIRTGVLQNTPGG---------------KQGFQF-E-EGC----AANGSLSKEDAA 264 (306)
Q Consensus 210 a~~~~~~aE~~l~----~sgi~~tiiRPg~l~~~~~~---------------~~~~~~-~-~g~----~~~~~Is~~DVA 264 (306)
+...|..+|.+++ +.+++++++||+.+...... +..+.. + .+. ....+++++|+|
T Consensus 168 Y~~sK~~~E~~~~~~~~~~~~~~~~~R~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~V~D~a 247 (338)
T PLN00198 168 YPASKTLAEKAAWKFAEENNIDLITVIPTLMAGPSLTSDIPSSLSLAMSLITGNEFLINGLKGMQMLSGSISITHVEDVC 247 (338)
T ss_pred hHHHHHHHHHHHHHHHHhcCceEEEEeCCceECCCccCCCCCcHHHHHHHHcCCccccccccccccccCCcceeEHHHHH
Confidence 2333555555443 46899999999985532110 001111 1 011 124789999999
Q ss_pred HHHHHHhhCCCCCCcEEEEecCCcCHHHHHHHHHHHh
Q 021854 265 FICVEALESIPQTGLIFEVVNGEEKVSDWKKCFSRLM 301 (306)
Q Consensus 265 ~~iv~aL~~~~~~g~~~~v~~g~~s~~d~~~l~~~l~ 301 (306)
++++.+++.+... ..|+.++.+.++.++.+++.+..
T Consensus 248 ~a~~~~~~~~~~~-~~~~~~~~~~s~~el~~~i~~~~ 283 (338)
T PLN00198 248 RAHIFLAEKESAS-GRYICCAANTSVPELAKFLIKRY 283 (338)
T ss_pred HHHHHHhhCcCcC-CcEEEecCCCCHHHHHHHHHHHC
Confidence 9999999875433 35755555568899988887665
|
|
| >TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.83 E-value=8.6e-19 Score=165.06 Aligned_cols=198 Identities=14% Similarity=0.086 Sum_probs=139.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh---c--CCCceeeeccCCCHHHHHHHhcC--ccEEEEc
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---F--GTYVESMAGDASNKKFLKTALRG--VRSIICP 170 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~---~--~~~v~~v~~D~~d~~~l~~~~~~--~d~vi~~ 170 (306)
++|+||||||+|+||+++++.|+++|++|++++|+....... . ..+++++.+|++|.+++.+++++ +|+|||+
T Consensus 3 ~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vih~ 82 (349)
T TIGR02622 3 QGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDAAKLRKAIAEFKPEIVFHL 82 (349)
T ss_pred CCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhhcCCceEEEccCCCHHHHHHHHhhcCCCEEEEC
Confidence 468999999999999999999999999999999987642211 1 23577899999999999999986 5999998
Q ss_pred CCch----------------------hhhcccccC-CCEEEEecCcccccCCC------------CcccccchHHHHHHH
Q 021854 171 SEGF----------------------ISNAGSLKG-VQHVILLSQLSVYRGSG------------GIQALMKGNARKLAE 215 (306)
Q Consensus 171 ~~g~----------------------~~~~a~~~g-vkr~V~iSS~~~~~~~~------------~~~~~~~~~a~~~~~ 215 (306)
++.. +.+++...+ +++||++||..+|.... +...|. ..|.
T Consensus 83 A~~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~~e~~~~~p~~~Y~-----~sK~ 157 (349)
T TIGR02622 83 AAQPLVRKSYADPLETFETNVMGTVNLLEAIRAIGSVKAVVNVTSDKCYRNDEWVWGYRETDPLGGHDPYS-----SSKA 157 (349)
T ss_pred CcccccccchhCHHHHHHHhHHHHHHHHHHHHhcCCCCEEEEEechhhhCCCCCCCCCccCCCCCCCCcch-----hHHH
Confidence 4310 234455555 78999999987764311 112232 2344
Q ss_pred HHHHHHHh-----------cCCCEEEEEcCcccCCCC---------------CCcceeeecCCCCccccCHHHHHHHHHH
Q 021854 216 QDESMLMA-----------SGIPYTIIRTGVLQNTPG---------------GKQGFQFEEGCAANGSLSKEDAAFICVE 269 (306)
Q Consensus 216 ~aE~~l~~-----------sgi~~tiiRPg~l~~~~~---------------~~~~~~~~~g~~~~~~Is~~DVA~~iv~ 269 (306)
.+|.+++. .+++++++||+.+..... .+..+.++.+.....+++++|+|++++.
T Consensus 158 ~~e~~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~rd~i~v~D~a~a~~~ 237 (349)
T TIGR02622 158 CAELVIASYRSSFFGVANFHGIKIASARAGNVIGGGDWAEDRLIPDVIRAFSSNKIVIIRNPDATRPWQHVLEPLSGYLL 237 (349)
T ss_pred HHHHHHHHHHHHhhcccccCCCcEEEEccCcccCCCcchhhhhhHHHHHHHhcCCCeEECCCCcccceeeHHHHHHHHHH
Confidence 44544432 289999999998653210 2233445556667889999999999998
Q ss_pred HhhCC----CCCCcEEEEecC---CcCHHHHHHHHHHH
Q 021854 270 ALESI----PQTGLIFEVVNG---EEKVSDWKKCFSRL 300 (306)
Q Consensus 270 aL~~~----~~~g~~~~v~~g---~~s~~d~~~l~~~l 300 (306)
+++.. ...+.+||++++ +.++.++.+.+.+.
T Consensus 238 ~~~~~~~~~~~~~~~yni~s~~~~~~s~~~~~~~i~~~ 275 (349)
T TIGR02622 238 LAEKLFTGQAEFAGAWNFGPRASDNARVVELVVDALEF 275 (349)
T ss_pred HHHHHhhcCccccceeeeCCCcccCcCHHHHHHHHHHH
Confidence 87642 123579999975 45778877755543
|
Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose. |
| >TIGR01472 gmd GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.82 E-value=8.8e-19 Score=164.51 Aligned_cols=202 Identities=12% Similarity=0.032 Sum_probs=140.8
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcch-----hhhhc-------CCCceeeeccCCCHHHHHHHhcC--cc
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-----AMESF-------GTYVESMAGDASNKKFLKTALRG--VR 165 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~-----~~~~~-------~~~v~~v~~D~~d~~~l~~~~~~--~d 165 (306)
|+||||||+||||++++++|+++|++|+++.|..+. ..... +.+++++.+|++|.+.+.+++++ +|
T Consensus 1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d 80 (343)
T TIGR01472 1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEIKPT 80 (343)
T ss_pred CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhCCCC
Confidence 589999999999999999999999999999997642 11111 23588999999999999999985 59
Q ss_pred EEEEcCCc------h----------------hhhcccccCCC---EEEEecCcccccCCCC--c---ccc-cchHHHHHH
Q 021854 166 SIICPSEG------F----------------ISNAGSLKGVQ---HVILLSQLSVYRGSGG--I---QAL-MKGNARKLA 214 (306)
Q Consensus 166 ~vi~~~~g------~----------------~~~~a~~~gvk---r~V~iSS~~~~~~~~~--~---~~~-~~~~a~~~~ 214 (306)
+|||+++- . +.+++.+.+++ +||++||..+|..... . ... ..+.+...|
T Consensus 81 ~ViH~Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK 160 (343)
T TIGR01472 81 EIYNLAAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTLGLIKSVKFYQASTSELYGKVQEIPQNETTPFYPRSPYAAAK 160 (343)
T ss_pred EEEECCcccccchhhhChHHHHHHHHHHHHHHHHHHHHhCCCcCeeEEEeccHHhhCCCCCCCCCCCCCCCCCChhHHHH
Confidence 99998431 0 34456666664 8999999988763211 0 001 011233345
Q ss_pred HHHHHHHH----hcCCCEEEEEcCc-ccCCCC----------------CCc--ceeeecCCCCccccCHHHHHHHHHHHh
Q 021854 215 EQDESMLM----ASGIPYTIIRTGV-LQNTPG----------------GKQ--GFQFEEGCAANGSLSKEDAAFICVEAL 271 (306)
Q Consensus 215 ~~aE~~l~----~sgi~~tiiRPg~-l~~~~~----------------~~~--~~~~~~g~~~~~~Is~~DVA~~iv~aL 271 (306)
..+|.+++ +.++++++.|+.. +..... .+. ...++.|+....+++++|+|++++.++
T Consensus 161 ~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~V~D~a~a~~~~~ 240 (343)
T TIGR01472 161 LYAHWITVNYREAYGLFAVNGILFNHESPRRGENFVTRKITRAAAKIKLGLQEKLYLGNLDAKRDWGHAKDYVEAMWLML 240 (343)
T ss_pred HHHHHHHHHHHHHhCCceEEEeecccCCCCCCccccchHHHHHHHHHHcCCCCceeeCCCccccCceeHHHHHHHHHHHH
Confidence 56666653 3578888777644 221110 111 122345666789999999999999998
Q ss_pred hCCCCCCcEEEEecCC-cCHHHHHHHHHHHhhh
Q 021854 272 ESIPQTGLIFEVVNGE-EKVSDWKKCFSRLMEK 303 (306)
Q Consensus 272 ~~~~~~g~~~~v~~g~-~s~~d~~~l~~~l~~~ 303 (306)
+.+. +.+||++++. .++.|+.+.+.++.++
T Consensus 241 ~~~~--~~~yni~~g~~~s~~e~~~~i~~~~g~ 271 (343)
T TIGR01472 241 QQDK--PDDYVIATGETHSVREFVEVSFEYIGK 271 (343)
T ss_pred hcCC--CccEEecCCCceeHHHHHHHHHHHcCC
Confidence 7653 3589999866 4899999999887764
|
Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116). |
| >PLN02896 cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.2e-18 Score=164.29 Aligned_cols=206 Identities=14% Similarity=0.135 Sum_probs=140.3
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh---c--CCCceeeeccCCCHHHHHHHhcCccEEEEc
Q 021854 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---F--GTYVESMAGDASNKKFLKTALRGVRSIICP 170 (306)
Q Consensus 96 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~---~--~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~ 170 (306)
+..+++||||||+|+||++++++|+++|++|++++|+.++.... + ..+++++.+|+.|.+.+.++++++|+|||+
T Consensus 7 ~~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~ 86 (353)
T PLN02896 7 ESATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQEEGSFDEAVKGCDGVFHV 86 (353)
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhccCCeEEEEECCCCCHHHHHHHHcCCCEEEEC
Confidence 34578999999999999999999999999999999987653221 1 246889999999999999999999999998
Q ss_pred CCc----h-------------------------hhhccccc-CCCEEEEecCcccccCCC--C-----c-----ccc---
Q 021854 171 SEG----F-------------------------ISNAGSLK-GVQHVILLSQLSVYRGSG--G-----I-----QAL--- 205 (306)
Q Consensus 171 ~~g----~-------------------------~~~~a~~~-gvkr~V~iSS~~~~~~~~--~-----~-----~~~--- 205 (306)
++. . +.+++.+. ++++||++||..+|.... + . .+.
T Consensus 87 A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~~~E~~~~p~~~~ 166 (353)
T PLN02896 87 AASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKTVKRVVFTSSISTLTAKDSNGRWRAVVDETCQTPIDHV 166 (353)
T ss_pred CccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcCCccEEEEEechhhccccccCCCCCCccCcccCCcHHHh
Confidence 321 0 12334445 488999999988875211 0 0 000
Q ss_pred ----cc-hHHHHHHHHHHHHH----HhcCCCEEEEEcCcccCCCCC---------------Ccceeeec--CCC----Cc
Q 021854 206 ----MK-GNARKLAEQDESML----MASGIPYTIIRTGVLQNTPGG---------------KQGFQFEE--GCA----AN 255 (306)
Q Consensus 206 ----~~-~~a~~~~~~aE~~l----~~sgi~~tiiRPg~l~~~~~~---------------~~~~~~~~--g~~----~~ 255 (306)
.+ +.+...|..+|.++ +..+++++++||+.+...... +....++. +.. ..
T Consensus 167 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 246 (353)
T PLN02896 167 WNTKASGWVYVLSKLLTEEAAFKYAKENGIDLVSVITTTVAGPFLTPSVPSSIQVLLSPITGDSKLFSILSAVNSRMGSI 246 (353)
T ss_pred hccCCCCccHHHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCcCCCCCchHHHHHHHhcCCccccccccccccccCce
Confidence 00 12333455556554 346899999999885432110 00000000 000 13
Q ss_pred cccCHHHHHHHHHHHhhCCCCCCcEEEEecCCcCHHHHHHHHHHHhh
Q 021854 256 GSLSKEDAAFICVEALESIPQTGLIFEVVNGEEKVSDWKKCFSRLME 302 (306)
Q Consensus 256 ~~Is~~DVA~~iv~aL~~~~~~g~~~~v~~g~~s~~d~~~l~~~l~~ 302 (306)
.+|+++|+|++++.+++.+... ..|++++.+.++.++.+++.+...
T Consensus 247 dfi~v~Dva~a~~~~l~~~~~~-~~~~~~~~~~s~~el~~~i~~~~~ 292 (353)
T PLN02896 247 ALVHIEDICDAHIFLMEQTKAE-GRYICCVDSYDMSELINHLSKEYP 292 (353)
T ss_pred eEEeHHHHHHHHHHHHhCCCcC-ccEEecCCCCCHHHHHHHHHHhCC
Confidence 6899999999999999865443 368766666789999999987664
|
|
| >PLN02686 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.82 E-value=8.5e-19 Score=166.56 Aligned_cols=208 Identities=14% Similarity=0.104 Sum_probs=141.0
Q ss_pred CccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh--c---------CCCceeeeccCCCHHHHHHHhcC
Q 021854 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES--F---------GTYVESMAGDASNKKFLKTALRG 163 (306)
Q Consensus 95 ~~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~--~---------~~~v~~v~~D~~d~~~l~~~~~~ 163 (306)
...++|+||||||+|+||++++++|+++|++|++++|+.+..... . ..++.++.+|++|.+.+.+++++
T Consensus 49 ~~~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i~~ 128 (367)
T PLN02686 49 ADAEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKLREMEMFGEMGRSNDGIWTVMANLTEPESLHEAFDG 128 (367)
T ss_pred cCCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhccccccCCceEEEEcCCCCHHHHHHHHHh
Confidence 344578999999999999999999999999999999986543211 1 12578899999999999999999
Q ss_pred ccEEEEcCC-----c---h--------------hhhccccc-CCCEEEEecCcc--cccC---CC-C--ccc--------
Q 021854 164 VRSIICPSE-----G---F--------------ISNAGSLK-GVQHVILLSQLS--VYRG---SG-G--IQA-------- 204 (306)
Q Consensus 164 ~d~vi~~~~-----g---~--------------~~~~a~~~-gvkr~V~iSS~~--~~~~---~~-~--~~~-------- 204 (306)
+|+|||+++ + . +.+++.+. +++|||++||.. +|.. .. + ...
T Consensus 129 ~d~V~hlA~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~~~v~r~V~~SS~~~~vyg~~~~~~~~~~i~E~~~~~~~~ 208 (367)
T PLN02686 129 CAGVFHTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRTESVRKCVFTSSLLACVWRQNYPHDLPPVIDEESWSDESF 208 (367)
T ss_pred ccEEEecCeeecccccccccchhhhhhHHHHHHHHHHHHhcCCccEEEEeccHHHhcccccCCCCCCcccCCCCCCChhh
Confidence 999998721 1 1 34556554 799999999964 3321 10 0 000
Q ss_pred -c-cchHHHHHHHHHHHHH----HhcCCCEEEEEcCcccCCCCC-C----------cceeeecCCCCccccCHHHHHHHH
Q 021854 205 -L-MKGNARKLAEQDESML----MASGIPYTIIRTGVLQNTPGG-K----------QGFQFEEGCAANGSLSKEDAAFIC 267 (306)
Q Consensus 205 -~-~~~~a~~~~~~aE~~l----~~sgi~~tiiRPg~l~~~~~~-~----------~~~~~~~g~~~~~~Is~~DVA~~i 267 (306)
. ....+...|..+|.++ ++.++++++|||+++...... . ..+.+ .++....+++++|+|+++
T Consensus 209 ~~~p~~~Y~~sK~~~E~~~~~~~~~~gl~~v~lRp~~vyGp~~~~~~~~~~~~~~~g~~~~-~g~g~~~~v~V~Dva~A~ 287 (367)
T PLN02686 209 CRDNKLWYALGKLKAEKAAWRAARGKGLKLATICPALVTGPGFFRRNSTATIAYLKGAQEM-LADGLLATADVERLAEAH 287 (367)
T ss_pred cccccchHHHHHHHHHHHHHHHHHhcCceEEEEcCCceECCCCCCCCChhHHHHhcCCCcc-CCCCCcCeEEHHHHHHHH
Confidence 0 0011233355556554 346999999999985532110 0 01111 233334689999999999
Q ss_pred HHHhhCC--CCCCcEEEEecCCcCHHHHHHHHHHHhhh
Q 021854 268 VEALESI--PQTGLIFEVVNGEEKVSDWKKCFSRLMEK 303 (306)
Q Consensus 268 v~aL~~~--~~~g~~~~v~~g~~s~~d~~~l~~~l~~~ 303 (306)
+.+++.+ ...+.+|...+.+.++.++.+++.++.+.
T Consensus 288 ~~al~~~~~~~~~~~yi~~g~~~s~~e~~~~i~~~~g~ 325 (367)
T PLN02686 288 VCVYEAMGNKTAFGRYICFDHVVSREDEAEELARQIGL 325 (367)
T ss_pred HHHHhccCCCCCCCcEEEeCCCccHHHHHHHHHHHcCC
Confidence 9999853 23456784443456899999999988764
|
|
| >PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.8e-19 Score=159.08 Aligned_cols=183 Identities=22% Similarity=0.243 Sum_probs=136.9
Q ss_pred EEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh-cCCCceeeeccCCCHHHHHHHhcCc--cEEEEcCCch----
Q 021854 102 VLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-FGTYVESMAGDASNKKFLKTALRGV--RSIICPSEGF---- 174 (306)
Q Consensus 102 ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~-~~~~v~~v~~D~~d~~~l~~~~~~~--d~vi~~~~g~---- 174 (306)
||||||||+||++++++|+++|+.|+.+.|........ ...+++++.+|+.|.+.+.+++++. |+|||+++..
T Consensus 1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~~~~~~~~d~vi~~a~~~~~~~ 80 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKKLNVEFVIGDLTDKEQLEKLLEKANIDVVIHLAAFSSNPE 80 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHHTTEEEEESETTSHHHHHHHHHHHTESEEEEEBSSSSHHH
T ss_pred EEEEccCCHHHHHHHHHHHHcCCccccccccccccccccccceEEEEEeeccccccccccccccCceEEEEeeccccccc
Confidence 79999999999999999999999999999988764221 1127899999999999999999877 9999983310
Q ss_pred ------------------hhhcccccCCCEEEEecCcccccCCCCcc-----cc-cchHHHHHHHHHHHHHH----hcCC
Q 021854 175 ------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQ-----AL-MKGNARKLAEQDESMLM----ASGI 226 (306)
Q Consensus 175 ------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~~-----~~-~~~~a~~~~~~aE~~l~----~sgi 226 (306)
+.+++.+.++++||++||..+|....... .. ..+.+...|..+|.+++ ..++
T Consensus 81 ~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~sS~~~y~~~~~~~~~e~~~~~~~~~Y~~~K~~~e~~~~~~~~~~~~ 160 (236)
T PF01370_consen 81 SFEDPEEIIEANVQGTRNLLEAAREAGVKRFIFLSSASVYGDPDGEPIDEDSPINPLSPYGASKRAAEELLRDYAKKYGL 160 (236)
T ss_dssp HHHSHHHHHHHHHHHHHHHHHHHHHHTTSEEEEEEEGGGGTSSSSSSBETTSGCCHSSHHHHHHHHHHHHHHHHHHHHTS
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 44567788999999999998886542211 00 01123334555555554 4599
Q ss_pred CEEEEEcCcccCCC----C-------------CCcce-eeecCCCCccccCHHHHHHHHHHHhhCCCCCCcEEEEe
Q 021854 227 PYTIIRTGVLQNTP----G-------------GKQGF-QFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVV 284 (306)
Q Consensus 227 ~~tiiRPg~l~~~~----~-------------~~~~~-~~~~g~~~~~~Is~~DVA~~iv~aL~~~~~~g~~~~v~ 284 (306)
+++++||+.+.... . .+..+ .++.++....+++++|+|++++.+++++...+++|||+
T Consensus 161 ~~~~~R~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~yNig 236 (236)
T PF01370_consen 161 RVTILRPPNVYGPGNPNNNSSSFLPSLIRQALKGKPIKIPGDGSQVRDFIHVDDLAEAIVAALENPKAAGGIYNIG 236 (236)
T ss_dssp EEEEEEESEEESTTSSSSSTSSHHHHHHHHHHTTSSEEEESTSSCEEEEEEHHHHHHHHHHHHHHSCTTTEEEEES
T ss_pred ccccccccccccccccccccccccchhhHHhhcCCcccccCCCCCccceEEHHHHHHHHHHHHhCCCCCCCEEEeC
Confidence 99999999855333 1 12222 33566777899999999999999999988778999985
|
The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B .... |
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=8.9e-19 Score=177.76 Aligned_cols=204 Identities=13% Similarity=0.187 Sum_probs=144.7
Q ss_pred CeEEEEcCCChHHHHHHHHHH--HCCCeEEEEecCcch--hhhh---cC-CCceeeeccCCCH------HHHHHHhcCcc
Q 021854 100 DAVLVTDGDSDIGQMVILSLI--VKRTRIKALVKDKRN--AMES---FG-TYVESMAGDASNK------KFLKTALRGVR 165 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~--~~g~~V~~l~R~~~~--~~~~---~~-~~v~~v~~D~~d~------~~l~~~~~~~d 165 (306)
|+||||||||+||++++++|+ ..|++|++++|+... .... .+ .+++++.+|+.|+ +.++.+ +++|
T Consensus 1 m~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l-~~~D 79 (657)
T PRK07201 1 MRYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSLSRLEALAAYWGADRVVPLVGDLTEPGLGLSEADIAEL-GDID 79 (657)
T ss_pred CeEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchHHHHHHHHHhcCCCcEEEEecccCCccCCcCHHHHHHh-cCCC
Confidence 589999999999999999999 589999999997543 1111 12 4689999999983 455555 8999
Q ss_pred EEEEcCCc-------------------hhhhcccccCCCEEEEecCcccccCCCCc--------ccccchHHHHHHHHHH
Q 021854 166 SIICPSEG-------------------FISNAGSLKGVQHVILLSQLSVYRGSGGI--------QALMKGNARKLAEQDE 218 (306)
Q Consensus 166 ~vi~~~~g-------------------~~~~~a~~~gvkr~V~iSS~~~~~~~~~~--------~~~~~~~a~~~~~~aE 218 (306)
+|||+++. .+.+++++.++++||++||..++...... .......+...|..+|
T Consensus 80 ~Vih~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~~SS~~v~g~~~~~~~e~~~~~~~~~~~~Y~~sK~~~E 159 (657)
T PRK07201 80 HVVHLAAIYDLTADEEAQRAANVDGTRNVVELAERLQAATFHHVSSIAVAGDYEGVFREDDFDEGQGLPTPYHRTKFEAE 159 (657)
T ss_pred EEEECceeecCCCCHHHHHHHHhHHHHHHHHHHHhcCCCeEEEEeccccccCccCccccccchhhcCCCCchHHHHHHHH
Confidence 99998431 14456777889999999999886432110 0000112445577888
Q ss_pred HHHH-hcCCCEEEEEcCcccCCCCCCc--------------------c--e-eeecCCCCccccCHHHHHHHHHHHhhCC
Q 021854 219 SMLM-ASGIPYTIIRTGVLQNTPGGKQ--------------------G--F-QFEEGCAANGSLSKEDAAFICVEALESI 274 (306)
Q Consensus 219 ~~l~-~sgi~~tiiRPg~l~~~~~~~~--------------------~--~-~~~~g~~~~~~Is~~DVA~~iv~aL~~~ 274 (306)
.+++ ..+++++++||+.+......+. . . .+..+.....+++++|+|+++..++..+
T Consensus 160 ~~~~~~~g~~~~ilRp~~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~vddva~ai~~~~~~~ 239 (657)
T PRK07201 160 KLVREECGLPWRVYRPAVVVGDSRTGEMDKIDGPYYFFKVLAKLAKLPSWLPMVGPDGGRTNIVPVDYVADALDHLMHKD 239 (657)
T ss_pred HHHHHcCCCcEEEEcCCeeeecCCCCccccCCcHHHHHHHHHHhccCCcccccccCCCCeeeeeeHHHHHHHHHHHhcCc
Confidence 8887 4789999999998653211100 0 0 0112223357899999999999998876
Q ss_pred CCCCcEEEEecCC-cCHHHHHHHHHHHhhhc
Q 021854 275 PQTGLIFEVVNGE-EKVSDWKKCFSRLMEKT 304 (306)
Q Consensus 275 ~~~g~~~~v~~g~-~s~~d~~~l~~~l~~~~ 304 (306)
...+++|++++++ .++.++.+.+.+..+.+
T Consensus 240 ~~~g~~~ni~~~~~~s~~el~~~i~~~~g~~ 270 (657)
T PRK07201 240 GRDGQTFHLTDPKPQRVGDIYNAFARAAGAP 270 (657)
T ss_pred CCCCCEEEeCCCCCCcHHHHHHHHHHHhCCC
Confidence 6778999999865 58889888888876543
|
|
| >PRK05865 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=1e-18 Score=179.45 Aligned_cols=179 Identities=13% Similarity=0.148 Sum_probs=139.6
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcCCc------
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG------ 173 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~g------ 173 (306)
|+|+||||+|+||++++++|+++|++|++++|+.... ...+++++.+|+.|.+.+.++++++|+|||+++.
T Consensus 1 MkILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~---~~~~v~~v~gDL~D~~~l~~al~~vD~VVHlAa~~~~~~~ 77 (854)
T PRK05865 1 MRIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDS---WPSSADFIAADIRDATAVESAMTGADVVAHCAWVRGRNDH 77 (854)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchhh---cccCceEEEeeCCCHHHHHHHHhCCCEEEECCCcccchHH
Confidence 5799999999999999999999999999999975432 2346889999999999999999999999998431
Q ss_pred -------hhhhcccccCCCEEEEecCcccccCCCCcccccchHHHHHHHHHHHHHHhcCCCEEEEEcCcccCCC-C----
Q 021854 174 -------FISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMASGIPYTIIRTGVLQNTP-G---- 241 (306)
Q Consensus 174 -------~~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~~~~~aE~~l~~sgi~~tiiRPg~l~~~~-~---- 241 (306)
.+.+++.+.++++||++||.. |..+|.++++.+++++++||+++.... .
T Consensus 78 vNv~GT~nLLeAa~~~gvkr~V~iSS~~-------------------K~aaE~ll~~~gl~~vILRp~~VYGP~~~~~i~ 138 (854)
T PRK05865 78 INIDGTANVLKAMAETGTGRIVFTSSGH-------------------QPRVEQMLADCGLEWVAVRCALIFGRNVDNWVQ 138 (854)
T ss_pred HHHHHHHHHHHHHHHcCCCeEEEECCcH-------------------HHHHHHHHHHcCCCEEEEEeceEeCCChHHHHH
Confidence 145667788999999999863 446788888899999999999865321 1
Q ss_pred C-CcceeeecCC--CCccccCHHHHHHHHHHHhhCCCCCCcEEEEecCC-cCHHHHHHHHHHH
Q 021854 242 G-KQGFQFEEGC--AANGSLSKEDAAFICVEALESIPQTGLIFEVVNGE-EKVSDWKKCFSRL 300 (306)
Q Consensus 242 ~-~~~~~~~~g~--~~~~~Is~~DVA~~iv~aL~~~~~~g~~~~v~~g~-~s~~d~~~l~~~l 300 (306)
. .....+..|. ....+++++|+|+++..+++.+...+.+||++++. .++.++.+.+...
T Consensus 139 ~ll~~~v~~~G~~~~~~dfIhVdDVA~Ai~~aL~~~~~~ggvyNIgsg~~~Si~EIae~l~~~ 201 (854)
T PRK05865 139 RLFALPVLPAGYADRVVQVVHSDDAQRLLVRALLDTVIDSGPVNLAAPGELTFRRIAAALGRP 201 (854)
T ss_pred HHhcCceeccCCCCceEeeeeHHHHHHHHHHHHhCCCcCCCeEEEECCCcccHHHHHHHHhhh
Confidence 0 0111122232 23578999999999999987655556799999876 5888988887753
|
|
| >TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.81 E-value=3e-18 Score=157.73 Aligned_cols=202 Identities=15% Similarity=0.133 Sum_probs=139.1
Q ss_pred eEEEEcCCChHHHHHHHHHHHCC--CeEEEEecCcc-----hhhhhc-CCCceeeeccCCCHHHHHHHhcC--ccEEEEc
Q 021854 101 AVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKR-----NAMESF-GTYVESMAGDASNKKFLKTALRG--VRSIICP 170 (306)
Q Consensus 101 ~ilVtGatG~iG~~l~~~L~~~g--~~V~~l~R~~~-----~~~~~~-~~~v~~v~~D~~d~~~l~~~~~~--~d~vi~~ 170 (306)
+|+||||||+||++++++|++.| ++|+++.|... ...... ..+++++.+|++|++++.+++++ +|+|||+
T Consensus 1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~~ 80 (317)
T TIGR01181 1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLEDNPRYRFVKGDIGDRELVSRLFTEHQPDAVVHF 80 (317)
T ss_pred CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhccCCCcEEEEcCCcCHHHHHHHHhhcCCCEEEEc
Confidence 58999999999999999999987 78988876421 111111 13688899999999999999998 8999998
Q ss_pred CCch----------------------hhhcccccCCC-EEEEecCcccccCCCCcc------cccc-hHHHHHHHHHHHH
Q 021854 171 SEGF----------------------ISNAGSLKGVQ-HVILLSQLSVYRGSGGIQ------ALMK-GNARKLAEQDESM 220 (306)
Q Consensus 171 ~~g~----------------------~~~~a~~~gvk-r~V~iSS~~~~~~~~~~~------~~~~-~~a~~~~~~aE~~ 220 (306)
++.. +.+++.+.+.+ ++|++||..++....... ...+ ..+...|..+|.+
T Consensus 81 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~v~g~~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~ 160 (317)
T TIGR01181 81 AAESHVDRSISGPAAFIETNVVGTYTLLEAVRKYWHEFRFHHISTDEVYGDLEKGDAFTETTPLAPSSPYSASKAASDHL 160 (317)
T ss_pred ccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCceEEEeeccceeCCCCCCCCcCCCCCCCCCCchHHHHHHHHHH
Confidence 4311 23445555443 899999987765321100 0000 1123334455555
Q ss_pred HH----hcCCCEEEEEcCcccCCCC--------------CCcce-eeecCCCCccccCHHHHHHHHHHHhhCCCCCCcEE
Q 021854 221 LM----ASGIPYTIIRTGVLQNTPG--------------GKQGF-QFEEGCAANGSLSKEDAAFICVEALESIPQTGLIF 281 (306)
Q Consensus 221 l~----~sgi~~tiiRPg~l~~~~~--------------~~~~~-~~~~g~~~~~~Is~~DVA~~iv~aL~~~~~~g~~~ 281 (306)
++ +.+++++++||+.+..... .+..+ .++.++....+++++|+|+++..++++. ..+++|
T Consensus 161 ~~~~~~~~~~~~~i~R~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~~~~~~~~~~-~~~~~~ 239 (317)
T TIGR01181 161 VRAYHRTYGLPALITRCSNNYGPYQFPEKLIPLMITNALAGKPLPVYGDGQQVRDWLYVEDHCRAIYLVLEKG-RVGETY 239 (317)
T ss_pred HHHHHHHhCCCeEEEEeccccCCCCCcccHHHHHHHHHhcCCCceEeCCCceEEeeEEHHHHHHHHHHHHcCC-CCCceE
Confidence 43 5689999999998543211 11122 2344555678999999999999999754 456899
Q ss_pred EEecCC-cCHHHHHHHHHHHhhh
Q 021854 282 EVVNGE-EKVSDWKKCFSRLMEK 303 (306)
Q Consensus 282 ~v~~g~-~s~~d~~~l~~~l~~~ 303 (306)
++++++ .++.|+.+++.++.+.
T Consensus 240 ~~~~~~~~s~~~~~~~i~~~~~~ 262 (317)
T TIGR01181 240 NIGGGNERTNLEVVETILELLGK 262 (317)
T ss_pred EeCCCCceeHHHHHHHHHHHhCC
Confidence 999875 5899999999888764
|
This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor. |
| >COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.81 E-value=2.4e-18 Score=158.30 Aligned_cols=201 Identities=19% Similarity=0.250 Sum_probs=144.8
Q ss_pred eEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCc-cEEEEcCC------c
Q 021854 101 AVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGV-RSIICPSE------G 173 (306)
Q Consensus 101 ~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~-d~vi~~~~------g 173 (306)
.|||||||||||++++++|+++|++|+++.|...+..... .+++++.+|++|.+.+..+++++ |+|||+++ .
T Consensus 2 ~ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~~~d~vih~aa~~~~~~~ 80 (314)
T COG0451 2 RILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL-SGVEFVVLDLTDRDLVDELAKGVPDAVIHLAAQSSVPDS 80 (314)
T ss_pred eEEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCccccccc-cccceeeecccchHHHHHHHhcCCCEEEEccccCchhhh
Confidence 4999999999999999999999999999999887644333 56889999999998888899988 99999832 1
Q ss_pred -------h----------hhhcccccCCCEEEEecCcccccCC-CC--c-c---cccch-HHHHHHHHHHHHHHh----c
Q 021854 174 -------F----------ISNAGSLKGVQHVILLSQLSVYRGS-GG--I-Q---ALMKG-NARKLAEQDESMLMA----S 224 (306)
Q Consensus 174 -------~----------~~~~a~~~gvkr~V~iSS~~~~~~~-~~--~-~---~~~~~-~a~~~~~~aE~~l~~----s 224 (306)
+ +.+++++.++++|||.||.+++... .. . . ...+. .+...|..+|.+++. .
T Consensus 81 ~~~~~~~~~~~nv~gt~~ll~aa~~~~~~~~v~~ss~~~~~~~~~~~~~~E~~~~~~p~~~Yg~sK~~~E~~~~~~~~~~ 160 (314)
T COG0451 81 NASDPAEFLDVNVDGTLNLLEAARAAGVKRFVFASSVSVVYGDPPPLPIDEDLGPPRPLNPYGVSKLAAEQLLRAYARLY 160 (314)
T ss_pred hhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCCCceECCCCCCCCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 1 3445667899999998887765532 00 0 0 01111 234456677777764 4
Q ss_pred CCCEEEEEcCcccCCCCC-----------------Ccc-eee-ecCCCCccccCHHHHHHHHHHHhhCCCCCCcEEEEec
Q 021854 225 GIPYTIIRTGVLQNTPGG-----------------KQG-FQF-EEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVVN 285 (306)
Q Consensus 225 gi~~tiiRPg~l~~~~~~-----------------~~~-~~~-~~g~~~~~~Is~~DVA~~iv~aL~~~~~~g~~~~v~~ 285 (306)
+++++++||+.+...... +.. ..+ ..+.....+++++|+|++++.+++++... .|++++
T Consensus 161 ~~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~--~~ni~~ 238 (314)
T COG0451 161 GLPVVILRPFNVYGPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVDDVADALLLALENPDGG--VFNIGS 238 (314)
T ss_pred CCCeEEEeeeeeeCCCCCCCCCcCcHHHHHHHHHhCCCcceEeCCCceeEeeEeHHHHHHHHHHHHhCCCCc--EEEeCC
Confidence 699999999875422111 111 111 12233346899999999999999987655 999999
Q ss_pred CC--cCHHHHHHHHHHHhhhc
Q 021854 286 GE--EKVSDWKKCFSRLMEKT 304 (306)
Q Consensus 286 g~--~s~~d~~~l~~~l~~~~ 304 (306)
+. .++.++.+.+.+..+..
T Consensus 239 ~~~~~~~~e~~~~~~~~~~~~ 259 (314)
T COG0451 239 GTAEITVRELAEAVAEAVGSK 259 (314)
T ss_pred CCCcEEHHHHHHHHHHHhCCC
Confidence 74 58899999988877653
|
|
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=99.81 E-value=2.6e-18 Score=175.08 Aligned_cols=204 Identities=19% Similarity=0.206 Sum_probs=144.0
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHC--CCeEEEEecCc--chhhhh----cCCCceeeeccCCCHHHHHHHh--cCccEEE
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVK--RTRIKALVKDK--RNAMES----FGTYVESMAGDASNKKFLKTAL--RGVRSII 168 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~--g~~V~~l~R~~--~~~~~~----~~~~v~~v~~D~~d~~~l~~~~--~~~d~vi 168 (306)
.|+||||||||+||++++++|+++ +++|+++.|.. +..... ...+++++.+|+.|.+.+..++ .++|+||
T Consensus 6 ~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~D~Vi 85 (668)
T PLN02260 6 PKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNPSKSSPNFKFVKGDIASADLVNYLLITEGIDTIM 85 (668)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhhhhhcccCCCeEEEECCCCChHHHHHHHhhcCCCEEE
Confidence 589999999999999999999998 68999888753 111111 1247899999999998888766 5799999
Q ss_pred EcCCch----------------------hhhcccccC-CCEEEEecCcccccCCCCcc--------cc-cchHHHHHHHH
Q 021854 169 CPSEGF----------------------ISNAGSLKG-VQHVILLSQLSVYRGSGGIQ--------AL-MKGNARKLAEQ 216 (306)
Q Consensus 169 ~~~~g~----------------------~~~~a~~~g-vkr~V~iSS~~~~~~~~~~~--------~~-~~~~a~~~~~~ 216 (306)
|+++.. +.+++++.+ +++||++||..+|....... .. ....+...|..
T Consensus 86 HlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~vkr~I~~SS~~vyg~~~~~~~~~~~E~~~~~p~~~Y~~sK~~ 165 (668)
T PLN02260 86 HFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDADVGNHEASQLLPTNPYSATKAG 165 (668)
T ss_pred ECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcchHHhCCCccccccCccccCCCCCCCCcHHHHHH
Confidence 984310 345566666 89999999998875322110 00 01123344666
Q ss_pred HHHHHH----hcCCCEEEEEcCcccCCCC--------------CCccee-eecCCCCccccCHHHHHHHHHHHhhCCCCC
Q 021854 217 DESMLM----ASGIPYTIIRTGVLQNTPG--------------GKQGFQ-FEEGCAANGSLSKEDAAFICVEALESIPQT 277 (306)
Q Consensus 217 aE~~l~----~sgi~~tiiRPg~l~~~~~--------------~~~~~~-~~~g~~~~~~Is~~DVA~~iv~aL~~~~~~ 277 (306)
+|.+++ +.+++++++||+.+..... .+..+. ++.+.....+++++|+|+++..+++... .
T Consensus 166 aE~~v~~~~~~~~l~~vilR~~~VyGp~~~~~~~i~~~~~~a~~g~~i~i~g~g~~~r~~ihV~Dva~a~~~~l~~~~-~ 244 (668)
T PLN02260 166 AEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMQGKPLPIHGDGSNVRSYLYCEDVAEAFEVVLHKGE-V 244 (668)
T ss_pred HHHHHHHHHHHcCCCEEEECcccccCcCCCcccHHHHHHHHHhCCCCeEEecCCCceEeeEEHHHHHHHHHHHHhcCC-C
Confidence 777665 3689999999998653221 112222 2345555789999999999999887543 4
Q ss_pred CcEEEEecCC-cCHHHHHHHHHHHhhh
Q 021854 278 GLIFEVVNGE-EKVSDWKKCFSRLMEK 303 (306)
Q Consensus 278 g~~~~v~~g~-~s~~d~~~l~~~l~~~ 303 (306)
+.+|++++++ .++.++.+.+.++.+.
T Consensus 245 ~~vyni~~~~~~s~~el~~~i~~~~g~ 271 (668)
T PLN02260 245 GHVYNIGTKKERRVIDVAKDICKLFGL 271 (668)
T ss_pred CCEEEECCCCeeEHHHHHHHHHHHhCC
Confidence 6799999865 5899999988887654
|
|
| >PRK10675 UDP-galactose-4-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=5.7e-18 Score=158.20 Aligned_cols=204 Identities=21% Similarity=0.203 Sum_probs=138.8
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhh-------hhcCCCceeeeccCCCHHHHHHHhc--CccEEEEc
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM-------ESFGTYVESMAGDASNKKFLKTALR--GVRSIICP 170 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~-------~~~~~~v~~v~~D~~d~~~l~~~~~--~~d~vi~~ 170 (306)
|+|+||||+|+||++++++|+++|++|+++.|..+... ...+.++.++.+|+.|.+.+.++++ ++|+|||+
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vvh~ 80 (338)
T PRK10675 1 MRVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALLTEILHDHAIDTVIHF 80 (338)
T ss_pred CeEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHhcCCCceEEEccCCCHHHHHHHHhcCCCCEEEEC
Confidence 57999999999999999999999999999876533211 1112356788999999999999886 58999998
Q ss_pred CCc----------------------hhhhcccccCCCEEEEecCcccccCCCC--c---cc--ccchHHHHHHHHHHHHH
Q 021854 171 SEG----------------------FISNAGSLKGVQHVILLSQLSVYRGSGG--I---QA--LMKGNARKLAEQDESML 221 (306)
Q Consensus 171 ~~g----------------------~~~~~a~~~gvkr~V~iSS~~~~~~~~~--~---~~--~~~~~a~~~~~~aE~~l 221 (306)
++. .+.+++++.++++||++||..+|..... . .. .....+...|..+|.++
T Consensus 81 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~yg~~~~~~~~E~~~~~~p~~~Y~~sK~~~E~~~ 160 (338)
T PRK10675 81 AGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNLIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQIL 160 (338)
T ss_pred CccccccchhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhhCCCCCCccccccCCCCCCChhHHHHHHHHHHH
Confidence 321 0345566789999999999887642211 0 00 00112333455666666
Q ss_pred Hh-----cCCCEEEEEcCcccCC---------CC---------------CCcc-e-ee------ecCCCCccccCHHHHH
Q 021854 222 MA-----SGIPYTIIRTGVLQNT---------PG---------------GKQG-F-QF------EEGCAANGSLSKEDAA 264 (306)
Q Consensus 222 ~~-----sgi~~tiiRPg~l~~~---------~~---------------~~~~-~-~~------~~g~~~~~~Is~~DVA 264 (306)
++ .+++++++|++.+... .. .... + .+ ..|.....+++++|+|
T Consensus 161 ~~~~~~~~~~~~~ilR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~D~a 240 (338)
T PRK10675 161 TDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMDLA 240 (338)
T ss_pred HHHHHhcCCCcEEEEEeeeecCCCcccccccCCCCChhHHHHHHHHHHhcCCCceEEeCCcCCCCCCcEEEeeEEHHHHH
Confidence 53 3789999997543211 00 0010 1 11 1233446789999999
Q ss_pred HHHHHHhhCC--CCCCcEEEEecCC-cCHHHHHHHHHHHhhh
Q 021854 265 FICVEALESI--PQTGLIFEVVNGE-EKVSDWKKCFSRLMEK 303 (306)
Q Consensus 265 ~~iv~aL~~~--~~~g~~~~v~~g~-~s~~d~~~l~~~l~~~ 303 (306)
++++.+++.. ...+++|++++++ .++.|+.+++.+..++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~ 282 (338)
T PRK10675 241 DGHVAAMEKLANKPGVHIYNLGAGVGSSVLDVVNAFSKACGK 282 (338)
T ss_pred HHHHHHHHhhhccCCCceEEecCCCceeHHHHHHHHHHHhCC
Confidence 9999999752 2345799999876 5899999999888764
|
|
| >PLN02166 dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.80 E-value=3.7e-18 Score=165.57 Aligned_cols=198 Identities=16% Similarity=0.115 Sum_probs=137.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcch----hhhhcC-CCceeeeccCCCHHHHHHHhcCccEEEEcCC
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN----AMESFG-TYVESMAGDASNKKFLKTALRGVRSIICPSE 172 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~----~~~~~~-~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~ 172 (306)
..|+|+||||+||||++|+++|+++|++|+++.|.... ...... .+++++.+|+.+. .+.++|+|||+++
T Consensus 119 ~~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~~~~~~~~~~~~~~~~~Di~~~-----~~~~~D~ViHlAa 193 (436)
T PLN02166 119 KRLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVHLFGNPRFELIRHDVVEP-----ILLEVDQIYHLAC 193 (436)
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHhHhhhhccCCceEEEECccccc-----cccCCCEEEECce
Confidence 45899999999999999999999999999999885422 111111 3577888888764 3568999999842
Q ss_pred --c--------------------hhhhcccccCCCEEEEecCcccccCCCCc----------ccccc-hHHHHHHHHHHH
Q 021854 173 --G--------------------FISNAGSLKGVQHVILLSQLSVYRGSGGI----------QALMK-GNARKLAEQDES 219 (306)
Q Consensus 173 --g--------------------~~~~~a~~~gvkr~V~iSS~~~~~~~~~~----------~~~~~-~~a~~~~~~aE~ 219 (306)
. .+.++|++.++ +||++||..+|...... .+..+ ..+...|..+|.
T Consensus 194 ~~~~~~~~~~p~~~~~~Nv~gT~nLleaa~~~g~-r~V~~SS~~VYg~~~~~p~~E~~~~~~~p~~p~s~Yg~SK~~aE~ 272 (436)
T PLN02166 194 PASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAET 272 (436)
T ss_pred eccchhhccCHHHHHHHHHHHHHHHHHHHHHhCC-EEEEECcHHHhCCCCCCCCCccccccCCCCCCCCchHHHHHHHHH
Confidence 1 04456777775 89999999888632110 01100 112334555666
Q ss_pred HHH----hcCCCEEEEEcCcccCCC-C---------------CCcce-eeecCCCCccccCHHHHHHHHHHHhhCCCCCC
Q 021854 220 MLM----ASGIPYTIIRTGVLQNTP-G---------------GKQGF-QFEEGCAANGSLSKEDAAFICVEALESIPQTG 278 (306)
Q Consensus 220 ~l~----~sgi~~tiiRPg~l~~~~-~---------------~~~~~-~~~~g~~~~~~Is~~DVA~~iv~aL~~~~~~g 278 (306)
+++ ..+++++++||+.+.... . .+..+ .++.+.....+++++|+|+++..+++... +
T Consensus 273 ~~~~y~~~~~l~~~ilR~~~vYGp~~~~~~~~~i~~~i~~~l~~~~i~v~g~g~~~rdfi~V~Dva~ai~~~~~~~~--~ 350 (436)
T PLN02166 273 LAMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQTIRKQPMTVYGDGKQTRSFQYVSDLVDGLVALMEGEH--V 350 (436)
T ss_pred HHHHHHHHhCCCeEEEEEccccCCCCCCCccchHHHHHHHHhcCCCcEEeCCCCeEEeeEEHHHHHHHHHHHHhcCC--C
Confidence 554 468999999998754321 0 11222 23445556789999999999999987543 4
Q ss_pred cEEEEecCC-cCHHHHHHHHHHHhhh
Q 021854 279 LIFEVVNGE-EKVSDWKKCFSRLMEK 303 (306)
Q Consensus 279 ~~~~v~~g~-~s~~d~~~l~~~l~~~ 303 (306)
.+||+++++ .++.|+.+.+.++.+.
T Consensus 351 giyNIgs~~~~Si~ela~~I~~~~g~ 376 (436)
T PLN02166 351 GPFNLGNPGEFTMLELAEVVKETIDS 376 (436)
T ss_pred ceEEeCCCCcEeHHHHHHHHHHHhCC
Confidence 599999865 5899999999988764
|
|
| >PLN02240 UDP-glucose 4-epimerase | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.1e-17 Score=157.19 Aligned_cols=207 Identities=15% Similarity=0.169 Sum_probs=142.0
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchh-------hhh---cCCCceeeeccCCCHHHHHHHhc--Cc
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-------MES---FGTYVESMAGDASNKKFLKTALR--GV 164 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~-------~~~---~~~~v~~v~~D~~d~~~l~~~~~--~~ 164 (306)
.++++|+||||+|+||++++++|+++|++|++++|..... ... .+.+++++.+|+.|.+.+..+++ ++
T Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~~ 82 (352)
T PLN02240 3 LMGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFASTRF 82 (352)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHhCCC
Confidence 3568999999999999999999999999999998754221 111 12468899999999999999886 57
Q ss_pred cEEEEcCCc----------------------hhhhcccccCCCEEEEecCcccccCCCCc-----cccc-chHHHHHHHH
Q 021854 165 RSIICPSEG----------------------FISNAGSLKGVQHVILLSQLSVYRGSGGI-----QALM-KGNARKLAEQ 216 (306)
Q Consensus 165 d~vi~~~~g----------------------~~~~~a~~~gvkr~V~iSS~~~~~~~~~~-----~~~~-~~~a~~~~~~ 216 (306)
|+|||+++. .+.+++.+.++++||++||..+|...... .... ...+...|..
T Consensus 83 d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~ 162 (352)
T PLN02240 83 DAVIHFAGLKAVGESVAKPLLYYDNNLVGTINLLEVMAKHGCKKLVFSSSATVYGQPEEVPCTEEFPLSATNPYGRTKLF 162 (352)
T ss_pred CEEEEccccCCccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHhCCCCCCCCCCCCCCCCCCHHHHHHHH
Confidence 999998431 13455667889999999998776432110 0000 1123334566
Q ss_pred HHHHHHh-----cCCCEEEEEcCcccCC---------CCC--------------Cc--ceee-------ecCCCCccccC
Q 021854 217 DESMLMA-----SGIPYTIIRTGVLQNT---------PGG--------------KQ--GFQF-------EEGCAANGSLS 259 (306)
Q Consensus 217 aE~~l~~-----sgi~~tiiRPg~l~~~---------~~~--------------~~--~~~~-------~~g~~~~~~Is 259 (306)
+|.+++. .+++++++|++.+... +.. +. .+.+ +.|.....+|+
T Consensus 163 ~e~~~~~~~~~~~~~~~~~~R~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~ 242 (352)
T PLN02240 163 IEEICRDIHASDPEWKIILLRYFNPVGAHPSGRIGEDPKGIPNNLMPYVQQVAVGRRPELTVFGNDYPTKDGTGVRDYIH 242 (352)
T ss_pred HHHHHHHHHHhcCCCCEEEEeecCcCCCCccccccCCCCCCcchHHHHHHHHHhCCCCceEEeCCCCCCCCCCEEEeeEE
Confidence 7776642 4688999997543210 100 00 1111 12344467899
Q ss_pred HHHHHHHHHHHhhCC----CCCCcEEEEecCC-cCHHHHHHHHHHHhhh
Q 021854 260 KEDAAFICVEALESI----PQTGLIFEVVNGE-EKVSDWKKCFSRLMEK 303 (306)
Q Consensus 260 ~~DVA~~iv~aL~~~----~~~g~~~~v~~g~-~s~~d~~~l~~~l~~~ 303 (306)
++|+|++++.++... ...+++||+++++ .+++|+.+++.++.++
T Consensus 243 v~D~a~a~~~a~~~~~~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~ 291 (352)
T PLN02240 243 VMDLADGHIAALRKLFTDPDIGCEAYNLGTGKGTSVLEMVAAFEKASGK 291 (352)
T ss_pred HHHHHHHHHHHHhhhhhccCCCCceEEccCCCcEeHHHHHHHHHHHhCC
Confidence 999999999888642 3446899999866 4899999999888764
|
|
| >PLN02206 UDP-glucuronate decarboxylase | Back alignment and domain information |
|---|
Probab=99.79 E-value=7.2e-18 Score=163.81 Aligned_cols=200 Identities=15% Similarity=0.104 Sum_probs=137.7
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhh----hc-CCCceeeeccCCCHHHHHHHhcCccEEEEc
Q 021854 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME----SF-GTYVESMAGDASNKKFLKTALRGVRSIICP 170 (306)
Q Consensus 96 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~----~~-~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~ 170 (306)
..+.|+|||||||||||++|+++|+++|++|+++.|......+ .+ ..+++++.+|+.+. ++.++|+|||+
T Consensus 116 ~~~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~~~~~~~~~~~~~~i~~D~~~~-----~l~~~D~ViHl 190 (442)
T PLN02206 116 KRKGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKENVMHHFSNPNFELIRHDVVEP-----ILLEVDQIYHL 190 (442)
T ss_pred ccCCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccchhhhhhhccCCceEEEECCccCh-----hhcCCCEEEEe
Confidence 3356899999999999999999999999999999875322111 11 23678888998764 35689999998
Q ss_pred CCc----------------------hhhhcccccCCCEEEEecCcccccCCCCc----------cccc-chHHHHHHHHH
Q 021854 171 SEG----------------------FISNAGSLKGVQHVILLSQLSVYRGSGGI----------QALM-KGNARKLAEQD 217 (306)
Q Consensus 171 ~~g----------------------~~~~~a~~~gvkr~V~iSS~~~~~~~~~~----------~~~~-~~~a~~~~~~a 217 (306)
++- .+.++|++.++ +||++||..+|...... .+.. ...+...|..+
T Consensus 191 Aa~~~~~~~~~~p~~~~~~Nv~gt~nLleaa~~~g~-r~V~~SS~~VYg~~~~~p~~E~~~~~~~P~~~~s~Y~~SK~~a 269 (442)
T PLN02206 191 ACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKRTA 269 (442)
T ss_pred eeecchhhhhcCHHHHHHHHHHHHHHHHHHHHHhCC-EEEEECChHHhCCCCCCCCCccccccCCCCCccchHHHHHHHH
Confidence 420 04566777786 89999999888532110 0100 11233345566
Q ss_pred HHHHH----hcCCCEEEEEcCcccCCC-----C-----------CCcce-eeecCCCCccccCHHHHHHHHHHHhhCCCC
Q 021854 218 ESMLM----ASGIPYTIIRTGVLQNTP-----G-----------GKQGF-QFEEGCAANGSLSKEDAAFICVEALESIPQ 276 (306)
Q Consensus 218 E~~l~----~sgi~~tiiRPg~l~~~~-----~-----------~~~~~-~~~~g~~~~~~Is~~DVA~~iv~aL~~~~~ 276 (306)
|.+++ ..+++++++||+.+.... . .+..+ .++.++....+++++|+|++++.+++...
T Consensus 270 E~~~~~y~~~~g~~~~ilR~~~vyGp~~~~~~~~~v~~~i~~~l~~~~i~i~g~G~~~rdfi~V~Dva~ai~~a~e~~~- 348 (442)
T PLN02206 270 ETLTMDYHRGANVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEH- 348 (442)
T ss_pred HHHHHHHHHHhCCCeEEEEeccccCCCCCccccchHHHHHHHHHcCCCcEEeCCCCEEEeEEeHHHHHHHHHHHHhcCC-
Confidence 66554 468999999998754221 0 11222 23345555789999999999999987542
Q ss_pred CCcEEEEecCC-cCHHHHHHHHHHHhhh
Q 021854 277 TGLIFEVVNGE-EKVSDWKKCFSRLMEK 303 (306)
Q Consensus 277 ~g~~~~v~~g~-~s~~d~~~l~~~l~~~ 303 (306)
+.+||++++. .++.|+.+++.++.+.
T Consensus 349 -~g~yNIgs~~~~sl~Elae~i~~~~g~ 375 (442)
T PLN02206 349 -VGPFNLGNPGEFTMLELAKVVQETIDP 375 (442)
T ss_pred -CceEEEcCCCceeHHHHHHHHHHHhCC
Confidence 4589999865 5899999999887653
|
|
| >PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=1e-17 Score=154.76 Aligned_cols=188 Identities=17% Similarity=0.135 Sum_probs=127.0
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhc--CccEEEEcCCch---
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--GVRSIICPSEGF--- 174 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~--~~d~vi~~~~g~--- 174 (306)
|+||||||+|+||++++++|+++| +|+++.|... .+.+|++|.+.+.++++ ++|+|||+++-.
T Consensus 1 m~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~~-----------~~~~Dl~d~~~~~~~~~~~~~D~Vih~Aa~~~~~ 68 (299)
T PRK09987 1 MNILLFGKTGQVGWELQRALAPLG-NLIALDVHST-----------DYCGDFSNPEGVAETVRKIRPDVIVNAAAHTAVD 68 (299)
T ss_pred CeEEEECCCCHHHHHHHHHhhccC-CEEEeccccc-----------cccCCCCCHHHHHHHHHhcCCCEEEECCccCCcc
Confidence 589999999999999999999999 7988887541 34689999999999998 479999983310
Q ss_pred -------------------hhhcccccCCCEEEEecCcccccCCCC--c---ccccc-hHHHHHHHHHHHHHHhcCCCEE
Q 021854 175 -------------------ISNAGSLKGVQHVILLSQLSVYRGSGG--I---QALMK-GNARKLAEQDESMLMASGIPYT 229 (306)
Q Consensus 175 -------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~--~---~~~~~-~~a~~~~~~aE~~l~~sgi~~t 229 (306)
+.++|++.++ +||++||..+|..... . ....+ ..+...|..+|.+++....+++
T Consensus 69 ~~~~~~~~~~~~N~~~~~~l~~aa~~~g~-~~v~~Ss~~Vy~~~~~~p~~E~~~~~P~~~Yg~sK~~~E~~~~~~~~~~~ 147 (299)
T PRK09987 69 KAESEPEFAQLLNATSVEAIAKAANEVGA-WVVHYSTDYVFPGTGDIPWQETDATAPLNVYGETKLAGEKALQEHCAKHL 147 (299)
T ss_pred hhhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEccceEECCCCCCCcCCCCCCCCCCHHHHHHHHHHHHHHHhCCCEE
Confidence 3455667776 7999999988753211 1 01111 2244567788999888778899
Q ss_pred EEEcCcccCCCC------------CCcceeeecCCC----CccccCHHHHHHHHHHHhhCCCCCCcEEEEecCC-cCHHH
Q 021854 230 IIRTGVLQNTPG------------GKQGFQFEEGCA----ANGSLSKEDAAFICVEALESIPQTGLIFEVVNGE-EKVSD 292 (306)
Q Consensus 230 iiRPg~l~~~~~------------~~~~~~~~~g~~----~~~~Is~~DVA~~iv~aL~~~~~~g~~~~v~~g~-~s~~d 292 (306)
|+||+++..... .+..+.+ .++. .......+|+++++..++..+.. +.+||++++. .++.|
T Consensus 148 ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~v-~~d~~g~~~~~~~~~d~~~~~~~~~~~~~~~-~giyni~~~~~~s~~e 225 (299)
T PRK09987 148 IFRTSWVYAGKGNNFAKTMLRLAKEREELSV-INDQFGAPTGAELLADCTAHAIRVALNKPEV-AGLYHLVASGTTTWHD 225 (299)
T ss_pred EEecceecCCCCCCHHHHHHHHHhcCCCeEE-eCCCcCCCCCHHHHHHHHHHHHHHhhccCCC-CCeEEeeCCCCccHHH
Confidence 999998653221 1112222 1221 11122335566666666654333 3599999865 58999
Q ss_pred HHHHHHHHhh
Q 021854 293 WKKCFSRLME 302 (306)
Q Consensus 293 ~~~l~~~l~~ 302 (306)
+.+.+.++.+
T Consensus 226 ~~~~i~~~~~ 235 (299)
T PRK09987 226 YAALVFEEAR 235 (299)
T ss_pred HHHHHHHHHH
Confidence 9888766543
|
|
| >PLN02653 GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.8e-17 Score=155.33 Aligned_cols=204 Identities=12% Similarity=-0.008 Sum_probs=139.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcch-----hhhh------cCCCceeeeccCCCHHHHHHHhcC--c
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-----AMES------FGTYVESMAGDASNKKFLKTALRG--V 164 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~-----~~~~------~~~~v~~v~~D~~d~~~l~~~~~~--~ 164 (306)
++++||||||+|+||++++++|+++|++|+++.|..+. .... .+.+++++.+|++|.+++.++++. +
T Consensus 5 ~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 84 (340)
T PLN02653 5 PRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDDIKP 84 (340)
T ss_pred CCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHHcCC
Confidence 46899999999999999999999999999999987542 1111 123578999999999999999985 5
Q ss_pred cEEEEcCCch----------------------hhhcccccCCC-----EEEEecCcccccCCCCc----cccc-chHHHH
Q 021854 165 RSIICPSEGF----------------------ISNAGSLKGVQ-----HVILLSQLSVYRGSGGI----QALM-KGNARK 212 (306)
Q Consensus 165 d~vi~~~~g~----------------------~~~~a~~~gvk-----r~V~iSS~~~~~~~~~~----~~~~-~~~a~~ 212 (306)
|+|||+++.. +.+++...+++ +||++||..+|...... .+.. ...+..
T Consensus 85 d~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~E~~~~~p~~~Y~~ 164 (340)
T PLN02653 85 DEVYNLAAQSHVAVSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGSSEMYGSTPPPQSETTPFHPRSPYAV 164 (340)
T ss_pred CEEEECCcccchhhhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEeccHHHhCCCCCCCCCCCCCCCCChhHH
Confidence 9999984310 23445556664 89999998877642210 0000 112333
Q ss_pred HHHHHHHHHH----hcCCCEEEEEcCc-ccCCCC----------------CCcc--eeeecCCCCccccCHHHHHHHHHH
Q 021854 213 LAEQDESMLM----ASGIPYTIIRTGV-LQNTPG----------------GKQG--FQFEEGCAANGSLSKEDAAFICVE 269 (306)
Q Consensus 213 ~~~~aE~~l~----~sgi~~tiiRPg~-l~~~~~----------------~~~~--~~~~~g~~~~~~Is~~DVA~~iv~ 269 (306)
.|..+|.+++ +.+++++..|+.. +..... .+.. +..+.++....+++++|+|++++.
T Consensus 165 sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v~D~a~a~~~ 244 (340)
T PLN02653 165 AKVAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRAVGRIKVGLQKKLFLGNLDASRDWGFAGDYVEAMWL 244 (340)
T ss_pred HHHHHHHHHHHHHHHcCCeEEEeeeccccCCCCCcccchhHHHHHHHHHHcCCCCceEeCCCcceecceeHHHHHHHHHH
Confidence 4555666553 3577766666533 211110 1111 222456666899999999999999
Q ss_pred HhhCCCCCCcEEEEecCC-cCHHHHHHHHHHHhhh
Q 021854 270 ALESIPQTGLIFEVVNGE-EKVSDWKKCFSRLMEK 303 (306)
Q Consensus 270 aL~~~~~~g~~~~v~~g~-~s~~d~~~l~~~l~~~ 303 (306)
+++... +..||+++++ .++.++.+.+.++.+.
T Consensus 245 ~~~~~~--~~~yni~~g~~~s~~e~~~~i~~~~g~ 277 (340)
T PLN02653 245 MLQQEK--PDDYVVATEESHTVEEFLEEAFGYVGL 277 (340)
T ss_pred HHhcCC--CCcEEecCCCceeHHHHHHHHHHHcCC
Confidence 998643 4689999876 5899999988887764
|
|
| >PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases | Back alignment and domain information |
|---|
Probab=99.78 E-value=2.3e-18 Score=156.72 Aligned_cols=192 Identities=18% Similarity=0.241 Sum_probs=136.5
Q ss_pred EEEEcCCChHHHHHHHHHHHCCC-eEEEEecCcchhh---hhc----C-CCce----eeeccCCCHHHHHHHhc--CccE
Q 021854 102 VLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAM---ESF----G-TYVE----SMAGDASNKKFLKTALR--GVRS 166 (306)
Q Consensus 102 ilVtGatG~iG~~l~~~L~~~g~-~V~~l~R~~~~~~---~~~----~-~~v~----~v~~D~~d~~~l~~~~~--~~d~ 166 (306)
||||||+|+||+++++||++.+. ++++++|+..++. ..+ + .+++ .+.+|++|.+.+..+|+ ++|+
T Consensus 1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~~pdi 80 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEYKPDI 80 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT--T-SE
T ss_pred CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhcCCCE
Confidence 79999999999999999999985 7889999887622 122 2 2344 45899999999999999 8899
Q ss_pred EEEcCCc----------------------hhhhcccccCCCEEEEecCcccccCCCCcccccchHHHHHHHHHHHHHHhc
Q 021854 167 IICPSEG----------------------FISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMAS 224 (306)
Q Consensus 167 vi~~~~g----------------------~~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~~~~~aE~~l~~s 224 (306)
|||+++- .++++|.+++|++||++||..+.+|.+.++.. |+.+|.+++..
T Consensus 81 VfHaAA~KhVpl~E~~p~eav~tNv~GT~nv~~aa~~~~v~~~v~ISTDKAv~PtnvmGat--------KrlaE~l~~~~ 152 (293)
T PF02719_consen 81 VFHAAALKHVPLMEDNPFEAVKTNVLGTQNVAEAAIEHGVERFVFISTDKAVNPTNVMGAT--------KRLAEKLVQAA 152 (293)
T ss_dssp EEE------HHHHCCCHHHHHHHHCHHHHHHHHHHHHTT-SEEEEEEECGCSS--SHHHHH--------HHHHHHHHHHH
T ss_pred EEEChhcCCCChHHhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccccCCCCcHHHHH--------HHHHHHHHHHH
Confidence 9998551 15678888999999999999999988777655 88899988752
Q ss_pred -------CCCEEEEEcCcccCCCC-----------CCcceeeecCCCCccccCHHHHHHHHHHHhhCCCCCCcEEEEecC
Q 021854 225 -------GIPYTIIRTGVLQNTPG-----------GKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVVNG 286 (306)
Q Consensus 225 -------gi~~tiiRPg~l~~~~~-----------~~~~~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~~~g~~~~v~~g 286 (306)
+..++++|.|.+.+..+ .+.++.++..+-.+-+++.++.++.++.++... ..|++|.+--|
T Consensus 153 ~~~~~~~~t~f~~VRFGNVlgS~GSVip~F~~Qi~~g~PlTvT~p~mtRffmti~EAv~Lvl~a~~~~-~~geifvl~mg 231 (293)
T PF02719_consen 153 NQYSGNSDTKFSSVRFGNVLGSRGSVIPLFKKQIKNGGPLTVTDPDMTRFFMTIEEAVQLVLQAAALA-KGGEIFVLDMG 231 (293)
T ss_dssp CCTSSSS--EEEEEEE-EETTGTTSCHHHHHHHHHTTSSEEECETT-EEEEE-HHHHHHHHHHHHHH---TTEEEEE---
T ss_pred hhhCCCCCcEEEEEEecceecCCCcHHHHHHHHHHcCCcceeCCCCcEEEEecHHHHHHHHHHHHhhC-CCCcEEEecCC
Confidence 46789999999664433 455666655555577889999999999998654 34778988885
Q ss_pred C-cCHHHHHHHHHHHhh
Q 021854 287 E-EKVSDWKKCFSRLME 302 (306)
Q Consensus 287 ~-~s~~d~~~l~~~l~~ 302 (306)
+ .++.|+++.+-++.+
T Consensus 232 ~~v~I~dlA~~~i~~~g 248 (293)
T PF02719_consen 232 EPVKILDLAEAMIELSG 248 (293)
T ss_dssp TCEECCCHHHHHHHHTT
T ss_pred CCcCHHHHHHHHHhhcc
Confidence 5 578888888877664
|
The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A. |
| >PRK10084 dTDP-glucose 4,6 dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.9e-17 Score=155.65 Aligned_cols=202 Identities=14% Similarity=0.105 Sum_probs=135.6
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCe-EEEEecCcc--h---hhhhc-CCCceeeeccCCCHHHHHHHhcC--ccEEEEc
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVKRTR-IKALVKDKR--N---AMESF-GTYVESMAGDASNKKFLKTALRG--VRSIICP 170 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~g~~-V~~l~R~~~--~---~~~~~-~~~v~~v~~D~~d~~~l~~~~~~--~d~vi~~ 170 (306)
|+||||||+|+||++++++|+++|++ |+++.|... . ..... +..++++.+|++|.+++.+++++ +|+|||+
T Consensus 1 mkilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~ 80 (352)
T PRK10084 1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSDSERYVFEHADICDRAELDRIFAQHQPDAVMHL 80 (352)
T ss_pred CeEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHHHHhcccCCceEEEEecCCCHHHHHHHHHhcCCCEEEEC
Confidence 47999999999999999999999976 444443221 1 11111 23577899999999999999974 7999998
Q ss_pred CCch----------------------hhhccccc---------CCCEEEEecCcccccCCC-----------Cc----cc
Q 021854 171 SEGF----------------------ISNAGSLK---------GVQHVILLSQLSVYRGSG-----------GI----QA 204 (306)
Q Consensus 171 ~~g~----------------------~~~~a~~~---------gvkr~V~iSS~~~~~~~~-----------~~----~~ 204 (306)
++.. +.++|.+. ++++||++||..+|.... +. ..
T Consensus 81 A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~E~~~ 160 (352)
T PRK10084 81 AAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDEVENSEELPLFTETTA 160 (352)
T ss_pred CcccCCcchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCccccccccccCCCccccCC
Confidence 4310 23344432 567999999987775310 00 01
Q ss_pred ccc-hHHHHHHHHHHHHHH----hcCCCEEEEEcCcccCCCC--------------CCccee-eecCCCCccccCHHHHH
Q 021854 205 LMK-GNARKLAEQDESMLM----ASGIPYTIIRTGVLQNTPG--------------GKQGFQ-FEEGCAANGSLSKEDAA 264 (306)
Q Consensus 205 ~~~-~~a~~~~~~aE~~l~----~sgi~~tiiRPg~l~~~~~--------------~~~~~~-~~~g~~~~~~Is~~DVA 264 (306)
+.+ ..+...|..+|.+++ ..+++++++||+.+..... .+..+. ++.++...++++++|+|
T Consensus 161 ~~p~~~Y~~sK~~~E~~~~~~~~~~g~~~vilr~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~D~a 240 (352)
T PRK10084 161 YAPSSPYSASKASSDHLVRAWLRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDHA 240 (352)
T ss_pred CCCCChhHHHHHHHHHHHHHHHHHhCCCEEEEeccceeCCCcCccchHHHHHHHHhcCCCeEEeCCCCeEEeeEEHHHHH
Confidence 111 122334555555543 4689999999987543211 112222 34566678899999999
Q ss_pred HHHHHHhhCCCCCCcEEEEecCC-cCHHHHHHHHHHHhh
Q 021854 265 FICVEALESIPQTGLIFEVVNGE-EKVSDWKKCFSRLME 302 (306)
Q Consensus 265 ~~iv~aL~~~~~~g~~~~v~~g~-~s~~d~~~l~~~l~~ 302 (306)
+++..+++.+ ..+++|++++++ .++.++.+.+.+..+
T Consensus 241 ~a~~~~l~~~-~~~~~yni~~~~~~s~~~~~~~i~~~~~ 278 (352)
T PRK10084 241 RALYKVVTEG-KAGETYNIGGHNEKKNLDVVLTICDLLD 278 (352)
T ss_pred HHHHHHHhcC-CCCceEEeCCCCcCcHHHHHHHHHHHhc
Confidence 9999988754 346899999876 478898888877665
|
|
| >TIGR01179 galE UDP-glucose-4-epimerase | Back alignment and domain information |
|---|
Probab=99.78 E-value=2.6e-17 Score=152.02 Aligned_cols=204 Identities=19% Similarity=0.246 Sum_probs=138.5
Q ss_pred eEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcC-----CCceeeeccCCCHHHHHHHhc--CccEEEEcCCc
Q 021854 101 AVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG-----TYVESMAGDASNKKFLKTALR--GVRSIICPSEG 173 (306)
Q Consensus 101 ~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~-----~~v~~v~~D~~d~~~l~~~~~--~~d~vi~~~~g 173 (306)
+|+||||+|+||+.++++|+++|++|+++.|.......... .+++++.+|+.|.+.+.++++ ++|+|||+++.
T Consensus 1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vv~~ag~ 80 (328)
T TIGR01179 1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRGERITRVTFVEGDLRDRELLDRLFEEHKIDAVIHFAGL 80 (328)
T ss_pred CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhhccccceEEEECCCCCHHHHHHHHHhCCCcEEEECccc
Confidence 58999999999999999999999999987654322111111 147788999999999999886 68999998431
Q ss_pred h----------------------hhhcccccCCCEEEEecCcccccCCCCc--c---c-ccchHHHHHHHHHHHHHH---
Q 021854 174 F----------------------ISNAGSLKGVQHVILLSQLSVYRGSGGI--Q---A-LMKGNARKLAEQDESMLM--- 222 (306)
Q Consensus 174 ~----------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~--~---~-~~~~~a~~~~~~aE~~l~--- 222 (306)
. +.+++.+.++++||++||..++...... . . .....+...|..+|.+++
T Consensus 81 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~ss~~~~g~~~~~~~~e~~~~~~~~~y~~sK~~~e~~~~~~~ 160 (328)
T TIGR01179 81 IAVGESVQDPLKYYRNNVVNTLNLLEAMQQTGVKKFIFSSSAAVYGEPSSIPISEDSPLGPINPYGRSKLMSERILRDLS 160 (328)
T ss_pred cCcchhhcCchhhhhhhHHHHHHHHHHHHhcCCCEEEEecchhhcCCCCCCCccccCCCCCCCchHHHHHHHHHHHHHHH
Confidence 0 3345667888999999998776432110 0 0 000122334555565554
Q ss_pred -h-cCCCEEEEEcCcccCCCC------------------------CCcceee-------ecCCCCccccCHHHHHHHHHH
Q 021854 223 -A-SGIPYTIIRTGVLQNTPG------------------------GKQGFQF-------EEGCAANGSLSKEDAAFICVE 269 (306)
Q Consensus 223 -~-sgi~~tiiRPg~l~~~~~------------------------~~~~~~~-------~~g~~~~~~Is~~DVA~~iv~ 269 (306)
+ .+++++++||+.+..... ....+.. ..++....+|+.+|+|+++..
T Consensus 161 ~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~D~a~~~~~ 240 (328)
T TIGR01179 161 KADPGLSYVILRYFNVAGADPEGTIGEDPPGITHLIPYACQVAVGKRDKLTIFGTDYPTPDGTCVRDYIHVMDLADAHLA 240 (328)
T ss_pred HhccCCCEEEEecCcccCCCCCCccccCCcccchHHHHHHHHHHhCCCCeEEeCCcccCCCCceEEeeeeHHHHHHHHHH
Confidence 3 689999999977443210 0011111 122333578999999999999
Q ss_pred HhhCC--CCCCcEEEEecCC-cCHHHHHHHHHHHhhhc
Q 021854 270 ALESI--PQTGLIFEVVNGE-EKVSDWKKCFSRLMEKT 304 (306)
Q Consensus 270 aL~~~--~~~g~~~~v~~g~-~s~~d~~~l~~~l~~~~ 304 (306)
++... ...+++|++++++ .++.|+.+.+.++.+++
T Consensus 241 ~~~~~~~~~~~~~~n~~~~~~~s~~ei~~~~~~~~g~~ 278 (328)
T TIGR01179 241 ALEYLLNGGESHVYNLGYGQGFSVLEVIEAFKKVSGVD 278 (328)
T ss_pred HHhhhhcCCCcceEEcCCCCcccHHHHHHHHHHHhCCC
Confidence 98753 2456899998765 68999999999887654
|
This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately. |
| >TIGR01746 Thioester-redct thioester reductase domain | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.5e-17 Score=155.86 Aligned_cols=199 Identities=18% Similarity=0.225 Sum_probs=136.8
Q ss_pred eEEEEcCCChHHHHHHHHHHHCC--CeEEEEecCcchh------hhhc----------C-CCceeeeccCCC------HH
Q 021854 101 AVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRNA------MESF----------G-TYVESMAGDASN------KK 155 (306)
Q Consensus 101 ~ilVtGatG~iG~~l~~~L~~~g--~~V~~l~R~~~~~------~~~~----------~-~~v~~v~~D~~d------~~ 155 (306)
+|+||||||+||++++++|+++| ++|++++|+.+.. .+.+ . .+++++.+|+++ .+
T Consensus 1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~ 80 (367)
T TIGR01746 1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA 80 (367)
T ss_pred CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence 58999999999999999999998 6799999987631 1100 1 468899999875 35
Q ss_pred HHHHHhcCccEEEEcCCc-------------------hhhhcccccCCCEEEEecCcccccCCCCc-----------ccc
Q 021854 156 FLKTALRGVRSIICPSEG-------------------FISNAGSLKGVQHVILLSQLSVYRGSGGI-----------QAL 205 (306)
Q Consensus 156 ~l~~~~~~~d~vi~~~~g-------------------~~~~~a~~~gvkr~V~iSS~~~~~~~~~~-----------~~~ 205 (306)
.+..+.+++|+|||+++. .+.+++.+.++++||++||.+++...... ...
T Consensus 81 ~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~nv~g~~~ll~~a~~~~~~~~v~iSS~~v~~~~~~~~~~~~~~~~~~~~~ 160 (367)
T TIGR01746 81 EWERLAENVDTIVHNGALVNWVYPYSELRAANVLGTREVLRLAASGRAKPLHYVSTISVLAAIDLSTVTEDDAIVTPPPG 160 (367)
T ss_pred HHHHHHhhCCEEEeCCcEeccCCcHHHHhhhhhHHHHHHHHHHhhCCCceEEEEccccccCCcCCCCccccccccccccc
Confidence 677788899999998431 03456777889999999999887532110 000
Q ss_pred cchHHHHHHHHHHHHHHh---cCCCEEEEEcCcccCCCCCCc----ce------------eeecCCC-CccccCHHHHHH
Q 021854 206 MKGNARKLAEQDESMLMA---SGIPYTIIRTGVLQNTPGGKQ----GF------------QFEEGCA-ANGSLSKEDAAF 265 (306)
Q Consensus 206 ~~~~a~~~~~~aE~~l~~---sgi~~tiiRPg~l~~~~~~~~----~~------------~~~~g~~-~~~~Is~~DVA~ 265 (306)
....+...|..+|.+++. .+++++++|||.+......+. .. .++.... ...+++++|+|+
T Consensus 161 ~~~~Y~~sK~~~E~~~~~~~~~g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~vddva~ 240 (367)
T TIGR01746 161 LAGGYAQSKWVAELLVREASDRGLPVTIVRPGRILGNSYTGAINSSDILWRMVKGCLALGAYPDSPELTEDLTPVDYVAR 240 (367)
T ss_pred cCCChHHHHHHHHHHHHHHHhcCCCEEEECCCceeecCCCCCCCchhHHHHHHHHHHHhCCCCCCCccccCcccHHHHHH
Confidence 001233345556666543 499999999999764321110 00 1112222 356899999999
Q ss_pred HHHHHhhCCCC--CCcEEEEecCC-cCHHHHHHHHHH
Q 021854 266 ICVEALESIPQ--TGLIFEVVNGE-EKVSDWKKCFSR 299 (306)
Q Consensus 266 ~iv~aL~~~~~--~g~~~~v~~g~-~s~~d~~~l~~~ 299 (306)
+++.++..+.. .+++|+++++. .++.++.+++.+
T Consensus 241 ai~~~~~~~~~~~~~~~~~v~~~~~~s~~e~~~~i~~ 277 (367)
T TIGR01746 241 AIVALSSQPAASAGGPVFHVVNPEPVSLDEFLEWLER 277 (367)
T ss_pred HHHHHHhCCCcccCCceEEecCCCCCCHHHHHHHHHH
Confidence 99999877654 27899999854 578888887776
|
It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold. |
| >PLN02996 fatty acyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.4e-17 Score=163.72 Aligned_cols=205 Identities=15% Similarity=0.225 Sum_probs=142.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCC---eEEEEecCcch------hh-h-----hc---------------CCCceee
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRT---RIKALVKDKRN------AM-E-----SF---------------GTYVESM 147 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~---~V~~l~R~~~~------~~-~-----~~---------------~~~v~~v 147 (306)
.+++|+|||||||||+.++++|++.+. +|++++|.... .. + .+ ..+++++
T Consensus 10 ~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~~i 89 (491)
T PLN02996 10 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTPV 89 (491)
T ss_pred CCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEEEE
Confidence 478999999999999999999998653 67899997742 11 0 01 1468899
Q ss_pred eccCC-------CHHHHHHHhcCccEEEEcCCc--h-----------------hhhccccc-CCCEEEEecCcccccCCC
Q 021854 148 AGDAS-------NKKFLKTALRGVRSIICPSEG--F-----------------ISNAGSLK-GVQHVILLSQLSVYRGSG 200 (306)
Q Consensus 148 ~~D~~-------d~~~l~~~~~~~d~vi~~~~g--~-----------------~~~~a~~~-gvkr~V~iSS~~~~~~~~ 200 (306)
.+|++ |.+.++.+++++|+|||+++. + +.+++++. ++++||++||..++....
T Consensus 90 ~GDl~~~~LGLs~~~~~~~l~~~vD~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~k~~V~vST~~vyG~~~ 169 (491)
T PLN02996 90 PGDISYDDLGVKDSNLREEMWKEIDIVVNLAATTNFDERYDVALGINTLGALNVLNFAKKCVKVKMLLHVSTAYVCGEKS 169 (491)
T ss_pred ecccCCcCCCCChHHHHHHHHhCCCEEEECccccCCcCCHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeeeEEecCCC
Confidence 99998 555677888999999998431 1 34556654 789999999998875321
Q ss_pred Cc---ccc------------------------------------------------------cchHHHHHHHHHHHHHHh
Q 021854 201 GI---QAL------------------------------------------------------MKGNARKLAEQDESMLMA 223 (306)
Q Consensus 201 ~~---~~~------------------------------------------------------~~~~a~~~~~~aE~~l~~ 223 (306)
+. ..| .+..+...|..+|.++++
T Consensus 170 ~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pn~Y~~TK~~aE~lv~~ 249 (491)
T PLN02996 170 GLILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKLHGWPNTYVFTKAMGEMLLGN 249 (491)
T ss_pred ceeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHHhCCCCCchHhhHHHHHHHHHH
Confidence 10 000 011234456678888865
Q ss_pred --cCCCEEEEEcCcccCCC-----CC--------------Ccc---eeeecCCCCccccCHHHHHHHHHHHhhCC--C-C
Q 021854 224 --SGIPYTIIRTGVLQNTP-----GG--------------KQG---FQFEEGCAANGSLSKEDAAFICVEALESI--P-Q 276 (306)
Q Consensus 224 --sgi~~tiiRPg~l~~~~-----~~--------------~~~---~~~~~g~~~~~~Is~~DVA~~iv~aL~~~--~-~ 276 (306)
.+++++|+||+.+.... ++ ..+ ..++.|+....+++++||+++++.++... . .
T Consensus 250 ~~~~lpv~i~RP~~V~G~~~~p~~gwi~~~~~~~~i~~~~~~g~~~~~~gdg~~~~D~v~Vddvv~a~l~a~~~~~~~~~ 329 (491)
T PLN02996 250 FKENLPLVIIRPTMITSTYKEPFPGWIEGLRTIDSVIVGYGKGKLTCFLADPNSVLDVIPADMVVNAMIVAMAAHAGGQG 329 (491)
T ss_pred hcCCCCEEEECCCEeccCCcCCCCCcccchhhHHHHHHHhccceEeEEecCCCeecceecccHHHHHHHHHHHHhhccCC
Confidence 58999999999864321 11 111 12345566688999999999999998753 1 3
Q ss_pred CCcEEEEecC---CcCHHHHHHHHHHHhh
Q 021854 277 TGLIFEVVNG---EEKVSDWKKCFSRLME 302 (306)
Q Consensus 277 ~g~~~~v~~g---~~s~~d~~~l~~~l~~ 302 (306)
.+.+||++++ +.++.++.+++.+...
T Consensus 330 ~~~vYNi~s~~~~~~s~~ei~~~~~~~~~ 358 (491)
T PLN02996 330 SEIIYHVGSSLKNPVKFSNLHDFAYRYFS 358 (491)
T ss_pred CCcEEEecCCCCCcccHHHHHHHHHHHhh
Confidence 4679999987 4588888887766543
|
|
| >COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.77 E-value=3.5e-17 Score=147.76 Aligned_cols=197 Identities=22% Similarity=0.289 Sum_probs=152.6
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcCCc------
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG------ 173 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~g------ 173 (306)
++||||||||++|++++++|+++|++|++++|++++..... .++++..+|+.+...+..+++|++.++++.+.
T Consensus 1 ~~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~-~~v~~~~~d~~~~~~l~~a~~G~~~~~~i~~~~~~~~~ 79 (275)
T COG0702 1 MKILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALA-GGVEVVLGDLRDPKSLVAGAKGVDGVLLISGLLDGSDA 79 (275)
T ss_pred CeEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhhc-CCcEEEEeccCCHhHHHHHhccccEEEEEecccccccc
Confidence 58999999999999999999999999999999999877666 78999999999999999999999999987330
Q ss_pred h-------hhhccccc--CCCEEEEecCcccccCCCCcccccchHHHHHHHHHHHHHHhcCCCEEEEEcCcc-cCCCCC-
Q 021854 174 F-------ISNAGSLK--GVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMASGIPYTIIRTGVL-QNTPGG- 242 (306)
Q Consensus 174 ~-------~~~~a~~~--gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~~~~~aE~~l~~sgi~~tiiRPg~l-~~~~~~- 242 (306)
+ ..+.+++. ++++++++|...+..... . .....+..+|..+.+++++++++||..+ .+....
T Consensus 80 ~~~~~~~~~~~~a~~a~~~~~~~~~~s~~~~~~~~~--~-----~~~~~~~~~e~~l~~sg~~~t~lr~~~~~~~~~~~~ 152 (275)
T COG0702 80 FRAVQVTAVVRAAEAAGAGVKHGVSLSVLGADAASP--S-----ALARAKAAVEAALRSSGIPYTTLRRAAFYLGAGAAF 152 (275)
T ss_pred hhHHHHHHHHHHHHHhcCCceEEEEeccCCCCCCCc--c-----HHHHHHHHHHHHHHhcCCCeEEEecCeeeeccchhH
Confidence 1 23344444 488999999887754221 1 2334577899999999999999996664 332211
Q ss_pred ------CcceeeecCCCCccccCHHHHHHHHHHHhhCCCCCCcEEEEecCC-cCHHHHHHHHHHHhhhc
Q 021854 243 ------KQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVVNGE-EKVSDWKKCFSRLMEKT 304 (306)
Q Consensus 243 ------~~~~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~~~g~~~~v~~g~-~s~~d~~~l~~~l~~~~ 304 (306)
........+....+++..+|++.++...+..+...+++|++.++. .+..+..+.+.....++
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~i~~~d~a~~~~~~l~~~~~~~~~~~l~g~~~~~~~~~~~~l~~~~gr~ 221 (275)
T COG0702 153 IEAAEAAGLPVIPRGIGRLSPIAVDDVAEALAAALDAPATAGRTYELAGPEALTLAELASGLDYTIGRP 221 (275)
T ss_pred HHHHHhhCCceecCCCCceeeeEHHHHHHHHHHHhcCCcccCcEEEccCCceecHHHHHHHHHHHhCCc
Confidence 111122233335778999999999999999888888999999864 47788888887777665
|
|
| >PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.7e-17 Score=153.25 Aligned_cols=194 Identities=12% Similarity=0.028 Sum_probs=126.9
Q ss_pred EEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCH---HH-HHHHhc-----CccEEEEcCC
Q 021854 102 VLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNK---KF-LKTALR-----GVRSIICPSE 172 (306)
Q Consensus 102 ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~---~~-l~~~~~-----~~d~vi~~~~ 172 (306)
||||||+|+||++++++|++.|++++++.|+.+..... .....+|+.|. +. ++.+++ ++|+|||+++
T Consensus 2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~~~----~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~Vih~A~ 77 (308)
T PRK11150 2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKF----VNLVDLDIADYMDKEDFLAQIMAGDDFGDIEAIFHEGA 77 (308)
T ss_pred EEEecCCcHHHHHHHHHHHhCCCceEEEecCCCcchHH----HhhhhhhhhhhhhHHHHHHHHhcccccCCccEEEECce
Confidence 89999999999999999999999888888776432111 12233455543 33 344443 6899999843
Q ss_pred c--------------------hhhhcccccCCCEEEEecCcccccCCCCc--c----cccchHHHHHHHHHHHHHH----
Q 021854 173 G--------------------FISNAGSLKGVQHVILLSQLSVYRGSGGI--Q----ALMKGNARKLAEQDESMLM---- 222 (306)
Q Consensus 173 g--------------------~~~~~a~~~gvkr~V~iSS~~~~~~~~~~--~----~~~~~~a~~~~~~aE~~l~---- 222 (306)
. .+.++|++.++ +||++||..+|...... . ....+.+...|..+|++++
T Consensus 78 ~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~-~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~ 156 (308)
T PRK11150 78 CSSTTEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAATYGGRTDDFIEEREYEKPLNVYGYSKFLFDEYVRQILP 156 (308)
T ss_pred ecCCcCCChHHHHHHHHHHHHHHHHHHHHcCC-cEEEEcchHHhCcCCCCCCccCCCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 1 04456777787 69999999887642210 0 0001123334555565554
Q ss_pred hcCCCEEEEEcCcccCCCC-C-----------------Ccce-ee-ecCCCCccccCHHHHHHHHHHHhhCCCCCCcEEE
Q 021854 223 ASGIPYTIIRTGVLQNTPG-G-----------------KQGF-QF-EEGCAANGSLSKEDAAFICVEALESIPQTGLIFE 282 (306)
Q Consensus 223 ~sgi~~tiiRPg~l~~~~~-~-----------------~~~~-~~-~~g~~~~~~Is~~DVA~~iv~aL~~~~~~g~~~~ 282 (306)
+.+++++++||+.+..... . +... .+ +.++....+++++|+|++++.+++... +.+||
T Consensus 157 ~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~r~~i~v~D~a~a~~~~~~~~~--~~~yn 234 (308)
T PRK11150 157 EANSQICGFRYFNVYGPREGHKGSMASVAFHLNNQLNNGENPKLFEGSENFKRDFVYVGDVAAVNLWFWENGV--SGIFN 234 (308)
T ss_pred HcCCCEEEEeeeeecCCCCCCCCccchhHHHHHHHHhcCCCCEEecCCCceeeeeeeHHHHHHHHHHHHhcCC--CCeEE
Confidence 4689999999988543211 0 1111 11 122334688999999999999887643 45999
Q ss_pred EecCC-cCHHHHHHHHHHHhh
Q 021854 283 VVNGE-EKVSDWKKCFSRLME 302 (306)
Q Consensus 283 v~~g~-~s~~d~~~l~~~l~~ 302 (306)
++++. .++.|+.+++.++.+
T Consensus 235 i~~~~~~s~~el~~~i~~~~~ 255 (308)
T PRK11150 235 CGTGRAESFQAVADAVLAYHK 255 (308)
T ss_pred cCCCCceeHHHHHHHHHHHhC
Confidence 99876 589999999988765
|
|
| >PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=4.4e-17 Score=144.53 Aligned_cols=190 Identities=16% Similarity=0.160 Sum_probs=130.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhh-------hcCCCceeeeccCCCHHHHHHHhc-------C
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME-------SFGTYVESMAGDASNKKFLKTALR-------G 163 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~-------~~~~~v~~v~~D~~d~~~l~~~~~-------~ 163 (306)
++++|+||||+|+||++++++|+++|++|+++.|...+..+ ..+.++.++.+|+.|.+++.++++ +
T Consensus 5 ~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~ 84 (249)
T PRK12825 5 MGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVERFGR 84 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHHHcCC
Confidence 46899999999999999999999999999888887654211 123468899999999998887764 5
Q ss_pred ccEEEEcCCc----h----------------------hh----hcccccCCCEEEEecCcccccCCCCcccccchHHHH-
Q 021854 164 VRSIICPSEG----F----------------------IS----NAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK- 212 (306)
Q Consensus 164 ~d~vi~~~~g----~----------------------~~----~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~- 212 (306)
+|+|||+++. . +. +.+++.++++||++||..++.+......|..+++..
T Consensus 85 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~i~~SS~~~~~~~~~~~~y~~sK~~~~ 164 (249)
T PRK12825 85 IDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQRGGRIVNISSVAGLPGWPGRSNYAAAKAGLV 164 (249)
T ss_pred CCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECccccCCCCCCchHHHHHHHHHH
Confidence 6999998431 0 11 112456789999999998876655555555433211
Q ss_pred -HHHHHHHHHHhcCCCEEEEEcCcccCCCCCCccee--eec--CCCCccccCHHHHHHHHHHHhhCCC--CCCcEEEEec
Q 021854 213 -LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQ--FEE--GCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVN 285 (306)
Q Consensus 213 -~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~~~~~--~~~--g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~~~v~~ 285 (306)
+.+.....+...+++++++|||++........... ... ......+++++|+|+++..++.++. ..|++|++++
T Consensus 165 ~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~~~~~~g~~~~i~~ 244 (249)
T PRK12825 165 GLTKALARELAEYGITVNMVAPGDIDTDMKEATIEEAREAKDAETPLGRSGTPEDIARAVAFLCSDASDYITGQVIEVTG 244 (249)
T ss_pred HHHHHHHHHHhhcCeEEEEEEECCccCCccccccchhHHhhhccCCCCCCcCHHHHHHHHHHHhCccccCcCCCEEEeCC
Confidence 11222233445799999999999764432111000 001 1223447899999999999997653 4689999998
Q ss_pred CC
Q 021854 286 GE 287 (306)
Q Consensus 286 g~ 287 (306)
|.
T Consensus 245 g~ 246 (249)
T PRK12825 245 GV 246 (249)
T ss_pred CE
Confidence 74
|
|
| >COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.76 E-value=2.2e-17 Score=148.53 Aligned_cols=179 Identities=18% Similarity=0.155 Sum_probs=133.8
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh-------cCCCceeeeccCCCHHHHHHHhc-------
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------FGTYVESMAGDASNKKFLKTALR------- 162 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~-------~~~~v~~v~~D~~d~~~l~~~~~------- 162 (306)
.++++++|||||++||.+++++|+++|++|+++.|+.+++.+. .+..++++.+|++|++.++++.+
T Consensus 4 ~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~~ 83 (265)
T COG0300 4 MKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERGG 83 (265)
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcCC
Confidence 4678999999999999999999999999999999999984432 33467899999999988877664
Q ss_pred CccEEEEcCC----c-h-------------------------hhhcccccCCCEEEEecCcccccCCCCcccccchHHHH
Q 021854 163 GVRSIICPSE----G-F-------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK 212 (306)
Q Consensus 163 ~~d~vi~~~~----g-~-------------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~ 212 (306)
.+|++|++++ + + +..-+.+.+-.++|.|+|.+++.+.+.+..|..+++.-
T Consensus 84 ~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag~~p~p~~avY~ATKa~v 163 (265)
T COG0300 84 PIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAAGLIPTPYMAVYSATKAFV 163 (265)
T ss_pred cccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechhhcCCCcchHHHHHHHHHH
Confidence 4799998744 1 1 11124456778999999999998888888887766533
Q ss_pred --HHHHHHHHHHhcCCCEEEEEcCcccCCCCCCcceeeecCCCCccccCHHHHHHHHHHHhhCCC
Q 021854 213 --LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIP 275 (306)
Q Consensus 213 --~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~~~~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~ 275 (306)
+.+.....|+..|+.++.|.||..........+...........+++++|||+..+.++...+
T Consensus 164 ~~fSeaL~~EL~~~gV~V~~v~PG~~~T~f~~~~~~~~~~~~~~~~~~~~~~va~~~~~~l~~~k 228 (265)
T COG0300 164 LSFSEALREELKGTGVKVTAVCPGPTRTEFFDAKGSDVYLLSPGELVLSPEDVAEAALKALEKGK 228 (265)
T ss_pred HHHHHHHHHHhcCCCeEEEEEecCccccccccccccccccccchhhccCHHHHHHHHHHHHhcCC
Confidence 344555557778999999999996644332111111122234568899999999999998654
|
|
| >KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=99.76 E-value=2.4e-17 Score=146.87 Aligned_cols=198 Identities=15% Similarity=0.130 Sum_probs=153.5
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhh---hhcC--CCceeeeccCCCHHHHHHHhcCccEEEEcCC-
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM---ESFG--TYVESMAGDASNKKFLKTALRGVRSIICPSE- 172 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~---~~~~--~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~- 172 (306)
+-.+-|+|||||+|+.++.+|++.|-+|++-.|..+--. ...+ .++-+...|+.|+++++++++..++||+..+
T Consensus 61 GiVaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~~r~lkvmGdLGQvl~~~fd~~DedSIr~vvk~sNVVINLIGr 140 (391)
T KOG2865|consen 61 GIVATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYDPRHLKVMGDLGQVLFMKFDLRDEDSIRAVVKHSNVVINLIGR 140 (391)
T ss_pred ceEEEEecccccccHHHHHHHhhcCCeEEEeccCCccchhheeecccccceeeeccCCCCHHHHHHHHHhCcEEEEeecc
Confidence 678889999999999999999999999999999775411 1123 2688899999999999999999999998732
Q ss_pred -----ch------------hhhcccccCCCEEEEecCcccccCCCCcccccchHHHHHHHHHHHHHHhcCCCEEEEEcCc
Q 021854 173 -----GF------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMASGIPYTIIRTGV 235 (306)
Q Consensus 173 -----g~------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~~~~~aE~~l~~sgi~~tiiRPg~ 235 (306)
.+ ++..|+++||.|||++|..++.- ..++...+.|...|..+++.-.+.|||||+.
T Consensus 141 d~eTknf~f~Dvn~~~aerlAricke~GVerfIhvS~Lganv-------~s~Sr~LrsK~~gE~aVrdafPeAtIirPa~ 213 (391)
T KOG2865|consen 141 DYETKNFSFEDVNVHIAERLARICKEAGVERFIHVSCLGANV-------KSPSRMLRSKAAGEEAVRDAFPEATIIRPAD 213 (391)
T ss_pred ccccCCcccccccchHHHHHHHHHHhhChhheeehhhccccc-------cChHHHHHhhhhhHHHHHhhCCcceeechhh
Confidence 11 56678999999999999987531 1223445557778999999999999999998
Q ss_pred ccCCCC-----------CCcceee-ecCC-CCccccCHHHHHHHHHHHhhCCCCCCcEEEEecCCc-CHHHHHHHHHHHh
Q 021854 236 LQNTPG-----------GKQGFQF-EEGC-AANGSLSKEDAAFICVEALESIPQTGLIFEVVNGEE-KVSDWKKCFSRLM 301 (306)
Q Consensus 236 l~~~~~-----------~~~~~~~-~~g~-~~~~~Is~~DVA~~iv~aL~~~~~~g~~~~v~~g~~-s~~d~~~l~~~l~ 301 (306)
+....+ ....+.+ ..|. +...++.+-|||++|+.++.+|.+.|++|+..++.. ...++.+++-.++
T Consensus 214 iyG~eDrfln~ya~~~rk~~~~pL~~~GekT~K~PVyV~DVaa~IvnAvkDp~s~Gktye~vGP~~yql~eLvd~my~~~ 293 (391)
T KOG2865|consen 214 IYGTEDRFLNYYASFWRKFGFLPLIGKGEKTVKQPVYVVDVAAAIVNAVKDPDSMGKTYEFVGPDRYQLSELVDIMYDMA 293 (391)
T ss_pred hcccchhHHHHHHHHHHhcCceeeecCCcceeeccEEEehHHHHHHHhccCccccCceeeecCCchhhHHHHHHHHHHHH
Confidence 664432 1111222 2222 236789999999999999999999999999997764 5678888887776
Q ss_pred hh
Q 021854 302 EK 303 (306)
Q Consensus 302 ~~ 303 (306)
.+
T Consensus 294 ~~ 295 (391)
T KOG2865|consen 294 RE 295 (391)
T ss_pred hh
Confidence 54
|
|
| >PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase | Back alignment and domain information |
|---|
Probab=99.76 E-value=3.9e-17 Score=150.10 Aligned_cols=186 Identities=12% Similarity=0.046 Sum_probs=129.1
Q ss_pred EEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcC--ccEEEEcCCc------h
Q 021854 103 LVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRG--VRSIICPSEG------F 174 (306)
Q Consensus 103 lVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~--~d~vi~~~~g------~ 174 (306)
|||||+|+||++++++|++.|++|+++.+.. .+|+.|.+.+.++++. +|+|||+++. .
T Consensus 1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~~--------------~~Dl~~~~~l~~~~~~~~~d~Vih~A~~~~~~~~~ 66 (306)
T PLN02725 1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTHK--------------ELDLTRQADVEAFFAKEKPTYVILAAAKVGGIHAN 66 (306)
T ss_pred CcccCCCcccHHHHHHHHhCCCcEEEeeccc--------------cCCCCCHHHHHHHHhccCCCEEEEeeeeecccchh
Confidence 6999999999999999999999887664321 4899999999998874 6999998321 0
Q ss_pred -----------------hhhcccccCCCEEEEecCcccccCCCC--cc-------cccc-h-HHHHHHHHHHH----HHH
Q 021854 175 -----------------ISNAGSLKGVQHVILLSQLSVYRGSGG--IQ-------ALMK-G-NARKLAEQDES----MLM 222 (306)
Q Consensus 175 -----------------~~~~a~~~gvkr~V~iSS~~~~~~~~~--~~-------~~~~-~-~a~~~~~~aE~----~l~ 222 (306)
+.+++++.++++||++||..+|.+... .. ...+ . .+...|..+|. +.+
T Consensus 67 ~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~e~~~~~~~~ 146 (306)
T PLN02725 67 MTYPADFIRENLQIQTNVIDAAYRHGVKKLLFLGSSCIYPKFAPQPIPETALLTGPPEPTNEWYAIAKIAGIKMCQAYRI 146 (306)
T ss_pred hhCcHHHHHHHhHHHHHHHHHHHHcCCCeEEEeCceeecCCCCCCCCCHHHhccCCCCCCcchHHHHHHHHHHHHHHHHH
Confidence 445677789999999999988753211 00 0001 0 12223434443 444
Q ss_pred hcCCCEEEEEcCcccCCCCC----------------------Cccee--eecCCCCccccCHHHHHHHHHHHhhCCCCCC
Q 021854 223 ASGIPYTIIRTGVLQNTPGG----------------------KQGFQ--FEEGCAANGSLSKEDAAFICVEALESIPQTG 278 (306)
Q Consensus 223 ~sgi~~tiiRPg~l~~~~~~----------------------~~~~~--~~~g~~~~~~Is~~DVA~~iv~aL~~~~~~g 278 (306)
..+++++++||+.+...... +..+. ++.+.....+++++|+|++++.+++... .+
T Consensus 147 ~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dv~~~~~~~~~~~~-~~ 225 (306)
T PLN02725 147 QYGWDAISGMPTNLYGPHDNFHPENSHVIPALIRRFHEAKANGAPEVVVWGSGSPLREFLHVDDLADAVVFLMRRYS-GA 225 (306)
T ss_pred HhCCCEEEEEecceeCCCCCCCCCCCcccHHHHHHHHHHhhcCCCeEEEcCCCCeeeccccHHHHHHHHHHHHhccc-cC
Confidence 57999999999985432110 11111 2345555789999999999999998653 34
Q ss_pred cEEEEecCC-cCHHHHHHHHHHHhhh
Q 021854 279 LIFEVVNGE-EKVSDWKKCFSRLMEK 303 (306)
Q Consensus 279 ~~~~v~~g~-~s~~d~~~l~~~l~~~ 303 (306)
..||++++. .++.|+.+++.++.+.
T Consensus 226 ~~~ni~~~~~~s~~e~~~~i~~~~~~ 251 (306)
T PLN02725 226 EHVNVGSGDEVTIKELAELVKEVVGF 251 (306)
T ss_pred cceEeCCCCcccHHHHHHHHHHHhCC
Confidence 578998765 5899999998887653
|
|
| >COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.76 E-value=9.7e-17 Score=144.01 Aligned_cols=202 Identities=18% Similarity=0.158 Sum_probs=146.3
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCe--EEEEec-----CcchhhhhcC-CCceeeeccCCCHHHHHHHhc--CccEEEE
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVKRTR--IKALVK-----DKRNAMESFG-TYVESMAGDASNKKFLKTALR--GVRSIIC 169 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~g~~--V~~l~R-----~~~~~~~~~~-~~v~~v~~D~~d~~~l~~~~~--~~d~vi~ 169 (306)
|++|||||+||||+.+++.+++...+ |+.+.. +.+.+..... ++..++++|+.|.+.+.++|+ ..|+|+|
T Consensus 1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~~~~~~~~fv~~DI~D~~~v~~~~~~~~~D~Vvh 80 (340)
T COG1088 1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVEDSPRYRFVQGDICDRELVDRLFKEYQPDAVVH 80 (340)
T ss_pred CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHhhhcCCCceEEeccccCHHHHHHHHHhcCCCeEEE
Confidence 68999999999999999999988754 454433 1122222333 489999999999999999998 4799998
Q ss_pred cCC-c---------------------hhhhcccccCCC-EEEEecCcccccC-------------CCCcccccchHHHHH
Q 021854 170 PSE-G---------------------FISNAGSLKGVQ-HVILLSQLSVYRG-------------SGGIQALMKGNARKL 213 (306)
Q Consensus 170 ~~~-g---------------------~~~~~a~~~gvk-r~V~iSS~~~~~~-------------~~~~~~~~~~~a~~~ 213 (306)
.++ . .+.+++++...+ ||++||+.-+|.. ..+..+|..+++...
T Consensus 81 fAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~frf~HISTDEVYG~l~~~~~~FtE~tp~~PsSPYSASKAasD 160 (340)
T COG1088 81 FAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGKFRFHHISTDEVYGDLGLDDDAFTETTPYNPSSPYSASKAASD 160 (340)
T ss_pred echhccccccccChhhhhhcchHHHHHHHHHHHHhcccceEEEeccccccccccCCCCCcccCCCCCCCCCcchhhhhHH
Confidence 733 1 156777777764 9999999988863 223345555544443
Q ss_pred HHHHHHHHHhcCCCEEEEEcCc-ccCC--C------------CCCcceeeecCCCCccccCHHHHHHHHHHHhhCCCCCC
Q 021854 214 AEQDESMLMASGIPYTIIRTGV-LQNT--P------------GGKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTG 278 (306)
Q Consensus 214 ~~~aE~~l~~sgi~~tiiRPg~-l~~~--~------------~~~~~~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~~~g 278 (306)
. .+..|.+..|++++|.|++. +.+. + .+...-.++.|.+.+.+++++|=++++-.+|+.... |
T Consensus 161 ~-lVray~~TYglp~~ItrcSNNYGPyqfpEKlIP~~I~nal~g~~lpvYGdG~~iRDWl~VeDh~~ai~~Vl~kg~~-G 238 (340)
T COG1088 161 L-LVRAYVRTYGLPATITRCSNNYGPYQFPEKLIPLMIINALLGKPLPVYGDGLQIRDWLYVEDHCRAIDLVLTKGKI-G 238 (340)
T ss_pred H-HHHHHHHHcCCceEEecCCCCcCCCcCchhhhHHHHHHHHcCCCCceecCCcceeeeEEeHhHHHHHHHHHhcCcC-C
Confidence 3 45566778999999999987 3211 1 122223356777789999999999999999987655 8
Q ss_pred cEEEEecCCc-CHHHHHHHHHHHhhh
Q 021854 279 LIFEVVNGEE-KVSDWKKCFSRLMEK 303 (306)
Q Consensus 279 ~~~~v~~g~~-s~~d~~~l~~~l~~~ 303 (306)
++||++++.. +-.++.+++-+++++
T Consensus 239 E~YNIgg~~E~~Nlevv~~i~~~l~~ 264 (340)
T COG1088 239 ETYNIGGGNERTNLEVVKTICELLGK 264 (340)
T ss_pred ceEEeCCCccchHHHHHHHHHHHhCc
Confidence 9999999764 666777777776654
|
|
| >TIGR01777 yfcH conserved hypothetical protein TIGR01777 | Back alignment and domain information |
|---|
Probab=99.75 E-value=4e-17 Score=148.81 Aligned_cols=196 Identities=17% Similarity=0.153 Sum_probs=126.3
Q ss_pred EEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcCCch-------
Q 021854 102 VLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEGF------- 174 (306)
Q Consensus 102 ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~g~------- 174 (306)
||||||+|+||++++++|++.|++|++++|+.++........ ..|+.. ..+...+.++|+|||+++..
T Consensus 1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~----~~~~~~-~~~~~~~~~~D~Vvh~a~~~~~~~~~~ 75 (292)
T TIGR01777 1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTKWEG----YKPWAP-LAESEALEGADAVINLAGEPIADKRWT 75 (292)
T ss_pred CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCccccee----eecccc-cchhhhcCCCCEEEECCCCCcccccCC
Confidence 699999999999999999999999999999987643221111 122322 45567788999999984310
Q ss_pred -----------------hhhcccccCCC--EEEEecCcccccCCCC--cc----cccchHHHHHHHHHHHH---HHhcCC
Q 021854 175 -----------------ISNAGSLKGVQ--HVILLSQLSVYRGSGG--IQ----ALMKGNARKLAEQDESM---LMASGI 226 (306)
Q Consensus 175 -----------------~~~~a~~~gvk--r~V~iSS~~~~~~~~~--~~----~~~~~~a~~~~~~aE~~---l~~sgi 226 (306)
+.+++++.+++ +||+.|+...|..... .. .+........+...|.. +++.++
T Consensus 76 ~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~i~~S~~~~yg~~~~~~~~E~~~~~~~~~~~~~~~~~e~~~~~~~~~~~ 155 (292)
T TIGR01777 76 EERKQEIRDSRIDTTRALVEAIAAAEQKPKVFISASAVGYYGTSEDRVFTEEDSPAGDDFLAELCRDWEEAAQAAEDLGT 155 (292)
T ss_pred HHHHHHHHhcccHHHHHHHHHHHhcCCCceEEEEeeeEEEeCCCCCCCcCcccCCCCCChHHHHHHHHHHHhhhchhcCC
Confidence 23456667764 4555566555542211 00 10000111122223333 344689
Q ss_pred CEEEEEcCcccCCCCC-----------CcceeeecCCCCccccCHHHHHHHHHHHhhCCCCCCcEEEEecCC-cCHHHHH
Q 021854 227 PYTIIRTGVLQNTPGG-----------KQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVVNGE-EKVSDWK 294 (306)
Q Consensus 227 ~~tiiRPg~l~~~~~~-----------~~~~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~~~g~~~~v~~g~-~s~~d~~ 294 (306)
+++++||+.+...... .....++.++...++|+++|+|+++..+++.+.. +.+|++++++ .++.|+.
T Consensus 156 ~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~i~v~Dva~~i~~~l~~~~~-~g~~~~~~~~~~s~~di~ 234 (292)
T TIGR01777 156 RVVLLRTGIVLGPKGGALAKMLPPFRLGLGGPLGSGRQWFSWIHIEDLVQLILFALENASI-SGPVNATAPEPVRNKEFA 234 (292)
T ss_pred ceEEEeeeeEECCCcchhHHHHHHHhcCcccccCCCCcccccEeHHHHHHHHHHHhcCccc-CCceEecCCCccCHHHHH
Confidence 9999999996532210 0111133455667899999999999999987654 3589998855 5899999
Q ss_pred HHHHHHhhh
Q 021854 295 KCFSRLMEK 303 (306)
Q Consensus 295 ~l~~~l~~~ 303 (306)
+.+.++.+.
T Consensus 235 ~~i~~~~g~ 243 (292)
T TIGR01777 235 KALARALHR 243 (292)
T ss_pred HHHHHHhCC
Confidence 999888764
|
This model represents a clade of proteins of unknown function including the E. coli yfcH protein. |
| >COG2910 Putative NADH-flavin reductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.75 E-value=8.6e-17 Score=135.08 Aligned_cols=181 Identities=14% Similarity=0.195 Sum_probs=131.6
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEc-CC---ch-
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP-SE---GF- 174 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~-~~---g~- 174 (306)
|+|.|.||||.+|++|++....+||+|++++|++++.... ..+.+++.|+.|.+++.+.+.+.|+||.+ .+ +.
T Consensus 1 mKIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~--~~~~i~q~Difd~~~~a~~l~g~DaVIsA~~~~~~~~~ 78 (211)
T COG2910 1 MKIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAAR--QGVTILQKDIFDLTSLASDLAGHDAVISAFGAGASDND 78 (211)
T ss_pred CeEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhcccc--ccceeecccccChhhhHhhhcCCceEEEeccCCCCChh
Confidence 6899999999999999999999999999999999997644 46889999999999999999999999987 22 21
Q ss_pred ---------hhhcccccCCCEEEEecCccccc---C-----CCCc-ccccchHHHHHHHHHHHHHHhcCCCEEEEEcCcc
Q 021854 175 ---------ISNAGSLKGVQHVILLSQLSVYR---G-----SGGI-QALMKGNARKLAEQDESMLMASGIPYTIIRTGVL 236 (306)
Q Consensus 175 ---------~~~~a~~~gvkr~V~iSS~~~~~---~-----~~~~-~~~~~~~a~~~~~~aE~~l~~sgi~~tiiRPg~l 236 (306)
+++..+.+++.|++.+...+... + .+.. ..|.+ .++...+..+.+-.+..++||.+.|..+
T Consensus 79 ~~~~k~~~~li~~l~~agv~RllVVGGAGSL~id~g~rLvD~p~fP~ey~~-~A~~~ae~L~~Lr~~~~l~WTfvSPaa~ 157 (211)
T COG2910 79 ELHSKSIEALIEALKGAGVPRLLVVGGAGSLEIDEGTRLVDTPDFPAEYKP-EALAQAEFLDSLRAEKSLDWTFVSPAAF 157 (211)
T ss_pred HHHHHHHHHHHHHHhhcCCeeEEEEcCccceEEcCCceeecCCCCchhHHH-HHHHHHHHHHHHhhccCcceEEeCcHHh
Confidence 45566778999999997655432 1 1111 12211 1222222222223346799999999986
Q ss_pred cCC-CCCCcceee-----ecCCCCccccCHHHHHHHHHHHhhCCCCCCcEEEEe
Q 021854 237 QNT-PGGKQGFQF-----EEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVV 284 (306)
Q Consensus 237 ~~~-~~~~~~~~~-----~~g~~~~~~Is~~DVA~~iv~aL~~~~~~g~~~~v~ 284 (306)
... ..+++ +.+ .......+.||++|-|-+++..++++.+.++.|.|.
T Consensus 158 f~PGerTg~-yrlggD~ll~n~~G~SrIS~aDYAiA~lDe~E~~~h~rqRftv~ 210 (211)
T COG2910 158 FEPGERTGN-YRLGGDQLLVNAKGESRISYADYAIAVLDELEKPQHIRQRFTVA 210 (211)
T ss_pred cCCccccCc-eEeccceEEEcCCCceeeeHHHHHHHHHHHHhcccccceeeeec
Confidence 543 22222 222 233344589999999999999999999988888764
|
|
| >PRK12429 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=6.4e-17 Score=144.83 Aligned_cols=189 Identities=17% Similarity=0.145 Sum_probs=130.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh------cCCCceeeeccCCCHHHHHHHhc-------Cc
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GV 164 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~~~-------~~ 164 (306)
.+++|+||||+|+||++++++|+++|++|+++.|++++.... .+.++.++.+|++|.+++.++++ ++
T Consensus 3 ~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 82 (258)
T PRK12429 3 KGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGGV 82 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 358999999999999999999999999999999988763321 23468889999999998877765 57
Q ss_pred cEEEEcCCch------------------------------hhhcccccCCCEEEEecCcccccCCCCcccccchHHHH--
Q 021854 165 RSIICPSEGF------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK-- 212 (306)
Q Consensus 165 d~vi~~~~g~------------------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~-- 212 (306)
|+|||+++.. +...+++.+.++||++||..++.+..+...|..+++..
T Consensus 83 d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~~k~a~~~ 162 (258)
T PRK12429 83 DILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQGGGRIINMASVHGLVGSAGKAAYVSAKHGLIG 162 (258)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCeEEEEEcchhhccCCCCcchhHHHHHHHHH
Confidence 9999984310 11223456789999999988777666666665443211
Q ss_pred HHHHHHHHHHhcCCCEEEEEcCcccCCCCCC--------cce--------eeecCCCCccccCHHHHHHHHHHHhhCCC-
Q 021854 213 LAEQDESMLMASGIPYTIIRTGVLQNTPGGK--------QGF--------QFEEGCAANGSLSKEDAAFICVEALESIP- 275 (306)
Q Consensus 213 ~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~--------~~~--------~~~~g~~~~~~Is~~DVA~~iv~aL~~~~- 275 (306)
+.+.....+...+++++++|||++....... ... .+........+++.+|+|+++..++.+..
T Consensus 163 ~~~~l~~~~~~~~i~v~~~~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~ 242 (258)
T PRK12429 163 LTKVVALEGATHGVTVNAICPGYVDTPLVRKQIPDLAKERGISEEEVLEDVLLPLVPQKRFTTVEEIADYALFLASFAAK 242 (258)
T ss_pred HHHHHHHHhcccCeEEEEEecCCCcchhhhhhhhhhccccCCChHHHHHHHHhccCCccccCCHHHHHHHHHHHcCcccc
Confidence 1111111233468999999999865321100 000 01112223568999999999999997643
Q ss_pred -CCCcEEEEecC
Q 021854 276 -QTGLIFEVVNG 286 (306)
Q Consensus 276 -~~g~~~~v~~g 286 (306)
..++.|++.+|
T Consensus 243 ~~~g~~~~~~~g 254 (258)
T PRK12429 243 GVTGQAWVVDGG 254 (258)
T ss_pred CccCCeEEeCCC
Confidence 34788988866
|
|
| >TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.3e-16 Score=147.25 Aligned_cols=199 Identities=13% Similarity=0.072 Sum_probs=132.5
Q ss_pred EEEEcCCChHHHHHHHHHHHCCC-eEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhc----CccEEEEcCCch--
Q 021854 102 VLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR----GVRSIICPSEGF-- 174 (306)
Q Consensus 102 ilVtGatG~iG~~l~~~L~~~g~-~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~----~~d~vi~~~~g~-- 174 (306)
||||||+|+||++++++|+++|+ +|+++.|...... ........+..|+.+.+.++.+.+ ++|+|||+++..
T Consensus 1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~-~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~D~vvh~A~~~~~ 79 (314)
T TIGR02197 1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGHK-FLNLADLVIADYIDKEDFLDRLEKGAFGKIEAIFHQGACSDT 79 (314)
T ss_pred CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCchh-hhhhhheeeeccCcchhHHHHHHhhccCCCCEEEECccccCc
Confidence 69999999999999999999998 7887766543211 111112356788888877777664 799999984310
Q ss_pred ------------------hhhcccccCCCEEEEecCcccccCCCCc-----ccc-cchHHHHHHHHHHHHHHh------c
Q 021854 175 ------------------ISNAGSLKGVQHVILLSQLSVYRGSGGI-----QAL-MKGNARKLAEQDESMLMA------S 224 (306)
Q Consensus 175 ------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~-----~~~-~~~~a~~~~~~aE~~l~~------s 224 (306)
+.+++.+.++ +||++||..+|...... ... ....+...|..+|.++++ .
T Consensus 80 ~~~~~~~~~~~n~~~~~~ll~~~~~~~~-~~v~~SS~~vy~~~~~~~~e~~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~ 158 (314)
T TIGR02197 80 TETDGEYMMENNYQYSKRLLDWCAEKGI-PFIYASSAATYGDGEAGFREGRELERPLNVYGYSKFLFDQYVRRRVLPEAL 158 (314)
T ss_pred cccchHHHHHHHHHHHHHHHHHHHHhCC-cEEEEccHHhcCCCCCCcccccCcCCCCCHHHHHHHHHHHHHHHHhHhhcc
Confidence 3455666776 79999998887532110 000 011223345566666553 3
Q ss_pred CCCEEEEEcCcccCCCCC------------------Ccceee-------ecCCCCccccCHHHHHHHHHHHhhCCCCCCc
Q 021854 225 GIPYTIIRTGVLQNTPGG------------------KQGFQF-------EEGCAANGSLSKEDAAFICVEALESIPQTGL 279 (306)
Q Consensus 225 gi~~tiiRPg~l~~~~~~------------------~~~~~~-------~~g~~~~~~Is~~DVA~~iv~aL~~~~~~g~ 279 (306)
+++++++||+.+...... +..+.+ +.|+...++++++|+|+++..++.. ..+.
T Consensus 159 ~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~~i~~~~~~--~~~~ 236 (314)
T TIGR02197 159 SAQVVGLRYFNVYGPREYHKGKMASVAFHLFNQIKAGGNVKLFKSSEGFKDGEQLRDFVYVKDVVDVNLWLLEN--GVSG 236 (314)
T ss_pred CCceEEEEEeeccCCCCCCCCCcccHHHHHHHHHhcCCCeEEecCccccCCCCceeeeEEHHHHHHHHHHHHhc--ccCc
Confidence 578999999885432210 011111 2344446899999999999999987 3456
Q ss_pred EEEEecCC-cCHHHHHHHHHHHhhhc
Q 021854 280 IFEVVNGE-EKVSDWKKCFSRLMEKT 304 (306)
Q Consensus 280 ~~~v~~g~-~s~~d~~~l~~~l~~~~ 304 (306)
+||+++++ .++.|+.+.+.++.+.+
T Consensus 237 ~yni~~~~~~s~~e~~~~i~~~~g~~ 262 (314)
T TIGR02197 237 IFNLGTGRARSFNDLADAVFKALGKD 262 (314)
T ss_pred eEEcCCCCCccHHHHHHHHHHHhCCC
Confidence 99999865 58999999998887643
|
This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370). |
| >PRK06182 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.7e-16 Score=144.09 Aligned_cols=189 Identities=12% Similarity=0.049 Sum_probs=126.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhc-------CccEEEEc
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR-------GVRSIICP 170 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~-------~~d~vi~~ 170 (306)
.+++++||||+|+||++++++|+++|++|+++.|+.+++.+....+++++.+|++|.++++++++ ++|++||+
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~li~~ 81 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLASLGVHPLSLDVTDEASIKAAVDTIIAEEGRIDVLVNN 81 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEEC
Confidence 36899999999999999999999999999999999887655444568899999999999888776 67999998
Q ss_pred CCch------------------------------hhhcccccCCCEEEEecCcccccCCCCcccccchHHHH--HHHHHH
Q 021854 171 SEGF------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK--LAEQDE 218 (306)
Q Consensus 171 ~~g~------------------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~--~~~~aE 218 (306)
++.. +...+++.+.+++|++||..+..+......|..+++.. +.+...
T Consensus 82 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaa~~~~~~~l~ 161 (273)
T PRK06182 82 AGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQRSGRIINISSMGGKIYTPLGAWYHATKFALEGFSDALR 161 (273)
T ss_pred CCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhcCCCCCccHhHHHHHHHHHHHHHHH
Confidence 4310 11223456778999999987655444444454433221 111112
Q ss_pred HHHHhcCCCEEEEEcCcccCCCCC--Cccee------------------eecCCCCccccCHHHHHHHHHHHhhCCCCCC
Q 021854 219 SMLMASGIPYTIIRTGVLQNTPGG--KQGFQ------------------FEEGCAANGSLSKEDAAFICVEALESIPQTG 278 (306)
Q Consensus 219 ~~l~~sgi~~tiiRPg~l~~~~~~--~~~~~------------------~~~g~~~~~~Is~~DVA~~iv~aL~~~~~~g 278 (306)
..+...++++++||||++...... ...+. +..........+++|+|++++.++..... .
T Consensus 162 ~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vA~~i~~~~~~~~~-~ 240 (273)
T PRK06182 162 LEVAPFGIDVVVIEPGGIKTEWGDIAADHLLKTSGNGAYAEQAQAVAASMRSTYGSGRLSDPSVIADAISKAVTARRP-K 240 (273)
T ss_pred HHhcccCCEEEEEecCCcccccchhhhhhhcccccccchHHHHHHHHHHHHHhhccccCCCHHHHHHHHHHHHhCCCC-C
Confidence 224457999999999987533210 00000 00000112356889999999999985432 3
Q ss_pred cEEEEecCC
Q 021854 279 LIFEVVNGE 287 (306)
Q Consensus 279 ~~~~v~~g~ 287 (306)
..|.+..+.
T Consensus 241 ~~~~~g~~~ 249 (273)
T PRK06182 241 TRYAVGFGA 249 (273)
T ss_pred ceeecCcch
Confidence 356655443
|
|
| >PRK06482 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=2.2e-16 Score=143.49 Aligned_cols=189 Identities=11% Similarity=0.104 Sum_probs=124.9
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhh---hcCCCceeeeccCCCHHHHHHHhc-------CccEEE
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALR-------GVRSII 168 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~---~~~~~v~~v~~D~~d~~~l~~~~~-------~~d~vi 168 (306)
.+++|||||+|+||++++++|+++|++|+++.|+.+.... ..+.++.++.+|++|.+++.++++ ++|+||
T Consensus 2 ~k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi 81 (276)
T PRK06482 2 SKTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAALGRIDVVV 81 (276)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 5789999999999999999999999999999999866432 234578899999999988877664 479999
Q ss_pred EcCCch--------------------------hhhc----ccccCCCEEEEecCcccccCCCCcccccchHHHHH--HHH
Q 021854 169 CPSEGF--------------------------ISNA----GSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKL--AEQ 216 (306)
Q Consensus 169 ~~~~g~--------------------------~~~~----a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~~--~~~ 216 (306)
|+++.. +.++ +++.+.++||++||..+..+......|..+++... .+.
T Consensus 82 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~ 161 (276)
T PRK06482 82 SNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQVSSEGGQIAYPGFSLYHATKWGIEGFVEA 161 (276)
T ss_pred ECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcCcccccCCCCCchhHHHHHHHHHHHHH
Confidence 984310 1122 24567789999999877655545555644332211 111
Q ss_pred HHHHHHhcCCCEEEEEcCcccCCCCCC----cceeee------------cCCCCccccCHHHHHHHHHHHhhCCCCCCcE
Q 021854 217 DESMLMASGIPYTIIRTGVLQNTPGGK----QGFQFE------------EGCAANGSLSKEDAAFICVEALESIPQTGLI 280 (306)
Q Consensus 217 aE~~l~~sgi~~tiiRPg~l~~~~~~~----~~~~~~------------~g~~~~~~Is~~DVA~~iv~aL~~~~~~g~~ 280 (306)
....+...+++++++|||.+....... ...... ......-..+++|++++++.++..+.. +..
T Consensus 162 l~~~~~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~a~~~~~~~~~~-~~~ 240 (276)
T PRK06482 162 VAQEVAPFGIEFTIVEPGPARTNFGAGLDRGAPLDAYDDTPVGDLRRALADGSFAIPGDPQKMVQAMIASADQTPA-PRR 240 (276)
T ss_pred HHHHhhccCcEEEEEeCCccccCCcccccccCCCccccchhhHHHHHHHhhccCCCCCCHHHHHHHHHHHHcCCCC-CeE
Confidence 112223469999999999853222110 000000 000011135789999999999976543 456
Q ss_pred EEEecCCc
Q 021854 281 FEVVNGEE 288 (306)
Q Consensus 281 ~~v~~g~~ 288 (306)
|++++++.
T Consensus 241 ~~~g~~~~ 248 (276)
T PRK06482 241 LTLGSDAY 248 (276)
T ss_pred EecChHHH
Confidence 98888764
|
|
| >PRK08263 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=7.1e-17 Score=146.86 Aligned_cols=199 Identities=13% Similarity=0.138 Sum_probs=130.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhh---hcCCCceeeeccCCCHHHHHHHhc-------CccEE
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALR-------GVRSI 167 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~---~~~~~v~~v~~D~~d~~~l~~~~~-------~~d~v 167 (306)
++++|+||||+|+||++++++|+++|++|++++|+.++..+ ..+..+.++.+|++|.+++..+++ ++|++
T Consensus 2 ~~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~v 81 (275)
T PRK08263 2 MEKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHFGRLDIV 81 (275)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 46799999999999999999999999999999999876432 234467888999999988877654 56999
Q ss_pred EEcCCch--------------------------hhh----cccccCCCEEEEecCcccccCCCCcccccchHHHH--HHH
Q 021854 168 ICPSEGF--------------------------ISN----AGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK--LAE 215 (306)
Q Consensus 168 i~~~~g~--------------------------~~~----~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~--~~~ 215 (306)
||+++.. +.+ .+++.+.+++|++||..++.+......|..+++.. +.+
T Consensus 82 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sKaa~~~~~~ 161 (275)
T PRK08263 82 VNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQRSGHIIQISSIGGISAFPMSGIYHASKWALEGMSE 161 (275)
T ss_pred EECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhcCCCCCccHHHHHHHHHHHHHH
Confidence 9984310 111 13456778999999988877666655665443321 112
Q ss_pred HHHHHHHhcCCCEEEEEcCcccCCCCC-C----ccee--------eecCCCCccc-cCHHHHHHHHHHHhhCCCCCCcEE
Q 021854 216 QDESMLMASGIPYTIIRTGVLQNTPGG-K----QGFQ--------FEEGCAANGS-LSKEDAAFICVEALESIPQTGLIF 281 (306)
Q Consensus 216 ~aE~~l~~sgi~~tiiRPg~l~~~~~~-~----~~~~--------~~~g~~~~~~-Is~~DVA~~iv~aL~~~~~~g~~~ 281 (306)
.....+...|++++++|||.+...... . .... +........+ ++++|+|++++.+++.+...++.+
T Consensus 162 ~la~e~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~dva~~~~~l~~~~~~~~~~~ 241 (275)
T PRK08263 162 ALAQEVAEFGIKVTLVEPGGYSTDWAGTSAKRATPLDAYDTLREELAEQWSERSVDGDPEAAAEALLKLVDAENPPLRLF 241 (275)
T ss_pred HHHHHhhhhCcEEEEEecCCccCCccccccccCCCchhhhhHHHHHHHHHHhccCCCCHHHHHHHHHHHHcCCCCCeEEE
Confidence 222224457999999999986432210 0 0000 0011112234 889999999999998776666544
Q ss_pred EEecCC--cCHHHHHHHH
Q 021854 282 EVVNGE--EKVSDWKKCF 297 (306)
Q Consensus 282 ~v~~g~--~s~~d~~~l~ 297 (306)
+.+++ .+..++.+.+
T Consensus 242 -~~~~~~~~~~~~~~~~~ 258 (275)
T PRK08263 242 -LGSGVLDLAKADYERRL 258 (275)
T ss_pred -eCchHHHHHHHHHHHHH
Confidence 44343 2344444433
|
|
| >PRK12828 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=2.6e-16 Score=139.03 Aligned_cols=186 Identities=15% Similarity=0.176 Sum_probs=129.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhh----hcCCCceeeeccCCCHHHHHHHhc-------CccE
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME----SFGTYVESMAGDASNKKFLKTALR-------GVRS 166 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~----~~~~~v~~v~~D~~d~~~l~~~~~-------~~d~ 166 (306)
+++++|||||+|+||+.++++|+++|++|+++.|+.++..+ .....++.+.+|+.|.+++..+++ ++|+
T Consensus 6 ~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~ 85 (239)
T PRK12828 6 QGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADALRIGGIDLVDPQAARRAVDEVNRQFGRLDA 85 (239)
T ss_pred CCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhcCceEEEeecCCHHHHHHHHHHHHHHhCCcCE
Confidence 46899999999999999999999999999999998765322 222457788999999888877665 5799
Q ss_pred EEEcCCch--------------------------hhhc----ccccCCCEEEEecCcccccCCCCcccccchHHHH--HH
Q 021854 167 IICPSEGF--------------------------ISNA----GSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK--LA 214 (306)
Q Consensus 167 vi~~~~g~--------------------------~~~~----a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~--~~ 214 (306)
|||+++.. +.++ +.+.++++||++||..++.+..+...|...++.. +.
T Consensus 86 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~~sk~a~~~~~ 165 (239)
T PRK12828 86 LVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGAGAALKAGPGMGAYAAAKAGVARLT 165 (239)
T ss_pred EEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECchHhccCCCCcchhHHHHHHHHHHH
Confidence 99974311 1111 2345789999999998877665555564433211 11
Q ss_pred HHHHHHHHhcCCCEEEEEcCcccCCCCCCcceeeecCCCCccccCHHHHHHHHHHHhhCCC--CCCcEEEEecCC
Q 021854 215 EQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVNGE 287 (306)
Q Consensus 215 ~~aE~~l~~sgi~~tiiRPg~l~~~~~~~~~~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~~~v~~g~ 287 (306)
+.....+...+++++++|||++...... .. . .......+++++|+|+++..++.+.. ..|+.+.+.++.
T Consensus 166 ~~~a~~~~~~~i~~~~i~pg~v~~~~~~-~~--~-~~~~~~~~~~~~dva~~~~~~l~~~~~~~~g~~~~~~g~~ 236 (239)
T PRK12828 166 EALAAELLDRGITVNAVLPSIIDTPPNR-AD--M-PDADFSRWVTPEQIAAVIAFLLSDEAQAITGASIPVDGGV 236 (239)
T ss_pred HHHHHHhhhcCeEEEEEecCcccCcchh-hc--C-CchhhhcCCCHHHHHHHHHHHhCcccccccceEEEecCCE
Confidence 2222234457899999999987643211 11 1 11112347899999999999997653 357888888765
|
|
| >KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.4e-16 Score=150.56 Aligned_cols=202 Identities=25% Similarity=0.322 Sum_probs=138.7
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcC-----CCceeeeccCCCHH-HHHHHhcC----cc
Q 021854 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG-----TYVESMAGDASNKK-FLKTALRG----VR 165 (306)
Q Consensus 96 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~-----~~v~~v~~D~~d~~-~l~~~~~~----~d 165 (306)
....+.|+|+||||.+|+.++++|+++|+.|++++|+.++....++ .....+..|..... .+...... ..
T Consensus 76 ~~~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~~~~~d~~~~~v~~~~~~~~d~~~~~~~~~~~~~~ 155 (411)
T KOG1203|consen 76 SKKPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLGVFFVDLGLQNVEADVVTAIDILKKLVEAVPKGVV 155 (411)
T ss_pred CCCCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhcccccccccceeeeccccccchhhhhhhhccccce
Confidence 3456899999999999999999999999999999999988766544 12333334433322 22333332 23
Q ss_pred EEEEcCCc---h----------------hhhcccccCCCEEEEecCcccccCCCCccccc-chHHHHHHHHHHHHHHhcC
Q 021854 166 SIICPSEG---F----------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALM-KGNARKLAEQDESMLMASG 225 (306)
Q Consensus 166 ~vi~~~~g---~----------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~-~~~a~~~~~~aE~~l~~sg 225 (306)
+++.+.++ . ++++|+.+|++|||++|+.+......+.+.+. ......+++.+|.++++++
T Consensus 156 ~v~~~~ggrp~~ed~~~p~~VD~~g~knlvdA~~~aGvk~~vlv~si~~~~~~~~~~~~~~~~~~~~~k~~~e~~~~~Sg 235 (411)
T KOG1203|consen 156 IVIKGAGGRPEEEDIVTPEKVDYEGTKNLVDACKKAGVKRVVLVGSIGGTKFNQPPNILLLNGLVLKAKLKAEKFLQDSG 235 (411)
T ss_pred eEEecccCCCCcccCCCcceecHHHHHHHHHHHHHhCCceEEEEEeecCcccCCCchhhhhhhhhhHHHHhHHHHHHhcC
Confidence 55544221 1 56788999999999999998876555555444 4456778889999999999
Q ss_pred CCEEEEEcCcccCCCCCCcceee------ecCCCCccccCHHHHHHHHHHHhhCCCCCC-cEEEEecCCc----CHHHHH
Q 021854 226 IPYTIIRTGVLQNTPGGKQGFQF------EEGCAANGSLSKEDAAFICVEALESIPQTG-LIFEVVNGEE----KVSDWK 294 (306)
Q Consensus 226 i~~tiiRPg~l~~~~~~~~~~~~------~~g~~~~~~Is~~DVA~~iv~aL~~~~~~g-~~~~v~~g~~----s~~d~~ 294 (306)
++|+||||+.+....+....... ..++.....+++.|+|+.++.++.++...+ ++.++...+. ++.+|.
T Consensus 236 l~ytiIR~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~vael~~~all~~~~~~~k~~~~v~~~~gpg~~~~~l~ 315 (411)
T KOG1203|consen 236 LPYTIIRPGGLEQDTGGQREVVVDDEKELLTVDGGAYSISRLDVAELVAKALLNEAATFKKVVELVLKPEGPGRPYKVLL 315 (411)
T ss_pred CCcEEEeccccccCCCCcceecccCccccccccccceeeehhhHHHHHHHHHhhhhhccceeEEeecCCCCCCccHHHHH
Confidence 99999999997754433222211 122222348999999999999999887665 4555554332 345555
Q ss_pred HHH
Q 021854 295 KCF 297 (306)
Q Consensus 295 ~l~ 297 (306)
+++
T Consensus 316 ~~~ 318 (411)
T KOG1203|consen 316 ELF 318 (411)
T ss_pred hhc
Confidence 444
|
|
| >PRK07825 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.5e-16 Score=144.35 Aligned_cols=174 Identities=14% Similarity=0.128 Sum_probs=125.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcC--CCceeeeccCCCHHHHHHHhc-------CccEEE
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG--TYVESMAGDASNKKFLKTALR-------GVRSII 168 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~--~~v~~v~~D~~d~~~l~~~~~-------~~d~vi 168 (306)
.+++|+||||+|+||++++++|+++|++|+++.|+.++..+... ..+.++.+|++|+++++++++ ++|++|
T Consensus 4 ~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li 83 (273)
T PRK07825 4 RGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELGLVVGGPLDVTDPASFAAFLDAVEADLGPIDVLV 83 (273)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 46899999999999999999999999999999999877543221 257889999999988766553 569999
Q ss_pred EcCCch------------------------------hhhcccccCCCEEEEecCcccccCCCCcccccchHHH--HHHHH
Q 021854 169 CPSEGF------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--KLAEQ 216 (306)
Q Consensus 169 ~~~~g~------------------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~--~~~~~ 216 (306)
|+++.. +...+.+.+.++||++||..+..+..+...|..+++. .+.+.
T Consensus 84 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~ 163 (273)
T PRK07825 84 NNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGRGHVVNVASLAGKIPVPGMATYCASKHAVVGFTDA 163 (273)
T ss_pred ECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCccccCCCCCCcchHHHHHHHHHHHHH
Confidence 984310 1122345677899999999887776666677655432 22233
Q ss_pred HHHHHHhcCCCEEEEEcCcccCCCCCCcceeeecCCCCccccCHHHHHHHHHHHhhCCCC
Q 021854 217 DESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQ 276 (306)
Q Consensus 217 aE~~l~~sgi~~tiiRPg~l~~~~~~~~~~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~~ 276 (306)
....+...++++++|+||++........ .+......++++|+|+.++.++.++..
T Consensus 164 l~~el~~~gi~v~~v~Pg~v~t~~~~~~-----~~~~~~~~~~~~~va~~~~~~l~~~~~ 218 (273)
T PRK07825 164 ARLELRGTGVHVSVVLPSFVNTELIAGT-----GGAKGFKNVEPEDVAAAIVGTVAKPRP 218 (273)
T ss_pred HHHHhhccCcEEEEEeCCcCcchhhccc-----ccccCCCCCCHHHHHHHHHHHHhCCCC
Confidence 3444667899999999998654322111 111223578999999999999987643
|
|
| >PRK05875 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=2.7e-16 Score=142.76 Aligned_cols=207 Identities=14% Similarity=0.131 Sum_probs=134.6
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh---c-----CCCceeeeccCCCHHHHHHHhc------
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---F-----GTYVESMAGDASNKKFLKTALR------ 162 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~---~-----~~~v~~v~~D~~d~~~l~~~~~------ 162 (306)
..+++++||||+|+||++++++|+++|++|+++.|+.++.... . +.++.++.+|+.|.+++.++++
T Consensus 5 ~~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 84 (276)
T PRK05875 5 FQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAWH 84 (276)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 3469999999999999999999999999999999987653211 1 2367888999999988887766
Q ss_pred -CccEEEEcCCc-----h----------------------hhhc----ccccCCCEEEEecCcccccCCCCcccccchHH
Q 021854 163 -GVRSIICPSEG-----F----------------------ISNA----GSLKGVQHVILLSQLSVYRGSGGIQALMKGNA 210 (306)
Q Consensus 163 -~~d~vi~~~~g-----~----------------------~~~~----a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a 210 (306)
.+|++||+++. . +... ..+.+.++||++||..++.+......|..+++
T Consensus 85 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sK~ 164 (276)
T PRK05875 85 GRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAASNTHRWFGAYGVTKS 164 (276)
T ss_pred CCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcCCCCCCcchHHHHH
Confidence 57999998431 0 0111 11234568999999988766555556654432
Q ss_pred HHH--HHHHHHHHHhcCCCEEEEEcCcccCCCCCCc----ce--eeecCCCCccccCHHHHHHHHHHHhhCCCC--CCcE
Q 021854 211 RKL--AEQDESMLMASGIPYTIIRTGVLQNTPGGKQ----GF--QFEEGCAANGSLSKEDAAFICVEALESIPQ--TGLI 280 (306)
Q Consensus 211 ~~~--~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~~----~~--~~~~g~~~~~~Is~~DVA~~iv~aL~~~~~--~g~~ 280 (306)
... .+.....+..+++++++||||++........ .. .+........+++++|+|+++++++.++.. .+++
T Consensus 165 a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~ 244 (276)
T PRK05875 165 AVDHLMKLAADELGPSWVRVNSIRPGLIRTDLVAPITESPELSADYRACTPLPRVGEVEDVANLAMFLLSDAASWITGQV 244 (276)
T ss_pred HHHHHHHHHHHHhcccCeEEEEEecCccCCccccccccCHHHHHHHHcCCCCCCCcCHHHHHHHHHHHcCchhcCcCCCE
Confidence 211 1111122334689999999998643221100 00 000111123456889999999999987653 4889
Q ss_pred EEEecCCcC--HHHHHHHHHHHhhh
Q 021854 281 FEVVNGEEK--VSDWKKCFSRLMEK 303 (306)
Q Consensus 281 ~~v~~g~~s--~~d~~~l~~~l~~~ 303 (306)
+++.++... ..++.+++..+.+.
T Consensus 245 ~~~~~g~~~~~~~~~~~~~~~~~~~ 269 (276)
T PRK05875 245 INVDGGHMLRRGPDFSSMLEPVFGA 269 (276)
T ss_pred EEECCCeeccCCccHHHHHHHHhhH
Confidence 999987641 23555555554443
|
|
| >PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed | Back alignment and domain information |
|---|
Probab=99.73 E-value=2.4e-16 Score=140.44 Aligned_cols=191 Identities=17% Similarity=0.158 Sum_probs=128.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh------cCCCceeeeccCCCHHHHHHHhc-------Cc
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GV 164 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~~~-------~~ 164 (306)
++++|+||||+|++|++++++|+++|++|++++|+.++.... .+.++.++.+|+.|.+++.++++ .+
T Consensus 5 ~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 84 (251)
T PRK12826 5 EGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFGRL 84 (251)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 578999999999999999999999999999999997543211 12358889999999998888775 57
Q ss_pred cEEEEcCCch--------------------------hhhc----ccccCCCEEEEecCcccc-cCCCCcccccchHHH--
Q 021854 165 RSIICPSEGF--------------------------ISNA----GSLKGVQHVILLSQLSVY-RGSGGIQALMKGNAR-- 211 (306)
Q Consensus 165 d~vi~~~~g~--------------------------~~~~----a~~~gvkr~V~iSS~~~~-~~~~~~~~~~~~~a~-- 211 (306)
|+|||+++.. +.+. +.+.+.++||++||..++ .+......|..+++.
T Consensus 85 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~ss~~~~~~~~~~~~~y~~sK~a~~ 164 (251)
T PRK12826 85 DILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGGGRIVLTSSVAGPRVGYPGLAHYAASKAGLV 164 (251)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechHhhccCCCCccHHHHHHHHHH
Confidence 9999984311 1111 234567899999998876 443444445433221
Q ss_pred HHHHHHHHHHHhcCCCEEEEEcCcccCCCCCCc-c-e---eeecCCCCccccCHHHHHHHHHHHhhCCC--CCCcEEEEe
Q 021854 212 KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQ-G-F---QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVV 284 (306)
Q Consensus 212 ~~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~~-~-~---~~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~~~v~ 284 (306)
.+.+.....+...+++++++|||.+........ . . .+........+++.+|+|++++.++..+. ..|++|++.
T Consensus 165 ~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~ 244 (251)
T PRK12826 165 GFTRALALELAARNITVNSVHPGGVDTPMAGNLGDAQWAEAIAAAIPLGRLGEPEDIAAAVLFLASDEARYITGQTLPVD 244 (251)
T ss_pred HHHHHHHHHHHHcCeEEEEEeeCCCCcchhhhcCchHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCcCCcEEEEC
Confidence 111222233445689999999999754321110 0 0 01111122357899999999999886543 358999998
Q ss_pred cCCc
Q 021854 285 NGEE 288 (306)
Q Consensus 285 ~g~~ 288 (306)
+|..
T Consensus 245 ~g~~ 248 (251)
T PRK12826 245 GGAT 248 (251)
T ss_pred CCcc
Confidence 7764
|
|
| >PRK13394 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=2.1e-16 Score=141.93 Aligned_cols=189 Identities=15% Similarity=0.085 Sum_probs=128.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhh------hcCCCceeeeccCCCHHHHHHHhcC-------c
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTALRG-------V 164 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~------~~~~~v~~v~~D~~d~~~l~~~~~~-------~ 164 (306)
++++++||||+|+||++++++|+++|++|+++.|++++..+ ..+..+.++.+|++|.++++++++. +
T Consensus 6 ~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 85 (262)
T PRK13394 6 NGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFGSV 85 (262)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 47899999999999999999999999999999998865322 1234577899999999988777653 7
Q ss_pred cEEEEcCCch------------------------------hhhcc-cccCCCEEEEecCcccccCCCCcccccchHHHH-
Q 021854 165 RSIICPSEGF------------------------------ISNAG-SLKGVQHVILLSQLSVYRGSGGIQALMKGNARK- 212 (306)
Q Consensus 165 d~vi~~~~g~------------------------------~~~~a-~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~- 212 (306)
|+|||+++.. +.+.+ +..+.++||++||..+..+......|..+++..
T Consensus 86 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~~~iv~~ss~~~~~~~~~~~~y~~sk~a~~ 165 (262)
T PRK13394 86 DILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHEASPLKSAYVTAKHGLL 165 (262)
T ss_pred CEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcCCcEEEEEcchhhcCCCCCCcccHHHHHHHH
Confidence 9999984310 12223 556789999999987766555555565443321
Q ss_pred -HHHHHHHHHHhcCCCEEEEEcCcccCCCCC----C--c--ce--------eeecCCCCccccCHHHHHHHHHHHhhCCC
Q 021854 213 -LAEQDESMLMASGIPYTIIRTGVLQNTPGG----K--Q--GF--------QFEEGCAANGSLSKEDAAFICVEALESIP 275 (306)
Q Consensus 213 -~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~----~--~--~~--------~~~~g~~~~~~Is~~DVA~~iv~aL~~~~ 275 (306)
+.+.....+...++++++||||.+...... . . .. .+..+.....+++++|+|+++..++..+.
T Consensus 166 ~~~~~la~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~~~l~~~~~ 245 (262)
T PRK13394 166 GLARVLAKEGAKHNVRSHVVCPGFVRTPLVDKQIPEQAKELGISEEEVVKKVMLGKTVDGVFTTVEDVAQTVLFLSSFPS 245 (262)
T ss_pred HHHHHHHHHhhhcCeEEEEEeeCcccchhhhhhhHhhhhccCCChHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHcCccc
Confidence 111111112346899999999985432110 0 0 00 01122334568999999999999997653
Q ss_pred --CCCcEEEEecC
Q 021854 276 --QTGLIFEVVNG 286 (306)
Q Consensus 276 --~~g~~~~v~~g 286 (306)
..|+.|++.+|
T Consensus 246 ~~~~g~~~~~~~g 258 (262)
T PRK13394 246 AALTGQSFVVSHG 258 (262)
T ss_pred cCCcCCEEeeCCc
Confidence 34788888866
|
|
| >PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1 | Back alignment and domain information |
|---|
Probab=99.73 E-value=4.6e-17 Score=149.68 Aligned_cols=187 Identities=14% Similarity=0.128 Sum_probs=129.2
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcC--ccEEEEcCCc----
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRG--VRSIICPSEG---- 173 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~--~d~vi~~~~g---- 173 (306)
|+||||||+|+||+++.++|...|++|+.+.|. ..|+.|.+.+.+.++. .|+|||+++-
T Consensus 1 MriLI~GasG~lG~~l~~~l~~~~~~v~~~~r~---------------~~dl~d~~~~~~~~~~~~pd~Vin~aa~~~~~ 65 (286)
T PF04321_consen 1 MRILITGASGFLGSALARALKERGYEVIATSRS---------------DLDLTDPEAVAKLLEAFKPDVVINCAAYTNVD 65 (286)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTTSEEEEEESTT---------------CS-TTSHHHHHHHHHHH--SEEEE------HH
T ss_pred CEEEEECCCCHHHHHHHHHHhhCCCEEEEeCch---------------hcCCCCHHHHHHHHHHhCCCeEeccceeecHH
Confidence 689999999999999999999999999999777 4789999999998875 6999998441
Q ss_pred ------------------hhhhcccccCCCEEEEecCcccccCCCCc------ccccchHHHHHHHHHHHHHHhcCCCEE
Q 021854 174 ------------------FISNAGSLKGVQHVILLSQLSVYRGSGGI------QALMKGNARKLAEQDESMLMASGIPYT 229 (306)
Q Consensus 174 ------------------~~~~~a~~~gvkr~V~iSS~~~~~~~~~~------~~~~~~~a~~~~~~aE~~l~~sgi~~t 229 (306)
.++++|.+.++ ++||+||..++.+.... .....+.+...|.++|+.+++..-+++
T Consensus 66 ~ce~~p~~a~~iN~~~~~~la~~~~~~~~-~li~~STd~VFdG~~~~~y~E~d~~~P~~~YG~~K~~~E~~v~~~~~~~~ 144 (286)
T PF04321_consen 66 ACEKNPEEAYAINVDATKNLAEACKERGA-RLIHISTDYVFDGDKGGPYTEDDPPNPLNVYGRSKLEGEQAVRAACPNAL 144 (286)
T ss_dssp HHHHSHHHHHHHHTHHHHHHHHHHHHCT--EEEEEEEGGGS-SSTSSSB-TTS----SSHHHHHHHHHHHHHHHH-SSEE
T ss_pred hhhhChhhhHHHhhHHHHHHHHHHHHcCC-cEEEeeccEEEcCCcccccccCCCCCCCCHHHHHHHHHHHHHHHhcCCEE
Confidence 13455666776 89999999988654221 011112455667889999998767999
Q ss_pred EEEcCcccCCCC------------CCcceeeecCCCCccccCHHHHHHHHHHHhhCCCC---CCcEEEEecCC-cCHHHH
Q 021854 230 IIRTGVLQNTPG------------GKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQ---TGLIFEVVNGE-EKVSDW 293 (306)
Q Consensus 230 iiRPg~l~~~~~------------~~~~~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~~---~g~~~~v~~g~-~s~~d~ 293 (306)
|+|++++..... .+..+.. ..+....+++.+|+|+++..++++... ...+||+++.+ .+..|+
T Consensus 145 IlR~~~~~g~~~~~~~~~~~~~~~~~~~i~~-~~d~~~~p~~~~dlA~~i~~l~~~~~~~~~~~Giyh~~~~~~~S~~e~ 223 (286)
T PF04321_consen 145 ILRTSWVYGPSGRNFLRWLLRRLRQGEPIKL-FDDQYRSPTYVDDLARVILELIEKNLSGASPWGIYHLSGPERVSRYEF 223 (286)
T ss_dssp EEEE-SEESSSSSSHHHHHHHHHHCTSEEEE-ESSCEE--EEHHHHHHHHHHHHHHHHH-GGG-EEEE---BS-EEHHHH
T ss_pred EEecceecccCCCchhhhHHHHHhcCCeeEe-eCCceeCCEEHHHHHHHHHHHHHhcccccccceeEEEecCcccCHHHH
Confidence 999999654421 1222222 445557889999999999999986532 35699999966 588888
Q ss_pred HHHHHHHhhh
Q 021854 294 KKCFSRLMEK 303 (306)
Q Consensus 294 ~~l~~~l~~~ 303 (306)
.+.+.+..+.
T Consensus 224 ~~~i~~~~~~ 233 (286)
T PF04321_consen 224 AEAIAKILGL 233 (286)
T ss_dssp HHHHHHHHTH
T ss_pred HHHHHHHhCC
Confidence 8888877654
|
1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. |
| >COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.73 E-value=2.8e-16 Score=142.24 Aligned_cols=184 Identities=17% Similarity=0.153 Sum_probs=137.4
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCc--cEEEEcCCch---
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGV--RSIICPSEGF--- 174 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~--d~vi~~~~g~--- 174 (306)
|+|||||++|.+|.+|+++|. .+++|+++.|.. .|++|++.+.++++.. |+|||+++-+
T Consensus 1 M~iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~~---------------~Ditd~~~v~~~i~~~~PDvVIn~AAyt~vD 64 (281)
T COG1091 1 MKILITGANGQLGTELRRALP-GEFEVIATDRAE---------------LDITDPDAVLEVIRETRPDVVINAAAYTAVD 64 (281)
T ss_pred CcEEEEcCCChHHHHHHHHhC-CCceEEeccCcc---------------ccccChHHHHHHHHhhCCCEEEECccccccc
Confidence 349999999999999999998 779999998776 8999999999999865 9999984411
Q ss_pred -------------------hhhcccccCCCEEEEecCcccccCCCCc-c----cccc-hHHHHHHHHHHHHHHhcCCCEE
Q 021854 175 -------------------ISNAGSLKGVQHVILLSQLSVYRGSGGI-Q----ALMK-GNARKLAEQDESMLMASGIPYT 229 (306)
Q Consensus 175 -------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~-~----~~~~-~~a~~~~~~aE~~l~~sgi~~t 229 (306)
++++|.+.|. ++|++||..++++..+. + ...+ .-+.+.|...|..+++.+-+++
T Consensus 65 ~aE~~~e~A~~vNa~~~~~lA~aa~~~ga-~lVhiSTDyVFDG~~~~~Y~E~D~~~P~nvYG~sKl~GE~~v~~~~~~~~ 143 (281)
T COG1091 65 KAESEPELAFAVNATGAENLARAAAEVGA-RLVHISTDYVFDGEKGGPYKETDTPNPLNVYGRSKLAGEEAVRAAGPRHL 143 (281)
T ss_pred cccCCHHHHHHhHHHHHHHHHHHHHHhCC-eEEEeecceEecCCCCCCCCCCCCCCChhhhhHHHHHHHHHHHHhCCCEE
Confidence 4556777777 59999999987653311 0 0001 1234457788999999999999
Q ss_pred EEEcCcccCCCC------------CCcceeeecCCCCccccCHHHHHHHHHHHhhCCCCCCcEEEEecCC-cCHHHHHHH
Q 021854 230 IIRTGVLQNTPG------------GKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVVNGE-EKVSDWKKC 296 (306)
Q Consensus 230 iiRPg~l~~~~~------------~~~~~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~~~g~~~~v~~g~-~s~~d~~~l 296 (306)
|||.+|+....+ .++.+ .-..++...+++.+|+|+++..++......+ +||+++.. .|+-|++..
T Consensus 144 I~Rtswv~g~~g~nFv~tml~la~~~~~l-~vv~Dq~gsPt~~~dlA~~i~~ll~~~~~~~-~yH~~~~g~~Swydfa~~ 221 (281)
T COG1091 144 ILRTSWVYGEYGNNFVKTMLRLAKEGKEL-KVVDDQYGSPTYTEDLADAILELLEKEKEGG-VYHLVNSGECSWYEFAKA 221 (281)
T ss_pred EEEeeeeecCCCCCHHHHHHHHhhcCCce-EEECCeeeCCccHHHHHHHHHHHHhccccCc-EEEEeCCCcccHHHHHHH
Confidence 999999764433 11222 2244455679999999999999998765544 99999955 488888777
Q ss_pred HHHHhh
Q 021854 297 FSRLME 302 (306)
Q Consensus 297 ~~~l~~ 302 (306)
+.+..+
T Consensus 222 I~~~~~ 227 (281)
T COG1091 222 IFEEAG 227 (281)
T ss_pred HHHHhC
Confidence 766654
|
|
| >PRK09291 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=2.1e-16 Score=141.73 Aligned_cols=179 Identities=15% Similarity=0.066 Sum_probs=122.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhh------hcCCCceeeeccCCCHHHHHHHhc-CccEEEEc
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTALR-GVRSIICP 170 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~------~~~~~v~~v~~D~~d~~~l~~~~~-~~d~vi~~ 170 (306)
|+++|+||||+|+||++++++|+++|++|++++|+.+...+ ..+..+.++.+|+.|.+++..++. ++|+|||+
T Consensus 1 m~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~id~vi~~ 80 (257)
T PRK09291 1 MSKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAEWDVDVLLNN 80 (257)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhcCCCCEEEEC
Confidence 36799999999999999999999999999999998765322 123468899999999999998887 78999998
Q ss_pred CCch------------------------------hhhcccccCCCEEEEecCcccccCCCCcccccchHHHH--HHHHHH
Q 021854 171 SEGF------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK--LAEQDE 218 (306)
Q Consensus 171 ~~g~------------------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~--~~~~aE 218 (306)
++.. +...+.+.+.++||++||..+..+......|..+++.. ..+..+
T Consensus 81 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~~~Y~~sK~a~~~~~~~l~ 160 (257)
T PRK09291 81 AGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARGKGKVVFTSSMAGLITGPFTGAYCASKHALEAIAEAMH 160 (257)
T ss_pred CCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEcChhhccCCCCcchhHHHHHHHHHHHHHHH
Confidence 4310 11223445678999999987765555555565443321 112223
Q ss_pred HHHHhcCCCEEEEEcCcccCCCCC-----C-------cc-eeeecCCCCccccCHHHHHHHHHHHhhCCCC
Q 021854 219 SMLMASGIPYTIIRTGVLQNTPGG-----K-------QG-FQFEEGCAANGSLSKEDAAFICVEALESIPQ 276 (306)
Q Consensus 219 ~~l~~sgi~~tiiRPg~l~~~~~~-----~-------~~-~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~~ 276 (306)
..+...++++++||||++...... . .. +....+....+.++.+|+++.++.++..+..
T Consensus 161 ~~~~~~gi~~~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 231 (257)
T PRK09291 161 AELKPFGIQVATVNPGPYLTGFNDTMAETPKRWYDPARNFTDPEDLAFPLEQFDPQEMIDAMVEVIPADTG 231 (257)
T ss_pred HHHHhcCcEEEEEecCcccccchhhhhhhhhhhcchhhHHHhhhhhhccccCCCHHHHHHHHHHHhcCCCC
Confidence 335567999999999986432210 0 00 0001112234557899999999999876543
|
|
| >PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=3.4e-16 Score=139.60 Aligned_cols=189 Identities=15% Similarity=0.114 Sum_probs=128.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh---c--CCCceeeeccCCCHHHHHHHhc-------Ccc
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---F--GTYVESMAGDASNKKFLKTALR-------GVR 165 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~---~--~~~v~~v~~D~~d~~~l~~~~~-------~~d 165 (306)
.+++++||||+|+||++++++|+++|++|++++|+.++.... . +.++.++.+|+.|.+++..+++ .+|
T Consensus 4 ~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 83 (251)
T PRK07231 4 EGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERFGSVD 83 (251)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence 468999999999999999999999999999999998663322 1 2357789999999999987765 469
Q ss_pred EEEEcCCch-------------------------------hhhcccccCCCEEEEecCcccccCCCCcccccchHHHH--
Q 021854 166 SIICPSEGF-------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK-- 212 (306)
Q Consensus 166 ~vi~~~~g~-------------------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~-- 212 (306)
+|||+++.. +...+.+.+.++||++||..++.+..+...|..++...
T Consensus 84 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~~sk~~~~~ 163 (251)
T PRK07231 84 ILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAIVNVASTAGLRPRPGLGWYNASKGAVIT 163 (251)
T ss_pred EEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcCCCCCchHHHHHHHHHHH
Confidence 999984310 11123346778999999998887766666665543321
Q ss_pred HHHHHHHHHHhcCCCEEEEEcCcccCCCCCC--------cceeeecCCCCccccCHHHHHHHHHHHhhCCC--CCCcEEE
Q 021854 213 LAEQDESMLMASGIPYTIIRTGVLQNTPGGK--------QGFQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFE 282 (306)
Q Consensus 213 ~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~--------~~~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~~~ 282 (306)
+.+.....+...+++++.++||++....... ....+........+++++|+|.+++.++..+. ..|..+.
T Consensus 164 ~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~ 243 (251)
T PRK07231 164 LTKALAAELGPDKIRVNAVAPVVVETGLLEAFMGEPTPENRAKFLATIPLGRLGTPEDIANAALFLASDEASWITGVTLV 243 (251)
T ss_pred HHHHHHHHhhhhCeEEEEEEECccCCCcchhhhcccChHHHHHHhcCCCCCCCcCHHHHHHHHHHHhCccccCCCCCeEE
Confidence 1111112233458999999999864322110 00011122223456899999999999997653 3467777
Q ss_pred EecC
Q 021854 283 VVNG 286 (306)
Q Consensus 283 v~~g 286 (306)
+.+|
T Consensus 244 ~~gg 247 (251)
T PRK07231 244 VDGG 247 (251)
T ss_pred ECCC
Confidence 7654
|
|
| >PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.72 E-value=2.9e-16 Score=139.19 Aligned_cols=190 Identities=14% Similarity=0.118 Sum_probs=128.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh------cCCCceeeeccCCCHHHHHHHhcC-------c
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALRG-------V 164 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~~~~-------~ 164 (306)
++++|+||||+|+||++++++|+++|++|+++.|++.+.... .+.++.++.+|+.|.+++.+++++ +
T Consensus 4 ~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 83 (246)
T PRK05653 4 QGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFGAL 83 (246)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 458999999999999999999999999999999998663221 234678889999999888777654 5
Q ss_pred cEEEEcCCch--------------------------hhhc----ccccCCCEEEEecCcccccCCCCcccccchHHHH--
Q 021854 165 RSIICPSEGF--------------------------ISNA----GSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK-- 212 (306)
Q Consensus 165 d~vi~~~~g~--------------------------~~~~----a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~-- 212 (306)
|+|||+++.. +.+. ..+.++++||++||.....+......|..++...
T Consensus 84 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~ss~~~~~~~~~~~~y~~sk~~~~~ 163 (246)
T PRK05653 84 DILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNISSVSGVTGNPGQTNYSAAKAGVIG 163 (246)
T ss_pred CEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhccCCCCCcHhHhHHHHHHH
Confidence 9999984321 1111 2346778999999987665555555554433211
Q ss_pred HHHHHHHHHHhcCCCEEEEEcCcccCCCCCC-ccee---eecCCCCccccCHHHHHHHHHHHhhCC--CCCCcEEEEecC
Q 021854 213 LAEQDESMLMASGIPYTIIRTGVLQNTPGGK-QGFQ---FEEGCAANGSLSKEDAAFICVEALESI--PQTGLIFEVVNG 286 (306)
Q Consensus 213 ~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~-~~~~---~~~g~~~~~~Is~~DVA~~iv~aL~~~--~~~g~~~~v~~g 286 (306)
..+.....+...+++++++|||.+....... .... .........+++++|+|+.++.++... ...++.|++++|
T Consensus 164 ~~~~l~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~~~~~~g~~~~~~gg 243 (246)
T PRK05653 164 FTKALALELASRGITVNAVAPGFIDTDMTEGLPEEVKAEILKEIPLGRLGQPEEVANAVAFLASDAASYITGQVIPVNGG 243 (246)
T ss_pred HHHHHHHHHhhcCeEEEEEEeCCcCCcchhhhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCccCCEEEeCCC
Confidence 1122222344568999999999865432211 0000 001111245678899999999999653 346789999887
Q ss_pred C
Q 021854 287 E 287 (306)
Q Consensus 287 ~ 287 (306)
.
T Consensus 244 ~ 244 (246)
T PRK05653 244 M 244 (246)
T ss_pred e
Confidence 5
|
|
| >COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.71 E-value=2.2e-16 Score=140.75 Aligned_cols=196 Identities=19% Similarity=0.211 Sum_probs=134.4
Q ss_pred EEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhc-CccEEEEcCCch------
Q 021854 102 VLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR-GVRSIICPSEGF------ 174 (306)
Q Consensus 102 ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~-~~d~vi~~~~g~------ 174 (306)
|+||||||+||++++.+|.+.||+|++++|++.+....+..++. .-+.+..... ++|+||+.++..
T Consensus 1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~~~~~v~-------~~~~~~~~~~~~~DavINLAG~~I~~rrW 73 (297)
T COG1090 1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQNLHPNVT-------LWEGLADALTLGIDAVINLAGEPIAERRW 73 (297)
T ss_pred CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhhhcCcccc-------ccchhhhcccCCCCEEEECCCCccccccC
Confidence 68999999999999999999999999999999887666554433 1123333344 799999885521
Q ss_pred ------------------hhhcc--cccCCCEEEEecCcccccCCCCc-----ccccchHHHHHHHHHHHH---HHhcCC
Q 021854 175 ------------------ISNAG--SLKGVQHVILLSQLSVYRGSGGI-----QALMKGNARKLAEQDESM---LMASGI 226 (306)
Q Consensus 175 ------------------~~~~a--~~~gvkr~V~iSS~~~~~~~~~~-----~~~~~~~a~~~~~~aE~~---l~~sgi 226 (306)
+.++. .+.+.+.+|.-|..+.|...... .+.......+..+..|.. .+..|.
T Consensus 74 t~~~K~~i~~SRi~~T~~L~e~I~~~~~~P~~~isaSAvGyYG~~~~~~~tE~~~~g~~Fla~lc~~WE~~a~~a~~~gt 153 (297)
T COG1090 74 TEKQKEEIRQSRINTTEKLVELIAASETKPKVLISASAVGYYGHSGDRVVTEESPPGDDFLAQLCQDWEEEALQAQQLGT 153 (297)
T ss_pred CHHHHHHHHHHHhHHHHHHHHHHHhccCCCcEEEecceEEEecCCCceeeecCCCCCCChHHHHHHHHHHHHhhhhhcCc
Confidence 22233 34667777777777777643221 111111122222222222 234689
Q ss_pred CEEEEEcCcccCCCCC-----------CcceeeecCCCCccccCHHHHHHHHHHHhhCCCCCCcEEEEecCC-cCHHHHH
Q 021854 227 PYTIIRTGVLQNTPGG-----------KQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVVNGE-EKVSDWK 294 (306)
Q Consensus 227 ~~tiiRPg~l~~~~~~-----------~~~~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~~~g~~~~v~~g~-~s~~d~~ 294 (306)
+++++|.|.+....++ +-+-.++.|.+-.+|||+||+.+++.++++++...| .||++++. .+.+++.
T Consensus 154 RvvllRtGvVLs~~GGaL~~m~~~fk~glGG~~GsGrQ~~SWIhieD~v~~I~fll~~~~lsG-p~N~taP~PV~~~~F~ 232 (297)
T COG1090 154 RVVLLRTGVVLSPDGGALGKMLPLFKLGLGGKLGSGRQWFSWIHIEDLVNAILFLLENEQLSG-PFNLTAPNPVRNKEFA 232 (297)
T ss_pred eEEEEEEEEEecCCCcchhhhcchhhhccCCccCCCCceeeeeeHHHHHHHHHHHHhCcCCCC-cccccCCCcCcHHHHH
Confidence 9999999996543321 122234567777899999999999999999887666 79999865 5889999
Q ss_pred HHHHHHhhhcC
Q 021854 295 KCFSRLMEKTG 305 (306)
Q Consensus 295 ~l~~~l~~~~~ 305 (306)
+.+..++.++.
T Consensus 233 ~al~r~l~RP~ 243 (297)
T COG1090 233 HALGRALHRPA 243 (297)
T ss_pred HHHHHHhCCCc
Confidence 99999998764
|
|
| >PRK06180 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=1.3e-15 Score=138.73 Aligned_cols=179 Identities=13% Similarity=0.102 Sum_probs=120.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh---cCCCceeeeccCCCHHHHHHHhc-------CccEE
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALR-------GVRSI 167 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~---~~~~v~~v~~D~~d~~~l~~~~~-------~~d~v 167 (306)
++++|+||||+|+||++++++|+++|++|++++|++++.... .+.++.++.+|++|.+++.++++ .+|+|
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d~v 82 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEALHPDRALARLLDVTDFDAIDAVVADAEATFGPIDVL 82 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 358899999999999999999999999999999998764432 23467889999999988877766 47999
Q ss_pred EEcCCch--------------------------hhhc----ccccCCCEEEEecCcccccCCCCcccccchHHHH--HHH
Q 021854 168 ICPSEGF--------------------------ISNA----GSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK--LAE 215 (306)
Q Consensus 168 i~~~~g~--------------------------~~~~----a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~--~~~ 215 (306)
||+++.. +.++ +++.+.++||++||..+..+..+...|..+++.. +.+
T Consensus 83 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iSS~~~~~~~~~~~~Y~~sK~a~~~~~~ 162 (277)
T PRK06180 83 VNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITSMGGLITMPGIGYYCGSKFALEGISE 162 (277)
T ss_pred EECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEecccccCCCCCcchhHHHHHHHHHHHH
Confidence 9984311 1111 2345667999999988876655666665543321 111
Q ss_pred HHHHHHHhcCCCEEEEEcCcccCCC-CCCc---ceeee-------------cCCCCccccCHHHHHHHHHHHhhCCCC
Q 021854 216 QDESMLMASGIPYTIIRTGVLQNTP-GGKQ---GFQFE-------------EGCAANGSLSKEDAAFICVEALESIPQ 276 (306)
Q Consensus 216 ~aE~~l~~sgi~~tiiRPg~l~~~~-~~~~---~~~~~-------------~g~~~~~~Is~~DVA~~iv~aL~~~~~ 276 (306)
.....+...++++++||||++.... .... ..... .......+.+++|+|++++.+++.+..
T Consensus 163 ~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~l~~~~~ 240 (277)
T PRK06180 163 SLAKEVAPFGIHVTAVEPGSFRTDWAGRSMVRTPRSIADYDALFGPIRQAREAKSGKQPGDPAKAAQAILAAVESDEP 240 (277)
T ss_pred HHHHHhhhhCcEEEEEecCCcccCccccccccCCCCcHhHHHHHHHHHHHHHhhccCCCCCHHHHHHHHHHHHcCCCC
Confidence 2222234469999999999864321 1000 00000 001123457899999999999986643
|
|
| >TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase | Back alignment and domain information |
|---|
Probab=99.71 E-value=2.7e-16 Score=140.49 Aligned_cols=189 Identities=15% Similarity=0.113 Sum_probs=125.8
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh------cCCCceeeeccCCCHHHHHHH-------hcCcc
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTA-------LRGVR 165 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~-------~~~~d 165 (306)
++++|||||+|+||++++++|+++|++|+++.|+.++.... .+.++.++.+|+.|.+++..+ +.+.|
T Consensus 1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 80 (255)
T TIGR01963 1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGGLD 80 (255)
T ss_pred CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence 36899999999999999999999999999999987653221 234688899999999866544 44579
Q ss_pred EEEEcCCch--------------------------hh----hcccccCCCEEEEecCcccccCCCCcccccchHHHH--H
Q 021854 166 SIICPSEGF--------------------------IS----NAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK--L 213 (306)
Q Consensus 166 ~vi~~~~g~--------------------------~~----~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~--~ 213 (306)
+|||+++.. +. +.+++.++++||++||..++.+......|..++... +
T Consensus 81 ~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~~~~~~~y~~sk~a~~~~ 160 (255)
T TIGR01963 81 ILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQGWGRIINIASAHGLVASPFKSAYVAAKHGLIGL 160 (255)
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhcCCCCCCchhHHHHHHHHHH
Confidence 999983210 01 122456788999999987766554445554433211 1
Q ss_pred HHHHHHHHHhcCCCEEEEEcCcccCCCC--------CCccee--------eecCCCCccccCHHHHHHHHHHHhhCCC--
Q 021854 214 AEQDESMLMASGIPYTIIRTGVLQNTPG--------GKQGFQ--------FEEGCAANGSLSKEDAAFICVEALESIP-- 275 (306)
Q Consensus 214 ~~~aE~~l~~sgi~~tiiRPg~l~~~~~--------~~~~~~--------~~~g~~~~~~Is~~DVA~~iv~aL~~~~-- 275 (306)
.+.....+...+++++++|||++..... ...... +..+.....+++++|+|++++.++.++.
T Consensus 161 ~~~~~~~~~~~~i~v~~i~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~~~~~ 240 (255)
T TIGR01963 161 TKVLALEVAAHGITVNAICPGYVRTPLVEKQIADQAKTRGIPEEQVIREVMLPGQPTKRFVTVDEVAETALFLASDAAAG 240 (255)
T ss_pred HHHHHHHhhhcCeEEEEEecCccccHHHHHHHHhhhcccCCCchHHHHHHHHccCccccCcCHHHHHHHHHHHcCccccC
Confidence 1111112334689999999998643210 000000 1112233568999999999999998643
Q ss_pred CCCcEEEEecCC
Q 021854 276 QTGLIFEVVNGE 287 (306)
Q Consensus 276 ~~g~~~~v~~g~ 287 (306)
..++.|++.+|-
T Consensus 241 ~~g~~~~~~~g~ 252 (255)
T TIGR01963 241 ITGQAIVLDGGW 252 (255)
T ss_pred ccceEEEEcCcc
Confidence 357889998654
|
This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. |
| >COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.71 E-value=5.4e-16 Score=136.45 Aligned_cols=181 Identities=15% Similarity=0.137 Sum_probs=129.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh---cC-CCceeeeccCCCHHHHHHHh-------cCccE
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FG-TYVESMAGDASNKKFLKTAL-------RGVRS 166 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~---~~-~~v~~v~~D~~d~~~l~~~~-------~~~d~ 166 (306)
.+|.++||||+++||.++++.|++.|++|++..|..++++++ ++ ..+..+..|++|+++++.++ ..+|+
T Consensus 5 ~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g~iDi 84 (246)
T COG4221 5 KGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGAGAALALALDVTDRAAVEAAIEALPEEFGRIDI 84 (246)
T ss_pred CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHHhhCcccE
Confidence 358999999999999999999999999999999999985543 33 36889999999998865544 45799
Q ss_pred EEEcCCch------------------------------hhhcccccCCCEEEEecCcccccCCCCcccccchHH--HHHH
Q 021854 167 IICPSEGF------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA--RKLA 214 (306)
Q Consensus 167 vi~~~~g~------------------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a--~~~~ 214 (306)
+|++++-. +...+.+.+-.++|++||.++..+..+...|..+++ +...
T Consensus 85 LvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiAG~~~y~~~~vY~ATK~aV~~fs 164 (246)
T COG4221 85 LVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIAGRYPYPGGAVYGATKAAVRAFS 164 (246)
T ss_pred EEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEeccccccccCCCCccchhhHHHHHHHH
Confidence 99984411 112244555669999999998877777777766543 2233
Q ss_pred HHHHHHHHhcCCCEEEEEcCcccCCC-----CCCcceeeecCCCCccccCHHHHHHHHHHHhhCCCCCC
Q 021854 215 EQDESMLMASGIPYTIIRTGVLQNTP-----GGKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTG 278 (306)
Q Consensus 215 ~~aE~~l~~sgi~~tiiRPg~l~~~~-----~~~~~~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~~~g 278 (306)
...+.-+...++++|.|.||...... ..+.......--.....+.++|+|+++.++++.|.+.+
T Consensus 165 ~~LR~e~~g~~IRVt~I~PG~v~~~~~s~v~~~g~~~~~~~~y~~~~~l~p~dIA~~V~~~~~~P~~vn 233 (246)
T COG4221 165 LGLRQELAGTGIRVTVISPGLVETTEFSTVRFEGDDERADKVYKGGTALTPEDIAEAVLFAATQPQHVN 233 (246)
T ss_pred HHHHHHhcCCCeeEEEecCceecceecccccCCchhhhHHHHhccCCCCCHHHHHHHHHHHHhCCCccc
Confidence 33444455579999999999864322 11111111111123468999999999999999998643
|
|
| >PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=1e-15 Score=136.03 Aligned_cols=174 Identities=16% Similarity=0.166 Sum_probs=123.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh------cCCCceeeeccCCCHHHHHHHhc-------Cc
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GV 164 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~~~-------~~ 164 (306)
.+++++||||+|+||++++++|+++|++|++++|+.++..+. .+.++.++.+|++|.+++.++++ ++
T Consensus 6 ~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 85 (239)
T PRK07666 6 QGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGSI 85 (239)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCCc
Confidence 468999999999999999999999999999999987653221 23468889999999998888775 68
Q ss_pred cEEEEcCCch--------------------------hhh----cccccCCCEEEEecCcccccCCCCcccccchHHHH--
Q 021854 165 RSIICPSEGF--------------------------ISN----AGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK-- 212 (306)
Q Consensus 165 d~vi~~~~g~--------------------------~~~----~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~-- 212 (306)
|++||+++.. +.. ...+.+.+++|++||...+.+..+...|..+++..
T Consensus 86 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~ 165 (239)
T PRK07666 86 DILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISSTAGQKGAAVTSAYSASKFGVLG 165 (239)
T ss_pred cEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcchhhccCCCCCcchHHHHHHHHH
Confidence 9999984311 011 12245678999999988776666666665543321
Q ss_pred HHHHHHHHHHhcCCCEEEEEcCcccCCCCCCcceeeecCCCCccccCHHHHHHHHHHHhhCC
Q 021854 213 LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESI 274 (306)
Q Consensus 213 ~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~~~~~~~~g~~~~~~Is~~DVA~~iv~aL~~~ 274 (306)
+.+.....+...++++++||||++........... . .....+++++|+|++++.++.++
T Consensus 166 ~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~--~-~~~~~~~~~~~~a~~~~~~l~~~ 224 (239)
T PRK07666 166 LTESLMQEVRKHNIRVTALTPSTVATDMAVDLGLT--D-GNPDKVMQPEDLAEFIVAQLKLN 224 (239)
T ss_pred HHHHHHHHhhccCcEEEEEecCcccCcchhhcccc--c-cCCCCCCCHHHHHHHHHHHHhCC
Confidence 12222233455799999999998765433221111 1 12345789999999999999876
|
|
| >PRK09186 flagellin modification protein A; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=2.9e-16 Score=140.71 Aligned_cols=189 Identities=15% Similarity=0.116 Sum_probs=121.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh-------cC-CCceeeeccCCCHHHHHHHhcC------
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------FG-TYVESMAGDASNKKFLKTALRG------ 163 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~-------~~-~~v~~v~~D~~d~~~l~~~~~~------ 163 (306)
.+++|+||||+|+||++++++|+++|++|+++.|++++..+. .+ ..+.++.+|++|++++.++++.
T Consensus 3 ~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~ 82 (256)
T PRK09186 3 KGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKYG 82 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Confidence 468999999999999999999999999999999988764221 11 2456779999999988887764
Q ss_pred -ccEEEEcCCch---------------------------------hhhcccccCCCEEEEecCcccccCCC---------
Q 021854 164 -VRSIICPSEGF---------------------------------ISNAGSLKGVQHVILLSQLSVYRGSG--------- 200 (306)
Q Consensus 164 -~d~vi~~~~g~---------------------------------~~~~a~~~gvkr~V~iSS~~~~~~~~--------- 200 (306)
+|++||+++.. +...+++.+.++||++||..+.....
T Consensus 83 ~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~ 162 (256)
T PRK09186 83 KIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQGGGNLVNISSIYGVVAPKFEIYEGTSM 162 (256)
T ss_pred CccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCceEEEEechhhhccccchhcccccc
Confidence 69999984210 11223445778999999976543211
Q ss_pred -CcccccchHHHH--HHHHHHHHHHhcCCCEEEEEcCcccCCCCCCcceeeecCCCCccccCHHHHHHHHHHHhhCCC--
Q 021854 201 -GIQALMKGNARK--LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIP-- 275 (306)
Q Consensus 201 -~~~~~~~~~a~~--~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~~~~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~-- 275 (306)
....|..+++.. +.+.....+...++++++|+||++.+.........+........+++++|+|++++.++.+..
T Consensus 163 ~~~~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~ 242 (256)
T PRK09186 163 TSPVEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGILDNQPEAFLNAYKKCCNGKGMLDPDDICGTLVFLLSDQSKY 242 (256)
T ss_pred CCcchhHHHHHHHHHHHHHHHHHhCcCCeEEEEEecccccCCCCHHHHHHHHhcCCccCCCCHHHhhhhHhheecccccc
Confidence 111243222111 111111223346899999999986533211000000011122457999999999999997553
Q ss_pred CCCcEEEEecC
Q 021854 276 QTGLIFEVVNG 286 (306)
Q Consensus 276 ~~g~~~~v~~g 286 (306)
..|+.+.+.+|
T Consensus 243 ~~g~~~~~~~g 253 (256)
T PRK09186 243 ITGQNIIVDDG 253 (256)
T ss_pred ccCceEEecCC
Confidence 35777877765
|
|
| >PRK12320 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=5.8e-16 Score=156.38 Aligned_cols=180 Identities=17% Similarity=0.200 Sum_probs=129.8
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcCCc------
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG------ 173 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~g------ 173 (306)
|+||||||+||||++++++|+++|++|++++|..... ...+++++.+|+.|.. +.+++.++|+|||+++.
T Consensus 1 MkILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~~---~~~~ve~v~~Dl~d~~-l~~al~~~D~VIHLAa~~~~~~~ 76 (699)
T PRK12320 1 MQILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHDA---LDPRVDYVCASLRNPV-LQELAGEADAVIHLAPVDTSAPG 76 (699)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhhc---ccCCceEEEccCCCHH-HHHHhcCCCEEEEcCccCccchh
Confidence 4799999999999999999999999999999876432 2246889999999984 78888999999998431
Q ss_pred --------hhhhcccccCCCEEEEecCcccccCCCCcccccchHHHHHHHHHHHHHHhcCCCEEEEEcCcccCCCCCCc-
Q 021854 174 --------FISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQ- 244 (306)
Q Consensus 174 --------~~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~~- 244 (306)
.+.++|++.++ ++|++||..+. . ..| ..+|.++...+++++++|++++........
T Consensus 77 ~vNv~Gt~nLleAA~~~Gv-RiV~~SS~~G~---~--~~~---------~~aE~ll~~~~~p~~ILR~~nVYGp~~~~~~ 141 (699)
T PRK12320 77 GVGITGLAHVANAAARAGA-RLLFVSQAAGR---P--ELY---------RQAETLVSTGWAPSLVIRIAPPVGRQLDWMV 141 (699)
T ss_pred hHHHHHHHHHHHHHHHcCC-eEEEEECCCCC---C--ccc---------cHHHHHHHhcCCCEEEEeCceecCCCCcccH
Confidence 14567778887 69999986321 1 111 136777877889999999999654211100
Q ss_pred -cee---e--ecCCCCccccCHHHHHHHHHHHhhCCCCCCcEEEEecCCc-CHHHHHHHHHHH
Q 021854 245 -GFQ---F--EEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVVNGEE-KVSDWKKCFSRL 300 (306)
Q Consensus 245 -~~~---~--~~g~~~~~~Is~~DVA~~iv~aL~~~~~~g~~~~v~~g~~-s~~d~~~l~~~l 300 (306)
... + ...+.....++++|++++++.+++.+. .+ +||++++.. ++.++.+++...
T Consensus 142 ~r~I~~~l~~~~~~~pI~vIyVdDvv~alv~al~~~~-~G-iyNIG~~~~~Si~el~~~i~~~ 202 (699)
T PRK12320 142 CRTVATLLRSKVSARPIRVLHLDDLVRFLVLALNTDR-NG-VVDLATPDTTNVVTAWRLLRSV 202 (699)
T ss_pred hHHHHHHHHHHHcCCceEEEEHHHHHHHHHHHHhCCC-CC-EEEEeCCCeeEHHHHHHHHHHh
Confidence 000 0 011222234699999999999997643 33 999999764 888887777654
|
|
| >PRK06914 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=7.9e-16 Score=140.01 Aligned_cols=189 Identities=16% Similarity=0.167 Sum_probs=124.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh--------cCCCceeeeccCCCHHHHHH---H---hcC
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES--------FGTYVESMAGDASNKKFLKT---A---LRG 163 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~--------~~~~v~~v~~D~~d~~~l~~---~---~~~ 163 (306)
++++++||||+|+||++++++|+++|++|++++|+.+...+. .+.++.++.+|++|+++++. + +..
T Consensus 2 ~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~ 81 (280)
T PRK06914 2 NKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHNFQLVLKEIGR 81 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHHHHHHHHhcCC
Confidence 467899999999999999999999999999999987653221 12368889999999888765 1 234
Q ss_pred ccEEEEcCCc----h----------------------hh----hcccccCCCEEEEecCcccccCCCCcccccchHHHH-
Q 021854 164 VRSIICPSEG----F----------------------IS----NAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK- 212 (306)
Q Consensus 164 ~d~vi~~~~g----~----------------------~~----~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~- 212 (306)
+|+|||+++. . +. +.+++.+.++||++||..+..+..+...|..+++..
T Consensus 82 id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~~~~ 161 (280)
T PRK06914 82 IDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKSGKIINISSISGRVGFPGLSPYVSSKYALE 161 (280)
T ss_pred eeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECcccccCCCCCCchhHHhHHHHH
Confidence 6999998431 0 01 113456778999999987766666666665433221
Q ss_pred -HHHHHHHHHHhcCCCEEEEEcCcccCCCCC-Ccc-e--eee---------------cCCCCccccCHHHHHHHHHHHhh
Q 021854 213 -LAEQDESMLMASGIPYTIIRTGVLQNTPGG-KQG-F--QFE---------------EGCAANGSLSKEDAAFICVEALE 272 (306)
Q Consensus 213 -~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~-~~~-~--~~~---------------~g~~~~~~Is~~DVA~~iv~aL~ 272 (306)
+.+.....+...+++++++|||.+...... ... . ... .......+++++|+|++++.+++
T Consensus 162 ~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~ 241 (280)
T PRK06914 162 GFSESLRLELKPFGIDVALIEPGSYNTNIWEVGKQLAENQSETTSPYKEYMKKIQKHINSGSDTFGNPIDVANLIVEIAE 241 (280)
T ss_pred HHHHHHHHHhhhhCCEEEEEecCCcccchhhccccccccccccccchHHHHHHHHHHHhhhhhccCCHHHHHHHHHHHHc
Confidence 111111123456999999999986433110 000 0 000 00112346789999999999998
Q ss_pred CCCCCCcEEEEecCC
Q 021854 273 SIPQTGLIFEVVNGE 287 (306)
Q Consensus 273 ~~~~~g~~~~v~~g~ 287 (306)
++... ..|++.++.
T Consensus 242 ~~~~~-~~~~~~~~~ 255 (280)
T PRK06914 242 SKRPK-LRYPIGKGV 255 (280)
T ss_pred CCCCC-cccccCCch
Confidence 77654 468877554
|
|
| >PRK06138 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.4e-15 Score=135.85 Aligned_cols=189 Identities=14% Similarity=0.086 Sum_probs=127.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh-----cCCCceeeeccCCCHHHHHHHhc-------Ccc
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-----FGTYVESMAGDASNKKFLKTALR-------GVR 165 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~-----~~~~v~~v~~D~~d~~~l~~~~~-------~~d 165 (306)
.+++++||||+|+||++++++|+++|++|+++.|+.+...+. .+.++.++.+|++|+++++++++ .+|
T Consensus 4 ~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id 83 (252)
T PRK06138 4 AGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARWGRLD 83 (252)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 468999999999999999999999999999999988653221 13457899999999998887765 679
Q ss_pred EEEEcCCch------------------------------hhhcccccCCCEEEEecCcccccCCCCcccccchHHHHHH-
Q 021854 166 SIICPSEGF------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLA- 214 (306)
Q Consensus 166 ~vi~~~~g~------------------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~~~- 214 (306)
+|||+++.. +..++++.+.++||++||..+..+..+...|..+++....
T Consensus 84 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~sK~a~~~~ 163 (252)
T PRK06138 84 VLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQGGGSIVNTASQLALAGGRGRAAYVASKGAIASL 163 (252)
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCCccHHHHHHHHHHHH
Confidence 999984310 1122345677899999998776655555566554332111
Q ss_pred -HHHHHHHHhcCCCEEEEEcCcccCCCCCCc------cee----eecCCCCccccCHHHHHHHHHHHhhCCC--CCCcEE
Q 021854 215 -EQDESMLMASGIPYTIIRTGVLQNTPGGKQ------GFQ----FEEGCAANGSLSKEDAAFICVEALESIP--QTGLIF 281 (306)
Q Consensus 215 -~~aE~~l~~sgi~~tiiRPg~l~~~~~~~~------~~~----~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~~ 281 (306)
+.....+...+++++++|||++........ ... .........+++++|+|++++.++.++. ..|..+
T Consensus 164 ~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~ 243 (252)
T PRK06138 164 TRAMALDHATDGIRVNAVAPGTIDTPYFRRIFARHADPEALREALRARHPMNRFGTAEEVAQAALFLASDESSFATGTTL 243 (252)
T ss_pred HHHHHHHHHhcCeEEEEEEECCccCcchhhhhccccChHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCccCCEE
Confidence 111112334689999999998643321100 000 0001112236889999999999998764 246777
Q ss_pred EEecC
Q 021854 282 EVVNG 286 (306)
Q Consensus 282 ~v~~g 286 (306)
.+.+|
T Consensus 244 ~~~~g 248 (252)
T PRK06138 244 VVDGG 248 (252)
T ss_pred EECCC
Confidence 77655
|
|
| >PRK08063 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=1e-15 Score=136.69 Aligned_cols=190 Identities=16% Similarity=0.152 Sum_probs=125.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEE-EecCcchhhh------hcCCCceeeeccCCCHHHHHHHhc-------C
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKA-LVKDKRNAME------SFGTYVESMAGDASNKKFLKTALR-------G 163 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~-l~R~~~~~~~------~~~~~v~~v~~D~~d~~~l~~~~~-------~ 163 (306)
.+++++||||+|+||++++++|+++|++|++ ..|+.++..+ ..+.++.++.+|++|++++..+++ .
T Consensus 3 ~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (250)
T PRK08063 3 SGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFGR 82 (250)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 3589999999999999999999999999876 4677654322 123467889999999998887776 4
Q ss_pred ccEEEEcCCch--------------------------h----hhcccccCCCEEEEecCcccccCCCCcccccchHHHH-
Q 021854 164 VRSIICPSEGF--------------------------I----SNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK- 212 (306)
Q Consensus 164 ~d~vi~~~~g~--------------------------~----~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~- 212 (306)
+|+|||+++.. + .+...+.+.++||++||.....+..+...|..+++..
T Consensus 83 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~sK~a~~ 162 (250)
T PRK08063 83 LDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGSIRYLENYTTVGVSKAALE 162 (250)
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhccCCCCccHHHHHHHHHH
Confidence 69999984310 1 1122345677999999987766555555564433211
Q ss_pred -HHHHHHHHHHhcCCCEEEEEcCcccCCCCC---Ccceee---ecCCCCccccCHHHHHHHHHHHhhCCC--CCCcEEEE
Q 021854 213 -LAEQDESMLMASGIPYTIIRTGVLQNTPGG---KQGFQF---EEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEV 283 (306)
Q Consensus 213 -~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~---~~~~~~---~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~~~v 283 (306)
+.+.....+...+++++.|+||++...... ...... ........+++++|+|++++.++.++. ..|+.+.+
T Consensus 163 ~~~~~~~~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~~~~~~g~~~~~ 242 (250)
T PRK08063 163 ALTRYLAVELAPKGIAVNAVSGGAVDTDALKHFPNREELLEDARAKTPAGRMVEPEDVANAVLFLCSPEADMIRGQTIIV 242 (250)
T ss_pred HHHHHHHHHHhHhCeEEEeEecCcccCchhhhccCchHHHHHHhcCCCCCCCcCHHHHHHHHHHHcCchhcCccCCEEEE
Confidence 111111223347899999999986533211 000000 011112347899999999999997654 35788988
Q ss_pred ecCC
Q 021854 284 VNGE 287 (306)
Q Consensus 284 ~~g~ 287 (306)
.+|.
T Consensus 243 ~gg~ 246 (250)
T PRK08063 243 DGGR 246 (250)
T ss_pred CCCe
Confidence 8765
|
|
| >PRK07454 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=9.5e-16 Score=136.40 Aligned_cols=176 Identities=15% Similarity=0.095 Sum_probs=121.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh------cCCCceeeeccCCCHHHHHHHhc-------Cc
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GV 164 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~~~-------~~ 164 (306)
.+++++||||+|+||+.++++|+++|++|++++|+.++.... .+.++.++.+|++|.+++..+++ .+
T Consensus 5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 84 (241)
T PRK07454 5 SMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFGCP 84 (241)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 368999999999999999999999999999999988653321 12468889999999988877665 47
Q ss_pred cEEEEcCCch------------------------------hhhcccccCCCEEEEecCcccccCCCCcccccchHHHHH-
Q 021854 165 RSIICPSEGF------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKL- 213 (306)
Q Consensus 165 d~vi~~~~g~------------------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~~- 213 (306)
|++||+++.. ..+.+.+.+.+++|++||...+.+......|..+++...
T Consensus 85 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~~~~~ 164 (241)
T PRK07454 85 DVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGGGLIINVSSIAARNAFPQWGAYCVSKAALAA 164 (241)
T ss_pred CEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCcCCCCccHHHHHHHHHHH
Confidence 9999984311 111233455689999999988776655556654433211
Q ss_pred -HHHHHHHHHhcCCCEEEEEcCcccCCCCCCcceeeecCCCCccccCHHHHHHHHHHHhhCCC
Q 021854 214 -AEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIP 275 (306)
Q Consensus 214 -~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~~~~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~ 275 (306)
.+.....+...++++++||||++........... .......+++++|+|++++.++.++.
T Consensus 165 ~~~~~a~e~~~~gi~v~~i~pg~i~t~~~~~~~~~--~~~~~~~~~~~~~va~~~~~l~~~~~ 225 (241)
T PRK07454 165 FTKCLAEEERSHGIRVCTITLGAVNTPLWDTETVQ--ADFDRSAMLSPEQVAQTILHLAQLPP 225 (241)
T ss_pred HHHHHHHHhhhhCCEEEEEecCcccCCcccccccc--cccccccCCCHHHHHHHHHHHHcCCc
Confidence 1112222345699999999999653321111110 11112356899999999999998774
|
|
| >PRK05876 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=2.9e-15 Score=136.72 Aligned_cols=201 Identities=16% Similarity=0.147 Sum_probs=132.1
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh------cCCCceeeeccCCCHHHHHHHhc-------C
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------G 163 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~~~-------~ 163 (306)
.++++++||||+|+||++++++|+++|++|++..|+.+.+.+. .+.++.++.+|++|.+++.++++ .
T Consensus 4 ~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 83 (275)
T PRK05876 4 FPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLGH 83 (275)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence 3578999999999999999999999999999999987653321 12357788999999998877765 3
Q ss_pred ccEEEEcCC----ch----------------------hhhc----ccccC-CCEEEEecCcccccCCCCcccccchHHHH
Q 021854 164 VRSIICPSE----GF----------------------ISNA----GSLKG-VQHVILLSQLSVYRGSGGIQALMKGNARK 212 (306)
Q Consensus 164 ~d~vi~~~~----g~----------------------~~~~----a~~~g-vkr~V~iSS~~~~~~~~~~~~~~~~~a~~ 212 (306)
+|++||+++ +. +..+ +.+.+ .+++|++||..++.+..+...|..+++..
T Consensus 84 id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~ 163 (275)
T PRK05876 84 VDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLVPNAGLGAYGVAKYGV 163 (275)
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhccCCCCCchHHHHHHHH
Confidence 699999843 10 0111 22233 57899999998887766666676544321
Q ss_pred --HHHHHHHHHHhcCCCEEEEEcCcccCCCCCCc----ce---------eeecCCCCccccCHHHHHHHHHHHhhCCCCC
Q 021854 213 --LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQ----GF---------QFEEGCAANGSLSKEDAAFICVEALESIPQT 277 (306)
Q Consensus 213 --~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~~----~~---------~~~~g~~~~~~Is~~DVA~~iv~aL~~~~~~ 277 (306)
+.+.....+...++++++|+||.+........ .. .++........++++|||+.++.++...
T Consensus 164 ~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~ai~~~--- 240 (275)
T PRK05876 164 VGLAETLAREVTADGIGVSVLCPMVVETNLVANSERIRGAACAQSSTTGSPGPLPLQDDNLGVDDIAQLTADAILAN--- 240 (275)
T ss_pred HHHHHHHHHHhhhcCcEEEEEEeCccccccccchhhhcCccccccccccccccccccccCCCHHHHHHHHHHHHHcC---
Confidence 12222222345799999999998653321110 00 0111112235689999999999999754
Q ss_pred CcEEEEecCCcCHHHHHHHHHHHhh
Q 021854 278 GLIFEVVNGEEKVSDWKKCFSRLME 302 (306)
Q Consensus 278 g~~~~v~~g~~s~~d~~~l~~~l~~ 302 (306)
+.|.+. ++.....+...+..+..
T Consensus 241 -~~~~~~-~~~~~~~~~~~~~~~~~ 263 (275)
T PRK05876 241 -RLYVLP-HAASRASIRRRFERIDR 263 (275)
T ss_pred -CeEEec-ChhhHHHHHHHHHHHHH
Confidence 345554 44445556666655543
|
|
| >PRK08219 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.3e-15 Score=133.85 Aligned_cols=184 Identities=15% Similarity=0.084 Sum_probs=122.4
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhc--CCCceeeeccCCCHHHHHHHhc---CccEEEEcCCc
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF--GTYVESMAGDASNKKFLKTALR---GVRSIICPSEG 173 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~--~~~v~~v~~D~~d~~~l~~~~~---~~d~vi~~~~g 173 (306)
+|+++||||+|+||+.++++|+++ ++|+++.|+.++..+.. ...++++.+|++|.+++.++++ ++|+|||+++.
T Consensus 3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag~ 81 (227)
T PRK08219 3 RPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAELPGATPFPVDLTDPEAIAAAVEQLGRLDVLVHNAGV 81 (227)
T ss_pred CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHhccceEEecCCCCHHHHHHHHHhcCCCCEEEECCCc
Confidence 579999999999999999999999 99999999986643221 1358899999999999999887 58999998331
Q ss_pred h------------------------------hhhcccccCCCEEEEecCcccccCCCCcccccchHHHHHHHHHHHHHH-
Q 021854 174 F------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLM- 222 (306)
Q Consensus 174 ~------------------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~~~~~aE~~l~- 222 (306)
. +.+.++ .+.+++|++||..++.+..+...|...++. .+.....++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~~~~v~~ss~~~~~~~~~~~~y~~~K~a--~~~~~~~~~~ 158 (227)
T PRK08219 82 ADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALR-AAHGHVVFINSGAGLRANPGWGSYAASKFA--LRALADALRE 158 (227)
T ss_pred CCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHH-hCCCeEEEEcchHhcCcCCCCchHHHHHHH--HHHHHHHHHH
Confidence 0 001111 235789999998887666555566443321 111111121
Q ss_pred -hcC-CCEEEEEcCcccCCCCCCcceeeecCCCCccccCHHHHHHHHHHHhhCCCCCCcEEEEecCC
Q 021854 223 -ASG-IPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVVNGE 287 (306)
Q Consensus 223 -~sg-i~~tiiRPg~l~~~~~~~~~~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~~~g~~~~v~~g~ 287 (306)
..+ ++++.|+||.+....................+++++|+|++++.+++++. .+.++++.-.+
T Consensus 159 ~~~~~i~~~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~l~~~~-~~~~~~~~~~~ 224 (227)
T PRK08219 159 EEPGNVRVTSVHPGRTDTDMQRGLVAQEGGEYDPERYLRPETVAKAVRFAVDAPP-DAHITEVVVRP 224 (227)
T ss_pred HhcCCceEEEEecCCccchHhhhhhhhhccccCCCCCCCHHHHHHHHHHHHcCCC-CCccceEEEec
Confidence 134 99999999986532211100000011122457999999999999998654 45677776544
|
|
| >KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.8e-15 Score=141.49 Aligned_cols=201 Identities=17% Similarity=0.175 Sum_probs=141.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCC--CeEEEEecCcch---hhhhc---CCCceeeeccCCCHHHHHHHhcCccEEEE
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRN---AMESF---GTYVESMAGDASNKKFLKTALRGVRSIIC 169 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g--~~V~~l~R~~~~---~~~~~---~~~v~~v~~D~~d~~~l~~~~~~~d~vi~ 169 (306)
.+.+++||||+||+|++++++|++++ .+|+++...+.. ..+.. +..++.+.+|+.|...+..+++++ .|+|
T Consensus 3 ~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~~~~~~v~~~~~D~~~~~~i~~a~~~~-~Vvh 81 (361)
T KOG1430|consen 3 KKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTGFRSGRVTVILGDLLDANSISNAFQGA-VVVH 81 (361)
T ss_pred cCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhcccCCceeEEecchhhhhhhhhhccCc-eEEE
Confidence 46899999999999999999999998 789988887753 11222 568999999999999999999999 6666
Q ss_pred c-CCc---------------------hhhhcccccCCCEEEEecCcccccCCCCc------ccccc---hHHHHHHHHHH
Q 021854 170 P-SEG---------------------FISNAGSLKGVQHVILLSQLSVYRGSGGI------QALMK---GNARKLAEQDE 218 (306)
Q Consensus 170 ~-~~g---------------------~~~~~a~~~gvkr~V~iSS~~~~~~~~~~------~~~~~---~~a~~~~~~aE 218 (306)
+ +.+ .++++|.+.+|+++|++||..+..+.... .+|.. ..+-..|.++|
T Consensus 82 ~aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~~v~~lIYtSs~~Vvf~g~~~~n~~E~~p~p~~~~d~Y~~sKa~aE 161 (361)
T KOG1430|consen 82 CAASPVPDFVENDRDLAMRVNVNGTLNVIEACKELGVKRLIYTSSAYVVFGGEPIINGDESLPYPLKHIDPYGESKALAE 161 (361)
T ss_pred eccccCccccccchhhheeecchhHHHHHHHHHHhCCCEEEEecCceEEeCCeecccCCCCCCCccccccccchHHHHHH
Confidence 5 221 15678999999999999999987542220 11110 11233466778
Q ss_pred HHHHhc----CCCEEEEEcCccc-CCCC------------CCcceeeecCCCCccccCHHHHHHHHHHHhh-----CCCC
Q 021854 219 SMLMAS----GIPYTIIRTGVLQ-NTPG------------GKQGFQFEEGCAANGSLSKEDAAFICVEALE-----SIPQ 276 (306)
Q Consensus 219 ~~l~~s----gi~~tiiRPg~l~-~~~~------------~~~~~~~~~g~~~~~~Is~~DVA~~iv~aL~-----~~~~ 276 (306)
.++.+. ++.++++||..+. .++. .......+.++....+++.+.||.+.+.+.. .+..
T Consensus 162 ~~Vl~an~~~~l~T~aLR~~~IYGpgd~~~~~~i~~~~~~g~~~f~~g~~~~~~~~~~~~Nva~ahilA~~aL~~~~~~~ 241 (361)
T KOG1430|consen 162 KLVLEANGSDDLYTCALRPPGIYGPGDKRLLPKIVEALKNGGFLFKIGDGENLNDFTYGENVAWAHILAARALLDKSPSV 241 (361)
T ss_pred HHHHHhcCCCCeeEEEEccccccCCCCccccHHHHHHHHccCceEEeeccccccceEEechhHHHHHHHHHHHHhcCCcc
Confidence 887653 3789999999855 3332 1222233455556778888888877766542 2446
Q ss_pred CCcEEEEecCCc--CHHHHHHHHHH
Q 021854 277 TGLIFEVVNGEE--KVSDWKKCFSR 299 (306)
Q Consensus 277 ~g~~~~v~~g~~--s~~d~~~l~~~ 299 (306)
.|+.|.++++.. ++..|..++..
T Consensus 242 ~Gq~yfI~d~~p~~~~~~~~~l~~~ 266 (361)
T KOG1430|consen 242 NGQFYFITDDTPVRFFDFLSPLVKA 266 (361)
T ss_pred CceEEEEeCCCcchhhHHHHHHHHh
Confidence 789999999774 56666644443
|
|
| >PRK06179 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.7e-15 Score=137.19 Aligned_cols=182 Identities=13% Similarity=0.091 Sum_probs=124.1
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcC-------ccEEEEcC
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRG-------VRSIICPS 171 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~-------~d~vi~~~ 171 (306)
+++|+||||+|+||++++++|+++|++|+++.|+.++... ..+++++.+|++|.+++++++++ +|++||++
T Consensus 4 ~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~--~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d~li~~a 81 (270)
T PRK06179 4 SKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAP--IPGVELLELDVTDDASVQAAVDEVIARAGRIDVLVNNA 81 (270)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc--cCCCeeEEeecCCHHHHHHHHHHHHHhCCCCCEEEECC
Confidence 5789999999999999999999999999999998766432 24688999999999998888764 59999984
Q ss_pred Cch------------------------------hhhcccccCCCEEEEecCcccccCCCCcccccchHHHH--HHHHHHH
Q 021854 172 EGF------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK--LAEQDES 219 (306)
Q Consensus 172 ~g~------------------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~--~~~~aE~ 219 (306)
+.. +.+.+++.+.++||++||..++.+......|..+++.. +.+....
T Consensus 82 g~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~ 161 (270)
T PRK06179 82 GVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQGSGRIINISSVLGFLPAPYMALYAASKHAVEGYSESLDH 161 (270)
T ss_pred CCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEECCccccCCCCCccHHHHHHHHHHHHHHHHHH
Confidence 310 11224557789999999988776655555565443321 1222233
Q ss_pred HHHhcCCCEEEEEcCcccCCCCCCc-----cee-ee---------cCCCCccccCHHHHHHHHHHHhhCCCCCCcEEEE
Q 021854 220 MLMASGIPYTIIRTGVLQNTPGGKQ-----GFQ-FE---------EGCAANGSLSKEDAAFICVEALESIPQTGLIFEV 283 (306)
Q Consensus 220 ~l~~sgi~~tiiRPg~l~~~~~~~~-----~~~-~~---------~g~~~~~~Is~~DVA~~iv~aL~~~~~~g~~~~v 283 (306)
.+...++++++|+||++........ ... +. .........+++|+|+.++.++..+.. ...|..
T Consensus 162 el~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~~~~~~~~-~~~~~~ 239 (270)
T PRK06179 162 EVRQFGIRVSLVEPAYTKTNFDANAPEPDSPLAEYDRERAVVSKAVAKAVKKADAPEVVADTVVKAALGPWP-KMRYTA 239 (270)
T ss_pred HHhhhCcEEEEEeCCCcccccccccCCCCCcchhhHHHHHHHHHHHHhccccCCCHHHHHHHHHHHHcCCCC-CeeEec
Confidence 3556799999999998653321110 000 00 000112346789999999999976542 344543
|
|
| >PRK05993 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=8.5e-16 Score=140.08 Aligned_cols=178 Identities=15% Similarity=0.125 Sum_probs=122.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhc--------CccEEEE
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--------GVRSIIC 169 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~--------~~d~vi~ 169 (306)
++++|+||||+|+||++++++|+++|++|++++|+.++..+....+++++.+|++|.++++.+++ .+|++||
T Consensus 3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id~li~ 82 (277)
T PRK05993 3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALEAEGLEAFQLDYAEPESIAALVAQVLELSGGRLDALFN 82 (277)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCceEEEccCCCHHHHHHHHHHHHHHcCCCccEEEE
Confidence 46899999999999999999999999999999999877654444568899999999988776654 4699999
Q ss_pred cCC----ch--------------------------hhhcccccCCCEEEEecCcccccCCCCcccccchHHHH--HHHHH
Q 021854 170 PSE----GF--------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK--LAEQD 217 (306)
Q Consensus 170 ~~~----g~--------------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~--~~~~a 217 (306)
+++ +. +.+.+.+.+.++||++||..++.+......|..+++.. +.+..
T Consensus 83 ~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~l 162 (277)
T PRK05993 83 NGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQGQGRIVQCSSILGLVPMKYRGAYNASKFAIEGLSLTL 162 (277)
T ss_pred CCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcCCCEEEEECChhhcCCCCccchHHHHHHHHHHHHHHH
Confidence 733 10 12234556788999999988776666666665543321 11222
Q ss_pred HHHHHhcCCCEEEEEcCcccCCCCCCc------ceee----------------ec-CCCCccccCHHHHHHHHHHHhhCC
Q 021854 218 ESMLMASGIPYTIIRTGVLQNTPGGKQ------GFQF----------------EE-GCAANGSLSKEDAAFICVEALESI 274 (306)
Q Consensus 218 E~~l~~sgi~~tiiRPg~l~~~~~~~~------~~~~----------------~~-g~~~~~~Is~~DVA~~iv~aL~~~ 274 (306)
...+...|+++++|+||++........ .... .. .......+++++||+.+++++..+
T Consensus 163 ~~el~~~gi~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~i~~a~~~~ 242 (277)
T PRK05993 163 RMELQGSGIHVSLIEPGPIETRFRANALAAFKRWIDIENSVHRAAYQQQMARLEGGGSKSRFKLGPEAVYAVLLHALTAP 242 (277)
T ss_pred HHHhhhhCCEEEEEecCCccCchhhHHHHHHhhhhccccchhHHHHHHHHHHHHhhhhccccCCCHHHHHHHHHHHHcCC
Confidence 223456799999999998653321100 0000 00 001112468999999999999865
Q ss_pred C
Q 021854 275 P 275 (306)
Q Consensus 275 ~ 275 (306)
.
T Consensus 243 ~ 243 (277)
T PRK05993 243 R 243 (277)
T ss_pred C
Confidence 4
|
|
| >PRK07904 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=2.2e-15 Score=135.87 Aligned_cols=171 Identities=16% Similarity=0.138 Sum_probs=119.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCC-CeEEEEecCcch-hhh---hc----CCCceeeeccCCCHHHHHHHhc------
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRN-AME---SF----GTYVESMAGDASNKKFLKTALR------ 162 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~l~R~~~~-~~~---~~----~~~v~~v~~D~~d~~~l~~~~~------ 162 (306)
+.++|+||||+|+||++++++|+++| ++|+++.|+.++ ..+ .. ..+++++.+|++|.++++++++
T Consensus 7 ~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~g 86 (253)
T PRK07904 7 NPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFAGG 86 (253)
T ss_pred CCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHhcC
Confidence 46899999999999999999999995 999999998865 221 11 2368899999999887655443
Q ss_pred CccEEEEcCCch------------------------------hhhcccccCCCEEEEecCcccccCCCCcccccchHHHH
Q 021854 163 GVRSIICPSEGF------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK 212 (306)
Q Consensus 163 ~~d~vi~~~~g~------------------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~ 212 (306)
++|++|++++.. +.+.+.+.+.++||++||..+..+..+...|..+++.-
T Consensus 87 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~~~~iv~isS~~g~~~~~~~~~Y~~sKaa~ 166 (253)
T PRK07904 87 DVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQGFGQIIAMSSVAGERVRRSNFVYGSTKAGL 166 (253)
T ss_pred CCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcCCceEEEEechhhcCCCCCCcchHHHHHHH
Confidence 689999763210 11234456678999999987765544445565544321
Q ss_pred --HHHHHHHHHHhcCCCEEEEEcCcccCCCCCCcceeeecCCCCccccCHHHHHHHHHHHhhCCC
Q 021854 213 --LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIP 275 (306)
Q Consensus 213 --~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~~~~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~ 275 (306)
+.+.....++..++++++++||++....... . ......++++|+|+.++..+.++.
T Consensus 167 ~~~~~~l~~el~~~~i~v~~v~Pg~v~t~~~~~--~-----~~~~~~~~~~~~A~~i~~~~~~~~ 224 (253)
T PRK07904 167 DGFYLGLGEALREYGVRVLVVRPGQVRTRMSAH--A-----KEAPLTVDKEDVAKLAVTAVAKGK 224 (253)
T ss_pred HHHHHHHHHHHhhcCCEEEEEeeCceecchhcc--C-----CCCCCCCCHHHHHHHHHHHHHcCC
Confidence 2233344566789999999999976432211 1 011235899999999999998653
|
|
| >PRK07806 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.8e-15 Score=135.11 Aligned_cols=189 Identities=15% Similarity=0.153 Sum_probs=121.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcch-hh------hhcCCCceeeeccCCCHHHHHHHhc-------C
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-AM------ESFGTYVESMAGDASNKKFLKTALR-------G 163 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~-~~------~~~~~~v~~v~~D~~d~~~l~~~~~-------~ 163 (306)
++++++||||+|+||++++++|+++|++|++++|+.+. .. ...+.++.++.+|++|.++++++++ +
T Consensus 5 ~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 84 (248)
T PRK07806 5 PGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEFGG 84 (248)
T ss_pred CCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence 46899999999999999999999999999999997643 11 1113457889999999998877665 5
Q ss_pred ccEEEEcCCch--------------------hhhcccc--cCCCEEEEecCccccc-CC-CCcccccchHHHHHHHHHHH
Q 021854 164 VRSIICPSEGF--------------------ISNAGSL--KGVQHVILLSQLSVYR-GS-GGIQALMKGNARKLAEQDES 219 (306)
Q Consensus 164 ~d~vi~~~~g~--------------------~~~~a~~--~gvkr~V~iSS~~~~~-~~-~~~~~~~~~~a~~~~~~aE~ 219 (306)
+|++||+++.. +.+.+.. ....++|++||..+.. +. .....+. .+...|..+|.
T Consensus 85 ~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~~~--~Y~~sK~a~e~ 162 (248)
T PRK07806 85 LDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSHQAHFIPTVKTMPEYE--PVARSKRAGED 162 (248)
T ss_pred CcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCchhhcCccccCCcccc--HHHHHHHHHHH
Confidence 79999884311 1222222 1235899999865431 11 1111111 11222333444
Q ss_pred HHH-------hcCCCEEEEEcCcccCCCCCC-----cceeeec-CCCCccccCHHHHHHHHHHHhhCCCCCCcEEEEecC
Q 021854 220 MLM-------ASGIPYTIIRTGVLQNTPGGK-----QGFQFEE-GCAANGSLSKEDAAFICVEALESIPQTGLIFEVVNG 286 (306)
Q Consensus 220 ~l~-------~sgi~~tiiRPg~l~~~~~~~-----~~~~~~~-g~~~~~~Is~~DVA~~iv~aL~~~~~~g~~~~v~~g 286 (306)
+++ ..++++++++|+++....... ....... ......+++++|+|++++.+++.+...|++|++.++
T Consensus 163 ~~~~l~~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~g~~~~i~~~ 242 (248)
T PRK07806 163 ALRALRPELAEKGIGFVVVSGDMIEGTVTATLLNRLNPGAIEARREAAGKLYTVSEFAAEVARAVTAPVPSGHIEYVGGA 242 (248)
T ss_pred HHHHHHHHhhccCeEEEEeCCccccCchhhhhhccCCHHHHHHHHhhhcccCCHHHHHHHHHHHhhccccCccEEEecCc
Confidence 333 368999999998754321100 0000000 001135789999999999999977678999999988
Q ss_pred Cc
Q 021854 287 EE 288 (306)
Q Consensus 287 ~~ 288 (306)
+.
T Consensus 243 ~~ 244 (248)
T PRK07806 243 DY 244 (248)
T ss_pred cc
Confidence 74
|
|
| >PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.68 E-value=4.3e-15 Score=131.77 Aligned_cols=189 Identities=15% Similarity=0.149 Sum_probs=124.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchh-h---h---hcCCCceeeeccCCCHHHHHHHhc-------C
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-M---E---SFGTYVESMAGDASNKKFLKTALR-------G 163 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~-~---~---~~~~~v~~v~~D~~d~~~l~~~~~-------~ 163 (306)
.+++++||||+|+||+++++.|+++|++|+++.|+..+. . . ..+.++.++.+|+.|.+++.++++ +
T Consensus 4 ~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 83 (248)
T PRK05557 4 EGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEFGG 83 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 468999999999999999999999999998888876531 1 1 123467888999999988877665 5
Q ss_pred ccEEEEcCCch--------------------------hh----hcccccCCCEEEEecCcccccCCCCcccccchHHHH-
Q 021854 164 VRSIICPSEGF--------------------------IS----NAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK- 212 (306)
Q Consensus 164 ~d~vi~~~~g~--------------------------~~----~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~- 212 (306)
+|+|||+++.. +. +...+.+.++||++||.....+......|..+++..
T Consensus 84 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss~~~~~~~~~~~~y~~sk~a~~ 163 (248)
T PRK05557 84 VDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISSVVGLMGNPGQANYAASKAGVI 163 (248)
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcccccCcCCCCCchhHHHHHHHH
Confidence 79999984310 11 122345677899999986665555555564433211
Q ss_pred -HHHHHHHHHHhcCCCEEEEEcCcccCCCCCCc--ce--eeecCCCCccccCHHHHHHHHHHHhhC--CCCCCcEEEEec
Q 021854 213 -LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQ--GF--QFEEGCAANGSLSKEDAAFICVEALES--IPQTGLIFEVVN 285 (306)
Q Consensus 213 -~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~~--~~--~~~~g~~~~~~Is~~DVA~~iv~aL~~--~~~~g~~~~v~~ 285 (306)
+.+.....+...++++++++||++........ .. .+........+.+++|+|+++..++.. ....++.|++.+
T Consensus 164 ~~~~~~a~~~~~~~i~~~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~i~~ 243 (248)
T PRK05557 164 GFTKSLARELASRGITVNAVAPGFIETDMTDALPEDVKEAILAQIPLGRLGQPEEIASAVAFLASDEAAYITGQTLHVNG 243 (248)
T ss_pred HHHHHHHHHhhhhCeEEEEEecCccCCccccccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCcccCCccccEEEecC
Confidence 11222223345689999999998743321110 00 000111223467899999999888865 334578999986
Q ss_pred C
Q 021854 286 G 286 (306)
Q Consensus 286 g 286 (306)
+
T Consensus 244 ~ 244 (248)
T PRK05557 244 G 244 (248)
T ss_pred C
Confidence 5
|
|
| >PRK07523 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.7e-15 Score=136.00 Aligned_cols=191 Identities=15% Similarity=0.151 Sum_probs=127.9
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh---c---CCCceeeeccCCCHHHHHHHhcC-------
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---F---GTYVESMAGDASNKKFLKTALRG------- 163 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~---~---~~~v~~v~~D~~d~~~l~~~~~~------- 163 (306)
..+++|+||||+|+||++++++|+++|++|+++.|+.++..+. . +.++.++.+|++|.+++++++++
T Consensus 8 ~~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 87 (255)
T PRK07523 8 LTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEIGP 87 (255)
T ss_pred CCCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhcCC
Confidence 3579999999999999999999999999999999988653321 1 23477889999999988887753
Q ss_pred ccEEEEcCCch--------------------------hhhc----ccccCCCEEEEecCcccccCCCCcccccchHHHH-
Q 021854 164 VRSIICPSEGF--------------------------ISNA----GSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK- 212 (306)
Q Consensus 164 ~d~vi~~~~g~--------------------------~~~~----a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~- 212 (306)
+|++||+++.. +.++ +.+.+.++||++||.....+..+...|..++...
T Consensus 88 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~~sK~a~~ 167 (255)
T PRK07523 88 IDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASVQSALARPGIAPYTATKGAVG 167 (255)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccchhccCCCCCccHHHHHHHHH
Confidence 69999984310 1111 2234678999999987766555555565443221
Q ss_pred -HHHHHHHHHHhcCCCEEEEEcCcccCCCCCC---cce---eeecCCCCccccCHHHHHHHHHHHhhCCC--CCCcEEEE
Q 021854 213 -LAEQDESMLMASGIPYTIIRTGVLQNTPGGK---QGF---QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEV 283 (306)
Q Consensus 213 -~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~---~~~---~~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~~~v 283 (306)
+.+.....+...++++++||||++....... ... .+........+..++|+|.+++.++.+.. -.|+++++
T Consensus 168 ~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~i~~ 247 (255)
T PRK07523 168 NLTKGMATDWAKHGLQCNAIAPGYFDTPLNAALVADPEFSAWLEKRTPAGRWGKVEELVGACVFLASDASSFVNGHVLYV 247 (255)
T ss_pred HHHHHHHHHhhHhCeEEEEEEECcccCchhhhhccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCccCcEEEE
Confidence 1122222234578999999999865332110 000 01111122346678999999999997543 35788998
Q ss_pred ecCC
Q 021854 284 VNGE 287 (306)
Q Consensus 284 ~~g~ 287 (306)
.+|.
T Consensus 248 ~gg~ 251 (255)
T PRK07523 248 DGGI 251 (255)
T ss_pred CCCe
Confidence 8764
|
|
| >PRK07326 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=3.6e-15 Score=132.04 Aligned_cols=185 Identities=19% Similarity=0.198 Sum_probs=123.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh---cC--CCceeeeccCCCHHHHHHHhc-------Ccc
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FG--TYVESMAGDASNKKFLKTALR-------GVR 165 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~---~~--~~v~~v~~D~~d~~~l~~~~~-------~~d 165 (306)
++++|+||||+|+||++++++|+++|++|++++|++++.... .. .++.++.+|+.|.+++..+++ ++|
T Consensus 5 ~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 84 (237)
T PRK07326 5 KGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAFGGLD 84 (237)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 468999999999999999999999999999999988653322 11 467889999999988877665 679
Q ss_pred EEEEcCCch--------------------------hhhccc---ccCCCEEEEecCcccccCCCCcccccchHHH--HHH
Q 021854 166 SIICPSEGF--------------------------ISNAGS---LKGVQHVILLSQLSVYRGSGGIQALMKGNAR--KLA 214 (306)
Q Consensus 166 ~vi~~~~g~--------------------------~~~~a~---~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~--~~~ 214 (306)
+|||+++.. +.+++. ..+.+++|++||.....+......|..+++. ...
T Consensus 85 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~y~~sk~a~~~~~ 164 (237)
T PRK07326 85 VLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRGGGYIINISSLAGTNFFAGGAAYNASKFGLVGFS 164 (237)
T ss_pred EEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHCCeEEEEECChhhccCCCCCchHHHHHHHHHHHH
Confidence 999983310 111111 2356789999998776655444455443321 111
Q ss_pred HHHHHHHHhcCCCEEEEEcCcccCCCCCCcceeeecCCCCccccCHHHHHHHHHHHhhCCCC-CCcEEEEecCC
Q 021854 215 EQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQ-TGLIFEVVNGE 287 (306)
Q Consensus 215 ~~aE~~l~~sgi~~tiiRPg~l~~~~~~~~~~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~~-~g~~~~v~~g~ 287 (306)
+.....++..++++++||||++......... .......++.+|+|+.++.++..+.. ......+.++.
T Consensus 165 ~~~~~~~~~~gi~v~~v~pg~~~t~~~~~~~-----~~~~~~~~~~~d~a~~~~~~l~~~~~~~~~~~~~~~~~ 233 (237)
T PRK07326 165 EAAMLDLRQYGIKVSTIMPGSVATHFNGHTP-----SEKDAWKIQPEDIAQLVLDLLKMPPRTLPSKIEVRPSR 233 (237)
T ss_pred HHHHHHhcccCcEEEEEeeccccCccccccc-----chhhhccCCHHHHHHHHHHHHhCCccccccceEEecCC
Confidence 2222224457999999999997543321110 01112358999999999999987753 33455555443
|
|
| >PRK07775 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=2.6e-15 Score=136.68 Aligned_cols=187 Identities=14% Similarity=0.094 Sum_probs=121.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh------cCCCceeeeccCCCHHHHHHHhc-------Cc
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GV 164 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~~~-------~~ 164 (306)
.+++++||||+|+||++++++|+++|++|++++|+.+...+. .+.++.++.+|++|.+++.++++ .+
T Consensus 9 ~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 88 (274)
T PRK07775 9 DRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALGEI 88 (274)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence 458999999999999999999999999999999987553221 12357788999999998887765 56
Q ss_pred cEEEEcCCch--------------------------hhhc----ccccCCCEEEEecCcccccCCCCcccccchHHHHHH
Q 021854 165 RSIICPSEGF--------------------------ISNA----GSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLA 214 (306)
Q Consensus 165 d~vi~~~~g~--------------------------~~~~----a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~~~ 214 (306)
|++||+++.. +.+. ..+.+..+||++||...+.+......|..+++....
T Consensus 89 d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~ 168 (274)
T PRK07775 89 EVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRRGDLIFVGSDVALRQRPHMGAYGAAKAGLEA 168 (274)
T ss_pred CEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECChHhcCCCCCcchHHHHHHHHHH
Confidence 9999984310 0111 223456789999998877665555556543322111
Q ss_pred --HHHHHHHHhcCCCEEEEEcCcccCCCCCC--cc----ee--ee--cCCCCccccCHHHHHHHHHHHhhCCCCCCcEEE
Q 021854 215 --EQDESMLMASGIPYTIIRTGVLQNTPGGK--QG----FQ--FE--EGCAANGSLSKEDAAFICVEALESIPQTGLIFE 282 (306)
Q Consensus 215 --~~aE~~l~~sgi~~tiiRPg~l~~~~~~~--~~----~~--~~--~g~~~~~~Is~~DVA~~iv~aL~~~~~~g~~~~ 282 (306)
+.....+...++++++||||.+....... .. +. .. .+.....+++++|+|++++.+++.+. .+.+|+
T Consensus 169 l~~~~~~~~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~~~~~~~~~-~~~~~~ 247 (274)
T PRK07775 169 MVTNLQMELEGTGVRASIVHPGPTLTGMGWSLPAEVIGPMLEDWAKWGQARHDYFLRASDLARAITFVAETPR-GAHVVN 247 (274)
T ss_pred HHHHHHHHhcccCeEEEEEeCCcccCcccccCChhhhhHHHHHHHHhcccccccccCHHHHHHHHHHHhcCCC-CCCeeE
Confidence 11111122358999999999864322110 00 00 00 11122457999999999999998764 345666
Q ss_pred Eec
Q 021854 283 VVN 285 (306)
Q Consensus 283 v~~ 285 (306)
+.=
T Consensus 248 ~~~ 250 (274)
T PRK07775 248 MEV 250 (274)
T ss_pred Eee
Confidence 654
|
|
| >PRK12827 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=5.2e-15 Score=131.63 Aligned_cols=190 Identities=15% Similarity=0.169 Sum_probs=124.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcc----hhh---h---hcCCCceeeeccCCCHHHHHHHhc-----
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR----NAM---E---SFGTYVESMAGDASNKKFLKTALR----- 162 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~----~~~---~---~~~~~v~~v~~D~~d~~~l~~~~~----- 162 (306)
++++++||||+|+||++++++|+++|++|+++.|... ... . ..+.++.++.+|+.|.+.++++++
T Consensus 5 ~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 84 (249)
T PRK12827 5 DSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAGVEE 84 (249)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 4689999999999999999999999999999776432 211 1 113467899999999988887763
Q ss_pred --CccEEEEcCCch--------------------------hhhccc-----ccCCCEEEEecCcccccCCCCcccccchH
Q 021854 163 --GVRSIICPSEGF--------------------------ISNAGS-----LKGVQHVILLSQLSVYRGSGGIQALMKGN 209 (306)
Q Consensus 163 --~~d~vi~~~~g~--------------------------~~~~a~-----~~gvkr~V~iSS~~~~~~~~~~~~~~~~~ 209 (306)
++|+|||+++.. +.+++. +.+.++||++||..++.+..+...|..++
T Consensus 85 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~~sK 164 (249)
T PRK12827 85 FGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARRGGRIVNIASVAGVRGNRGQVNYAASK 164 (249)
T ss_pred hCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCeEEEEECCchhcCCCCCCchhHHHH
Confidence 579999984310 122222 45678999999988876655555665543
Q ss_pred HHH--HHHHHHHHHHhcCCCEEEEEcCcccCCCCCCcce--eeecCCCCccccCHHHHHHHHHHHhhCCC--CCCcEEEE
Q 021854 210 ARK--LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGF--QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEV 283 (306)
Q Consensus 210 a~~--~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~~~~--~~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~~~v 283 (306)
+.. ..+.....+...+++++++|||++.......... ............+++|+|+++..++.+.. ..|+.+++
T Consensus 165 ~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~ 244 (249)
T PRK12827 165 AGLIGLTKTLANELAPRGITVNAVAPGAINTPMADNAAPTEHLLNPVPVQRLGEPDEVAALVAFLVSDAASYVTGQVIPV 244 (249)
T ss_pred HHHHHHHHHHHHHhhhhCcEEEEEEECCcCCCcccccchHHHHHhhCCCcCCcCHHHHHHHHHHHcCcccCCccCcEEEe
Confidence 321 1122222234468999999999975432211100 00001111224589999999999886543 34788888
Q ss_pred ecCC
Q 021854 284 VNGE 287 (306)
Q Consensus 284 ~~g~ 287 (306)
.+|.
T Consensus 245 ~~g~ 248 (249)
T PRK12827 245 DGGF 248 (249)
T ss_pred CCCC
Confidence 7653
|
|
| >TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=99.67 E-value=2.1e-15 Score=134.53 Aligned_cols=190 Identities=14% Similarity=0.158 Sum_probs=127.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh------cCCCceeeeccCCCHHHHHHHhc-------Cc
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GV 164 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~~~-------~~ 164 (306)
++++++||||+|+||++++++|+++|++|+++.|+.++..+. .+.++.++.+|++|.++++++++ .+
T Consensus 2 ~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 81 (250)
T TIGR03206 2 KDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGPV 81 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 468999999999999999999999999999999988653221 23468899999999988887765 57
Q ss_pred cEEEEcCCc-----h-------------------------hhhcccccCCCEEEEecCcccccCCCCcccccchHHH--H
Q 021854 165 RSIICPSEG-----F-------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--K 212 (306)
Q Consensus 165 d~vi~~~~g-----~-------------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~--~ 212 (306)
|++||+++. . +...+.+.+.+++|++||..++.+......|..+++. .
T Consensus 82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~iss~~~~~~~~~~~~Y~~sK~a~~~ 161 (250)
T TIGR03206 82 DVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVNIASDAARVGSSGEAVYAACKGGLVA 161 (250)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEECchhhccCCCCCchHHHHHHHHHH
Confidence 999998431 0 1112234567899999999887766666666544322 1
Q ss_pred HHHHHHHHHHhcCCCEEEEEcCcccCCCCC------Ccc--e--eeecCCCCccccCHHHHHHHHHHHhhCCC--CCCcE
Q 021854 213 LAEQDESMLMASGIPYTIIRTGVLQNTPGG------KQG--F--QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLI 280 (306)
Q Consensus 213 ~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~------~~~--~--~~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~ 280 (306)
+.+.....+...+++++++|||++...... ..+ . .+........+.+++|+|+++..++..+. ..|++
T Consensus 162 ~~~~la~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~ 241 (250)
T TIGR03206 162 FSKTMAREHARHGITVNVVCPGPTDTALLDDICGGAENPEKLREAFTRAIPLGRLGQPDDLPGAILFFSSDDASFITGQV 241 (250)
T ss_pred HHHHHHHHHhHhCcEEEEEecCcccchhHHhhhhccCChHHHHHHHHhcCCccCCcCHHHHHHHHHHHcCcccCCCcCcE
Confidence 111111123346899999999986432110 000 0 00011112235788999999999887643 35789
Q ss_pred EEEecCC
Q 021854 281 FEVVNGE 287 (306)
Q Consensus 281 ~~v~~g~ 287 (306)
+.+.+|.
T Consensus 242 ~~~~~g~ 248 (250)
T TIGR03206 242 LSVSGGL 248 (250)
T ss_pred EEeCCCc
Confidence 9988663
|
Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. |
| >PRK07060 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=2.7e-15 Score=133.37 Aligned_cols=190 Identities=17% Similarity=0.111 Sum_probs=127.5
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcC-CCceeeeccCCCHHHHHHHhc---CccEEEEcCC
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG-TYVESMAGDASNKKFLKTALR---GVRSIICPSE 172 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~-~~v~~v~~D~~d~~~l~~~~~---~~d~vi~~~~ 172 (306)
..+++++||||+|+||+++++.|+++|++|+++.|+.++..+... .++.++.+|++|.+.+.++++ .+|+|||+++
T Consensus 7 ~~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~d~vi~~ag 86 (245)
T PRK07060 7 FSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGETGCEPLRLDVGDDAAIRAALAAAGAFDGLVNCAG 86 (245)
T ss_pred cCCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeEEEecCCCHHHHHHHHHHhCCCCEEEECCC
Confidence 346899999999999999999999999999999998876543322 246788999999988888776 4799999843
Q ss_pred ch--------------------------hhhcc----cccC-CCEEEEecCcccccCCCCcccccchHHHHHH--HHHHH
Q 021854 173 GF--------------------------ISNAG----SLKG-VQHVILLSQLSVYRGSGGIQALMKGNARKLA--EQDES 219 (306)
Q Consensus 173 g~--------------------------~~~~a----~~~g-vkr~V~iSS~~~~~~~~~~~~~~~~~a~~~~--~~aE~ 219 (306)
.. +.+++ .+.+ .++||++||...+.+......|..+++.... +....
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~~sK~a~~~~~~~~a~ 166 (245)
T PRK07060 87 IASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALVGLPDHLAYCASKAALDAITRVLCV 166 (245)
T ss_pred CCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcCCCCCCcHhHHHHHHHHHHHHHHHH
Confidence 10 11111 1222 4799999998877665555566544332111 11112
Q ss_pred HHHhcCCCEEEEEcCcccCCCCC---Ccc---eeeecCCCCccccCHHHHHHHHHHHhhCCC--CCCcEEEEecC
Q 021854 220 MLMASGIPYTIIRTGVLQNTPGG---KQG---FQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVNG 286 (306)
Q Consensus 220 ~l~~sgi~~tiiRPg~l~~~~~~---~~~---~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~~~v~~g 286 (306)
.+...+++++.+|||.+...... ... ..+........+++++|+|++++.++..+. ..|+.+.+.+|
T Consensus 167 ~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~~~G~~~~~~~g 241 (245)
T PRK07060 167 ELGPHGIRVNSVNPTVTLTPMAAEAWSDPQKSGPMLAAIPLGRFAEVDDVAAPILFLLSDAASMVSGVSLPVDGG 241 (245)
T ss_pred HHhhhCeEEEEEeeCCCCCchhhhhccCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCcccCCccCcEEeECCC
Confidence 23346899999999986533211 000 000011123457899999999999997654 35788888765
|
|
| >PRK10538 malonic semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=2.9e-15 Score=134.13 Aligned_cols=177 Identities=14% Similarity=0.073 Sum_probs=119.0
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh---cCCCceeeeccCCCHHHHHHHhc-------CccEEEE
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALR-------GVRSIIC 169 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~---~~~~v~~v~~D~~d~~~l~~~~~-------~~d~vi~ 169 (306)
|+|+||||+|+||.+++++|+++|++|+++.|+++++... .+.++.++.+|++|.++++++++ ++|++||
T Consensus 1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi~ 80 (248)
T PRK10538 1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVLVN 80 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 5799999999999999999999999999999998764332 34568889999999988877664 6899999
Q ss_pred cCCch-------------------------------hhhcccccCCCEEEEecCcccccCCCCcccccchHHHHH--HHH
Q 021854 170 PSEGF-------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKL--AEQ 216 (306)
Q Consensus 170 ~~~g~-------------------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~~--~~~ 216 (306)
+++.. +...+.+.+.+++|++||..+..+..+...|..+++... .+.
T Consensus 81 ~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~~~~~~~~~ 160 (248)
T PRK10538 81 NAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLN 160 (248)
T ss_pred CCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCcccCCCCCCCchhHHHHHHHHHHHHH
Confidence 84310 111234467789999999877665555555654333211 111
Q ss_pred HHHHHHhcCCCEEEEEcCcccCCCCCCc----ce-eeecCCCCccccCHHHHHHHHHHHhhCCCC
Q 021854 217 DESMLMASGIPYTIIRTGVLQNTPGGKQ----GF-QFEEGCAANGSLSKEDAAFICVEALESIPQ 276 (306)
Q Consensus 217 aE~~l~~sgi~~tiiRPg~l~~~~~~~~----~~-~~~~g~~~~~~Is~~DVA~~iv~aL~~~~~ 276 (306)
....+...++.+++|+||.+........ .. ..........+++++|+|++++.++..+..
T Consensus 161 l~~~~~~~~i~v~~v~pg~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~~~~~~ 225 (248)
T PRK10538 161 LRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDDGKAEKTYQNTVALTPEDVSEAVWWVATLPAH 225 (248)
T ss_pred HHHHhcCCCcEEEEEeCCeecccccchhhccCcHHHHHhhccccCCCCHHHHHHHHHHHhcCCCc
Confidence 1122234689999999998752221100 00 000000123468999999999999986653
|
|
| >PRK12829 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=2.5e-15 Score=135.14 Aligned_cols=192 Identities=17% Similarity=0.143 Sum_probs=124.7
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh---cC-CCceeeeccCCCHHHHHHHhc-------Ccc
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FG-TYVESMAGDASNKKFLKTALR-------GVR 165 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~---~~-~~v~~v~~D~~d~~~l~~~~~-------~~d 165 (306)
.++++++||||+|+||+.++++|+++|++|+++.|+.+..... .+ .++.++.+|+.|++++..+++ ++|
T Consensus 9 ~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 88 (264)
T PRK12829 9 LDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERVFDTAVERFGGLD 88 (264)
T ss_pred cCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence 4579999999999999999999999999999999987653321 11 246889999999988877664 679
Q ss_pred EEEEcCCch---------------------------hhh----cccccCC-CEEEEecCcccccCCCCcccccchHHHH-
Q 021854 166 SIICPSEGF---------------------------ISN----AGSLKGV-QHVILLSQLSVYRGSGGIQALMKGNARK- 212 (306)
Q Consensus 166 ~vi~~~~g~---------------------------~~~----~a~~~gv-kr~V~iSS~~~~~~~~~~~~~~~~~a~~- 212 (306)
+|||+++.. +.+ .....+. ++||++||..+..+......|..+++..
T Consensus 89 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~~~~~~~~~~~y~~~K~a~~ 168 (264)
T PRK12829 89 VLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAGRLGYPGRTPYAASKWAVV 168 (264)
T ss_pred EEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEecccccccCCCCCchhHHHHHHHH
Confidence 999983311 011 1233444 6788888877655544444554433211
Q ss_pred -HHHHHHHHHHhcCCCEEEEEcCcccCCCCCC--------cceee-------ecCCCCccccCHHHHHHHHHHHhhCC--
Q 021854 213 -LAEQDESMLMASGIPYTIIRTGVLQNTPGGK--------QGFQF-------EEGCAANGSLSKEDAAFICVEALESI-- 274 (306)
Q Consensus 213 -~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~--------~~~~~-------~~g~~~~~~Is~~DVA~~iv~aL~~~-- 274 (306)
+.+.....+...++++++||||++....... ..... ........+++++|+|+++..++...
T Consensus 169 ~~~~~l~~~~~~~~i~~~~l~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~ 248 (264)
T PRK12829 169 GLVKSLAIELGPLGIRVNAILPGIVRGPRMRRVIEARAQQLGIGLDEMEQEYLEKISLGRMVEPEDIAATALFLASPAAR 248 (264)
T ss_pred HHHHHHHHHHhhcCeEEEEEecCCcCChHHHHHhhhhhhccCCChhHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCcccc
Confidence 1111222233468999999999864221100 00000 00111234799999999999988643
Q ss_pred CCCCcEEEEecCCc
Q 021854 275 PQTGLIFEVVNGEE 288 (306)
Q Consensus 275 ~~~g~~~~v~~g~~ 288 (306)
...++.|++.+|..
T Consensus 249 ~~~g~~~~i~~g~~ 262 (264)
T PRK12829 249 YITGQAISVDGNVE 262 (264)
T ss_pred CccCcEEEeCCCcc
Confidence 34578999998753
|
|
| >PRK07074 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=5.4e-15 Score=132.75 Aligned_cols=199 Identities=16% Similarity=0.112 Sum_probs=129.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhc----CCCceeeeccCCCHHHHHHHhc-------CccE
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF----GTYVESMAGDASNKKFLKTALR-------GVRS 166 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~----~~~v~~v~~D~~d~~~l~~~~~-------~~d~ 166 (306)
|+++++||||+|+||++++++|+++|++|++++|+.++..... +..++++.+|+.|.+++..+++ ++|+
T Consensus 1 ~~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~ 80 (257)
T PRK07074 1 TKRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGDARFVPVACDLTDAASLAAALANAAAERGPVDV 80 (257)
T ss_pred CCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 3579999999999999999999999999999999887643221 2367889999999998887775 4799
Q ss_pred EEEcCCch--------------------------h----hhcccccCCCEEEEecCcccccCCCCcccccchHHHH--HH
Q 021854 167 IICPSEGF--------------------------I----SNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK--LA 214 (306)
Q Consensus 167 vi~~~~g~--------------------------~----~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~--~~ 214 (306)
+||+++.. + ...+.+.+.++||++||...... .+...|..+++.. +.
T Consensus 81 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~-~~~~~y~~sK~a~~~~~ 159 (257)
T PRK07074 81 LVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIGSVNGMAA-LGHPAYSAAKAGLIHYT 159 (257)
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhcCC-CCCcccHHHHHHHHHHH
Confidence 99984310 0 01123456678999999755432 2223454332211 11
Q ss_pred HHHHHHHHhcCCCEEEEEcCcccCCCCCC----cceeee---cCCCCccccCHHHHHHHHHHHhhCC--CCCCcEEEEec
Q 021854 215 EQDESMLMASGIPYTIIRTGVLQNTPGGK----QGFQFE---EGCAANGSLSKEDAAFICVEALESI--PQTGLIFEVVN 285 (306)
Q Consensus 215 ~~aE~~l~~sgi~~tiiRPg~l~~~~~~~----~~~~~~---~g~~~~~~Is~~DVA~~iv~aL~~~--~~~g~~~~v~~ 285 (306)
+.....+...+++++.+|||++....... ...... .......+++++|+|+++..++.+. ...|+.+++.+
T Consensus 160 ~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~~ 239 (257)
T PRK07074 160 KLLAVEYGRFGIRANAVAPGTVKTQAWEARVAANPQVFEELKKWYPLQDFATPDDVANAVLFLASPAARAITGVCLPVDG 239 (257)
T ss_pred HHHHHHHhHhCeEEEEEEeCcCCcchhhcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCchhcCcCCcEEEeCC
Confidence 11111223358999999999864332110 000000 1222356799999999999999653 23578888888
Q ss_pred CCc-CHHHHHHHH
Q 021854 286 GEE-KVSDWKKCF 297 (306)
Q Consensus 286 g~~-s~~d~~~l~ 297 (306)
|.. +..|+.+.+
T Consensus 240 g~~~~~~~~~~~~ 252 (257)
T PRK07074 240 GLTAGNREMARTL 252 (257)
T ss_pred CcCcCChhhhhhh
Confidence 775 356665544
|
|
| >PRK06841 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=4.8e-15 Score=132.83 Aligned_cols=191 Identities=17% Similarity=0.130 Sum_probs=127.8
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhh---hhcCCCceeeeccCCCHHHHHHHhc-------CccE
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM---ESFGTYVESMAGDASNKKFLKTALR-------GVRS 166 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~---~~~~~~v~~v~~D~~d~~~l~~~~~-------~~d~ 166 (306)
..+++++||||+|+||++++++|+++|++|+++.|+.+... +..+..+..+.+|++|.+++.++++ .+|+
T Consensus 13 ~~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~ 92 (255)
T PRK06841 13 LSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVAEVAAQLLGGNAKGLVCDVSDSQSVEAAVAAVISAFGRIDI 92 (255)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence 45789999999999999999999999999999999876421 1122356789999999988877664 5699
Q ss_pred EEEcCCch--------------------------hhhc----ccccCCCEEEEecCcccccCCCCcccccchHHHH--HH
Q 021854 167 IICPSEGF--------------------------ISNA----GSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK--LA 214 (306)
Q Consensus 167 vi~~~~g~--------------------------~~~~----a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~--~~ 214 (306)
+||+++.. +..+ +.+.+.++||++||..+..+......|..+++.. +.
T Consensus 93 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~ 172 (255)
T PRK06841 93 LVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQAGVVALERHVAYCASKAGVVGMT 172 (255)
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcchhhccCCCCCchHHHHHHHHHHHH
Confidence 99984310 1111 2234678999999987766555555665543321 11
Q ss_pred HHHHHHHHhcCCCEEEEEcCcccCCCCCC-----cceeeecCCCCccccCHHHHHHHHHHHhhCCC--CCCcEEEEecCC
Q 021854 215 EQDESMLMASGIPYTIIRTGVLQNTPGGK-----QGFQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVNGE 287 (306)
Q Consensus 215 ~~aE~~l~~sgi~~tiiRPg~l~~~~~~~-----~~~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~~~v~~g~ 287 (306)
+.....+...+++++.|+||++....... ....+........+.+++|+|++++.++..+. ..|+++.+.+|.
T Consensus 173 ~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~i~~dgg~ 252 (255)
T PRK06841 173 KVLALEWGPYGITVNAISPTVVLTELGKKAWAGEKGERAKKLIPAGRFAYPEEIAAAALFLASDAAAMITGENLVIDGGY 252 (255)
T ss_pred HHHHHHHHhhCeEEEEEEeCcCcCcccccccchhHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCccCCEEEECCCc
Confidence 11222233468999999999865432210 00001111122456789999999999997653 357888887663
|
|
| >PRK12939 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=5.6e-15 Score=131.61 Aligned_cols=190 Identities=16% Similarity=0.138 Sum_probs=128.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh------cCCCceeeeccCCCHHHHHHHhc-------Cc
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GV 164 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~~~-------~~ 164 (306)
.+++++||||+|+||++++++|+++|++|+++.|++++.... .+.++.++.+|++|.++++++++ ++
T Consensus 6 ~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 85 (250)
T PRK12939 6 AGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAALGGL 85 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 469999999999999999999999999999999987753321 12468889999999998887764 57
Q ss_pred cEEEEcCCch--------------------------hhhc----ccccCCCEEEEecCcccccCCCCcccccchHHHH--
Q 021854 165 RSIICPSEGF--------------------------ISNA----GSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK-- 212 (306)
Q Consensus 165 d~vi~~~~g~--------------------------~~~~----a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~-- 212 (306)
|++||+++.. +.+. +.+.+.++||++||...+.+......|..+++..
T Consensus 86 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~~~~~ 165 (250)
T PRK12939 86 DGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTALWGAPKLGAYVASKGAVIG 165 (250)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECchhhccCCCCcchHHHHHHHHHH
Confidence 9999984320 1111 2234456999999987776655555565433321
Q ss_pred HHHHHHHHHHhcCCCEEEEEcCcccCCCCCC-cc----eeeecCCCCccccCHHHHHHHHHHHhhCCC--CCCcEEEEec
Q 021854 213 LAEQDESMLMASGIPYTIIRTGVLQNTPGGK-QG----FQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVN 285 (306)
Q Consensus 213 ~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~-~~----~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~~~v~~ 285 (306)
..+.....+...+++++.|+||.+....... .. ..+........+++++|+|++++.++..+. ..|+.+.+.+
T Consensus 166 ~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~i~~~g 245 (250)
T PRK12939 166 MTRSLARELGGRGITVNAIAPGLTATEATAYVPADERHAYYLKGRALERLQVPDDVAGAVLFLLSDAARFVTGQLLPVNG 245 (250)
T ss_pred HHHHHHHHHhhhCEEEEEEEECCCCCccccccCChHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCccccCccCcEEEECC
Confidence 1122222234568999999999864332111 00 001112233457889999999999997643 4678888887
Q ss_pred CC
Q 021854 286 GE 287 (306)
Q Consensus 286 g~ 287 (306)
|.
T Consensus 246 g~ 247 (250)
T PRK12939 246 GF 247 (250)
T ss_pred Cc
Confidence 63
|
|
| >PRK12746 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=5.4e-15 Score=132.41 Aligned_cols=189 Identities=19% Similarity=0.119 Sum_probs=123.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEE-ecCcchhhhh---c---CCCceeeeccCCCHHHHHHHhc--------
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKAL-VKDKRNAMES---F---GTYVESMAGDASNKKFLKTALR-------- 162 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l-~R~~~~~~~~---~---~~~v~~v~~D~~d~~~l~~~~~-------- 162 (306)
++++|+||||+|+||++++++|+++|++|+++ .|+.++..+. . +..+.++.+|++|.+++.++++
T Consensus 5 ~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~ 84 (254)
T PRK12746 5 DGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNELQI 84 (254)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHhcc
Confidence 46899999999999999999999999999875 5766543211 1 2357789999999999887766
Q ss_pred -----CccEEEEcCCch--------------------------hhhcccc--cCCCEEEEecCcccccCCCCcccccchH
Q 021854 163 -----GVRSIICPSEGF--------------------------ISNAGSL--KGVQHVILLSQLSVYRGSGGIQALMKGN 209 (306)
Q Consensus 163 -----~~d~vi~~~~g~--------------------------~~~~a~~--~gvkr~V~iSS~~~~~~~~~~~~~~~~~ 209 (306)
++|++||+++.. +.+.+.. .+.++||++||..++.+..+...|..++
T Consensus 85 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~sS~~~~~~~~~~~~Y~~sK 164 (254)
T PRK12746 85 RVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAEGRVINISSAEVRLGFTGSIAYGLSK 164 (254)
T ss_pred ccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECCHHhcCCCCCCcchHhhH
Confidence 479999984311 0011111 2235899999998877666666665543
Q ss_pred HHHH--HHHHHHHHHhcCCCEEEEEcCcccCCCCCC---cce--ee-ecCCCCccccCHHHHHHHHHHHhhCCC--CCCc
Q 021854 210 ARKL--AEQDESMLMASGIPYTIIRTGVLQNTPGGK---QGF--QF-EEGCAANGSLSKEDAAFICVEALESIP--QTGL 279 (306)
Q Consensus 210 a~~~--~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~---~~~--~~-~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~ 279 (306)
+... .+.....+...++++++++||++....... ... .+ .........++++|||+++..++.++. ..|+
T Consensus 165 ~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~ 244 (254)
T PRK12746 165 GALNTMTLPLAKHLGERGITVNTIMPGYTKTDINAKLLDDPEIRNFATNSSVFGRIGQVEDIADAVAFLASSDSRWVTGQ 244 (254)
T ss_pred HHHHHHHHHHHHHHhhcCcEEEEEEECCccCcchhhhccChhHHHHHHhcCCcCCCCCHHHHHHHHHHHcCcccCCcCCC
Confidence 3221 111122233468999999999864322110 000 00 011112345689999999998887643 3578
Q ss_pred EEEEecC
Q 021854 280 IFEVVNG 286 (306)
Q Consensus 280 ~~~v~~g 286 (306)
+|++.++
T Consensus 245 ~~~i~~~ 251 (254)
T PRK12746 245 IIDVSGG 251 (254)
T ss_pred EEEeCCC
Confidence 8998765
|
|
| >PRK07067 sorbitol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=3.3e-15 Score=134.27 Aligned_cols=190 Identities=14% Similarity=0.138 Sum_probs=127.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhh---hcCCCceeeeccCCCHHHHHHHhc-------CccEE
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALR-------GVRSI 167 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~---~~~~~v~~v~~D~~d~~~l~~~~~-------~~d~v 167 (306)
.+++++||||+|+||++++++|+++|++|+++.|+.++..+ .....+.++.+|++|.++++.+++ .+|++
T Consensus 5 ~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~l 84 (257)
T PRK07067 5 QGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVERFGGIDIL 84 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 46899999999999999999999999999999999876432 233468889999999988877765 46999
Q ss_pred EEcCCch--------------------------hhhcc----ccc-CCCEEEEecCcccccCCCCcccccchHHHH--HH
Q 021854 168 ICPSEGF--------------------------ISNAG----SLK-GVQHVILLSQLSVYRGSGGIQALMKGNARK--LA 214 (306)
Q Consensus 168 i~~~~g~--------------------------~~~~a----~~~-gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~--~~ 214 (306)
||+++.. +.+++ .+. .-.+||++||.....+..+...|..+++.. +.
T Consensus 85 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~ 164 (257)
T PRK07067 85 FNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRRGEALVSHYCATKAAVISYT 164 (257)
T ss_pred EECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhCCCCCCCchhhhhHHHHHHHH
Confidence 9984310 11111 111 235899999977655555555665443321 11
Q ss_pred HHHHHHHHhcCCCEEEEEcCcccCCCCCC--------cce-------eeecCCCCccccCHHHHHHHHHHHhhCCC--CC
Q 021854 215 EQDESMLMASGIPYTIIRTGVLQNTPGGK--------QGF-------QFEEGCAANGSLSKEDAAFICVEALESIP--QT 277 (306)
Q Consensus 215 ~~aE~~l~~sgi~~tiiRPg~l~~~~~~~--------~~~-------~~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~ 277 (306)
+.....+...++++++|+||++....... ... .+..+.....+.+++|||++++.++..+. ..
T Consensus 165 ~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~ 244 (257)
T PRK07067 165 QSAALALIRHGINVNAIAPGVVDTPMWDQVDALFARYENRPPGEKKRLVGEAVPLGRMGVPDDLTGMALFLASADADYIV 244 (257)
T ss_pred HHHHHHhcccCeEEEEEeeCcccchhhhhhhhhhhhccCCCHHHHHHHHhhcCCCCCccCHHHHHHHHHHHhCccccccc
Confidence 22222233578999999999864321100 000 01112233457789999999999997653 35
Q ss_pred CcEEEEecCC
Q 021854 278 GLIFEVVNGE 287 (306)
Q Consensus 278 g~~~~v~~g~ 287 (306)
|++|++.+|.
T Consensus 245 g~~~~v~gg~ 254 (257)
T PRK07067 245 AQTYNVDGGN 254 (257)
T ss_pred CcEEeecCCE
Confidence 8999998774
|
|
| >PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=6.6e-15 Score=130.77 Aligned_cols=191 Identities=13% Similarity=0.074 Sum_probs=126.8
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEE-ecCcchhhhh------cCCCceeeeccCCCHHHHHHHhc-------
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKAL-VKDKRNAMES------FGTYVESMAGDASNKKFLKTALR------- 162 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l-~R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~~~------- 162 (306)
.++++|+||||+|+||++++++|+++|++|+++ .|+.++.... .+.++.++.+|++|.+++.++++
T Consensus 3 ~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 82 (247)
T PRK05565 3 LMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKFG 82 (247)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhC
Confidence 457899999999999999999999999999998 8877653221 12357889999999998877765
Q ss_pred CccEEEEcCCch--------------------------hh----hcccccCCCEEEEecCcccccCCCCcccccchHHH-
Q 021854 163 GVRSIICPSEGF--------------------------IS----NAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR- 211 (306)
Q Consensus 163 ~~d~vi~~~~g~--------------------------~~----~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~- 211 (306)
++|+|||+++.. +. ....+.+.++||++||.....+......|..+++.
T Consensus 83 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~~~~~y~~sK~a~ 162 (247)
T PRK05565 83 KIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNISSIWGLIGASCEVLYSASKGAV 162 (247)
T ss_pred CCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCHhhccCCCCccHHHHHHHHH
Confidence 689999984311 11 11233567889999998776655555555443321
Q ss_pred -HHHHHHHHHHHhcCCCEEEEEcCcccCCCCCCcc----eeeecCCCCccccCHHHHHHHHHHHhhCCC--CCCcEEEEe
Q 021854 212 -KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQG----FQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVV 284 (306)
Q Consensus 212 -~~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~~~----~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~~~v~ 284 (306)
...+.....+...+++++.+|||++......... ..+..........+++|+|++++.++.... -.|+.+.+.
T Consensus 163 ~~~~~~~~~~~~~~gi~~~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~~ 242 (247)
T PRK05565 163 NAFTKALAKELAPSGIRVNAVAPGAIDTEMWSSFSEEDKEGLAEEIPLGRLGKPEEIAKVVLFLASDDASYITGQIITVD 242 (247)
T ss_pred HHHHHHHHHHHHHcCeEEEEEEECCccCccccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCCccCCccCcEEEec
Confidence 1111122223457999999999987543221100 000011112345788999999999997643 357888887
Q ss_pred cCC
Q 021854 285 NGE 287 (306)
Q Consensus 285 ~g~ 287 (306)
++.
T Consensus 243 ~~~ 245 (247)
T PRK05565 243 GGW 245 (247)
T ss_pred CCc
Confidence 653
|
|
| >PRK07024 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=5.3e-15 Score=133.13 Aligned_cols=171 Identities=14% Similarity=0.109 Sum_probs=118.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh---cCC--CceeeeccCCCHHHHHHHhcC-------cc
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGT--YVESMAGDASNKKFLKTALRG-------VR 165 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~---~~~--~v~~v~~D~~d~~~l~~~~~~-------~d 165 (306)
++++|+||||+|+||++++++|+++|++|+++.|+.++..+. .+. ++.++.+|++|.+++.++++. +|
T Consensus 1 ~~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id 80 (257)
T PRK07024 1 MPLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAAHGLPD 80 (257)
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHhCCCCC
Confidence 358999999999999999999999999999999988764322 111 578899999999988777653 69
Q ss_pred EEEEcCCch-------------------------------hhhcccccCCCEEEEecCcccccCCCCcccccchHHHHH-
Q 021854 166 SIICPSEGF-------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKL- 213 (306)
Q Consensus 166 ~vi~~~~g~-------------------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~~- 213 (306)
++||+++.. +...+.+.+.++||++||.....+......|..+++...
T Consensus 81 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asK~a~~~ 160 (257)
T PRK07024 81 VVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAARRGTLVGIASVAGVRGLPGAGAYSASKAAAIK 160 (257)
T ss_pred EEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCCCCCcchHHHHHHHHH
Confidence 999983310 111234466789999999887766555556655433221
Q ss_pred -HHHHHHHHHhcCCCEEEEEcCcccCCCCCCcceeeecCCCCccccCHHHHHHHHHHHhhCC
Q 021854 214 -AEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESI 274 (306)
Q Consensus 214 -~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~~~~~~~~g~~~~~~Is~~DVA~~iv~aL~~~ 274 (306)
.+.....+...++++++||||++......... + .....++++++|+.++.++.+.
T Consensus 161 ~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~--~----~~~~~~~~~~~a~~~~~~l~~~ 216 (257)
T PRK07024 161 YLESLRVELRPAGVRVVTIAPGYIRTPMTAHNP--Y----PMPFLMDADRFAARAARAIARG 216 (257)
T ss_pred HHHHHHHHhhccCcEEEEEecCCCcCchhhcCC--C----CCCCccCHHHHHHHHHHHHhCC
Confidence 11122223457999999999997533211111 1 1112478999999999999754
|
|
| >PRK05650 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=4.8e-15 Score=134.37 Aligned_cols=175 Identities=11% Similarity=0.060 Sum_probs=120.0
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh------cCCCceeeeccCCCHHHHHHHhc-------CccE
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GVRS 166 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~~~-------~~d~ 166 (306)
|+|+||||+|+||++++++|+++|++|+++.|+.++..+. .+.++.++.+|++|.+++..+++ ++|+
T Consensus 1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~ 80 (270)
T PRK05650 1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDV 80 (270)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 5799999999999999999999999999999988663321 23467889999999988877664 5799
Q ss_pred EEEcCCch------------------------------hhhcccccCCCEEEEecCcccccCCCCcccccchHHHH--HH
Q 021854 167 IICPSEGF------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK--LA 214 (306)
Q Consensus 167 vi~~~~g~------------------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~--~~ 214 (306)
+||+++.. +...+++.+.++||++||..+..+......|..+++.- +.
T Consensus 81 lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sKaa~~~~~ 160 (270)
T PRK05650 81 IVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQKSGRIVNIASMAGLMQGPAMSSYNVAKAGVVALS 160 (270)
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEECChhhcCCCCCchHHHHHHHHHHHHH
Confidence 99984310 11223456778999999998877666666665443321 12
Q ss_pred HHHHHHHHhcCCCEEEEEcCcccCCCCCCc---ceeee---cCCCCccccCHHHHHHHHHHHhhCC
Q 021854 215 EQDESMLMASGIPYTIIRTGVLQNTPGGKQ---GFQFE---EGCAANGSLSKEDAAFICVEALESI 274 (306)
Q Consensus 215 ~~aE~~l~~sgi~~tiiRPg~l~~~~~~~~---~~~~~---~g~~~~~~Is~~DVA~~iv~aL~~~ 274 (306)
+.....+...++++++|+||++........ ..... .......+++++|+|+.++.++++.
T Consensus 161 ~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vA~~i~~~l~~~ 226 (270)
T PRK05650 161 ETLLVELADDEIGVHVVCPSFFQTNLLDSFRGPNPAMKAQVGKLLEKSPITAADIADYIYQQVAKG 226 (270)
T ss_pred HHHHHHhcccCcEEEEEecCccccCcccccccCchhHHHHHHHHhhcCCCCHHHHHHHHHHHHhCC
Confidence 222233445799999999999754321110 00000 0011234689999999999999864
|
|
| >PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=6.5e-15 Score=132.38 Aligned_cols=191 Identities=15% Similarity=0.128 Sum_probs=125.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh-------cC-CCceeeeccCCCHHHHHHHhc-------
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------FG-TYVESMAGDASNKKFLKTALR------- 162 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~-------~~-~~v~~v~~D~~d~~~l~~~~~------- 162 (306)
|+++|+||||+|+||+++++.|+++|++|+++.|+..+.... .+ ..+.++.+|++|.+++..+++
T Consensus 1 m~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~ 80 (259)
T PRK12384 1 MNQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFG 80 (259)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 368999999999999999999999999999999987653221 12 358899999999888776654
Q ss_pred CccEEEEcCCch------------------------------hhhcccccC-CCEEEEecCcccccCCCCcccccchHHH
Q 021854 163 GVRSIICPSEGF------------------------------ISNAGSLKG-VQHVILLSQLSVYRGSGGIQALMKGNAR 211 (306)
Q Consensus 163 ~~d~vi~~~~g~------------------------------~~~~a~~~g-vkr~V~iSS~~~~~~~~~~~~~~~~~a~ 211 (306)
.+|++||+++.. +...+.+.+ -.++|++||..+..+......|..+++.
T Consensus 81 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sKaa 160 (259)
T PRK12384 81 RVDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGSKHNSGYSAAKFG 160 (259)
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCcccccCCCCCchhHHHHHH
Confidence 469999984310 011122344 3589999997665444444556544332
Q ss_pred H--HHHHHHHHHHhcCCCEEEEEcCcccCCCCCCc-------------ce---eeecCCCCccccCHHHHHHHHHHHhhC
Q 021854 212 K--LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQ-------------GF---QFEEGCAANGSLSKEDAAFICVEALES 273 (306)
Q Consensus 212 ~--~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~~-------------~~---~~~~g~~~~~~Is~~DVA~~iv~aL~~ 273 (306)
. +.+.....+...+++++.||||.+...+.... .. .+..+.....+++++||+.+++.++.+
T Consensus 161 ~~~l~~~la~e~~~~gi~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~l~~~ 240 (259)
T PRK12384 161 GVGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQSLLPQYAKKLGIKPDEVEQYYIDKVPLKRGCDYQDVLNMLLFYASP 240 (259)
T ss_pred HHHHHHHHHHHHHHcCcEEEEEecCCcccchhhhhhhHHHHHhcCCChHHHHHHHHHhCcccCCCCHHHHHHHHHHHcCc
Confidence 1 11222222445799999999997533221100 00 011122334578899999999998875
Q ss_pred CC--CCCcEEEEecCCc
Q 021854 274 IP--QTGLIFEVVNGEE 288 (306)
Q Consensus 274 ~~--~~g~~~~v~~g~~ 288 (306)
.. ..|++|++.+|..
T Consensus 241 ~~~~~~G~~~~v~~g~~ 257 (259)
T PRK12384 241 KASYCTGQSINVTGGQV 257 (259)
T ss_pred ccccccCceEEEcCCEE
Confidence 43 3578999998764
|
|
| >PRK08339 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=4.4e-15 Score=134.51 Aligned_cols=191 Identities=14% Similarity=0.144 Sum_probs=128.6
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh-------cCCCceeeeccCCCHHHHHHHhc------C
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------FGTYVESMAGDASNKKFLKTALR------G 163 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~-------~~~~v~~v~~D~~d~~~l~~~~~------~ 163 (306)
..+|+++||||+++||++++++|+++|++|+++.|+.++..+. .+.++.++.+|++|.++++++++ .
T Consensus 6 l~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~g~ 85 (263)
T PRK08339 6 LSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELKNIGE 85 (263)
T ss_pred CCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHHhhCC
Confidence 3578999999999999999999999999999999987663221 13468889999999988887765 4
Q ss_pred ccEEEEcCCch------------------------------hhhcccccCCCEEEEecCcccccCCCCcccccchHHH--
Q 021854 164 VRSIICPSEGF------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR-- 211 (306)
Q Consensus 164 ~d~vi~~~~g~------------------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~-- 211 (306)
+|++|++++.. +...+++.+.+++|++||..+..+......|..+++.
T Consensus 86 iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~~~~~~~~~~~y~asKaal~ 165 (263)
T PRK08339 86 PDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVAIKEPIPNIALSNVVRISMA 165 (263)
T ss_pred CcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCccccCCCCcchhhHHHHHHHH
Confidence 79999884310 1122344566899999999877665555556443321
Q ss_pred HHHHHHHHHHHhcCCCEEEEEcCcccCCCCC--------Ccc----e---eeecCCCCccccCHHHHHHHHHHHhhCCC-
Q 021854 212 KLAEQDESMLMASGIPYTIIRTGVLQNTPGG--------KQG----F---QFEEGCAANGSLSKEDAAFICVEALESIP- 275 (306)
Q Consensus 212 ~~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~--------~~~----~---~~~~g~~~~~~Is~~DVA~~iv~aL~~~~- 275 (306)
.+.+.....+...||++..|.||++...... ... . .+........+..++|+|.+++.++.+..
T Consensus 166 ~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v~fL~s~~~~ 245 (263)
T PRK08339 166 GLVRTLAKELGPKGITVNGIMPGIIRTDRVIQLAQDRAKREGKSVEEALQEYAKPIPLGRLGEPEEIGYLVAFLASDLGS 245 (263)
T ss_pred HHHHHHHHHhcccCeEEEEEEeCcCccHHHHHHHHhhhhccCCCHHHHHHHHhccCCcccCcCHHHHHHHHHHHhcchhc
Confidence 1222233334557899999999986432100 000 0 00011112345678999999999987543
Q ss_pred -CCCcEEEEecCC
Q 021854 276 -QTGLIFEVVNGE 287 (306)
Q Consensus 276 -~~g~~~~v~~g~ 287 (306)
-.|+++.+.+|.
T Consensus 246 ~itG~~~~vdgG~ 258 (263)
T PRK08339 246 YINGAMIPVDGGR 258 (263)
T ss_pred CccCceEEECCCc
Confidence 457888887664
|
|
| >PRK08017 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=5.9e-15 Score=132.20 Aligned_cols=178 Identities=18% Similarity=0.109 Sum_probs=119.7
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhc--------CccEEEEc
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--------GVRSIICP 170 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~--------~~d~vi~~ 170 (306)
.++|+||||+|+||+++++.|+++|++|+++.|+.++.+.....+++++.+|+.|.+++..+++ .+|.+||+
T Consensus 2 ~k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~ii~~ 81 (256)
T PRK08017 2 QKSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMNSLGFTGILLDLDDPESVERAADEVIALTDNRLYGLFNN 81 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHHhCCCeEEEeecCCHHHHHHHHHHHHHhcCCCCeEEEEC
Confidence 4789999999999999999999999999999999877544333467889999999887766553 35788887
Q ss_pred CCc----h--------------------------hhhcccccCCCEEEEecCcccccCCCCcccccchHHHHH--HHHHH
Q 021854 171 SEG----F--------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKL--AEQDE 218 (306)
Q Consensus 171 ~~g----~--------------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~~--~~~aE 218 (306)
++. . +.+.+.+.+.+++|++||..+..+......|..+++... .+...
T Consensus 82 ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~~~~~~~~~l~ 161 (256)
T PRK08017 82 AGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHGEGRIVMTSSVMGLISTPGRGAYAASKYALEAWSDALR 161 (256)
T ss_pred CCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCEEEEEcCcccccCCCCccHHHHHHHHHHHHHHHHH
Confidence 331 0 123345567789999999877665555555654332211 11122
Q ss_pred HHHHhcCCCEEEEEcCcccCCCCC-----C-cceeeecCCCCccccCHHHHHHHHHHHhhCCCC
Q 021854 219 SMLMASGIPYTIIRTGVLQNTPGG-----K-QGFQFEEGCAANGSLSKEDAAFICVEALESIPQ 276 (306)
Q Consensus 219 ~~l~~sgi~~tiiRPg~l~~~~~~-----~-~~~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~~ 276 (306)
.++...+++++++|||.+...... . .......+.....+++++|+|+.+..+++++..
T Consensus 162 ~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~~~~ 225 (256)
T PRK08017 162 MELRHSGIKVSLIEPGPIRTRFTDNVNQTQSDKPVENPGIAARFTLGPEAVVPKLRHALESPKP 225 (256)
T ss_pred HHHhhcCCEEEEEeCCCcccchhhcccchhhccchhhhHHHhhcCCCHHHHHHHHHHHHhCCCC
Confidence 334557899999999986432110 0 100011111123468999999999999987654
|
|
| >PRK08628 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=5.4e-15 Score=132.84 Aligned_cols=193 Identities=15% Similarity=0.122 Sum_probs=128.6
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhh--h---hcCCCceeeeccCCCHHHHHHHhc-------Cc
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM--E---SFGTYVESMAGDASNKKFLKTALR-------GV 164 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~--~---~~~~~v~~v~~D~~d~~~l~~~~~-------~~ 164 (306)
..+++++||||+|+||++++++|+++|++|++++|+.++.. + ..+.++.++.+|++|.++++.+++ .+
T Consensus 5 l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 84 (258)
T PRK08628 5 LKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDDEFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKFGRI 84 (258)
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence 45789999999999999999999999999999999886531 1 123468899999999998887775 57
Q ss_pred cEEEEcCCch-------------------------hhhcc---cccCCCEEEEecCcccccCCCCcccccchHHHH--HH
Q 021854 165 RSIICPSEGF-------------------------ISNAG---SLKGVQHVILLSQLSVYRGSGGIQALMKGNARK--LA 214 (306)
Q Consensus 165 d~vi~~~~g~-------------------------~~~~a---~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~--~~ 214 (306)
|+|||+++.. +...+ .+.+.++||++||..+..+..+...|..+++.. +.
T Consensus 85 d~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~~ 164 (258)
T PRK08628 85 DGLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKASRGAIVNISSKTALTGQGGTSGYAAAKGAQLALT 164 (258)
T ss_pred CEEEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhccCcEEEEECCHHhccCCCCCchhHHHHHHHHHHH
Confidence 9999984410 00111 112347899999988876665666665544322 11
Q ss_pred HHHHHHHHhcCCCEEEEEcCcccCCCCCC------cce-ee----ecCCCCccccCHHHHHHHHHHHhhCCC--CCCcEE
Q 021854 215 EQDESMLMASGIPYTIIRTGVLQNTPGGK------QGF-QF----EEGCAANGSLSKEDAAFICVEALESIP--QTGLIF 281 (306)
Q Consensus 215 ~~aE~~l~~sgi~~tiiRPg~l~~~~~~~------~~~-~~----~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~~ 281 (306)
+.....+...+++++.|+||.+....... ... .. ........+++++|+|++++.++.... ..|+.+
T Consensus 165 ~~l~~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~ 244 (258)
T PRK08628 165 REWAVALAKDGVRVNAVIPAEVMTPLYENWIATFDDPEAKLAAITAKIPLGHRMTTAEEIADTAVFLLSERSSHTTGQWL 244 (258)
T ss_pred HHHHHHHhhcCeEEEEEecCccCCHHHHHHhhhccCHHHHHHHHHhcCCccccCCCHHHHHHHHHHHhChhhccccCceE
Confidence 22222234578999999999864321100 000 00 000011246889999999999997653 457888
Q ss_pred EEecCCcC
Q 021854 282 EVVNGEEK 289 (306)
Q Consensus 282 ~v~~g~~s 289 (306)
.+.++...
T Consensus 245 ~~~gg~~~ 252 (258)
T PRK08628 245 FVDGGYVH 252 (258)
T ss_pred EecCCccc
Confidence 88766543
|
|
| >PRK12935 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.4e-14 Score=129.26 Aligned_cols=190 Identities=14% Similarity=0.087 Sum_probs=125.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCc-chhhhh------cCCCceeeeccCCCHHHHHHHhcC-------
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK-RNAMES------FGTYVESMAGDASNKKFLKTALRG------- 163 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~-~~~~~~------~~~~v~~v~~D~~d~~~l~~~~~~------- 163 (306)
.+++++||||+|+||++++++|+++|++|+++.+.. +...+. .+.++.++.+|++|.+++.++++.
T Consensus 5 ~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 84 (247)
T PRK12935 5 NGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHFGK 84 (247)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 468999999999999999999999999998765543 322111 123588899999999988887765
Q ss_pred ccEEEEcCCch--------------------------hhhc----ccccCCCEEEEecCcccccCCCCcccccchHHHH-
Q 021854 164 VRSIICPSEGF--------------------------ISNA----GSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK- 212 (306)
Q Consensus 164 ~d~vi~~~~g~--------------------------~~~~----a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~- 212 (306)
+|+|||+++.. +.++ ..+.+.++||++||..+..+..+...|..+++..
T Consensus 85 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~ 164 (247)
T PRK12935 85 VDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISSIIGQAGGFGQTNYSAAKAGML 164 (247)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchhhcCCCCCCcchHHHHHHHH
Confidence 69999984311 0111 1123457999999987766655666676544321
Q ss_pred -HHHHHHHHHHhcCCCEEEEEcCcccCCCCCCcc--e--eeecCCCCccccCHHHHHHHHHHHhhCCC-CCCcEEEEecC
Q 021854 213 -LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQG--F--QFEEGCAANGSLSKEDAAFICVEALESIP-QTGLIFEVVNG 286 (306)
Q Consensus 213 -~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~~~--~--~~~~g~~~~~~Is~~DVA~~iv~aL~~~~-~~g~~~~v~~g 286 (306)
+.+.....+...++++++++||++......... . ..........+.+++|+|++++.+++... ..|+.|++.++
T Consensus 165 ~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~~~~~~~~~~g~~~~i~~g 244 (247)
T PRK12935 165 GFTKSLALELAKTNVTVNAICPGFIDTEMVAEVPEEVRQKIVAKIPKKRFGQADEIAKGVVYLCRDGAYITGQQLNINGG 244 (247)
T ss_pred HHHHHHHHHHHHcCcEEEEEEeCCCcChhhhhccHHHHHHHHHhCCCCCCcCHHHHHHHHHHHcCcccCccCCEEEeCCC
Confidence 111111122346899999999986532211100 0 01112223457899999999999886543 46789999876
Q ss_pred C
Q 021854 287 E 287 (306)
Q Consensus 287 ~ 287 (306)
.
T Consensus 245 ~ 245 (247)
T PRK12935 245 L 245 (247)
T ss_pred c
Confidence 4
|
|
| >PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.5e-14 Score=130.13 Aligned_cols=188 Identities=13% Similarity=0.110 Sum_probs=120.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcch--hhhh---cCCCceeeeccCCCHHHHHHHhc-------Ccc
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN--AMES---FGTYVESMAGDASNKKFLKTALR-------GVR 165 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~--~~~~---~~~~v~~v~~D~~d~~~l~~~~~-------~~d 165 (306)
.+++++||||+|+||++++++|+++|++|+++.|+... ..+. .+..+.++.+|++|.+++.++++ .+|
T Consensus 7 ~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 86 (260)
T PRK12823 7 AGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSELVHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAFGRID 86 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchHHHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHcCCCe
Confidence 46899999999999999999999999999999997532 1111 13457788999999887776654 579
Q ss_pred EEEEcCCch-------------------------------hhhcccccCCCEEEEecCcccccCCCCcccccchHHHH--
Q 021854 166 SIICPSEGF-------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK-- 212 (306)
Q Consensus 166 ~vi~~~~g~-------------------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~-- 212 (306)
++||+++.. +...+.+.+.++||++||...+.. ....|..+++..
T Consensus 87 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~--~~~~Y~~sK~a~~~ 164 (260)
T PRK12823 87 VLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGGGAIVNVSSIATRGI--NRVPYSAAKGGVNA 164 (260)
T ss_pred EEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEcCccccCC--CCCccHHHHHHHHH
Confidence 999985311 112233456679999999876532 223454433211
Q ss_pred HHHHHHHHHHhcCCCEEEEEcCcccCCCC----------CCcceee-------ecCCCCccccCHHHHHHHHHHHhhCCC
Q 021854 213 LAEQDESMLMASGIPYTIIRTGVLQNTPG----------GKQGFQF-------EEGCAANGSLSKEDAAFICVEALESIP 275 (306)
Q Consensus 213 ~~~~aE~~l~~sgi~~tiiRPg~l~~~~~----------~~~~~~~-------~~g~~~~~~Is~~DVA~~iv~aL~~~~ 275 (306)
+.+.....+...+++++.|+||++..... ....... .......-+..++|+|++++.++.+..
T Consensus 165 ~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~ 244 (260)
T PRK12823 165 LTASLAFEYAEHGIRVNAVAPGGTEAPPRRVPRNAAPQSEQEKAWYQQIVDQTLDSSLMKRYGTIDEQVAAILFLASDEA 244 (260)
T ss_pred HHHHHHHHhcccCcEEEEEecCccCCcchhhHHhhccccccccccHHHHHHHHhccCCcccCCCHHHHHHHHHHHcCccc
Confidence 11111122334689999999998653211 0000000 001111234578999999999886543
Q ss_pred --CCCcEEEEecCC
Q 021854 276 --QTGLIFEVVNGE 287 (306)
Q Consensus 276 --~~g~~~~v~~g~ 287 (306)
..|+++++.+|+
T Consensus 245 ~~~~g~~~~v~gg~ 258 (260)
T PRK12823 245 SYITGTVLPVGGGD 258 (260)
T ss_pred ccccCcEEeecCCC
Confidence 357899998765
|
|
| >PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed | Back alignment and domain information |
|---|
Probab=99.64 E-value=2e-14 Score=127.62 Aligned_cols=190 Identities=13% Similarity=0.124 Sum_probs=126.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhh---hcCCCceeeeccCCCHHHHHHHh-------cCccEE
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTAL-------RGVRSI 167 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~---~~~~~v~~v~~D~~d~~~l~~~~-------~~~d~v 167 (306)
++++++||||+|+||+++++.|+++|+.|++..|+.++... ..+.+++++.+|++|.+++++++ ..+|++
T Consensus 5 ~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 84 (245)
T PRK12936 5 SGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEADLEGVDIL 84 (245)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 46899999999999999999999999999988888766443 23446888999999998887764 357999
Q ss_pred EEcCCch--------------------------hhhc----ccccCCCEEEEecCcccccCCCCcccccchHHHH--HHH
Q 021854 168 ICPSEGF--------------------------ISNA----GSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK--LAE 215 (306)
Q Consensus 168 i~~~~g~--------------------------~~~~----a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~--~~~ 215 (306)
||+++.. +.++ ..+.+.++||++||..+..+......|..+++.. +.+
T Consensus 85 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sk~a~~~~~~ 164 (245)
T PRK12936 85 VNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSVVGVTGNPGQANYCASKAGMIGFSK 164 (245)
T ss_pred EECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCHHhCcCCCCCcchHHHHHHHHHHHH
Confidence 9984310 1111 2224667999999987766555555565443311 222
Q ss_pred HHHHHHHhcCCCEEEEEcCcccCCCCCC-cce---eeecCCCCccccCHHHHHHHHHHHhhCCC--CCCcEEEEecCC
Q 021854 216 QDESMLMASGIPYTIIRTGVLQNTPGGK-QGF---QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVNGE 287 (306)
Q Consensus 216 ~aE~~l~~sgi~~tiiRPg~l~~~~~~~-~~~---~~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~~~v~~g~ 287 (306)
.....+...+++++.|+||++....... ... .+........+.+++|+|+++..++..+. ..|+.+++.+|-
T Consensus 165 ~la~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~~~~~~~~~G~~~~~~~g~ 242 (245)
T PRK12936 165 SLAQEIATRNVTVNCVAPGFIESAMTGKLNDKQKEAIMGAIPMKRMGTGAEVASAVAYLASSEAAYVTGQTIHVNGGM 242 (245)
T ss_pred HHHHHhhHhCeEEEEEEECcCcCchhcccChHHHHHHhcCCCCCCCcCHHHHHHHHHHHcCccccCcCCCEEEECCCc
Confidence 2222344578999999999864322111 000 00011111235578999999998886543 258899988764
|
|
| >TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase | Back alignment and domain information |
|---|
Probab=99.64 E-value=7.8e-15 Score=130.94 Aligned_cols=190 Identities=15% Similarity=0.157 Sum_probs=123.4
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcch-hhh---hcCCCceeeeccCCCHHHHHHHhc-------Ccc
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-AME---SFGTYVESMAGDASNKKFLKTALR-------GVR 165 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~-~~~---~~~~~v~~v~~D~~d~~~l~~~~~-------~~d 165 (306)
.++++|+||||+|+||++++++|+++|++|+++.|+... ..+ ..+..+.++.+|++|.+++..+++ .+|
T Consensus 3 ~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 82 (248)
T TIGR01832 3 LEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPSETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEFGHID 82 (248)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 357999999999999999999999999999999997632 111 223468899999999988876654 479
Q ss_pred EEEEcCCch--------------------------hhhc----ccccC-CCEEEEecCcccccCCCCcccccchHHHHH-
Q 021854 166 SIICPSEGF--------------------------ISNA----GSLKG-VQHVILLSQLSVYRGSGGIQALMKGNARKL- 213 (306)
Q Consensus 166 ~vi~~~~g~--------------------------~~~~----a~~~g-vkr~V~iSS~~~~~~~~~~~~~~~~~a~~~- 213 (306)
++||+++.. +.++ ..+.+ .+++|++||..++.+......|..+++...
T Consensus 83 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sKaa~~~ 162 (248)
T TIGR01832 83 ILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQGGIRVPSYTASKHGVAG 162 (248)
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhccCCCCCchhHHHHHHHHH
Confidence 999984310 1111 11233 468999999887766555556655433211
Q ss_pred -HHHHHHHHHhcCCCEEEEEcCcccCCCCCC-cc--e---eeecCCCCccccCHHHHHHHHHHHhhCCC--CCCcEEEEe
Q 021854 214 -AEQDESMLMASGIPYTIIRTGVLQNTPGGK-QG--F---QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVV 284 (306)
Q Consensus 214 -~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~-~~--~---~~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~~~v~ 284 (306)
.+.....+...+++++.|+||++....... .. . .+........+++++|+|++++.++.... ..|+++.+.
T Consensus 163 ~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~d 242 (248)
T TIGR01832 163 LTKLLANEWAAKGINVNAIAPGYMATNNTQALRADEDRNAAILERIPAGRWGTPDDIGGPAVFLASSASDYVNGYTLAVD 242 (248)
T ss_pred HHHHHHHHhCccCcEEEEEEECcCcCcchhccccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCcCCcEEEeC
Confidence 111111122358999999999865332110 00 0 00001112457889999999999997543 347777766
Q ss_pred cC
Q 021854 285 NG 286 (306)
Q Consensus 285 ~g 286 (306)
+|
T Consensus 243 gg 244 (248)
T TIGR01832 243 GG 244 (248)
T ss_pred CC
Confidence 55
|
This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation. |
| >PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.5e-14 Score=129.34 Aligned_cols=187 Identities=14% Similarity=0.088 Sum_probs=126.1
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcC-------ccEEEE
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRG-------VRSIIC 169 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~-------~d~vi~ 169 (306)
..+++++||||+|+||+.++++|+++|++|+++.|+. ....+..+.++.+|+.|.+++.+++++ +|++||
T Consensus 6 ~~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~---~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~ 82 (252)
T PRK08220 6 FSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF---LTQEDYPFATFVLDVSDAAAVAQVCQRLLAETGPLDVLVN 82 (252)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch---hhhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 3468999999999999999999999999999999987 122345688999999999988887754 699999
Q ss_pred cCCch--------------------------hhhc----ccccCCCEEEEecCcccccCCCCcccccchHHHH--HHHHH
Q 021854 170 PSEGF--------------------------ISNA----GSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK--LAEQD 217 (306)
Q Consensus 170 ~~~g~--------------------------~~~~----a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~--~~~~a 217 (306)
+++.. +.++ ..+.+.++||++||.....+..+...|..+++.. +.+..
T Consensus 83 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~~l 162 (252)
T PRK08220 83 AAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGSNAAHVPRIGMAAYGASKAALTSLAKCV 162 (252)
T ss_pred CCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECCchhccCCCCCchhHHHHHHHHHHHHHH
Confidence 83311 1111 2234567899999988766655556665544321 11222
Q ss_pred HHHHHhcCCCEEEEEcCcccCCCCC--------Ccce------eeecCCCCccccCHHHHHHHHHHHhhCC--CCCCcEE
Q 021854 218 ESMLMASGIPYTIIRTGVLQNTPGG--------KQGF------QFEEGCAANGSLSKEDAAFICVEALESI--PQTGLIF 281 (306)
Q Consensus 218 E~~l~~sgi~~tiiRPg~l~~~~~~--------~~~~------~~~~g~~~~~~Is~~DVA~~iv~aL~~~--~~~g~~~ 281 (306)
...+...++++++++||.+...... .... .+........+++++|+|++++.++.+. ...++++
T Consensus 163 a~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~i 242 (252)
T PRK08220 163 GLELAPYGVRCNVVSPGSTDTDMQRTLWVDEDGEQQVIAGFPEQFKLGIPLGKIARPQEIANAVLFLASDLASHITLQDI 242 (252)
T ss_pred HHHhhHhCeEEEEEecCcCcchhhhhhccchhhhhhhhhhHHHHHhhcCCCcccCCHHHHHHHHHHHhcchhcCccCcEE
Confidence 2223347899999999986432110 0000 0011122345788999999999988654 3457777
Q ss_pred EEecC
Q 021854 282 EVVNG 286 (306)
Q Consensus 282 ~v~~g 286 (306)
.+.+|
T Consensus 243 ~~~gg 247 (252)
T PRK08220 243 VVDGG 247 (252)
T ss_pred EECCC
Confidence 77765
|
|
| >PRK07478 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=1.4e-14 Score=129.86 Aligned_cols=189 Identities=16% Similarity=0.115 Sum_probs=125.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh------cCCCceeeeccCCCHHHHHHHhc-------Cc
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GV 164 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~~~-------~~ 164 (306)
++++++||||+|+||.+++++|+++|++|++++|+.++..+. .+.++.++.+|++|.++++++++ .+
T Consensus 5 ~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 84 (254)
T PRK07478 5 NGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERFGGL 84 (254)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence 468999999999999999999999999999999988763321 13457789999999988877765 57
Q ss_pred cEEEEcCCc-----h--------------------------hhhcccccCCCEEEEecCcccc-cCCCCcccccchHHHH
Q 021854 165 RSIICPSEG-----F--------------------------ISNAGSLKGVQHVILLSQLSVY-RGSGGIQALMKGNARK 212 (306)
Q Consensus 165 d~vi~~~~g-----~--------------------------~~~~a~~~gvkr~V~iSS~~~~-~~~~~~~~~~~~~a~~ 212 (306)
|++||+++. . +...+.+.+.+++|++||..++ .+..+...|..+++..
T Consensus 85 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~~Y~~sK~a~ 164 (254)
T PRK07478 85 DIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARGGGSLIFTSTFVGHTAGFPGMAAYAASKAGL 164 (254)
T ss_pred CEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEechHhhccCCCCcchhHHHHHHH
Confidence 999998431 0 0112334556789999998765 3444555665544322
Q ss_pred --HHHHHHHHHHhcCCCEEEEEcCcccCCCCCCc---ce---eeecCCCCccccCHHHHHHHHHHHhhCCC--CCCcEEE
Q 021854 213 --LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQ---GF---QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFE 282 (306)
Q Consensus 213 --~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~~---~~---~~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~~~ 282 (306)
+.+.....+...+++++.|+||++........ .. .+........+.+++|+|+.+++++.++. ..|+++.
T Consensus 165 ~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~~~ 244 (254)
T PRK07478 165 IGLTQVLAAEYGAQGIRVNALLPGGTDTPMGRAMGDTPEALAFVAGLHALKRMAQPEEIAQAALFLASDAASFVTGTALL 244 (254)
T ss_pred HHHHHHHHHHHhhcCEEEEEEeeCcccCcccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCCCCCeEE
Confidence 11111222334689999999999753321100 00 00000112335688999999999887543 3578888
Q ss_pred EecC
Q 021854 283 VVNG 286 (306)
Q Consensus 283 v~~g 286 (306)
+.+|
T Consensus 245 ~dgg 248 (254)
T PRK07478 245 VDGG 248 (254)
T ss_pred eCCc
Confidence 8755
|
|
| >PRK08265 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=1.5e-14 Score=130.70 Aligned_cols=189 Identities=17% Similarity=0.160 Sum_probs=125.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhh---hcCCCceeeeccCCCHHHHHHHhc-------CccEE
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALR-------GVRSI 167 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~---~~~~~v~~v~~D~~d~~~l~~~~~-------~~d~v 167 (306)
.+++++||||+|+||++++++|+++|++|+++.|+.++..+ ..+.++.++.+|++|.++++++++ .+|++
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~l 84 (261)
T PRK08265 5 AGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLGERARFIATDITDDAAIERAVATVVARFGRVDIL 84 (261)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeeEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 46899999999999999999999999999999998865332 234568899999999988877665 46999
Q ss_pred EEcCCch-------------------------h----hhcccccCCCEEEEecCcccccCCCCcccccchHHHH--HHHH
Q 021854 168 ICPSEGF-------------------------I----SNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK--LAEQ 216 (306)
Q Consensus 168 i~~~~g~-------------------------~----~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~--~~~~ 216 (306)
||+++.. + ...++ .+-.++|++||..+..+......|..+++.. +.+.
T Consensus 85 v~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~g~ii~isS~~~~~~~~~~~~Y~asKaa~~~~~~~ 163 (261)
T PRK08265 85 VNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLA-RGGGAIVNFTSISAKFAQTGRWLYPASKAAIRQLTRS 163 (261)
T ss_pred EECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHh-cCCcEEEEECchhhccCCCCCchhHHHHHHHHHHHHH
Confidence 9984310 0 11122 3346899999988776655666665543321 1122
Q ss_pred HHHHHHhcCCCEEEEEcCcccCCCC----CCccee---ee-cCCCCccccCHHHHHHHHHHHhhCCC--CCCcEEEEecC
Q 021854 217 DESMLMASGIPYTIIRTGVLQNTPG----GKQGFQ---FE-EGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVNG 286 (306)
Q Consensus 217 aE~~l~~sgi~~tiiRPg~l~~~~~----~~~~~~---~~-~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~~~v~~g 286 (306)
....+...+++++.|+||++..... ...... +. .......+.+++|+|++++.++.++. ..|+.+.+.+|
T Consensus 164 la~e~~~~gi~vn~v~PG~~~t~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~~~~l~s~~~~~~tG~~i~vdgg 243 (261)
T PRK08265 164 MAMDLAPDGIRVNSVSPGWTWSRVMDELSGGDRAKADRVAAPFHLLGRVGDPEEVAQVVAFLCSDAASFVTGADYAVDGG 243 (261)
T ss_pred HHHHhcccCEEEEEEccCCccChhhhhhcccchhHHHHhhcccCCCCCccCHHHHHHHHHHHcCccccCccCcEEEECCC
Confidence 2222334689999999998542211 000000 00 01112235678999999999997543 46788888776
Q ss_pred C
Q 021854 287 E 287 (306)
Q Consensus 287 ~ 287 (306)
-
T Consensus 244 ~ 244 (261)
T PRK08265 244 Y 244 (261)
T ss_pred e
Confidence 3
|
|
| >PRK07063 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=1.4e-14 Score=130.48 Aligned_cols=190 Identities=12% Similarity=0.046 Sum_probs=126.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh--------cCCCceeeeccCCCHHHHHHHhc-------
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES--------FGTYVESMAGDASNKKFLKTALR------- 162 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~--------~~~~v~~v~~D~~d~~~l~~~~~------- 162 (306)
.+++++||||+|+||++++++|+++|++|+++.|+.++..+. .+.++.++.+|++|.+++..+++
T Consensus 6 ~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 85 (260)
T PRK07063 6 AGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEAFG 85 (260)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 478999999999999999999999999999999987653321 13357789999999988877765
Q ss_pred CccEEEEcCCch--------------------------h----hhcccccCCCEEEEecCcccccCCCCcccccchHHHH
Q 021854 163 GVRSIICPSEGF--------------------------I----SNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK 212 (306)
Q Consensus 163 ~~d~vi~~~~g~--------------------------~----~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~ 212 (306)
.+|++||+++.. + ...+.+.+.+++|++||..+..+..+...|..+++..
T Consensus 86 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaa~ 165 (260)
T PRK07063 86 PLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIVNIASTHAFKIIPGCFPYPVAKHGL 165 (260)
T ss_pred CCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEEEEECChhhccCCCCchHHHHHHHHH
Confidence 579999984310 0 1112334567999999988776655555665543321
Q ss_pred --HHHHHHHHHHhcCCCEEEEEcCcccCCCCCC------cce-e---eecCCCCccccCHHHHHHHHHHHhhCCC--CCC
Q 021854 213 --LAEQDESMLMASGIPYTIIRTGVLQNTPGGK------QGF-Q---FEEGCAANGSLSKEDAAFICVEALESIP--QTG 278 (306)
Q Consensus 213 --~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~------~~~-~---~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g 278 (306)
+.+.....+...+|+++.|+||++....... ... . .........+..++|+|.++++++.+.. -.|
T Consensus 166 ~~~~~~la~el~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~va~~~~fl~s~~~~~itG 245 (260)
T PRK07063 166 LGLTRALGIEYAARNVRVNAIAPGYIETQLTEDWWNAQPDPAAARAETLALQPMKRIGRPEEVAMTAVFLASDEAPFINA 245 (260)
T ss_pred HHHHHHHHHHhCccCeEEEEEeeCCccChhhhhhhhccCChHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCccccccCC
Confidence 1122222233468999999999864322110 000 0 0000111235678999999999987643 457
Q ss_pred cEEEEecCC
Q 021854 279 LIFEVVNGE 287 (306)
Q Consensus 279 ~~~~v~~g~ 287 (306)
+.+.+.+|.
T Consensus 246 ~~i~vdgg~ 254 (260)
T PRK07063 246 TCITIDGGR 254 (260)
T ss_pred cEEEECCCe
Confidence 888887664
|
|
| >PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=1.5e-14 Score=130.13 Aligned_cols=191 Identities=14% Similarity=0.144 Sum_probs=127.1
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcch--hhhh---cCCCceeeeccCCCHHHHHHHhc-------C
Q 021854 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN--AMES---FGTYVESMAGDASNKKFLKTALR-------G 163 (306)
Q Consensus 96 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~--~~~~---~~~~v~~v~~D~~d~~~l~~~~~-------~ 163 (306)
...+++|+||||+|+||++++++|++.|++|+++.|+.+. +.+. .+.++.++.+|++|.++++.+++ .
T Consensus 12 ~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~ 91 (258)
T PRK06935 12 SLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHGTNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEFGK 91 (258)
T ss_pred cCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 3457999999999999999999999999999999988321 1111 23468899999999988887765 5
Q ss_pred ccEEEEcCCch------------------------------hhhcccccCCCEEEEecCcccccCCCCcccccchHHHH-
Q 021854 164 VRSIICPSEGF------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK- 212 (306)
Q Consensus 164 ~d~vi~~~~g~------------------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~- 212 (306)
+|++||+++.. ....+.+.+.+++|++||..++.+......|..+++..
T Consensus 92 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~ 171 (258)
T PRK06935 92 IDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIINIASMLSFQGGKFVPAYTASKHGVA 171 (258)
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEEEECCHHhccCCCCchhhHHHHHHHH
Confidence 79999984310 01123345567999999998876665555665543321
Q ss_pred -HHHHHHHHHHhcCCCEEEEEcCcccCCCCC----Ccce--eeecCCCCccccCHHHHHHHHHHHhhCCC--CCCcEEEE
Q 021854 213 -LAEQDESMLMASGIPYTIIRTGVLQNTPGG----KQGF--QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEV 283 (306)
Q Consensus 213 -~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~----~~~~--~~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~~~v 283 (306)
+.+.....+...+++++.|+||++...... .... ..........+..++|+|..+..++.+.. ..|+++.+
T Consensus 172 ~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~ 251 (258)
T PRK06935 172 GLTKAFANELAAYNIQVNAIAPGYIKTANTAPIRADKNRNDEILKRIPAGRWGEPDDLMGAAVFLASRASDYVNGHILAV 251 (258)
T ss_pred HHHHHHHHHhhhhCeEEEEEEeccccccchhhcccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHcChhhcCCCCCEEEE
Confidence 112222223346899999999986533211 0000 00011112346788999999999887543 35788888
Q ss_pred ecC
Q 021854 284 VNG 286 (306)
Q Consensus 284 ~~g 286 (306)
.+|
T Consensus 252 dgg 254 (258)
T PRK06935 252 DGG 254 (258)
T ss_pred CCC
Confidence 765
|
|
| >PRK12824 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=2e-14 Score=127.72 Aligned_cols=189 Identities=17% Similarity=0.100 Sum_probs=126.8
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcch-hh---hh---cCCCceeeeccCCCHHHHHHHhc-------Cc
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-AM---ES---FGTYVESMAGDASNKKFLKTALR-------GV 164 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~-~~---~~---~~~~v~~v~~D~~d~~~l~~~~~-------~~ 164 (306)
.++++||||+|+||++++++|+++|++|+++.|+... .. .. .+.++.++.+|+.|.+++.++++ .+
T Consensus 2 ~k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~i 81 (245)
T PRK12824 2 KKIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEGPV 81 (245)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 5799999999999999999999999999999998532 11 11 12358899999999988877664 47
Q ss_pred cEEEEcCCch------------------------------hhhcccccCCCEEEEecCcccccCCCCcccccchHHHH--
Q 021854 165 RSIICPSEGF------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK-- 212 (306)
Q Consensus 165 d~vi~~~~g~------------------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~-- 212 (306)
|++||+++.. +.+.+++.+.++||++||..++.+..+...|..+++..
T Consensus 82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~Y~~sK~a~~~ 161 (245)
T PRK12824 82 DILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQGYGRIINISSVNGLKGQFGQTNYSAAKAGMIG 161 (245)
T ss_pred CEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEECChhhccCCCCChHHHHHHHHHHH
Confidence 9999984311 11223445678999999988876655555565443311
Q ss_pred HHHHHHHHHHhcCCCEEEEEcCcccCCCCCC-ccee---eecCCCCccccCHHHHHHHHHHHhhCCC--CCCcEEEEecC
Q 021854 213 LAEQDESMLMASGIPYTIIRTGVLQNTPGGK-QGFQ---FEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVNG 286 (306)
Q Consensus 213 ~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~-~~~~---~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~~~v~~g 286 (306)
+.+.....+...++++++++||++....... .... +..........+.+|+|+++..++.... ..|+++++.+|
T Consensus 162 ~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~~~~~~g 241 (245)
T PRK12824 162 FTKALASEGARYGITVNCIAPGYIATPMVEQMGPEVLQSIVNQIPMKRLGTPEEIAAAVAFLVSEAAGFITGETISINGG 241 (245)
T ss_pred HHHHHHHHHHHhCeEEEEEEEcccCCcchhhcCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCccccCccCcEEEECCC
Confidence 1222222345678999999999975432211 0000 0111122345688999999988886533 45889999876
Q ss_pred C
Q 021854 287 E 287 (306)
Q Consensus 287 ~ 287 (306)
.
T Consensus 242 ~ 242 (245)
T PRK12824 242 L 242 (245)
T ss_pred e
Confidence 4
|
|
| >PRK07577 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=3.1e-14 Score=125.80 Aligned_cols=182 Identities=15% Similarity=0.115 Sum_probs=120.7
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhc------CccEEEEcCC
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR------GVRSIICPSE 172 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~------~~d~vi~~~~ 172 (306)
+++|+||||+|+||++++++|+++|++|+++.|+.++. . ..+++.+|++|.++++++++ ++|++||+++
T Consensus 3 ~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~~---~--~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~ag 77 (234)
T PRK07577 3 SRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAIDD---F--PGELFACDLADIEQTAATLAQINEIHPVDAIVNNVG 77 (234)
T ss_pred CCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCcccc---c--CceEEEeeCCCHHHHHHHHHHHHHhCCCcEEEECCC
Confidence 58999999999999999999999999999999987651 1 23678999999988877775 5799999833
Q ss_pred ch------------------------------hhhcccccCCCEEEEecCcccccCCCCcccccchHHHH--HHHHHHHH
Q 021854 173 GF------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK--LAEQDESM 220 (306)
Q Consensus 173 g~------------------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~--~~~~aE~~ 220 (306)
.. +...+++.+.++||++||...+. ......|..+++.. +.+.....
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~-~~~~~~Y~~sK~a~~~~~~~~a~e 156 (234)
T PRK07577 78 IALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQGRIVNICSRAIFG-ALDRTSYSAAKSALVGCTRTWALE 156 (234)
T ss_pred CCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccccccC-CCCchHHHHHHHHHHHHHHHHHHH
Confidence 10 11223456778999999987543 33344554433221 11122223
Q ss_pred HHhcCCCEEEEEcCcccCCCCCCc-ce------eeecCCCCccccCHHHHHHHHHHHhhCCC--CCCcEEEEecC
Q 021854 221 LMASGIPYTIIRTGVLQNTPGGKQ-GF------QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVNG 286 (306)
Q Consensus 221 l~~sgi~~tiiRPg~l~~~~~~~~-~~------~~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~~~v~~g 286 (306)
+...++++++||||.+........ .. .............++|+|.+++.++.++. ..|+.+.+.++
T Consensus 157 ~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~~g~ 231 (234)
T PRK07577 157 LAEYGITVNAVAPGPIETELFRQTRPVGSEEEKRVLASIPMRRLGTPEEVAAAIAFLLSDDAGFITGQVLGVDGG 231 (234)
T ss_pred HHhhCcEEEEEecCcccCcccccccccchhHHHHHhhcCCCCCCcCHHHHHHHHHHHhCcccCCccceEEEecCC
Confidence 445799999999998653321100 00 00001111223478999999999997653 45778887765
|
|
| >PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=3.7e-14 Score=126.99 Aligned_cols=190 Identities=16% Similarity=0.136 Sum_probs=123.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcch-hh---h---hcCCCceeeeccCCCHHHHHHHhc-------C
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-AM---E---SFGTYVESMAGDASNKKFLKTALR-------G 163 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~-~~---~---~~~~~v~~v~~D~~d~~~l~~~~~-------~ 163 (306)
|.++++||||+|+||++++++|+++|++|+++.|+... .. + ..+.++.++.+|++|.+++.++++ .
T Consensus 1 ~~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (256)
T PRK12745 1 MRPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWGR 80 (256)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcCC
Confidence 35889999999999999999999999999999987532 11 1 123468899999999888776654 5
Q ss_pred ccEEEEcCCc-------h---------------------hhhc----ccc-cC-----CCEEEEecCcccccCCCCcccc
Q 021854 164 VRSIICPSEG-------F---------------------ISNA----GSL-KG-----VQHVILLSQLSVYRGSGGIQAL 205 (306)
Q Consensus 164 ~d~vi~~~~g-------~---------------------~~~~----a~~-~g-----vkr~V~iSS~~~~~~~~~~~~~ 205 (306)
+|++||+++. . +.++ ..+ .+ +++||++||..+..+..+...|
T Consensus 81 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y 160 (256)
T PRK12745 81 IDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMVSPNRGEY 160 (256)
T ss_pred CCEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhccCCCCCccc
Confidence 6999998431 0 0011 111 11 6789999998887666666666
Q ss_pred cchHHHHH--HHHHHHHHHhcCCCEEEEEcCcccCCCCCC--cce--eeecCC-CCccccCHHHHHHHHHHHhhCCC--C
Q 021854 206 MKGNARKL--AEQDESMLMASGIPYTIIRTGVLQNTPGGK--QGF--QFEEGC-AANGSLSKEDAAFICVEALESIP--Q 276 (306)
Q Consensus 206 ~~~~a~~~--~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~--~~~--~~~~g~-~~~~~Is~~DVA~~iv~aL~~~~--~ 276 (306)
..+++... .+.....+...++++++||||.+....... ... .+..+. ....+.+++|+|+++..++.... .
T Consensus 161 ~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~i~~l~~~~~~~~ 240 (256)
T PRK12745 161 CISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTDMTAPVTAKYDALIAKGLVPMPRWGEPEDVARAVAALASGDLPYS 240 (256)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCccccccchhHHhhhhhcCCCcCCCcCHHHHHHHHHHHhCCccccc
Confidence 55433221 122222234578999999999865332111 000 000111 11235688999999998886432 3
Q ss_pred CCcEEEEecCC
Q 021854 277 TGLIFEVVNGE 287 (306)
Q Consensus 277 ~g~~~~v~~g~ 287 (306)
.|+.|++.++.
T Consensus 241 ~G~~~~i~gg~ 251 (256)
T PRK12745 241 TGQAIHVDGGL 251 (256)
T ss_pred CCCEEEECCCe
Confidence 57899998764
|
|
| >PRK07102 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=1.6e-14 Score=128.72 Aligned_cols=170 Identities=14% Similarity=0.110 Sum_probs=117.8
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh-------cCCCceeeeccCCCHHHHHHHhcC----ccEE
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------FGTYVESMAGDASNKKFLKTALRG----VRSI 167 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~-------~~~~v~~v~~D~~d~~~l~~~~~~----~d~v 167 (306)
+|+|+||||+|+||+++++.|+++|++|++++|+.++..+. ...+++++.+|++|.++++++++. +|++
T Consensus 1 ~~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~d~v 80 (243)
T PRK07102 1 MKKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLPALPDIV 80 (243)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhhcCCEE
Confidence 46899999999999999999999999999999998764321 124788999999999888877654 5999
Q ss_pred EEcCCch------------------------------hhhcccccCCCEEEEecCcccccCCCCcccccchHHHH--HHH
Q 021854 168 ICPSEGF------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK--LAE 215 (306)
Q Consensus 168 i~~~~g~------------------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~--~~~ 215 (306)
||+++.. +...+.+.+.++||++||..+..+......|..+++.. +.+
T Consensus 81 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~ 160 (243)
T PRK07102 81 LIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSVAGDRGRASNYVYGSAKAALTAFLS 160 (243)
T ss_pred EECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEecccccCCCCCCcccHHHHHHHHHHHH
Confidence 9874311 01112335678999999987765555555565433321 112
Q ss_pred HHHHHHHhcCCCEEEEEcCcccCCCCCCcceeeecCCCCccccCHHHHHHHHHHHhhCC
Q 021854 216 QDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESI 274 (306)
Q Consensus 216 ~aE~~l~~sgi~~tiiRPg~l~~~~~~~~~~~~~~g~~~~~~Is~~DVA~~iv~aL~~~ 274 (306)
.....+...+++++.|+||.+........ .+ .....++++|+|+.++.++..+
T Consensus 161 ~l~~el~~~gi~v~~v~pg~v~t~~~~~~--~~----~~~~~~~~~~~a~~i~~~~~~~ 213 (243)
T PRK07102 161 GLRNRLFKSGVHVLTVKPGFVRTPMTAGL--KL----PGPLTAQPEEVAKDIFRAIEKG 213 (243)
T ss_pred HHHHHhhccCcEEEEEecCcccChhhhcc--CC----CccccCCHHHHHHHHHHHHhCC
Confidence 22222456799999999998654321111 11 1234688999999999999854
|
|
| >PRK07109 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=1.7e-14 Score=135.36 Aligned_cols=185 Identities=11% Similarity=0.054 Sum_probs=123.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh------cCCCceeeeccCCCHHHHHHHhc-------Cc
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GV 164 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~~~-------~~ 164 (306)
.+++|+||||+|+||++++++|+++|++|+++.|+.++..+. .+.++.++.+|++|.++++++++ .+
T Consensus 7 ~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~g~i 86 (334)
T PRK07109 7 GRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEELGPI 86 (334)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHCCCC
Confidence 468999999999999999999999999999999988664321 23467889999999998887654 57
Q ss_pred cEEEEcCCch------------------------------hhhcccccCCCEEEEecCcccccCCCCcccccchHHHH--
Q 021854 165 RSIICPSEGF------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK-- 212 (306)
Q Consensus 165 d~vi~~~~g~------------------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~-- 212 (306)
|++||+++.. +...+.+.+.++||++||..++.+......|..+++..
T Consensus 87 D~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~asK~a~~~ 166 (334)
T PRK07109 87 DTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALAYRSIPLQSAYCAAKHAIRG 166 (334)
T ss_pred CEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCChhhccCCCcchHHHHHHHHHHH
Confidence 9999984310 11223445568999999998887666656665443321
Q ss_pred HHHHHHHHHH--hcCCCEEEEEcCcccCCCC-CCcceeeecCCCCccccCHHHHHHHHHHHhhCCCCCCcEEEEec
Q 021854 213 LAEQDESMLM--ASGIPYTIIRTGVLQNTPG-GKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVVN 285 (306)
Q Consensus 213 ~~~~aE~~l~--~sgi~~tiiRPg~l~~~~~-~~~~~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~~~g~~~~v~~ 285 (306)
+.+.....+. ..+|.+++|+||.+..... .................+++|+|+++++++.++ .+.+.+..
T Consensus 167 ~~~~l~~el~~~~~~I~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~pe~vA~~i~~~~~~~---~~~~~vg~ 239 (334)
T PRK07109 167 FTDSLRCELLHDGSPVSVTMVQPPAVNTPQFDWARSRLPVEPQPVPPIYQPEVVADAILYAAEHP---RRELWVGG 239 (334)
T ss_pred HHHHHHHHHhhcCCCeEEEEEeCCCccCchhhhhhhhccccccCCCCCCCHHHHHHHHHHHHhCC---CcEEEeCc
Confidence 1111111122 2579999999998653211 100000001111234578999999999999876 34566654
|
|
| >PRK05866 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=2.7e-14 Score=131.59 Aligned_cols=174 Identities=15% Similarity=0.120 Sum_probs=117.7
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh------cCCCceeeeccCCCHHHHHHHhc-------
Q 021854 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR------- 162 (306)
Q Consensus 96 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~~~------- 162 (306)
...+++|+||||+|+||++++++|+++|++|+++.|+.+++++. .+..+.++.+|+.|.+++.++++
T Consensus 37 ~~~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g 116 (293)
T PRK05866 37 DLTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRIG 116 (293)
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 34568999999999999999999999999999999998664322 13357789999999998888776
Q ss_pred CccEEEEcCCch--------------------------------hhhcccccCCCEEEEecCcccccC-CCCcccccchH
Q 021854 163 GVRSIICPSEGF--------------------------------ISNAGSLKGVQHVILLSQLSVYRG-SGGIQALMKGN 209 (306)
Q Consensus 163 ~~d~vi~~~~g~--------------------------------~~~~a~~~gvkr~V~iSS~~~~~~-~~~~~~~~~~~ 209 (306)
.+|++||+++.. +...+.+.+.+++|++||.+++.. ......|..++
T Consensus 117 ~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~p~~~~Y~asK 196 (293)
T PRK05866 117 GVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERGDGHIINVATWGVLSEASPLFSVYNASK 196 (293)
T ss_pred CCCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCCCCCcchHHHHH
Confidence 679999984311 001123456789999999766542 33344554433
Q ss_pred HHH--HHHHHHHHHHhcCCCEEEEEcCcccCCCCCCcceeeecCCCCccccCHHHHHHHHHHHhhCC
Q 021854 210 ARK--LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESI 274 (306)
Q Consensus 210 a~~--~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~~~~~~~~g~~~~~~Is~~DVA~~iv~aL~~~ 274 (306)
+.. +.+.....+...+++++.++||.+........ ... .....++++++|+.++.++++.
T Consensus 197 aal~~l~~~la~e~~~~gI~v~~v~pg~v~T~~~~~~-~~~----~~~~~~~pe~vA~~~~~~~~~~ 258 (293)
T PRK05866 197 AALSAVSRVIETEWGDRGVHSTTLYYPLVATPMIAPT-KAY----DGLPALTADEAAEWMVTAARTR 258 (293)
T ss_pred HHHHHHHHHHHHHhcccCcEEEEEEcCcccCcccccc-ccc----cCCCCCCHHHHHHHHHHHHhcC
Confidence 221 11222222345689999999997653322111 000 1123579999999999999864
|
|
| >PRK08267 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=1e-14 Score=131.23 Aligned_cols=176 Identities=14% Similarity=0.044 Sum_probs=117.4
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh---c-CCCceeeeccCCCHHHHHHHhc--------CccE
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---F-GTYVESMAGDASNKKFLKTALR--------GVRS 166 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~---~-~~~v~~v~~D~~d~~~l~~~~~--------~~d~ 166 (306)
+|+++||||+|+||++++++|+++|++|+++.|+.++..+. . +.++.++.+|++|.+++.++++ .+|+
T Consensus 1 mk~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id~ 80 (260)
T PRK08267 1 MKSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATGGRLDV 80 (260)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCCE
Confidence 37899999999999999999999999999999998764432 1 2468899999999988877655 4599
Q ss_pred EEEcCCch--------------------------hhh----cccccCCCEEEEecCcccccCCCCcccccchHHHHH--H
Q 021854 167 IICPSEGF--------------------------ISN----AGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKL--A 214 (306)
Q Consensus 167 vi~~~~g~--------------------------~~~----~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~~--~ 214 (306)
|||+++.. +.. .++..+..+||++||..+..+......|..+++... .
T Consensus 81 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sKaa~~~~~ 160 (260)
T PRK08267 81 LFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSSASAIYGQPGLAVYSATKFAVRGLT 160 (260)
T ss_pred EEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCchhhCcCCCCchhhHHHHHHHHHHH
Confidence 99984311 111 123345689999999877666555556654433211 1
Q ss_pred HHHHHHHHhcCCCEEEEEcCcccCCCCCC--cceeeecCCCCccccCHHHHHHHHHHHhhCC
Q 021854 215 EQDESMLMASGIPYTIIRTGVLQNTPGGK--QGFQFEEGCAANGSLSKEDAAFICVEALESI 274 (306)
Q Consensus 215 ~~aE~~l~~sgi~~tiiRPg~l~~~~~~~--~~~~~~~g~~~~~~Is~~DVA~~iv~aL~~~ 274 (306)
+.....+...++++++|+||++....... ..............++++|+|++++.++.++
T Consensus 161 ~~l~~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~~~~~~ 222 (260)
T PRK08267 161 EALDLEWRRHGIRVADVMPLFVDTAMLDGTSNEVDAGSTKRLGVRLTPEDVAEAVWAAVQHP 222 (260)
T ss_pred HHHHHHhcccCcEEEEEecCCcCCcccccccchhhhhhHhhccCCCCHHHHHHHHHHHHhCC
Confidence 11111233468999999999975432211 0000000011123578899999999999754
|
|
| >PRK08264 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.63 E-value=2.5e-14 Score=126.83 Aligned_cols=168 Identities=15% Similarity=0.175 Sum_probs=119.2
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhc---CccEEEEcCC
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR---GVRSIICPSE 172 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~---~~d~vi~~~~ 172 (306)
..+++|+||||+|+||++++++|+++|+ +|+++.|+.++..+ .+.+++++.+|+.|.++++++++ .+|+|||+++
T Consensus 4 ~~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag 82 (238)
T PRK08264 4 IKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD-LGPRVVPLQLDVTDPASVAAAAEAASDVTILVNNAG 82 (238)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh-cCCceEEEEecCCCHHHHHHHHHhcCCCCEEEECCC
Confidence 3468999999999999999999999999 99999999877544 44578899999999999888776 4799999843
Q ss_pred c-h--------------------------hhhc----ccccCCCEEEEecCcccccCCCCcccccchHHHHH--HHHHHH
Q 021854 173 G-F--------------------------ISNA----GSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKL--AEQDES 219 (306)
Q Consensus 173 g-~--------------------------~~~~----a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~~--~~~aE~ 219 (306)
. . +.++ ++..+.++||++||...+.+......|..+++... .+....
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~~~~~y~~sK~a~~~~~~~l~~ 162 (238)
T PRK08264 83 IFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVLSWVNFPNLGTYSASKAAAWSLTQALRA 162 (238)
T ss_pred cCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhccCCCCchHhHHHHHHHHHHHHHHHH
Confidence 2 1 0111 22356788999999887766555555644332211 111112
Q ss_pred HHHhcCCCEEEEEcCcccCCCCCCcceeeecCCCCccccCHHHHHHHHHHHhhCC
Q 021854 220 MLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESI 274 (306)
Q Consensus 220 ~l~~sgi~~tiiRPg~l~~~~~~~~~~~~~~g~~~~~~Is~~DVA~~iv~aL~~~ 274 (306)
.+...+++++++|||.+........ ....++.+|+|+.++..+...
T Consensus 163 ~~~~~~i~~~~v~pg~v~t~~~~~~---------~~~~~~~~~~a~~~~~~~~~~ 208 (238)
T PRK08264 163 ELAPQGTRVLGVHPGPIDTDMAAGL---------DAPKASPADVARQILDALEAG 208 (238)
T ss_pred HhhhcCeEEEEEeCCcccccccccC---------CcCCCCHHHHHHHHHHHHhCC
Confidence 2334689999999998643321110 112688999999999998754
|
|
| >PRK06124 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=2.9e-14 Score=127.90 Aligned_cols=191 Identities=13% Similarity=0.106 Sum_probs=128.4
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhh------hcCCCceeeeccCCCHHHHHHHhc-------C
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTALR-------G 163 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~------~~~~~v~~v~~D~~d~~~l~~~~~-------~ 163 (306)
..+++|+||||+|+||++++++|+++|++|+++.|+.+...+ ..+.++.++.+|++|.+++..+++ .
T Consensus 9 ~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 88 (256)
T PRK06124 9 LAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAEHGR 88 (256)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCC
Confidence 457999999999999999999999999999999998765322 123468899999999988877765 3
Q ss_pred ccEEEEcCCch--------------------------h----hhcccccCCCEEEEecCcccccCCCCcccccchHHHH-
Q 021854 164 VRSIICPSEGF--------------------------I----SNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK- 212 (306)
Q Consensus 164 ~d~vi~~~~g~--------------------------~----~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~- 212 (306)
+|++||+++.. + .+.+.+.+.++||++||..+..+..+...|..+++..
T Consensus 89 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~ 168 (256)
T PRK06124 89 LDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYGRIIAITSIAGQVARAGDAVYPAAKQGLT 168 (256)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEeechhccCCCCccHhHHHHHHHH
Confidence 58999884310 0 1223345678999999988766555555665543321
Q ss_pred -HHHHHHHHHHhcCCCEEEEEcCcccCCCCCCc----ce--eeecCCCCccccCHHHHHHHHHHHhhCCC--CCCcEEEE
Q 021854 213 -LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQ----GF--QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEV 283 (306)
Q Consensus 213 -~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~~----~~--~~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~~~v 283 (306)
+.+.....+...+++++.|+||.+........ .. .+........+++++|+|++++.++.++. ..|+.+.+
T Consensus 169 ~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~G~~i~~ 248 (256)
T PRK06124 169 GLMRALAAEFGPHGITSNAIAPGYFATETNAAMAADPAVGPWLAQRTPLGRWGRPEEIAGAAVFLASPAASYVNGHVLAV 248 (256)
T ss_pred HHHHHHHHHHHHhCcEEEEEEECCccCcchhhhccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCcccCCcCCCEEEE
Confidence 11222222344689999999998654321100 00 00011122457889999999999997654 35777777
Q ss_pred ecCC
Q 021854 284 VNGE 287 (306)
Q Consensus 284 ~~g~ 287 (306)
.+|.
T Consensus 249 dgg~ 252 (256)
T PRK06124 249 DGGY 252 (256)
T ss_pred CCCc
Confidence 6653
|
|
| >PLN02503 fatty acyl-CoA reductase 2 | Back alignment and domain information |
|---|
Probab=99.62 E-value=3e-14 Score=142.37 Aligned_cols=203 Identities=14% Similarity=0.167 Sum_probs=136.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCC---eEEEEecCcch------hh-hh------------c--------CCCceee
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRT---RIKALVKDKRN------AM-ES------------F--------GTYVESM 147 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~---~V~~l~R~~~~------~~-~~------------~--------~~~v~~v 147 (306)
.+++|+|||||||||+.++++|++.+. +|++++|.... .. +. . ..++.++
T Consensus 118 ~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~v 197 (605)
T PLN02503 118 RGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVPV 197 (605)
T ss_pred cCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEEE
Confidence 579999999999999999999998764 67999997642 11 10 0 1358889
Q ss_pred eccCCCH------HHHHHHhcCccEEEEcCCch-------------------hhhccccc-CCCEEEEecCcccccCCCC
Q 021854 148 AGDASNK------KFLKTALRGVRSIICPSEGF-------------------ISNAGSLK-GVQHVILLSQLSVYRGSGG 201 (306)
Q Consensus 148 ~~D~~d~------~~l~~~~~~~d~vi~~~~g~-------------------~~~~a~~~-gvkr~V~iSS~~~~~~~~~ 201 (306)
.+|++++ +..+.+.+++|+|||+++.. +.+++.+. ++++||++||..++....+
T Consensus 198 ~GDl~d~~LGLs~~~~~~L~~~vDiVIH~AA~v~f~~~~~~a~~vNV~GT~nLLelA~~~~~lk~fV~vSTayVyG~~~G 277 (605)
T PLN02503 198 VGNVCESNLGLEPDLADEIAKEVDVIINSAANTTFDERYDVAIDINTRGPCHLMSFAKKCKKLKLFLQVSTAYVNGQRQG 277 (605)
T ss_pred EeeCCCcccCCCHHHHHHHHhcCCEEEECccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCCeEEEccCceeecCCCC
Confidence 9999986 45677778899999984311 34556554 5789999999887753210
Q ss_pred c---cccc-------------------------------------------------------------chHHHHHHHHH
Q 021854 202 I---QALM-------------------------------------------------------------KGNARKLAEQD 217 (306)
Q Consensus 202 ~---~~~~-------------------------------------------------------------~~~a~~~~~~a 217 (306)
. ..|. +..+...|..+
T Consensus 278 ~i~E~~y~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~d~~~~~~~~~~~~~~l~~~g~~~~~~~~~pNtYt~TK~lA 357 (605)
T PLN02503 278 RIMEKPFRMGDCIARELGISNSLPHNRPALDIEAEIKLALDSKRHGFQSNSFAQKMKDLGLERAKLYGWQDTYVFTKAMG 357 (605)
T ss_pred eeeeeecCcccccccccccccccccccccCCHHHHHHHHHHhhhcccchHHHHHHhhhcccchhhhCCCCChHHHHHHHH
Confidence 0 0010 01223345678
Q ss_pred HHHHHh--cCCCEEEEEcCcccCC-----CCCCc--------------c---eeeecCCCCccccCHHHHHHHHHHHhhC
Q 021854 218 ESMLMA--SGIPYTIIRTGVLQNT-----PGGKQ--------------G---FQFEEGCAANGSLSKEDAAFICVEALES 273 (306)
Q Consensus 218 E~~l~~--sgi~~tiiRPg~l~~~-----~~~~~--------------~---~~~~~g~~~~~~Is~~DVA~~iv~aL~~ 273 (306)
|..+++ .+++++|+||+.+... +++.. + ..+..++.....|++|.|+.+++.+...
T Consensus 358 E~lV~~~~~~LPv~IvRPsiV~st~~eP~pGw~d~~~~~~p~~~~~g~G~lr~~~~~~~~~~DiVPVD~vvna~i~a~a~ 437 (605)
T PLN02503 358 EMVINSMRGDIPVVIIRPSVIESTWKDPFPGWMEGNRMMDPIVLYYGKGQLTGFLADPNGVLDVVPADMVVNATLAAMAK 437 (605)
T ss_pred HHHHHHhcCCCCEEEEcCCEecccccCCccccccCccccchhhhheeccceeEEEeCCCeeEeEEeecHHHHHHHHHHHh
Confidence 888875 4799999999986321 11111 1 0112344456789999999999998432
Q ss_pred -C---CCCCcEEEEecC---CcCHHHHHHHHHHH
Q 021854 274 -I---PQTGLIFEVVNG---EEKVSDWKKCFSRL 300 (306)
Q Consensus 274 -~---~~~g~~~~v~~g---~~s~~d~~~l~~~l 300 (306)
. ...+++||++++ +.++.++.+.+.+.
T Consensus 438 ~~~~~~~~~~vYn~ts~~~nP~t~~~~~~~~~~~ 471 (605)
T PLN02503 438 HGGAAKPEINVYQIASSVVNPLVFQDLARLLYEH 471 (605)
T ss_pred hhcccCCCCCEEEeCCCCCCCeEHHHHHHHHHHH
Confidence 1 224689999986 34788888876653
|
|
| >PRK06523 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=2.4e-14 Score=128.75 Aligned_cols=189 Identities=16% Similarity=0.179 Sum_probs=125.6
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHh-------cCccEEEE
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTAL-------RGVRSIIC 169 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~-------~~~d~vi~ 169 (306)
..+++|+||||+|+||++++++|+++|++|+++.|+.+.. .+..+.++.+|+.|.+++++++ ..+|++||
T Consensus 7 ~~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~ 83 (260)
T PRK06523 7 LAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDD---LPEGVEFVAADLTTAEGCAAVARAVLERLGGVDILVH 83 (260)
T ss_pred CCCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhh---cCCceeEEecCCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 4579999999999999999999999999999999987542 3346888999999988776554 35799999
Q ss_pred cCCch--------------------------------hhhcccccCCCEEEEecCcccccCCC-CcccccchHHHH--HH
Q 021854 170 PSEGF--------------------------------ISNAGSLKGVQHVILLSQLSVYRGSG-GIQALMKGNARK--LA 214 (306)
Q Consensus 170 ~~~g~--------------------------------~~~~a~~~gvkr~V~iSS~~~~~~~~-~~~~~~~~~a~~--~~ 214 (306)
+++.. +...+.+.+.+++|++||..++.+.. ....|..+++.. +.
T Consensus 84 ~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~~Y~~sK~a~~~l~ 163 (260)
T PRK06523 84 VLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARGSGVIIHVTSIQRRLPLPESTTAYAAAKAALSTYS 163 (260)
T ss_pred CCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEecccccCCCCCCcchhHHHHHHHHHHH
Confidence 84310 01112345567899999988765533 445565443321 11
Q ss_pred HHHHHHHHhcCCCEEEEEcCcccCCCCCC--------cceeee----------cCCCCccccCHHHHHHHHHHHhhCC--
Q 021854 215 EQDESMLMASGIPYTIIRTGVLQNTPGGK--------QGFQFE----------EGCAANGSLSKEDAAFICVEALESI-- 274 (306)
Q Consensus 215 ~~aE~~l~~sgi~~tiiRPg~l~~~~~~~--------~~~~~~----------~g~~~~~~Is~~DVA~~iv~aL~~~-- 274 (306)
+.....+...++++++|+||++....... ...... .+.....+..++|+|++++.++.+.
T Consensus 164 ~~~a~~~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~~~~~l~s~~~~ 243 (260)
T PRK06523 164 KSLSKEVAPKGVRVNTVSPGWIETEAAVALAERLAEAAGTDYEGAKQIIMDSLGGIPLGRPAEPEEVAELIAFLASDRAA 243 (260)
T ss_pred HHHHHHHhhcCcEEEEEecCcccCccHHHHHHHHHhhcCCCHHHHHHHHHHHhccCccCCCCCHHHHHHHHHHHhCcccc
Confidence 22222344578999999999865332100 000000 0011123567899999999999754
Q ss_pred CCCCcEEEEecCCc
Q 021854 275 PQTGLIFEVVNGEE 288 (306)
Q Consensus 275 ~~~g~~~~v~~g~~ 288 (306)
...|+.+.+.+|..
T Consensus 244 ~~~G~~~~vdgg~~ 257 (260)
T PRK06523 244 SITGTEYVIDGGTV 257 (260)
T ss_pred cccCceEEecCCcc
Confidence 34578899887753
|
|
| >PRK06128 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=4.1e-14 Score=130.59 Aligned_cols=191 Identities=16% Similarity=0.180 Sum_probs=126.1
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcch--h---h---hhcCCCceeeeccCCCHHHHHHHhc------
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN--A---M---ESFGTYVESMAGDASNKKFLKTALR------ 162 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~--~---~---~~~~~~v~~v~~D~~d~~~l~~~~~------ 162 (306)
..+|++|||||+|+||++++++|+++|++|++..|+.+. . . ...+.++.++.+|++|.++++++++
T Consensus 53 l~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 132 (300)
T PRK06128 53 LQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKEL 132 (300)
T ss_pred cCCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHHh
Confidence 446899999999999999999999999999988775432 1 1 1123467789999999988777664
Q ss_pred -CccEEEEcCCch---------------------------hhhcccc--cCCCEEEEecCcccccCCCCcccccchHHHH
Q 021854 163 -GVRSIICPSEGF---------------------------ISNAGSL--KGVQHVILLSQLSVYRGSGGIQALMKGNARK 212 (306)
Q Consensus 163 -~~d~vi~~~~g~---------------------------~~~~a~~--~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~ 212 (306)
++|++||+++.. +.+++.. ..-.+||++||..++.+......|..+++..
T Consensus 133 g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~asK~a~ 212 (300)
T PRK06128 133 GGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQSYQPSPTLLDYASTKAAI 212 (300)
T ss_pred CCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCccccCCCCCchhHHHHHHHH
Confidence 579999984310 1111111 1225899999998887766666675544321
Q ss_pred --HHHHHHHHHHhcCCCEEEEEcCcccCCCCCCcc---e---eeecCCCCccccCHHHHHHHHHHHhhCCC--CCCcEEE
Q 021854 213 --LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQG---F---QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFE 282 (306)
Q Consensus 213 --~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~~~---~---~~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~~~ 282 (306)
+.+.....+...||++++|+||++......... . .+........+..++|+|.+++.++.+.. ..|++|+
T Consensus 213 ~~~~~~la~el~~~gI~v~~v~PG~i~t~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~~~~l~s~~~~~~~G~~~~ 292 (300)
T PRK06128 213 VAFTKALAKQVAEKGIRVNAVAPGPVWTPLQPSGGQPPEKIPDFGSETPMKRPGQPVEMAPLYVLLASQESSYVTGEVFG 292 (300)
T ss_pred HHHHHHHHHHhhhcCcEEEEEEECcCcCCCcccCCCCHHHHHHHhcCCCCCCCcCHHHHHHHHHHHhCccccCccCcEEe
Confidence 122222234457999999999986533211100 0 01111222345688999999999887543 3588999
Q ss_pred EecCC
Q 021854 283 VVNGE 287 (306)
Q Consensus 283 v~~g~ 287 (306)
+.+|.
T Consensus 293 v~gg~ 297 (300)
T PRK06128 293 VTGGL 297 (300)
T ss_pred eCCCE
Confidence 98764
|
|
| >PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=3e-14 Score=128.02 Aligned_cols=190 Identities=15% Similarity=0.141 Sum_probs=125.3
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcch-hh---hhcCCCceeeeccCCCHHHHHHHhc-------Ccc
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-AM---ESFGTYVESMAGDASNKKFLKTALR-------GVR 165 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~-~~---~~~~~~v~~v~~D~~d~~~l~~~~~-------~~d 165 (306)
..+|+++||||+++||++++++|+++|++|+++.|+... .. +..+.++.++.+|++|.++++++++ .+|
T Consensus 6 l~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~iD 85 (251)
T PRK12481 6 LNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVMGHID 85 (251)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHcCCCC
Confidence 357999999999999999999999999999999886532 11 1124467889999999988887765 469
Q ss_pred EEEEcCCch--------------------------hh----hcccccC-CCEEEEecCcccccCCCCcccccchHHHH--
Q 021854 166 SIICPSEGF--------------------------IS----NAGSLKG-VQHVILLSQLSVYRGSGGIQALMKGNARK-- 212 (306)
Q Consensus 166 ~vi~~~~g~--------------------------~~----~~a~~~g-vkr~V~iSS~~~~~~~~~~~~~~~~~a~~-- 212 (306)
++||+++.. +. ..+.+.+ -.++|++||..++.+......|..+++..
T Consensus 86 ~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~asK~a~~~ 165 (251)
T PRK12481 86 ILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQGGIRVPSYTASKSAVMG 165 (251)
T ss_pred EEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcCCCCCCcchHHHHHHHHH
Confidence 999984310 01 1122222 36899999988876655556675544322
Q ss_pred HHHHHHHHHHhcCCCEEEEEcCcccCCCCCCc---ce---eeecCCCCccccCHHHHHHHHHHHhhCCC--CCCcEEEEe
Q 021854 213 LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQ---GF---QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVV 284 (306)
Q Consensus 213 ~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~~---~~---~~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~~~v~ 284 (306)
+.+.....+...|+++..|+||++........ .. ..........+..++|||.+++.++.+.. ..|+++.+.
T Consensus 166 l~~~la~e~~~~girvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~peeva~~~~~L~s~~~~~~~G~~i~vd 245 (251)
T PRK12481 166 LTRALATELSQYNINVNAIAPGYMATDNTAALRADTARNEAILERIPASRWGTPDDLAGPAIFLSSSASDYVTGYTLAVD 245 (251)
T ss_pred HHHHHHHHHhhcCeEEEEEecCCCccCchhhcccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCcCCceEEEC
Confidence 11222223445799999999998653321100 00 00000112345788999999999997533 457788877
Q ss_pred cC
Q 021854 285 NG 286 (306)
Q Consensus 285 ~g 286 (306)
+|
T Consensus 246 gg 247 (251)
T PRK12481 246 GG 247 (251)
T ss_pred CC
Confidence 65
|
|
| >PRK07774 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=2.5e-14 Score=127.68 Aligned_cols=187 Identities=17% Similarity=0.139 Sum_probs=121.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhh---h---cCCCceeeeccCCCHHHHHHHhc-------Cc
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---S---FGTYVESMAGDASNKKFLKTALR-------GV 164 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~---~---~~~~v~~v~~D~~d~~~l~~~~~-------~~ 164 (306)
++++++||||+|+||++++++|+++|++|+++.|+.++... . .+.++.++.+|++|.++++.+++ .+
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 84 (250)
T PRK07774 5 DDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAFGGI 84 (250)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence 46899999999999999999999999999999998754321 1 12356788999999988776664 57
Q ss_pred cEEEEcCCch-----------------------------hhh----cccccCCCEEEEecCcccccCCCCcccccchHHH
Q 021854 165 RSIICPSEGF-----------------------------ISN----AGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR 211 (306)
Q Consensus 165 d~vi~~~~g~-----------------------------~~~----~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~ 211 (306)
|+|||+++.. +.+ ...+.+.++||++||..++.+. ..|..+++.
T Consensus 85 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~---~~Y~~sK~a 161 (250)
T PRK07774 85 DYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAAWLYS---NFYGLAKVG 161 (250)
T ss_pred CEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEecccccCCc---cccHHHHHH
Confidence 9999984310 011 1223456799999998776532 344433221
Q ss_pred H--HHHHHHHHHHhcCCCEEEEEcCcccCCCCCCc-c-ee---eecCCCCccccCHHHHHHHHHHHhhCCC--CCCcEEE
Q 021854 212 K--LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQ-G-FQ---FEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFE 282 (306)
Q Consensus 212 ~--~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~~-~-~~---~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~~~ 282 (306)
. +.+.....+...++++++++||.+........ . .. ...........+++|+|++++.++.... ..+++|+
T Consensus 162 ~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~~~~~~~g~~~~ 241 (250)
T PRK07774 162 LNGLTQQLARELGGMNIRVNAIAPGPIDTEATRTVTPKEFVADMVKGIPLSRMGTPEDLVGMCLFLLSDEASWITGQIFN 241 (250)
T ss_pred HHHHHHHHHHHhCccCeEEEEEecCcccCccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhChhhhCcCCCEEE
Confidence 1 11111111223589999999998653322110 0 00 0011112235678999999999887643 4678999
Q ss_pred EecCC
Q 021854 283 VVNGE 287 (306)
Q Consensus 283 v~~g~ 287 (306)
+.+|.
T Consensus 242 v~~g~ 246 (250)
T PRK07774 242 VDGGQ 246 (250)
T ss_pred ECCCe
Confidence 98764
|
|
| >PRK08085 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=4.2e-14 Score=126.88 Aligned_cols=191 Identities=14% Similarity=0.076 Sum_probs=126.3
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh------cCCCceeeeccCCCHHHHHHHhc-------C
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------G 163 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~~~-------~ 163 (306)
..++++|||||+|+||++++++|+++|++|+++.|+.++..+. .+..+..+.+|++|.++++++++ .
T Consensus 7 l~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 86 (254)
T PRK08085 7 LAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIGP 86 (254)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhcCC
Confidence 3578999999999999999999999999999999987653321 12356788899999988877664 4
Q ss_pred ccEEEEcCCch--------------------------hh----hcccccCCCEEEEecCcccccCCCCcccccchHHHH-
Q 021854 164 VRSIICPSEGF--------------------------IS----NAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK- 212 (306)
Q Consensus 164 ~d~vi~~~~g~--------------------------~~----~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~- 212 (306)
+|++||+++.. +. ..+...+.++||++||.....+......|..+++..
T Consensus 87 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~ 166 (254)
T PRK08085 87 IDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQSELGRDTITPYAASKGAVK 166 (254)
T ss_pred CCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccchhccCCCCCcchHHHHHHHH
Confidence 69999984310 01 112234567999999987766555556665543321
Q ss_pred -HHHHHHHHHHhcCCCEEEEEcCcccCCCCCC----cce-e-eecCCCCccccCHHHHHHHHHHHhhCCC--CCCcEEEE
Q 021854 213 -LAEQDESMLMASGIPYTIIRTGVLQNTPGGK----QGF-Q-FEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEV 283 (306)
Q Consensus 213 -~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~----~~~-~-~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~~~v 283 (306)
+.+.....+...+++++.|+||++....... ... . .........+..++|||.++..++.... -.|++..+
T Consensus 167 ~~~~~la~e~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~~~~~l~~~~~~~i~G~~i~~ 246 (254)
T PRK08085 167 MLTRGMCVELARHNIQVNGIAPGYFKTEMTKALVEDEAFTAWLCKRTPAARWGDPQELIGAAVFLSSKASDFVNGHLLFV 246 (254)
T ss_pred HHHHHHHHHHHhhCeEEEEEEeCCCCCcchhhhccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCcCCEEEE
Confidence 1122222234579999999999865432110 000 0 0011112345678999999999887533 45777777
Q ss_pred ecCC
Q 021854 284 VNGE 287 (306)
Q Consensus 284 ~~g~ 287 (306)
.+|.
T Consensus 247 dgg~ 250 (254)
T PRK08085 247 DGGM 250 (254)
T ss_pred CCCe
Confidence 7654
|
|
| >PRK07890 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=1.8e-14 Score=129.15 Aligned_cols=190 Identities=12% Similarity=0.163 Sum_probs=123.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh------cCCCceeeeccCCCHHHHHHHhc-------Cc
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GV 164 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~~~-------~~ 164 (306)
.+++|+||||+|+||++++++|+++|++|+++.|+.++..+. .+.++.++.+|++|.++++.+++ .+
T Consensus 4 ~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~ 83 (258)
T PRK07890 4 KGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERFGRV 83 (258)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcCCc
Confidence 468999999999999999999999999999999988653322 13467889999999988876664 56
Q ss_pred cEEEEcCCch---------------------------hhhcccc---cCCCEEEEecCcccccCCCCcccccchHHHHH-
Q 021854 165 RSIICPSEGF---------------------------ISNAGSL---KGVQHVILLSQLSVYRGSGGIQALMKGNARKL- 213 (306)
Q Consensus 165 d~vi~~~~g~---------------------------~~~~a~~---~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~~- 213 (306)
|++||+++.. +.+++.. ...++||++||.....+..+...|..+++...
T Consensus 84 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~sK~a~~~ 163 (258)
T PRK07890 84 DALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESGGSIVMINSMVLRHSQPKYGAYKMAKGALLA 163 (258)
T ss_pred cEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCEEEEEechhhccCCCCcchhHHHHHHHHH
Confidence 9999984310 1111111 12358999999887766555556654332211
Q ss_pred -HHHHHHHHHhcCCCEEEEEcCcccCCCCC--------Cccee----e---ecCCCCccccCHHHHHHHHHHHhhCC--C
Q 021854 214 -AEQDESMLMASGIPYTIIRTGVLQNTPGG--------KQGFQ----F---EEGCAANGSLSKEDAAFICVEALESI--P 275 (306)
Q Consensus 214 -~~~aE~~l~~sgi~~tiiRPg~l~~~~~~--------~~~~~----~---~~g~~~~~~Is~~DVA~~iv~aL~~~--~ 275 (306)
.+.....+...++++++++||++...... ..... . ........+.+++|+|++++.++... .
T Consensus 164 l~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~~~l~~~~~~~ 243 (258)
T PRK07890 164 ASQSLATELGPQGIRVNSVAPGYIWGDPLKGYFRHQAGKYGVTVEQIYAETAANSDLKRLPTDDEVASAVLFLASDLARA 243 (258)
T ss_pred HHHHHHHHHhhcCcEEEEEeCCccCcHHHHHHhhhcccccCCCHHHHHHHHhhcCCccccCCHHHHHHHHHHHcCHhhhC
Confidence 11111223346899999999986432110 00000 0 01112234668899999999988743 3
Q ss_pred CCCcEEEEecCC
Q 021854 276 QTGLIFEVVNGE 287 (306)
Q Consensus 276 ~~g~~~~v~~g~ 287 (306)
..|+++.+.+|.
T Consensus 244 ~~G~~i~~~gg~ 255 (258)
T PRK07890 244 ITGQTLDVNCGE 255 (258)
T ss_pred ccCcEEEeCCcc
Confidence 457777777654
|
|
| >PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila | Back alignment and domain information |
|---|
Probab=99.61 E-value=4.9e-15 Score=133.33 Aligned_cols=136 Identities=19% Similarity=0.233 Sum_probs=82.8
Q ss_pred EEcCCChHHHHHHHHHHHCCC--eEEEEecCcch--hhh-----------------hcCCCceeeeccCCC------HHH
Q 021854 104 VTDGDSDIGQMVILSLIVKRT--RIKALVKDKRN--AME-----------------SFGTYVESMAGDASN------KKF 156 (306)
Q Consensus 104 VtGatG~iG~~l~~~L~~~g~--~V~~l~R~~~~--~~~-----------------~~~~~v~~v~~D~~d------~~~ 156 (306)
|||||||+|++++++|++.+. +|++++|..+. +.+ ....+++++.+|+++ .+.
T Consensus 1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~ 80 (249)
T PF07993_consen 1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED 80 (249)
T ss_dssp EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence 799999999999999999886 99999998743 110 015689999999996 356
Q ss_pred HHHHhcCccEEEEcCCch-------------------hhhcccccCCCEEEEecCcccccCCCCc---------------
Q 021854 157 LKTALRGVRSIICPSEGF-------------------ISNAGSLKGVQHVILLSQLSVYRGSGGI--------------- 202 (306)
Q Consensus 157 l~~~~~~~d~vi~~~~g~-------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~--------------- 202 (306)
+..+.+.+|+|||+++.. ++++|...+.++|+|+||..+.......
T Consensus 81 ~~~L~~~v~~IiH~Aa~v~~~~~~~~~~~~NV~gt~~ll~la~~~~~~~~~~iSTa~v~~~~~~~~~~~~~~~~~~~~~~ 160 (249)
T PF07993_consen 81 YQELAEEVDVIIHCAASVNFNAPYSELRAVNVDGTRNLLRLAAQGKRKRFHYISTAYVAGSRPGTIEEKVYPEEEDDLDP 160 (249)
T ss_dssp HHHHHHH--EEEE--SS-SBS-S--EEHHHHHHHHHHHHHHHTSSS---EEEEEEGGGTTS-TTT--SSS-HHH--EEE-
T ss_pred hhccccccceeeecchhhhhcccchhhhhhHHHHHHHHHHHHHhccCcceEEeccccccCCCCCcccccccccccccchh
Confidence 777788999999994421 5566776777799999994332211100
Q ss_pred ccccchHHHHHHHHHHHHHHh----cCCCEEEEEcCcccCC
Q 021854 203 QALMKGNARKLAEQDESMLMA----SGIPYTIIRTGVLQNT 239 (306)
Q Consensus 203 ~~~~~~~a~~~~~~aE~~l~~----sgi~~tiiRPg~l~~~ 239 (306)
.......+.+.|..+|.++++ .|++++|+|||.+...
T Consensus 161 ~~~~~~gY~~SK~~aE~~l~~a~~~~g~p~~I~Rp~~i~g~ 201 (249)
T PF07993_consen 161 PQGFPNGYEQSKWVAERLLREAAQRHGLPVTIYRPGIIVGD 201 (249)
T ss_dssp -TTSEE-HHHHHHHHHHHHHHHHHHH---EEEEEE-EEE-S
T ss_pred hccCCccHHHHHHHHHHHHHHHHhcCCceEEEEecCccccc
Confidence 011112456667888888874 3999999999997653
|
A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A. |
| >PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=5.6e-14 Score=125.44 Aligned_cols=189 Identities=17% Similarity=0.176 Sum_probs=123.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcch-hhh------hcCCCceeeeccCCCHHHHHHHhc-------C
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-AME------SFGTYVESMAGDASNKKFLKTALR-------G 163 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~-~~~------~~~~~v~~v~~D~~d~~~l~~~~~-------~ 163 (306)
.+++|+||||+|+||++++++|+++|++|++..|+... ..+ ..+.++..+.+|++|.+++..+++ .
T Consensus 5 ~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 84 (252)
T PRK06077 5 KDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDRYGV 84 (252)
T ss_pred CCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHHcCC
Confidence 36899999999999999999999999999888765422 111 122356788899999888776654 5
Q ss_pred ccEEEEcCCch--------------------------hhhcccc--cCCCEEEEecCcccccCCCCcccccchHHHHHHH
Q 021854 164 VRSIICPSEGF--------------------------ISNAGSL--KGVQHVILLSQLSVYRGSGGIQALMKGNARKLAE 215 (306)
Q Consensus 164 ~d~vi~~~~g~--------------------------~~~~a~~--~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~~~~ 215 (306)
+|+|||+++.. +.+++.. ...++||++||..++.+..+...|..+++....
T Consensus 85 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~~~~~- 163 (252)
T PRK06077 85 ADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAGIRPAYGLSIYGAMKAAVIN- 163 (252)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhccCCCCCchHHHHHHHHHHH-
Confidence 79999984310 0111111 123589999999888776666666554332111
Q ss_pred HHHHHHHh--cCCCEEEEEcCcccCCCCCC--c--ce---ee-ecCCCCccccCHHHHHHHHHHHhhCCCCCCcEEEEec
Q 021854 216 QDESMLMA--SGIPYTIIRTGVLQNTPGGK--Q--GF---QF-EEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVVN 285 (306)
Q Consensus 216 ~aE~~l~~--sgi~~tiiRPg~l~~~~~~~--~--~~---~~-~~g~~~~~~Is~~DVA~~iv~aL~~~~~~g~~~~v~~ 285 (306)
.++.+.++ .++.+.+++||++....... . .. .+ ........+++++|+|++++.++..+...+++|++.+
T Consensus 164 ~~~~l~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~~~~g~~~~i~~ 243 (252)
T PRK06077 164 LTKYLALELAPKIRVNAIAPGFVKTKLGESLFKVLGMSEKEFAEKFTLMGKILDPEEVAEFVAAILKIESITGQVFVLDS 243 (252)
T ss_pred HHHHHHHHHhcCCEEEEEeeCCccChHHHhhhhcccccHHHHHHhcCcCCCCCCHHHHHHHHHHHhCccccCCCeEEecC
Confidence 12222222 37999999999864332100 0 00 00 0011123569999999999999987666788999998
Q ss_pred CC
Q 021854 286 GE 287 (306)
Q Consensus 286 g~ 287 (306)
|.
T Consensus 244 g~ 245 (252)
T PRK06077 244 GE 245 (252)
T ss_pred Ce
Confidence 75
|
|
| >PRK06114 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=5.2e-14 Score=126.45 Aligned_cols=191 Identities=17% Similarity=0.133 Sum_probs=122.7
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchh-hh------hcCCCceeeeccCCCHHHHHHHhcC------
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-ME------SFGTYVESMAGDASNKKFLKTALRG------ 163 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~-~~------~~~~~v~~v~~D~~d~~~l~~~~~~------ 163 (306)
..+++++||||+|+||++++++|+++|++|+++.|+.+.. .+ ..+.++..+.+|++|.++++++++.
T Consensus 6 ~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g 85 (254)
T PRK06114 6 LDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAELG 85 (254)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 3478999999999999999999999999999999876431 11 1134677899999999888776653
Q ss_pred -ccEEEEcCCch------------------------------hhhcccccCCCEEEEecCcccccCCCC--cccccchHH
Q 021854 164 -VRSIICPSEGF------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGG--IQALMKGNA 210 (306)
Q Consensus 164 -~d~vi~~~~g~------------------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~--~~~~~~~~a 210 (306)
+|++||+++.. ....+.+.+.+++|++||..+..+... ...|..+++
T Consensus 86 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~Y~~sKa 165 (254)
T PRK06114 86 ALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGGSIVNIASMSGIIVNRGLLQAHYNASKA 165 (254)
T ss_pred CCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCCCCcchHHHHHH
Confidence 59999984310 011123345679999999876543322 344544332
Q ss_pred HH--HHHHHHHHHHhcCCCEEEEEcCcccCCCCCCcce-----eeecCCCCccccCHHHHHHHHHHHhhCCC--CCCcEE
Q 021854 211 RK--LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGF-----QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIF 281 (306)
Q Consensus 211 ~~--~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~~~~-----~~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~~ 281 (306)
.. +.+.....+...++++++|+||++.......... .+........+..++|||.+++.++.+.. -.|+++
T Consensus 166 a~~~l~~~la~e~~~~gi~v~~v~PG~i~t~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~~~~l~s~~~~~~tG~~i 245 (254)
T PRK06114 166 GVIHLSKSLAMEWVGRGIRVNSISPGYTATPMNTRPEMVHQTKLFEEQTPMQRMAKVDEMVGPAVFLLSDAASFCTGVDL 245 (254)
T ss_pred HHHHHHHHHHHHHhhcCeEEEEEeecCccCcccccccchHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCcCCceE
Confidence 11 1122222234578999999999864322111000 00011112335678999999999886533 357888
Q ss_pred EEecCC
Q 021854 282 EVVNGE 287 (306)
Q Consensus 282 ~v~~g~ 287 (306)
.+.+|-
T Consensus 246 ~~dgg~ 251 (254)
T PRK06114 246 LVDGGF 251 (254)
T ss_pred EECcCE
Confidence 887663
|
|
| >PRK06181 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=4.6e-14 Score=127.15 Aligned_cols=176 Identities=13% Similarity=0.167 Sum_probs=117.7
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh------cCCCceeeeccCCCHHHHHHHhc-------Ccc
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GVR 165 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~~~-------~~d 165 (306)
+++|+||||+|+||++++++|++.|++|++++|+..+..+. .+.++.++.+|++|.+.+..+++ ++|
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 80 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGID 80 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 36899999999999999999999999999999987653221 23467889999999998887765 579
Q ss_pred EEEEcCCch----h-----------------------hhccc---ccCCCEEEEecCcccccCCCCcccccchHHHH--H
Q 021854 166 SIICPSEGF----I-----------------------SNAGS---LKGVQHVILLSQLSVYRGSGGIQALMKGNARK--L 213 (306)
Q Consensus 166 ~vi~~~~g~----~-----------------------~~~a~---~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~--~ 213 (306)
+|||+++.. + .+.+. ..+.+++|++||..++.+..+...|..+++.. .
T Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~~~~~~ 160 (263)
T PRK06181 81 ILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASRGQIVVVSSLAGLTGVPTRSGYAASKHALHGF 160 (263)
T ss_pred EEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCEEEEEecccccCCCCCccHHHHHHHHHHHH
Confidence 999984311 0 11111 13457899999988877665555665433211 1
Q ss_pred HHHHHHHHHhcCCCEEEEEcCcccCCCCC----Ccceee-ecCCCCccccCHHHHHHHHHHHhhCC
Q 021854 214 AEQDESMLMASGIPYTIIRTGVLQNTPGG----KQGFQF-EEGCAANGSLSKEDAAFICVEALESI 274 (306)
Q Consensus 214 ~~~aE~~l~~sgi~~tiiRPg~l~~~~~~----~~~~~~-~~g~~~~~~Is~~DVA~~iv~aL~~~ 274 (306)
.+.....+...++++++++||++...... ..+... ..+.....+++++|+|++++.+++..
T Consensus 161 ~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~~~~~~ 226 (263)
T PRK06181 161 FDSLRIELADDGVAVTVVCPGFVATDIRKRALDGDGKPLGKSPMQESKIMSAEECAEAILPAIARR 226 (263)
T ss_pred HHHHHHHhhhcCceEEEEecCccccCcchhhccccccccccccccccCCCCHHHHHHHHHHHhhCC
Confidence 11111223447899999999986533211 111111 11112236799999999999999753
|
|
| >PRK08251 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=3.9e-14 Score=126.42 Aligned_cols=169 Identities=20% Similarity=0.225 Sum_probs=114.9
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh-------c-CCCceeeeccCCCHHHHHHHhc-------C
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------F-GTYVESMAGDASNKKFLKTALR-------G 163 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~-------~-~~~v~~v~~D~~d~~~l~~~~~-------~ 163 (306)
+++++||||+|+||++++++|+++|++|+++.|+.++..+. . +..+.++.+|++|.+++.++++ +
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 81 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGG 81 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 68999999999999999999999999999999988653321 1 2367889999999988776554 5
Q ss_pred ccEEEEcCC----ch--------------------------hhhcccccCCCEEEEecCcccccCCCC-cccccchHHHH
Q 021854 164 VRSIICPSE----GF--------------------------ISNAGSLKGVQHVILLSQLSVYRGSGG-IQALMKGNARK 212 (306)
Q Consensus 164 ~d~vi~~~~----g~--------------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~-~~~~~~~~a~~ 212 (306)
+|++||+++ .. ..+.+++.+.++||++||..+..+... ...|..+++..
T Consensus 82 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~Y~~sK~a~ 161 (248)
T PRK08251 82 LDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQGSGHLVLISSVSAVRGLPGVKAAYAASKAGV 161 (248)
T ss_pred CCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeccccccCCCCCcccHHHHHHHH
Confidence 799999743 10 011223457789999999876654332 34565443321
Q ss_pred H--HHHHHHHHHhcCCCEEEEEcCcccCCCCCCcceeeecCCCCccccCHHHHHHHHHHHhhCC
Q 021854 213 L--AEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESI 274 (306)
Q Consensus 213 ~--~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~~~~~~~~g~~~~~~Is~~DVA~~iv~aL~~~ 274 (306)
. .+.....+...+++++.++||++......... . ....++.+|+|+.++.+++..
T Consensus 162 ~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~------~-~~~~~~~~~~a~~i~~~~~~~ 218 (248)
T PRK08251 162 ASLGEGLRAELAKTPIKVSTIEPGYIRSEMNAKAK------S-TPFMVDTETGVKALVKAIEKE 218 (248)
T ss_pred HHHHHHHHHHhcccCcEEEEEecCcCcchhhhccc------c-CCccCCHHHHHHHHHHHHhcC
Confidence 1 11111122346899999999997543221111 0 123588999999999999754
|
|
| >KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.61 E-value=4.2e-14 Score=128.67 Aligned_cols=200 Identities=17% Similarity=0.183 Sum_probs=141.2
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcch-------hhhhcC--CCceeeeccCCCHHHHHHHhcC--ccEE
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-------AMESFG--TYVESMAGDASNKKFLKTALRG--VRSI 167 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~-------~~~~~~--~~v~~v~~D~~d~~~l~~~~~~--~d~v 167 (306)
.++||||||+|+||++.+.+|+++|+.|+++..=... .....+ ..+.++.+|+.|.+.++++|+. .|.|
T Consensus 2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~~fd~V 81 (343)
T KOG1371|consen 2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEVKFDAV 81 (343)
T ss_pred CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhcCCceE
Confidence 5899999999999999999999999999987532211 223333 6899999999999999999985 4999
Q ss_pred EEcCC----c----------------h--hhhcccccCCCEEEEecCcccccCCC------------CcccccchHHHHH
Q 021854 168 ICPSE----G----------------F--ISNAGSLKGVQHVILLSQLSVYRGSG------------GIQALMKGNARKL 213 (306)
Q Consensus 168 i~~~~----g----------------~--~~~~a~~~gvkr~V~iSS~~~~~~~~------------~~~~~~~~~a~~~ 213 (306)
+|.++ + + +.+.+++++++++||.||+.+|..+. +...| ...
T Consensus 82 ~Hfa~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~~~~~~V~sssatvYG~p~~ip~te~~~t~~p~~py-----g~t 156 (343)
T KOG1371|consen 82 MHFAALAAVGESMENPLSYYHNNIAGTLNLLEVMKAHNVKALVFSSSATVYGLPTKVPITEEDPTDQPTNPY-----GKT 156 (343)
T ss_pred EeehhhhccchhhhCchhheehhhhhHHHHHHHHHHcCCceEEEecceeeecCcceeeccCcCCCCCCCCcc-----hhh
Confidence 98732 1 1 56778889999999999999987321 22223 223
Q ss_pred HHHHHHHHHh----cCCCEEEEEcCcc---------cCCCC-----------------------CCcceeeecCCCCccc
Q 021854 214 AEQDESMLMA----SGIPYTIIRTGVL---------QNTPG-----------------------GKQGFQFEEGCAANGS 257 (306)
Q Consensus 214 ~~~aE~~l~~----sgi~~tiiRPg~l---------~~~~~-----------------------~~~~~~~~~g~~~~~~ 257 (306)
|...|+.+.. .+..++.||-... .+.+. .++......|+...+.
T Consensus 157 K~~iE~i~~d~~~~~~~~~~~LRyfn~~ga~p~Gr~ge~p~~~~nnl~p~v~~vaigr~~~l~v~g~d~~t~dgt~vrdy 236 (343)
T KOG1371|consen 157 KKAIEEIIHDYNKAYGWKVTGLRYFNVIGAHPSGRIGEAPLGIPNNLLPYVFQVAIGRRPNLQVVGRDYTTIDGTIVRDY 236 (343)
T ss_pred hHHHHHHHHhhhccccceEEEEEeccccCccccCccCCCCccCcccccccccchhhcccccceeecCcccccCCCeeecc
Confidence 4455665543 4577788883321 11110 0111111244556788
Q ss_pred cCHHHHHHHHHHHhhCCCC--CCcEEEEecCCc-CHHHHHHHHHHHhhh
Q 021854 258 LSKEDAAFICVEALESIPQ--TGLIFEVVNGEE-KVSDWKKCFSRLMEK 303 (306)
Q Consensus 258 Is~~DVA~~iv~aL~~~~~--~g~~~~v~~g~~-s~~d~~~l~~~l~~~ 303 (306)
|+.-|.|+..+.++..... .-.+||+..+.. ++.++...|+...++
T Consensus 237 i~v~Dla~~h~~al~k~~~~~~~~i~Nlgtg~g~~V~~lv~a~~k~~g~ 285 (343)
T KOG1371|consen 237 IHVLDLADGHVAALGKLRGAAEFGVYNLGTGKGSSVLELVTAFEKALGV 285 (343)
T ss_pred eeeEehHHHHHHHhhccccchheeeEeecCCCCccHHHHHHHHHHHhcC
Confidence 9999999999999987653 335999998764 688888888887664
|
|
| >PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=5e-14 Score=125.84 Aligned_cols=190 Identities=14% Similarity=0.149 Sum_probs=123.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCc-chhh---hhcCCCceeeeccCCCHHHHHHHhcC--------cc
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK-RNAM---ESFGTYVESMAGDASNKKFLKTALRG--------VR 165 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~-~~~~---~~~~~~v~~v~~D~~d~~~l~~~~~~--------~d 165 (306)
++++|+||||+|+||+++++.|+++|++|+++.|+. ++.. ...+.++.++.+|+.|.++++++++. +|
T Consensus 4 ~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~id 83 (253)
T PRK08642 4 SEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADELGDRAIALQADVTDREQVQAMFATATEHFGKPIT 83 (253)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCe
Confidence 468999999999999999999999999998876543 3322 22334688899999999888877753 89
Q ss_pred EEEEcCCc-----------h---------------------hhhc----ccccCCCEEEEecCcccccCCCCcccccchH
Q 021854 166 SIICPSEG-----------F---------------------ISNA----GSLKGVQHVILLSQLSVYRGSGGIQALMKGN 209 (306)
Q Consensus 166 ~vi~~~~g-----------~---------------------~~~~----a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~ 209 (306)
++||+++. . +.++ ....+..++|++||.....+..+...|..++
T Consensus 84 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK 163 (253)
T PRK08642 84 TVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGFGRIINIGTNLFQNPVVPYHDYTTAK 163 (253)
T ss_pred EEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCCeEEEEECCccccCCCCCccchHHHH
Confidence 99997421 0 1111 1234567999999976655544455565443
Q ss_pred HHH--HHHHHHHHHHhcCCCEEEEEcCcccCCCCCC--ccee---eecCCCCccccCHHHHHHHHHHHhhCC--CCCCcE
Q 021854 210 ARK--LAEQDESMLMASGIPYTIIRTGVLQNTPGGK--QGFQ---FEEGCAANGSLSKEDAAFICVEALESI--PQTGLI 280 (306)
Q Consensus 210 a~~--~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~--~~~~---~~~g~~~~~~Is~~DVA~~iv~aL~~~--~~~g~~ 280 (306)
+.. +.+.....+...+++++.|+||++....... .... +........+.+++|+|++++.++.++ ...|+.
T Consensus 164 ~a~~~l~~~la~~~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~ 243 (253)
T PRK08642 164 AALLGLTRNLAAELGPYGITVNMVSGGLLRTTDASAATPDEVFDLIAATTPLRKVTTPQEFADAVLFFASPWARAVTGQN 243 (253)
T ss_pred HHHHHHHHHHHHHhCccCeEEEEEeecccCCchhhccCCHHHHHHHHhcCCcCCCCCHHHHHHHHHHHcCchhcCccCCE
Confidence 321 1111111222368999999999875332111 0000 001112245789999999999999754 356788
Q ss_pred EEEecCC
Q 021854 281 FEVVNGE 287 (306)
Q Consensus 281 ~~v~~g~ 287 (306)
+.+.+|.
T Consensus 244 ~~vdgg~ 250 (253)
T PRK08642 244 LVVDGGL 250 (253)
T ss_pred EEeCCCe
Confidence 8888763
|
|
| >PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=6.7e-14 Score=125.73 Aligned_cols=191 Identities=15% Similarity=0.109 Sum_probs=124.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhh-hhcCCCceeeeccCCCHHHHHHHhc-------CccEEEE
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM-ESFGTYVESMAGDASNKKFLKTALR-------GVRSIIC 169 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~-~~~~~~v~~v~~D~~d~~~l~~~~~-------~~d~vi~ 169 (306)
.+|+++||||+|+||++++++|+++|++|+++.|+.+... .....++.++.+|++|.++++++++ .+|++||
T Consensus 6 ~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~ 85 (255)
T PRK06463 6 KGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELREKGVFTIKCDVGNRDQVKKSKEVVEKEFGRVDVLVN 85 (255)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhCCCeEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 4699999999999999999999999999998877654322 2222257889999999998887765 5699999
Q ss_pred cCCch------------------------------hhhcccccCCCEEEEecCcccccC-CCCcccccchHHHH--HHHH
Q 021854 170 PSEGF------------------------------ISNAGSLKGVQHVILLSQLSVYRG-SGGIQALMKGNARK--LAEQ 216 (306)
Q Consensus 170 ~~~g~------------------------------~~~~a~~~gvkr~V~iSS~~~~~~-~~~~~~~~~~~a~~--~~~~ 216 (306)
+++.. +...+++.+.+++|++||..++.. ..+...|..+++.. +.+.
T Consensus 86 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~asKaa~~~~~~~ 165 (255)
T PRK06463 86 NAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSKNGAIVNIASNAGIGTAAEGTTFYAITKAGIIILTRR 165 (255)
T ss_pred CCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHhCCCCCCCccHhHHHHHHHHHHHHH
Confidence 84310 111233345679999999877643 23334454433321 1122
Q ss_pred HHHHHHhcCCCEEEEEcCcccCCCCCC--cce-------eeecCCCCccccCHHHHHHHHHHHhhCCC--CCCcEEEEec
Q 021854 217 DESMLMASGIPYTIIRTGVLQNTPGGK--QGF-------QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVN 285 (306)
Q Consensus 217 aE~~l~~sgi~~tiiRPg~l~~~~~~~--~~~-------~~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~~~v~~ 285 (306)
....+...+++++.|+||++....... ... .+........+.+++|+|++++.++..+. ..|+.+.+.+
T Consensus 166 la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~~~~dg 245 (255)
T PRK06463 166 LAFELGKYGIRVNAVAPGWVETDMTLSGKSQEEAEKLRELFRNKTVLKTTGKPEDIANIVLFLASDDARYITGQVIVADG 245 (255)
T ss_pred HHHHhhhcCeEEEEEeeCCCCCchhhcccCccchHHHHHHHHhCCCcCCCcCHHHHHHHHHHHcChhhcCCCCCEEEECC
Confidence 222234468999999999865332110 000 00011112335688999999999987543 4578888887
Q ss_pred CCc
Q 021854 286 GEE 288 (306)
Q Consensus 286 g~~ 288 (306)
|..
T Consensus 246 g~~ 248 (255)
T PRK06463 246 GRI 248 (255)
T ss_pred Cee
Confidence 764
|
|
| >PRK06398 aldose dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.60 E-value=4.6e-14 Score=127.33 Aligned_cols=185 Identities=14% Similarity=0.124 Sum_probs=123.7
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhc-------CccEEEE
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR-------GVRSIIC 169 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~-------~~d~vi~ 169 (306)
.++++++||||+|+||++++++|+++|++|+++.|+.+.. .++.++.+|++|.++++++++ .+|++||
T Consensus 4 l~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~-----~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~li~ 78 (258)
T PRK06398 4 LKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSY-----NDVDYFKVDVSNKEQVIKGIDYVISKYGRIDILVN 78 (258)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCcccc-----CceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 3579999999999999999999999999999999987542 257889999999988877664 5799999
Q ss_pred cCCch--------------------------h----hhcccccCCCEEEEecCcccccCCCCcccccchHHHHHHHHHHH
Q 021854 170 PSEGF--------------------------I----SNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDES 219 (306)
Q Consensus 170 ~~~g~--------------------------~----~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~~~~~aE~ 219 (306)
+++.. + ...+.+.+.+++|++||..++.+..+...|..+++.... .++.
T Consensus 79 ~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaal~~-~~~~ 157 (258)
T PRK06398 79 NAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIASVQSFAVTRNAAAYVTSKHAVLG-LTRS 157 (258)
T ss_pred CCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCcchhccCCCCCchhhhhHHHHHH-HHHH
Confidence 74310 1 111233456899999999887766666677654432211 1111
Q ss_pred HHHh--cCCCEEEEEcCcccCCCCC--------Cccee-------eecCCCCccccCHHHHHHHHHHHhhCCC--CCCcE
Q 021854 220 MLMA--SGIPYTIIRTGVLQNTPGG--------KQGFQ-------FEEGCAANGSLSKEDAAFICVEALESIP--QTGLI 280 (306)
Q Consensus 220 ~l~~--sgi~~tiiRPg~l~~~~~~--------~~~~~-------~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~ 280 (306)
+-.+ ..++++.|+||++...... ..... +........+..++|+|+++++++.... ..|++
T Consensus 158 la~e~~~~i~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~eva~~~~~l~s~~~~~~~G~~ 237 (258)
T PRK06398 158 IAVDYAPTIRCVAVCPGSIRTPLLEWAAELEVGKDPEHVERKIREWGEMHPMKRVGKPEEVAYVVAFLASDLASFITGEC 237 (258)
T ss_pred HHHHhCCCCEEEEEecCCccchHHhhhhhccccCChhhhHHHHHhhhhcCCcCCCcCHHHHHHHHHHHcCcccCCCCCcE
Confidence 1111 2499999999986422110 00000 0011111234578999999999887543 46788
Q ss_pred EEEecCC
Q 021854 281 FEVVNGE 287 (306)
Q Consensus 281 ~~v~~g~ 287 (306)
+.+.+|.
T Consensus 238 i~~dgg~ 244 (258)
T PRK06398 238 VTVDGGL 244 (258)
T ss_pred EEECCcc
Confidence 8888764
|
|
| >PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=4e-14 Score=125.45 Aligned_cols=188 Identities=15% Similarity=0.177 Sum_probs=120.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh---cC--CCceeeeccCCCHHHHHHHhc-------Ccc
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FG--TYVESMAGDASNKKFLKTALR-------GVR 165 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~---~~--~~v~~v~~D~~d~~~l~~~~~-------~~d 165 (306)
++++|+||||+|+||+++++.|+++|++|++++|+.++.... .. .++.++.+|++|.++++++++ ++|
T Consensus 4 ~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 83 (238)
T PRK05786 4 KGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVLNAID 83 (238)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence 468999999999999999999999999999999988764322 11 257889999999988876554 458
Q ss_pred EEEEcCCchh------------------------hhcccc--cCCCEEEEecCcccc-cCCCCcccccchHHHHH--HHH
Q 021854 166 SIICPSEGFI------------------------SNAGSL--KGVQHVILLSQLSVY-RGSGGIQALMKGNARKL--AEQ 216 (306)
Q Consensus 166 ~vi~~~~g~~------------------------~~~a~~--~gvkr~V~iSS~~~~-~~~~~~~~~~~~~a~~~--~~~ 216 (306)
.+|++++... ...... ..-.+||++||..+. .+......|..+++... .+.
T Consensus 84 ~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~~Y~~sK~~~~~~~~~ 163 (238)
T PRK05786 84 GLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMSGIYKASPDQLSYAVAKAGLAKAVEI 163 (238)
T ss_pred EEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecchhcccCCCCchHHHHHHHHHHHHHHH
Confidence 9998743210 000000 122579999987653 23333344544433211 122
Q ss_pred HHHHHHhcCCCEEEEEcCcccCCCCCCcceeeecCCCCccccCHHHHHHHHHHHhhCCC--CCCcEEEEecC
Q 021854 217 DESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVNG 286 (306)
Q Consensus 217 aE~~l~~sgi~~tiiRPg~l~~~~~~~~~~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~~~v~~g 286 (306)
....+...++++++||||++............ ........++++|+|+++++++..+. ..|+.+.+.++
T Consensus 164 ~~~~~~~~gi~v~~i~pg~v~~~~~~~~~~~~-~~~~~~~~~~~~~va~~~~~~~~~~~~~~~g~~~~~~~~ 234 (238)
T PRK05786 164 LASELLGRGIRVNGIAPTTISGDFEPERNWKK-LRKLGDDMAPPEDFAKVIIWLLTDEADWVDGVVIPVDGG 234 (238)
T ss_pred HHHHHhhcCeEEEEEecCccCCCCCchhhhhh-hccccCCCCCHHHHHHHHHHHhcccccCccCCEEEECCc
Confidence 22333456999999999997643221111000 01111246899999999999997644 35777777654
|
|
| >PRK08643 acetoin reductase; Validated | Back alignment and domain information |
|---|
Probab=99.60 E-value=3.7e-14 Score=127.29 Aligned_cols=189 Identities=15% Similarity=0.102 Sum_probs=122.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh------cCCCceeeeccCCCHHHHHHHhc-------Cc
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GV 164 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~~~-------~~ 164 (306)
|+++++||||+|+||++++++|+++|++|+++.|+.++.... .+.++.++.+|++|++++.++++ ++
T Consensus 1 ~~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 80 (256)
T PRK08643 1 MSKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDL 80 (256)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 468999999999999999999999999999999987653221 12467789999999988777665 57
Q ss_pred cEEEEcCCch--------------------------hh----hcccccC-CCEEEEecCcccccCCCCcccccchHHHH-
Q 021854 165 RSIICPSEGF--------------------------IS----NAGSLKG-VQHVILLSQLSVYRGSGGIQALMKGNARK- 212 (306)
Q Consensus 165 d~vi~~~~g~--------------------------~~----~~a~~~g-vkr~V~iSS~~~~~~~~~~~~~~~~~a~~- 212 (306)
|++||+++.. +. +...+.+ ..++|++||..+..+......|..+++..
T Consensus 81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~ 160 (256)
T PRK08643 81 NVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVVGNPELAVYSSTKFAVR 160 (256)
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECccccccCCCCCchhHHHHHHHH
Confidence 9999984311 00 1112222 35899999987766655555665443321
Q ss_pred -HHHHHHHHHHhcCCCEEEEEcCcccCCCCC----------Cccee-----eecCCCCccccCHHHHHHHHHHHhhCCC-
Q 021854 213 -LAEQDESMLMASGIPYTIIRTGVLQNTPGG----------KQGFQ-----FEEGCAANGSLSKEDAAFICVEALESIP- 275 (306)
Q Consensus 213 -~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~----------~~~~~-----~~~g~~~~~~Is~~DVA~~iv~aL~~~~- 275 (306)
+.+.....+...|++++.|+||++...... ..... +........+.+++|+|.++..++....
T Consensus 161 ~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~L~~~~~~ 240 (256)
T PRK08643 161 GLTQTAARDLASEGITVNAYAPGIVKTPMMFDIAHQVGENAGKPDEWGMEQFAKDITLGRLSEPEDVANCVSFLAGPDSD 240 (256)
T ss_pred HHHHHHHHHhcccCcEEEEEeeCCCcChhhhHHHhhhccccCCCchHHHHHHhccCCCCCCcCHHHHHHHHHHHhCcccc
Confidence 112222223457899999999986422100 00000 0001112345688999999999886543
Q ss_pred -CCCcEEEEecC
Q 021854 276 -QTGLIFEVVNG 286 (306)
Q Consensus 276 -~~g~~~~v~~g 286 (306)
..|+.+.+.+|
T Consensus 241 ~~~G~~i~vdgg 252 (256)
T PRK08643 241 YITGQTIIVDGG 252 (256)
T ss_pred CccCcEEEeCCC
Confidence 45778877755
|
|
| >PRK07097 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=6e-14 Score=126.81 Aligned_cols=190 Identities=14% Similarity=0.074 Sum_probs=127.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh------cCCCceeeeccCCCHHHHHHHhc-------Cc
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GV 164 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~~~-------~~ 164 (306)
.+++++||||+++||++++++|++.|++|+++.|+.++..+. .+.++.++.+|++|.++++.+++ .+
T Consensus 9 ~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 88 (265)
T PRK07097 9 KGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEVGVI 88 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence 468999999999999999999999999999999988653221 13468889999999998887775 36
Q ss_pred cEEEEcCCch------------------------------hhhcccccCCCEEEEecCcccccCCCCcccccchHHHH--
Q 021854 165 RSIICPSEGF------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK-- 212 (306)
Q Consensus 165 d~vi~~~~g~------------------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~-- 212 (306)
|++||+++.. +...+.+.+.++||++||.....+..+...|..+++.-
T Consensus 89 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaal~~ 168 (265)
T PRK07097 89 DILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSELGRETVSAYAAAKGGLKM 168 (265)
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCcEEEEEcCccccCCCCCCccHHHHHHHHHH
Confidence 9999984310 11123345678999999987665555556665544321
Q ss_pred HHHHHHHHHHhcCCCEEEEEcCcccCCCCCC--------cceee----ecCCCCccccCHHHHHHHHHHHhhCC--CCCC
Q 021854 213 LAEQDESMLMASGIPYTIIRTGVLQNTPGGK--------QGFQF----EEGCAANGSLSKEDAAFICVEALESI--PQTG 278 (306)
Q Consensus 213 ~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~--------~~~~~----~~g~~~~~~Is~~DVA~~iv~aL~~~--~~~g 278 (306)
+.+.....+...+|.++.|+||++....... ....+ ........+..++|+|..++.++.+. ...|
T Consensus 169 l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g 248 (265)
T PRK07097 169 LTKNIASEYGEANIQCNGIGPGYIATPQTAPLRELQADGSRHPFDQFIIAKTPAARWGDPEDLAGPAVFLASDASNFVNG 248 (265)
T ss_pred HHHHHHHHhhhcCceEEEEEeccccccchhhhhhccccccchhHHHHHHhcCCccCCcCHHHHHHHHHHHhCcccCCCCC
Confidence 1222222344578999999999865322100 00000 00111234567899999999999764 3467
Q ss_pred cEEEEecCC
Q 021854 279 LIFEVVNGE 287 (306)
Q Consensus 279 ~~~~v~~g~ 287 (306)
+.+.+.+|.
T Consensus 249 ~~~~~~gg~ 257 (265)
T PRK07097 249 HILYVDGGI 257 (265)
T ss_pred CEEEECCCc
Confidence 788887765
|
|
| >TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.59 E-value=6.1e-14 Score=124.34 Aligned_cols=188 Identities=16% Similarity=0.123 Sum_probs=123.8
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEec-Ccchhhh------hcCCCceeeeccCCCHHHHHHHhc-------Ccc
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVK-DKRNAME------SFGTYVESMAGDASNKKFLKTALR-------GVR 165 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R-~~~~~~~------~~~~~v~~v~~D~~d~~~l~~~~~-------~~d 165 (306)
|+++||||+|+||++++++|+++|++|+++.| +.+...+ ..+.++.++.+|++|.+++.++++ .+|
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 80 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELGPID 80 (242)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCc
Confidence 58999999999999999999999999999988 4433221 113468899999999888776654 479
Q ss_pred EEEEcCCch------------------------------hhhcccccCCCEEEEecCcccccCCCCcccccchHHHH--H
Q 021854 166 SIICPSEGF------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK--L 213 (306)
Q Consensus 166 ~vi~~~~g~------------------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~--~ 213 (306)
+|||+++.. +...+++.+.+++|++||..+..+..+...|..+++.. +
T Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sk~a~~~~ 160 (242)
T TIGR01829 81 VLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERGWGRIINISSVNGQKGQFGQTNYSAAKAGMIGF 160 (242)
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCCCCcchhHHHHHHHHHH
Confidence 999984311 11223456778999999987665555555554443311 1
Q ss_pred HHHHHHHHHhcCCCEEEEEcCcccCCCCCC-ccee---eecCCCCccccCHHHHHHHHHHHhhCCC--CCCcEEEEecCC
Q 021854 214 AEQDESMLMASGIPYTIIRTGVLQNTPGGK-QGFQ---FEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVNGE 287 (306)
Q Consensus 214 ~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~-~~~~---~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~~~v~~g~ 287 (306)
.+.....+...+++++.++||++....... .... +........+..++|+|+++..++.++. ..|+.+.+.++.
T Consensus 161 ~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~G~~~~~~gg~ 240 (242)
T TIGR01829 161 TKALAQEGATKGVTVNTISPGYIATDMVMAMREDVLNSIVAQIPVGRLGRPEEIAAAVAFLASEEAGYITGATLSINGGL 240 (242)
T ss_pred HHHHHHHhhhhCeEEEEEeeCCCcCccccccchHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCccCCEEEecCCc
Confidence 222222244579999999999976432211 0000 0011122345678999999988876543 458889888764
|
(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. |
| >PRK07062 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.59 E-value=5.6e-14 Score=126.85 Aligned_cols=190 Identities=15% Similarity=0.149 Sum_probs=125.4
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh-------cC-CCceeeeccCCCHHHHHHHhc------
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------FG-TYVESMAGDASNKKFLKTALR------ 162 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~-------~~-~~v~~v~~D~~d~~~l~~~~~------ 162 (306)
.++++++||||+++||++++++|+++|++|+++.|+.++..+. .+ .++.++.+|++|.++++++++
T Consensus 6 l~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 85 (265)
T PRK07062 6 LEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEARF 85 (265)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHhc
Confidence 3578999999999999999999999999999999988653221 12 357788999999988776553
Q ss_pred -CccEEEEcCCch------------------------------hhhcccccCCCEEEEecCcccccCCCCcccccchHHH
Q 021854 163 -GVRSIICPSEGF------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR 211 (306)
Q Consensus 163 -~~d~vi~~~~g~------------------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~ 211 (306)
.+|++||+++.. +...+++.+..++|++||..+..+......|..+++.
T Consensus 86 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~asKaa 165 (265)
T PRK07062 86 GGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASAAASIVCVNSLLALQPEPHMVATSAARAG 165 (265)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCcEEEEeccccccCCCCCchHhHHHHHH
Confidence 569999984310 1112334456799999998887665555556543332
Q ss_pred H--HHHHHHHHHHhcCCCEEEEEcCcccCCCCCC-------cceeee---------cCCCCccccCHHHHHHHHHHHhhC
Q 021854 212 K--LAEQDESMLMASGIPYTIIRTGVLQNTPGGK-------QGFQFE---------EGCAANGSLSKEDAAFICVEALES 273 (306)
Q Consensus 212 ~--~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~-------~~~~~~---------~g~~~~~~Is~~DVA~~iv~aL~~ 273 (306)
. +.+.....+...|++++.|+||++....... ....+. .......+..++|||.+++.++.+
T Consensus 166 l~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~~va~~~~~L~s~ 245 (265)
T PRK07062 166 LLNLVKSLATELAPKGVRVNSILLGLVESGQWRRRYEARADPGQSWEAWTAALARKKGIPLGRLGRPDEAARALFFLASP 245 (265)
T ss_pred HHHHHHHHHHHhhhcCeEEEEEecCccccchhhhHHHHhhccCCChHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHHhCc
Confidence 1 1222222344579999999999864322100 000000 011112356889999999998865
Q ss_pred CC--CCCcEEEEecC
Q 021854 274 IP--QTGLIFEVVNG 286 (306)
Q Consensus 274 ~~--~~g~~~~v~~g 286 (306)
.. -.|+++.+.+|
T Consensus 246 ~~~~~tG~~i~vdgg 260 (265)
T PRK07062 246 LSSYTTGSHIDVSGG 260 (265)
T ss_pred hhcccccceEEEcCc
Confidence 32 46788888765
|
|
| >PRK06139 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.59 E-value=8.1e-14 Score=130.67 Aligned_cols=179 Identities=12% Similarity=0.039 Sum_probs=120.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh------cCCCceeeeccCCCHHHHHHHh-------cCc
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTAL-------RGV 164 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~~-------~~~ 164 (306)
.+++|+||||+|+||++++++|+++|++|+++.|+.+++.+. .+.++.++.+|++|.+++++++ ..+
T Consensus 6 ~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 85 (330)
T PRK06139 6 HGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFGGRI 85 (330)
T ss_pred CCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence 468999999999999999999999999999999998764321 2346778899999999888776 357
Q ss_pred cEEEEcCCc----h--------------------------hhhcccccCCCEEEEecCcccccCCCCcccccchHHHH--
Q 021854 165 RSIICPSEG----F--------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK-- 212 (306)
Q Consensus 165 d~vi~~~~g----~--------------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~-- 212 (306)
|++|++++. . ......+.+..+||++||..++.+......|..+++..
T Consensus 86 D~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~~g~iV~isS~~~~~~~p~~~~Y~asKaal~~ 165 (330)
T PRK06139 86 DVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQGHGIFINMISLGGFAAQPYAAAYSASKFGLRG 165 (330)
T ss_pred CEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhcCCCCCchhHHHHHHHHHH
Confidence 999998431 0 01112334567899999988776665666665544321
Q ss_pred HHHHHHHHHHh-cCCCEEEEEcCcccCCCC-CCcceeeecCCCCccccCHHHHHHHHHHHhhCCCC
Q 021854 213 LAEQDESMLMA-SGIPYTIIRTGVLQNTPG-GKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQ 276 (306)
Q Consensus 213 ~~~~aE~~l~~-sgi~~tiiRPg~l~~~~~-~~~~~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~~ 276 (306)
+.+.....+.. .++.++.|.||++..... ......-.........++++|+|++++.+++.+..
T Consensus 166 ~~~sL~~El~~~~gI~V~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~pe~vA~~il~~~~~~~~ 231 (330)
T PRK06139 166 FSEALRGELADHPDIHVCDVYPAFMDTPGFRHGANYTGRRLTPPPPVYDPRRVAKAVVRLADRPRA 231 (330)
T ss_pred HHHHHHHHhCCCCCeEEEEEecCCccCcccccccccccccccCCCCCCCHHHHHHHHHHHHhCCCC
Confidence 11111122333 489999999998653321 11111000111123467999999999999987643
|
|
| >PRK07856 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.59 E-value=6.5e-14 Score=125.60 Aligned_cols=188 Identities=16% Similarity=0.191 Sum_probs=123.7
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcC-------ccEEEE
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRG-------VRSIIC 169 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~-------~d~vi~ 169 (306)
..+++++||||+|+||++++++|+++|++|+++.|+.++ ...+..+.++.+|+.|.++++++++. +|++||
T Consensus 4 ~~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~--~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~ 81 (252)
T PRK07856 4 LTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE--TVDGRPAEFHAADVRDPDQVAALVDAIVERHGRLDVLVN 81 (252)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh--hhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 357999999999999999999999999999999998755 12334688999999999888877754 599999
Q ss_pred cCCch--------------------------hhhc----cc-ccCCCEEEEecCcccccCCCCcccccchHHHHHHHHHH
Q 021854 170 PSEGF--------------------------ISNA----GS-LKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDE 218 (306)
Q Consensus 170 ~~~g~--------------------------~~~~----a~-~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~~~~~aE 218 (306)
+++.. +.+. +. +.+..+||++||..+..+......|..+++.... .++
T Consensus 82 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~a~~~-l~~ 160 (252)
T PRK07856 82 NAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRRPSPGTAAYGAAKAGLLN-LTR 160 (252)
T ss_pred CCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCCCCCCCchhHHHHHHHHH-HHH
Confidence 84310 1111 11 1245789999999887766555666554332111 111
Q ss_pred HHHHh--cCCCEEEEEcCcccCCCCCC---cce---eeecCCCCccccCHHHHHHHHHHHhhCCC--CCCcEEEEecCC
Q 021854 219 SMLMA--SGIPYTIIRTGVLQNTPGGK---QGF---QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVNGE 287 (306)
Q Consensus 219 ~~l~~--sgi~~tiiRPg~l~~~~~~~---~~~---~~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~~~v~~g~ 287 (306)
.+-.+ ..+.+..|+||.+....... ... .+........+..++|+|++++.++.... ..|+.+.+.+|.
T Consensus 161 ~la~e~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~va~~~~~L~~~~~~~i~G~~i~vdgg~ 239 (252)
T PRK07856 161 SLAVEWAPKVRVNAVVVGLVRTEQSELHYGDAEGIAAVAATVPLGRLATPADIAWACLFLASDLASYVSGANLEVHGGG 239 (252)
T ss_pred HHHHHhcCCeEEEEEEeccccChHHhhhccCHHHHHHHhhcCCCCCCcCHHHHHHHHHHHcCcccCCccCCEEEECCCc
Confidence 11111 23899999999864322110 000 00011112335678999999999887543 467888888765
|
|
| >PRK05867 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.59 E-value=1e-13 Score=124.38 Aligned_cols=191 Identities=15% Similarity=0.115 Sum_probs=123.5
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh------cCCCceeeeccCCCHHHHHHHhc-------C
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------G 163 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~~~-------~ 163 (306)
..+++++||||+|+||++++++|+++|++|+++.|+.++.++. .+.++..+.+|++|+++++++++ .
T Consensus 7 ~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 86 (253)
T PRK05867 7 LHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAELGG 86 (253)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 3478999999999999999999999999999999987663322 13467788999999988877664 6
Q ss_pred ccEEEEcCCch--------------------------hhhc----ccccC-CCEEEEecCcccccCC--CCcccccchHH
Q 021854 164 VRSIICPSEGF--------------------------ISNA----GSLKG-VQHVILLSQLSVYRGS--GGIQALMKGNA 210 (306)
Q Consensus 164 ~d~vi~~~~g~--------------------------~~~~----a~~~g-vkr~V~iSS~~~~~~~--~~~~~~~~~~a 210 (306)
+|++||+++.. +.++ +.+.+ -.++|++||..+.... .....|..+++
T Consensus 87 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~~Y~asKa 166 (253)
T PRK05867 87 IDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHIINVPQQVSHYCASKA 166 (253)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhcCCCCCCCccchHHHHH
Confidence 79999984310 0111 12222 3579999987664321 22345654433
Q ss_pred HH--HHHHHHHHHHhcCCCEEEEEcCcccCCCCCCc-ce--eeecCCCCccccCHHHHHHHHHHHhhCCC--CCCcEEEE
Q 021854 211 RK--LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQ-GF--QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEV 283 (306)
Q Consensus 211 ~~--~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~~-~~--~~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~~~v 283 (306)
.. +.+.....+...||++..|+||++........ .. .+........+.+++|||+++..++.... -.|+++.+
T Consensus 167 al~~~~~~la~e~~~~gI~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~r~~~p~~va~~~~~L~s~~~~~~tG~~i~v 246 (253)
T PRK05867 167 AVIHLTKAMAVELAPHKIRVNSVSPGYILTELVEPYTEYQPLWEPKIPLGRLGRPEELAGLYLYLASEASSYMTGSDIVI 246 (253)
T ss_pred HHHHHHHHHHHHHhHhCeEEEEeecCCCCCcccccchHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCcccCCcCCCeEEE
Confidence 21 11222223445799999999998753321110 00 01011122346789999999999987543 45788888
Q ss_pred ecCC
Q 021854 284 VNGE 287 (306)
Q Consensus 284 ~~g~ 287 (306)
.+|.
T Consensus 247 dgG~ 250 (253)
T PRK05867 247 DGGY 250 (253)
T ss_pred CCCc
Confidence 8763
|
|
| >PRK08324 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.59 E-value=3.8e-14 Score=144.84 Aligned_cols=190 Identities=17% Similarity=0.176 Sum_probs=129.7
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh---cC--CCceeeeccCCCHHHHHHHhc-------Cc
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FG--TYVESMAGDASNKKFLKTALR-------GV 164 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~---~~--~~v~~v~~D~~d~~~l~~~~~-------~~ 164 (306)
..+++|+||||+|+||++++++|+++|++|++++|+.++.... .. ..+.++.+|++|.+++.++++ ++
T Consensus 420 l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~g~i 499 (681)
T PRK08324 420 LAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAFGGV 499 (681)
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 3568999999999999999999999999999999998764322 22 267889999999988877664 67
Q ss_pred cEEEEcCCch--------------------------h----hhcccccCC-CEEEEecCcccccCCCCcccccchHHHHH
Q 021854 165 RSIICPSEGF--------------------------I----SNAGSLKGV-QHVILLSQLSVYRGSGGIQALMKGNARKL 213 (306)
Q Consensus 165 d~vi~~~~g~--------------------------~----~~~a~~~gv-kr~V~iSS~~~~~~~~~~~~~~~~~a~~~ 213 (306)
|+|||+++.. + ...+++.+. .+||++||..+..+..+...|..+++...
T Consensus 500 DvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~~~~~~~~~Y~asKaa~~ 579 (681)
T PRK08324 500 DIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAVNPGPNFGAYGAAKAAEL 579 (681)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccccCCCCCcHHHHHHHHHHH
Confidence 9999984410 1 112234444 79999999888766656666654433221
Q ss_pred HHHHHHH---HHhcCCCEEEEEcCccc-CCCCCCc----------ce-------eeecCCCCccccCHHHHHHHHHHHhh
Q 021854 214 AEQDESM---LMASGIPYTIIRTGVLQ-NTPGGKQ----------GF-------QFEEGCAANGSLSKEDAAFICVEALE 272 (306)
Q Consensus 214 ~~~aE~~---l~~sgi~~tiiRPg~l~-~~~~~~~----------~~-------~~~~g~~~~~~Is~~DVA~~iv~aL~ 272 (306)
. .++.+ +...+|++++|+|+.+. +...... ++ .+..+.....+++.+|+|++++.++.
T Consensus 580 ~-l~~~la~e~~~~gIrvn~v~Pg~v~~~t~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~v~~~DvA~a~~~l~s 658 (681)
T PRK08324 580 H-LVRQLALELGPDGIRVNGVNPDAVVRGSGIWTGEWIEARAAAYGLSEEELEEFYRARNLLKREVTPEDVAEAVVFLAS 658 (681)
T ss_pred H-HHHHHHHHhcccCeEEEEEeCceeecCCccccchhhhhhhhhccCChHHHHHHHHhcCCcCCccCHHHHHHHHHHHhC
Confidence 1 11111 22357999999999973 2111000 00 01123333467899999999999884
Q ss_pred --CCCCCCcEEEEecCC
Q 021854 273 --SIPQTGLIFEVVNGE 287 (306)
Q Consensus 273 --~~~~~g~~~~v~~g~ 287 (306)
.....|+++++.+|.
T Consensus 659 ~~~~~~tG~~i~vdgG~ 675 (681)
T PRK08324 659 GLLSKTTGAIITVDGGN 675 (681)
T ss_pred ccccCCcCCEEEECCCc
Confidence 344568899999875
|
|
| >PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.59 E-value=1.1e-13 Score=122.58 Aligned_cols=187 Identities=14% Similarity=0.108 Sum_probs=123.0
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCH-HHHHHHhcCccEEEEcCCc--
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNK-KFLKTALRGVRSIICPSEG-- 173 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~-~~l~~~~~~~d~vi~~~~g-- 173 (306)
.++++++||||+|+||++++++|+++|++|+++.|+.... ...++.++.+|++|. +.+.+.+..+|++||+++.
T Consensus 3 l~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~id~lv~~ag~~~ 79 (235)
T PRK06550 3 FMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPD---LSGNFHFLQLDLSDDLEPLFDWVPSVDILCNTAGILD 79 (235)
T ss_pred CCCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCcccc---cCCcEEEEECChHHHHHHHHHhhCCCCEEEECCCCCC
Confidence 4578999999999999999999999999999999986442 234678899999987 5555556678999998431
Q ss_pred ---h----------------------hhh----cccccCCCEEEEecCcccccCCCCcccccchHHHH--HHHHHHHHHH
Q 021854 174 ---F----------------------ISN----AGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK--LAEQDESMLM 222 (306)
Q Consensus 174 ---~----------------------~~~----~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~--~~~~aE~~l~ 222 (306)
. +.. ...+.+.++||++||..+..+..+...|..+++.. +.+.....+.
T Consensus 80 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~ 159 (235)
T PRK06550 80 DYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIASFVAGGGGAAYTASKHALAGFTKQLALDYA 159 (235)
T ss_pred CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCCCCcccHHHHHHHHHHHHHHHHHhh
Confidence 0 001 12234456899999988776655555665543321 1122222234
Q ss_pred hcCCCEEEEEcCcccCCCCCCc---ce---eeecCCCCccccCHHHHHHHHHHHhhCCC--CCCcEEEEecC
Q 021854 223 ASGIPYTIIRTGVLQNTPGGKQ---GF---QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVNG 286 (306)
Q Consensus 223 ~sgi~~tiiRPg~l~~~~~~~~---~~---~~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~~~v~~g 286 (306)
..++++++|+||++........ .. .+........+.+++|+|.+++.++.+.. ..|.++.+.+|
T Consensus 160 ~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~~~~g~~~~~~gg 231 (235)
T PRK06550 160 KDGIQVFGIAPGAVKTPMTAADFEPGGLADWVARETPIKRWAEPEEVAELTLFLASGKADYMQGTIVPIDGG 231 (235)
T ss_pred hcCeEEEEEeeCCccCcccccccCchHHHHHHhccCCcCCCCCHHHHHHHHHHHcChhhccCCCcEEEECCc
Confidence 5689999999998643221100 00 00011122346788999999999996542 35777777765
|
|
| >PRK08277 D-mannonate oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.59 E-value=1e-13 Score=126.04 Aligned_cols=190 Identities=14% Similarity=0.135 Sum_probs=126.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh------cCCCceeeeccCCCHHHHHHHhc-------Cc
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GV 164 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~~~-------~~ 164 (306)
.+++++||||+|+||++++++|+++|++|+++.|+.+...+. .+.++.++.+|+.|.+++..+++ .+
T Consensus 9 ~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i 88 (278)
T PRK08277 9 KGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDFGPC 88 (278)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 468999999999999999999999999999999987653221 13457889999999888776654 67
Q ss_pred cEEEEcCCch---------------------------------------------hhhcccccCCCEEEEecCcccccCC
Q 021854 165 RSIICPSEGF---------------------------------------------ISNAGSLKGVQHVILLSQLSVYRGS 199 (306)
Q Consensus 165 d~vi~~~~g~---------------------------------------------~~~~a~~~gvkr~V~iSS~~~~~~~ 199 (306)
|++||+++.. +...+.+.+.++||++||..++.+.
T Consensus 89 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~ 168 (278)
T PRK08277 89 DILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRKGGNIINISSMNAFTPL 168 (278)
T ss_pred CEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhcCCC
Confidence 9999984310 0111233456789999999888776
Q ss_pred CCcccccchHHHH--HHHHHHHHHHhcCCCEEEEEcCcccCCCCCC-----cce---e---eecCCCCccccCHHHHHHH
Q 021854 200 GGIQALMKGNARK--LAEQDESMLMASGIPYTIIRTGVLQNTPGGK-----QGF---Q---FEEGCAANGSLSKEDAAFI 266 (306)
Q Consensus 200 ~~~~~~~~~~a~~--~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~-----~~~---~---~~~g~~~~~~Is~~DVA~~ 266 (306)
.+...|..+++.. +.+.....+...++++..|+||++....... ... . +........+..++|+|++
T Consensus 169 ~~~~~Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~ 248 (278)
T PRK08277 169 TKVPAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQNRALLFNEDGSLTERANKILAHTPMGRFGKPEELLGT 248 (278)
T ss_pred CCCchhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCcCcchhhhhccccccchhHHHHHhccCCccCCCCHHHHHHH
Confidence 6666675543321 1111112233468999999999965332100 000 0 0011112335678999999
Q ss_pred HHHHhhC-CC--CCCcEEEEecCC
Q 021854 267 CVEALES-IP--QTGLIFEVVNGE 287 (306)
Q Consensus 267 iv~aL~~-~~--~~g~~~~v~~g~ 287 (306)
++.++.. .. -.|+.+.+.+|.
T Consensus 249 ~~~l~s~~~~~~~tG~~i~vdgG~ 272 (278)
T PRK08277 249 LLWLADEKASSFVTGVVLPVDGGF 272 (278)
T ss_pred HHHHcCccccCCcCCCEEEECCCe
Confidence 9998876 32 357888887764
|
|
| >PRK12743 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.59 E-value=9.7e-14 Score=124.83 Aligned_cols=190 Identities=18% Similarity=0.118 Sum_probs=122.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCc-chhhh------hcCCCceeeeccCCCHHHHHHHhc-------C
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK-RNAME------SFGTYVESMAGDASNKKFLKTALR-------G 163 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~-~~~~~------~~~~~v~~v~~D~~d~~~l~~~~~-------~ 163 (306)
++++++||||+|+||++++++|+++|++|+++.|.. +.... ..+.++.++.+|++|+++++.+++ .
T Consensus 1 ~~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 80 (256)
T PRK12743 1 MAQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGR 80 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 468999999999999999999999999999886644 32211 124568899999999988777664 4
Q ss_pred ccEEEEcCCch--------------------------hhhc----cccc-CCCEEEEecCcccccCCCCcccccchHHHH
Q 021854 164 VRSIICPSEGF--------------------------ISNA----GSLK-GVQHVILLSQLSVYRGSGGIQALMKGNARK 212 (306)
Q Consensus 164 ~d~vi~~~~g~--------------------------~~~~----a~~~-gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~ 212 (306)
+|++||+++.. +.++ ..+. +-++||++||.....+..+...|..+++..
T Consensus 81 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~a~ 160 (256)
T PRK12743 81 IDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEHTPLPGASAYTAAKHAL 160 (256)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeeccccCCCCCcchhHHHHHHH
Confidence 69999984310 1111 1112 236899999987766666666665443321
Q ss_pred --HHHHHHHHHHhcCCCEEEEEcCcccCCCCCCc-ce---eeecCCCCccccCHHHHHHHHHHHhhCCC--CCCcEEEEe
Q 021854 213 --LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQ-GF---QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVV 284 (306)
Q Consensus 213 --~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~~-~~---~~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~~~v~ 284 (306)
+.+.....+...+++++.|+||.+........ .. ..........+.+++|+|.++..++.... ..|.++.+.
T Consensus 161 ~~l~~~la~~~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~d 240 (256)
T PRK12743 161 GGLTKAMALELVEHGILVNAVAPGAIATPMNGMDDSDVKPDSRPGIPLGRPGDTHEIASLVAWLCSEGASYTTGQSLIVD 240 (256)
T ss_pred HHHHHHHHHHhhhhCeEEEEEEeCCccCccccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCccccCcCCcEEEEC
Confidence 11111222345689999999998653321100 00 00011112335688999999999887543 357888887
Q ss_pred cCC
Q 021854 285 NGE 287 (306)
Q Consensus 285 ~g~ 287 (306)
+|.
T Consensus 241 gg~ 243 (256)
T PRK12743 241 GGF 243 (256)
T ss_pred CCc
Confidence 764
|
|
| >PRK08589 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.59 E-value=1e-13 Score=126.04 Aligned_cols=188 Identities=15% Similarity=0.065 Sum_probs=123.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhh---h---cCCCceeeeccCCCHHHHHHHhc-------Cc
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---S---FGTYVESMAGDASNKKFLKTALR-------GV 164 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~---~---~~~~v~~v~~D~~d~~~l~~~~~-------~~ 164 (306)
.+++++||||+++||++++++|+++|++|+++.|+ ++..+ . .+.++.++.+|++|.+++..+++ .+
T Consensus 5 ~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i 83 (272)
T PRK08589 5 ENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFGRV 83 (272)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcCCc
Confidence 47899999999999999999999999999999998 44221 1 23468889999999988776664 46
Q ss_pred cEEEEcCCc-----h--------------------------hhhcccccCCCEEEEecCcccccCCCCcccccchHHHH-
Q 021854 165 RSIICPSEG-----F--------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK- 212 (306)
Q Consensus 165 d~vi~~~~g-----~--------------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~- 212 (306)
|++||+++. . +...+.+.+ .++|++||...+.+......|..+++..
T Consensus 84 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~asKaal~ 162 (272)
T PRK08589 84 DVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQG-GSIINTSSFSGQAADLYRSGYNAAKGAVI 162 (272)
T ss_pred CEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEeCchhhcCCCCCCchHHHHHHHHH
Confidence 999998331 1 011122334 6999999988776655555665543321
Q ss_pred -HHHHHHHHHHhcCCCEEEEEcCcccCCCCCC----cc----eeee----cCCCCccccCHHHHHHHHHHHhhCCC--CC
Q 021854 213 -LAEQDESMLMASGIPYTIIRTGVLQNTPGGK----QG----FQFE----EGCAANGSLSKEDAAFICVEALESIP--QT 277 (306)
Q Consensus 213 -~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~----~~----~~~~----~g~~~~~~Is~~DVA~~iv~aL~~~~--~~ 277 (306)
+.+.....+...+|+++.|+||.+....... .. ..+. .......+.+++|+|++++.++.++. ..
T Consensus 163 ~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~ 242 (272)
T PRK08589 163 NFTKSIAIEYGRDGIRANAIAPGTIETPLVDKLTGTSEDEAGKTFRENQKWMTPLGRLGKPEEVAKLVVFLASDDSSFIT 242 (272)
T ss_pred HHHHHHHHHhhhcCeEEEEEecCcccCchhhhhcccchhhHHHHHhhhhhccCCCCCCcCHHHHHHHHHHHcCchhcCcC
Confidence 1122222234578999999999864321100 00 0000 00111235688999999999887533 46
Q ss_pred CcEEEEecCC
Q 021854 278 GLIFEVVNGE 287 (306)
Q Consensus 278 g~~~~v~~g~ 287 (306)
|+.+.+.+|.
T Consensus 243 G~~i~vdgg~ 252 (272)
T PRK08589 243 GETIRIDGGV 252 (272)
T ss_pred CCEEEECCCc
Confidence 7888887764
|
|
| >PRK06172 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.59 E-value=5.7e-14 Score=125.83 Aligned_cols=190 Identities=13% Similarity=0.075 Sum_probs=126.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhh------hcCCCceeeeccCCCHHHHHHHhc-------Cc
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTALR-------GV 164 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~------~~~~~v~~v~~D~~d~~~l~~~~~-------~~ 164 (306)
.+++|+||||+|+||++++++|+++|++|+++.|+.++..+ ..+.++.++.+|++|.+++..+++ .+
T Consensus 6 ~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~i 85 (253)
T PRK06172 6 SGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAYGRL 85 (253)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence 46899999999999999999999999999999998765321 123468889999999988877765 45
Q ss_pred cEEEEcCCc------h---------------------h----hhcccccCCCEEEEecCcccccCCCCcccccchHHHH-
Q 021854 165 RSIICPSEG------F---------------------I----SNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK- 212 (306)
Q Consensus 165 d~vi~~~~g------~---------------------~----~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~- 212 (306)
|++||+++. . + .....+.+..++|++||..++.+..+...|..+++..
T Consensus 86 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~sKaa~~ 165 (253)
T PRK06172 86 DYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGGGAIVNTASVAGLGAAPKMSIYAASKHAVI 165 (253)
T ss_pred CEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECchhhccCCCCCchhHHHHHHHH
Confidence 999998331 0 0 0112234557899999988877666666665543321
Q ss_pred -HHHHHHHHHHhcCCCEEEEEcCcccCCCCCC----ccee---eecCCCCccccCHHHHHHHHHHHhhCCC--CCCcEEE
Q 021854 213 -LAEQDESMLMASGIPYTIIRTGVLQNTPGGK----QGFQ---FEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFE 282 (306)
Q Consensus 213 -~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~----~~~~---~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~~~ 282 (306)
+.+.....+...++++..|+||.+....... .... +........+.+++|+|..+++++.+.. ..|+.+.
T Consensus 166 ~~~~~la~e~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ia~~~~~l~~~~~~~~~G~~i~ 245 (253)
T PRK06172 166 GLTKSAAIEYAKKGIRVNAVCPAVIDTDMFRRAYEADPRKAEFAAAMHPVGRIGKVEEVASAVLYLCSDGASFTTGHALM 245 (253)
T ss_pred HHHHHHHHHhcccCeEEEEEEeCCccChhhhhhcccChHHHHHHhccCCCCCccCHHHHHHHHHHHhCccccCcCCcEEE
Confidence 1111122233468999999999864322110 0000 0011111335689999999999987543 4678888
Q ss_pred EecCC
Q 021854 283 VVNGE 287 (306)
Q Consensus 283 v~~g~ 287 (306)
+.+|.
T Consensus 246 ~dgg~ 250 (253)
T PRK06172 246 VDGGA 250 (253)
T ss_pred ECCCc
Confidence 88764
|
|
| >PRK12937 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.59 E-value=7.8e-14 Score=123.99 Aligned_cols=190 Identities=14% Similarity=0.099 Sum_probs=122.6
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchh-h------hhcCCCceeeeccCCCHHHHHHHhc-------
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-M------ESFGTYVESMAGDASNKKFLKTALR------- 162 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~-~------~~~~~~v~~v~~D~~d~~~l~~~~~------- 162 (306)
.++++++||||+|+||++++++|+++|++|+++.|+.+.. . ...+.++.++.+|++|.++++++++
T Consensus 3 ~~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 82 (245)
T PRK12937 3 LSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAFG 82 (245)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 3578999999999999999999999999998887765431 1 1123468899999999998888776
Q ss_pred CccEEEEcCCch--------------------------hhhcccc--cCCCEEEEecCcccccCCCCcccccchHHHH--
Q 021854 163 GVRSIICPSEGF--------------------------ISNAGSL--KGVQHVILLSQLSVYRGSGGIQALMKGNARK-- 212 (306)
Q Consensus 163 ~~d~vi~~~~g~--------------------------~~~~a~~--~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~-- 212 (306)
++|++||+++.. +...+.. ...+++|++||.....+......|..+++..
T Consensus 83 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~ 162 (245)
T PRK12937 83 RIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTSVIALPLPGYGPYAASKAAVEG 162 (245)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeeccccCCCCCCchhHHHHHHHHH
Confidence 579999984310 0111111 1235899999987766655555665443321
Q ss_pred HHHHHHHHHHhcCCCEEEEEcCcccCCCC--CCccee---eecCCCCccccCHHHHHHHHHHHhhCCC--CCCcEEEEec
Q 021854 213 LAEQDESMLMASGIPYTIIRTGVLQNTPG--GKQGFQ---FEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVN 285 (306)
Q Consensus 213 ~~~~aE~~l~~sgi~~tiiRPg~l~~~~~--~~~~~~---~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~~~v~~ 285 (306)
+.+.....+...++.+++++||++..... ...... +........+.+++|+|+++..++..+. ..|+.+++.+
T Consensus 163 ~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~~ 242 (245)
T PRK12937 163 LVHVLANELRGRGITVNAVAPGPVATELFFNGKSAEQIDQLAGLAPLERLGTPEEIAAAVAFLAGPDGAWVNGQVLRVNG 242 (245)
T ss_pred HHHHHHHHhhhcCeEEEEEEeCCccCchhcccCCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCccccCccccEEEeCC
Confidence 11111122334689999999998653321 100000 0011122345688999999999886543 3477888875
Q ss_pred C
Q 021854 286 G 286 (306)
Q Consensus 286 g 286 (306)
+
T Consensus 243 g 243 (245)
T PRK12937 243 G 243 (245)
T ss_pred C
Confidence 4
|
|
| >PLN02253 xanthoxin dehydrogenase | Back alignment and domain information |
|---|
Probab=99.58 E-value=1.4e-13 Score=125.42 Aligned_cols=191 Identities=13% Similarity=0.080 Sum_probs=123.6
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhh---hc--CCCceeeeccCCCHHHHHHHhc-------Cc
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SF--GTYVESMAGDASNKKFLKTALR-------GV 164 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~---~~--~~~v~~v~~D~~d~~~l~~~~~-------~~ 164 (306)
..+++++||||+|+||++++++|+++|++|+++.|+.+...+ .. +.++.++.+|++|.++++++++ .+
T Consensus 16 l~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g~i 95 (280)
T PLN02253 16 LLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDKFGTL 95 (280)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence 347899999999999999999999999999999988754321 11 2368899999999998888776 57
Q ss_pred cEEEEcCCch----------------------------hhhcc----cccCCCEEEEecCcccccCCCCcccccchHHHH
Q 021854 165 RSIICPSEGF----------------------------ISNAG----SLKGVQHVILLSQLSVYRGSGGIQALMKGNARK 212 (306)
Q Consensus 165 d~vi~~~~g~----------------------------~~~~a----~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~ 212 (306)
|++||+++.. +.+++ .+.+..++|++||..+..+......|..+++..
T Consensus 96 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~a~ 175 (280)
T PLN02253 96 DIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASAIGGLGPHAYTGSKHAV 175 (280)
T ss_pred CEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChhhcccCCCCcccHHHHHHH
Confidence 9999983310 00111 123446899999887654444444565443321
Q ss_pred --HHHHHHHHHHhcCCCEEEEEcCcccCCCC-----CCc---cee-----e-ecCCCC-ccccCHHHHHHHHHHHhhCCC
Q 021854 213 --LAEQDESMLMASGIPYTIIRTGVLQNTPG-----GKQ---GFQ-----F-EEGCAA-NGSLSKEDAAFICVEALESIP 275 (306)
Q Consensus 213 --~~~~aE~~l~~sgi~~tiiRPg~l~~~~~-----~~~---~~~-----~-~~g~~~-~~~Is~~DVA~~iv~aL~~~~ 275 (306)
+.+.....+...+++++.++||.+..... ... ... + ...... ...++++|+|++++.++....
T Consensus 176 ~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~dva~~~~~l~s~~~ 255 (280)
T PLN02253 176 LGLTRSVAAELGKHGIRVNCVSPYAVPTALALAHLPEDERTEDALAGFRAFAGKNANLKGVELTVDDVANAVLFLASDEA 255 (280)
T ss_pred HHHHHHHHHHhhhcCeEEEEEeeCcccccccccccccccchhhhhhhhHHHhhcCCCCcCCCCCHHHHHHHHHhhcCccc
Confidence 11112222334689999999998643211 000 000 0 001111 224789999999999887543
Q ss_pred --CCCcEEEEecCC
Q 021854 276 --QTGLIFEVVNGE 287 (306)
Q Consensus 276 --~~g~~~~v~~g~ 287 (306)
-.|+.+.+.+|.
T Consensus 256 ~~i~G~~i~vdgG~ 269 (280)
T PLN02253 256 RYISGLNLMIDGGF 269 (280)
T ss_pred ccccCcEEEECCch
Confidence 357889998765
|
|
| >PRK06101 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=8.2e-14 Score=124.23 Aligned_cols=169 Identities=18% Similarity=0.127 Sum_probs=115.2
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhc--CCCceeeeccCCCHHHHHHHhcCc----cEEEEcCCc
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF--GTYVESMAGDASNKKFLKTALRGV----RSIICPSEG 173 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~--~~~v~~v~~D~~d~~~l~~~~~~~----d~vi~~~~g 173 (306)
++++||||+|+||++++++|+++|++|+++.|+.++.++.. ..++.++.+|++|+++++++++.+ |.+|++++.
T Consensus 2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~d~~i~~ag~ 81 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQSANIFTLAFDVTDHPGTKAALSQLPFIPELWIFNAGD 81 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCCCeEEEeeCCCHHHHHHHHHhcccCCCEEEEcCcc
Confidence 68999999999999999999999999999999987654332 246888999999999999988763 677765321
Q ss_pred --h------------------------hhhcccc--cCCCEEEEecCcccccCCCCcccccchHHHH--HHHHHHHHHHh
Q 021854 174 --F------------------------ISNAGSL--KGVQHVILLSQLSVYRGSGGIQALMKGNARK--LAEQDESMLMA 223 (306)
Q Consensus 174 --~------------------------~~~~a~~--~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~--~~~~aE~~l~~ 223 (306)
. +.+++.. .+.+++|++||.....+......|..+++.. +.+.....+..
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~l~~e~~~ 161 (240)
T PRK06101 82 CEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCGHRVVIVGSIASELALPRAEAYGASKAAVAYFARTLQLDLRP 161 (240)
T ss_pred cccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCeEEEEechhhccCCCCCchhhHHHHHHHHHHHHHHHHHHh
Confidence 0 0111111 1235799999987666555555665443321 11222222456
Q ss_pred cCCCEEEEEcCcccCCCCCCcceeeecCCCCccccCHHHHHHHHHHHhhCC
Q 021854 224 SGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESI 274 (306)
Q Consensus 224 sgi~~tiiRPg~l~~~~~~~~~~~~~~g~~~~~~Is~~DVA~~iv~aL~~~ 274 (306)
.+++++++|||++.......... .....++++|+|+.++..++..
T Consensus 162 ~gi~v~~v~pg~i~t~~~~~~~~------~~~~~~~~~~~a~~i~~~i~~~ 206 (240)
T PRK06101 162 KGIEVVTVFPGFVATPLTDKNTF------AMPMIITVEQASQEIRAQLARG 206 (240)
T ss_pred cCceEEEEeCCcCCCCCcCCCCC------CCCcccCHHHHHHHHHHHHhcC
Confidence 79999999999975432211111 0112479999999999999864
|
|
| >PRK06483 dihydromonapterin reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=6.6e-14 Score=124.22 Aligned_cols=189 Identities=15% Similarity=0.168 Sum_probs=121.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhc-CCCceeeeccCCCHHHHHHHhc-------CccEEEE
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF-GTYVESMAGDASNKKFLKTALR-------GVRSIIC 169 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~-~~~v~~v~~D~~d~~~l~~~~~-------~~d~vi~ 169 (306)
|+++++||||+|+||++++++|+++|++|+++.|+.+...+.. ..++.++.+|++|.++++.+++ .+|++||
T Consensus 1 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~ 80 (236)
T PRK06483 1 MPAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDGLRQAGAQCIQADFSTNAGIMAFIDELKQHTDGLRAIIH 80 (236)
T ss_pred CCceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCEEEEcCCCCHHHHHHHHHHHHhhCCCccEEEE
Confidence 4689999999999999999999999999999999876532221 2247789999999888766553 4799999
Q ss_pred cCCch------------------------------hhhcccccC--CCEEEEecCcccccCCCCcccccchHHHHHHHHH
Q 021854 170 PSEGF------------------------------ISNAGSLKG--VQHVILLSQLSVYRGSGGIQALMKGNARKLAEQD 217 (306)
Q Consensus 170 ~~~g~------------------------------~~~~a~~~g--vkr~V~iSS~~~~~~~~~~~~~~~~~a~~~~~~a 217 (306)
+++.. +...+.+.+ ..++|++||..+..+......|..+++.... .+
T Consensus 81 ~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~asKaal~~-l~ 159 (236)
T PRK06483 81 NASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVEKGSDKHIAYAASKAALDN-MT 159 (236)
T ss_pred CCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhccCCCCCccHHHHHHHHHH-HH
Confidence 84310 011122233 4689999998776555555566554332111 11
Q ss_pred HHHHHh--cCCCEEEEEcCcccCCCCCCcce--eeecCCCCccccCHHHHHHHHHHHhhCCCCCCcEEEEecCC
Q 021854 218 ESMLMA--SGIPYTIIRTGVLQNTPGGKQGF--QFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVVNGE 287 (306)
Q Consensus 218 E~~l~~--sgi~~tiiRPg~l~~~~~~~~~~--~~~~g~~~~~~Is~~DVA~~iv~aL~~~~~~g~~~~v~~g~ 287 (306)
+.+-++ .++++..|+||++.......... .........-...++|+|+++..++....-.|+++.+.+|.
T Consensus 160 ~~~a~e~~~~irvn~v~Pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~G~~i~vdgg~ 233 (236)
T PRK06483 160 LSFAAKLAPEVKVNSIAPALILFNEGDDAAYRQKALAKSLLKIEPGEEEIIDLVDYLLTSCYVTGRSLPVDGGR 233 (236)
T ss_pred HHHHHHHCCCcEEEEEccCceecCCCCCHHHHHHHhccCccccCCCHHHHHHHHHHHhcCCCcCCcEEEeCccc
Confidence 111111 35999999999864222111100 00001111224578999999999997555678888887663
|
|
| >PRK09072 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=5.3e-14 Score=126.93 Aligned_cols=176 Identities=14% Similarity=0.119 Sum_probs=116.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh-----cCCCceeeeccCCCHHHHHHHhc------CccE
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-----FGTYVESMAGDASNKKFLKTALR------GVRS 166 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~-----~~~~v~~v~~D~~d~~~l~~~~~------~~d~ 166 (306)
.+++++||||+|+||++++++|+++|++|++++|+.++..+. .+.++.++.+|++|.++++.+++ .+|+
T Consensus 4 ~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~id~ 83 (263)
T PRK09072 4 KDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARAREMGGINV 83 (263)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHhcCCCCE
Confidence 468999999999999999999999999999999998664322 23478899999999988776654 5699
Q ss_pred EEEcCCch--------------------------hhhc----ccccCCCEEEEecCcccccCCCCcccccchHHHH--HH
Q 021854 167 IICPSEGF--------------------------ISNA----GSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK--LA 214 (306)
Q Consensus 167 vi~~~~g~--------------------------~~~~----a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~--~~ 214 (306)
+||+++.. +.+. ..+.+.+++|++||..+..+..+...|..+++.. +.
T Consensus 84 lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~ 163 (263)
T PRK09072 84 LINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGSTFGSIGYPGYASYCASKFALRGFS 163 (263)
T ss_pred EEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecChhhCcCCCCccHHHHHHHHHHHHH
Confidence 99984310 0111 2234457899999887665555555565443321 11
Q ss_pred HHHHHHHHhcCCCEEEEEcCcccCCCCCCcceeeecCCCCccccCHHHHHHHHHHHhhCC
Q 021854 215 EQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESI 274 (306)
Q Consensus 215 ~~aE~~l~~sgi~~tiiRPg~l~~~~~~~~~~~~~~g~~~~~~Is~~DVA~~iv~aL~~~ 274 (306)
+.....+...++.++.+.||++............ .........+++|+|+.++.++++.
T Consensus 164 ~~l~~~~~~~~i~v~~v~Pg~~~t~~~~~~~~~~-~~~~~~~~~~~~~va~~i~~~~~~~ 222 (263)
T PRK09072 164 EALRRELADTGVRVLYLAPRATRTAMNSEAVQAL-NRALGNAMDDPEDVAAAVLQAIEKE 222 (263)
T ss_pred HHHHHHhcccCcEEEEEecCcccccchhhhcccc-cccccCCCCCHHHHHHHHHHHHhCC
Confidence 1122223346899999999986432211100000 0011124678999999999999865
|
|
| >PRK07035 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=1.1e-13 Score=123.78 Aligned_cols=191 Identities=10% Similarity=0.043 Sum_probs=125.5
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh------cCCCceeeeccCCCHHHHHHHhc-------C
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------G 163 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~~~-------~ 163 (306)
.++++++||||+|+||.+++++|+++|++|+++.|+.++.... .+..+.++.+|+.|.++++.+++ .
T Consensus 6 l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 85 (252)
T PRK07035 6 LTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERHGR 85 (252)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 4568999999999999999999999999999999987653221 12356788999999888776654 4
Q ss_pred ccEEEEcCCch-------------------------------hhhcccccCCCEEEEecCcccccCCCCcccccchHHHH
Q 021854 164 VRSIICPSEGF-------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK 212 (306)
Q Consensus 164 ~d~vi~~~~g~-------------------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~ 212 (306)
+|++||+++.. ..+.+.+.+.+++|++||.....+..+...|..+++..
T Consensus 86 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~al 165 (252)
T PRK07035 86 LDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVASVNGVSPGDFQGIYSITKAAV 165 (252)
T ss_pred CCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEEEECchhhcCCCCCCcchHHHHHHH
Confidence 79999884310 11123445678999999987766555555564433211
Q ss_pred --HHHHHHHHHHhcCCCEEEEEcCcccCCCCCC---cceee---ecCCCCccccCHHHHHHHHHHHhhCCC--CCCcEEE
Q 021854 213 --LAEQDESMLMASGIPYTIIRTGVLQNTPGGK---QGFQF---EEGCAANGSLSKEDAAFICVEALESIP--QTGLIFE 282 (306)
Q Consensus 213 --~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~---~~~~~---~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~~~ 282 (306)
+.+.....+...+++++.|+||.+....... ....+ ...........++|+|+.+..++.+.. ..|+++.
T Consensus 166 ~~~~~~l~~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~ 245 (252)
T PRK07035 166 ISMTKAFAKECAPFGIRVNALLPGLTDTKFASALFKNDAILKQALAHIPLRRHAEPSEMAGAVLYLASDASSYTTGECLN 245 (252)
T ss_pred HHHHHHHHHHHhhcCEEEEEEeeccccCcccccccCCHHHHHHHHccCCCCCcCCHHHHHHHHHHHhCccccCccCCEEE
Confidence 1111111233468999999999865322110 00000 001112346688999999999887653 3578888
Q ss_pred EecCC
Q 021854 283 VVNGE 287 (306)
Q Consensus 283 v~~g~ 287 (306)
+.+|-
T Consensus 246 ~dgg~ 250 (252)
T PRK07035 246 VDGGY 250 (252)
T ss_pred eCCCc
Confidence 87653
|
|
| >PRK09134 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=8.4e-14 Score=125.27 Aligned_cols=188 Identities=16% Similarity=0.175 Sum_probs=121.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcc-hhh---h---hcCCCceeeeccCCCHHHHHHHhc-------C
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR-NAM---E---SFGTYVESMAGDASNKKFLKTALR-------G 163 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~-~~~---~---~~~~~v~~v~~D~~d~~~l~~~~~-------~ 163 (306)
++++++||||+|+||++++++|+++|++|+++.|... ... . ..+..+.++.+|++|.+++.++++ .
T Consensus 8 ~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~ 87 (258)
T PRK09134 8 APRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAALGP 87 (258)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 4689999999999999999999999999988876542 221 1 123468889999999988887765 3
Q ss_pred ccEEEEcCCch--------------------------hhhc----ccccCCCEEEEecCcccccCCCCcccccchHHHHH
Q 021854 164 VRSIICPSEGF--------------------------ISNA----GSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKL 213 (306)
Q Consensus 164 ~d~vi~~~~g~--------------------------~~~~----a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~~ 213 (306)
+|+|||+++.. +.++ ....+-+++|+++|...+.+......|..+++..
T Consensus 88 iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~~~~~~~p~~~~Y~~sK~a~- 166 (258)
T PRK09134 88 ITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQRVWNLNPDFLSYTLSKAAL- 166 (258)
T ss_pred CCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECchhhcCCCCCchHHHHHHHHH-
Confidence 69999984310 1111 1223346889888876655444444565433211
Q ss_pred HHHHHHHHH-h--cCCCEEEEEcCcccCCCCCC-ccee-eecCCCCccccCHHHHHHHHHHHhhCCCCCCcEEEEecCC
Q 021854 214 AEQDESMLM-A--SGIPYTIIRTGVLQNTPGGK-QGFQ-FEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVVNGE 287 (306)
Q Consensus 214 ~~~aE~~l~-~--sgi~~tiiRPg~l~~~~~~~-~~~~-~~~g~~~~~~Is~~DVA~~iv~aL~~~~~~g~~~~v~~g~ 287 (306)
....+.+. + ..+.++.|+||++....... ..+. ...........+++|+|++++.+++.+...|+.|.+.+|.
T Consensus 167 -~~~~~~la~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~~~~~g~~~~i~gg~ 244 (258)
T PRK09134 167 -WTATRTLAQALAPRIRVNAIGPGPTLPSGRQSPEDFARQHAATPLGRGSTPEEIAAAVRYLLDAPSVTGQMIAVDGGQ 244 (258)
T ss_pred -HHHHHHHHHHhcCCcEEEEeecccccCCcccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHhcCCCcCCCEEEECCCe
Confidence 11111121 1 24999999999864322111 0000 0001111235789999999999999777778899998865
|
|
| >PRK05693 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=1.7e-13 Score=124.46 Aligned_cols=177 Identities=14% Similarity=0.098 Sum_probs=116.5
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhc-------CccEEEEcCC
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR-------GVRSIICPSE 172 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~-------~~d~vi~~~~ 172 (306)
|+++||||+|+||++++++|+++|++|++++|+.++.......++.++.+|++|.+.++++++ ++|++||+++
T Consensus 2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag 81 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALAAAGFTAVQLDVNDGAALARLAEELEAEHGGLDVLINNAG 81 (274)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECCC
Confidence 789999999999999999999999999999999876554444467889999999988877663 5799999843
Q ss_pred c----h----------------------hhhcc---cccCCCEEEEecCcccccCCCCcccccchHHHH--HHHHHHHHH
Q 021854 173 G----F----------------------ISNAG---SLKGVQHVILLSQLSVYRGSGGIQALMKGNARK--LAEQDESML 221 (306)
Q Consensus 173 g----~----------------------~~~~a---~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~--~~~~aE~~l 221 (306)
. . +...+ ...+.+++|++||..+..+......|..+++.. +.+.....+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~al~~~~~~l~~e~ 161 (274)
T PRK05693 82 YGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRSRGLVVNIGSVSGVLVTPFAGAYCASKAAVHALSDALRLEL 161 (274)
T ss_pred CCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCEEEEECCccccCCCCCccHHHHHHHHHHHHHHHHHHHh
Confidence 1 0 11111 112457899999987766555555565443321 111122224
Q ss_pred HhcCCCEEEEEcCcccCCCCCCcc----eeeecC---------------CCCccccCHHHHHHHHHHHhhCCCC
Q 021854 222 MASGIPYTIIRTGVLQNTPGGKQG----FQFEEG---------------CAANGSLSKEDAAFICVEALESIPQ 276 (306)
Q Consensus 222 ~~sgi~~tiiRPg~l~~~~~~~~~----~~~~~g---------------~~~~~~Is~~DVA~~iv~aL~~~~~ 276 (306)
...|++++.++||.+......... ...... .....+.+.+|+|+.++.++..+..
T Consensus 162 ~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~~~~~~~ 235 (274)
T PRK05693 162 APFGVQVMEVQPGAIASQFASNASREAEQLLAEQSPWWPLREHIQARARASQDNPTPAAEFARQLLAAVQQSPR 235 (274)
T ss_pred hhhCeEEEEEecCccccccccccccchhhcCCCCCccHHHHHHHHHHHHhccCCCCCHHHHHHHHHHHHhCCCC
Confidence 457999999999986432211100 000000 0012346899999999999986543
|
|
| >PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=1.3e-13 Score=124.43 Aligned_cols=190 Identities=15% Similarity=0.140 Sum_probs=122.6
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCc-chhhh-------hcCCCceeeeccCCCHHHHHHHhc------
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK-RNAME-------SFGTYVESMAGDASNKKFLKTALR------ 162 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~-~~~~~-------~~~~~v~~v~~D~~d~~~l~~~~~------ 162 (306)
.++|+++||||+++||++++++|+++|++|+++.|.. +.... ..+.++.++.+|++|+++++++++
T Consensus 6 l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 85 (260)
T PRK08416 6 MKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDEDF 85 (260)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhc
Confidence 3579999999999999999999999999998887643 33211 123467899999999988877664
Q ss_pred -CccEEEEcCC--------ch----------------------------hhhcccccCCCEEEEecCcccccCCCCcccc
Q 021854 163 -GVRSIICPSE--------GF----------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQAL 205 (306)
Q Consensus 163 -~~d~vi~~~~--------g~----------------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~ 205 (306)
.+|++||+++ +. +...+.+.+.++||++||..+..+......|
T Consensus 86 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y 165 (260)
T PRK08416 86 DRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVGGGSIISLSSTGNLVYIENYAGH 165 (260)
T ss_pred CCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccCCEEEEEEeccccccCCCCcccc
Confidence 4699998742 00 0011233445699999998776555555566
Q ss_pred cchHHHH--HHHHHHHHHHhcCCCEEEEEcCcccCCCCCC--c--ce--eeecCCCCccccCHHHHHHHHHHHhhCCC--
Q 021854 206 MKGNARK--LAEQDESMLMASGIPYTIIRTGVLQNTPGGK--Q--GF--QFEEGCAANGSLSKEDAAFICVEALESIP-- 275 (306)
Q Consensus 206 ~~~~a~~--~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~--~--~~--~~~~g~~~~~~Is~~DVA~~iv~aL~~~~-- 275 (306)
..+++.. +.+.....+...+++++.|+||++....... . .. .+........+.+++|+|.+++.++....
T Consensus 166 ~asK~a~~~~~~~la~el~~~gi~v~~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~r~~~p~~va~~~~~l~~~~~~~ 245 (260)
T PRK08416 166 GTSKAAVETMVKYAATELGEKNIRVNAVSGGPIDTDALKAFTNYEEVKAKTEELSPLNRMGQPEDLAGACLFLCSEKASW 245 (260)
T ss_pred hhhHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccChhhhhccCCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcChhhhc
Confidence 5543321 1122222334578999999999864332110 0 00 00011112336789999999999886542
Q ss_pred CCCcEEEEecC
Q 021854 276 QTGLIFEVVNG 286 (306)
Q Consensus 276 ~~g~~~~v~~g 286 (306)
..|+.+.+.+|
T Consensus 246 ~~G~~i~vdgg 256 (260)
T PRK08416 246 LTGQTIVVDGG 256 (260)
T ss_pred ccCcEEEEcCC
Confidence 35777877654
|
|
| >PRK06701 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=1.6e-13 Score=126.15 Aligned_cols=192 Identities=18% Similarity=0.197 Sum_probs=125.6
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchh----hhh---cCCCceeeeccCCCHHHHHHHhc------
Q 021854 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA----MES---FGTYVESMAGDASNKKFLKTALR------ 162 (306)
Q Consensus 96 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~----~~~---~~~~v~~v~~D~~d~~~l~~~~~------ 162 (306)
..++++++||||+|+||++++++|+++|++|+++.|+.+.. .+. .+.++.++.+|++|.+.+..+++
T Consensus 43 ~~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~ 122 (290)
T PRK06701 43 KLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVREL 122 (290)
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 44578999999999999999999999999999999876431 111 13457789999999988877664
Q ss_pred -CccEEEEcCCch---------------------------hhhcccc--cCCCEEEEecCcccccCCCCcccccchHHHH
Q 021854 163 -GVRSIICPSEGF---------------------------ISNAGSL--KGVQHVILLSQLSVYRGSGGIQALMKGNARK 212 (306)
Q Consensus 163 -~~d~vi~~~~g~---------------------------~~~~a~~--~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~ 212 (306)
.+|++||+++.. +..++.. ....+||++||..++.+......|..+++..
T Consensus 123 ~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~~sK~a~ 202 (290)
T PRK06701 123 GRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSITGYEGNETLIDYSATKGAI 202 (290)
T ss_pred CCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEecccccCCCCCcchhHHHHHHH
Confidence 469999884310 0111111 1236899999998877655555665443321
Q ss_pred --HHHHHHHHHHhcCCCEEEEEcCcccCCCCCCc--c--e-eeecCCCCccccCHHHHHHHHHHHhhCCC--CCCcEEEE
Q 021854 213 --LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQ--G--F-QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEV 283 (306)
Q Consensus 213 --~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~~--~--~-~~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~~~v 283 (306)
+.+.....+...+|+++.|+||.+........ . . .+........+.+++|+|+++..++.+.. ..|.++.+
T Consensus 203 ~~l~~~la~~~~~~gIrv~~i~pG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~ll~~~~~~~~G~~i~i 282 (290)
T PRK06701 203 HAFTRSLAQSLVQKGIRVNAVAPGPIWTPLIPSDFDEEKVSQFGSNTPMQRPGQPEELAPAYVFLASPDSSYITGQMLHV 282 (290)
T ss_pred HHHHHHHHHHhhhcCeEEEEEecCCCCCcccccccCHHHHHHHHhcCCcCCCcCHHHHHHHHHHHcCcccCCccCcEEEe
Confidence 11122222334689999999998543221100 0 0 01111122446789999999999998643 35788888
Q ss_pred ecCC
Q 021854 284 VNGE 287 (306)
Q Consensus 284 ~~g~ 287 (306)
.++.
T Consensus 283 dgg~ 286 (290)
T PRK06701 283 NGGV 286 (290)
T ss_pred CCCc
Confidence 8764
|
|
| >PRK09135 pteridine reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=1.2e-13 Score=122.85 Aligned_cols=185 Identities=16% Similarity=0.153 Sum_probs=118.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcch-hhh-------hcCCCceeeeccCCCHHHHHHHhc-------
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-AME-------SFGTYVESMAGDASNKKFLKTALR------- 162 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~-~~~-------~~~~~v~~v~~D~~d~~~l~~~~~------- 162 (306)
++++|+||||+|+||++++++|+++|++|+++.|+... ... ..+..+.++.+|++|.+++..+++
T Consensus 5 ~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 84 (249)
T PRK09135 5 SAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAAFG 84 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 45899999999999999999999999999999987533 111 112357889999999998888776
Q ss_pred CccEEEEcCCch--------------------------hhhcccc---cCCCEEEEecCcccccCCCCcccccchHHHHH
Q 021854 163 GVRSIICPSEGF--------------------------ISNAGSL---KGVQHVILLSQLSVYRGSGGIQALMKGNARKL 213 (306)
Q Consensus 163 ~~d~vi~~~~g~--------------------------~~~~a~~---~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~~ 213 (306)
.+|+|||+++.. +.+++.. ..-.+++.+++.....+..+...|..+++
T Consensus 85 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~--- 161 (249)
T PRK09135 85 RLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQRGAIVNITDIHAERPLKGYPVYCAAKA--- 161 (249)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCCeEEEEEeChhhcCCCCCchhHHHHHH---
Confidence 469999984310 1122211 12246777777655555455555654332
Q ss_pred HHHHHHHHH----h--cCCCEEEEEcCcccCCCCCC--ccee---eecCCCCccccCHHHHHHHHHHHhhCCC-CCCcEE
Q 021854 214 AEQDESMLM----A--SGIPYTIIRTGVLQNTPGGK--QGFQ---FEEGCAANGSLSKEDAAFICVEALESIP-QTGLIF 281 (306)
Q Consensus 214 ~~~aE~~l~----~--sgi~~tiiRPg~l~~~~~~~--~~~~---~~~g~~~~~~Is~~DVA~~iv~aL~~~~-~~g~~~ 281 (306)
.+|.+++ + .+++++++|||++....... .... ...........+++|+|+++..++.+.. ..|++|
T Consensus 162 --~~~~~~~~l~~~~~~~i~~~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~~~~~~g~~~ 239 (249)
T PRK09135 162 --ALEMLTRSLALELAPEVRVNAVAPGAILWPEDGNSFDEEARQAILARTPLKRIGTPEDIAEAVRFLLADASFITGQIL 239 (249)
T ss_pred --HHHHHHHHHHHHHCCCCeEEEEEeccccCccccccCCHHHHHHHHhcCCcCCCcCHHHHHHHHHHHcCccccccCcEE
Confidence 2233322 1 36999999999865332111 0000 0011111223468999999977665433 468899
Q ss_pred EEecCC
Q 021854 282 EVVNGE 287 (306)
Q Consensus 282 ~v~~g~ 287 (306)
++.+|.
T Consensus 240 ~i~~g~ 245 (249)
T PRK09135 240 AVDGGR 245 (249)
T ss_pred EECCCe
Confidence 999876
|
|
| >TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase | Back alignment and domain information |
|---|
Probab=99.57 E-value=1.2e-13 Score=122.07 Aligned_cols=185 Identities=16% Similarity=0.170 Sum_probs=119.6
Q ss_pred EEEEcCCChHHHHHHHHHHHCCCeEEEEecCcc-hhh---h---hcCCCceeeeccCCCHHHHHHHhcC-------ccEE
Q 021854 102 VLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR-NAM---E---SFGTYVESMAGDASNKKFLKTALRG-------VRSI 167 (306)
Q Consensus 102 ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~-~~~---~---~~~~~v~~v~~D~~d~~~l~~~~~~-------~d~v 167 (306)
|+|||++|+||+.++++|+++|++|+++.|+.. ... . ..+..+.++.+|++|.+++++++.+ +|+|
T Consensus 1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 80 (239)
T TIGR01830 1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPIDIL 80 (239)
T ss_pred CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 589999999999999999999999999998762 211 1 1123577899999999988777654 5999
Q ss_pred EEcCCch--------------------------hhhcc----cccCCCEEEEecCcccccCCCCcccccchHHHH--HHH
Q 021854 168 ICPSEGF--------------------------ISNAG----SLKGVQHVILLSQLSVYRGSGGIQALMKGNARK--LAE 215 (306)
Q Consensus 168 i~~~~g~--------------------------~~~~a----~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~--~~~ 215 (306)
||+++.. +.+.+ .+.+.++||++||..+..+......|..++... +.+
T Consensus 81 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~g~~~~~~y~~~k~a~~~~~~ 160 (239)
T TIGR01830 81 VNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVGLMGNAGQANYAASKAGVIGFTK 160 (239)
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCccccCCCCCCchhHHHHHHHHHHHH
Confidence 9983310 11112 224567999999987665555555554433211 112
Q ss_pred HHHHHHHhcCCCEEEEEcCcccCCCCCCcc-e---eeecCCCCccccCHHHHHHHHHHHhhCC--CCCCcEEEEecC
Q 021854 216 QDESMLMASGIPYTIIRTGVLQNTPGGKQG-F---QFEEGCAANGSLSKEDAAFICVEALESI--PQTGLIFEVVNG 286 (306)
Q Consensus 216 ~aE~~l~~sgi~~tiiRPg~l~~~~~~~~~-~---~~~~g~~~~~~Is~~DVA~~iv~aL~~~--~~~g~~~~v~~g 286 (306)
.....+...+++++++|||.+......... . .+........+.+++|+|++++.++... ...+++|++.+|
T Consensus 161 ~l~~~~~~~g~~~~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~~g 237 (239)
T TIGR01830 161 SLAKELASRNITVNAVAPGFIDTDMTDKLSEKVKKKILSQIPLGRFGTPEEVANAVAFLASDEASYITGQVIHVDGG 237 (239)
T ss_pred HHHHHHhhcCeEEEEEEECCCCChhhhhcChHHHHHHHhcCCcCCCcCHHHHHHHHHHHhCcccCCcCCCEEEeCCC
Confidence 222223357999999999986432211000 0 0001111234678999999999888554 346789998754
|
This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis. |
| >PRK12938 acetyacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=1.8e-13 Score=121.91 Aligned_cols=190 Identities=13% Similarity=0.107 Sum_probs=122.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecC-cchhh----h--hcCCCceeeeccCCCHHHHHHHhc-------C
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKD-KRNAM----E--SFGTYVESMAGDASNKKFLKTALR-------G 163 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~-~~~~~----~--~~~~~v~~v~~D~~d~~~l~~~~~-------~ 163 (306)
.+++++||||+|+||++++++|+++|++|+++.+. ..... + ..+..+..+.+|+.|.+++.++++ .
T Consensus 2 ~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 81 (246)
T PRK12938 2 SQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVGE 81 (246)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence 36899999999999999999999999999886543 22211 1 112356678899999988877664 5
Q ss_pred ccEEEEcCCch------------------------------hhhcccccCCCEEEEecCcccccCCCCcccccchHHHH-
Q 021854 164 VRSIICPSEGF------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK- 212 (306)
Q Consensus 164 ~d~vi~~~~g~------------------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~- 212 (306)
+|++||+++.. +...+.+.+.++||++||..+..+..+...|..+++..
T Consensus 82 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sK~a~~ 161 (246)
T PRK12938 82 IDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFGQTNYSTAKAGIH 161 (246)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEechhccCCCCCChhHHHHHHHHH
Confidence 79999984310 11223446678999999987665555555565433321
Q ss_pred -HHHHHHHHHHhcCCCEEEEEcCcccCCCCCC-ccee---eecCCCCccccCHHHHHHHHHHHhhCCC--CCCcEEEEec
Q 021854 213 -LAEQDESMLMASGIPYTIIRTGVLQNTPGGK-QGFQ---FEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVN 285 (306)
Q Consensus 213 -~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~-~~~~---~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~~~v~~ 285 (306)
+.+.....+...+++++.|+||++....... .+.. +..........+++|++.++..++.++. ..++.+.+.+
T Consensus 162 ~~~~~l~~~~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~l~~~~~~~~~g~~~~~~~ 241 (246)
T PRK12938 162 GFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIRPDVLEKIVATIPVRRLGSPDEIGSIVAWLASEESGFSTGADFSLNG 241 (246)
T ss_pred HHHHHHHHHhhhhCeEEEEEEecccCCchhhhcChHHHHHHHhcCCccCCcCHHHHHHHHHHHcCcccCCccCcEEEECC
Confidence 1122222234578999999999876432111 0000 0011122345688999999999886543 4678888876
Q ss_pred CC
Q 021854 286 GE 287 (306)
Q Consensus 286 g~ 287 (306)
+.
T Consensus 242 g~ 243 (246)
T PRK12938 242 GL 243 (246)
T ss_pred cc
Confidence 53
|
|
| >PRK05717 oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=99.57 E-value=1.8e-13 Score=122.90 Aligned_cols=190 Identities=15% Similarity=0.155 Sum_probs=122.1
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhh---hcCCCceeeeccCCCHHHHHHHhc-------CccE
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALR-------GVRS 166 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~---~~~~~v~~v~~D~~d~~~l~~~~~-------~~d~ 166 (306)
..+++++||||+|+||++++++|+++|++|+++.|+.++..+ ..+..+.++.+|++|.+++.++++ .+|+
T Consensus 8 ~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~ 87 (255)
T PRK05717 8 HNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKALGENAWFIAMDVADEAQVAAGVAEVLGQFGRLDA 87 (255)
T ss_pred cCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence 347899999999999999999999999999999888755332 234467889999999888765543 3699
Q ss_pred EEEcCCch----------------------------hhhccc---ccCCCEEEEecCcccccCCCCcccccchHHHHHHH
Q 021854 167 IICPSEGF----------------------------ISNAGS---LKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAE 215 (306)
Q Consensus 167 vi~~~~g~----------------------------~~~~a~---~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~~~~ 215 (306)
+||+++.. +.+++. ....+++|++||..+..+......|..+++....
T Consensus 88 li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~ii~~sS~~~~~~~~~~~~Y~~sKaa~~~- 166 (255)
T PRK05717 88 LVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHNGAIVNLASTRARQSEPDTEAYAASKGGLLA- 166 (255)
T ss_pred EEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCcEEEEEcchhhcCCCCCCcchHHHHHHHHH-
Confidence 99983310 111121 1223689999998877665555566544332111
Q ss_pred HHHHHHHh--cCCCEEEEEcCcccCCCCCCc-ceee----ecCCCCccccCHHHHHHHHHHHhhCCC--CCCcEEEEecC
Q 021854 216 QDESMLMA--SGIPYTIIRTGVLQNTPGGKQ-GFQF----EEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVNG 286 (306)
Q Consensus 216 ~aE~~l~~--sgi~~tiiRPg~l~~~~~~~~-~~~~----~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~~~v~~g 286 (306)
.++.+-++ .+++++.|+||++........ ...+ ..........+++|+|.++..++.... ..|+.+.+.++
T Consensus 167 ~~~~la~~~~~~i~v~~i~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~~gg 246 (255)
T PRK05717 167 LTHALAISLGPEIRVNAVSPGWIDARDPSQRRAEPLSEADHAQHPAGRVGTVEDVAAMVAWLLSRQAGFVTGQEFVVDGG 246 (255)
T ss_pred HHHHHHHHhcCCCEEEEEecccCcCCccccccchHHHHHHhhcCCCCCCcCHHHHHHHHHHHcCchhcCccCcEEEECCC
Confidence 11111112 358999999998654321110 0000 011122346788999999998886542 35778888765
Q ss_pred C
Q 021854 287 E 287 (306)
Q Consensus 287 ~ 287 (306)
.
T Consensus 247 ~ 247 (255)
T PRK05717 247 M 247 (255)
T ss_pred c
Confidence 3
|
|
| >PRK09242 tropinone reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=2.2e-13 Score=122.39 Aligned_cols=190 Identities=13% Similarity=0.110 Sum_probs=124.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh-------c-CCCceeeeccCCCHHHHHHHhc-------
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------F-GTYVESMAGDASNKKFLKTALR------- 162 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~-------~-~~~v~~v~~D~~d~~~l~~~~~------- 162 (306)
.+|+++||||+|+||++++++|+++|++|++++|+.+...+. . +.++.++.+|++|.++++.+++
T Consensus 8 ~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 87 (257)
T PRK09242 8 DGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDHWD 87 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 478999999999999999999999999999999988653221 1 2367788999999887766554
Q ss_pred CccEEEEcCCch--------------------------hh----hcccccCCCEEEEecCcccccCCCCcccccchHHHH
Q 021854 163 GVRSIICPSEGF--------------------------IS----NAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK 212 (306)
Q Consensus 163 ~~d~vi~~~~g~--------------------------~~----~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~ 212 (306)
.+|++|++++.. +. ..+.+.+.++||++||..+..+......|..++...
T Consensus 88 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~sK~a~ 167 (257)
T PRK09242 88 GLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHASSAIVNIGSVSGLTHVRSGAPYGMTKAAL 167 (257)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCceEEEECccccCCCCCCCcchHHHHHHH
Confidence 569999984320 11 112345567999999988877665655665443221
Q ss_pred --HHHHHHHHHHhcCCCEEEEEcCcccCCCCCCc----cee--eecCCCCccccCHHHHHHHHHHHhhCCC--CCCcEEE
Q 021854 213 --LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQ----GFQ--FEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFE 282 (306)
Q Consensus 213 --~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~~----~~~--~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~~~ 282 (306)
+.+.....+...+++++.|+||++........ ... ........-+.+++|+|.++..++.... ..|+.+.
T Consensus 168 ~~~~~~la~e~~~~~i~v~~i~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~i~ 247 (257)
T PRK09242 168 LQMTRNLAVEWAEDGIRVNAVAPWYIRTPLTSGPLSDPDYYEQVIERTPMRRVGEPEEVAAAVAFLCMPAASYITGQCIA 247 (257)
T ss_pred HHHHHHHHHHHHHhCeEEEEEEECCCCCcccccccCChHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcccccccCCEEE
Confidence 11111122345789999999998653321100 000 0001111234578999999999986543 3477888
Q ss_pred EecCC
Q 021854 283 VVNGE 287 (306)
Q Consensus 283 v~~g~ 287 (306)
+.++.
T Consensus 248 ~~gg~ 252 (257)
T PRK09242 248 VDGGF 252 (257)
T ss_pred ECCCe
Confidence 87654
|
|
| >PRK08213 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=1.5e-13 Score=123.71 Aligned_cols=190 Identities=15% Similarity=0.130 Sum_probs=120.6
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh------cCCCceeeeccCCCHHHHHHHhc-------C
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------G 163 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~~~-------~ 163 (306)
..+++++||||+|+||++++++|+++|++|+++.|+.++.... .+.++.++.+|++|.++++++++ .
T Consensus 10 ~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~~~ 89 (259)
T PRK08213 10 LSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERFGH 89 (259)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 3579999999999999999999999999999999987653221 12357789999999988866553 5
Q ss_pred ccEEEEcCCch--------------------------hhhcc-----cccCCCEEEEecCcccccCCCCc----ccccch
Q 021854 164 VRSIICPSEGF--------------------------ISNAG-----SLKGVQHVILLSQLSVYRGSGGI----QALMKG 208 (306)
Q Consensus 164 ~d~vi~~~~g~--------------------------~~~~a-----~~~gvkr~V~iSS~~~~~~~~~~----~~~~~~ 208 (306)
+|++||+++.. +.+++ ...+.++||++||...+.+..+. ..|..+
T Consensus 90 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~~~~~~~~~~~~~~Y~~s 169 (259)
T PRK08213 90 VDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGLGGNPPEVMDTIAYNTS 169 (259)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCccccCcchHHHH
Confidence 79999984310 11222 22367799999998765543321 344332
Q ss_pred HHHH--HHHHHHHHHHhcCCCEEEEEcCcccCCCCCCc-c-e--eeecCCCCccccCHHHHHHHHHHHhhCCC--CCCcE
Q 021854 209 NARK--LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQ-G-F--QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLI 280 (306)
Q Consensus 209 ~a~~--~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~~-~-~--~~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~ 280 (306)
++.. +.+.....+...++++++++||++........ . + .+........+...+|+|..+..++.... ..|+.
T Consensus 170 Ka~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~ 249 (259)
T PRK08213 170 KGAVINFTRALAAEWGPHGIRVNAIAPGFFPTKMTRGTLERLGEDLLAHTPLGRLGDDEDLKGAALLLASDASKHITGQI 249 (259)
T ss_pred HHHHHHHHHHHHHHhcccCEEEEEEecCcCCCcchhhhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccCCE
Confidence 2211 11111122224689999999998654321110 0 0 00011111223468999999988886543 35788
Q ss_pred EEEecC
Q 021854 281 FEVVNG 286 (306)
Q Consensus 281 ~~v~~g 286 (306)
+.+.++
T Consensus 250 ~~~~~~ 255 (259)
T PRK08213 250 LAVDGG 255 (259)
T ss_pred EEECCC
Confidence 887765
|
|
| >PRK06947 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=2.8e-13 Score=120.91 Aligned_cols=189 Identities=16% Similarity=0.147 Sum_probs=117.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEe-cCcchhhh------hcCCCceeeeccCCCHHHHHHHhc-------C
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALV-KDKRNAME------SFGTYVESMAGDASNKKFLKTALR-------G 163 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~-R~~~~~~~------~~~~~v~~v~~D~~d~~~l~~~~~-------~ 163 (306)
|+++|+||||+|+||+.++++|+++|++|+++. |+.++... ..+.++.++.+|++|.++++++++ .
T Consensus 1 m~k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 80 (248)
T PRK06947 1 MRKVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAFGR 80 (248)
T ss_pred CCcEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhcCC
Confidence 468999999999999999999999999998765 44443221 123468899999999888776554 5
Q ss_pred ccEEEEcCCch---------------------------hh-hcccc---cC---CCEEEEecCcccccCCC-Ccccccch
Q 021854 164 VRSIICPSEGF---------------------------IS-NAGSL---KG---VQHVILLSQLSVYRGSG-GIQALMKG 208 (306)
Q Consensus 164 ~d~vi~~~~g~---------------------------~~-~~a~~---~g---vkr~V~iSS~~~~~~~~-~~~~~~~~ 208 (306)
+|++||+++.. +. .+... .+ -.+||++||..+..+.. ....|..+
T Consensus 81 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~~Y~~s 160 (248)
T PRK06947 81 LDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRLGSPNEYVDYAGS 160 (248)
T ss_pred CCEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcCCCCCCCcccHhh
Confidence 79999984310 00 11111 11 24699999987654433 23356544
Q ss_pred HHHHH--HHHHHHHHHhcCCCEEEEEcCcccCCCCC--Ccce---eeecCCCCccccCHHHHHHHHHHHhhCCC--CCCc
Q 021854 209 NARKL--AEQDESMLMASGIPYTIIRTGVLQNTPGG--KQGF---QFEEGCAANGSLSKEDAAFICVEALESIP--QTGL 279 (306)
Q Consensus 209 ~a~~~--~~~aE~~l~~sgi~~tiiRPg~l~~~~~~--~~~~---~~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~ 279 (306)
++... .+.....+...++++++||||++...... +... ............+++|+|+.++.++.++. ..|+
T Consensus 161 K~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~e~va~~~~~l~~~~~~~~~G~ 240 (248)
T PRK06947 161 KGAVDTLTLGLAKELGPHGVRVNAVRPGLIETEIHASGGQPGRAARLGAQTPLGRAGEADEVAETIVWLLSDAASYVTGA 240 (248)
T ss_pred HHHHHHHHHHHHHHhhhhCcEEEEEeccCcccccccccCCHHHHHHHhhcCCCCCCcCHHHHHHHHHHHcCccccCcCCc
Confidence 33211 11111223346899999999986533211 1100 00011111235688999999999987654 4677
Q ss_pred EEEEecC
Q 021854 280 IFEVVNG 286 (306)
Q Consensus 280 ~~~v~~g 286 (306)
.+.+.+|
T Consensus 241 ~~~~~gg 247 (248)
T PRK06947 241 LLDVGGG 247 (248)
T ss_pred eEeeCCC
Confidence 7777654
|
|
| >PLN02778 3,5-epimerase/4-reductase | Back alignment and domain information |
|---|
Probab=99.57 E-value=3.2e-13 Score=124.80 Aligned_cols=179 Identities=10% Similarity=0.046 Sum_probs=116.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhc--CccEEEEcCCc--
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--GVRSIICPSEG-- 173 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~--~~d~vi~~~~g-- 173 (306)
+.|+||||||+||||++++++|+++|++|+... .|+.|.+.+...++ ++|+|||+++-
T Consensus 8 ~~~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~------------------~~~~~~~~v~~~l~~~~~D~ViH~Aa~~~ 69 (298)
T PLN02778 8 ATLKFLIYGKTGWIGGLLGKLCQEQGIDFHYGS------------------GRLENRASLEADIDAVKPTHVFNAAGVTG 69 (298)
T ss_pred CCCeEEEECCCCHHHHHHHHHHHhCCCEEEEec------------------CccCCHHHHHHHHHhcCCCEEEECCcccC
Confidence 458999999999999999999999999987432 33455566666665 67999998321
Q ss_pred ------h-----------------hhhcccccCCCEEEEecCcccccCCC------C--cc----cccc-hHHHHHHHHH
Q 021854 174 ------F-----------------ISNAGSLKGVQHVILLSQLSVYRGSG------G--IQ----ALMK-GNARKLAEQD 217 (306)
Q Consensus 174 ------~-----------------~~~~a~~~gvkr~V~iSS~~~~~~~~------~--~~----~~~~-~~a~~~~~~a 217 (306)
. +.++|++.+++++ ++||..++.... + .. +..+ +.+...|..+
T Consensus 70 ~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~gv~~v-~~sS~~vy~~~~~~p~~~~~~~~Ee~~p~~~~s~Yg~sK~~~ 148 (298)
T PLN02778 70 RPNVDWCESHKVETIRANVVGTLTLADVCRERGLVLT-NYATGCIFEYDDAHPLGSGIGFKEEDTPNFTGSFYSKTKAMV 148 (298)
T ss_pred CCCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCEE-EEecceEeCCCCCCCcccCCCCCcCCCCCCCCCchHHHHHHH
Confidence 0 3455777888754 456555442100 0 00 1111 2344567788
Q ss_pred HHHHHhcCCCEEEEEcCcccC-CCCC----------CcceeeecCCCCccccCHHHHHHHHHHHhhCCCCCCcEEEEecC
Q 021854 218 ESMLMASGIPYTIIRTGVLQN-TPGG----------KQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVVNG 286 (306)
Q Consensus 218 E~~l~~sgi~~tiiRPg~l~~-~~~~----------~~~~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~~~g~~~~v~~g 286 (306)
|.+++... +..++|+..... .... +..+.. . ...+++++|+++++..++.... +.+||++++
T Consensus 149 E~~~~~y~-~~~~lr~~~~~~~~~~~~~~fi~~~~~~~~~~~-~---~~s~~yv~D~v~al~~~l~~~~--~g~yNigs~ 221 (298)
T PLN02778 149 EELLKNYE-NVCTLRVRMPISSDLSNPRNFITKITRYEKVVN-I---PNSMTILDELLPISIEMAKRNL--TGIYNFTNP 221 (298)
T ss_pred HHHHHHhh-ccEEeeecccCCcccccHHHHHHHHHcCCCeeE-c---CCCCEEHHHHHHHHHHHHhCCC--CCeEEeCCC
Confidence 88887642 566788865322 1111 111111 1 1358899999999999986543 359999886
Q ss_pred C-cCHHHHHHHHHHHhh
Q 021854 287 E-EKVSDWKKCFSRLME 302 (306)
Q Consensus 287 ~-~s~~d~~~l~~~l~~ 302 (306)
+ .++.|+++++.++.+
T Consensus 222 ~~iS~~el~~~i~~~~~ 238 (298)
T PLN02778 222 GVVSHNEILEMYRDYID 238 (298)
T ss_pred CcccHHHHHHHHHHHhC
Confidence 5 588999888887765
|
|
| >PRK07814 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=1.5e-13 Score=124.25 Aligned_cols=189 Identities=16% Similarity=0.127 Sum_probs=122.8
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh------cCCCceeeeccCCCHHHHHHHhc-------C
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------G 163 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~~~-------~ 163 (306)
..+++++||||+|+||++++++|+++|++|++++|+.++..+. .+.++.++.+|++|.+++.++++ .
T Consensus 8 ~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 87 (263)
T PRK07814 8 LDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAFGR 87 (263)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 3478999999999999999999999999999999988653321 13467889999999988877665 5
Q ss_pred ccEEEEcCCch--------------------------hhhccc-----ccCCCEEEEecCcccccCCCCcccccchHHHH
Q 021854 164 VRSIICPSEGF--------------------------ISNAGS-----LKGVQHVILLSQLSVYRGSGGIQALMKGNARK 212 (306)
Q Consensus 164 ~d~vi~~~~g~--------------------------~~~~a~-----~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~ 212 (306)
+|+|||+++.. +.+++. ..+.++||++||..+..+..+...|..+++..
T Consensus 88 id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sK~a~ 167 (263)
T PRK07814 88 LDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGRLAGRGFAAYGTAKAAL 167 (263)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccccccCCCCCCchhHHHHHHH
Confidence 79999984310 111111 14567899999987766655556665443321
Q ss_pred HHHHHHHHHH--hcCCCEEEEEcCcccCCCCC----Cccee--eecCCCCccccCHHHHHHHHHHHhhCCC--CCCcEEE
Q 021854 213 LAEQDESMLM--ASGIPYTIIRTGVLQNTPGG----KQGFQ--FEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFE 282 (306)
Q Consensus 213 ~~~~aE~~l~--~sgi~~tiiRPg~l~~~~~~----~~~~~--~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~~~ 282 (306)
.. .++.+-. ..+++++.|+||++...... ...+. +..........+.+|+|++++.++.+.. ..++.+.
T Consensus 168 ~~-~~~~~~~e~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~ 246 (263)
T PRK07814 168 AH-YTRLAALDLCPRIRVNAIAPGSILTSALEVVAANDELRAPMEKATPLRRLGDPEDIAAAAVYLASPAGSYLTGKTLE 246 (263)
T ss_pred HH-HHHHHHHHHCCCceEEEEEeCCCcCchhhhccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCcCCCEEE
Confidence 11 1111111 13688999999986432211 00000 0000111234678999999999986532 4577888
Q ss_pred EecC
Q 021854 283 VVNG 286 (306)
Q Consensus 283 v~~g 286 (306)
+.++
T Consensus 247 ~~~~ 250 (263)
T PRK07814 247 VDGG 250 (263)
T ss_pred ECCC
Confidence 8765
|
|
| >PRK07985 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=3.4e-13 Score=124.28 Aligned_cols=191 Identities=18% Similarity=0.201 Sum_probs=123.0
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcc--hh---hh---hcCCCceeeeccCCCHHHHHHHhc------
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR--NA---ME---SFGTYVESMAGDASNKKFLKTALR------ 162 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~--~~---~~---~~~~~v~~v~~D~~d~~~l~~~~~------ 162 (306)
..+++++||||+|+||++++++|+++|++|+++.|+.+ .. .+ ..+.++.++.+|++|.+++.++++
T Consensus 47 ~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 126 (294)
T PRK07985 47 LKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKAL 126 (294)
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 45689999999999999999999999999998876542 21 11 123457789999999887766554
Q ss_pred -CccEEEEcCCc------h---------------------hhhcccc--cCCCEEEEecCcccccCCCCcccccchHHHH
Q 021854 163 -GVRSIICPSEG------F---------------------ISNAGSL--KGVQHVILLSQLSVYRGSGGIQALMKGNARK 212 (306)
Q Consensus 163 -~~d~vi~~~~g------~---------------------~~~~a~~--~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~ 212 (306)
.+|++||+++. . +..++.. ..-.+||++||..++.+......|..+++..
T Consensus 127 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~~~~~~~~~~~Y~asKaal 206 (294)
T PRK07985 127 GGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQAYQPSPHLLDYAATKAAI 206 (294)
T ss_pred CCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCchhccCCCCcchhHHHHHHH
Confidence 56999987431 0 1111111 1126899999998887666666676544322
Q ss_pred H--HHHHHHHHHhcCCCEEEEEcCcccCCCCC----Ccce--eeecCCCCccccCHHHHHHHHHHHhhCCC--CCCcEEE
Q 021854 213 L--AEQDESMLMASGIPYTIIRTGVLQNTPGG----KQGF--QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFE 282 (306)
Q Consensus 213 ~--~~~aE~~l~~sgi~~tiiRPg~l~~~~~~----~~~~--~~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~~~ 282 (306)
. .+.....+...|+++..|+||++...... .... .+........+..++|||.+++.++.... ..|+++.
T Consensus 207 ~~l~~~la~el~~~gIrvn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~pedva~~~~fL~s~~~~~itG~~i~ 286 (294)
T PRK07985 207 LNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPMKRAGQPAELAPVYVYLASQESSYVTAEVHG 286 (294)
T ss_pred HHHHHHHHHHHhHhCcEEEEEECCcCccccccccCCCHHHHHHHhccCCCCCCCCHHHHHHHHHhhhChhcCCccccEEe
Confidence 1 11122223457999999999986533210 0000 01111111235688999999999987543 3578888
Q ss_pred EecCC
Q 021854 283 VVNGE 287 (306)
Q Consensus 283 v~~g~ 287 (306)
+.+|.
T Consensus 287 vdgG~ 291 (294)
T PRK07985 287 VCGGE 291 (294)
T ss_pred eCCCe
Confidence 87663
|
|
| >KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.56 E-value=9e-14 Score=124.17 Aligned_cols=196 Identities=16% Similarity=0.118 Sum_probs=135.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh----c-CCCceeeeccCCCHHHHHHHhcCccEEEEcC-
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES----F-GTYVESMAGDASNKKFLKTALRGVRSIICPS- 171 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~----~-~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~- 171 (306)
.+++|+||||.||||++|++.|..+|+.|+++.--....+.. . ..+++.+..|+.. .++.++|.|+|.+
T Consensus 26 ~~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k~n~~~~~~~~~fel~~hdv~~-----pl~~evD~IyhLAa 100 (350)
T KOG1429|consen 26 QNLRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTGRKENLEHWIGHPNFELIRHDVVE-----PLLKEVDQIYHLAA 100 (350)
T ss_pred CCcEEEEecCcchHHHHHHHHHHhcCCeEEEEecccccchhhcchhccCcceeEEEeechh-----HHHHHhhhhhhhcc
Confidence 459999999999999999999999999999986544332211 1 1467777777765 4788899999762
Q ss_pred C----ch-----------------hhhcccccCCCEEEEecCcccccCCCCc----------ccccc-hHHHHHHHHHHH
Q 021854 172 E----GF-----------------ISNAGSLKGVQHVILLSQLSVYRGSGGI----------QALMK-GNARKLAEQDES 219 (306)
Q Consensus 172 ~----g~-----------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~----------~~~~~-~~a~~~~~~aE~ 219 (306)
+ ++ +.-+|++.+ +||++.||..+|..+..- ++..+ ..+-.-|+.+|.
T Consensus 101 pasp~~y~~npvktIktN~igtln~lglakrv~-aR~l~aSTseVYgdp~~hpq~e~ywg~vnpigpr~cydegKr~aE~ 179 (350)
T KOG1429|consen 101 PASPPHYKYNPVKTIKTNVIGTLNMLGLAKRVG-ARFLLASTSEVYGDPLVHPQVETYWGNVNPIGPRSCYDEGKRVAET 179 (350)
T ss_pred CCCCcccccCccceeeecchhhHHHHHHHHHhC-ceEEEeecccccCCcccCCCccccccccCcCCchhhhhHHHHHHHH
Confidence 2 11 223455555 799999999998631100 01111 122234556665
Q ss_pred HH----HhcCCCEEEEEcCcccCCC-----C-----------CCcce-eeecCCCCccccCHHHHHHHHHHHhhCCCCCC
Q 021854 220 ML----MASGIPYTIIRTGVLQNTP-----G-----------GKQGF-QFEEGCAANGSLSKEDAAFICVEALESIPQTG 278 (306)
Q Consensus 220 ~l----~~sgi~~tiiRPg~l~~~~-----~-----------~~~~~-~~~~g~~~~~~Is~~DVA~~iv~aL~~~~~~g 278 (306)
++ ++.|+.+.|.|+-...... + ...++ .++.|.+.+++..++|+.+.++++++++...
T Consensus 180 L~~~y~k~~giE~rIaRifNtyGPrm~~~dgrvvsnf~~q~lr~epltv~g~G~qtRSF~yvsD~Vegll~Lm~s~~~~- 258 (350)
T KOG1429|consen 180 LCYAYHKQEGIEVRIARIFNTYGPRMHMDDGRVVSNFIAQALRGEPLTVYGDGKQTRSFQYVSDLVEGLLRLMESDYRG- 258 (350)
T ss_pred HHHHhhcccCcEEEEEeeecccCCccccCCChhhHHHHHHHhcCCCeEEEcCCcceEEEEeHHHHHHHHHHHhcCCCcC-
Confidence 54 4579999999987633111 1 22333 3456667789999999999999999887654
Q ss_pred cEEEEecCC-cCHHHHHHHHHHHh
Q 021854 279 LIFEVVNGE-EKVSDWKKCFSRLM 301 (306)
Q Consensus 279 ~~~~v~~g~-~s~~d~~~l~~~l~ 301 (306)
.+|++|++ .++.+++++..++.
T Consensus 259 -pvNiGnp~e~Tm~elAemv~~~~ 281 (350)
T KOG1429|consen 259 -PVNIGNPGEFTMLELAEMVKELI 281 (350)
T ss_pred -CcccCCccceeHHHHHHHHHHHc
Confidence 39999965 58999999999887
|
|
| >PRK07041 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=1.1e-13 Score=122.04 Aligned_cols=184 Identities=15% Similarity=0.135 Sum_probs=122.0
Q ss_pred EEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh---c--CCCceeeeccCCCHHHHHHHhcC---ccEEEEcCCch
Q 021854 103 LVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---F--GTYVESMAGDASNKKFLKTALRG---VRSIICPSEGF 174 (306)
Q Consensus 103 lVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~---~--~~~v~~v~~D~~d~~~l~~~~~~---~d~vi~~~~g~ 174 (306)
+||||+|+||++++++|+++|++|+++.|+.++.... . +.+++++.+|++|.+++.++++. +|++||+++..
T Consensus 1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~id~li~~ag~~ 80 (230)
T PRK07041 1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGGGAPVRTAALDITDEAAVDAFFAEAGPFDHVVITAADT 80 (230)
T ss_pred CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHhcCCCCEEEECCCCC
Confidence 6999999999999999999999999999987654322 1 34688899999999999988864 69999984310
Q ss_pred --------------------------hhhcccccCCCEEEEecCcccccCCCCcccccchHHHHHHHHHHHHHH-hcCCC
Q 021854 175 --------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLM-ASGIP 227 (306)
Q Consensus 175 --------------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~~~~~aE~~l~-~sgi~ 227 (306)
+.++....+.++||++||..++.+..+...|..+++.... .++.+-. -.+++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~-~~~~la~e~~~ir 159 (230)
T PRK07041 81 PGGPVRALPLAAAQAAMDSKFWGAYRVARAARIAPGGSLTFVSGFAAVRPSASGVLQGAINAALEA-LARGLALELAPVR 159 (230)
T ss_pred CCCChhhCCHHHHHHHHHHHHHHHHHHHhhhhhcCCeEEEEECchhhcCCCCcchHHHHHHHHHHH-HHHHHHHHhhCce
Confidence 1112223456899999999887766665566543322111 1111111 13588
Q ss_pred EEEEEcCcccCCCC-----CC-ccee--eecCCCCccccCHHHHHHHHHHHhhCCCCCCcEEEEecCC
Q 021854 228 YTIIRTGVLQNTPG-----GK-QGFQ--FEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVVNGE 287 (306)
Q Consensus 228 ~tiiRPg~l~~~~~-----~~-~~~~--~~~g~~~~~~Is~~DVA~~iv~aL~~~~~~g~~~~v~~g~ 287 (306)
++.++||++..... .. .... ............++|+|++++.++.++...|++|++.+|.
T Consensus 160 v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~G~~~~v~gg~ 227 (230)
T PRK07041 160 VNTVSPGLVDTPLWSKLAGDAREAMFAAAAERLPARRVGQPEDVANAILFLAANGFTTGSTVLVDGGH 227 (230)
T ss_pred EEEEeecccccHHHHhhhccchHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhcCCCcCCcEEEeCCCe
Confidence 99999998643211 00 0000 0000111234568999999999998766668899988764
|
|
| >PRK08340 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=1.1e-13 Score=124.70 Aligned_cols=188 Identities=19% Similarity=0.142 Sum_probs=122.4
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh---c--CCCceeeeccCCCHHHHHHHhc-------CccEE
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---F--GTYVESMAGDASNKKFLKTALR-------GVRSI 167 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~---~--~~~v~~v~~D~~d~~~l~~~~~-------~~d~v 167 (306)
|+++||||+++||++++++|+++|++|+++.|+.++..+. . ..++.++.+|++|.++++++++ .+|++
T Consensus 1 m~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~l 80 (259)
T PRK08340 1 MNVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGIDAL 80 (259)
T ss_pred CeEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCEE
Confidence 5899999999999999999999999999999988653221 1 1257789999999988877664 57999
Q ss_pred EEcCCch------h----------------------h----hcc-cccCCCEEEEecCcccccCCCCcccccchHHHH--
Q 021854 168 ICPSEGF------I----------------------S----NAG-SLKGVQHVILLSQLSVYRGSGGIQALMKGNARK-- 212 (306)
Q Consensus 168 i~~~~g~------~----------------------~----~~a-~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~-- 212 (306)
|++++.. . . ..+ ++.+.++||++||..+..+......|..+++..
T Consensus 81 i~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sKaa~~~ 160 (259)
T PRK08340 81 VWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSVKEPMPPLVLADVTRAGLVQ 160 (259)
T ss_pred EECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCcccCCCCCCchHHHHHHHHHHH
Confidence 9884310 0 0 001 123457899999998876655555564433211
Q ss_pred HHHHHHHHHHhcCCCEEEEEcCcccCCCCCC--------ccee--------eecCCCCccccCHHHHHHHHHHHhhCCC-
Q 021854 213 LAEQDESMLMASGIPYTIIRTGVLQNTPGGK--------QGFQ--------FEEGCAANGSLSKEDAAFICVEALESIP- 275 (306)
Q Consensus 213 ~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~--------~~~~--------~~~g~~~~~~Is~~DVA~~iv~aL~~~~- 275 (306)
+.+.....+...|+++..|.||++....... .... +........+..++|||+++++++..+.
T Consensus 161 ~~~~la~e~~~~gI~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~~~fL~s~~~~ 240 (259)
T PRK08340 161 LAKGVSRTYGGKGIRAYTVLLGSFDTPGARENLARIAEERGVSFEETWEREVLERTPLKRTGRWEELGSLIAFLLSENAE 240 (259)
T ss_pred HHHHHHHHhCCCCEEEEEeccCcccCccHHHHHHhhhhccCCchHHHHHHHHhccCCccCCCCHHHHHHHHHHHcCcccc
Confidence 1122222233468999999999864332100 0000 0000111335678999999999987543
Q ss_pred -CCCcEEEEecCC
Q 021854 276 -QTGLIFEVVNGE 287 (306)
Q Consensus 276 -~~g~~~~v~~g~ 287 (306)
-.|++..+.+|.
T Consensus 241 ~itG~~i~vdgg~ 253 (259)
T PRK08340 241 YMLGSTIVFDGAM 253 (259)
T ss_pred cccCceEeecCCc
Confidence 457778777664
|
|
| >PRK07576 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=1.7e-13 Score=124.10 Aligned_cols=190 Identities=15% Similarity=0.118 Sum_probs=123.6
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh------cCCCceeeeccCCCHHHHHHHhc-------C
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------G 163 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~~~-------~ 163 (306)
.++++++||||+|+||++++++|+++|++|+++.|+.+..... .+.++.++.+|++|.++++++++ .
T Consensus 7 ~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~~~ 86 (264)
T PRK07576 7 FAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEFGP 86 (264)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 4578999999999999999999999999999999987653221 12356788999999988877765 3
Q ss_pred ccEEEEcCCch--------------------------hhhc----ccccCCCEEEEecCcccccCCCCcccccchHHHH-
Q 021854 164 VRSIICPSEGF--------------------------ISNA----GSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK- 212 (306)
Q Consensus 164 ~d~vi~~~~g~--------------------------~~~~----a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~- 212 (306)
+|++||+++.. +..+ ..+. -++||++||..+..+......|..+++..
T Consensus 87 iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~-~g~iv~iss~~~~~~~~~~~~Y~asK~a~~ 165 (264)
T PRK07576 87 IDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRP-GASIIQISAPQAFVPMPMQAHVCAAKAGVD 165 (264)
T ss_pred CCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCEEEEECChhhccCCCCccHHHHHHHHHH
Confidence 69999884311 0111 1112 26999999987765555555564433211
Q ss_pred -HHHHHHHHHHhcCCCEEEEEcCcccCCCCCCc----ce---eeecCCCCccccCHHHHHHHHHHHhhCCC--CCCcEEE
Q 021854 213 -LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQ----GF---QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFE 282 (306)
Q Consensus 213 -~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~~----~~---~~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~~~ 282 (306)
+.+.....+...+++++.|+||.+.+...... .. .+........+..++|+|++++.++..+. ..|..+.
T Consensus 166 ~l~~~la~e~~~~gi~v~~v~pg~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~ 245 (264)
T PRK07576 166 MLTRTLALEWGPEGIRVNSIVPGPIAGTEGMARLAPSPELQAAVAQSVPLKRNGTKQDIANAALFLASDMASYITGVVLP 245 (264)
T ss_pred HHHHHHHHHhhhcCeEEEEEecccccCcHHHhhcccCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcChhhcCccCCEEE
Confidence 11111222334689999999998653221000 00 00011112346788999999999997543 3577888
Q ss_pred EecCC
Q 021854 283 VVNGE 287 (306)
Q Consensus 283 v~~g~ 287 (306)
+.++.
T Consensus 246 ~~gg~ 250 (264)
T PRK07576 246 VDGGW 250 (264)
T ss_pred ECCCc
Confidence 88765
|
|
| >PRK06949 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=2.7e-13 Score=121.54 Aligned_cols=190 Identities=13% Similarity=0.063 Sum_probs=122.3
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh------cCCCceeeeccCCCHHHHHHHhc-------C
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------G 163 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~~~-------~ 163 (306)
..+++|+||||+|+||++++++|+++|++|+++.|+.++..+. .+.++.++.+|+++.++++++++ .
T Consensus 7 ~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 86 (258)
T PRK06949 7 LEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEAGT 86 (258)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Confidence 3579999999999999999999999999999999998764322 12467889999999988888765 4
Q ss_pred ccEEEEcCCch--------------------------hhh----ccccc--------CCCEEEEecCcccccCCCCcccc
Q 021854 164 VRSIICPSEGF--------------------------ISN----AGSLK--------GVQHVILLSQLSVYRGSGGIQAL 205 (306)
Q Consensus 164 ~d~vi~~~~g~--------------------------~~~----~a~~~--------gvkr~V~iSS~~~~~~~~~~~~~ 205 (306)
+|++||+++.. +.+ .+... ...++|++||..+..+......|
T Consensus 87 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y 166 (258)
T PRK06949 87 IDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRVLPQIGLY 166 (258)
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccCCCCCccHH
Confidence 79999984310 000 01111 13589999998877665555566
Q ss_pred cchHHHHHH--HHHHHHHHhcCCCEEEEEcCcccCCCCCCc---c--eeeecCCCCccccCHHHHHHHHHHHhhCCC--C
Q 021854 206 MKGNARKLA--EQDESMLMASGIPYTIIRTGVLQNTPGGKQ---G--FQFEEGCAANGSLSKEDAAFICVEALESIP--Q 276 (306)
Q Consensus 206 ~~~~a~~~~--~~aE~~l~~sgi~~tiiRPg~l~~~~~~~~---~--~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~ 276 (306)
..+++.... +.....+...++++++|+||++........ . ..+..--....+..++|+|+.++.++.... .
T Consensus 167 ~~sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~~ 246 (258)
T PRK06949 167 CMSKAAVVHMTRAMALEWGRHGINVNAICPGYIDTEINHHHWETEQGQKLVSMLPRKRVGKPEDLDGLLLLLAADESQFI 246 (258)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCcCCcchhccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHhChhhcCC
Confidence 543332111 111111234689999999999753321110 0 000000011235567999999999987543 4
Q ss_pred CCcEEEEecC
Q 021854 277 TGLIFEVVNG 286 (306)
Q Consensus 277 ~g~~~~v~~g 286 (306)
.|+...+.+|
T Consensus 247 ~G~~i~~dgg 256 (258)
T PRK06949 247 NGAIISADDG 256 (258)
T ss_pred CCcEEEeCCC
Confidence 5666666654
|
|
| >PRK06194 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=4.7e-13 Score=122.21 Aligned_cols=176 Identities=9% Similarity=0.031 Sum_probs=112.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh---c---CCCceeeeccCCCHHHHHHHhc-------Cc
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---F---GTYVESMAGDASNKKFLKTALR-------GV 164 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~---~---~~~v~~v~~D~~d~~~l~~~~~-------~~ 164 (306)
.++++|||||+|+||++++++|+++|++|+++.|+.+...+. . +.++.++.+|++|.++++++++ .+
T Consensus 5 ~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~i 84 (287)
T PRK06194 5 AGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFGAV 84 (287)
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 468999999999999999999999999999999987553221 1 2357789999999999888776 46
Q ss_pred cEEEEcCCch--------------------------h----hhcccccCC------CEEEEecCcccccCCCCcccccch
Q 021854 165 RSIICPSEGF--------------------------I----SNAGSLKGV------QHVILLSQLSVYRGSGGIQALMKG 208 (306)
Q Consensus 165 d~vi~~~~g~--------------------------~----~~~a~~~gv------kr~V~iSS~~~~~~~~~~~~~~~~ 208 (306)
|+|||+++.. + ...+.+.+. +++|++||..++.+......|..+
T Consensus 85 d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~s 164 (287)
T PRK06194 85 HLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLLAPPAMGIYNVS 164 (287)
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCCCCcchHHH
Confidence 9999984310 0 001222332 589999999887766555666544
Q ss_pred HHHHH--HHHHHHHHH--hcCCCEEEEEcCcccCCCCC---Cccee-eecCCC---------------CccccCHHHHHH
Q 021854 209 NARKL--AEQDESMLM--ASGIPYTIIRTGVLQNTPGG---KQGFQ-FEEGCA---------------ANGSLSKEDAAF 265 (306)
Q Consensus 209 ~a~~~--~~~aE~~l~--~sgi~~tiiRPg~l~~~~~~---~~~~~-~~~g~~---------------~~~~Is~~DVA~ 265 (306)
++... .+.....+. ..++++..+.||++...... ..+.. ...+.. ....++++|+|+
T Consensus 165 K~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~dva~ 244 (287)
T PRK06194 165 KHAVVSLTETLYQDLSLVTDQVGASVLCPYFVPTGIWQSERNRPADLANTAPPTRSQLIAQAMSQKAVGSGKVTAEEVAQ 244 (287)
T ss_pred HHHHHHHHHHHHHHHhhcCCCeEEEEEEeCcccCccccccccCchhcccCccccchhhHHHHHHHhhhhccCCCHHHHHH
Confidence 33211 111111111 24578889999986422210 11111 111110 113479999999
Q ss_pred HHHHHhhC
Q 021854 266 ICVEALES 273 (306)
Q Consensus 266 ~iv~aL~~ 273 (306)
.++.++..
T Consensus 245 ~i~~~~~~ 252 (287)
T PRK06194 245 LVFDAIRA 252 (287)
T ss_pred HHHHHHHc
Confidence 99998853
|
|
| >PRK06196 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=1.1e-13 Score=128.66 Aligned_cols=179 Identities=15% Similarity=0.066 Sum_probs=113.1
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcC--CCceeeeccCCCHHHHHHHhc-------CccEE
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG--TYVESMAGDASNKKFLKTALR-------GVRSI 167 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~--~~v~~v~~D~~d~~~l~~~~~-------~~d~v 167 (306)
..+++|+||||+|+||++++++|+++|++|+++.|+.++..+... ..+.++.+|++|.++++++++ ++|++
T Consensus 24 l~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~l 103 (315)
T PRK06196 24 LSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGIDGVEVVMLDLADLESVRAFAERFLDSGRRIDIL 103 (315)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhCeEEEccCCCHHHHHHHHHHHHhcCCCCCEE
Confidence 356899999999999999999999999999999999876443221 247889999999988877663 57999
Q ss_pred EEcCCch----------------------------hhhcccccCCCEEEEecCcccccCC------------CCcccccc
Q 021854 168 ICPSEGF----------------------------ISNAGSLKGVQHVILLSQLSVYRGS------------GGIQALMK 207 (306)
Q Consensus 168 i~~~~g~----------------------------~~~~a~~~gvkr~V~iSS~~~~~~~------------~~~~~~~~ 207 (306)
||+++-. +...+.+.+..++|++||....... .+...|..
T Consensus 104 i~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~~~~~~~~Y~~ 183 (315)
T PRK06196 104 INNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAGAGARVVALSSAGHRRSPIRWDDPHFTRGYDKWLAYGQ 183 (315)
T ss_pred EECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEECCHHhccCCCCccccCccCCCChHHHHHH
Confidence 9984310 1122334556799999997543211 11122332
Q ss_pred hHHHHH--HHHHHHHHHhcCCCEEEEEcCcccCCCCCCcc----e---eeecCCCCc--cccCHHHHHHHHHHHhhCCC
Q 021854 208 GNARKL--AEQDESMLMASGIPYTIIRTGVLQNTPGGKQG----F---QFEEGCAAN--GSLSKEDAAFICVEALESIP 275 (306)
Q Consensus 208 ~~a~~~--~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~~~----~---~~~~g~~~~--~~Is~~DVA~~iv~aL~~~~ 275 (306)
+++... .+.....+...++++++|+||++......... . .+....... ...+++|+|..++.++..+.
T Consensus 184 SK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~ 262 (315)
T PRK06196 184 SKTANALFAVHLDKLGKDQGVRAFSVHPGGILTPLQRHLPREEQVALGWVDEHGNPIDPGFKTPAQGAATQVWAATSPQ 262 (315)
T ss_pred HHHHHHHHHHHHHHHhcCCCcEEEEeeCCcccCCccccCChhhhhhhhhhhhhhhhhhhhcCCHhHHHHHHHHHhcCCc
Confidence 222111 11112223346899999999997533211100 0 000000000 24578999999999997654
|
|
| >PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=2.6e-13 Score=121.98 Aligned_cols=189 Identities=18% Similarity=0.061 Sum_probs=119.8
Q ss_pred CCCeEEEEcCCC--hHHHHHHHHHHHCCCeEEEEecCcc-----------h---hhh---hcCCCceeeeccCCCHHHHH
Q 021854 98 ARDAVLVTDGDS--DIGQMVILSLIVKRTRIKALVKDKR-----------N---AME---SFGTYVESMAGDASNKKFLK 158 (306)
Q Consensus 98 ~~~~ilVtGatG--~iG~~l~~~L~~~g~~V~~l~R~~~-----------~---~~~---~~~~~v~~v~~D~~d~~~l~ 158 (306)
++++|+||||+| +||.+++++|+++|++|+++.|++. . ... ..+.++.++.+|++|.++++
T Consensus 4 ~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~ 83 (256)
T PRK12748 4 MKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQPYAPN 83 (256)
T ss_pred CCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCCHHHHH
Confidence 568999999995 7999999999999999999998721 1 111 12346889999999988876
Q ss_pred HHhc-------CccEEEEcCCch--------------------------hhhcc----cccCCCEEEEecCcccccCCCC
Q 021854 159 TALR-------GVRSIICPSEGF--------------------------ISNAG----SLKGVQHVILLSQLSVYRGSGG 201 (306)
Q Consensus 159 ~~~~-------~~d~vi~~~~g~--------------------------~~~~a----~~~gvkr~V~iSS~~~~~~~~~ 201 (306)
.+++ .+|+|||+++.. +..++ ...+.++||++||..++.+..+
T Consensus 84 ~~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~ 163 (256)
T PRK12748 84 RVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTSGQSLGPMPD 163 (256)
T ss_pred HHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCeEEEEECCccccCCCCC
Confidence 6554 469999984310 11111 2234569999999887765555
Q ss_pred cccccchHHHHHH--HHHHHHHHhcCCCEEEEEcCcccCCCCCCcc-eeeecCCCCccccCHHHHHHHHHHHhhCCC--C
Q 021854 202 IQALMKGNARKLA--EQDESMLMASGIPYTIIRTGVLQNTPGGKQG-FQFEEGCAANGSLSKEDAAFICVEALESIP--Q 276 (306)
Q Consensus 202 ~~~~~~~~a~~~~--~~aE~~l~~sgi~~tiiRPg~l~~~~~~~~~-~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~ 276 (306)
...|..+++.... +.....+...+++++.|+||.+......... ..+........+..++|+|+.+..++.... .
T Consensus 164 ~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~ 243 (256)
T PRK12748 164 ELAYAATKGAIEAFTKSLAPELAEKGITVNAVNPGPTDTGWITEELKHHLVPKFPQGRVGEPVDAARLIAFLVSEEAKWI 243 (256)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEeCcccCCCCChhHHHhhhccCCCCCCcCHHHHHHHHHHHhCcccccc
Confidence 5556544332211 1111123346899999999986433211100 000001111234578999999998886543 3
Q ss_pred CCcEEEEecC
Q 021854 277 TGLIFEVVNG 286 (306)
Q Consensus 277 ~g~~~~v~~g 286 (306)
.|+++++.++
T Consensus 244 ~g~~~~~d~g 253 (256)
T PRK12748 244 TGQVIHSEGG 253 (256)
T ss_pred cCCEEEecCC
Confidence 4788888765
|
|
| >PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.55 E-value=3.1e-13 Score=121.38 Aligned_cols=191 Identities=12% Similarity=0.086 Sum_probs=126.3
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhh------hcCCCceeeeccCCCHHHHHHHhc-------C
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTALR-------G 163 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~------~~~~~v~~v~~D~~d~~~l~~~~~-------~ 163 (306)
..+++|+||||+|+||++++++|+++|++|++++|+.+.... ..+.++.++.+|++|.+++.++++ .
T Consensus 9 l~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~ 88 (255)
T PRK06113 9 LDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSKLGK 88 (255)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 457999999999999999999999999999999998765321 123467788999999988877654 4
Q ss_pred ccEEEEcCCch-------------------------hhhc----ccccCCCEEEEecCcccccCCCCcccccchHHHH--
Q 021854 164 VRSIICPSEGF-------------------------ISNA----GSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK-- 212 (306)
Q Consensus 164 ~d~vi~~~~g~-------------------------~~~~----a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~-- 212 (306)
+|++||+++.. +..+ ..+.+..++|++||..+..+..+...|..+++..
T Consensus 89 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~ 168 (255)
T PRK06113 89 VDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASH 168 (255)
T ss_pred CCEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEecccccCCCCCcchhHHHHHHHHH
Confidence 69999984310 1111 1234456999999988876666666665543321
Q ss_pred HHHHHHHHHHhcCCCEEEEEcCcccCCCCCCc--cee---eecCCCCccccCHHHHHHHHHHHhhCCC--CCCcEEEEec
Q 021854 213 LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQ--GFQ---FEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVN 285 (306)
Q Consensus 213 ~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~~--~~~---~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~~~v~~ 285 (306)
+.+.....+...+|++++|.||++........ ... .........+.+++|+|+++..++.... ..|+++.+.+
T Consensus 169 ~~~~la~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~~~G~~i~~~g 248 (255)
T PRK06113 169 LVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTPIRRLGQPQDIANAALFLCSPAASWVSGQILTVSG 248 (255)
T ss_pred HHHHHHHHhhhhCeEEEEEecccccccccccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCccCCEEEECC
Confidence 11112222334689999999998753321110 000 0011111235688999999999987543 3578899887
Q ss_pred CC
Q 021854 286 GE 287 (306)
Q Consensus 286 g~ 287 (306)
|.
T Consensus 249 g~ 250 (255)
T PRK06113 249 GG 250 (255)
T ss_pred Cc
Confidence 64
|
|
| >PRK06924 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=7.2e-14 Score=124.92 Aligned_cols=185 Identities=17% Similarity=0.137 Sum_probs=117.3
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcch-hh---hhcCCCceeeeccCCCHHHHHHHhcCc---------c-
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-AM---ESFGTYVESMAGDASNKKFLKTALRGV---------R- 165 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~-~~---~~~~~~v~~v~~D~~d~~~l~~~~~~~---------d- 165 (306)
|+|+||||+|+||++++++|+++|++|+++.|+..+ .. +..+.+++++.+|++|.++++++++.+ +
T Consensus 2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (251)
T PRK06924 2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLAEQYNSNLTFHSLDLQDVHELETNFNEILSSIQEDNVSS 81 (251)
T ss_pred cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHHHhccCCceEEEEecCCCHHHHHHHHHHHHHhcCcccCCc
Confidence 689999999999999999999999999999998732 22 122346889999999999888877543 1
Q ss_pred -EEEEcCCch-------------------------------hhhcccc-cCCCEEEEecCcccccCCCCcccccchHHHH
Q 021854 166 -SIICPSEGF-------------------------------ISNAGSL-KGVQHVILLSQLSVYRGSGGIQALMKGNARK 212 (306)
Q Consensus 166 -~vi~~~~g~-------------------------------~~~~a~~-~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~ 212 (306)
++|++++.. +...+.+ .+.++||++||..+..+......|..+++..
T Consensus 82 ~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sKaa~ 161 (251)
T PRK06924 82 IHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAAKNPYFGWSAYCSSKAGL 161 (251)
T ss_pred eEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhhcCCCCCcHHHhHHHHHH
Confidence 455543210 0111222 2356899999988777666666676544322
Q ss_pred HH--H--HHHHHHHhcCCCEEEEEcCcccCCCCC------Cccee----eecCCCCccccCHHHHHHHHHHHhhCC-CCC
Q 021854 213 LA--E--QDESMLMASGIPYTIIRTGVLQNTPGG------KQGFQ----FEEGCAANGSLSKEDAAFICVEALESI-PQT 277 (306)
Q Consensus 213 ~~--~--~aE~~l~~sgi~~tiiRPg~l~~~~~~------~~~~~----~~~g~~~~~~Is~~DVA~~iv~aL~~~-~~~ 277 (306)
.. + ..|...+..++++..|+||++...... ..... +........+.+++|+|+.++.++.++ ...
T Consensus 162 ~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~ 241 (251)
T PRK06924 162 DMFTQTVATEQEEEEYPVKIVAFSPGVMDTNMQAQIRSSSKEDFTNLDRFITLKEEGKLLSPEYVAKALRNLLETEDFPN 241 (251)
T ss_pred HHHHHHHHHHhhhcCCCeEEEEecCCccccHhHHHHHhcCcccchHHHHHHHHhhcCCcCCHHHHHHHHHHHHhcccCCC
Confidence 11 1 111112235799999999986532210 00000 000001124689999999999999873 344
Q ss_pred CcEEEEe
Q 021854 278 GLIFEVV 284 (306)
Q Consensus 278 g~~~~v~ 284 (306)
|+.+.+.
T Consensus 242 G~~~~v~ 248 (251)
T PRK06924 242 GEVIDID 248 (251)
T ss_pred CCEeehh
Confidence 6666543
|
|
| >PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.54 E-value=3.6e-13 Score=121.03 Aligned_cols=190 Identities=14% Similarity=0.111 Sum_probs=123.6
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcch--hhh--hcCCCceeeeccCCCHHHHHHHhc-------Ccc
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN--AME--SFGTYVESMAGDASNKKFLKTALR-------GVR 165 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~--~~~--~~~~~v~~v~~D~~d~~~l~~~~~-------~~d 165 (306)
..+++++||||+|+||++++++|++.|++|+++.|.... ... ..+..+..+.+|++|.++++++++ .+|
T Consensus 8 l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~D 87 (253)
T PRK08993 8 LEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEPTETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAEFGHID 87 (253)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcchHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence 457999999999999999999999999999988765422 111 123457788999999988887765 479
Q ss_pred EEEEcCCch--------------------------hhhc----ccccC-CCEEEEecCcccccCCCCcccccchHHHH--
Q 021854 166 SIICPSEGF--------------------------ISNA----GSLKG-VQHVILLSQLSVYRGSGGIQALMKGNARK-- 212 (306)
Q Consensus 166 ~vi~~~~g~--------------------------~~~~----a~~~g-vkr~V~iSS~~~~~~~~~~~~~~~~~a~~-- 212 (306)
++||+++.. +.++ ..+.+ -.++|++||..++.+......|..+++..
T Consensus 88 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaa~~~ 167 (253)
T PRK08993 88 ILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGIRVPSYTASKSGVMG 167 (253)
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhccCCCCCcchHHHHHHHHH
Confidence 999984310 1111 11222 35899999998877666556676544322
Q ss_pred HHHHHHHHHHhcCCCEEEEEcCcccCCCCCC----cce--eeecCCCCccccCHHHHHHHHHHHhhCCC--CCCcEEEEe
Q 021854 213 LAEQDESMLMASGIPYTIIRTGVLQNTPGGK----QGF--QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVV 284 (306)
Q Consensus 213 ~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~----~~~--~~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~~~v~ 284 (306)
+.+.....+...+++++.|+||++....... ... .+........+..++|+|..++.++.+.. ..|+++.+.
T Consensus 168 ~~~~la~e~~~~gi~v~~v~pG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~eva~~~~~l~s~~~~~~~G~~~~~d 247 (253)
T PRK08993 168 VTRLMANEWAKHNINVNAIAPGYMATNNTQQLRADEQRSAEILDRIPAGRWGLPSDLMGPVVFLASSASDYINGYTIAVD 247 (253)
T ss_pred HHHHHHHHhhhhCeEEEEEeeCcccCcchhhhccchHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccCcEEEEC
Confidence 1122222234578999999999975332110 000 00011112346788999999999997643 357777776
Q ss_pred cC
Q 021854 285 NG 286 (306)
Q Consensus 285 ~g 286 (306)
+|
T Consensus 248 gg 249 (253)
T PRK08993 248 GG 249 (253)
T ss_pred CC
Confidence 54
|
|
| >PRK07023 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=1.1e-13 Score=123.32 Aligned_cols=172 Identities=15% Similarity=0.122 Sum_probs=113.7
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhh-hhcCCCceeeeccCCCHHHHHHHhc-----------CccEE
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM-ESFGTYVESMAGDASNKKFLKTALR-----------GVRSI 167 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~-~~~~~~v~~v~~D~~d~~~l~~~~~-----------~~d~v 167 (306)
++++||||+|+||++++++|+++|++|++++|+.++.. ...+.++.++.+|+.|.+++++++. ..|++
T Consensus 2 ~~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (243)
T PRK07023 2 VRAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPSLAAAAGERLAEVELDLSDAAAAAAWLAGDLLAAFVDGASRVLL 81 (243)
T ss_pred ceEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchhhhhccCCeEEEEEeccCCHHHHHHHHHHHHHHHhccCCCceEE
Confidence 58999999999999999999999999999999876422 2234468889999999988877442 35788
Q ss_pred EEcCCc-----h--------------------------hhhcccccCCCEEEEecCcccccCCCCcccccchHHHHHHHH
Q 021854 168 ICPSEG-----F--------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQ 216 (306)
Q Consensus 168 i~~~~g-----~--------------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~~~~~ 216 (306)
||+++. . +...+.+.+.++||++||..++.+..+...|..+++ .
T Consensus 82 v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~-----a 156 (243)
T PRK07023 82 INNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAERRILHISSGAARNAYAGWSVYCATKA-----A 156 (243)
T ss_pred EEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCCEEEEEeChhhcCCCCCchHHHHHHH-----H
Confidence 887321 0 111223355679999999988776666656654332 2
Q ss_pred HHHHHH------hcCCCEEEEEcCcccCCCC-----CC-ccee----eecCCCCccccCHHHHHHHHHHHhhCCCC
Q 021854 217 DESMLM------ASGIPYTIIRTGVLQNTPG-----GK-QGFQ----FEEGCAANGSLSKEDAAFICVEALESIPQ 276 (306)
Q Consensus 217 aE~~l~------~sgi~~tiiRPg~l~~~~~-----~~-~~~~----~~~g~~~~~~Is~~DVA~~iv~aL~~~~~ 276 (306)
.|.+++ ..+++++.|+||++..... .. .... +..-......+.++|+|..++..|..+..
T Consensus 157 ~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~~l~~~~~ 232 (243)
T PRK07023 157 LDHHARAVALDANRALRIVSLAPGVVDTGMQATIRATDEERFPMRERFRELKASGALSTPEDAARRLIAYLLSDDF 232 (243)
T ss_pred HHHHHHHHHhcCCCCcEEEEecCCccccHHHHHHHhcccccchHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcccc
Confidence 222222 3589999999998643210 00 0000 00000113467899999988777776643
|
|
| >PRK06057 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=2.6e-13 Score=121.88 Aligned_cols=190 Identities=12% Similarity=0.024 Sum_probs=120.3
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcC-CCceeeeccCCCHHHHHHHhc-------CccEEE
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG-TYVESMAGDASNKKFLKTALR-------GVRSII 168 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~-~~v~~v~~D~~d~~~l~~~~~-------~~d~vi 168 (306)
..+++|+||||+|+||.+++++|+++|++|+++.|+..+...... ....++.+|++|.++++++++ .+|++|
T Consensus 5 ~~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi 84 (255)
T PRK06057 5 LAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVGGLFVPTDVTDEDAVNALFDTAAETYGSVDIAF 84 (255)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCcEEEeeCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 357999999999999999999999999999999998765432211 123678999999988887775 469999
Q ss_pred EcCCch--------------------------------hhhcccccCCCEEEEecCcccccCC-CCcccccchHHHH--H
Q 021854 169 CPSEGF--------------------------------ISNAGSLKGVQHVILLSQLSVYRGS-GGIQALMKGNARK--L 213 (306)
Q Consensus 169 ~~~~g~--------------------------------~~~~a~~~gvkr~V~iSS~~~~~~~-~~~~~~~~~~a~~--~ 213 (306)
|+++.. +.....+.+..++|++||..+..+. .+...|..+++.. +
T Consensus 85 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~~sS~~~~~g~~~~~~~Y~~sKaal~~~ 164 (255)
T PRK06057 85 NNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQGKGSIINTASFVAVMGSATSQISYTASKGGVLAM 164 (255)
T ss_pred ECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhCCcEEEEEcchhhccCCCCCCcchHHHHHHHHHH
Confidence 984310 0111223456689999986544332 3444554433321 1
Q ss_pred HHHHHHHHHhcCCCEEEEEcCcccCCCCCC----cceeee---cCCCCccccCHHHHHHHHHHHhhCCC--CCCcEEEEe
Q 021854 214 AEQDESMLMASGIPYTIIRTGVLQNTPGGK----QGFQFE---EGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVV 284 (306)
Q Consensus 214 ~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~----~~~~~~---~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~~~v~ 284 (306)
.+.....+...++++++|+||++....... ...... .......+.+++|+|+++..++.+.. ..+..+.+.
T Consensus 165 ~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~~ 244 (255)
T PRK06057 165 SRELGVQFARQGIRVNALCPGPVNTPLLQELFAKDPERAARRLVHVPMGRFAEPEEIAAAVAFLASDDASFITASTFLVD 244 (255)
T ss_pred HHHHHHHHHhhCcEEEEEeeCCcCCchhhhhccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccCcEEEEC
Confidence 122222233468999999999875322110 000000 00011246788999999988886543 346777776
Q ss_pred cC
Q 021854 285 NG 286 (306)
Q Consensus 285 ~g 286 (306)
++
T Consensus 245 ~g 246 (255)
T PRK06057 245 GG 246 (255)
T ss_pred CC
Confidence 55
|
|
| >PRK12742 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=3.7e-13 Score=119.12 Aligned_cols=189 Identities=13% Similarity=0.135 Sum_probs=118.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCc-chhhhhcC-CCceeeeccCCCHHHHHHHhc---CccEEEEcCC
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK-RNAMESFG-TYVESMAGDASNKKFLKTALR---GVRSIICPSE 172 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~-~~~~~~~~-~~v~~v~~D~~d~~~l~~~~~---~~d~vi~~~~ 172 (306)
++++|+||||+|+||++++++|+++|++|+++.|.. +..++... .++.++.+|++|.+++.++++ .+|++||+++
T Consensus 5 ~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~li~~ag 84 (237)
T PRK12742 5 TGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQETGATAVQTDSADRDAVIDVVRKSGALDILVVNAG 84 (237)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHhCCeEEecCCCCHHHHHHHHHHhCCCcEEEECCC
Confidence 478999999999999999999999999998876643 33222111 246788899999888877665 4799999843
Q ss_pred ch----h-----------------------hhcccc-cCCCEEEEecCcccc-cCCCCcccccchHHHHH--HHHHHHHH
Q 021854 173 GF----I-----------------------SNAGSL-KGVQHVILLSQLSVY-RGSGGIQALMKGNARKL--AEQDESML 221 (306)
Q Consensus 173 g~----~-----------------------~~~a~~-~gvkr~V~iSS~~~~-~~~~~~~~~~~~~a~~~--~~~aE~~l 221 (306)
.. . ..++.. .+.+++|++||..+. .+..+...|..+++... .+.....+
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~~~ 164 (237)
T PRK12742 85 IAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVNGDRMPVAGMAAYAASKSALQGMARGLARDF 164 (237)
T ss_pred CCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEeccccccCCCCCCcchHHhHHHHHHHHHHHHHHH
Confidence 11 0 011111 234689999998763 34445556654433211 11111223
Q ss_pred HhcCCCEEEEEcCcccCCCCCCccee---eecCCCCccccCHHHHHHHHHHHhhCCC--CCCcEEEEecC
Q 021854 222 MASGIPYTIIRTGVLQNTPGGKQGFQ---FEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVNG 286 (306)
Q Consensus 222 ~~sgi~~tiiRPg~l~~~~~~~~~~~---~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~~~v~~g 286 (306)
...++++++|+||.+........... .........+.+++|+|.++..++.+.. ..|..+.+.+|
T Consensus 165 ~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~l~s~~~~~~~G~~~~~dgg 234 (237)
T PRK12742 165 GPRGITINVVQPGPIDTDANPANGPMKDMMHSFMAIKRHGRPEEVAGMVAWLAGPEASFVTGAMHTIDGA 234 (237)
T ss_pred hhhCeEEEEEecCcccCCccccccHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCcccCcccCCEEEeCCC
Confidence 34689999999998753321111000 0001112345789999999999887543 35777777655
|
|
| >PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=5.5e-13 Score=118.82 Aligned_cols=189 Identities=16% Similarity=0.183 Sum_probs=122.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh------cCCCceeeeccCCCHHHHHHHhc-------Cc
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GV 164 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~~~-------~~ 164 (306)
.+++++||||+|+||+.+++.|+++|++|+++.|+.++..+. .+.++.++.+|++|.++++++++ .+
T Consensus 4 ~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 83 (253)
T PRK08217 4 KDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQL 83 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 478999999999999999999999999999999988653221 23467789999999888766554 36
Q ss_pred cEEEEcCCch------------h-h--------------------------hcc-cccCCCEEEEecCcccccCCCCccc
Q 021854 165 RSIICPSEGF------------I-S--------------------------NAG-SLKGVQHVILLSQLSVYRGSGGIQA 204 (306)
Q Consensus 165 d~vi~~~~g~------------~-~--------------------------~~a-~~~gvkr~V~iSS~~~~~~~~~~~~ 204 (306)
|+|||+++.. . . ... +...-.++|++||...+ +..+...
T Consensus 84 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~~~~-~~~~~~~ 162 (253)
T PRK08217 84 NGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIARA-GNMGQTN 162 (253)
T ss_pred CEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEcccccc-CCCCCch
Confidence 9999984310 0 0 001 11233578999987654 3334455
Q ss_pred ccchHHHH--HHHHHHHHHHhcCCCEEEEEcCcccCCCCCCc-ce---eeecCCCCccccCHHHHHHHHHHHhhCCCCCC
Q 021854 205 LMKGNARK--LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQ-GF---QFEEGCAANGSLSKEDAAFICVEALESIPQTG 278 (306)
Q Consensus 205 ~~~~~a~~--~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~~-~~---~~~~g~~~~~~Is~~DVA~~iv~aL~~~~~~g 278 (306)
|..+++.. +.+.....+...+++++.++||++........ +. .+........+.+++|+|+++..++......|
T Consensus 163 Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~g 242 (253)
T PRK08217 163 YSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEMTAAMKPEALERLEKMIPVGRLGEPEEIAHTVRFIIENDYVTG 242 (253)
T ss_pred hHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccCHHHHHHHHhcCCcCCCcCHHHHHHHHHHHHcCCCcCC
Confidence 65443321 11111222345789999999999753322110 00 00111122345688999999999997655578
Q ss_pred cEEEEecCC
Q 021854 279 LIFEVVNGE 287 (306)
Q Consensus 279 ~~~~v~~g~ 287 (306)
++|++.++-
T Consensus 243 ~~~~~~gg~ 251 (253)
T PRK08217 243 RVLEIDGGL 251 (253)
T ss_pred cEEEeCCCc
Confidence 899988753
|
|
| >TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=99.54 E-value=3.8e-13 Score=147.21 Aligned_cols=201 Identities=15% Similarity=0.149 Sum_probs=137.4
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCC----CeEEEEecCcchhhh----------------hcCCCceeeeccCCC-----
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKR----TRIKALVKDKRNAME----------------SFGTYVESMAGDASN----- 153 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g----~~V~~l~R~~~~~~~----------------~~~~~v~~v~~D~~d----- 153 (306)
.++|+||||||++|++++++|++.+ ++|++++|....... ....+++++.+|+.+
T Consensus 971 ~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lgl 1050 (1389)
T TIGR03443 971 PITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFGL 1050 (1389)
T ss_pred CceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCCc
Confidence 5899999999999999999999887 899999998643110 012368899999974
Q ss_pred -HHHHHHHhcCccEEEEcCCch-------------------hhhcccccCCCEEEEecCcccccCCC-------------
Q 021854 154 -KKFLKTALRGVRSIICPSEGF-------------------ISNAGSLKGVQHVILLSQLSVYRGSG------------- 200 (306)
Q Consensus 154 -~~~l~~~~~~~d~vi~~~~g~-------------------~~~~a~~~gvkr~V~iSS~~~~~~~~------------- 200 (306)
.+.+..+..++|+|||+++.. +.+++.+.++++|+|+||.+++....
T Consensus 1051 ~~~~~~~l~~~~d~iiH~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~vSS~~v~~~~~~~~~~~~~~~~~~ 1130 (1389)
T TIGR03443 1051 SDEKWSDLTNEVDVIIHNGALVHWVYPYSKLRDANVIGTINVLNLCAEGKAKQFSFVSSTSALDTEYYVNLSDELVQAGG 1130 (1389)
T ss_pred CHHHHHHHHhcCCEEEECCcEecCccCHHHHHHhHHHHHHHHHHHHHhCCCceEEEEeCeeecCcccccchhhhhhhccC
Confidence 466777888999999983310 34556778899999999987763200
Q ss_pred -Cc------cc---ccchHHHHHHHHHHHHHHh---cCCCEEEEEcCcccCCCCCCcc----------------eeeecC
Q 021854 201 -GI------QA---LMKGNARKLAEQDESMLMA---SGIPYTIIRTGVLQNTPGGKQG----------------FQFEEG 251 (306)
Q Consensus 201 -~~------~~---~~~~~a~~~~~~aE~~l~~---sgi~~tiiRPg~l~~~~~~~~~----------------~~~~~g 251 (306)
+. .. .....+...|..+|.++.. .+++++++|||.+......+.. -.++.+
T Consensus 1131 ~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~~~g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~p~~ 1210 (1389)
T TIGR03443 1131 AGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREAGKRGLRGCIVRPGYVTGDSKTGATNTDDFLLRMLKGCIQLGLIPNI 1210 (1389)
T ss_pred CCCCcccccccccccCCCChHHHHHHHHHHHHHHHhCCCCEEEECCCccccCCCcCCCCchhHHHHHHHHHHHhCCcCCC
Confidence 00 00 0001234456667777653 5899999999996533211100 011233
Q ss_pred CCCccccCHHHHHHHHHHHhhCCC--CCCcEEEEecCC-cCHHHHHHHHHH
Q 021854 252 CAANGSLSKEDAAFICVEALESIP--QTGLIFEVVNGE-EKVSDWKKCFSR 299 (306)
Q Consensus 252 ~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~~~v~~g~-~s~~d~~~l~~~ 299 (306)
.....+++++|||++++.++..+. ..+.+||+.++. .++.++.+.+.+
T Consensus 1211 ~~~~~~~~Vddva~ai~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~ 1261 (1389)
T TIGR03443 1211 NNTVNMVPVDHVARVVVAAALNPPKESELAVAHVTGHPRIRFNDFLGTLKT 1261 (1389)
T ss_pred CCccccccHHHHHHHHHHHHhCCcccCCCCEEEeCCCCCCcHHHHHHHHHH
Confidence 344678999999999999987654 234689998875 467777766654
|
Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal. |
| >PRK06123 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.53 E-value=7.2e-13 Score=118.10 Aligned_cols=189 Identities=15% Similarity=0.148 Sum_probs=116.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCc-chhhh------hcCCCceeeeccCCCHHHHHHHhc-------C
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK-RNAME------SFGTYVESMAGDASNKKFLKTALR-------G 163 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~-~~~~~------~~~~~v~~v~~D~~d~~~l~~~~~-------~ 163 (306)
|+++++||||+|+||++++++|+++|++|+++.++. ++..+ ..+.++.++.+|++|.+++.++++ .
T Consensus 1 ~~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 80 (248)
T PRK06123 1 MRKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRELGR 80 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHhCC
Confidence 357899999999999999999999999988776433 32211 123457789999999988887775 5
Q ss_pred ccEEEEcCCch---------------------------hhhccc----cc--C-CCEEEEecCcccccCCCC-cccccch
Q 021854 164 VRSIICPSEGF---------------------------ISNAGS----LK--G-VQHVILLSQLSVYRGSGG-IQALMKG 208 (306)
Q Consensus 164 ~d~vi~~~~g~---------------------------~~~~a~----~~--g-vkr~V~iSS~~~~~~~~~-~~~~~~~ 208 (306)
+|++||+++.. +.+.+. +. + -+++|++||..+..+... ...|..+
T Consensus 81 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~Y~~s 160 (248)
T PRK06123 81 LDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLGSPGEYIDYAAS 160 (248)
T ss_pred CCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcCCCCCCccchHHH
Confidence 69999983310 011111 11 1 247999999876554433 2346544
Q ss_pred HHHHHH--HHHHHHHHhcCCCEEEEEcCcccCCCCCC--ccee---eecCCCCccccCHHHHHHHHHHHhhCCC--CCCc
Q 021854 209 NARKLA--EQDESMLMASGIPYTIIRTGVLQNTPGGK--QGFQ---FEEGCAANGSLSKEDAAFICVEALESIP--QTGL 279 (306)
Q Consensus 209 ~a~~~~--~~aE~~l~~sgi~~tiiRPg~l~~~~~~~--~~~~---~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~ 279 (306)
++.... +.....+...++++++||||++....... .... +.......-..+++|+|++++.++.... ..|+
T Consensus 161 Kaa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~d~a~~~~~l~~~~~~~~~g~ 240 (248)
T PRK06123 161 KGAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEIHASGGEPGRVDRVKAGIPMGRGGTAEEVARAILWLLSDEASYTTGT 240 (248)
T ss_pred HHHHHHHHHHHHHHhcccCeEEEEEecCcccCchhhccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccCC
Confidence 332111 11111233468999999999865332110 0000 0000111122478999999999887543 4578
Q ss_pred EEEEecC
Q 021854 280 IFEVVNG 286 (306)
Q Consensus 280 ~~~v~~g 286 (306)
.|++.++
T Consensus 241 ~~~~~gg 247 (248)
T PRK06123 241 FIDVSGG 247 (248)
T ss_pred EEeecCC
Confidence 9998765
|
|
| >PRK07832 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.53 E-value=5e-13 Score=121.32 Aligned_cols=175 Identities=16% Similarity=0.099 Sum_probs=112.1
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh------cCC-CceeeeccCCCHHHHHHHhc-------Ccc
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGT-YVESMAGDASNKKFLKTALR-------GVR 165 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~------~~~-~v~~v~~D~~d~~~l~~~~~-------~~d 165 (306)
++++||||+|+||++++++|+++|++|+++.|+.++..+. .+. .+.++.+|++|.+++.++++ .+|
T Consensus 1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 80 (272)
T PRK07832 1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSMD 80 (272)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence 5799999999999999999999999999999987653221 122 34557899999888766554 469
Q ss_pred EEEEcCCch--------------------------hhhc----ccc-cCCCEEEEecCcccccCCCCcccccchHHH--H
Q 021854 166 SIICPSEGF--------------------------ISNA----GSL-KGVQHVILLSQLSVYRGSGGIQALMKGNAR--K 212 (306)
Q Consensus 166 ~vi~~~~g~--------------------------~~~~----a~~-~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~--~ 212 (306)
++||+++.. +.++ +.. ...++||++||..+..+......|..+++. .
T Consensus 81 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~a~~~ 160 (272)
T PRK07832 81 VVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGLVALPWHAAYSASKFGLRG 160 (272)
T ss_pred EEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccccCCCCCCcchHHHHHHHHH
Confidence 999984310 1111 111 234699999998776555555556544321 1
Q ss_pred HHHHHHHHHHhcCCCEEEEEcCcccCCCCCC-c--ceeee-------cCCCCccccCHHHHHHHHHHHhhCC
Q 021854 213 LAEQDESMLMASGIPYTIIRTGVLQNTPGGK-Q--GFQFE-------EGCAANGSLSKEDAAFICVEALESI 274 (306)
Q Consensus 213 ~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~-~--~~~~~-------~g~~~~~~Is~~DVA~~iv~aL~~~ 274 (306)
+.+.....+...++++++|+||.+....... . +.... ........++++|+|+.++.++..+
T Consensus 161 ~~~~l~~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vA~~~~~~~~~~ 232 (272)
T PRK07832 161 LSEVLRFDLARHGIGVSVVVPGAVKTPLVNTVEIAGVDREDPRVQKWVDRFRGHAVTPEKAAEKILAGVEKN 232 (272)
T ss_pred HHHHHHHHhhhcCcEEEEEecCcccCcchhcccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHhcC
Confidence 2222222334578999999999865321110 0 00000 0011234689999999999999644
|
|
| >PRK08936 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.53 E-value=1.1e-12 Score=118.15 Aligned_cols=191 Identities=13% Similarity=0.073 Sum_probs=124.0
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcch-hh---h---hcCCCceeeeccCCCHHHHHHHhc-------
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-AM---E---SFGTYVESMAGDASNKKFLKTALR------- 162 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~-~~---~---~~~~~v~~v~~D~~d~~~l~~~~~------- 162 (306)
.++++++||||+|+||++++++|+++|++|+++.|+... .. + ..+.++.++.+|++|.+++.++++
T Consensus 5 ~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g 84 (261)
T PRK08936 5 LEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKEFG 84 (261)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 357999999999999999999999999999998885432 11 1 123457788999999988777664
Q ss_pred CccEEEEcCCch------------------------------hhhcccccC-CCEEEEecCcccccCCCCcccccchHHH
Q 021854 163 GVRSIICPSEGF------------------------------ISNAGSLKG-VQHVILLSQLSVYRGSGGIQALMKGNAR 211 (306)
Q Consensus 163 ~~d~vi~~~~g~------------------------------~~~~a~~~g-vkr~V~iSS~~~~~~~~~~~~~~~~~a~ 211 (306)
.+|++||+++.. ....+.+.+ -+++|++||.....+......|..+++.
T Consensus 85 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sKaa 164 (261)
T PRK08936 85 TLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQIPWPLFVHYAASKGG 164 (261)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEccccccCCCCCCcccHHHHHH
Confidence 469999984310 011123333 4689999998776665565667554432
Q ss_pred H--HHHHHHHHHHhcCCCEEEEEcCcccCCCCCCc---cee---eecCCCCccccCHHHHHHHHHHHhhCCC--CCCcEE
Q 021854 212 K--LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQ---GFQ---FEEGCAANGSLSKEDAAFICVEALESIP--QTGLIF 281 (306)
Q Consensus 212 ~--~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~~---~~~---~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~~ 281 (306)
. +.+.....+...+++++.|+||++........ ... +........+.+++|+|+.+.+++.+.. ..|..+
T Consensus 165 ~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i 244 (261)
T PRK08936 165 VKLMTETLAMEYAPKGIRVNNIGPGAINTPINAEKFADPKQRADVESMIPMGYIGKPEEIAAVAAWLASSEASYVTGITL 244 (261)
T ss_pred HHHHHHHHHHHHhhcCeEEEEEEECcCCCCccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCcccCCccCcEE
Confidence 1 12222223445789999999998653321110 000 0011112346788999999999887543 356677
Q ss_pred EEecCC
Q 021854 282 EVVNGE 287 (306)
Q Consensus 282 ~v~~g~ 287 (306)
.+.++.
T Consensus 245 ~~d~g~ 250 (261)
T PRK08936 245 FADGGM 250 (261)
T ss_pred EECCCc
Confidence 776654
|
|
| >PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.53 E-value=3.2e-13 Score=121.99 Aligned_cols=187 Identities=14% Similarity=0.136 Sum_probs=124.2
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhc-------CccEEEE
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR-------GVRSIIC 169 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~-------~~d~vi~ 169 (306)
..+++++||||+|+||++++++|+++|++|+++.|+..+.. ..++.++.+|++|.++++++++ .+|++||
T Consensus 7 l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~ 83 (266)
T PRK06171 7 LQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQ---HENYQFVPTDVSSAEEVNHTVAEIIEKFGRIDGLVN 83 (266)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCccccc---cCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 45789999999999999999999999999999999876542 2367889999999988877664 4699999
Q ss_pred cCCch-----------------------------------hhhc----ccccCCCEEEEecCcccccCCCCcccccchHH
Q 021854 170 PSEGF-----------------------------------ISNA----GSLKGVQHVILLSQLSVYRGSGGIQALMKGNA 210 (306)
Q Consensus 170 ~~~g~-----------------------------------~~~~----a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a 210 (306)
+++.. +..+ ..+.+-.+||++||..+..+..+...|..+++
T Consensus 84 ~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~ 163 (266)
T PRK06171 84 NAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAGLEGSEGQSCYAATKA 163 (266)
T ss_pred CCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEccccccCCCCCCchhHHHHH
Confidence 84310 0011 12234468999999888766656566655433
Q ss_pred HH--HHHHHHHHHHhcCCCEEEEEcCcccCCCC-C---Ccce-------------eeec--CCCCccccCHHHHHHHHHH
Q 021854 211 RK--LAEQDESMLMASGIPYTIIRTGVLQNTPG-G---KQGF-------------QFEE--GCAANGSLSKEDAAFICVE 269 (306)
Q Consensus 211 ~~--~~~~aE~~l~~sgi~~tiiRPg~l~~~~~-~---~~~~-------------~~~~--g~~~~~~Is~~DVA~~iv~ 269 (306)
.. +.+.....+...+++++.|+||.+..... . .... .+.. ......+..++|||.++..
T Consensus 164 a~~~l~~~la~e~~~~gi~v~~v~pG~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~eva~~~~f 243 (266)
T PRK06171 164 ALNSFTRSWAKELGKHNIRVVGVAPGILEATGLRTPEYEEALAYTRGITVEQLRAGYTKTSTIPLGRSGKLSEVADLVCY 243 (266)
T ss_pred HHHHHHHHHHHHhhhcCeEEEEEeccccccCCCcChhhhhhhccccCCCHHHHHhhhcccccccCCCCCCHHHhhhheee
Confidence 21 11222222345789999999998642111 0 0000 0000 1112335677999999999
Q ss_pred HhhCCC--CCCcEEEEecC
Q 021854 270 ALESIP--QTGLIFEVVNG 286 (306)
Q Consensus 270 aL~~~~--~~g~~~~v~~g 286 (306)
++.... -.|+++.+.+|
T Consensus 244 l~s~~~~~itG~~i~vdgg 262 (266)
T PRK06171 244 LLSDRASYITGVTTNIAGG 262 (266)
T ss_pred eeccccccceeeEEEecCc
Confidence 987543 35788888765
|
|
| >TIGR02415 23BDH acetoin reductases | Back alignment and domain information |
|---|
Probab=99.53 E-value=3.1e-13 Score=120.87 Aligned_cols=187 Identities=17% Similarity=0.120 Sum_probs=119.8
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhh------hcCCCceeeeccCCCHHHHHHHhc-------CccE
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTALR-------GVRS 166 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~------~~~~~v~~v~~D~~d~~~l~~~~~-------~~d~ 166 (306)
++++||||+|+||.+++++|++.|++|+++.|+.+...+ ..+.++.++.+|++|.+++.++++ .+|+
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~ 80 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFDV 80 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 579999999999999999999999999999998754321 123467889999999988877654 4699
Q ss_pred EEEcCCch--------------------------h----hhcccccC-CCEEEEecCcccccCCCCcccccchHHHHH--
Q 021854 167 IICPSEGF--------------------------I----SNAGSLKG-VQHVILLSQLSVYRGSGGIQALMKGNARKL-- 213 (306)
Q Consensus 167 vi~~~~g~--------------------------~----~~~a~~~g-vkr~V~iSS~~~~~~~~~~~~~~~~~a~~~-- 213 (306)
|||+++.. + ...+++.+ .+++|++||..+..+......|..+++...
T Consensus 81 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~ 160 (254)
T TIGR02415 81 MVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGHEGNPILSAYSSTKFAVRGL 160 (254)
T ss_pred EEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhcCCCCCCcchHHHHHHHHHH
Confidence 99984310 0 01112222 368999999877666556666655432211
Q ss_pred HHHHHHHHHhcCCCEEEEEcCcccCCCCCC--------cceeee-------cCCCCccccCHHHHHHHHHHHhhCCCC--
Q 021854 214 AEQDESMLMASGIPYTIIRTGVLQNTPGGK--------QGFQFE-------EGCAANGSLSKEDAAFICVEALESIPQ-- 276 (306)
Q Consensus 214 ~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~--------~~~~~~-------~g~~~~~~Is~~DVA~~iv~aL~~~~~-- 276 (306)
.+.....+...++.+++|+||++....... .....+ .......+.+++|+|+++..++..+..
T Consensus 161 ~~~l~~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~ 240 (254)
T TIGR02415 161 TQTAAQELAPKGITVNAYCPGIVKTPMWEEIDEETSEIAGKPIGEGFEEFSSEIALGRPSEPEDVAGLVSFLASEDSDYI 240 (254)
T ss_pred HHHHHHHhcccCeEEEEEecCcccChhhhhhhhhhhhcccCchHHHHHHHHhhCCCCCCCCHHHHHHHHHhhcccccCCc
Confidence 111111223458999999999864221100 000000 001113367889999999999987542
Q ss_pred CCcEEEEecC
Q 021854 277 TGLIFEVVNG 286 (306)
Q Consensus 277 ~g~~~~v~~g 286 (306)
.|..+.+.++
T Consensus 241 ~g~~~~~d~g 250 (254)
T TIGR02415 241 TGQSILVDGG 250 (254)
T ss_pred cCcEEEecCC
Confidence 4666666654
|
One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733). |
| >PRK06500 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.53 E-value=5.2e-13 Score=118.97 Aligned_cols=190 Identities=15% Similarity=0.120 Sum_probs=118.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhh---hcCCCceeeeccCCCHHHHHHHh-------cCccEE
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTAL-------RGVRSI 167 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~---~~~~~v~~v~~D~~d~~~l~~~~-------~~~d~v 167 (306)
++++++||||+|+||++++++|+++|++|+++.|+.++..+ ..+.++.++.+|+.|.+++..++ ..+|++
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 84 (249)
T PRK06500 5 QGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQALAEAFGRLDAV 84 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 46899999999999999999999999999999998765332 23456788999999987765544 367999
Q ss_pred EEcCCch--------------------------hhhcccc--cCCCEEEEecCcccccCCCCcccccchHHHHHH--HHH
Q 021854 168 ICPSEGF--------------------------ISNAGSL--KGVQHVILLSQLSVYRGSGGIQALMKGNARKLA--EQD 217 (306)
Q Consensus 168 i~~~~g~--------------------------~~~~a~~--~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~~~--~~a 217 (306)
||+++.. +.+++.. ....++|++||..+..+......|..+++.... +..
T Consensus 85 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~i~~~S~~~~~~~~~~~~Y~~sK~a~~~~~~~l 164 (249)
T PRK06500 85 FINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLANPASIVLNGSINAHIGMPNSSVYAASKAALLSLAKTL 164 (249)
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEechHhccCCCCccHHHHHHHHHHHHHHHH
Confidence 9984310 1112211 123578888886665444445556443322111 111
Q ss_pred HHHHHhcCCCEEEEEcCcccCCCCCC---ccee-------eecCCCCccccCHHHHHHHHHHHhhCCC--CCCcEEEEec
Q 021854 218 ESMLMASGIPYTIIRTGVLQNTPGGK---QGFQ-------FEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVN 285 (306)
Q Consensus 218 E~~l~~sgi~~tiiRPg~l~~~~~~~---~~~~-------~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~~~v~~ 285 (306)
...+...+++++++|||.+....... .... +........+.+++|+|+++++++.++. ..|..+.+.+
T Consensus 165 a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~i~~~g 244 (249)
T PRK06500 165 SGELLPRGIRVNAVSPGPVQTPLYGKLGLPEATLDAVAAQIQALVPLGRFGTPEEIAKAVLYLASDESAFIVGSEIIVDG 244 (249)
T ss_pred HHHhhhcCeEEEEEeeCcCCCHHHHhhccCccchHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCccCCeEEECC
Confidence 11123468999999999864321100 0000 0011111234588999999999887543 3467777776
Q ss_pred CC
Q 021854 286 GE 287 (306)
Q Consensus 286 g~ 287 (306)
|.
T Consensus 245 g~ 246 (249)
T PRK06500 245 GM 246 (249)
T ss_pred Cc
Confidence 53
|
|
| >PRK09730 putative NAD(P)-binding oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.52 E-value=2.6e-13 Score=120.60 Aligned_cols=187 Identities=16% Similarity=0.165 Sum_probs=115.5
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEE-ecCcchhhhh------cCCCceeeeccCCCHHHHHHHhcC-------cc
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKAL-VKDKRNAMES------FGTYVESMAGDASNKKFLKTALRG-------VR 165 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l-~R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~~~~-------~d 165 (306)
++++||||+|+||++++++|+++|++|+++ .|+.++..+. .+.++..+.+|+.|.++++++++. +|
T Consensus 2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~id 81 (247)
T PRK09730 2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDEPLA 81 (247)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhCCCCC
Confidence 689999999999999999999999999875 4655442211 234578899999999988887764 48
Q ss_pred EEEEcCCch-----h----------------------hhc-----ccc--cCCCEEEEecCcccccCCCC-cccccchHH
Q 021854 166 SIICPSEGF-----I----------------------SNA-----GSL--KGVQHVILLSQLSVYRGSGG-IQALMKGNA 210 (306)
Q Consensus 166 ~vi~~~~g~-----~----------------------~~~-----a~~--~gvkr~V~iSS~~~~~~~~~-~~~~~~~~a 210 (306)
++||+++.. . .++ .+. .+.++||++||..++.+... ...|..+++
T Consensus 82 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~~~~~~~~Y~~sK~ 161 (247)
T PRK09730 82 ALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLGAPGEYVDYAASKG 161 (247)
T ss_pred EEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhccCCCCcccchHhHHH
Confidence 999984311 0 000 011 12357999999877654332 234544332
Q ss_pred HH--HHHHHHHHHHhcCCCEEEEEcCcccCCCCCCccee-----eecCCCCccccCHHHHHHHHHHHhhCCC--CCCcEE
Q 021854 211 RK--LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQ-----FEEGCAANGSLSKEDAAFICVEALESIP--QTGLIF 281 (306)
Q Consensus 211 ~~--~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~~~~~-----~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~~ 281 (306)
.. +.+.....+...+++++++|||++........... ...........+++|+|++++.++.++. ..|..+
T Consensus 162 ~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~~~~~~g~~~ 241 (247)
T PRK09730 162 AIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMHASGGEPGRVDRVKSNIPMQRGGQPEEVAQAIVWLLSDKASYVTGSFI 241 (247)
T ss_pred HHHHHHHHHHHHHHHhCeEEEEEEeCCCcCcccccCCCHHHHHHHHhcCCCCCCcCHHHHHHHHHhhcChhhcCccCcEE
Confidence 21 11112222335689999999999653321110000 0000111123478999999999887542 457778
Q ss_pred EEecC
Q 021854 282 EVVNG 286 (306)
Q Consensus 282 ~v~~g 286 (306)
.+.++
T Consensus 242 ~~~g~ 246 (247)
T PRK09730 242 DLAGG 246 (247)
T ss_pred ecCCC
Confidence 77754
|
|
| >PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.52 E-value=8.4e-13 Score=119.09 Aligned_cols=187 Identities=16% Similarity=0.157 Sum_probs=122.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhh---hcCCCceeeeccCCCHHHHHHHhc-------CccEE
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALR-------GVRSI 167 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~---~~~~~v~~v~~D~~d~~~l~~~~~-------~~d~v 167 (306)
.+++++||||+|+||++++++|+++|++|+++.|+.++... ..+.++.++.+|++|.++++.+++ .+|++
T Consensus 5 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l 84 (263)
T PRK06200 5 HGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDAFGKLDCF 84 (263)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHhcCCCCEE
Confidence 46899999999999999999999999999999998866432 234467889999999988877664 46999
Q ss_pred EEcCCch-----h--------------------------hhc----ccccCCCEEEEecCcccccCCCCcccccchHHHH
Q 021854 168 ICPSEGF-----I--------------------------SNA----GSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK 212 (306)
Q Consensus 168 i~~~~g~-----~--------------------------~~~----a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~ 212 (306)
||+++-. + ... +++. -.++|++||..++.+..+...|..+++..
T Consensus 85 i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~g~iv~~sS~~~~~~~~~~~~Y~~sK~a~ 163 (263)
T PRK06200 85 VGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKAS-GGSMIFTLSNSSFYPGGGGPLYTASKHAV 163 (263)
T ss_pred EECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhc-CCEEEEECChhhcCCCCCCchhHHHHHHH
Confidence 9984310 0 000 1112 25899999988876655555665543321
Q ss_pred HH--HHHHHHHHhcCCCEEEEEcCcccCCCCCC-------cce---e-----eecCCCCccccCHHHHHHHHHHHhhCC-
Q 021854 213 LA--EQDESMLMASGIPYTIIRTGVLQNTPGGK-------QGF---Q-----FEEGCAANGSLSKEDAAFICVEALESI- 274 (306)
Q Consensus 213 ~~--~~aE~~l~~sgi~~tiiRPg~l~~~~~~~-------~~~---~-----~~~g~~~~~~Is~~DVA~~iv~aL~~~- 274 (306)
.. +..-..+. .+|+++.|.||++....... ... . +........+..++|+|.+++.++.+.
T Consensus 164 ~~~~~~la~el~-~~Irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~eva~~~~fl~s~~~ 242 (263)
T PRK06200 164 VGLVRQLAYELA-PKIRVNGVAPGGTVTDLRGPASLGQGETSISDSPGLADMIAAITPLQFAPQPEDHTGPYVLLASRRN 242 (263)
T ss_pred HHHHHHHHHHHh-cCcEEEEEeCCccccCCcCccccCCCCcccccccchhHHhhcCCCCCCCCCHHHHhhhhhheecccc
Confidence 11 11111122 35999999999864322100 000 0 000011133567899999999998754
Q ss_pred C--CCCcEEEEecC
Q 021854 275 P--QTGLIFEVVNG 286 (306)
Q Consensus 275 ~--~~g~~~~v~~g 286 (306)
. ..|+.+.+.+|
T Consensus 243 ~~~itG~~i~vdgG 256 (263)
T PRK06200 243 SRALTGVVINADGG 256 (263)
T ss_pred cCcccceEEEEcCc
Confidence 2 46788888766
|
|
| >PRK06125 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.52 E-value=5.1e-13 Score=120.24 Aligned_cols=190 Identities=13% Similarity=0.101 Sum_probs=123.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh-------cCCCceeeeccCCCHHHHHHHhc---CccEE
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------FGTYVESMAGDASNKKFLKTALR---GVRSI 167 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~-------~~~~v~~v~~D~~d~~~l~~~~~---~~d~v 167 (306)
.+++++||||+|+||++++++|+++|++|+++.|+.++..+. .+.++.++.+|++|.+++.++++ .+|++
T Consensus 6 ~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id~l 85 (259)
T PRK06125 6 AGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAEAGDIDIL 85 (259)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHhCCCCEE
Confidence 468999999999999999999999999999999988764321 13467889999999988877665 47999
Q ss_pred EEcCCch------------------------------hhhcccccCCCEEEEecCcccccCCCCcccccchHHH--HHHH
Q 021854 168 ICPSEGF------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--KLAE 215 (306)
Q Consensus 168 i~~~~g~------------------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~--~~~~ 215 (306)
||+++.. +...+.+.+-+++|++||.....+......|..+++. .+.+
T Consensus 86 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~ask~al~~~~~ 165 (259)
T PRK06125 86 VNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARGSGVIVNVIGAAGENPDADYICGSAGNAALMAFTR 165 (259)
T ss_pred EECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEecCccccCCCCCchHhHHHHHHHHHHHH
Confidence 9984311 0111233444689999998776554444344332221 1112
Q ss_pred HHHHHHHhcCCCEEEEEcCcccCCCC------C-----Ccce---eeecCCCCccccCHHHHHHHHHHHhhCCC--CCCc
Q 021854 216 QDESMLMASGIPYTIIRTGVLQNTPG------G-----KQGF---QFEEGCAANGSLSKEDAAFICVEALESIP--QTGL 279 (306)
Q Consensus 216 ~aE~~l~~sgi~~tiiRPg~l~~~~~------~-----~~~~---~~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~ 279 (306)
.....+...+++++.|+||++..... . .... .+........+.+++|+|++++.++.+.. ..|.
T Consensus 166 ~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~ 245 (259)
T PRK06125 166 ALGGKSLDDGVRVVGVNPGPVATDRMLTLLKGRARAELGDESRWQELLAGLPLGRPATPEEVADLVAFLASPRSGYTSGT 245 (259)
T ss_pred HHHHHhCccCeEEEEEecCccccHHHHHHHHhhhhcccCCHHHHHHHhccCCcCCCcCHHHHHHHHHHHcCchhccccCc
Confidence 22222345789999999998643210 0 0000 00001112345788999999999986542 4678
Q ss_pred EEEEecCC
Q 021854 280 IFEVVNGE 287 (306)
Q Consensus 280 ~~~v~~g~ 287 (306)
.+.+.+|.
T Consensus 246 ~i~vdgg~ 253 (259)
T PRK06125 246 VVTVDGGI 253 (259)
T ss_pred eEEecCCe
Confidence 88887663
|
|
| >PRK07677 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.52 E-value=7.1e-13 Score=118.83 Aligned_cols=189 Identities=16% Similarity=0.146 Sum_probs=122.2
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh------cCCCceeeeccCCCHHHHHHHhc-------Ccc
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GVR 165 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~~~-------~~d 165 (306)
+|+++||||+|+||++++++|+++|++|+++.|+.++..+. .+..+.++.+|++|.++++++++ .+|
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 80 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRID 80 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCcc
Confidence 47899999999999999999999999999999987653221 23467889999999988877654 569
Q ss_pred EEEEcCCch--------------------------hhhcc----ccc-CCCEEEEecCcccccCCCCcccccchHHHH--
Q 021854 166 SIICPSEGF--------------------------ISNAG----SLK-GVQHVILLSQLSVYRGSGGIQALMKGNARK-- 212 (306)
Q Consensus 166 ~vi~~~~g~--------------------------~~~~a----~~~-gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~-- 212 (306)
++||+++.. +.+++ ... ...+||++||..+..+......|..+++..
T Consensus 81 ~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sKaa~~~ 160 (252)
T PRK07677 81 ALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWDAGPGVIHSAAAKAGVLA 160 (252)
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhccCCCCCcchHHHHHHHHH
Confidence 999984311 11111 122 246899999987766555555565443321
Q ss_pred HHHHHHHHH-HhcCCCEEEEEcCcccCCCCCCc----cee---eecCCCCccccCHHHHHHHHHHHhhCC--CCCCcEEE
Q 021854 213 LAEQDESML-MASGIPYTIIRTGVLQNTPGGKQ----GFQ---FEEGCAANGSLSKEDAAFICVEALESI--PQTGLIFE 282 (306)
Q Consensus 213 ~~~~aE~~l-~~sgi~~tiiRPg~l~~~~~~~~----~~~---~~~g~~~~~~Is~~DVA~~iv~aL~~~--~~~g~~~~ 282 (306)
+.+.....+ ...|++++.|+||.+........ ... +........+..++|+|+++..++... .-.|+++.
T Consensus 161 ~~~~la~e~~~~~gi~v~~v~PG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~ 240 (252)
T PRK07677 161 MTRTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWESEEAAKRTIQSVPLGRLGTPEEIAGLAYFLLSDEAAYINGTCIT 240 (252)
T ss_pred HHHHHHHHhCcccCeEEEEEeecccccccccccccCCHHHHHHHhccCCCCCCCCHHHHHHHHHHHcCccccccCCCEEE
Confidence 111111112 23589999999998763211100 000 000111234678899999999988654 24577888
Q ss_pred EecCC
Q 021854 283 VVNGE 287 (306)
Q Consensus 283 v~~g~ 287 (306)
+.+|.
T Consensus 241 ~~gg~ 245 (252)
T PRK07677 241 MDGGQ 245 (252)
T ss_pred ECCCe
Confidence 87653
|
|
| >PRK12747 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=8.8e-13 Score=118.13 Aligned_cols=190 Identities=18% Similarity=0.125 Sum_probs=119.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEe-cCcchhhh------hcCCCceeeeccCCCHHHHHHHhc--------
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALV-KDKRNAME------SFGTYVESMAGDASNKKFLKTALR-------- 162 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~-R~~~~~~~------~~~~~v~~v~~D~~d~~~l~~~~~-------- 162 (306)
++++++||||+|+||++++++|++.|++|++.. |+.++..+ ..+..+..+.+|++|.+.+..+++
T Consensus 3 ~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (252)
T PRK12747 3 KGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQN 82 (252)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhhh
Confidence 468999999999999999999999999998875 44443221 112356778899999776554331
Q ss_pred -----CccEEEEcCCc----h----------------------hhhcccc--cCCCEEEEecCcccccCCCCcccccchH
Q 021854 163 -----GVRSIICPSEG----F----------------------ISNAGSL--KGVQHVILLSQLSVYRGSGGIQALMKGN 209 (306)
Q Consensus 163 -----~~d~vi~~~~g----~----------------------~~~~a~~--~gvkr~V~iSS~~~~~~~~~~~~~~~~~ 209 (306)
.+|++||+++. . +..++.. .+..+||++||..+..+..+...|..++
T Consensus 83 ~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK 162 (252)
T PRK12747 83 RTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRISLPDFIAYSMTK 162 (252)
T ss_pred hcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCcccccCCCCchhHHHHH
Confidence 58999998431 0 0011111 1236999999998877666666675544
Q ss_pred HHH--HHHHHHHHHHhcCCCEEEEEcCcccCCCCCC---cce--ee-ecCCCCccccCHHHHHHHHHHHhhCCC--CCCc
Q 021854 210 ARK--LAEQDESMLMASGIPYTIIRTGVLQNTPGGK---QGF--QF-EEGCAANGSLSKEDAAFICVEALESIP--QTGL 279 (306)
Q Consensus 210 a~~--~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~---~~~--~~-~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~ 279 (306)
+.. +.+.....+...+++++.|.||++....... ... .+ ........+.+++|+|++++.++.... ..|+
T Consensus 163 aa~~~~~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~ 242 (252)
T PRK12747 163 GAINTMTFTLAKQLGARGITVNAILPGFIKTDMNAELLSDPMMKQYATTISAFNRLGEVEDIADTAAFLASPDSRWVTGQ 242 (252)
T ss_pred HHHHHHHHHHHHHHhHcCCEEEEEecCCccCchhhhcccCHHHHHHHHhcCcccCCCCHHHHHHHHHHHcCccccCcCCc
Confidence 322 1111112234578999999999865332110 000 00 001112346789999999999886432 3578
Q ss_pred EEEEecCC
Q 021854 280 IFEVVNGE 287 (306)
Q Consensus 280 ~~~v~~g~ 287 (306)
.+.+.+|.
T Consensus 243 ~i~vdgg~ 250 (252)
T PRK12747 243 LIDVSGGS 250 (252)
T ss_pred EEEecCCc
Confidence 88887653
|
|
| >COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.51 E-value=1.8e-13 Score=127.31 Aligned_cols=141 Identities=20% Similarity=0.247 Sum_probs=105.2
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCC-CeEEEEecCcch------h----------hhhcCCCceeeeccCC------CHHH
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRN------A----------MESFGTYVESMAGDAS------NKKF 156 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~g-~~V~~l~R~~~~------~----------~~~~~~~v~~v~~D~~------d~~~ 156 (306)
+++++||||||+|.++++.|+.+- .+|++++|..+. + .+....+++++.+|+. +...
T Consensus 1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~~ 80 (382)
T COG3320 1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERT 80 (382)
T ss_pred CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHHH
Confidence 579999999999999999999865 499999998862 1 1233468999999998 4577
Q ss_pred HHHHhcCccEEEEcCCc-------------------hhhhcccccCCCEEEEecCcccccCCCC---------------c
Q 021854 157 LKTALRGVRSIICPSEG-------------------FISNAGSLKGVQHVILLSQLSVYRGSGG---------------I 202 (306)
Q Consensus 157 l~~~~~~~d~vi~~~~g-------------------~~~~~a~~~gvkr~V~iSS~~~~~~~~~---------------~ 202 (306)
+..+.+.+|.|||+++- .++.+|...+.|.++|+||.++...... .
T Consensus 81 ~~~La~~vD~I~H~gA~Vn~v~pYs~L~~~NVlGT~evlrLa~~gk~Kp~~yVSsisv~~~~~~~~~~~~~~~~~~~~~~ 160 (382)
T COG3320 81 WQELAENVDLIIHNAALVNHVFPYSELRGANVLGTAEVLRLAATGKPKPLHYVSSISVGETEYYSNFTVDFDEISPTRNV 160 (382)
T ss_pred HHHHhhhcceEEecchhhcccCcHHHhcCcchHhHHHHHHHHhcCCCceeEEEeeeeeccccccCCCccccccccccccc
Confidence 88888999999998431 1556677788999999999988652110 0
Q ss_pred ccccchHHHHHHHHHHHHHHh---cCCCEEEEEcCcccCCC
Q 021854 203 QALMKGNARKLAEQDESMLMA---SGIPYTIIRTGVLQNTP 240 (306)
Q Consensus 203 ~~~~~~~a~~~~~~aE~~l~~---sgi~~tiiRPg~l~~~~ 240 (306)
.....+.+.+.|+.+|..+++ .|++++|+|||++....
T Consensus 161 ~~~~~~GY~~SKwvaE~Lvr~A~~rGLpv~I~Rpg~I~gds 201 (382)
T COG3320 161 GQGLAGGYGRSKWVAEKLVREAGDRGLPVTIFRPGYITGDS 201 (382)
T ss_pred cCccCCCcchhHHHHHHHHHHHhhcCCCeEEEecCeeeccC
Confidence 011112344557788888875 58999999999976444
|
|
| >PRK07069 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.51 E-value=5.5e-13 Score=118.94 Aligned_cols=186 Identities=9% Similarity=0.060 Sum_probs=117.8
Q ss_pred eEEEEcCCChHHHHHHHHHHHCCCeEEEEecC-cchhhh---hc----C-CCceeeeccCCCHHHHHHHhc-------Cc
Q 021854 101 AVLVTDGDSDIGQMVILSLIVKRTRIKALVKD-KRNAME---SF----G-TYVESMAGDASNKKFLKTALR-------GV 164 (306)
Q Consensus 101 ~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~-~~~~~~---~~----~-~~v~~v~~D~~d~~~l~~~~~-------~~ 164 (306)
+|+||||+|+||+++++.|+++|++|+++.|+ .++..+ .+ . ..+..+.+|++|.+++.++++ .+
T Consensus 1 ~ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 80 (251)
T PRK07069 1 RAFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGL 80 (251)
T ss_pred CEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCc
Confidence 48999999999999999999999999999998 443221 11 1 123457899999988876654 56
Q ss_pred cEEEEcCCch------------------------------hhhcccccCCCEEEEecCcccccCCCCcccccchHHHHH-
Q 021854 165 RSIICPSEGF------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKL- 213 (306)
Q Consensus 165 d~vi~~~~g~------------------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~~- 213 (306)
|++||+++.. +...+.+.+.++||++||..++.+..+...|..+++...
T Consensus 81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~ss~~~~~~~~~~~~Y~~sK~a~~~ 160 (251)
T PRK07069 81 SVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQPASIVNISSVAAFKAEPDYTAYNASKAAVAS 160 (251)
T ss_pred cEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEecChhhccCCCCCchhHHHHHHHHH
Confidence 9999984310 112234456789999999988776666666755443211
Q ss_pred -HHHHHHHHHhc--CCCEEEEEcCcccCCCCCC------ccee---eecCCCCccccCHHHHHHHHHHHhhCCC--CCCc
Q 021854 214 -AEQDESMLMAS--GIPYTIIRTGVLQNTPGGK------QGFQ---FEEGCAANGSLSKEDAAFICVEALESIP--QTGL 279 (306)
Q Consensus 214 -~~~aE~~l~~s--gi~~tiiRPg~l~~~~~~~------~~~~---~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~ 279 (306)
.+.....+... +++++.|+||++....... .... +..+.....+.+++|+|++++.++..+. ..|+
T Consensus 161 ~~~~la~e~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~ 240 (251)
T PRK07069 161 LTKSIALDCARRGLDVRCNSIHPTFIRTGIVDPIFQRLGEEEATRKLARGVPLGRLGEPDDVAHAVLYLASDESRFVTGA 240 (251)
T ss_pred HHHHHHHHhcccCCcEEEEEEeecccCCcchhHHhhhccchhHHHHHhccCCCCCCcCHHHHHHHHHHHcCccccCccCC
Confidence 11111112223 5889999999864332110 0000 0011112345688999999999876542 3466
Q ss_pred EEEEecC
Q 021854 280 IFEVVNG 286 (306)
Q Consensus 280 ~~~v~~g 286 (306)
.+.+.+|
T Consensus 241 ~i~~~~g 247 (251)
T PRK07069 241 ELVIDGG 247 (251)
T ss_pred EEEECCC
Confidence 6666554
|
|
| >PRK08278 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=1.6e-12 Score=118.29 Aligned_cols=176 Identities=15% Similarity=0.115 Sum_probs=113.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchh-------h---h---hcCCCceeeeccCCCHHHHHHHhc--
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-------M---E---SFGTYVESMAGDASNKKFLKTALR-- 162 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~-------~---~---~~~~~v~~v~~D~~d~~~l~~~~~-- 162 (306)
.+++++||||+|+||++++++|+++|++|+++.|+.++. . + ..+.++.++.+|++|.+++.++++
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~ 84 (273)
T PRK08278 5 SGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVAKA 84 (273)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHH
Confidence 468999999999999999999999999999999976431 1 0 123467788999999998877765
Q ss_pred -----CccEEEEcCCch--------------------------hhhc----ccccCCCEEEEecCcccccCC--CCcccc
Q 021854 163 -----GVRSIICPSEGF--------------------------ISNA----GSLKGVQHVILLSQLSVYRGS--GGIQAL 205 (306)
Q Consensus 163 -----~~d~vi~~~~g~--------------------------~~~~----a~~~gvkr~V~iSS~~~~~~~--~~~~~~ 205 (306)
.+|++||+++.. +.++ ..+.+-.++|++||.....+. .+...|
T Consensus 85 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~Y 164 (273)
T PRK08278 85 VERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPPLNLDPKWFAPHTAY 164 (273)
T ss_pred HHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCchhccccccCCcchh
Confidence 579999984310 1111 222344689999987655443 444556
Q ss_pred cchHHHH--HHHHHHHHHHhcCCCEEEEEcCcccCCCCCCcceeeecCCCCccccCHHHHHHHHHHHhhCCC
Q 021854 206 MKGNARK--LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIP 275 (306)
Q Consensus 206 ~~~~a~~--~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~~~~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~ 275 (306)
..+++.. +.+.....+...+++++.|.||.+.+.+.... . .........+.+++|+|++++.++..+.
T Consensus 165 ~~sK~a~~~~~~~la~el~~~~I~v~~i~Pg~~i~t~~~~~-~-~~~~~~~~~~~~p~~va~~~~~l~~~~~ 234 (273)
T PRK08278 165 TMAKYGMSLCTLGLAEEFRDDGIAVNALWPRTTIATAAVRN-L-LGGDEAMRRSRTPEIMADAAYEILSRPA 234 (273)
T ss_pred HHHHHHHHHHHHHHHHHhhhcCcEEEEEeCCCccccHHHHh-c-ccccccccccCCHHHHHHHHHHHhcCcc
Confidence 5433321 11111122334689999999995433321111 1 0111112346789999999999987653
|
|
| >PRK08226 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=8e-13 Score=119.05 Aligned_cols=190 Identities=12% Similarity=0.087 Sum_probs=119.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchh---hhh--cCCCceeeeccCCCHHHHHHHhc-------Ccc
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA---MES--FGTYVESMAGDASNKKFLKTALR-------GVR 165 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~---~~~--~~~~v~~v~~D~~d~~~l~~~~~-------~~d 165 (306)
.+++++||||+|+||++++++|+++|++|+++.|+.+.. .+. .+.++.++.+|++|.++++.+++ .+|
T Consensus 5 ~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id 84 (263)
T PRK08226 5 TGKTALITGALQGIGEGIARVFARHGANLILLDISPEIEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGRID 84 (263)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 469999999999999999999999999999999987431 111 12357789999999988887765 469
Q ss_pred EEEEcCCch--------------------------hhhc----ccccCCCEEEEecCcccc-cCCCCcccccchHHHH--
Q 021854 166 SIICPSEGF--------------------------ISNA----GSLKGVQHVILLSQLSVY-RGSGGIQALMKGNARK-- 212 (306)
Q Consensus 166 ~vi~~~~g~--------------------------~~~~----a~~~gvkr~V~iSS~~~~-~~~~~~~~~~~~~a~~-- 212 (306)
++||+++.. +.+. +...+.++||++||..+. .+......|..+++..
T Consensus 85 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~Y~~sK~a~~~ 164 (263)
T PRK08226 85 ILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMVADPGETAYALTKAAIVG 164 (263)
T ss_pred EEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhcccCCCCcchHHHHHHHHHH
Confidence 999984310 1111 223456789999987653 3333334454333211
Q ss_pred HHHHHHHHHHhcCCCEEEEEcCcccCCCCCC--------cc--e--eeecCCCCccccCHHHHHHHHHHHhhCC--CCCC
Q 021854 213 LAEQDESMLMASGIPYTIIRTGVLQNTPGGK--------QG--F--QFEEGCAANGSLSKEDAAFICVEALESI--PQTG 278 (306)
Q Consensus 213 ~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~--------~~--~--~~~~g~~~~~~Is~~DVA~~iv~aL~~~--~~~g 278 (306)
+.+.....+...+++++.|+||++....... .. . .+........+.+++|+|+++..++... ...|
T Consensus 165 ~~~~la~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~~~~~l~~~~~~~~~g 244 (263)
T PRK08226 165 LTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNPEDPESVLTEMAKAIPLRRLADPLEVGELAAFLASDESSYLTG 244 (263)
T ss_pred HHHHHHHHhcccCcEEEEEecCcccCHHHHhhhhhccCCCcHHHHHHHhccCCCCCCCCHHHHHHHHHHHcCchhcCCcC
Confidence 1111111122358999999999864321100 00 0 0011112233568999999999988643 3457
Q ss_pred cEEEEecCC
Q 021854 279 LIFEVVNGE 287 (306)
Q Consensus 279 ~~~~v~~g~ 287 (306)
+.+.+.+|-
T Consensus 245 ~~i~~dgg~ 253 (263)
T PRK08226 245 TQNVIDGGS 253 (263)
T ss_pred ceEeECCCc
Confidence 778887653
|
|
| >TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.51 E-value=6.2e-13 Score=135.70 Aligned_cols=191 Identities=16% Similarity=0.153 Sum_probs=125.9
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh-------cC-CCceeeeccCCCHHHHHHHhc------
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------FG-TYVESMAGDASNKKFLKTALR------ 162 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~-------~~-~~v~~v~~D~~d~~~l~~~~~------ 162 (306)
..+++++||||+|+||++++++|+++|++|+++.|+.+..... .+ ..+..+.+|++|.+++.++++
T Consensus 412 l~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~~ 491 (676)
T TIGR02632 412 LARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALAY 491 (676)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHhc
Confidence 3578999999999999999999999999999999987653321 12 256788999999998888776
Q ss_pred -CccEEEEcCCch--------------------------h----hhcccccC-CCEEEEecCcccccCCCCcccccchHH
Q 021854 163 -GVRSIICPSEGF--------------------------I----SNAGSLKG-VQHVILLSQLSVYRGSGGIQALMKGNA 210 (306)
Q Consensus 163 -~~d~vi~~~~g~--------------------------~----~~~a~~~g-vkr~V~iSS~~~~~~~~~~~~~~~~~a 210 (306)
++|++||+++.. + ...+++.+ -.+||++||..+..+..+...|..+++
T Consensus 492 g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~~~~~~~~aY~aSKa 571 (676)
T TIGR02632 492 GGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVYAGKNASAYSAAKA 571 (676)
T ss_pred CCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhcCCCCCCHHHHHHHH
Confidence 679999984310 0 01122233 358999999877666555566655433
Q ss_pred HHHH--HHHHHHHHhcCCCEEEEEcCcccCCCC-CCc----------cee-------eecCCCCccccCHHHHHHHHHHH
Q 021854 211 RKLA--EQDESMLMASGIPYTIIRTGVLQNTPG-GKQ----------GFQ-------FEEGCAANGSLSKEDAAFICVEA 270 (306)
Q Consensus 211 ~~~~--~~aE~~l~~sgi~~tiiRPg~l~~~~~-~~~----------~~~-------~~~g~~~~~~Is~~DVA~~iv~a 270 (306)
.... +.....+...+|+++.|+||.+..... ... ++. +........+++++|||++++.+
T Consensus 572 A~~~l~r~lA~el~~~gIrVn~V~Pg~V~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~r~v~peDVA~av~~L 651 (676)
T TIGR02632 572 AEAHLARCLAAEGGTYGIRVNTVNPDAVLQGSGIWDGEWREERAAAYGIPADELEEHYAKRTLLKRHIFPADIAEAVFFL 651 (676)
T ss_pred HHHHHHHHHHHHhcccCeEEEEEECCceecCcccccccchhhhhhcccCChHHHHHHHHhcCCcCCCcCHHHHHHHHHHH
Confidence 2211 111112234689999999998642111 000 000 11122224468899999999998
Q ss_pred hhCC--CCCCcEEEEecCC
Q 021854 271 LESI--PQTGLIFEVVNGE 287 (306)
Q Consensus 271 L~~~--~~~g~~~~v~~g~ 287 (306)
+.+. ...|+++++.+|.
T Consensus 652 ~s~~~~~~TG~~i~vDGG~ 670 (676)
T TIGR02632 652 ASSKSEKTTGCIITVDGGV 670 (676)
T ss_pred hCCcccCCcCcEEEECCCc
Confidence 8653 3458889988765
|
|
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.50 E-value=1.1e-12 Score=133.18 Aligned_cols=173 Identities=16% Similarity=0.194 Sum_probs=120.9
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh------cCCCceeeeccCCCHHHHHHHhc-------C
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------G 163 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~~~-------~ 163 (306)
..+++++||||+|+||++++++|+++|++|+++.|+.++..+. .+.++.++.+|++|.++++++++ .
T Consensus 369 ~~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~ 448 (657)
T PRK07201 369 LVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAEHGH 448 (657)
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Confidence 4468999999999999999999999999999999988763321 13468889999999998887776 5
Q ss_pred ccEEEEcCCch--------------------------------hhhcccccCCCEEEEecCcccccCCCCcccccchHHH
Q 021854 164 VRSIICPSEGF--------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR 211 (306)
Q Consensus 164 ~d~vi~~~~g~--------------------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~ 211 (306)
+|++||+++.. +...+.+.+.++||++||.+++.+......|..+++.
T Consensus 449 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a 528 (657)
T PRK07201 449 VDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERRFGHVVNVSSIGVQTNAPRFSAYVASKAA 528 (657)
T ss_pred CCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCCCcchHHHHHHH
Confidence 79999984310 0112334567899999999888766555566554332
Q ss_pred H--HHHHHHHHHHhcCCCEEEEEcCcccCCCCCCcceeeecCCCCccccCHHHHHHHHHHHhhCC
Q 021854 212 K--LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESI 274 (306)
Q Consensus 212 ~--~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~~~~~~~~g~~~~~~Is~~DVA~~iv~aL~~~ 274 (306)
. +.+.....+...+++++.|+||++........ ..+ .....++++++|+.++..+...
T Consensus 529 ~~~~~~~la~e~~~~~i~v~~v~pg~v~T~~~~~~-~~~----~~~~~~~~~~~a~~i~~~~~~~ 588 (657)
T PRK07201 529 LDAFSDVAASETLSDGITFTTIHMPLVRTPMIAPT-KRY----NNVPTISPEEAADMVVRAIVEK 588 (657)
T ss_pred HHHHHHHHHHHHHhhCCcEEEEECCcCcccccCcc-ccc----cCCCCCCHHHHHHHHHHHHHhC
Confidence 1 11112222335789999999998653322111 001 1234689999999999988653
|
|
| >PRK06198 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.50 E-value=1.7e-12 Score=116.53 Aligned_cols=191 Identities=10% Similarity=0.106 Sum_probs=124.2
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCe-EEEEecCcchhhh------hcCCCceeeeccCCCHHHHHHHhc-------
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTR-IKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTALR------- 162 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~-V~~l~R~~~~~~~------~~~~~v~~v~~D~~d~~~l~~~~~------- 162 (306)
.++++|+||||+|+||+.++++|+++|++ |+++.|+.++... ..+..+.++.+|++|.+++.++++
T Consensus 4 ~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 83 (260)
T PRK06198 4 LDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAFG 83 (260)
T ss_pred CCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 35689999999999999999999999998 9999998755321 123457788999999988877664
Q ss_pred CccEEEEcCCch--------------------------hhhc----cccc-CCCEEEEecCcccccCCCCcccccchHHH
Q 021854 163 GVRSIICPSEGF--------------------------ISNA----GSLK-GVQHVILLSQLSVYRGSGGIQALMKGNAR 211 (306)
Q Consensus 163 ~~d~vi~~~~g~--------------------------~~~~----a~~~-gvkr~V~iSS~~~~~~~~~~~~~~~~~a~ 211 (306)
++|++||+++.. +.++ ..+. ...++|++||..++.+......|..++..
T Consensus 84 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~~sK~a 163 (260)
T PRK06198 84 RLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGGQPFLAAYCASKGA 163 (260)
T ss_pred CCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCcccccCCCCcchhHHHHHH
Confidence 579999984310 0111 1122 24689999998887655555566543321
Q ss_pred H--HHHHHHHHHHhcCCCEEEEEcCcccCCCCCC--------cceee---ecCCCCccccCHHHHHHHHHHHhhCCC--C
Q 021854 212 K--LAEQDESMLMASGIPYTIIRTGVLQNTPGGK--------QGFQF---EEGCAANGSLSKEDAAFICVEALESIP--Q 276 (306)
Q Consensus 212 ~--~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~--------~~~~~---~~g~~~~~~Is~~DVA~~iv~aL~~~~--~ 276 (306)
. +.+.....+...+++++.++||++....... ..... ........+++.+|+|++++.++.... .
T Consensus 164 ~~~~~~~~a~e~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~ 243 (260)
T PRK06198 164 LATLTRNAAYALLRNRIRVNGLNIGWMATEGEDRIQREFHGAPDDWLEKAAATQPFGRLLDPDEVARAVAFLLSDESGLM 243 (260)
T ss_pred HHHHHHHHHHHhcccCeEEEEEeeccccCcchhhhhhhccCCChHHHHHHhccCCccCCcCHHHHHHHHHHHcChhhCCc
Confidence 1 1111111223467999999999864332100 00000 011112346799999999999886543 4
Q ss_pred CCcEEEEecCC
Q 021854 277 TGLIFEVVNGE 287 (306)
Q Consensus 277 ~g~~~~v~~g~ 287 (306)
.|+++.+.++.
T Consensus 244 ~G~~~~~~~~~ 254 (260)
T PRK06198 244 TGSVIDFDQSV 254 (260)
T ss_pred cCceEeECCcc
Confidence 68888888765
|
|
| >PRK07831 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.50 E-value=1.3e-12 Score=117.82 Aligned_cols=188 Identities=13% Similarity=0.093 Sum_probs=121.8
Q ss_pred CCCeEEEEcCCC-hHHHHHHHHHHHCCCeEEEEecCcchhhhh-------cC-CCceeeeccCCCHHHHHHHhc------
Q 021854 98 ARDAVLVTDGDS-DIGQMVILSLIVKRTRIKALVKDKRNAMES-------FG-TYVESMAGDASNKKFLKTALR------ 162 (306)
Q Consensus 98 ~~~~ilVtGatG-~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~-------~~-~~v~~v~~D~~d~~~l~~~~~------ 162 (306)
.+++++||||+| +||++++++|+++|++|+++.|+.++..+. ++ .++.++.+|++|.++++++++
T Consensus 16 ~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 95 (262)
T PRK07831 16 AGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVERL 95 (262)
T ss_pred CCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 468999999997 799999999999999999999887653221 23 367889999999988877664
Q ss_pred -CccEEEEcCCch--------------------------h----hhcccccC-CCEEEEecCcccccCCCCcccccchHH
Q 021854 163 -GVRSIICPSEGF--------------------------I----SNAGSLKG-VQHVILLSQLSVYRGSGGIQALMKGNA 210 (306)
Q Consensus 163 -~~d~vi~~~~g~--------------------------~----~~~a~~~g-vkr~V~iSS~~~~~~~~~~~~~~~~~a 210 (306)
.+|++||+++.. + .......+ -.++|++||..+..+..+...|..+++
T Consensus 96 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~~sKa 175 (262)
T PRK07831 96 GRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGWRAQHGQAHYAAAKA 175 (262)
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCCCCcchHHHHH
Confidence 469999984310 0 11122233 468999999877666555556654433
Q ss_pred HHH--HHHHHHHHHhcCCCEEEEEcCcccCCCCCC--cce---eeecCCCCccccCHHHHHHHHHHHhhCCC--CCCcEE
Q 021854 211 RKL--AEQDESMLMASGIPYTIIRTGVLQNTPGGK--QGF---QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIF 281 (306)
Q Consensus 211 ~~~--~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~--~~~---~~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~~ 281 (306)
... .+.....+...+|+++.|+||.+....... ... .+........+..++|+|++++.++.... -.|+++
T Consensus 176 al~~~~~~la~e~~~~gI~v~~i~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~r~~~p~~va~~~~~l~s~~~~~itG~~i 255 (262)
T PRK07831 176 GVMALTRCSALEAAEYGVRINAVAPSIAMHPFLAKVTSAELLDELAAREAFGRAAEPWEVANVIAFLASDYSSYLTGEVV 255 (262)
T ss_pred HHHHHHHHHHHHhCccCeEEEEEeeCCccCcccccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCcCCceE
Confidence 211 111111223468999999999864322110 000 01111122346688999999999887543 357777
Q ss_pred EEec
Q 021854 282 EVVN 285 (306)
Q Consensus 282 ~v~~ 285 (306)
.+.+
T Consensus 256 ~v~~ 259 (262)
T PRK07831 256 SVSS 259 (262)
T ss_pred EeCC
Confidence 7765
|
|
| >PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.49 E-value=1.3e-12 Score=117.76 Aligned_cols=190 Identities=16% Similarity=0.019 Sum_probs=121.5
Q ss_pred cCCCeEEEEcCCC--hHHHHHHHHHHHCCCeEEEEecCc-----------ch---hhh---hcCCCceeeeccCCCHHHH
Q 021854 97 EARDAVLVTDGDS--DIGQMVILSLIVKRTRIKALVKDK-----------RN---AME---SFGTYVESMAGDASNKKFL 157 (306)
Q Consensus 97 ~~~~~ilVtGatG--~iG~~l~~~L~~~g~~V~~l~R~~-----------~~---~~~---~~~~~v~~v~~D~~d~~~l 157 (306)
..+++++||||+| +||++++++|+++|++|++..|.. +. ..+ ..+..+.++.+|++|.+++
T Consensus 4 l~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~i 83 (256)
T PRK12859 4 LKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQNDAP 83 (256)
T ss_pred cCCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHH
Confidence 4579999999994 899999999999999998875421 11 111 1234677889999999888
Q ss_pred HHHhc-------CccEEEEcCCch------------------------------hhhcccccCCCEEEEecCcccccCCC
Q 021854 158 KTALR-------GVRSIICPSEGF------------------------------ISNAGSLKGVQHVILLSQLSVYRGSG 200 (306)
Q Consensus 158 ~~~~~-------~~d~vi~~~~g~------------------------------~~~~a~~~gvkr~V~iSS~~~~~~~~ 200 (306)
+++++ ..|++|++++.. +...+++.+-++||++||..+..+..
T Consensus 84 ~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~ 163 (256)
T PRK12859 84 KELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKSGGRIINMTSGQFQGPMV 163 (256)
T ss_pred HHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEEcccccCCCCC
Confidence 77664 359999884310 11223334456999999988776655
Q ss_pred CcccccchHHHH--HHHHHHHHHHhcCCCEEEEEcCcccCCCCCCc-ceeeecCCCCccccCHHHHHHHHHHHhhCCC--
Q 021854 201 GIQALMKGNARK--LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQ-GFQFEEGCAANGSLSKEDAAFICVEALESIP-- 275 (306)
Q Consensus 201 ~~~~~~~~~a~~--~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~~-~~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~-- 275 (306)
+...|..+++.. +.+.....+...+++++.|+||++........ ...+...........++|+|+++..++....
T Consensus 164 ~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~ 243 (256)
T PRK12859 164 GELAYAATKGAIDALTSSLAAEVAHLGITVNAINPGPTDTGWMTEEIKQGLLPMFPFGRIGEPKDAARLIKFLASEEAEW 243 (256)
T ss_pred CchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEEccccCCCCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccC
Confidence 556665544322 12222233445789999999998654321110 0000000111234678999999999886543
Q ss_pred CCCcEEEEecC
Q 021854 276 QTGLIFEVVNG 286 (306)
Q Consensus 276 ~~g~~~~v~~g 286 (306)
..|+.+.+.+|
T Consensus 244 ~~G~~i~~dgg 254 (256)
T PRK12859 244 ITGQIIHSEGG 254 (256)
T ss_pred ccCcEEEeCCC
Confidence 35777777665
|
|
| >TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.49 E-value=6.4e-13 Score=119.89 Aligned_cols=188 Identities=16% Similarity=0.153 Sum_probs=120.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh---cCCCceeeeccCCCHHHHHHHhc-------CccEE
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALR-------GVRSI 167 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~---~~~~v~~v~~D~~d~~~l~~~~~-------~~d~v 167 (306)
.+++++||||+|+||++++++|+++|++|+++.|+.++..+. .+.++.++.+|+.|.+++.++++ .+|++
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l 83 (262)
T TIGR03325 4 KGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAHGDAVVGVEGDVRSLDDHKEAVARCVAAFGKIDCL 83 (262)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCceEEEEeccCCHHHHHHHHHHHHHHhCCCCEE
Confidence 479999999999999999999999999999999988664332 23467889999999887776664 56999
Q ss_pred EEcCCch-----h--------------------------hhc----ccccCCCEEEEecCcccccCCCCcccccchHHHH
Q 021854 168 ICPSEGF-----I--------------------------SNA----GSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK 212 (306)
Q Consensus 168 i~~~~g~-----~--------------------------~~~----a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~ 212 (306)
||+++.. + .++ ..+.+ .++|++||..++.+......|..+++..
T Consensus 84 i~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-g~iv~~sS~~~~~~~~~~~~Y~~sKaa~ 162 (262)
T TIGR03325 84 IPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVASR-GSVIFTISNAGFYPNGGGPLYTAAKHAV 162 (262)
T ss_pred EECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhcC-CCEEEEeccceecCCCCCchhHHHHHHH
Confidence 9984310 0 000 11222 5799998887766555555565443321
Q ss_pred HHHHHHHHHHh--cCCCEEEEEcCcccCCCCCC------c----ceee----ecCCCCccccCHHHHHHHHHHHhhCCC-
Q 021854 213 LAEQDESMLMA--SGIPYTIIRTGVLQNTPGGK------Q----GFQF----EEGCAANGSLSKEDAAFICVEALESIP- 275 (306)
Q Consensus 213 ~~~~aE~~l~~--sgi~~tiiRPg~l~~~~~~~------~----~~~~----~~g~~~~~~Is~~DVA~~iv~aL~~~~- 275 (306)
.. .++.+-.+ ..+++..|.||++....... . .... ........+.+++|+|.+++.++.++.
T Consensus 163 ~~-l~~~la~e~~~~irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~eva~~~~~l~s~~~~ 241 (262)
T TIGR03325 163 VG-LVKELAFELAPYVRVNGVAPGGMSSDLRGPKSLGMADKSISTVPLGDMLKSVLPIGRMPDAEEYTGAYVFFATRGDT 241 (262)
T ss_pred HH-HHHHHHHhhccCeEEEEEecCCCcCCCccccccccccccccccchhhhhhhcCCCCCCCChHHhhhheeeeecCCCc
Confidence 11 11111111 23899999999965322110 0 0000 000111235678999999999887532
Q ss_pred --CCCcEEEEecCC
Q 021854 276 --QTGLIFEVVNGE 287 (306)
Q Consensus 276 --~~g~~~~v~~g~ 287 (306)
..|+++.+.+|.
T Consensus 242 ~~~tG~~i~vdgg~ 255 (262)
T TIGR03325 242 VPATGAVLNYDGGM 255 (262)
T ss_pred ccccceEEEecCCe
Confidence 367888887653
|
Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase. |
| >PRK06079 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.49 E-value=1.8e-12 Score=116.63 Aligned_cols=187 Identities=11% Similarity=0.038 Sum_probs=120.6
Q ss_pred CCCeEEEEcCC--ChHHHHHHHHHHHCCCeEEEEecCcch---hhhhcCCCceeeeccCCCHHHHHHHhc-------Ccc
Q 021854 98 ARDAVLVTDGD--SDIGQMVILSLIVKRTRIKALVKDKRN---AMESFGTYVESMAGDASNKKFLKTALR-------GVR 165 (306)
Q Consensus 98 ~~~~ilVtGat--G~iG~~l~~~L~~~g~~V~~l~R~~~~---~~~~~~~~v~~v~~D~~d~~~l~~~~~-------~~d 165 (306)
.+|+++||||+ ++||++++++|+++|++|++..|+.+. ..+..+..+.++.+|++|.++++++++ .+|
T Consensus 6 ~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD 85 (252)
T PRK06079 6 SGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQNDRMKKSLQKLVDEEDLLVECDVASDESIERAFATIKERVGKID 85 (252)
T ss_pred CCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCchHHHHHHHhhccCceeEEeCCCCCHHHHHHHHHHHHHHhCCCC
Confidence 47899999999 799999999999999999999987432 112223457789999999888776553 469
Q ss_pred EEEEcCCc--------hh--------------------------hhcccccCCCEEEEecCcccccCCCCcccccchHHH
Q 021854 166 SIICPSEG--------FI--------------------------SNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR 211 (306)
Q Consensus 166 ~vi~~~~g--------~~--------------------------~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~ 211 (306)
++|++++. .+ ..... +-.++|++||..+..+......|..+++.
T Consensus 86 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~--~~g~Iv~iss~~~~~~~~~~~~Y~asKaa 163 (252)
T PRK06079 86 GIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLN--PGASIVTLTYFGSERAIPNYNVMGIAKAA 163 (252)
T ss_pred EEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcc--cCceEEEEeccCccccCCcchhhHHHHHH
Confidence 99987321 00 01111 22689999998776554455556544332
Q ss_pred H--HHHHHHHHHHhcCCCEEEEEcCcccCCCCCC---ccee---eecCCCCccccCHHHHHHHHHHHhhCCC--CCCcEE
Q 021854 212 K--LAEQDESMLMASGIPYTIIRTGVLQNTPGGK---QGFQ---FEEGCAANGSLSKEDAAFICVEALESIP--QTGLIF 281 (306)
Q Consensus 212 ~--~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~---~~~~---~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~~ 281 (306)
. +.+.....+...||++..|.||.+....... .... +........+..++|||+++..++.... -.|+++
T Consensus 164 l~~l~~~la~el~~~gI~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~~~~l~s~~~~~itG~~i 243 (252)
T PRK06079 164 LESSVRYLARDLGKKGIRVNAISAGAVKTLAVTGIKGHKDLLKESDSRTVDGVGVTIEEVGNTAAFLLSDLSTGVTGDII 243 (252)
T ss_pred HHHHHHHHHHHhhhcCcEEEEEecCcccccccccCCChHHHHHHHHhcCcccCCCCHHHHHHHHHHHhCcccccccccEE
Confidence 1 1222222344579999999999875332110 0000 0011112346788999999999997542 457778
Q ss_pred EEecC
Q 021854 282 EVVNG 286 (306)
Q Consensus 282 ~v~~g 286 (306)
.+.+|
T Consensus 244 ~vdgg 248 (252)
T PRK06079 244 YVDKG 248 (252)
T ss_pred EeCCc
Confidence 77765
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.49 E-value=1.7e-12 Score=128.49 Aligned_cols=193 Identities=14% Similarity=0.116 Sum_probs=129.0
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhh---hcCCCceeeeccCCCHHHHHHHhc-------Ccc
Q 021854 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALR-------GVR 165 (306)
Q Consensus 96 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~---~~~~~v~~v~~D~~d~~~l~~~~~-------~~d 165 (306)
...+++++||||+++||++++++|+++|++|+++.|+.++..+ ..+..+..+.+|++|.++++++++ .+|
T Consensus 266 ~~~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id 345 (520)
T PRK06484 266 AESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALGDEHLSVQADITDEAAVESAFAQIQARWGRLD 345 (520)
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 3357999999999999999999999999999999998766432 234466778999999988877664 469
Q ss_pred EEEEcCCch---------------------------hhhcccc--cCCCEEEEecCcccccCCCCcccccchHHHH--HH
Q 021854 166 SIICPSEGF---------------------------ISNAGSL--KGVQHVILLSQLSVYRGSGGIQALMKGNARK--LA 214 (306)
Q Consensus 166 ~vi~~~~g~---------------------------~~~~a~~--~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~--~~ 214 (306)
++||+++.. +...+.. .+-.+||++||..+..+..+...|..+++.. +.
T Consensus 346 ~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaal~~l~ 425 (520)
T PRK06484 346 VLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIASLLALPPRNAYCASKAAVTMLS 425 (520)
T ss_pred EEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhhcCCCCCCchhHHHHHHHHHHH
Confidence 999984310 0011111 2346899999998887766666776544322 11
Q ss_pred HHHHHHHHhcCCCEEEEEcCcccCCCCCC----ccee---eecCCCCccccCHHHHHHHHHHHhhCCC--CCCcEEEEec
Q 021854 215 EQDESMLMASGIPYTIIRTGVLQNTPGGK----QGFQ---FEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVN 285 (306)
Q Consensus 215 ~~aE~~l~~sgi~~tiiRPg~l~~~~~~~----~~~~---~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~~~v~~ 285 (306)
+.....+...+|+++.|+||++....... .... +........+.+++|+|++++.++.... ..|+.+.+.+
T Consensus 426 ~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~s~~~~~~~G~~i~vdg 505 (520)
T PRK06484 426 RSLACEWAPAGIRVNTVAPGYIETPAVLALKASGRADFDSIRRRIPLGRLGDPEEVAEAIAFLASPAASYVNGATLTVDG 505 (520)
T ss_pred HHHHHHhhhhCeEEEEEEeCCccCchhhhhccccHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccCcEEEECC
Confidence 22222244568999999999865322110 0000 0011112235688999999999987543 4688899887
Q ss_pred CCc
Q 021854 286 GEE 288 (306)
Q Consensus 286 g~~ 288 (306)
|..
T Consensus 506 g~~ 508 (520)
T PRK06484 506 GWT 508 (520)
T ss_pred Ccc
Confidence 754
|
|
| >PRK05872 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.49 E-value=1.5e-12 Score=119.90 Aligned_cols=177 Identities=15% Similarity=0.133 Sum_probs=117.0
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhh---hcC--CCceeeeccCCCHHHHHHHhc-------Cc
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFG--TYVESMAGDASNKKFLKTALR-------GV 164 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~---~~~--~~v~~v~~D~~d~~~l~~~~~-------~~ 164 (306)
..+++++||||+|+||++++++|+++|++|+++.|+.+++.+ ..+ ..+..+.+|++|.++++++++ .+
T Consensus 7 l~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 86 (296)
T PRK05872 7 LAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVERFGGI 86 (296)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 357899999999999999999999999999999998876432 222 245556699999988877653 57
Q ss_pred cEEEEcCCch--------------------------hhhc----ccccCCCEEEEecCcccccCCCCcccccchHHHH--
Q 021854 165 RSIICPSEGF--------------------------ISNA----GSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK-- 212 (306)
Q Consensus 165 d~vi~~~~g~--------------------------~~~~----a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~-- 212 (306)
|++||+++.. +.+. +.+ +..+||++||..++.+......|..+++..
T Consensus 87 d~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~-~~g~iv~isS~~~~~~~~~~~~Y~asKaal~~ 165 (296)
T PRK05872 87 DVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIE-RRGYVLQVSSLAAFAAAPGMAAYCASKAGVEA 165 (296)
T ss_pred CEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH-cCCEEEEEeCHhhcCCCCCchHHHHHHHHHHH
Confidence 9999984411 0111 112 236899999998877666666675543321
Q ss_pred HHHHHHHHHHhcCCCEEEEEcCcccCCCCCC--cc-ee---e-e-cCCCCccccCHHHHHHHHHHHhhCC
Q 021854 213 LAEQDESMLMASGIPYTIIRTGVLQNTPGGK--QG-FQ---F-E-EGCAANGSLSKEDAAFICVEALESI 274 (306)
Q Consensus 213 ~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~--~~-~~---~-~-~g~~~~~~Is~~DVA~~iv~aL~~~ 274 (306)
+.+.....+...++.++.++||++....... .. .. + . ........++.+|+|++++.++...
T Consensus 166 ~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~~i~~~~~~~ 235 (296)
T PRK05872 166 FANALRLEVAHHGVTVGSAYLSWIDTDLVRDADADLPAFRELRARLPWPLRRTTSVEKCAAAFVDGIERR 235 (296)
T ss_pred HHHHHHHHHHHHCcEEEEEecCcccchhhhhccccchhHHHHHhhCCCcccCCCCHHHHHHHHHHHHhcC
Confidence 1122222244578999999999864322111 00 00 0 0 0011234678999999999999754
|
|
| >PRK05855 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.49 E-value=1.1e-12 Score=130.64 Aligned_cols=178 Identities=19% Similarity=0.163 Sum_probs=119.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh------cCCCceeeeccCCCHHHHHHHhc-------Cc
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GV 164 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~~~-------~~ 164 (306)
..++++||||+|+||++++++|+++|++|+++.|+.++..+. .+.++.++.+|++|.+++.++++ .+
T Consensus 314 ~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i 393 (582)
T PRK05855 314 SGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEHGVP 393 (582)
T ss_pred CCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence 458999999999999999999999999999999988664321 23467889999999998877765 36
Q ss_pred cEEEEcCCch--------------------------h----hhcccccC-CCEEEEecCcccccCCCCcccccchHHHHH
Q 021854 165 RSIICPSEGF--------------------------I----SNAGSLKG-VQHVILLSQLSVYRGSGGIQALMKGNARKL 213 (306)
Q Consensus 165 d~vi~~~~g~--------------------------~----~~~a~~~g-vkr~V~iSS~~~~~~~~~~~~~~~~~a~~~ 213 (306)
|++||+++-. + ...+.+.+ -.+||++||..++.+..+...|..+++...
T Consensus 394 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sKaa~~ 473 (582)
T PRK05855 394 DIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYAPSRSLPAYATSKAAVL 473 (582)
T ss_pred cEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCCCCCcHHHHHHHHHH
Confidence 9999984310 0 01122233 368999999998887777777765544221
Q ss_pred --HHHHHHHHHhcCCCEEEEEcCcccCCCCCCccee-ee-----------cCCCCccccCHHHHHHHHHHHhhCCC
Q 021854 214 --AEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQ-FE-----------EGCAANGSLSKEDAAFICVEALESIP 275 (306)
Q Consensus 214 --~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~~~~~-~~-----------~g~~~~~~Is~~DVA~~iv~aL~~~~ 275 (306)
.+.....+...||+++.|+||++.........+. .. .........+++|||+.++.++..+.
T Consensus 474 ~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~va~~~~~~~~~~~ 549 (582)
T PRK05855 474 MLSECLRAELAAAGIGVTAICPGFVDTNIVATTRFAGADAEDEARRRGRADKLYQRRGYGPEKVAKAIVDAVKRNK 549 (582)
T ss_pred HHHHHHHHHhcccCcEEEEEEeCCCcccchhccccCCcccchhhhHHhhhhhhccccCCCHHHHHHHHHHHHHcCC
Confidence 1122222445799999999998653221110000 00 00001123588999999999998653
|
|
| >KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.47 E-value=2.1e-12 Score=117.31 Aligned_cols=182 Identities=18% Similarity=0.172 Sum_probs=118.3
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhh-------hhcCCC-ceeeeccCCCHHHHHHHh------
Q 021854 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM-------ESFGTY-VESMAGDASNKKFLKTAL------ 161 (306)
Q Consensus 96 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~-------~~~~~~-v~~v~~D~~d~~~l~~~~------ 161 (306)
...+|.|+||||+++||.+++.+|+++|.+++++.|..++++ +..+.. +.++++|++|.+++++++
T Consensus 9 ~~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~ 88 (282)
T KOG1205|consen 9 RLAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIRH 88 (282)
T ss_pred HhCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHHh
Confidence 345799999999999999999999999999999888886632 223344 899999999998888554
Q ss_pred -cCccEEEEcCC----ch--------------------------hhhcccccCCCEEEEecCcccccCCCCcccccchHH
Q 021854 162 -RGVRSIICPSE----GF--------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA 210 (306)
Q Consensus 162 -~~~d~vi~~~~----g~--------------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a 210 (306)
.++|++|++++ ++ ....+++.+-.|||.+||..+..+.+....|..++.
T Consensus 89 fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~~P~~~~Y~ASK~ 168 (282)
T KOG1205|consen 89 FGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMPLPFRSIYSASKH 168 (282)
T ss_pred cCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccCCCcccccchHHH
Confidence 57899999744 11 112244555689999999999887766667766543
Q ss_pred HH--HHHHHHHHHHhcCCCEE-EEEcCcccCCCCCCcceeeecC-CCCccccCHHHHHH--HHHHHhhCCCCCC
Q 021854 211 RK--LAEQDESMLMASGIPYT-IIRTGVLQNTPGGKQGFQFEEG-CAANGSLSKEDAAF--ICVEALESIPQTG 278 (306)
Q Consensus 211 ~~--~~~~aE~~l~~sgi~~t-iiRPg~l~~~~~~~~~~~~~~g-~~~~~~Is~~DVA~--~iv~aL~~~~~~g 278 (306)
.- +.+-....+...+..+. +|.||++.......... -..+ .........+|++. .++.++..+....
T Consensus 169 Al~~f~etLR~El~~~~~~i~i~V~PG~V~Te~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 241 (282)
T KOG1205|consen 169 ALEGFFETLRQELIPLGTIIIILVSPGPIETEFTGKELL-GEEGKSQQGPFLRTEDVADPEAVAYAISTPPCRQ 241 (282)
T ss_pred HHHHHHHHHHHHhhccCceEEEEEecCceeecccchhhc-cccccccccchhhhhhhhhHHHHHHHHhcCcccc
Confidence 21 11111222333333222 68999876443222111 1111 22234445577755 7888887766443
|
|
| >TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative | Back alignment and domain information |
|---|
Probab=99.47 E-value=2e-12 Score=114.69 Aligned_cols=185 Identities=16% Similarity=0.121 Sum_probs=118.4
Q ss_pred EEEEcCCChHHHHHHHHHHHCCCeEEEEecCcch-hh---h---hcCCCceeeeccCCCHHHHHHHhc-------CccEE
Q 021854 102 VLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-AM---E---SFGTYVESMAGDASNKKFLKTALR-------GVRSI 167 (306)
Q Consensus 102 ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~-~~---~---~~~~~v~~v~~D~~d~~~l~~~~~-------~~d~v 167 (306)
|+||||+|+||.+++++|+++|++|++++|..+. .. + ..+.++.++.+|++|.+++.++++ ..|++
T Consensus 1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~~l 80 (239)
T TIGR01831 1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEHGAYYGV 80 (239)
T ss_pred CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 6899999999999999999999999998876432 11 1 123468899999999988877664 35899
Q ss_pred EEcCCc-----h---------------------hhhcc-----cccCCCEEEEecCcccccCCCCcccccchHHHH--HH
Q 021854 168 ICPSEG-----F---------------------ISNAG-----SLKGVQHVILLSQLSVYRGSGGIQALMKGNARK--LA 214 (306)
Q Consensus 168 i~~~~g-----~---------------------~~~~a-----~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~--~~ 214 (306)
|++++. + +.+++ ++.+.++||++||..+..+......|..+++.. +.
T Consensus 81 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~~~ 160 (239)
T TIGR01831 81 VLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLASVSGVMGNRGQVNYSAAKAGLIGAT 160 (239)
T ss_pred EECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeEEEEEcchhhccCCCCCcchHHHHHHHHHHH
Confidence 987331 0 11111 224557999999987776666666665544321 11
Q ss_pred HHHHHHHHhcCCCEEEEEcCcccCCCCCC-cce--eeecCCCCccccCHHHHHHHHHHHhhCCC--CCCcEEEEecC
Q 021854 215 EQDESMLMASGIPYTIIRTGVLQNTPGGK-QGF--QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVNG 286 (306)
Q Consensus 215 ~~aE~~l~~sgi~~tiiRPg~l~~~~~~~-~~~--~~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~~~v~~g 286 (306)
+.....+...+++++.|+||++....... ... ..........+...+|+|+++..++..+. ..|....+.++
T Consensus 161 ~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~~gg 237 (239)
T TIGR01831 161 KALAVELAKRKITVNCIAPGLIDTEMLAEVEHDLDEALKTVPMNRMGQPAEVASLAGFLMSDGASYVTRQVISVNGG 237 (239)
T ss_pred HHHHHHHhHhCeEEEEEEEccCccccchhhhHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCchhcCccCCEEEecCC
Confidence 22222334568999999999865332111 000 00011111235678999999999987543 34666666554
|
This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found. |
| >PRK08703 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.47 E-value=4.9e-12 Score=112.38 Aligned_cols=181 Identities=12% Similarity=0.037 Sum_probs=114.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhc-------CCCceeeeccCCC--HHHHHHH-------h
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF-------GTYVESMAGDASN--KKFLKTA-------L 161 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~-------~~~v~~v~~D~~d--~~~l~~~-------~ 161 (306)
.+++++||||+|+||++++++|+++|++|+++.|+.++..+.. ...+.++.+|+.| .+++.++ +
T Consensus 5 ~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~~ 84 (239)
T PRK08703 5 SDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEAT 84 (239)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHHh
Confidence 4689999999999999999999999999999999987643221 1346678899875 3334333 3
Q ss_pred -cCccEEEEcCCch-------------------------------hhhcccccCCCEEEEecCcccccCCCCcccccchH
Q 021854 162 -RGVRSIICPSEGF-------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGN 209 (306)
Q Consensus 162 -~~~d~vi~~~~g~-------------------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~ 209 (306)
..+|+|||+++.. +...+.+.+..++|++||..+..+......|..++
T Consensus 85 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK 164 (239)
T PRK08703 85 QGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVGESHGETPKAYWGGFGASK 164 (239)
T ss_pred CCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCCCEEEEEeccccccCCCCccchHHhH
Confidence 4579999884310 01112334567999999987766655555665543
Q ss_pred HHHH--HHHHHHHHHhc-CCCEEEEEcCcccCCCCCCcceeeecCCCCccccCHHHHHHHHHHHhhC--CCCCCcEEE
Q 021854 210 ARKL--AEQDESMLMAS-GIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALES--IPQTGLIFE 282 (306)
Q Consensus 210 a~~~--~~~aE~~l~~s-gi~~tiiRPg~l~~~~~~~~~~~~~~g~~~~~~Is~~DVA~~iv~aL~~--~~~~g~~~~ 282 (306)
+... .+.....+... +++++.|+||++....... .. .+.....+...+|++..+..++.. ....|++..
T Consensus 165 aa~~~~~~~la~e~~~~~~i~v~~v~pG~v~t~~~~~--~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 238 (239)
T PRK08703 165 AALNYLCKVAADEWERFGNLRANVLVPGPINSPQRIK--SH--PGEAKSERKSYGDVLPAFVWWASAESKGRSGEIVY 238 (239)
T ss_pred HHHHHHHHHHHHHhccCCCeEEEEEecCcccCccccc--cC--CCCCccccCCHHHHHHHHHHHhCccccCcCCeEee
Confidence 3211 11111111122 6999999999975432111 10 112223467999999999999973 234455443
|
|
| >PLN02780 ketoreductase/ oxidoreductase | Back alignment and domain information |
|---|
Probab=99.46 E-value=2e-12 Score=120.73 Aligned_cols=168 Identities=13% Similarity=0.038 Sum_probs=110.9
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh-------cC-CCceeeeccCCC--HHH---HHHHhcCc-
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------FG-TYVESMAGDASN--KKF---LKTALRGV- 164 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~-------~~-~~v~~v~~D~~d--~~~---l~~~~~~~- 164 (306)
+++++||||+|+||++++++|+++|++|+++.|+++++++. .+ .++..+.+|+++ .+. +.+.+.+.
T Consensus 53 g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~~d 132 (320)
T PLN02780 53 GSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIEGLD 132 (320)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhcCCC
Confidence 68999999999999999999999999999999998764321 12 356778899985 233 34445544
Q ss_pred -cEEEEcCCc------h--------------------------hhhcccccCCCEEEEecCccccc-C-CCCcccccchH
Q 021854 165 -RSIICPSEG------F--------------------------ISNAGSLKGVQHVILLSQLSVYR-G-SGGIQALMKGN 209 (306)
Q Consensus 165 -d~vi~~~~g------~--------------------------~~~~a~~~gvkr~V~iSS~~~~~-~-~~~~~~~~~~~ 209 (306)
|++|++++- . +...+.+.+.+++|++||..++. + .+....|..++
T Consensus 133 idilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~p~~~~Y~aSK 212 (320)
T PLN02780 133 VGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIINIGSGAAIVIPSDPLYAVYAATK 212 (320)
T ss_pred ccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCCCCccchHHHHHH
Confidence 588887321 1 01113345678999999987753 2 23445565544
Q ss_pred HHH--HHHHHHHHHHhcCCCEEEEEcCcccCCCCCCcceeeecCCCCccccCHHHHHHHHHHHhhC
Q 021854 210 ARK--LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALES 273 (306)
Q Consensus 210 a~~--~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~~~~~~~~g~~~~~~Is~~DVA~~iv~aL~~ 273 (306)
+.. +.+.....+...|++++.|+||++........ .......+++++|+.++..+..
T Consensus 213 aal~~~~~~L~~El~~~gI~V~~v~PG~v~T~~~~~~-------~~~~~~~~p~~~A~~~~~~~~~ 271 (320)
T PLN02780 213 AYIDQFSRCLYVEYKKSGIDVQCQVPLYVATKMASIR-------RSSFLVPSSDGYARAALRWVGY 271 (320)
T ss_pred HHHHHHHHHHHHHHhccCeEEEEEeeCceecCccccc-------CCCCCCCCHHHHHHHHHHHhCC
Confidence 322 22222333456799999999998754332211 0111246899999999999964
|
|
| >PRK12744 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.46 E-value=5.1e-12 Score=113.63 Aligned_cols=189 Identities=14% Similarity=0.122 Sum_probs=114.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcch----hhh------hcCCCceeeeccCCCHHHHHHHhc-----
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN----AME------SFGTYVESMAGDASNKKFLKTALR----- 162 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~----~~~------~~~~~v~~v~~D~~d~~~l~~~~~----- 162 (306)
++++++||||+|+||.+++++|+++|++|+++.++.+. ..+ ..+.++.++.+|++|.++++++++
T Consensus 7 ~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 86 (257)
T PRK12744 7 KGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDAKAA 86 (257)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHHHHh
Confidence 46899999999999999999999999997777654321 111 123467889999999998887765
Q ss_pred --CccEEEEcCCch--------------------------hhhcccc--cCCCEEEEe-cCcccccCCCCcccccchHHH
Q 021854 163 --GVRSIICPSEGF--------------------------ISNAGSL--KGVQHVILL-SQLSVYRGSGGIQALMKGNAR 211 (306)
Q Consensus 163 --~~d~vi~~~~g~--------------------------~~~~a~~--~gvkr~V~i-SS~~~~~~~~~~~~~~~~~a~ 211 (306)
.+|++||+++.. +..++.. ....+++++ ||... ........|..+++.
T Consensus 87 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~iv~~~ss~~~-~~~~~~~~Y~~sK~a 165 (257)
T PRK12744 87 FGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDNGKIVTLVTSLLG-AFTPFYSAYAGSKAP 165 (257)
T ss_pred hCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCEEEEecchhc-ccCCCcccchhhHHH
Confidence 469999984420 0111111 112467765 44322 222334455544332
Q ss_pred H--HHHHHHHHHHhcCCCEEEEEcCcccCCCC----CCcceee----ecCC--CCccccCHHHHHHHHHHHhhCCC-CCC
Q 021854 212 K--LAEQDESMLMASGIPYTIIRTGVLQNTPG----GKQGFQF----EEGC--AANGSLSKEDAAFICVEALESIP-QTG 278 (306)
Q Consensus 212 ~--~~~~aE~~l~~sgi~~tiiRPg~l~~~~~----~~~~~~~----~~g~--~~~~~Is~~DVA~~iv~aL~~~~-~~g 278 (306)
. +.+.....+...+++++.++||++..... ....... .... ....+.+++|+|.++..++.... ..|
T Consensus 166 ~~~~~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~g 245 (257)
T PRK12744 166 VEHFTRAASKEFGARGISVTAVGPGPMDTPFFYPQEGAEAVAYHKTAAALSPFSKTGLTDIEDIVPFIRFLVTDGWWITG 245 (257)
T ss_pred HHHHHHHHHHHhCcCceEEEEEecCccccchhccccccchhhcccccccccccccCCCCCHHHHHHHHHHhhcccceeec
Confidence 1 11111122233589999999999753211 0000000 0011 11256789999999999998532 257
Q ss_pred cEEEEecCC
Q 021854 279 LIFEVVNGE 287 (306)
Q Consensus 279 ~~~~v~~g~ 287 (306)
+++.+.+|.
T Consensus 246 ~~~~~~gg~ 254 (257)
T PRK12744 246 QTILINGGY 254 (257)
T ss_pred ceEeecCCc
Confidence 889888764
|
|
| >PRK07791 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.46 E-value=2.6e-12 Score=117.88 Aligned_cols=190 Identities=16% Similarity=0.107 Sum_probs=121.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCc---------chhhh---h---cCCCceeeeccCCCHHHHHHHhc
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK---------RNAME---S---FGTYVESMAGDASNKKFLKTALR 162 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~---------~~~~~---~---~~~~v~~v~~D~~d~~~l~~~~~ 162 (306)
++++++||||+++||++++++|+++|++|+++.|+. ++..+ . .+.++.++.+|++|.+++.++++
T Consensus 5 ~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~ 84 (286)
T PRK07791 5 DGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANLVD 84 (286)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHHHH
Confidence 478999999999999999999999999999988765 32211 1 13457788999999888776553
Q ss_pred -------CccEEEEcCCch--------------------------hhhc----cccc---C---CCEEEEecCcccccCC
Q 021854 163 -------GVRSIICPSEGF--------------------------ISNA----GSLK---G---VQHVILLSQLSVYRGS 199 (306)
Q Consensus 163 -------~~d~vi~~~~g~--------------------------~~~~----a~~~---g---vkr~V~iSS~~~~~~~ 199 (306)
.+|++||+++-. +..+ +.+. + ..+||++||..+..+.
T Consensus 85 ~~~~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~ 164 (286)
T PRK07791 85 AAVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAGLQGS 164 (286)
T ss_pred HHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCchhhCcCC
Confidence 469999984310 0011 1111 1 2589999998877766
Q ss_pred CCcccccchHHHH--HHHHHHHHHHhcCCCEEEEEcCcccCCCCCCc-ceeee-cCCCCccccCHHHHHHHHHHHhhCCC
Q 021854 200 GGIQALMKGNARK--LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQ-GFQFE-EGCAANGSLSKEDAAFICVEALESIP 275 (306)
Q Consensus 200 ~~~~~~~~~~a~~--~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~~-~~~~~-~g~~~~~~Is~~DVA~~iv~aL~~~~ 275 (306)
.+...|..+++.. +.+.....+...+|+++.|.||. ........ ..... .........+++|+|.++++++....
T Consensus 165 ~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~Pg~-~T~~~~~~~~~~~~~~~~~~~~~~~pedva~~~~~L~s~~~ 243 (286)
T PRK07791 165 VGQGNYSAAKAGIAALTLVAAAELGRYGVTVNAIAPAA-RTRMTETVFAEMMAKPEEGEFDAMAPENVSPLVVWLGSAES 243 (286)
T ss_pred CCchhhHHHHHHHHHHHHHHHHHHHHhCeEEEEECCCC-CCCcchhhHHHHHhcCcccccCCCCHHHHHHHHHHHhCchh
Confidence 6666676544322 11222233445799999999983 21111000 00000 01111135689999999999886532
Q ss_pred --CCCcEEEEecCCc
Q 021854 276 --QTGLIFEVVNGEE 288 (306)
Q Consensus 276 --~~g~~~~v~~g~~ 288 (306)
..|+.+.+.+|..
T Consensus 244 ~~itG~~i~vdgG~~ 258 (286)
T PRK07791 244 RDVTGKVFEVEGGKI 258 (286)
T ss_pred cCCCCcEEEEcCCce
Confidence 4678888887654
|
|
| >PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.46 E-value=5e-12 Score=112.90 Aligned_cols=183 Identities=11% Similarity=0.076 Sum_probs=116.6
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh-------cCCCceeeeccCC--CHHHHHH-------H
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------FGTYVESMAGDAS--NKKFLKT-------A 160 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~-------~~~~v~~v~~D~~--d~~~l~~-------~ 160 (306)
..+++|+||||+|+||.+++++|++.|++|+++.|+.++.... ...++.++.+|+. +.+.+.+ .
T Consensus 10 ~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 89 (247)
T PRK08945 10 LKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIEEQ 89 (247)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHHHH
Confidence 3579999999999999999999999999999999988653221 1235677788886 5544433 3
Q ss_pred hcCccEEEEcCCch---------------------------hhh----cccccCCCEEEEecCcccccCCCCcccccchH
Q 021854 161 LRGVRSIICPSEGF---------------------------ISN----AGSLKGVQHVILLSQLSVYRGSGGIQALMKGN 209 (306)
Q Consensus 161 ~~~~d~vi~~~~g~---------------------------~~~----~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~ 209 (306)
+..+|+|||+++.. +.+ .+.+.+.++||++||..+..+......|..++
T Consensus 90 ~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK 169 (247)
T PRK08945 90 FGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSSSVGRQGRANWGAYAVSK 169 (247)
T ss_pred hCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEEccHhhcCCCCCCcccHHHH
Confidence 34679999984310 011 12345678999999987766555555665443
Q ss_pred HHHH--HHHHHHHHHhcCCCEEEEEcCcccCCCCCCcceeeecCCCCccccCHHHHHHHHHHHhhCCC--CCCcEEEE
Q 021854 210 ARKL--AEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEV 283 (306)
Q Consensus 210 a~~~--~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~~~~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~~~v 283 (306)
+... .+.....+...+++++.++||.+....... . + .......+..++|+|..+..++.++. ..|+++..
T Consensus 170 ~a~~~~~~~~~~~~~~~~i~~~~v~pg~v~t~~~~~--~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 243 (247)
T PRK08945 170 FATEGMMQVLADEYQGTNLRVNCINPGGTRTAMRAS--A-F-PGEDPQKLKTPEDIMPLYLYLMGDDSRRKNGQSFDA 243 (247)
T ss_pred HHHHHHHHHHHHHhcccCEEEEEEecCCccCcchhh--h-c-CcccccCCCCHHHHHHHHHHHhCccccccCCeEEeC
Confidence 2211 111111122357999999999875332111 0 1 11112357889999999999886543 34555443
|
|
| >PRK05599 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.46 E-value=4.2e-12 Score=113.79 Aligned_cols=177 Identities=15% Similarity=0.128 Sum_probs=117.0
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh------cC-CCceeeeccCCCHHHHHHHhc-------Ccc
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FG-TYVESMAGDASNKKFLKTALR-------GVR 165 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~------~~-~~v~~v~~D~~d~~~l~~~~~-------~~d 165 (306)
|+++||||+++||++++++|+ +|++|+++.|+.+++++. .+ ..+.++.+|++|.++++++++ .+|
T Consensus 1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id 79 (246)
T PRK05599 1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGEIS 79 (246)
T ss_pred CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCCCC
Confidence 579999999999999999998 599999999988764321 12 247789999999888776543 469
Q ss_pred EEEEcCCch------------------------------hhhcccccC-CCEEEEecCcccccCCCCcccccchHHHH--
Q 021854 166 SIICPSEGF------------------------------ISNAGSLKG-VQHVILLSQLSVYRGSGGIQALMKGNARK-- 212 (306)
Q Consensus 166 ~vi~~~~g~------------------------------~~~~a~~~g-vkr~V~iSS~~~~~~~~~~~~~~~~~a~~-- 212 (306)
++|++++-. +...+.+.+ -.++|++||..+..+......|..+++..
T Consensus 80 ~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~ 159 (246)
T PRK05599 80 LAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGWRARRANYVYGSTKAGLDA 159 (246)
T ss_pred EEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEeccccccCCcCCcchhhHHHHHHH
Confidence 999873310 001122222 46899999988776665666676554322
Q ss_pred HHHHHHHHHHhcCCCEEEEEcCcccCCCCCCcceeeecCCCCccccCHHHHHHHHHHHhhCCCCCCcEEEEec
Q 021854 213 LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVVN 285 (306)
Q Consensus 213 ~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~~~~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~~~g~~~~v~~ 285 (306)
+.+.....+...++.++.+.||++......... ......+++|+|+.++.++..... ...+.+..
T Consensus 160 ~~~~la~el~~~~I~v~~v~PG~v~T~~~~~~~-------~~~~~~~pe~~a~~~~~~~~~~~~-~~~~~~~~ 224 (246)
T PRK05599 160 FCQGLADSLHGSHVRLIIARPGFVIGSMTTGMK-------PAPMSVYPRDVAAAVVSAITSSKR-STTLWIPG 224 (246)
T ss_pred HHHHHHHHhcCCCceEEEecCCcccchhhcCCC-------CCCCCCCHHHHHHHHHHHHhcCCC-CceEEeCc
Confidence 112222234457899999999987543211100 001136889999999999987543 33455543
|
|
| >PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.46 E-value=5e-12 Score=117.16 Aligned_cols=190 Identities=14% Similarity=0.088 Sum_probs=118.4
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcc-hhh---h---hcCCCceeeeccCCCHHHHHHHhc------C
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR-NAM---E---SFGTYVESMAGDASNKKFLKTALR------G 163 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~-~~~---~---~~~~~v~~v~~D~~d~~~l~~~~~------~ 163 (306)
..+++++||||+|+||++++++|+++|++|++..|... ... + ..+.++.++.+|++|.+.+.++++ .
T Consensus 10 l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~~g~ 89 (306)
T PRK07792 10 LSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVGLGG 89 (306)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHhCC
Confidence 45799999999999999999999999999999887542 211 1 123467889999999888877664 5
Q ss_pred ccEEEEcCCch--------------------------hhhcc----ccc-------CCCEEEEecCcccccCCCCccccc
Q 021854 164 VRSIICPSEGF--------------------------ISNAG----SLK-------GVQHVILLSQLSVYRGSGGIQALM 206 (306)
Q Consensus 164 ~d~vi~~~~g~--------------------------~~~~a----~~~-------gvkr~V~iSS~~~~~~~~~~~~~~ 206 (306)
+|++||+++.. +.+++ ... ...++|++||..+..+......|.
T Consensus 90 iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~ 169 (306)
T PRK07792 90 LDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLVGPVGQANYG 169 (306)
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCcccccCCCCCchHH
Confidence 79999984310 11111 110 125899999988766555555665
Q ss_pred chHHHHH--HHHHHHHHHhcCCCEEEEEcCcccCCCCCCcceeeecCCCCccccCHHHHHHHHHHHhhCCC--CCCcEEE
Q 021854 207 KGNARKL--AEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFE 282 (306)
Q Consensus 207 ~~~a~~~--~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~~~~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~~~ 282 (306)
.+++... .+.....+...||++..|.||......................+++++|||.+++.++.... ..|++|.
T Consensus 170 asKaal~~l~~~la~e~~~~gI~vn~i~Pg~~t~~~~~~~~~~~~~~~~~~~~~~pe~va~~v~~L~s~~~~~~tG~~~~ 249 (306)
T PRK07792 170 AAKAGITALTLSAARALGRYGVRANAICPRARTAMTADVFGDAPDVEAGGIDPLSPEHVVPLVQFLASPAAAEVNGQVFI 249 (306)
T ss_pred HHHHHHHHHHHHHHHHhhhcCeEEEEECCCCCCchhhhhccccchhhhhccCCCCHHHHHHHHHHHcCccccCCCCCEEE
Confidence 5433211 11111223457899999999852211100000000000112345789999999999886532 4567777
Q ss_pred EecC
Q 021854 283 VVNG 286 (306)
Q Consensus 283 v~~g 286 (306)
+.++
T Consensus 250 v~gg 253 (306)
T PRK07792 250 VYGP 253 (306)
T ss_pred EcCC
Confidence 7653
|
|
| >PRK07578 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.46 E-value=2.2e-12 Score=111.61 Aligned_cols=165 Identities=16% Similarity=0.220 Sum_probs=111.3
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhc---CccEEEEcCCch--
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR---GVRSIICPSEGF-- 174 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~---~~d~vi~~~~g~-- 174 (306)
|+++||||+|+||++++++|+++ ++|+++.|+.. .+.+|++|.++++++++ ++|++|++++..
T Consensus 1 ~~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~-----------~~~~D~~~~~~~~~~~~~~~~id~lv~~ag~~~~ 68 (199)
T PRK07578 1 MKILVIGASGTIGRAVVAELSKR-HEVITAGRSSG-----------DVQVDITDPASIRALFEKVGKVDAVVSAAGKVHF 68 (199)
T ss_pred CeEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC-----------ceEecCCChHHHHHHHHhcCCCCEEEECCCCCCC
Confidence 47999999999999999999999 99999998763 36789999999888776 579999984310
Q ss_pred ------------------------hhhcccc--cCCCEEEEecCcccccCCCCcccccchHHHH--HHHHHHHHHHhcCC
Q 021854 175 ------------------------ISNAGSL--KGVQHVILLSQLSVYRGSGGIQALMKGNARK--LAEQDESMLMASGI 226 (306)
Q Consensus 175 ------------------------~~~~a~~--~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~--~~~~aE~~l~~sgi 226 (306)
+.+++.. .+..+||++||..+..+......|..+++.. +.+.....+ ..++
T Consensus 69 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~-~~gi 147 (199)
T PRK07578 69 APLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTSGILSDEPIPGGASAATVNGALEGFVKAAALEL-PRGI 147 (199)
T ss_pred CchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcccccCCCCCCchHHHHHHHHHHHHHHHHHHHc-cCCe
Confidence 0111111 1336799999988766555555565443321 111111112 5689
Q ss_pred CEEEEEcCcccCCCCCCcceeeecCCCCccccCHHHHHHHHHHHhhCCCCCCcEEEE
Q 021854 227 PYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEV 283 (306)
Q Consensus 227 ~~tiiRPg~l~~~~~~~~~~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~~~g~~~~v 283 (306)
+++.|+||++.......... + ....+++++|+|+.+..++.. ...|++|++
T Consensus 148 ~v~~i~Pg~v~t~~~~~~~~-~----~~~~~~~~~~~a~~~~~~~~~-~~~g~~~~~ 198 (199)
T PRK07578 148 RINVVSPTVLTESLEKYGPF-F----PGFEPVPAARVALAYVRSVEG-AQTGEVYKV 198 (199)
T ss_pred EEEEEcCCcccCchhhhhhc-C----CCCCCCCHHHHHHHHHHHhcc-ceeeEEecc
Confidence 99999999875432211111 1 113468999999999999875 355677764
|
|
| >PRK12367 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.44 E-value=7.3e-12 Score=112.62 Aligned_cols=166 Identities=8% Similarity=-0.014 Sum_probs=106.2
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcch-hhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcCCch-
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-AMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEGF- 174 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~-~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~g~- 174 (306)
.++++++||||+|+||++++++|+++|++|+++.|+... ...........+.+|++|.+++.+.+..+|++||+++..
T Consensus 12 l~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~iDilVnnAG~~~ 91 (245)
T PRK12367 12 WQGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSESNDESPNEWIKWECGKEESLDKQLASLDVLILNHGINP 91 (245)
T ss_pred hCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhhhccCCCeEEEeeCCCHHHHHHhcCCCCEEEECCccCC
Confidence 356899999999999999999999999999999998732 221111223578899999999999999999999984310
Q ss_pred ----------------------hhh----ccccc---CCCEEEEecCcccccCCCCcccccchHHHHH--HHHHHH---H
Q 021854 175 ----------------------ISN----AGSLK---GVQHVILLSQLSVYRGSGGIQALMKGNARKL--AEQDES---M 220 (306)
Q Consensus 175 ----------------------~~~----~a~~~---gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~~--~~~aE~---~ 220 (306)
+.+ .+.+. +-+.++..||.+...+. ....|..+++... ....+. .
T Consensus 92 ~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~g~~iiv~ss~a~~~~~-~~~~Y~aSKaal~~~~~l~~~l~~e 170 (245)
T PRK12367 92 GGRQDPENINKALEINALSSWRLLELFEDIALNNNSQIPKEIWVNTSEAEIQPA-LSPSYEISKRLIGQLVSLKKNLLDK 170 (245)
T ss_pred cCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccCCCeEEEEEecccccCCC-CCchhHHHHHHHHHHHHHHHHHHHh
Confidence 111 12221 12234444554443332 3344655444321 111111 1
Q ss_pred HHhcCCCEEEEEcCcccCCCCCCcceeeecCCCCccccCHHHHHHHHHHHhhCCC
Q 021854 221 LMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIP 275 (306)
Q Consensus 221 l~~sgi~~tiiRPg~l~~~~~~~~~~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~ 275 (306)
+...++.++.+.||.+..... ....++++|+|+.++.++.+..
T Consensus 171 ~~~~~i~v~~~~pg~~~t~~~------------~~~~~~~~~vA~~i~~~~~~~~ 213 (245)
T PRK12367 171 NERKKLIIRKLILGPFRSELN------------PIGIMSADFVAKQILDQANLGL 213 (245)
T ss_pred hcccccEEEEecCCCcccccC------------ccCCCCHHHHHHHHHHHHhcCC
Confidence 234688889999988632211 1135789999999999997654
|
|
| >KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.43 E-value=3e-12 Score=114.45 Aligned_cols=203 Identities=20% Similarity=0.218 Sum_probs=136.1
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCC--CeEEEEe-----cCcchhhh-hcCCCceeeeccCCCHHHHHHHhc--CccEEEE
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVKR--TRIKALV-----KDKRNAME-SFGTYVESMAGDASNKKFLKTALR--GVRSIIC 169 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~g--~~V~~l~-----R~~~~~~~-~~~~~v~~v~~D~~d~~~l~~~~~--~~d~vi~ 169 (306)
++++|||+.||||+..+..+...= ++.+.+. -+...+++ ...++.+++.+|+.|...+...+. ..|.|+|
T Consensus 7 ~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~~~~l~~~~n~p~ykfv~~di~~~~~~~~~~~~~~id~vih 86 (331)
T KOG0747|consen 7 KNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSNLKNLEPVRNSPNYKFVEGDIADADLVLYLFETEEIDTVIH 86 (331)
T ss_pred ceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccccchhhhhccCCCceEeeccccchHHHHhhhccCchhhhhh
Confidence 899999999999999999998753 4544432 22111211 233689999999999888887775 5699988
Q ss_pred cCCch----------------------hhhccccc-CCCEEEEecCcccccCCCCccc------ccc-hHHHHHHHHHHH
Q 021854 170 PSEGF----------------------ISNAGSLK-GVQHVILLSQLSVYRGSGGIQA------LMK-GNARKLAEQDES 219 (306)
Q Consensus 170 ~~~g~----------------------~~~~a~~~-gvkr~V~iSS~~~~~~~~~~~~------~~~-~~a~~~~~~aE~ 219 (306)
.++.. +.+++... ++++||++||..+|+.+..-.. ..+ ..+.+.|.++|.
T Consensus 87 faa~t~vd~s~~~~~~~~~nnil~t~~Lle~~~~sg~i~~fvhvSTdeVYGds~~~~~~~E~s~~nPtnpyAasKaAaE~ 166 (331)
T KOG0747|consen 87 FAAQTHVDRSFGDSFEFTKNNILSTHVLLEAVRVSGNIRRFVHVSTDEVYGDSDEDAVVGEASLLNPTNPYAASKAAAEM 166 (331)
T ss_pred hHhhhhhhhhcCchHHHhcCCchhhhhHHHHHHhccCeeEEEEecccceecCccccccccccccCCCCCchHHHHHHHHH
Confidence 73311 33444444 7999999999999874322110 001 112333556677
Q ss_pred HHHh----cCCCEEEEEcCcccCCCC---------------CCcceeeecCCCCccccCHHHHHHHHHHHhhCCCCCCcE
Q 021854 220 MLMA----SGIPYTIIRTGVLQNTPG---------------GKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLI 280 (306)
Q Consensus 220 ~l~~----sgi~~tiiRPg~l~~~~~---------------~~~~~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~~~g~~ 280 (306)
.+++ .+++++++|-+.+..... .......+.|....++++++|+++++-.+++. ...|++
T Consensus 167 ~v~Sy~~sy~lpvv~~R~nnVYGP~q~~~klipkFi~l~~~~~~~~i~g~g~~~rs~l~veD~~ea~~~v~~K-g~~geI 245 (331)
T KOG0747|consen 167 LVRSYGRSYGLPVVTTRMNNVYGPNQYPEKLIPKFIKLAMRGKEYPIHGDGLQTRSYLYVEDVSEAFKAVLEK-GELGEI 245 (331)
T ss_pred HHHHHhhccCCcEEEEeccCccCCCcChHHHhHHHHHHHHhCCCcceecCcccceeeEeHHHHHHHHHHHHhc-CCccce
Confidence 7664 689999999888553221 11222234566668899999999999999987 556899
Q ss_pred EEEecCC-cCHHHHHHHHHHHhhh
Q 021854 281 FEVVNGE-EKVSDWKKCFSRLMEK 303 (306)
Q Consensus 281 ~~v~~g~-~s~~d~~~l~~~l~~~ 303 (306)
||++... ....|+++.+.++.++
T Consensus 246 YNIgtd~e~~~~~l~k~i~eli~~ 269 (331)
T KOG0747|consen 246 YNIGTDDEMRVIDLAKDICELFEK 269 (331)
T ss_pred eeccCcchhhHHHHHHHHHHHHHH
Confidence 9999844 4666666666555544
|
|
| >PRK08415 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.43 E-value=5.2e-12 Score=115.33 Aligned_cols=187 Identities=14% Similarity=0.063 Sum_probs=119.3
Q ss_pred CCCeEEEEcCC--ChHHHHHHHHHHHCCCeEEEEecCcc---hhh---hhcCCCceeeeccCCCHHHHHHHhc-------
Q 021854 98 ARDAVLVTDGD--SDIGQMVILSLIVKRTRIKALVKDKR---NAM---ESFGTYVESMAGDASNKKFLKTALR------- 162 (306)
Q Consensus 98 ~~~~ilVtGat--G~iG~~l~~~L~~~g~~V~~l~R~~~---~~~---~~~~~~v~~v~~D~~d~~~l~~~~~------- 162 (306)
.+|+++||||+ ++||++++++|++.|++|++..|+.+ ... +..+.. .++.+|++|.++++++++
T Consensus 4 ~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~~~~~~~~~~~~~~-~~~~~Dv~d~~~v~~~~~~i~~~~g 82 (274)
T PRK08415 4 KGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQELGSD-YVYELDVSKPEHFKSLAESLKKDLG 82 (274)
T ss_pred CCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCc-eEEEecCCCHHHHHHHHHHHHHHcC
Confidence 47999999997 79999999999999999999988752 222 122323 578999999988776653
Q ss_pred CccEEEEcCCc--------h--------------------------hhhcccccCCCEEEEecCcccccCCCCcccccch
Q 021854 163 GVRSIICPSEG--------F--------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKG 208 (306)
Q Consensus 163 ~~d~vi~~~~g--------~--------------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~ 208 (306)
.+|++|++++. . +...+.+ -.++|++||.++..+......|..+
T Consensus 83 ~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~--~g~Iv~isS~~~~~~~~~~~~Y~as 160 (274)
T PRK08415 83 KIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLND--GASVLTLSYLGGVKYVPHYNVMGVA 160 (274)
T ss_pred CCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhcc--CCcEEEEecCCCccCCCcchhhhhH
Confidence 46999988431 0 0011222 2589999998776554444556554
Q ss_pred HHHH--HHHHHHHHHHhcCCCEEEEEcCcccCCCCCC-cce----eee-cCCCCccccCHHHHHHHHHHHhhCCC--CCC
Q 021854 209 NARK--LAEQDESMLMASGIPYTIIRTGVLQNTPGGK-QGF----QFE-EGCAANGSLSKEDAAFICVEALESIP--QTG 278 (306)
Q Consensus 209 ~a~~--~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~-~~~----~~~-~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g 278 (306)
++.- +.+.....+...|+++..|.||++....... ... .+. .......+..++|||.++++++.... ..|
T Consensus 161 Kaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~r~~~pedva~~v~fL~s~~~~~itG 240 (274)
T PRK08415 161 KAALESSVRYLAVDLGKKGIRVNAISAGPIKTLAASGIGDFRMILKWNEINAPLKKNVSIEEVGNSGMYLLSDLSSGVTG 240 (274)
T ss_pred HHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHhccchhhHHhhhhhhhCchhccCCHHHHHHHHHHHhhhhhhcccc
Confidence 3321 2222222344578999999999865321100 000 000 00111335788999999999997542 467
Q ss_pred cEEEEecCC
Q 021854 279 LIFEVVNGE 287 (306)
Q Consensus 279 ~~~~v~~g~ 287 (306)
+++.+.+|.
T Consensus 241 ~~i~vdGG~ 249 (274)
T PRK08415 241 EIHYVDAGY 249 (274)
T ss_pred cEEEEcCcc
Confidence 788887663
|
|
| >PRK05884 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.43 E-value=5.3e-12 Score=111.64 Aligned_cols=174 Identities=14% Similarity=0.125 Sum_probs=115.7
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcC-CCceeeeccCCCHHHHHHHhc----CccEEEEcCCc-
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG-TYVESMAGDASNKKFLKTALR----GVRSIICPSEG- 173 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~-~~v~~v~~D~~d~~~l~~~~~----~~d~vi~~~~g- 173 (306)
|+++||||+|+||++++++|+++|++|+++.|+.++..+... .++.++.+|++|.++++++++ .+|++||+++.
T Consensus 1 m~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~id~lv~~ag~~ 80 (223)
T PRK05884 1 VEVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKELDVDAIVCDNTDPASLEEARGLFPHHLDTIVNVPAPS 80 (223)
T ss_pred CeEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCcEEecCCCCHHHHHHHHHHHhhcCcEEEECCCcc
Confidence 479999999999999999999999999999999876543221 246788999999999888775 57999987320
Q ss_pred ---------hhh-------------------------hcccccCCCEEEEecCcccccCCCCcccccchHHHH--HHHHH
Q 021854 174 ---------FIS-------------------------NAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK--LAEQD 217 (306)
Q Consensus 174 ---------~~~-------------------------~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~--~~~~a 217 (306)
.+. ..++ .-.++|++||... .....|..+++.. +.+..
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~--~~g~Iv~isS~~~----~~~~~Y~asKaal~~~~~~l 154 (223)
T PRK05884 81 WDAGDPRTYSLADTANAWRNALDATVLSAVLTVQSVGDHLR--SGGSIISVVPENP----PAGSAEAAIKAALSNWTAGQ 154 (223)
T ss_pred ccCCCCcccchhcCHHHHHHHHHHHHHHHHHHHHHHHHHhh--cCCeEEEEecCCC----CCccccHHHHHHHHHHHHHH
Confidence 000 0011 2268999998752 1223454443321 22222
Q ss_pred HHHHHhcCCCEEEEEcCcccCCCCCCcceeeecCCCCccccCHHHHHHHHHHHhhCCC--CCCcEEEEecCC
Q 021854 218 ESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVNGE 287 (306)
Q Consensus 218 E~~l~~sgi~~tiiRPg~l~~~~~~~~~~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~~~v~~g~ 287 (306)
...+...+++++.|.||++...... ... . ...-.++|+|+.+..++..+. -.|+++.+.+|.
T Consensus 155 a~e~~~~gI~v~~v~PG~v~t~~~~--~~~----~--~p~~~~~~ia~~~~~l~s~~~~~v~G~~i~vdgg~ 218 (223)
T PRK05884 155 AAVFGTRGITINAVACGRSVQPGYD--GLS----R--TPPPVAAEIARLALFLTTPAARHITGQTLHVSHGA 218 (223)
T ss_pred HHHhhhcCeEEEEEecCccCchhhh--hcc----C--CCCCCHHHHHHHHHHHcCchhhccCCcEEEeCCCe
Confidence 2334457899999999986532111 000 0 112378999999999887543 357888887664
|
|
| >PRK06505 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.43 E-value=9.5e-12 Score=113.35 Aligned_cols=188 Identities=11% Similarity=0.047 Sum_probs=119.9
Q ss_pred cCCCeEEEEcCCC--hHHHHHHHHHHHCCCeEEEEecCcch---hhhh---cCCCceeeeccCCCHHHHHHHhc------
Q 021854 97 EARDAVLVTDGDS--DIGQMVILSLIVKRTRIKALVKDKRN---AMES---FGTYVESMAGDASNKKFLKTALR------ 162 (306)
Q Consensus 97 ~~~~~ilVtGatG--~iG~~l~~~L~~~g~~V~~l~R~~~~---~~~~---~~~~v~~v~~D~~d~~~l~~~~~------ 162 (306)
.++|+++||||++ +||++++++|+++|++|++..|+.+. ..+. .+ ....+.+|++|.++++++++
T Consensus 5 l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~g-~~~~~~~Dv~d~~~v~~~~~~~~~~~ 83 (271)
T PRK06505 5 MQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPLAESLG-SDFVLPCDVEDIASVDAVFEALEKKW 83 (271)
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHHHHHHHHhcC-CceEEeCCCCCHHHHHHHHHHHHHHh
Confidence 3578999999996 99999999999999999999887532 1111 12 23468899999988776653
Q ss_pred -CccEEEEcCCc--------hh--------------------------hhcccccCCCEEEEecCcccccCCCCcccccc
Q 021854 163 -GVRSIICPSEG--------FI--------------------------SNAGSLKGVQHVILLSQLSVYRGSGGIQALMK 207 (306)
Q Consensus 163 -~~d~vi~~~~g--------~~--------------------------~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~ 207 (306)
.+|++|++++. .+ ...+. .+ .++|++||..+..+......|..
T Consensus 84 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~-~~-G~Iv~isS~~~~~~~~~~~~Y~a 161 (271)
T PRK06505 84 GKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMP-DG-GSMLTLTYGGSTRVMPNYNVMGV 161 (271)
T ss_pred CCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhc-cC-ceEEEEcCCCccccCCccchhhh
Confidence 46999988331 10 01112 22 68999999877655444555655
Q ss_pred hHHHH--HHHHHHHHHHhcCCCEEEEEcCcccCCCCCC--cc--e--eeecCCCCccccCHHHHHHHHHHHhhCCC--CC
Q 021854 208 GNARK--LAEQDESMLMASGIPYTIIRTGVLQNTPGGK--QG--F--QFEEGCAANGSLSKEDAAFICVEALESIP--QT 277 (306)
Q Consensus 208 ~~a~~--~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~--~~--~--~~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~ 277 (306)
+++.- +.+.....+...||+++.|.||++....... .. . ..........+..++|||+++++++.+.. -.
T Consensus 162 sKaAl~~l~r~la~el~~~gIrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~~~p~~r~~~peeva~~~~fL~s~~~~~it 241 (271)
T PRK06505 162 AKAALEASVRYLAADYGPQGIRVNAISAGPVRTLAGAGIGDARAIFSYQQRNSPLRRTVTIDEVGGSALYLLSDLSSGVT 241 (271)
T ss_pred hHHHHHHHHHHHHHHHhhcCeEEEEEecCCccccccccCcchHHHHHHHhhcCCccccCCHHHHHHHHHHHhCccccccC
Confidence 43321 2222233345679999999999865322110 00 0 00001111235688999999999987543 35
Q ss_pred CcEEEEecCC
Q 021854 278 GLIFEVVNGE 287 (306)
Q Consensus 278 g~~~~v~~g~ 287 (306)
|+++.+.+|-
T Consensus 242 G~~i~vdgG~ 251 (271)
T PRK06505 242 GEIHFVDSGY 251 (271)
T ss_pred ceEEeecCCc
Confidence 7888887664
|
|
| >PRK08594 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.43 E-value=8.2e-12 Score=112.79 Aligned_cols=189 Identities=13% Similarity=0.110 Sum_probs=120.0
Q ss_pred CCCeEEEEcCC--ChHHHHHHHHHHHCCCeEEEEecCcc---hhh---hhc-CCCceeeeccCCCHHHHHHHhc------
Q 021854 98 ARDAVLVTDGD--SDIGQMVILSLIVKRTRIKALVKDKR---NAM---ESF-GTYVESMAGDASNKKFLKTALR------ 162 (306)
Q Consensus 98 ~~~~ilVtGat--G~iG~~l~~~L~~~g~~V~~l~R~~~---~~~---~~~-~~~v~~v~~D~~d~~~l~~~~~------ 162 (306)
.+|+++||||+ ++||++++++|+++|++|+++.|+.+ .++ +.. +.++.++.+|++|.++++++++
T Consensus 6 ~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 85 (257)
T PRK08594 6 EGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFETIKEEV 85 (257)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHHhC
Confidence 47899999997 89999999999999999999877532 222 112 2467789999999988776653
Q ss_pred -CccEEEEcCC--------chh----------------------hhcccc--cCCCEEEEecCcccccCCCCcccccchH
Q 021854 163 -GVRSIICPSE--------GFI----------------------SNAGSL--KGVQHVILLSQLSVYRGSGGIQALMKGN 209 (306)
Q Consensus 163 -~~d~vi~~~~--------g~~----------------------~~~a~~--~gvkr~V~iSS~~~~~~~~~~~~~~~~~ 209 (306)
.+|++|++++ +.+ ...+.. ..-.+||++||..+..+......|..++
T Consensus 86 g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asK 165 (257)
T PRK08594 86 GVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGGSIVTLTYLGGERVVQNYNVMGVAK 165 (257)
T ss_pred CCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCceEEEEcccCCccCCCCCchhHHHH
Confidence 4699998732 100 000000 1225899999988766555555665544
Q ss_pred HHH--HHHHHHHHHHhcCCCEEEEEcCcccCCCCCC----cce--eeecCCCCccccCHHHHHHHHHHHhhCCC--CCCc
Q 021854 210 ARK--LAEQDESMLMASGIPYTIIRTGVLQNTPGGK----QGF--QFEEGCAANGSLSKEDAAFICVEALESIP--QTGL 279 (306)
Q Consensus 210 a~~--~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~----~~~--~~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~ 279 (306)
+.. +.+.....+...||++..|.||.+....... ... ..........+.+++|+|+++++++.... ..|+
T Consensus 166 aal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~~va~~~~~l~s~~~~~~tG~ 245 (257)
T PRK08594 166 ASLEASVKYLANDLGKDGIRVNAISAGPIRTLSAKGVGGFNSILKEIEERAPLRRTTTQEEVGDTAAFLFSDLSRGVTGE 245 (257)
T ss_pred HHHHHHHHHHHHHhhhcCCEEeeeecCcccCHhHhhhccccHHHHHHhhcCCccccCCHHHHHHHHHHHcCcccccccce
Confidence 321 1222223344578999999999865321100 000 00000111235788999999999987543 3577
Q ss_pred EEEEecC
Q 021854 280 IFEVVNG 286 (306)
Q Consensus 280 ~~~v~~g 286 (306)
++.+.+|
T Consensus 246 ~~~~dgg 252 (257)
T PRK08594 246 NIHVDSG 252 (257)
T ss_pred EEEECCc
Confidence 7877655
|
|
| >PRK06940 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.42 E-value=8.4e-12 Score=113.81 Aligned_cols=186 Identities=14% Similarity=0.105 Sum_probs=115.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh------cCCCceeeeccCCCHHHHHHHhc------Ccc
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR------GVR 165 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~~~------~~d 165 (306)
|+|+++|||| |+||++++++|+ +|++|+++.|+.++..+. .+.++.++.+|++|.+++.++++ .+|
T Consensus 1 ~~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~~g~id 78 (275)
T PRK06940 1 MKEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATAQTLGPVT 78 (275)
T ss_pred CCCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHhcCCCC
Confidence 5689999998 799999999996 899999999987653221 12357789999999988877764 479
Q ss_pred EEEEcCCch-------------------hhh----cccccCCCEEEEecCcccccCC-----------------------
Q 021854 166 SIICPSEGF-------------------ISN----AGSLKGVQHVILLSQLSVYRGS----------------------- 199 (306)
Q Consensus 166 ~vi~~~~g~-------------------~~~----~a~~~gvkr~V~iSS~~~~~~~----------------------- 199 (306)
++||+++-. +.+ .+.+. +++|++||..+....
T Consensus 79 ~li~nAG~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~--g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (275)
T PRK06940 79 GLVHTAGVSPSQASPEAILKVDLYGTALVLEEFGKVIAPG--GAGVVIASQSGHRLPALTAEQERALATTPTEELLSLPF 156 (275)
T ss_pred EEEECCCcCCchhhHHHHHHHhhHHHHHHHHHHHHHHhhC--CCEEEEEecccccCcccchhhhcccccccccccccccc
Confidence 999984311 111 11222 456778777654321
Q ss_pred -------CCcccccchHHHH--HHHHHHHHHHhcCCCEEEEEcCcccCCCCCC--cc---e---eeecCCCCccccCHHH
Q 021854 200 -------GGIQALMKGNARK--LAEQDESMLMASGIPYTIIRTGVLQNTPGGK--QG---F---QFEEGCAANGSLSKED 262 (306)
Q Consensus 200 -------~~~~~~~~~~a~~--~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~--~~---~---~~~~g~~~~~~Is~~D 262 (306)
.....|..+++.. +.+.....+...+|+++.|+||++....... .. . ..........+..++|
T Consensus 157 ~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gIrvn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pee 236 (275)
T PRK06940 157 LQPDAIEDSLHAYQIAKRANALRVMAEAVKWGERGARINSISPGIISTPLAQDELNGPRGDGYRNMFAKSPAGRPGTPDE 236 (275)
T ss_pred ccccccCCccchhHHHHHHHHHHHHHHHHHHccCCeEEEEeccCcCcCccchhhhcCCchHHHHHHhhhCCcccCCCHHH
Confidence 1123454443321 1111112234578999999999865332110 00 0 0000011133578899
Q ss_pred HHHHHHHHhhCCC--CCCcEEEEecCC
Q 021854 263 AAFICVEALESIP--QTGLIFEVVNGE 287 (306)
Q Consensus 263 VA~~iv~aL~~~~--~~g~~~~v~~g~ 287 (306)
+|+++.+++.+.. -.|+++.+.+|.
T Consensus 237 ia~~~~fL~s~~~~~itG~~i~vdgg~ 263 (275)
T PRK06940 237 IAALAEFLMGPRGSFITGSDFLVDGGA 263 (275)
T ss_pred HHHHHHHHcCcccCcccCceEEEcCCe
Confidence 9999999886543 357888887664
|
|
| >PRK07370 enoyl-(acyl carrier protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.42 E-value=6.6e-12 Score=113.41 Aligned_cols=187 Identities=12% Similarity=0.038 Sum_probs=118.4
Q ss_pred CCCeEEEEcCC--ChHHHHHHHHHHHCCCeEEEEecCcch------hhhh--cCCCceeeeccCCCHHHHHHHhc-----
Q 021854 98 ARDAVLVTDGD--SDIGQMVILSLIVKRTRIKALVKDKRN------AMES--FGTYVESMAGDASNKKFLKTALR----- 162 (306)
Q Consensus 98 ~~~~ilVtGat--G~iG~~l~~~L~~~g~~V~~l~R~~~~------~~~~--~~~~v~~v~~D~~d~~~l~~~~~----- 162 (306)
++++++||||+ ++||++++++|++.|++|++..|+.++ ..+. ....+.++.+|++|.++++++++
T Consensus 5 ~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~ 84 (258)
T PRK07370 5 TGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIKQK 84 (258)
T ss_pred CCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHHHH
Confidence 57899999986 799999999999999999888664331 1111 11246688999999988876653
Q ss_pred --CccEEEEcCCc--------hh--------------------------hhcccccCCCEEEEecCcccccCCCCccccc
Q 021854 163 --GVRSIICPSEG--------FI--------------------------SNAGSLKGVQHVILLSQLSVYRGSGGIQALM 206 (306)
Q Consensus 163 --~~d~vi~~~~g--------~~--------------------------~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~ 206 (306)
.+|++|++++. .+ ...+++ -++||++||..+..+......|.
T Consensus 85 ~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~--~g~Iv~isS~~~~~~~~~~~~Y~ 162 (258)
T PRK07370 85 WGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSE--GGSIVTLTYLGGVRAIPNYNVMG 162 (258)
T ss_pred cCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhh--CCeEEEEeccccccCCcccchhh
Confidence 46999988331 10 011222 26899999987766555555565
Q ss_pred chHHHH--HHHHHHHHHHhcCCCEEEEEcCcccCCCCC---C-cce--eeecCCCCccccCHHHHHHHHHHHhhCCC--C
Q 021854 207 KGNARK--LAEQDESMLMASGIPYTIIRTGVLQNTPGG---K-QGF--QFEEGCAANGSLSKEDAAFICVEALESIP--Q 276 (306)
Q Consensus 207 ~~~a~~--~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~---~-~~~--~~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~ 276 (306)
.+++.. +.+.....+...||+++.|.||++...... . ... .+........+..++|||.++..++.++. -
T Consensus 163 asKaal~~l~~~la~el~~~gI~Vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~~~fl~s~~~~~~ 242 (258)
T PRK07370 163 VAKAALEASVRYLAAELGPKNIRVNAISAGPIRTLASSAVGGILDMIHHVEEKAPLRRTVTQTEVGNTAAFLLSDLASGI 242 (258)
T ss_pred HHHHHHHHHHHHHHHHhCcCCeEEEEEecCcccCchhhccccchhhhhhhhhcCCcCcCCCHHHHHHHHHHHhChhhccc
Confidence 544322 222222233457899999999987533211 0 000 00011111235678999999999987543 3
Q ss_pred CCcEEEEecC
Q 021854 277 TGLIFEVVNG 286 (306)
Q Consensus 277 ~g~~~~v~~g 286 (306)
.|+++.+.+|
T Consensus 243 tG~~i~vdgg 252 (258)
T PRK07370 243 TGQTIYVDAG 252 (258)
T ss_pred cCcEEEECCc
Confidence 5778887765
|
|
| >PRK08690 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.42 E-value=1.1e-11 Score=112.25 Aligned_cols=189 Identities=13% Similarity=0.085 Sum_probs=120.1
Q ss_pred CCCeEEEEcC--CChHHHHHHHHHHHCCCeEEEEecCcc---hhhhhcC--CCceeeeccCCCHHHHHHHhc-------C
Q 021854 98 ARDAVLVTDG--DSDIGQMVILSLIVKRTRIKALVKDKR---NAMESFG--TYVESMAGDASNKKFLKTALR-------G 163 (306)
Q Consensus 98 ~~~~ilVtGa--tG~iG~~l~~~L~~~g~~V~~l~R~~~---~~~~~~~--~~v~~v~~D~~d~~~l~~~~~-------~ 163 (306)
.+++++|||| +++||++++++|+++|++|++..|... .+.+... .....+.+|++|.++++++++ .
T Consensus 5 ~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 84 (261)
T PRK08690 5 QGKKILITGMISERSIAYGIAKACREQGAELAFTYVVDKLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHWDG 84 (261)
T ss_pred CCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHHhCC
Confidence 4689999997 679999999999999999998876532 1222211 234578999999988877663 5
Q ss_pred ccEEEEcCCc---------hhh--------------------------hcccccCCCEEEEecCcccccCCCCcccccch
Q 021854 164 VRSIICPSEG---------FIS--------------------------NAGSLKGVQHVILLSQLSVYRGSGGIQALMKG 208 (306)
Q Consensus 164 ~d~vi~~~~g---------~~~--------------------------~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~ 208 (306)
+|++|++++- ++. ...+ .+-.++|++||.....+......|..+
T Consensus 85 iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~-~~~g~Iv~iss~~~~~~~~~~~~Y~as 163 (261)
T PRK08690 85 LDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMR-GRNSAIVALSYLGAVRAIPNYNVMGMA 163 (261)
T ss_pred CcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhh-hcCcEEEEEcccccccCCCCcccchhH
Confidence 7999988321 000 0011 222589999998876655555556544
Q ss_pred HHHH--HHHHHHHHHHhcCCCEEEEEcCcccCCCCCC--c-cee---eecCCCCccccCHHHHHHHHHHHhhCCC--CCC
Q 021854 209 NARK--LAEQDESMLMASGIPYTIIRTGVLQNTPGGK--Q-GFQ---FEEGCAANGSLSKEDAAFICVEALESIP--QTG 278 (306)
Q Consensus 209 ~a~~--~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~--~-~~~---~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g 278 (306)
++.. +.+.....+...||+++.|.||++....... . ... +........+..++|||+++..++.+.. ..|
T Consensus 164 Kaal~~l~~~la~e~~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~v~~l~s~~~~~~tG 243 (261)
T PRK08690 164 KASLEAGIRFTAACLGKEGIRCNGISAGPIKTLAASGIADFGKLLGHVAAHNPLRRNVTIEEVGNTAAFLLSDLSSGITG 243 (261)
T ss_pred HHHHHHHHHHHHHHhhhcCeEEEEEecCcccchhhhcCCchHHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCcccCCcce
Confidence 3321 1122223345679999999999865322110 0 000 0011112345788999999999998543 467
Q ss_pred cEEEEecCC
Q 021854 279 LIFEVVNGE 287 (306)
Q Consensus 279 ~~~~v~~g~ 287 (306)
+++.+.+|.
T Consensus 244 ~~i~vdgG~ 252 (261)
T PRK08690 244 EITYVDGGY 252 (261)
T ss_pred eEEEEcCCc
Confidence 888887664
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.41 E-value=7.4e-12 Score=123.91 Aligned_cols=188 Identities=13% Similarity=0.083 Sum_probs=121.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh---cCCCceeeeccCCCHHHHHHHhc-------CccEE
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALR-------GVRSI 167 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~---~~~~v~~v~~D~~d~~~l~~~~~-------~~d~v 167 (306)
.+++++||||+++||++++++|+++|++|+++.|+.++..+. .+.++.++.+|++|.++++++++ .+|++
T Consensus 4 ~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~l 83 (520)
T PRK06484 4 QSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSLGPDHHALAMDVSDEAQIREGFEQLHREFGRIDVL 83 (520)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEeccCCHHHHHHHHHHHHHHhCCCCEE
Confidence 478999999999999999999999999999999988764322 34467789999999988877664 47999
Q ss_pred EEcCCc------h----------------------h----hhcccccCCC-EEEEecCcccccCCCCcccccchHHHH--
Q 021854 168 ICPSEG------F----------------------I----SNAGSLKGVQ-HVILLSQLSVYRGSGGIQALMKGNARK-- 212 (306)
Q Consensus 168 i~~~~g------~----------------------~----~~~a~~~gvk-r~V~iSS~~~~~~~~~~~~~~~~~a~~-- 212 (306)
||+++. . + ...+.+.+-. ++|++||..+..+......|..+++..
T Consensus 84 i~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~~~~~~~~~Y~asKaal~~ 163 (520)
T PRK06484 84 VNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGLVALPKRTAYSASKAAVIS 163 (520)
T ss_pred EECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccCCCCCCCchHHHHHHHHHH
Confidence 998431 0 0 0112223333 899999988877666666666544322
Q ss_pred HHHHHHHHHHhcCCCEEEEEcCcccCCCCCC---c-cee---eecCCCCccccCHHHHHHHHHHHhhCCC--CCCcEEEE
Q 021854 213 LAEQDESMLMASGIPYTIIRTGVLQNTPGGK---Q-GFQ---FEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEV 283 (306)
Q Consensus 213 ~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~---~-~~~---~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~~~v 283 (306)
+.+.....+...+++++.|+||.+....... . ... .........+.+++|+|+++..++.++. ..|+.+.+
T Consensus 164 l~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~v~~l~~~~~~~~~G~~~~~ 243 (520)
T PRK06484 164 LTRSLACEWAAKGIRVNAVLPGYVRTQMVAELERAGKLDPSAVRSRIPLGRLGRPEEIAEAVFFLASDQASYITGSTLVV 243 (520)
T ss_pred HHHHHHHHhhhhCeEEEEEccCCcCchhhhhhcccchhhhHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccCceEEe
Confidence 1122222344568999999999864322100 0 000 0000011234688999999999887532 34555555
Q ss_pred ec
Q 021854 284 VN 285 (306)
Q Consensus 284 ~~ 285 (306)
.+
T Consensus 244 ~g 245 (520)
T PRK06484 244 DG 245 (520)
T ss_pred cC
Confidence 44
|
|
| >PRK06953 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.41 E-value=1.8e-11 Score=107.66 Aligned_cols=170 Identities=14% Similarity=0.096 Sum_probs=111.9
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHh---c--CccEEEEcCCch
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTAL---R--GVRSIICPSEGF 174 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~---~--~~d~vi~~~~g~ 174 (306)
++++||||+|+||++++++|+++|++|+++.|+.++..+....+++++.+|++|.+.+++++ . .+|++||+++..
T Consensus 2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~d~vi~~ag~~ 81 (222)
T PRK06953 2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAALQALGAEALALDVADPASVAGLAWKLDGEALDAAVYVAGVY 81 (222)
T ss_pred ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHHhccceEEEecCCCHHHHHHHHHHhcCCCCCEEEECCCcc
Confidence 68999999999999999999999999999999987655443345778999999998887754 2 379999983311
Q ss_pred ----------------------------hhhccc---ccCCCEEEEecCcccccCCCCc---ccccchHHHHHHHHHHHH
Q 021854 175 ----------------------------ISNAGS---LKGVQHVILLSQLSVYRGSGGI---QALMKGNARKLAEQDESM 220 (306)
Q Consensus 175 ----------------------------~~~~a~---~~gvkr~V~iSS~~~~~~~~~~---~~~~~~~a~~~~~~aE~~ 220 (306)
+.+++. ...-.++|++||..+..+.... ..|..+++ ..+.+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~Y~~sK~-----a~~~~ 156 (222)
T PRK06953 82 GPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAAGGVLAVLSSRMGSIGDATGTTGWLYRASKA-----ALNDA 156 (222)
T ss_pred cCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhccCCeEEEEcCcccccccccCCCccccHHhHH-----HHHHH
Confidence 001111 1223579999887654332221 13433222 22222
Q ss_pred HH-----hcCCCEEEEEcCcccCCCCCCcceeeecCCCCccccCHHHHHHHHHHHhhCCC--CCCcEEEEec
Q 021854 221 LM-----ASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVN 285 (306)
Q Consensus 221 l~-----~sgi~~tiiRPg~l~~~~~~~~~~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~~~v~~ 285 (306)
++ ..+++++.|+||++...... ..+.++.++.+..+..++.... ..+..|+..+
T Consensus 157 ~~~~~~~~~~i~v~~v~Pg~i~t~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (222)
T PRK06953 157 LRAASLQARHATCIALHPGWVRTDMGG-----------AQAALDPAQSVAGMRRVIAQATRRDNGRFFQYDG 217 (222)
T ss_pred HHHHhhhccCcEEEEECCCeeecCCCC-----------CCCCCCHHHHHHHHHHHHHhcCcccCceEEeeCC
Confidence 22 24788999999987543211 1235788999999999876443 3455565543
|
|
| >PRK06197 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.41 E-value=7.6e-12 Score=115.65 Aligned_cols=100 Identities=13% Similarity=0.094 Sum_probs=76.1
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhh-------hc-CCCceeeeccCCCHHHHHHHhc------
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME-------SF-GTYVESMAGDASNKKFLKTALR------ 162 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~-------~~-~~~v~~v~~D~~d~~~l~~~~~------ 162 (306)
..+++|+||||+|+||++++++|+++|++|++++|+.++..+ .. +..+.++.+|++|.++++++++
T Consensus 14 ~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~ 93 (306)
T PRK06197 14 QSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRAAY 93 (306)
T ss_pred CCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhhC
Confidence 357999999999999999999999999999999998765321 11 2357889999999988877664
Q ss_pred -CccEEEEcCCch----------------------------hhhcccccCCCEEEEecCcccc
Q 021854 163 -GVRSIICPSEGF----------------------------ISNAGSLKGVQHVILLSQLSVY 196 (306)
Q Consensus 163 -~~d~vi~~~~g~----------------------------~~~~a~~~gvkr~V~iSS~~~~ 196 (306)
.+|++||+++.. +.+.+++.+.++||++||..++
T Consensus 94 ~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~ 156 (306)
T PRK06197 94 PRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVPGSRVVTVSSGGHR 156 (306)
T ss_pred CCCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEECCHHHh
Confidence 479999984310 1122344556799999998643
|
|
| >PRK07533 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.40 E-value=1.9e-11 Score=110.39 Aligned_cols=189 Identities=10% Similarity=-0.017 Sum_probs=119.0
Q ss_pred cCCCeEEEEcCC--ChHHHHHHHHHHHCCCeEEEEecCcch---hhhhcC--CCceeeeccCCCHHHHHHHhc-------
Q 021854 97 EARDAVLVTDGD--SDIGQMVILSLIVKRTRIKALVKDKRN---AMESFG--TYVESMAGDASNKKFLKTALR------- 162 (306)
Q Consensus 97 ~~~~~ilVtGat--G~iG~~l~~~L~~~g~~V~~l~R~~~~---~~~~~~--~~v~~v~~D~~d~~~l~~~~~------- 162 (306)
..+|+++||||+ ++||++++++|+++|++|++..|+.+. +.+... ..+.++.+|++|.++++++++
T Consensus 8 ~~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 87 (258)
T PRK07533 8 LAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAEEWG 87 (258)
T ss_pred cCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHHHcC
Confidence 357999999998 489999999999999999999987542 111111 234578899999988876653
Q ss_pred CccEEEEcCCc--------h--------------------------hhhcccccCCCEEEEecCcccccCCCCcccccch
Q 021854 163 GVRSIICPSEG--------F--------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKG 208 (306)
Q Consensus 163 ~~d~vi~~~~g--------~--------------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~ 208 (306)
.+|++|++++- . ....+++ -.++|++||..+..+......|..+
T Consensus 88 ~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~--~g~Ii~iss~~~~~~~~~~~~Y~as 165 (258)
T PRK07533 88 RLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTN--GGSLLTMSYYGAEKVVENYNLMGPV 165 (258)
T ss_pred CCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhcc--CCEEEEEeccccccCCccchhhHHH
Confidence 46999987321 0 0011221 2589999998776544444455443
Q ss_pred HHHH--HHHHHHHHHHhcCCCEEEEEcCcccCCCCCC----cce--eeecCCCCccccCHHHHHHHHHHHhhCC--CCCC
Q 021854 209 NARK--LAEQDESMLMASGIPYTIIRTGVLQNTPGGK----QGF--QFEEGCAANGSLSKEDAAFICVEALESI--PQTG 278 (306)
Q Consensus 209 ~a~~--~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~----~~~--~~~~g~~~~~~Is~~DVA~~iv~aL~~~--~~~g 278 (306)
++.. +.+.....+...+|++..|.||++....... ... .+........+..++|+|.++++++.+. .-.|
T Consensus 166 Kaal~~l~~~la~el~~~gI~Vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~~~~L~s~~~~~itG 245 (258)
T PRK07533 166 KAALESSVRYLAAELGPKGIRVHAISPGPLKTRAASGIDDFDALLEDAAERAPLRRLVDIDDVGAVAAFLASDAARRLTG 245 (258)
T ss_pred HHHHHHHHHHHHHHhhhcCcEEEEEecCCcCChhhhccCCcHHHHHHHHhcCCcCCCCCHHHHHHHHHHHhChhhccccC
Confidence 3321 1222223344578999999999864322110 000 0001111234578899999999998753 3467
Q ss_pred cEEEEecCC
Q 021854 279 LIFEVVNGE 287 (306)
Q Consensus 279 ~~~~v~~g~ 287 (306)
+.+.+.+|.
T Consensus 246 ~~i~vdgg~ 254 (258)
T PRK07533 246 NTLYIDGGY 254 (258)
T ss_pred cEEeeCCcc
Confidence 888877653
|
|
| >PRK09009 C factor cell-cell signaling protein; Provisional | Back alignment and domain information |
|---|
Probab=99.39 E-value=3e-11 Score=106.96 Aligned_cols=182 Identities=12% Similarity=0.078 Sum_probs=111.5
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCC--CeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHH---hcCccEEEEcCCch
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA---LRGVRSIICPSEGF 174 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~g--~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~---~~~~d~vi~~~~g~ 174 (306)
|+|+||||+|+||++++++|+++| ..|.+..|+.... ....++.++++|++|.++++++ +.++|++|++++..
T Consensus 1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~--~~~~~~~~~~~Dls~~~~~~~~~~~~~~id~li~~aG~~ 78 (235)
T PRK09009 1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPD--FQHDNVQWHALDVTDEAEIKQLSEQFTQLDWLINCVGML 78 (235)
T ss_pred CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCccc--cccCceEEEEecCCCHHHHHHHHHhcCCCCEEEECCccc
Confidence 589999999999999999999985 5666666655332 1234678899999998877664 45789999983311
Q ss_pred ------------------------------------hhhcccccCCCEEEEecCccccc---CCCCcccccchHHHHH--
Q 021854 175 ------------------------------------ISNAGSLKGVQHVILLSQLSVYR---GSGGIQALMKGNARKL-- 213 (306)
Q Consensus 175 ------------------------------------~~~~a~~~gvkr~V~iSS~~~~~---~~~~~~~~~~~~a~~~-- 213 (306)
+...+++.+..+++++||..... +..+...|..+++...
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~~~i~~iss~~~~~~~~~~~~~~~Y~asK~a~~~~ 158 (235)
T PRK09009 79 HTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSESAKFAVISAKVGSISDNRLGGWYSYRASKAALNMF 158 (235)
T ss_pred cccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCCceEEEEeecccccccCCCCCcchhhhhHHHHHHH
Confidence 01113334556899998754321 1122334543332111
Q ss_pred HHHHHHHHHh--cCCCEEEEEcCcccCCCCCCcceeeecCCCCccccCHHHHHHHHHHHhhCCC--CCCcEEEEecCC
Q 021854 214 AEQDESMLMA--SGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVNGE 287 (306)
Q Consensus 214 ~~~aE~~l~~--sgi~~tiiRPg~l~~~~~~~~~~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~~~v~~g~ 287 (306)
.+.....+.. .++.+..|.||++....... .. .......+++.+|+|+.++.++.... ..|..+.+.++.
T Consensus 159 ~~~la~e~~~~~~~i~v~~v~PG~v~t~~~~~--~~--~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~~g~~ 232 (235)
T PRK09009 159 LKTLSIEWQRSLKHGVVLALHPGTTDTALSKP--FQ--QNVPKGKLFTPEYVAQCLLGIIANATPAQSGSFLAYDGET 232 (235)
T ss_pred HHHHHHHhhcccCCeEEEEEcccceecCCCcc--hh--hccccCCCCCHHHHHHHHHHHHHcCChhhCCcEEeeCCcC
Confidence 1111111222 47889999999865333211 10 11122346899999999999998753 356666665443
|
|
| >PRK06603 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.38 E-value=1.9e-11 Score=110.52 Aligned_cols=187 Identities=10% Similarity=-0.005 Sum_probs=118.0
Q ss_pred CCCeEEEEcCCC--hHHHHHHHHHHHCCCeEEEEecCcc---hhhhhcC--CCceeeeccCCCHHHHHHHhc-------C
Q 021854 98 ARDAVLVTDGDS--DIGQMVILSLIVKRTRIKALVKDKR---NAMESFG--TYVESMAGDASNKKFLKTALR-------G 163 (306)
Q Consensus 98 ~~~~ilVtGatG--~iG~~l~~~L~~~g~~V~~l~R~~~---~~~~~~~--~~v~~v~~D~~d~~~l~~~~~-------~ 163 (306)
.+|+++||||++ +||++++++|+++|++|++..|+.. ...+... ....++.+|++|+++++++++ .
T Consensus 7 ~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 86 (260)
T PRK06603 7 QGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKEKWGS 86 (260)
T ss_pred CCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCchHHHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 468999999997 8999999999999999999888742 1111111 122356899999988877663 4
Q ss_pred ccEEEEcCCc--------hh--------------------------hhcccccCCCEEEEecCcccccCCCCcccccchH
Q 021854 164 VRSIICPSEG--------FI--------------------------SNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGN 209 (306)
Q Consensus 164 ~d~vi~~~~g--------~~--------------------------~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~ 209 (306)
+|++|++++. .+ ...++ .-.++|++||..+..+......|..++
T Consensus 87 iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~--~~G~Iv~isS~~~~~~~~~~~~Y~asK 164 (260)
T PRK06603 87 FDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMH--DGGSIVTLTYYGAEKVIPNYNVMGVAK 164 (260)
T ss_pred ccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhc--cCceEEEEecCccccCCCcccchhhHH
Confidence 6999987321 00 00111 125899999987765555555665544
Q ss_pred HHH--HHHHHHHHHHhcCCCEEEEEcCcccCCCCC--Cc--ce--eeecCCCCccccCHHHHHHHHHHHhhCCC--CCCc
Q 021854 210 ARK--LAEQDESMLMASGIPYTIIRTGVLQNTPGG--KQ--GF--QFEEGCAANGSLSKEDAAFICVEALESIP--QTGL 279 (306)
Q Consensus 210 a~~--~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~--~~--~~--~~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~ 279 (306)
+.- +.+.....+...+|++..|.||++...... .. .. .+........+..++|+|+++++++.... ..|+
T Consensus 165 aal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~~~~L~s~~~~~itG~ 244 (260)
T PRK06603 165 AALEASVKYLANDMGENNIRVNAISAGPIKTLASSAIGDFSTMLKSHAATAPLKRNTTQEDVGGAAVYLFSELSKGVTGE 244 (260)
T ss_pred HHHHHHHHHHHHHhhhcCeEEEEEecCcCcchhhhcCCCcHHHHHHHHhcCCcCCCCCHHHHHHHHHHHhCcccccCcce
Confidence 321 122222334567899999999986432110 00 00 00000111235688999999999997543 3577
Q ss_pred EEEEecC
Q 021854 280 IFEVVNG 286 (306)
Q Consensus 280 ~~~v~~g 286 (306)
++.+.+|
T Consensus 245 ~i~vdgG 251 (260)
T PRK06603 245 IHYVDCG 251 (260)
T ss_pred EEEeCCc
Confidence 7887765
|
|
| >KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.38 E-value=1.3e-11 Score=111.60 Aligned_cols=174 Identities=16% Similarity=0.146 Sum_probs=125.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhc---C--CCceeeeccCCCHHHHHHHh-------cCcc
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF---G--TYVESMAGDASNKKFLKTAL-------RGVR 165 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~---~--~~v~~v~~D~~d~~~l~~~~-------~~~d 165 (306)
.++.||||||++++|++++.+++++|..+++.+.+.+...+.. . ..++.+.+|++|++++.+.. ..+|
T Consensus 37 ~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~Vk~e~G~V~ 116 (300)
T KOG1201|consen 37 SGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRLAKKVKKEVGDVD 116 (300)
T ss_pred cCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcCceeEEEecCCCHHHHHHHHHHHHHhcCCce
Confidence 5799999999999999999999999998888888886533211 1 25889999999987766544 3568
Q ss_pred EEEEcCC---ch---------------------------hhhcccccCCCEEEEecCcccccCCCCcccccchHHHH--H
Q 021854 166 SIICPSE---GF---------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK--L 213 (306)
Q Consensus 166 ~vi~~~~---g~---------------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~--~ 213 (306)
++|++++ +. +...+.+.+-.|+|-++|..+..+..+...|..+++.. .
T Consensus 117 ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~~GHIV~IaS~aG~~g~~gl~~YcaSK~a~vGf 196 (300)
T KOG1201|consen 117 ILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENNNGHIVTIASVAGLFGPAGLADYCASKFAAVGF 196 (300)
T ss_pred EEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcCCceEEEehhhhcccCCccchhhhhhHHHHHHH
Confidence 8888743 11 22235567788999999999998888888998775432 3
Q ss_pred HHHHHHHHHh---cCCCEEEEEcCcccCCCCCCcceeeecCCCCccccCHHHHHHHHHHHhhCCC
Q 021854 214 AEQDESMLMA---SGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIP 275 (306)
Q Consensus 214 ~~~aE~~l~~---sgi~~tiiRPg~l~~~~~~~~~~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~ 275 (306)
++-....|++ .+++.|.+.|+.+.++.-.+ .. .-....+.+.++.||+.+++++...+
T Consensus 197 hesL~~EL~~~~~~~IktTlv~P~~i~Tgmf~~-~~---~~~~l~P~L~p~~va~~Iv~ai~~n~ 257 (300)
T KOG1201|consen 197 HESLSMELRALGKDGIKTTLVCPYFINTGMFDG-AT---PFPTLAPLLEPEYVAKRIVEAILTNQ 257 (300)
T ss_pred HHHHHHHHHhcCCCCeeEEEEeeeeccccccCC-CC---CCccccCCCCHHHHHHHHHHHHHcCC
Confidence 3333333443 46999999998866433222 11 11223577899999999999998764
|
|
| >TIGR01500 sepiapter_red sepiapterin reductase | Back alignment and domain information |
|---|
Probab=99.38 E-value=5.8e-12 Score=113.37 Aligned_cols=182 Identities=15% Similarity=0.088 Sum_probs=113.8
Q ss_pred eEEEEcCCChHHHHHHHHHHH----CCCeEEEEecCcchhhhh---c-----CCCceeeeccCCCHHHHHHHhcCc----
Q 021854 101 AVLVTDGDSDIGQMVILSLIV----KRTRIKALVKDKRNAMES---F-----GTYVESMAGDASNKKFLKTALRGV---- 164 (306)
Q Consensus 101 ~ilVtGatG~iG~~l~~~L~~----~g~~V~~l~R~~~~~~~~---~-----~~~v~~v~~D~~d~~~l~~~~~~~---- 164 (306)
.++||||+++||.+++++|++ .|++|+++.|+.+++.+. . +..+.++.+|++|.++++++++.+
T Consensus 2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~ 81 (256)
T TIGR01500 2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKALRELP 81 (256)
T ss_pred EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHhcc
Confidence 689999999999999999997 799999999988753321 1 235788999999998887766422
Q ss_pred -------cEEEEcCCc-----h-h---------------------------hhccccc-C-CCEEEEecCcccccCCCCc
Q 021854 165 -------RSIICPSEG-----F-I---------------------------SNAGSLK-G-VQHVILLSQLSVYRGSGGI 202 (306)
Q Consensus 165 -------d~vi~~~~g-----~-~---------------------------~~~a~~~-g-vkr~V~iSS~~~~~~~~~~ 202 (306)
|++||+++. . . .....+. + .+++|++||..+..+..+.
T Consensus 82 g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~~~~~~~~~ 161 (256)
T TIGR01500 82 RPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAIQPFKGW 161 (256)
T ss_pred ccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHHhCCCCCCc
Confidence 477776331 0 0 0111222 2 3589999999877666566
Q ss_pred ccccchHHHHH--HHHHHHHHHhcCCCEEEEEcCcccCCCCCC------ccee---eecCCCCccccCHHHHHHHHHHHh
Q 021854 203 QALMKGNARKL--AEQDESMLMASGIPYTIIRTGVLQNTPGGK------QGFQ---FEEGCAANGSLSKEDAAFICVEAL 271 (306)
Q Consensus 203 ~~~~~~~a~~~--~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~------~~~~---~~~g~~~~~~Is~~DVA~~iv~aL 271 (306)
..|..+++... .+.....+...++.++.|.||++....... .+.. +........+.+++|+|..++.++
T Consensus 162 ~~Y~asKaal~~l~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~eva~~~~~l~ 241 (256)
T TIGR01500 162 ALYCAGKAARDMLFQVLALEEKNPNVRVLNYAPGVLDTDMQQQVREESVDPDMRKGLQELKAKGKLVDPKVSAQKLLSLL 241 (256)
T ss_pred hHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCcccchHHHHHHHhcCChhHHHHHHHHHhcCCCCCHHHHHHHHHHHH
Confidence 66655443221 111112233468999999999875322110 0000 000001123678999999999999
Q ss_pred hCCC-CCCcEEE
Q 021854 272 ESIP-QTGLIFE 282 (306)
Q Consensus 272 ~~~~-~~g~~~~ 282 (306)
++.. ..|+.+.
T Consensus 242 ~~~~~~~G~~~~ 253 (256)
T TIGR01500 242 EKDKFKSGAHVD 253 (256)
T ss_pred hcCCcCCcceee
Confidence 6433 3344443
|
This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs. |
| >PRK08159 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.37 E-value=1.9e-11 Score=111.34 Aligned_cols=190 Identities=9% Similarity=0.038 Sum_probs=119.2
Q ss_pred CCCeEEEEcCC--ChHHHHHHHHHHHCCCeEEEEecCcc---hhhhhcC--CCceeeeccCCCHHHHHHHhc-------C
Q 021854 98 ARDAVLVTDGD--SDIGQMVILSLIVKRTRIKALVKDKR---NAMESFG--TYVESMAGDASNKKFLKTALR-------G 163 (306)
Q Consensus 98 ~~~~ilVtGat--G~iG~~l~~~L~~~g~~V~~l~R~~~---~~~~~~~--~~v~~v~~D~~d~~~l~~~~~-------~ 163 (306)
.+|+++||||+ ++||++++++|+++|++|++..|+.. +..+... ....++.+|++|.++++++++ .
T Consensus 9 ~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 88 (272)
T PRK08159 9 AGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKKWGK 88 (272)
T ss_pred cCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHhcCC
Confidence 46899999997 79999999999999999998887632 2221111 235578999999988877654 4
Q ss_pred ccEEEEcCCc--------h----------------------hhhcccc--cCCCEEEEecCcccccCCCCcccccchHHH
Q 021854 164 VRSIICPSEG--------F----------------------ISNAGSL--KGVQHVILLSQLSVYRGSGGIQALMKGNAR 211 (306)
Q Consensus 164 ~d~vi~~~~g--------~----------------------~~~~a~~--~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~ 211 (306)
+|++|++++. . +...+.. .+-.++|++||.++..+......|..+++.
T Consensus 89 iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~~~p~~~~Y~asKaa 168 (272)
T PRK08159 89 LDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTDGGSILTLTYYGAEKVMPHYNVMGVAKAA 168 (272)
T ss_pred CcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCCCceEEEEeccccccCCCcchhhhhHHHH
Confidence 6999988321 0 0000100 122689999998766554455556554332
Q ss_pred H--HHHHHHHHHHhcCCCEEEEEcCcccCCCCCC-cc--ee--eec-CCCCccccCHHHHHHHHHHHhhCCC--CCCcEE
Q 021854 212 K--LAEQDESMLMASGIPYTIIRTGVLQNTPGGK-QG--FQ--FEE-GCAANGSLSKEDAAFICVEALESIP--QTGLIF 281 (306)
Q Consensus 212 ~--~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~-~~--~~--~~~-g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~~ 281 (306)
. +.+.....+...+|++..|.||++....... .. .. ... ......+..++|+|+++++++.... ..|+++
T Consensus 169 l~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~~~~L~s~~~~~itG~~i 248 (272)
T PRK08159 169 LEASVKYLAVDLGPKNIRVNAISAGPIKTLAASGIGDFRYILKWNEYNAPLRRTVTIEEVGDSALYLLSDLSRGVTGEVH 248 (272)
T ss_pred HHHHHHHHHHHhcccCeEEEEeecCCcCCHHHhcCCcchHHHHHHHhCCcccccCCHHHHHHHHHHHhCccccCccceEE
Confidence 1 2222223344578999999999864321100 00 00 000 1111235688999999999997543 467788
Q ss_pred EEecCC
Q 021854 282 EVVNGE 287 (306)
Q Consensus 282 ~v~~g~ 287 (306)
.+.+|.
T Consensus 249 ~vdgG~ 254 (272)
T PRK08159 249 HVDSGY 254 (272)
T ss_pred EECCCc
Confidence 888764
|
|
| >PRK07453 protochlorophyllide oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=99.36 E-value=7.5e-12 Score=116.57 Aligned_cols=75 Identities=12% Similarity=0.236 Sum_probs=62.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh---c---CCCceeeeccCCCHHHHHHHhcC-------c
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---F---GTYVESMAGDASNKKFLKTALRG-------V 164 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~---~---~~~v~~v~~D~~d~~~l~~~~~~-------~ 164 (306)
.+++|+||||+|+||.+++++|+++|++|++++|+.++..+. . +..+.++.+|++|.++++++++. +
T Consensus 5 ~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i 84 (322)
T PRK07453 5 AKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALGKPL 84 (322)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhCCCc
Confidence 478999999999999999999999999999999988764321 1 23678899999999988877753 7
Q ss_pred cEEEEcCC
Q 021854 165 RSIICPSE 172 (306)
Q Consensus 165 d~vi~~~~ 172 (306)
|++||+++
T Consensus 85 D~li~nAg 92 (322)
T PRK07453 85 DALVCNAA 92 (322)
T ss_pred cEEEECCc
Confidence 99999843
|
|
| >TIGR02685 pter_reduc_Leis pteridine reductase | Back alignment and domain information |
|---|
Probab=99.36 E-value=2.8e-11 Score=109.61 Aligned_cols=188 Identities=14% Similarity=0.104 Sum_probs=114.7
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCc-chhh---hhc----CCCceeeeccCCCHHHH----HHHh------
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK-RNAM---ESF----GTYVESMAGDASNKKFL----KTAL------ 161 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~-~~~~---~~~----~~~v~~v~~D~~d~~~l----~~~~------ 161 (306)
++++||||+++||++++++|+++|++|+++.|.. ++.. +.+ +..+.++.+|++|.+++ ++++
T Consensus 2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~~ 81 (267)
T TIGR02685 2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFRA 81 (267)
T ss_pred CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHHc
Confidence 5799999999999999999999999999987653 3321 111 23466789999997644 3332
Q ss_pred -cCccEEEEcCCch-------------------------------------hhhc----ccc------cCCCEEEEecCc
Q 021854 162 -RGVRSIICPSEGF-------------------------------------ISNA----GSL------KGVQHVILLSQL 193 (306)
Q Consensus 162 -~~~d~vi~~~~g~-------------------------------------~~~~----a~~------~gvkr~V~iSS~ 193 (306)
.++|++||+++.. +..+ ... ....++|++||.
T Consensus 82 ~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~~s~ 161 (267)
T TIGR02685 82 FGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLCDA 161 (267)
T ss_pred cCCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEEEehhh
Confidence 4689999984310 0000 101 112478888887
Q ss_pred ccccCCCCcccccchHHHH--HHHHHHHHHHhcCCCEEEEEcCcccCCCCCCcce--eeecCCCC-ccccCHHHHHHHHH
Q 021854 194 SVYRGSGGIQALMKGNARK--LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGF--QFEEGCAA-NGSLSKEDAAFICV 268 (306)
Q Consensus 194 ~~~~~~~~~~~~~~~~a~~--~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~~~~--~~~~g~~~-~~~Is~~DVA~~iv 268 (306)
....+......|..+++.. +.+.....+...|++++.|+||++.......... .+...... ..+.+++|+|.+++
T Consensus 162 ~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~ 241 (267)
T TIGR02685 162 MTDQPLLGFTMYTMAKHALEGLTRSAALELAPLQIRVNGVAPGLSLLPDAMPFEVQEDYRRKVPLGQREASAEQIADVVI 241 (267)
T ss_pred hccCCCcccchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCccCccccchhHHHHHHHhCCCCcCCCCHHHHHHHHH
Confidence 7665555555665544321 1222222234578999999999863211110000 01010011 13578999999999
Q ss_pred HHhhCCC--CCCcEEEEecCC
Q 021854 269 EALESIP--QTGLIFEVVNGE 287 (306)
Q Consensus 269 ~aL~~~~--~~g~~~~v~~g~ 287 (306)
.++..+. ..|+.+.+.++.
T Consensus 242 ~l~~~~~~~~~G~~~~v~gg~ 262 (267)
T TIGR02685 242 FLVSPKAKYITGTCIKVDGGL 262 (267)
T ss_pred HHhCcccCCcccceEEECCce
Confidence 9987643 357788877653
|
Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family. |
| >PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.36 E-value=2.9e-11 Score=117.79 Aligned_cols=191 Identities=15% Similarity=0.082 Sum_probs=121.2
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcch--hhhhc-CCCceeeeccCCCHHHHHHHhc-------CccE
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN--AMESF-GTYVESMAGDASNKKFLKTALR-------GVRS 166 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~--~~~~~-~~~v~~v~~D~~d~~~l~~~~~-------~~d~ 166 (306)
..+++++||||+|+||.++++.|+++|++|+++.|.... ..+.. ..+..++.+|++|.++++++++ .+|+
T Consensus 208 ~~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~ 287 (450)
T PRK08261 208 LAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRVGGTALALDITAPDAPARIAEHLAERHGGLDI 287 (450)
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhCCCCCE
Confidence 457899999999999999999999999999999885422 22111 1235678899999988777654 5799
Q ss_pred EEEcCCch--------------------------hhhcccc----cCCCEEEEecCcccccCCCCcccccchHHHH--HH
Q 021854 167 IICPSEGF--------------------------ISNAGSL----KGVQHVILLSQLSVYRGSGGIQALMKGNARK--LA 214 (306)
Q Consensus 167 vi~~~~g~--------------------------~~~~a~~----~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~--~~ 214 (306)
|||+++.. +.+++.. ..-.+||++||..+..+..+...|..+++.. +.
T Consensus 288 vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~~~~g~~~~~~Y~asKaal~~~~ 367 (450)
T PRK08261 288 VVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSISGIAGNRGQTNYAASKAGVIGLV 367 (450)
T ss_pred EEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCCCChHHHHHHHHHHHHH
Confidence 99984411 1111111 2337899999988766555556665543311 12
Q ss_pred HHHHHHHHhcCCCEEEEEcCcccCCCCCCcceeee----cCCCCccccCHHHHHHHHHHHhhCCC--CCCcEEEEecCC
Q 021854 215 EQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFE----EGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVNGE 287 (306)
Q Consensus 215 ~~aE~~l~~sgi~~tiiRPg~l~~~~~~~~~~~~~----~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~~~v~~g~ 287 (306)
+.....+...++.++.|.||.+............. .-......-.++|+|.++.+++.... -.|+++.++++.
T Consensus 368 ~~la~el~~~gi~v~~v~PG~i~t~~~~~~~~~~~~~~~~~~~l~~~~~p~dva~~~~~l~s~~~~~itG~~i~v~g~~ 446 (450)
T PRK08261 368 QALAPLLAERGITINAVAPGFIETQMTAAIPFATREAGRRMNSLQQGGLPVDVAETIAWLASPASGGVTGNVVRVCGQS 446 (450)
T ss_pred HHHHHHHhhhCcEEEEEEeCcCcchhhhccchhHHHHHhhcCCcCCCCCHHHHHHHHHHHhChhhcCCCCCEEEECCCc
Confidence 22223345579999999999865322111000000 00111223467999999999886432 357888887654
|
|
| >PRK08862 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.35 E-value=1.4e-11 Score=109.45 Aligned_cols=172 Identities=7% Similarity=0.017 Sum_probs=112.9
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh------cCCCceeeeccCCCHHHHHHHh-------c-
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTAL-------R- 162 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~~-------~- 162 (306)
.++++++||||+++||++++++|+++|++|+++.|+.++.++. .+..+..+.+|+.|.+++++++ .
T Consensus 3 ~~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 82 (227)
T PRK08862 3 IKSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFNR 82 (227)
T ss_pred CCCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 3578999999999999999999999999999999988764322 1345677889999998887655 3
Q ss_pred CccEEEEcCCc-----hh--------------------------hhccccc-CCCEEEEecCcccccCCCCcccccchHH
Q 021854 163 GVRSIICPSEG-----FI--------------------------SNAGSLK-GVQHVILLSQLSVYRGSGGIQALMKGNA 210 (306)
Q Consensus 163 ~~d~vi~~~~g-----~~--------------------------~~~a~~~-gvkr~V~iSS~~~~~~~~~~~~~~~~~a 210 (306)
.+|++|+++++ .+ .....+. +-.++|++||..+.. ....|..+++
T Consensus 83 ~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~---~~~~Y~asKa 159 (227)
T PRK08862 83 APDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISHDDHQ---DLTGVESSNA 159 (227)
T ss_pred CCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecCCCCC---CcchhHHHHH
Confidence 57999998431 10 0112222 246899999875432 2334544433
Q ss_pred HH--HHHHHHHHHHhcCCCEEEEEcCcccCCCCCCcceeeecCCCCccccC-HHHHHHHHHHHhhCCCCCCcEE
Q 021854 211 RK--LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLS-KEDAAFICVEALESIPQTGLIF 281 (306)
Q Consensus 211 ~~--~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~~~~~~~~g~~~~~~Is-~~DVA~~iv~aL~~~~~~g~~~ 281 (306)
.. +.+.....+...++++..|.||++...... ... .+.. .+|++.+..+++.++.-.|..+
T Consensus 160 al~~~~~~la~el~~~~Irvn~v~PG~i~t~~~~-~~~---------~~~~~~~~~~~~~~~l~~~~~~tg~~~ 223 (227)
T PRK08862 160 LVSGFTHSWAKELTPFNIRVGGVVPSIFSANGEL-DAV---------HWAEIQDELIRNTEYIVANEYFSGRVV 223 (227)
T ss_pred HHHHHHHHHHHHHhhcCcEEEEEecCcCcCCCcc-CHH---------HHHHHHHHHHhheeEEEecccccceEE
Confidence 21 222223335567899999999987644211 000 0111 2899999998887655555443
|
|
| >PRK06997 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.34 E-value=3.9e-11 Score=108.53 Aligned_cols=187 Identities=16% Similarity=0.117 Sum_probs=116.9
Q ss_pred CCCeEEEEcC--CChHHHHHHHHHHHCCCeEEEEecC---cchhhhh---cCCCceeeeccCCCHHHHHHHhc-------
Q 021854 98 ARDAVLVTDG--DSDIGQMVILSLIVKRTRIKALVKD---KRNAMES---FGTYVESMAGDASNKKFLKTALR------- 162 (306)
Q Consensus 98 ~~~~ilVtGa--tG~iG~~l~~~L~~~g~~V~~l~R~---~~~~~~~---~~~~v~~v~~D~~d~~~l~~~~~------- 162 (306)
.+++++|||| +++||++++++|+++|++|++..|. .+...+. .+ ....+.+|++|+++++++++
T Consensus 5 ~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g 83 (260)
T PRK06997 5 AGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFG-SDLVFPCDVASDEQIDALFASLGQHWD 83 (260)
T ss_pred CCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHHHHHHHHhcC-CcceeeccCCCHHHHHHHHHHHHHHhC
Confidence 4689999996 6799999999999999999987654 2222221 22 23468899999988877663
Q ss_pred CccEEEEcCCc---------hh--------------------------hhcccccCCCEEEEecCcccccCCCCcccccc
Q 021854 163 GVRSIICPSEG---------FI--------------------------SNAGSLKGVQHVILLSQLSVYRGSGGIQALMK 207 (306)
Q Consensus 163 ~~d~vi~~~~g---------~~--------------------------~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~ 207 (306)
.+|++|++++. ++ .... .+-+++|++||..+..+......|..
T Consensus 84 ~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m--~~~g~Ii~iss~~~~~~~~~~~~Y~a 161 (260)
T PRK06997 84 GLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPML--SDDASLLTLSYLGAERVVPNYNTMGL 161 (260)
T ss_pred CCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhc--CCCceEEEEeccccccCCCCcchHHH
Confidence 46999987321 00 0011 12368999999877655444445654
Q ss_pred hHHHH--HHHHHHHHHHhcCCCEEEEEcCcccCCCCCC----cce--eeecCCCCccccCHHHHHHHHHHHhhCCC--CC
Q 021854 208 GNARK--LAEQDESMLMASGIPYTIIRTGVLQNTPGGK----QGF--QFEEGCAANGSLSKEDAAFICVEALESIP--QT 277 (306)
Q Consensus 208 ~~a~~--~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~----~~~--~~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~ 277 (306)
+++.. +.+.....+...+|+++.|.||++....... ... .+........+..++|||+++..++..+. ..
T Consensus 162 sKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~~~~l~s~~~~~it 241 (260)
T PRK06997 162 AKASLEASVRYLAVSLGPKGIRANGISAGPIKTLAASGIKDFGKILDFVESNAPLRRNVTIEEVGNVAAFLLSDLASGVT 241 (260)
T ss_pred HHHHHHHHHHHHHHHhcccCeEEEEEeeCccccchhccccchhhHHHHHHhcCcccccCCHHHHHHHHHHHhCccccCcc
Confidence 43321 1122222234578999999999864321110 000 00001111235688999999999997643 45
Q ss_pred CcEEEEecCC
Q 021854 278 GLIFEVVNGE 287 (306)
Q Consensus 278 g~~~~v~~g~ 287 (306)
|+++.+.++.
T Consensus 242 G~~i~vdgg~ 251 (260)
T PRK06997 242 GEITHVDSGF 251 (260)
T ss_pred eeEEEEcCCh
Confidence 7888887664
|
|
| >PRK07984 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.34 E-value=4.8e-11 Score=108.26 Aligned_cols=190 Identities=12% Similarity=0.082 Sum_probs=119.3
Q ss_pred CCCeEEEEcCCC--hHHHHHHHHHHHCCCeEEEEecCcc---hhhhhc--CCCceeeeccCCCHHHHHHHhc-------C
Q 021854 98 ARDAVLVTDGDS--DIGQMVILSLIVKRTRIKALVKDKR---NAMESF--GTYVESMAGDASNKKFLKTALR-------G 163 (306)
Q Consensus 98 ~~~~ilVtGatG--~iG~~l~~~L~~~g~~V~~l~R~~~---~~~~~~--~~~v~~v~~D~~d~~~l~~~~~-------~ 163 (306)
.+++++||||++ +||++++++|+++|++|++..|+.. ..++.. ...+.++.+|++|.++++++++ .
T Consensus 5 ~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 84 (262)
T PRK07984 5 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVWPK 84 (262)
T ss_pred CCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecchhHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhcCC
Confidence 468999999985 8999999999999999999888731 122111 1245678899999988887663 4
Q ss_pred ccEEEEcCCc----------h---------------------hhhccc--ccCCCEEEEecCcccccCCCCcccccchHH
Q 021854 164 VRSIICPSEG----------F---------------------ISNAGS--LKGVQHVILLSQLSVYRGSGGIQALMKGNA 210 (306)
Q Consensus 164 ~d~vi~~~~g----------~---------------------~~~~a~--~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a 210 (306)
+|++|++++- . +..++. ...-.++|++||.+...+......|..+++
T Consensus 85 iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~iss~~~~~~~~~~~~Y~asKa 164 (262)
T PRK07984 85 FDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPNYNVMGLAKA 164 (262)
T ss_pred CCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcCCcEEEEEecCCCCCCCCCcchhHHHHH
Confidence 6999988431 0 000010 012258999999877655555555654433
Q ss_pred HH--HHHHHHHHHHhcCCCEEEEEcCcccCCCCCC-cc--eee---ecCCCCccccCHHHHHHHHHHHhhCCC--CCCcE
Q 021854 211 RK--LAEQDESMLMASGIPYTIIRTGVLQNTPGGK-QG--FQF---EEGCAANGSLSKEDAAFICVEALESIP--QTGLI 280 (306)
Q Consensus 211 ~~--~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~-~~--~~~---~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~ 280 (306)
.. +.+.....+...+|++..|.||++....... .. ... ........+..++|||.++++++.+.. ..|+.
T Consensus 165 al~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~~~~L~s~~~~~itG~~ 244 (262)
T PRK07984 165 SLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAAFLCSDLSAGISGEV 244 (262)
T ss_pred HHHHHHHHHHHHhcccCcEEeeeecCcccchHHhcCCchHHHHHHHHHcCCCcCCCCHHHHHHHHHHHcCcccccccCcE
Confidence 21 1222223344578999999999865321110 00 000 001112345688999999999987533 45778
Q ss_pred EEEecCC
Q 021854 281 FEVVNGE 287 (306)
Q Consensus 281 ~~v~~g~ 287 (306)
+.+.++-
T Consensus 245 i~vdgg~ 251 (262)
T PRK07984 245 VHVDGGF 251 (262)
T ss_pred EEECCCc
Confidence 8877663
|
|
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=99.34 E-value=4.6e-11 Score=122.02 Aligned_cols=184 Identities=10% Similarity=0.069 Sum_probs=115.5
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhc--CccEEEEcCCc
Q 021854 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--GVRSIICPSEG 173 (306)
Q Consensus 96 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~--~~d~vi~~~~g 173 (306)
..+.|+||||||+|+||+++++.|.++|++|.. ..+|++|.+.+...+. +.|+|||+++-
T Consensus 377 ~~~~mkiLVtGa~G~iG~~l~~~L~~~g~~v~~------------------~~~~l~d~~~v~~~i~~~~pd~Vih~Aa~ 438 (668)
T PLN02260 377 GKPSLKFLIYGRTGWIGGLLGKLCEKQGIAYEY------------------GKGRLEDRSSLLADIRNVKPTHVFNAAGV 438 (668)
T ss_pred CCCCceEEEECCCchHHHHHHHHHHhCCCeEEe------------------eccccccHHHHHHHHHhhCCCEEEECCcc
Confidence 335689999999999999999999999998731 1245788888888876 67999998321
Q ss_pred -----h--------------------hhhcccccCCCEEEEecCcccccCC-------C-Ccc---cc-cc-hHHHHHHH
Q 021854 174 -----F--------------------ISNAGSLKGVQHVILLSQLSVYRGS-------G-GIQ---AL-MK-GNARKLAE 215 (306)
Q Consensus 174 -----~--------------------~~~~a~~~gvkr~V~iSS~~~~~~~-------~-~~~---~~-~~-~~a~~~~~ 215 (306)
. ++++|++.+++ +|++||..++... . +.. .. .. +.+...|.
T Consensus 439 ~~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~g~~-~v~~Ss~~v~~~~~~~~~~~~~p~~E~~~~~~~~~~Yg~sK~ 517 (668)
T PLN02260 439 TGRPNVDWCESHKVETIRANVVGTLTLADVCRENGLL-MMNFATGCIFEYDAKHPEGSGIGFKEEDKPNFTGSFYSKTKA 517 (668)
T ss_pred cCCCCCChHHhCHHHHHHHHhHHHHHHHHHHHHcCCe-EEEEcccceecCCcccccccCCCCCcCCCCCCCCChhhHHHH
Confidence 0 34557778886 5667776654310 0 110 00 01 23445577
Q ss_pred HHHHHHHhcCCCEEEEEcCcccC-CCCCCccee---eecC---CCCccccCHHHHHHHHHHHhhCCCCCCcEEEEecCC-
Q 021854 216 QDESMLMASGIPYTIIRTGVLQN-TPGGKQGFQ---FEEG---CAANGSLSKEDAAFICVEALESIPQTGLIFEVVNGE- 287 (306)
Q Consensus 216 ~aE~~l~~sgi~~tiiRPg~l~~-~~~~~~~~~---~~~g---~~~~~~Is~~DVA~~iv~aL~~~~~~g~~~~v~~g~- 287 (306)
.+|.+++.. -++.++|+.+... .......+. +... ....+....+|++.+++.++.... +.+||++++.
T Consensus 518 ~~E~~~~~~-~~~~~~r~~~~~~~~~~~~~nfv~~~~~~~~~~~vp~~~~~~~~~~~~~~~l~~~~~--~giyni~~~~~ 594 (668)
T PLN02260 518 MVEELLREY-DNVCTLRVRMPISSDLSNPRNFITKISRYNKVVNIPNSMTVLDELLPISIEMAKRNL--RGIWNFTNPGV 594 (668)
T ss_pred HHHHHHHhh-hhheEEEEEEecccCCCCccHHHHHHhccceeeccCCCceehhhHHHHHHHHHHhCC--CceEEecCCCc
Confidence 888888764 3556666665331 111111110 0000 011345677888888788876422 4699999966
Q ss_pred cCHHHHHHHHHHHh
Q 021854 288 EKVSDWKKCFSRLM 301 (306)
Q Consensus 288 ~s~~d~~~l~~~l~ 301 (306)
.++.|+++.+.+..
T Consensus 595 ~s~~e~a~~i~~~~ 608 (668)
T PLN02260 595 VSHNEILEMYKDYI 608 (668)
T ss_pred CcHHHHHHHHHHhc
Confidence 68999988776654
|
|
| >TIGR01289 LPOR light-dependent protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=99.32 E-value=3.3e-11 Score=112.08 Aligned_cols=74 Identities=15% Similarity=0.231 Sum_probs=60.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCC-CeEEEEecCcchhhhh---c---CCCceeeeccCCCHHHHHHHh-------cC
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAMES---F---GTYVESMAGDASNKKFLKTAL-------RG 163 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~l~R~~~~~~~~---~---~~~v~~v~~D~~d~~~l~~~~-------~~ 163 (306)
|+++++||||+++||.+++++|+++| ++|++++|+.++..+. . +..+.++.+|++|.+++++++ ..
T Consensus 2 ~~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~ 81 (314)
T TIGR01289 2 QKPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGRP 81 (314)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence 57899999999999999999999999 9999999988653221 1 235778899999998877665 34
Q ss_pred ccEEEEcC
Q 021854 164 VRSIICPS 171 (306)
Q Consensus 164 ~d~vi~~~ 171 (306)
+|++|+++
T Consensus 82 iD~lI~nA 89 (314)
T TIGR01289 82 LDALVCNA 89 (314)
T ss_pred CCEEEECC
Confidence 79999874
|
This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form. |
| >PRK08177 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.31 E-value=1.7e-10 Score=101.68 Aligned_cols=165 Identities=14% Similarity=0.100 Sum_probs=105.3
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcC-CCceeeeccCCCHHHHHHHhc-----CccEEEEcCCc
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG-TYVESMAGDASNKKFLKTALR-----GVRSIICPSEG 173 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~-~~v~~v~~D~~d~~~l~~~~~-----~~d~vi~~~~g 173 (306)
++++||||+|+||++++++|++.|++|++++|+++...+... .++.++.+|++|.++++++++ ++|+|||+++.
T Consensus 2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~id~vi~~ag~ 81 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQALPGVHIEKLDMNDPASLDQLLQRLQGQRFDLLFVNAGI 81 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHHhccccceEEcCCCCHHHHHHHHHHhhcCCCCEEEEcCcc
Confidence 689999999999999999999999999999999876432211 357788999999988877665 47999998321
Q ss_pred h----------------------------hhhccc---ccCCCEEEEecCcccccC---CCCcccccchHHHHH--HHHH
Q 021854 174 F----------------------------ISNAGS---LKGVQHVILLSQLSVYRG---SGGIQALMKGNARKL--AEQD 217 (306)
Q Consensus 174 ~----------------------------~~~~a~---~~gvkr~V~iSS~~~~~~---~~~~~~~~~~~a~~~--~~~a 217 (306)
. +...+. +.+..+++++||..+..+ ......|..+++... .+..
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~ss~~g~~~~~~~~~~~~Y~~sK~a~~~~~~~l 161 (225)
T PRK08177 82 SGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPGQGVLAFMSSQLGSVELPDGGEMPLYKASKAALNSMTRSF 161 (225)
T ss_pred cCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhcCCEEEEEccCccccccCCCCCccchHHHHHHHHHHHHHH
Confidence 0 001111 123367888988654432 122334543322111 1111
Q ss_pred HHHHHhcCCCEEEEEcCcccCCCCCCcceeeecCCCCccccCHHHHHHHHHHHhhCCC
Q 021854 218 ESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIP 275 (306)
Q Consensus 218 E~~l~~sgi~~tiiRPg~l~~~~~~~~~~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~ 275 (306)
...+...++.++.|+||++....... ..+++.+..++.++..+++..
T Consensus 162 ~~e~~~~~i~v~~i~PG~i~t~~~~~-----------~~~~~~~~~~~~~~~~~~~~~ 208 (225)
T PRK08177 162 VAELGEPTLTVLSMHPGWVKTDMGGD-----------NAPLDVETSVKGLVEQIEAAS 208 (225)
T ss_pred HHHhhcCCeEEEEEcCCceecCCCCC-----------CCCCCHHHHHHHHHHHHHhCC
Confidence 12233468999999999875332110 123566777777777776554
|
|
| >PRK07889 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.31 E-value=8.5e-11 Score=106.03 Aligned_cols=187 Identities=16% Similarity=0.105 Sum_probs=115.2
Q ss_pred CCCeEEEEcC--CChHHHHHHHHHHHCCCeEEEEecCc--chhh---hhcCCCceeeeccCCCHHHHHHHhc-------C
Q 021854 98 ARDAVLVTDG--DSDIGQMVILSLIVKRTRIKALVKDK--RNAM---ESFGTYVESMAGDASNKKFLKTALR-------G 163 (306)
Q Consensus 98 ~~~~ilVtGa--tG~iG~~l~~~L~~~g~~V~~l~R~~--~~~~---~~~~~~v~~v~~D~~d~~~l~~~~~-------~ 163 (306)
.+++++|||| +++||.+++++|+++|++|++..|+. +... +..+..+.++.+|++|.++++++++ .
T Consensus 6 ~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~ 85 (256)
T PRK07889 6 EGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRLPEPAPVLELDVTNEEHLASLADRVREHVDG 85 (256)
T ss_pred cCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhcCCCCcEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence 4689999999 89999999999999999999998764 2211 2233457789999999988776653 4
Q ss_pred ccEEEEcCCc---------h-------------------------hhhcccccCCCEEEEecCcccccCCCCcccccchH
Q 021854 164 VRSIICPSEG---------F-------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGN 209 (306)
Q Consensus 164 ~d~vi~~~~g---------~-------------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~ 209 (306)
+|++|++++. + +...++ .-.++|++|+... .+......|..++
T Consensus 86 iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~--~~g~Iv~is~~~~-~~~~~~~~Y~asK 162 (256)
T PRK07889 86 LDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMN--EGGSIVGLDFDAT-VAWPAYDWMGVAK 162 (256)
T ss_pred CcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhcc--cCceEEEEeeccc-ccCCccchhHHHH
Confidence 7999987321 0 001112 2257999886532 2222222343333
Q ss_pred HH--HHHHHHHHHHHhcCCCEEEEEcCcccCCCCCC-cc---e--eeecCCCCc-cccCHHHHHHHHHHHhhCCC--CCC
Q 021854 210 AR--KLAEQDESMLMASGIPYTIIRTGVLQNTPGGK-QG---F--QFEEGCAAN-GSLSKEDAAFICVEALESIP--QTG 278 (306)
Q Consensus 210 a~--~~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~-~~---~--~~~~g~~~~-~~Is~~DVA~~iv~aL~~~~--~~g 278 (306)
+. .+.+.....+...||+++.|.||++....... .. . .+....... .+.+++|||+++++++.+.. ..|
T Consensus 163 aal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~~~~~~p~evA~~v~~l~s~~~~~~tG 242 (256)
T PRK07889 163 AALESTNRYLARDLGPRGIRVNLVAAGPIRTLAAKAIPGFELLEEGWDERAPLGWDVKDPTPVARAVVALLSDWFPATTG 242 (256)
T ss_pred HHHHHHHHHHHHHhhhcCeEEEeeccCcccChhhhcccCcHHHHHHHHhcCccccccCCHHHHHHHHHHHhCcccccccc
Confidence 22 12222223345678999999999865321110 00 0 000001111 35789999999999997643 357
Q ss_pred cEEEEecCC
Q 021854 279 LIFEVVNGE 287 (306)
Q Consensus 279 ~~~~v~~g~ 287 (306)
+++.+.++.
T Consensus 243 ~~i~vdgg~ 251 (256)
T PRK07889 243 EIVHVDGGA 251 (256)
T ss_pred eEEEEcCce
Confidence 778777653
|
|
| >PRK08303 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.31 E-value=1.7e-10 Score=107.10 Aligned_cols=185 Identities=10% Similarity=-0.024 Sum_probs=112.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcc----------hhhh------hcCCCceeeeccCCCHHHHHHHh
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR----------NAME------SFGTYVESMAGDASNKKFLKTAL 161 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~----------~~~~------~~~~~v~~v~~D~~d~~~l~~~~ 161 (306)
.+|+++||||+++||++++++|++.|++|+++.|+.+ +..+ ..+..+.++.+|++|.+++++++
T Consensus 7 ~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~ 86 (305)
T PRK08303 7 RGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVRALV 86 (305)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHH
Confidence 4799999999999999999999999999999999742 2111 11335678899999998887665
Q ss_pred c-------CccEEEEcC-Cc--------hh--------------------------hhcccccCCCEEEEecCccccc-C
Q 021854 162 R-------GVRSIICPS-EG--------FI--------------------------SNAGSLKGVQHVILLSQLSVYR-G 198 (306)
Q Consensus 162 ~-------~~d~vi~~~-~g--------~~--------------------------~~~a~~~gvkr~V~iSS~~~~~-~ 198 (306)
+ .+|++|+++ +. .+ ...+.+.+-.+||++||..+.. .
T Consensus 87 ~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~~g~IV~isS~~~~~~~ 166 (305)
T PRK08303 87 ERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRPGGLVVEITDGTAEYNA 166 (305)
T ss_pred HHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCCCcEEEEECCccccccC
Confidence 3 469999875 31 00 0112223346899999865432 1
Q ss_pred --CCCcccccchHHHH--HHHHHHHHHHhcCCCEEEEEcCcccCCCC------CCccee-eecCCC-CccccCHHHHHHH
Q 021854 199 --SGGIQALMKGNARK--LAEQDESMLMASGIPYTIIRTGVLQNTPG------GKQGFQ-FEEGCA-ANGSLSKEDAAFI 266 (306)
Q Consensus 199 --~~~~~~~~~~~a~~--~~~~aE~~l~~sgi~~tiiRPg~l~~~~~------~~~~~~-~~~g~~-~~~~Is~~DVA~~ 266 (306)
......|..+++.- +.+.....+...+|++..|.||++..... ...... ...... .....+++|+|.+
T Consensus 167 ~~~~~~~~Y~asKaal~~lt~~La~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~p~~~~~~~peevA~~ 246 (305)
T PRK08303 167 THYRLSVFYDLAKTSVNRLAFSLAHELAPHGATAVALTPGWLRSEMMLDAFGVTEENWRDALAKEPHFAISETPRYVGRA 246 (305)
T ss_pred cCCCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEecCCccccHHHHHhhccCccchhhhhccccccccCCCHHHHHHH
Confidence 11233454433321 11222233445789999999998643210 000000 000001 1123468999999
Q ss_pred HHHHhhCCC---CCCcEEE
Q 021854 267 CVEALESIP---QTGLIFE 282 (306)
Q Consensus 267 iv~aL~~~~---~~g~~~~ 282 (306)
++.++.++. ..|+.+.
T Consensus 247 v~fL~s~~~~~~itG~~l~ 265 (305)
T PRK08303 247 VAALAADPDVARWNGQSLS 265 (305)
T ss_pred HHHHHcCcchhhcCCcEEE
Confidence 999997653 2455443
|
|
| >PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.30 E-value=1.6e-10 Score=110.99 Aligned_cols=164 Identities=11% Similarity=0.011 Sum_probs=104.1
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhc---CCCceeeeccCCCHHHHHHHhcCccEEEEcCC
Q 021854 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF---GTYVESMAGDASNKKFLKTALRGVRSIICPSE 172 (306)
Q Consensus 96 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~---~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~ 172 (306)
..++|+|+||||+|+||++++++|+++|++|+++.|+.++..... ...+..+.+|++|.+++.+.+.++|++|++++
T Consensus 175 sl~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd~~~v~~~l~~IDiLInnAG 254 (406)
T PRK07424 175 SLKGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEINGEDLPVKTLHWQVGQEAALAELLEKVDILIINHG 254 (406)
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCCHHHHHHHhCCCCEEEECCC
Confidence 345789999999999999999999999999999999876643222 22467888999999999999999999998743
Q ss_pred ch-----------------------hhh----cccccC----CCEEEEecCcccccCCCCcccccchHHHHHHHHHHHHH
Q 021854 173 GF-----------------------ISN----AGSLKG----VQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESML 221 (306)
Q Consensus 173 g~-----------------------~~~----~a~~~g----vkr~V~iSS~~~~~~~~~~~~~~~~~a~~~~~~aE~~l 221 (306)
.. +.+ .+++.+ -..+|++|+ +...+ .....|..+++.- .......
T Consensus 255 i~~~~~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~~~~~~iiVn~Ss-a~~~~-~~~~~Y~ASKaAl--~~l~~l~ 330 (406)
T PRK07424 255 INVHGERTPEAINKSYEVNTFSAWRLMELFFTTVKTNRDKATKEVWVNTSE-AEVNP-AFSPLYELSKRAL--GDLVTLR 330 (406)
T ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEcc-ccccC-CCchHHHHHHHHH--HHHHHHH
Confidence 10 111 122222 123455554 22222 2223354433221 1111111
Q ss_pred H-hcCCCEEEEEcCcccCCCCCCcceeeecCCCCccccCHHHHHHHHHHHhhCCC
Q 021854 222 M-ASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIP 275 (306)
Q Consensus 222 ~-~sgi~~tiiRPg~l~~~~~~~~~~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~ 275 (306)
+ ..++.+..+.||.+.... .....+++||+|+.++.++..+.
T Consensus 331 ~~~~~~~I~~i~~gp~~t~~------------~~~~~~spe~vA~~il~~i~~~~ 373 (406)
T PRK07424 331 RLDAPCVVRKLILGPFKSNL------------NPIGVMSADWVAKQILKLAKRDF 373 (406)
T ss_pred HhCCCCceEEEEeCCCcCCC------------CcCCCCCHHHHHHHHHHHHHCCC
Confidence 1 245666667777643221 01235899999999999997654
|
|
| >PRK05854 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.30 E-value=4e-11 Score=111.52 Aligned_cols=184 Identities=14% Similarity=0.076 Sum_probs=111.1
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh-------cC-CCceeeeccCCCHHHHHHHhc------
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------FG-TYVESMAGDASNKKFLKTALR------ 162 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~-------~~-~~v~~v~~D~~d~~~l~~~~~------ 162 (306)
..+++++||||+++||.+++++|+++|++|++++|+.++..+. .+ .++.++.+|+.|.++++++++
T Consensus 12 l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~~~ 91 (313)
T PRK05854 12 LSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRAEG 91 (313)
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHHhC
Confidence 4579999999999999999999999999999999998763221 12 357889999999988877654
Q ss_pred -CccEEEEcCCch-----------------------------hhhcccccCCCEEEEecCcccccCC------------C
Q 021854 163 -GVRSIICPSEGF-----------------------------ISNAGSLKGVQHVILLSQLSVYRGS------------G 200 (306)
Q Consensus 163 -~~d~vi~~~~g~-----------------------------~~~~a~~~gvkr~V~iSS~~~~~~~------------~ 200 (306)
.+|++||+++.. +...++ .+..++|++||.....+. .
T Consensus 92 ~~iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~-~~~~riv~vsS~~~~~~~~~~~~~~~~~~~~ 170 (313)
T PRK05854 92 RPIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLR-AGRARVTSQSSIAARRGAINWDDLNWERSYA 170 (313)
T ss_pred CCccEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHH-hCCCCeEEEechhhcCCCcCcccccccccCc
Confidence 379999884310 011112 234689999998654321 1
Q ss_pred CcccccchHHHHHHHHHHHH-----HHhcCCCEEEEEcCcccCCCCCCcce-------ee-e--c--CCCCccccCHHHH
Q 021854 201 GIQALMKGNARKLAEQDESM-----LMASGIPYTIIRTGVLQNTPGGKQGF-------QF-E--E--GCAANGSLSKEDA 263 (306)
Q Consensus 201 ~~~~~~~~~a~~~~~~aE~~-----l~~sgi~~tiiRPg~l~~~~~~~~~~-------~~-~--~--g~~~~~~Is~~DV 263 (306)
+...|..++...... +..+ ....++.++.+.||++.......... .+ . . .....-.-+.++-
T Consensus 171 ~~~~Y~~SK~a~~~~-~~~la~~~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 249 (313)
T PRK05854 171 GMRAYSQSKIAVGLF-ALELDRRSRAAGWGITSNLAHPGVAPTNLLAARPEVGRDKDTLMVRLIRSLSARGFLVGTVESA 249 (313)
T ss_pred chhhhHHHHHHHHHH-HHHHHHHhhcCCCCeEEEEEecceeccCccccccccccchhHHHHHHHHHHhhcccccCCHHHH
Confidence 222343333221111 1111 11257999999999865332111000 00 0 0 0000112367888
Q ss_pred HHHHHHHhhCCCC-CCcEEE
Q 021854 264 AFICVEALESIPQ-TGLIFE 282 (306)
Q Consensus 264 A~~iv~aL~~~~~-~g~~~~ 282 (306)
|...+.+...+.. .|..|.
T Consensus 250 a~~~l~~a~~~~~~~g~~~~ 269 (313)
T PRK05854 250 ILPALYAATSPDAEGGAFYG 269 (313)
T ss_pred HHHhhheeeCCCCCCCcEEC
Confidence 8888887776653 344443
|
|
| >KOG4288 consensus Predicted oxidoreductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.30 E-value=8e-12 Score=108.68 Aligned_cols=175 Identities=18% Similarity=0.159 Sum_probs=128.1
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcch-hhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcCCch---
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-AMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEGF--- 174 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~-~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~g~--- 174 (306)
..+.++.|+.|+.|.++++.....++.|..+.|+..+ ..+..+..+.+..+|.....-+...+.+...++.+++++
T Consensus 52 ~e~tlvlggnpfsgs~vlk~A~~vv~svgilsen~~k~~l~sw~~~vswh~gnsfssn~~k~~l~g~t~v~e~~ggfgn~ 131 (283)
T KOG4288|consen 52 VEWTLVLGGNPFSGSEVLKNATNVVHSVGILSENENKQTLSSWPTYVSWHRGNSFSSNPNKLKLSGPTFVYEMMGGFGNI 131 (283)
T ss_pred HHHHhhhcCCCcchHHHHHHHHhhceeeeEeecccCcchhhCCCcccchhhccccccCcchhhhcCCcccHHHhcCccch
Confidence 5789999999999999999999999999999999865 444566788989988876555666677777777664433
Q ss_pred -------------hhhcccccCCCEEEEecCcccccCCCCcccccchHHHHHHHHHHHHHHh-cCCCEEEEEcCcccCCC
Q 021854 175 -------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMA-SGIPYTIIRTGVLQNTP 240 (306)
Q Consensus 175 -------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~~~~~aE~~l~~-sgi~~tiiRPg~l~~~~ 240 (306)
...++.++||++|+|||.....-++.-+..|.. -||++|..|.. .+.+-+|+|||++.+..
T Consensus 132 ~~m~~ing~ani~a~kaa~~~gv~~fvyISa~d~~~~~~i~rGY~~-----gKR~AE~Ell~~~~~rgiilRPGFiyg~R 206 (283)
T KOG4288|consen 132 ILMDRINGTANINAVKAAAKAGVPRFVYISAHDFGLPPLIPRGYIE-----GKREAEAELLKKFRFRGIILRPGFIYGTR 206 (283)
T ss_pred HHHHHhccHhhHHHHHHHHHcCCceEEEEEhhhcCCCCccchhhhc-----cchHHHHHHHHhcCCCceeeccceeeccc
Confidence 234577899999999998765333333444544 37888877764 57888999999987553
Q ss_pred CCCcce----------------------ee-ecCCCCccccCHHHHHHHHHHHhhCCCCCC
Q 021854 241 GGKQGF----------------------QF-EEGCAANGSLSKEDAAFICVEALESIPQTG 278 (306)
Q Consensus 241 ~~~~~~----------------------~~-~~g~~~~~~Is~~DVA~~iv~aL~~~~~~g 278 (306)
.-+... .+ -.+.....++..++||.+++.++++|...|
T Consensus 207 ~v~g~~~pL~~vg~pl~~~~~~a~k~~~kLp~lg~l~~ppvnve~VA~aal~ai~dp~f~G 267 (283)
T KOG4288|consen 207 NVGGIKSPLHTVGEPLEMVLKFALKPLNKLPLLGPLLAPPVNVESVALAALKAIEDPDFKG 267 (283)
T ss_pred ccCcccccHHhhhhhHHHHHHhhhchhhcCcccccccCCCcCHHHHHHHHHHhccCCCcCc
Confidence 211000 00 133344677899999999999999998764
|
|
| >smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=99.24 E-value=1.5e-10 Score=96.53 Aligned_cols=135 Identities=20% Similarity=0.254 Sum_probs=94.4
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCC-eEEEEecCcchhhh---------hcCCCceeeeccCCCHHHHHHHhcC------
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAME---------SFGTYVESMAGDASNKKFLKTALRG------ 163 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~g~-~V~~l~R~~~~~~~---------~~~~~v~~v~~D~~d~~~l~~~~~~------ 163 (306)
++++||||+|+||.+++++|+++|+ .|+++.|+.+.... ..+.++.++.+|+++.+.++++++.
T Consensus 1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 80 (180)
T smart00822 1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEALGAEVTVVACDVADRAALAAALAAIPARLG 80 (180)
T ss_pred CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 5799999999999999999999996 68888887654211 1234677889999998887776543
Q ss_pred -ccEEEEcCCc-----h---------------------hhhcccccCCCEEEEecCcccccCCCCcccccchHHHHHHHH
Q 021854 164 -VRSIICPSEG-----F---------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQ 216 (306)
Q Consensus 164 -~d~vi~~~~g-----~---------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~~~~~ 216 (306)
+|++||+++. . +.+++...+.+++|++||..+..+......|..++ ...+.
T Consensus 81 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ii~~ss~~~~~~~~~~~~y~~sk--~~~~~ 158 (180)
T smart00822 81 PLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRDLPLDFFVLFSSVAGVLGNPGQANYAAAN--AFLDA 158 (180)
T ss_pred CeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhccCCcceEEEEccHHHhcCCCCchhhHHHH--HHHHH
Confidence 5999987431 0 22334556778999999987766555555554332 22222
Q ss_pred HHHHHHhcCCCEEEEEcCcc
Q 021854 217 DESMLMASGIPYTIIRTGVL 236 (306)
Q Consensus 217 aE~~l~~sgi~~tiiRPg~l 236 (306)
.-..++..+++++.++||..
T Consensus 159 ~~~~~~~~~~~~~~~~~g~~ 178 (180)
T smart00822 159 LAAHRRARGLPATSINWGAW 178 (180)
T ss_pred HHHHHHhcCCceEEEeeccc
Confidence 22445668999999999875
|
It uses NADPH to reduce the keto group to a hydroxy group. |
| >KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.23 E-value=6.9e-10 Score=106.97 Aligned_cols=203 Identities=18% Similarity=0.244 Sum_probs=130.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCC---CeEEEEecCcchh------h------------hhcC---CCceeeeccCCC
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKR---TRIKALVKDKRNA------M------------ESFG---TYVESMAGDASN 153 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g---~~V~~l~R~~~~~------~------------~~~~---~~v~~v~~D~~d 153 (306)
.+|+|+|||||||+|+.+++.|++.- -++.++.|..... . +..+ .++..+.||+.+
T Consensus 11 ~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi~~ 90 (467)
T KOG1221|consen 11 KNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDISE 90 (467)
T ss_pred CCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceeccccccC
Confidence 47999999999999999999999754 3788888877541 0 0111 467788999985
Q ss_pred ------HHHHHHHhcCccEEEEcCCch-------------------hhhcccc-cCCCEEEEecCcccccCCC-------
Q 021854 154 ------KKFLKTALRGVRSIICPSEGF-------------------ISNAGSL-KGVQHVILLSQLSVYRGSG------- 200 (306)
Q Consensus 154 ------~~~l~~~~~~~d~vi~~~~g~-------------------~~~~a~~-~gvkr~V~iSS~~~~~~~~------- 200 (306)
..++....+.+|+|||+++.. +.++|++ .+.+-+|++|+..+.....
T Consensus 91 ~~LGis~~D~~~l~~eV~ivih~AAtvrFde~l~~al~iNt~Gt~~~l~lak~~~~l~~~vhVSTAy~n~~~~~i~E~~y 170 (467)
T KOG1221|consen 91 PDLGISESDLRTLADEVNIVIHSAATVRFDEPLDVALGINTRGTRNVLQLAKEMVKLKALVHVSTAYSNCNVGHIEEKPY 170 (467)
T ss_pred cccCCChHHHHHHHhcCCEEEEeeeeeccchhhhhhhhhhhHhHHHHHHHHHHhhhhheEEEeehhheeccccccccccc
Confidence 355667788999999985521 3344544 4678899999976642100
Q ss_pred Cccc----c-------------c-----------chHHHHHHHHHHHHHHh--cCCCEEEEEcCcccCC-----CC----
Q 021854 201 GIQA----L-------------M-----------KGNARKLAEQDESMLMA--SGIPYTIIRTGVLQNT-----PG---- 241 (306)
Q Consensus 201 ~~~~----~-------------~-----------~~~a~~~~~~aE~~l~~--sgi~~tiiRPg~l~~~-----~~---- 241 (306)
++.. . . +..+.-.|..+|..+.+ .++|.+||||+.+... ++
T Consensus 171 ~~~~~~~~~~~i~~~~~~~~~~ld~~~~~l~~~~PNTYtfTKal~E~~i~~~~~~lPivIiRPsiI~st~~EP~pGWidn 250 (467)
T KOG1221|consen 171 PMPETCNPEKILKLDENLSDELLDQKAPKLLGGWPNTYTFTKALAEMVIQKEAENLPLVIIRPSIITSTYKEPFPGWIDN 250 (467)
T ss_pred CccccCCHHHHHhhhccchHHHHHHhhHHhcCCCCCceeehHhhHHHHHHhhccCCCeEEEcCCceeccccCCCCCcccc
Confidence 0000 0 0 00011124567777765 5899999999985421 11
Q ss_pred --CCcceeee-----------cCCCCccccCHHHHHHHHHHHhhC-----CCCCCcEEEEecCCc---CHHHHHHHHHHH
Q 021854 242 --GKQGFQFE-----------EGCAANGSLSKEDAAFICVEALES-----IPQTGLIFEVVNGEE---KVSDWKKCFSRL 300 (306)
Q Consensus 242 --~~~~~~~~-----------~g~~~~~~Is~~DVA~~iv~aL~~-----~~~~g~~~~v~~g~~---s~~d~~~l~~~l 300 (306)
+..++.++ ..+.....|++|.|+.+++.+.-. +.....+|+++++.. ++.++.++....
T Consensus 251 ~~gp~g~i~g~gkGvlr~~~~d~~~~adiIPvD~vvN~~ia~~~~~~~~~~~~~~~IY~~tss~~Np~t~~~~~e~~~~~ 330 (467)
T KOG1221|consen 251 LNGPDGVIIGYGKGVLRCFLVDPKAVADIIPVDMVVNAMIASAWQHAGNSKEKTPPIYHLTSSNDNPVTWGDFIELALRY 330 (467)
T ss_pred CCCCceEEEEeccceEEEEEEccccccceeeHHHHHHHHHHHHHHHhccCCCCCCcEEEecccccCcccHHHHHHHHHHh
Confidence 11222222 334446789999999999876621 112356999999653 677777766554
|
|
| >KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.23 E-value=5.6e-11 Score=99.63 Aligned_cols=135 Identities=19% Similarity=0.204 Sum_probs=102.6
Q ss_pred CccCCCeEEEEcCCChHHHHHHHHHHHCC--CeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcCC
Q 021854 95 PEEARDAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE 172 (306)
Q Consensus 95 ~~~~~~~ilVtGatG~iG~~l~~~L~~~g--~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~ 172 (306)
....++..+|.||||-+|+.+++.++..+ -+|+++.|.... .......+..+..|+...+++...+++.|+.||+-+
T Consensus 14 f~mq~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~-d~at~k~v~q~~vDf~Kl~~~a~~~qg~dV~FcaLg 92 (238)
T KOG4039|consen 14 FRMQNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELP-DPATDKVVAQVEVDFSKLSQLATNEQGPDVLFCALG 92 (238)
T ss_pred HhhhccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCC-CccccceeeeEEechHHHHHHHhhhcCCceEEEeec
Confidence 34457899999999999999999999988 389999988622 111234677788899888999999999999999811
Q ss_pred ---------ch----------hhhcccccCCCEEEEecCcccccCCCCcccccchHHHHHHHHHHHHHHhcCC-CEEEEE
Q 021854 173 ---------GF----------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMASGI-PYTIIR 232 (306)
Q Consensus 173 ---------g~----------~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~~~~~aE~~l~~sgi-~~tiiR 232 (306)
++ .+.++++.|+++||++||.++...+.-. |+. .|-+.|.-+.+-++ .++|+|
T Consensus 93 TTRgkaGadgfykvDhDyvl~~A~~AKe~Gck~fvLvSS~GAd~sSrFl--Y~k-----~KGEvE~~v~eL~F~~~~i~R 165 (238)
T KOG4039|consen 93 TTRGKAGADGFYKVDHDYVLQLAQAAKEKGCKTFVLVSSAGADPSSRFL--YMK-----MKGEVERDVIELDFKHIIILR 165 (238)
T ss_pred ccccccccCceEeechHHHHHHHHHHHhCCCeEEEEEeccCCCccccee--eee-----ccchhhhhhhhccccEEEEec
Confidence 22 4567788999999999999987655443 322 34466666766665 588999
Q ss_pred cCccc
Q 021854 233 TGVLQ 237 (306)
Q Consensus 233 Pg~l~ 237 (306)
||.+.
T Consensus 166 PG~ll 170 (238)
T KOG4039|consen 166 PGPLL 170 (238)
T ss_pred Cccee
Confidence 99965
|
|
| >PLN00015 protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=99.21 E-value=1.8e-10 Score=106.87 Aligned_cols=69 Identities=13% Similarity=0.155 Sum_probs=56.1
Q ss_pred EEEcCCChHHHHHHHHHHHCC-CeEEEEecCcchhhhh---c---CCCceeeeccCCCHHHHHHHhc-------CccEEE
Q 021854 103 LVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAMES---F---GTYVESMAGDASNKKFLKTALR-------GVRSII 168 (306)
Q Consensus 103 lVtGatG~iG~~l~~~L~~~g-~~V~~l~R~~~~~~~~---~---~~~v~~v~~D~~d~~~l~~~~~-------~~d~vi 168 (306)
+||||+++||.+++++|+++| ++|++.+|+.++..+. . +..+.++.+|++|.++++++++ .+|++|
T Consensus 1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~lI 80 (308)
T PLN00015 1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDVLV 80 (308)
T ss_pred CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCEEE
Confidence 699999999999999999999 9999999987653321 1 2357788999999988877653 469999
Q ss_pred EcC
Q 021854 169 CPS 171 (306)
Q Consensus 169 ~~~ 171 (306)
+++
T Consensus 81 nnA 83 (308)
T PLN00015 81 CNA 83 (308)
T ss_pred ECC
Confidence 874
|
|
| >KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.19 E-value=1.8e-10 Score=98.02 Aligned_cols=190 Identities=16% Similarity=0.150 Sum_probs=123.2
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh---cC--CCceeeeccCCCHHHHHHHhc-------Cc
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FG--TYVESMAGDASNKKFLKTALR-------GV 164 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~---~~--~~v~~v~~D~~d~~~l~~~~~-------~~ 164 (306)
.+.+..+||||+.+||+++++.|++.|++|.+..++...+++. ++ .+-..+.+|+++.++++..++ ..
T Consensus 12 ~~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~~g~p 91 (256)
T KOG1200|consen 12 LMSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKSLGTP 91 (256)
T ss_pred HhcceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHHhcCCC
Confidence 4578999999999999999999999999999998887654332 22 245578999999877666554 34
Q ss_pred cEEEEcCC----chh----------------------hhcc------cccCCCEEEEecCcccccCCCCcccccchHH--
Q 021854 165 RSIICPSE----GFI----------------------SNAG------SLKGVQHVILLSQLSVYRGSGGIQALMKGNA-- 210 (306)
Q Consensus 165 d~vi~~~~----g~~----------------------~~~a------~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a-- 210 (306)
+++++|++ +++ ..++ .+.+--++|.+||.-..-++.+...|..++.
T Consensus 92 svlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVGkiGN~GQtnYAAsK~Gv 171 (256)
T KOG1200|consen 92 SVLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVGKIGNFGQTNYAASKGGV 171 (256)
T ss_pred cEEEEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhhcccccccchhhhhhcCce
Confidence 88998744 110 1111 1122338999999877666656555544322
Q ss_pred HHHHHHHHHHHHhcCCCEEEEEcCcccCCCCCCcce-ee---ecCCCCccccCHHHHHHHHHHHhhCCC--CCCcEEEEe
Q 021854 211 RKLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGF-QF---EEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVV 284 (306)
Q Consensus 211 ~~~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~~~~-~~---~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~~~v~ 284 (306)
-.+.+.+.+.+...+|++..+-||++.......-+. .+ ...-...-+=..||||..+.++..+.. -.|.+++|+
T Consensus 172 IgftktaArEla~knIrvN~VlPGFI~tpMT~~mp~~v~~ki~~~iPmgr~G~~EevA~~V~fLAS~~ssYiTG~t~evt 251 (256)
T KOG1200|consen 172 IGFTKTAARELARKNIRVNVVLPGFIATPMTEAMPPKVLDKILGMIPMGRLGEAEEVANLVLFLASDASSYITGTTLEVT 251 (256)
T ss_pred eeeeHHHHHHHhhcCceEeEeccccccChhhhhcCHHHHHHHHccCCccccCCHHHHHHHHHHHhccccccccceeEEEe
Confidence 112234445677899999999999976433211110 00 011111112245999999998885443 358899998
Q ss_pred cC
Q 021854 285 NG 286 (306)
Q Consensus 285 ~g 286 (306)
+|
T Consensus 252 GG 253 (256)
T KOG1200|consen 252 GG 253 (256)
T ss_pred cc
Confidence 76
|
|
| >KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.19 E-value=5.2e-10 Score=101.73 Aligned_cols=168 Identities=12% Similarity=0.019 Sum_probs=116.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhh-------hhcCCCceeeeccCCC----HHHHHHHhcCccE
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM-------ESFGTYVESMAGDASN----KKFLKTALRGVRS 166 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~-------~~~~~~v~~v~~D~~d----~~~l~~~~~~~d~ 166 (306)
.+++.+|||||++||++.+++|+++|++|++++|+++|+. +..+..++++..|+++ ++.+++.+.+.|+
T Consensus 48 ~g~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~~~V 127 (312)
T KOG1014|consen 48 LGSWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAGLDV 127 (312)
T ss_pred cCCEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHhcCCce
Confidence 4599999999999999999999999999999999999843 2344578899999985 4567777888876
Q ss_pred EEEc--CC------ch--------------------------hhhcccccCCCEEEEecCcccccCCCCcccccchHHHH
Q 021854 167 IICP--SE------GF--------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK 212 (306)
Q Consensus 167 vi~~--~~------g~--------------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~ 212 (306)
-|+. ++ .. +..-+.+.+-.-+|++||.+...+.+....|..+++.-
T Consensus 128 gILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G~IvnigS~ag~~p~p~~s~ysasK~~v 207 (312)
T KOG1014|consen 128 GILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERKKGIIVNIGSFAGLIPTPLLSVYSASKAFV 207 (312)
T ss_pred EEEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCCCceEEEeccccccccChhHHHHHHHHHHH
Confidence 6543 22 00 01113345566799999999888877777776554321
Q ss_pred --HHHHHHHHHHhcCCCEEEEEcCcccCCCCCCcceeeecCCCCccccCHHHHHHHHHHHhh
Q 021854 213 --LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALE 272 (306)
Q Consensus 213 --~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~~~~~~~~g~~~~~~Is~~DVA~~iv~aL~ 272 (306)
+........+..||.+-.+-|..+......... ......+.+..|+-.+..+.
T Consensus 208 ~~~S~~L~~Ey~~~gI~Vq~v~p~~VaTkm~~~~~-------~sl~~ps~~tfaksal~tiG 262 (312)
T KOG1014|consen 208 DFFSRCLQKEYESKGIFVQSVIPYLVATKMAKYRK-------PSLFVPSPETFAKSALNTIG 262 (312)
T ss_pred HHHHHHHHHHHHhcCeEEEEeehhheeccccccCC-------CCCcCcCHHHHHHHHHhhcC
Confidence 223334445668999999999887654433222 11234566777777666665
|
|
| >KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.18 E-value=8.9e-10 Score=95.87 Aligned_cols=192 Identities=13% Similarity=0.157 Sum_probs=127.3
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCC--eEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCc--cEEEEc---C
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKRT--RIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGV--RSIICP---S 171 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g~--~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~--d~vi~~---~ 171 (306)
+++|+|||++|-+|++|.+-+...|. +-.++.-+ -.+|+++.++.+.+|+.. .+|||. .
T Consensus 1 s~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~s--------------kd~DLt~~a~t~~lF~~ekPthVIhlAAmV 66 (315)
T KOG1431|consen 1 SKKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIGS--------------KDADLTNLADTRALFESEKPTHVIHLAAMV 66 (315)
T ss_pred CceEEEecCCchHHHHHHHHHHhcCCCCcceEEecc--------------ccccccchHHHHHHHhccCCceeeehHhhh
Confidence 47999999999999999999998876 21111111 136899999999999764 778876 2
Q ss_pred Cch--------------------hhhcccccCCCEEEEecCcccccCCC------------Cc--ccccchHHHHHHH-H
Q 021854 172 EGF--------------------ISNAGSLKGVQHVILLSQLSVYRGSG------------GI--QALMKGNARKLAE-Q 216 (306)
Q Consensus 172 ~g~--------------------~~~~a~~~gvkr~V~iSS~~~~~~~~------------~~--~~~~~~~a~~~~~-~ 216 (306)
+|. ++..|-+.|++++|+.-|.+.+.... ++ ..+.-+.++.... .
T Consensus 67 GGlf~N~~ynldF~r~Nl~indNVlhsa~e~gv~K~vsclStCIfPdkt~yPIdEtmvh~gpphpsN~gYsyAKr~idv~ 146 (315)
T KOG1431|consen 67 GGLFHNNTYNLDFIRKNLQINDNVLHSAHEHGVKKVVSCLSTCIFPDKTSYPIDETMVHNGPPHPSNFGYSYAKRMIDVQ 146 (315)
T ss_pred cchhhcCCCchHHHhhcceechhHHHHHHHhchhhhhhhcceeecCCCCCCCCCHHHhccCCCCCCchHHHHHHHHHHHH
Confidence 332 23346678999999998887765211 11 1111111222211 1
Q ss_pred HHHHHHhcCCCEEEEEcCcccC-CCC-----------------------CCcceeeecCCCCccccCHHHHHHHHHHHhh
Q 021854 217 DESMLMASGIPYTIIRTGVLQN-TPG-----------------------GKQGFQFEEGCAANGSLSKEDAAFICVEALE 272 (306)
Q Consensus 217 aE~~l~~sgi~~tiiRPg~l~~-~~~-----------------------~~~~~~~~~g~~~~~~Is~~DVA~~iv~aL~ 272 (306)
...|-++.|-.+|.+-|..+.. .+. ...-.+++.|...+.+|+.+|+|++++++|.
T Consensus 147 n~aY~~qhg~~~tsviPtNvfGphDNfnpe~sHVlPali~r~h~ak~~gtd~~~VwGsG~PlRqFiys~DLA~l~i~vlr 226 (315)
T KOG1431|consen 147 NQAYRQQHGRDYTSVIPTNVFGPHDNFNPENSHVLPALIHRFHEAKRNGTDELTVWGSGSPLRQFIYSDDLADLFIWVLR 226 (315)
T ss_pred HHHHHHHhCCceeeeccccccCCCCCCCcccccchHHHHHHHHHHHhcCCceEEEecCCChHHHHhhHhHHHHHHHHHHH
Confidence 2445667888898888887542 110 1122356788888999999999999999997
Q ss_pred CCCCCCcEEEEecCC---cCHHHHHHHHHHHhhhcC
Q 021854 273 SIPQTGLIFEVVNGE---EKVSDWKKCFSRLMEKTG 305 (306)
Q Consensus 273 ~~~~~g~~~~v~~g~---~s~~d~~~l~~~l~~~~~ 305 (306)
+-..- +-.++..++ .+++|.+++..++..=.|
T Consensus 227 ~Y~~v-Epiils~ge~~EVtI~e~aeaV~ea~~F~G 261 (315)
T KOG1431|consen 227 EYEGV-EPIILSVGESDEVTIREAAEAVVEAVDFTG 261 (315)
T ss_pred hhcCc-cceEeccCccceeEHHHHHHHHHHHhCCCc
Confidence 64432 345555544 489999999988876554
|
|
| >KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.17 E-value=1.2e-09 Score=99.52 Aligned_cols=176 Identities=16% Similarity=0.143 Sum_probs=122.5
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhc---C-----CCceeeeccCCCHHHHHHHhcCc------
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF---G-----TYVESMAGDASNKKFLKTALRGV------ 164 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~---~-----~~v~~v~~D~~d~~~l~~~~~~~------ 164 (306)
...|+|||++.++|..++..+..+|++|.++.|+.++..+.. . ..+.+..+|+.|++++...+++.
T Consensus 33 ~~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~~~ 112 (331)
T KOG1210|consen 33 RRHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLEGP 112 (331)
T ss_pred cceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhccCC
Confidence 489999999999999999999999999999999998844322 1 12558889999999988877643
Q ss_pred -cEEEEcCCch------------------------------hhhcccccC-CCEEEEecCcccccCCCCcccccchHH--
Q 021854 165 -RSIICPSEGF------------------------------ISNAGSLKG-VQHVILLSQLSVYRGSGGIQALMKGNA-- 210 (306)
Q Consensus 165 -d~vi~~~~g~------------------------------~~~~a~~~g-vkr~V~iSS~~~~~~~~~~~~~~~~~a-- 210 (306)
|.+|++++.. .+.++++.. ..+|+++||..+..+-.+..+|.++++
T Consensus 113 ~d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a~~~i~GysaYs~sK~al 192 (331)
T KOG1210|consen 113 IDNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLAMLGIYGYSAYSPSKFAL 192 (331)
T ss_pred cceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhhhcCcccccccccHHHHH
Confidence 8999885521 111122222 449999999998888888888877543
Q ss_pred HHHHHHHHHHHHhcCCCEEEEEcCcccCC-C---CCCcceeeecCCCCccccCHHHHHHHHHHHhhCC
Q 021854 211 RKLAEQDESMLMASGIPYTIIRTGVLQNT-P---GGKQGFQFEEGCAANGSLSKEDAAFICVEALESI 274 (306)
Q Consensus 211 ~~~~~~aE~~l~~sgi~~tiiRPg~l~~~-~---~~~~~~~~~~g~~~~~~Is~~DVA~~iv~aL~~~ 274 (306)
+.......+.+...++.++..-|+.+... . ...++.....-+...+.+..|++|++++.-+...
T Consensus 193 rgLa~~l~qE~i~~~v~Vt~~~P~~~~tpGfE~En~tkP~~t~ii~g~ss~~~~e~~a~~~~~~~~rg 260 (331)
T KOG1210|consen 193 RGLAEALRQELIKYGVHVTLYYPPDTLTPGFERENKTKPEETKIIEGGSSVIKCEEMAKAIVKGMKRG 260 (331)
T ss_pred HHHHHHHHHHHhhcceEEEEEcCCCCCCCccccccccCchheeeecCCCCCcCHHHHHHHHHhHHhhc
Confidence 22333334445567899999988875422 1 1122222222233356789999999999877643
|
|
| >KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.17 E-value=2.6e-09 Score=97.43 Aligned_cols=191 Identities=17% Similarity=0.138 Sum_probs=124.5
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhc---------CCCceeeeccCCCHHHHHHHh------
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF---------GTYVESMAGDASNKKFLKTAL------ 161 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~---------~~~v~~v~~D~~d~~~l~~~~------ 161 (306)
..+|.++|||++.+||++++++|++.|++|++..|+.++..+.. +.++..+.+|+++.+..++++
T Consensus 6 l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~~ 85 (270)
T KOG0725|consen 6 LAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVEK 85 (270)
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHHH
Confidence 45899999999999999999999999999999999998632211 235788999999876554433
Q ss_pred --cCccEEEEcCCch--------------------------------hhhcccccCCCEEEEecCcccccCCCCc-cccc
Q 021854 162 --RGVRSIICPSEGF--------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGI-QALM 206 (306)
Q Consensus 162 --~~~d~vi~~~~g~--------------------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~-~~~~ 206 (306)
...|++|++++.. .....++.+-..++++||.......... ..|.
T Consensus 86 ~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg~I~~~ss~~~~~~~~~~~~~Y~ 165 (270)
T KOG0725|consen 86 FFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKGGSIVNISSVAGVGPGPGSGVAYG 165 (270)
T ss_pred hCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCCceEEEEeccccccCCCCCcccch
Confidence 3579999873310 0011334566789999998877554333 4554
Q ss_pred chHH--HHHHHHHHHHHHhcCCCEEEEEcCcccCCCCC-Ccc----eee-----ecCC-CCccccCHHHHHHHHHHHhhC
Q 021854 207 KGNA--RKLAEQDESMLMASGIPYTIIRTGVLQNTPGG-KQG----FQF-----EEGC-AANGSLSKEDAAFICVEALES 273 (306)
Q Consensus 207 ~~~a--~~~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~-~~~----~~~-----~~g~-~~~~~Is~~DVA~~iv~aL~~ 273 (306)
.+++ .++.+.....+...|+++..|-||.+...... ... ..+ .... .......++|||..++.++.+
T Consensus 166 ~sK~al~~ltr~lA~El~~~gIRvN~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~p~gr~g~~~eva~~~~fla~~ 245 (270)
T KOG0725|consen 166 VSKAALLQLTRSLAKELAKHGIRVNSVSPGLVKTSLRAAGLDDGEMEEFKEATDSKGAVPLGRVGTPEEVAEAAAFLASD 245 (270)
T ss_pred hHHHHHHHHHHHHHHHHhhcCcEEEEeecCcEeCCccccccccchhhHHhhhhccccccccCCccCHHHHHHhHHhhcCc
Confidence 4332 22333333446678999999999975533210 000 000 0111 123345779999999998876
Q ss_pred CC--CCCcEEEEecCC
Q 021854 274 IP--QTGLIFEVVNGE 287 (306)
Q Consensus 274 ~~--~~g~~~~v~~g~ 287 (306)
.. -.|+++.+.+|-
T Consensus 246 ~asyitG~~i~vdgG~ 261 (270)
T KOG0725|consen 246 DASYITGQTIIVDGGF 261 (270)
T ss_pred ccccccCCEEEEeCCE
Confidence 42 357777777654
|
|
| >PLN02730 enoyl-[acyl-carrier-protein] reductase | Back alignment and domain information |
|---|
Probab=99.15 E-value=1.2e-09 Score=101.27 Aligned_cols=188 Identities=13% Similarity=0.029 Sum_probs=111.8
Q ss_pred cCCCeEEEEcC--CChHHHHHHHHHHHCCCeEEEEecCcchhhhh--------------cC-----CCceeeeccC--CC
Q 021854 97 EARDAVLVTDG--DSDIGQMVILSLIVKRTRIKALVKDKRNAMES--------------FG-----TYVESMAGDA--SN 153 (306)
Q Consensus 97 ~~~~~ilVtGa--tG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~--------------~~-----~~v~~v~~D~--~d 153 (306)
..+|+++|||| +.+||.++++.|+++|++|++ .|..++++.. .. .....+.+|+ ++
T Consensus 7 l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~ 85 (303)
T PLN02730 7 LRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAVFDT 85 (303)
T ss_pred CCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecceecCc
Confidence 46899999999 799999999999999999988 6654332110 01 1145677888 32
Q ss_pred ------------------HHHHHHHh-------cCccEEEEcCC--c----h--------------------------hh
Q 021854 154 ------------------KKFLKTAL-------RGVRSIICPSE--G----F--------------------------IS 176 (306)
Q Consensus 154 ------------------~~~l~~~~-------~~~d~vi~~~~--g----~--------------------------~~ 176 (306)
++++++++ ..+|++||+++ . . +.
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~~~~~ 165 (303)
T PLN02730 86 PEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLLQHFG 165 (303)
T ss_pred cccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence 22444443 35799999842 1 0 01
Q ss_pred hcccccCCCEEEEecCcccccCCCCcc-cccchHHHH--HHHHHHHHHHh-cCCCEEEEEcCcccCCCCCCcce---e--
Q 021854 177 NAGSLKGVQHVILLSQLSVYRGSGGIQ-ALMKGNARK--LAEQDESMLMA-SGIPYTIIRTGVLQNTPGGKQGF---Q-- 247 (306)
Q Consensus 177 ~~a~~~gvkr~V~iSS~~~~~~~~~~~-~~~~~~a~~--~~~~aE~~l~~-sgi~~tiiRPg~l~~~~~~~~~~---~-- 247 (306)
..+.+ + .++|++||..+..+..... .|..+++.. +.+.....+.. .+|++..|.||++.......... .
T Consensus 166 p~m~~-~-G~II~isS~a~~~~~p~~~~~Y~asKaAl~~l~~~la~El~~~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~ 243 (303)
T PLN02730 166 PIMNP-G-GASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKYKIRVNTISAGPLGSRAAKAIGFIDDMIE 243 (303)
T ss_pred HHHhc-C-CEEEEEechhhcCCCCCCchhhHHHHHHHHHHHHHHHHHhCcCCCeEEEEEeeCCccCchhhcccccHHHHH
Confidence 11222 2 6899999987765443332 465443321 11222222333 58999999999875432211000 0
Q ss_pred -eecCCCCccccCHHHHHHHHHHHhhCCC--CCCcEEEEecCC
Q 021854 248 -FEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVNGE 287 (306)
Q Consensus 248 -~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~~~v~~g~ 287 (306)
.........+..++|+|.++++++.... ..|+.+.+.++-
T Consensus 244 ~~~~~~pl~r~~~peevA~~~~fLaS~~a~~itG~~l~vdGG~ 286 (303)
T PLN02730 244 YSYANAPLQKELTADEVGNAAAFLASPLASAITGATIYVDNGL 286 (303)
T ss_pred HHHhcCCCCCCcCHHHHHHHHHHHhCccccCccCCEEEECCCc
Confidence 0000111234678999999999997543 357788877653
|
|
| >PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases | Back alignment and domain information |
|---|
Probab=99.08 E-value=6.3e-10 Score=93.06 Aligned_cols=109 Identities=20% Similarity=0.270 Sum_probs=81.0
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCC-CeEEEEecC--cchhhhh------cCCCceeeeccCCCHHHHHHHhc-------C
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKD--KRNAMES------FGTYVESMAGDASNKKFLKTALR-------G 163 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~g-~~V~~l~R~--~~~~~~~------~~~~v~~v~~D~~d~~~l~~~~~-------~ 163 (306)
|+++||||+++||++++++|+++| ..|+++.|+ .+...+. .+.++.++.+|+++.++++++++ .
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP 80 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 589999999999999999999995 588888888 3332211 23578899999999988877664 5
Q ss_pred ccEEEEcCCch--------------------------hhhcccccCCCEEEEecCcccccCCCCcccccch
Q 021854 164 VRSIICPSEGF--------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKG 208 (306)
Q Consensus 164 ~d~vi~~~~g~--------------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~ 208 (306)
+|++|++++.. +..++...+-+++|++||..+..+......|..+
T Consensus 81 ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~as 151 (167)
T PF00106_consen 81 LDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLPQGGGKIVNISSIAGVRGSPGMSAYSAS 151 (167)
T ss_dssp ESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHTTEEEEEEEEGGGTSSSTTBHHHHHH
T ss_pred ccccccccccccccccccccchhhhhccccccceeeeeeehheeccccceEEecchhhccCCCCChhHHHH
Confidence 69999884421 1111222567899999999998887777777654
|
As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A .... |
| >PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=99.08 E-value=2.3e-09 Score=91.93 Aligned_cols=135 Identities=24% Similarity=0.241 Sum_probs=93.1
Q ss_pred eEEEEcCCChHHHHHHHHHHHCCC-eEEEEecCcc-h------hh--hhcCCCceeeeccCCCHHHHHHHhcC-------
Q 021854 101 AVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKR-N------AM--ESFGTYVESMAGDASNKKFLKTALRG------- 163 (306)
Q Consensus 101 ~ilVtGatG~iG~~l~~~L~~~g~-~V~~l~R~~~-~------~~--~~~~~~v~~v~~D~~d~~~l~~~~~~------- 163 (306)
+++|||++|+||..+++.|+.++. +|+++.|+.. . .. +..+..+.++.+|++|++.+.++++.
T Consensus 2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~~~ 81 (181)
T PF08659_consen 2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESAGARVEYVQCDVTDPEAVAAALAQLRQRFGP 81 (181)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTSHTTSS-
T ss_pred EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhCCCceeeeccCccCHHHHHHHHHHHHhccCC
Confidence 689999999999999999999984 8999999932 1 11 12346789999999999999998864
Q ss_pred ccEEEEcCCc----h----------------------hhhcccccCCCEEEEecCcccccCCCCcccccchHHHHHHHHH
Q 021854 164 VRSIICPSEG----F----------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQD 217 (306)
Q Consensus 164 ~d~vi~~~~g----~----------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~~~~~a 217 (306)
++.|||+++- . +.++.....++.||+.||..+..+..+...|...++.... .
T Consensus 82 i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~~~l~~~i~~SSis~~~G~~gq~~YaaAN~~lda--~ 159 (181)
T PF08659_consen 82 IDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALENRPLDFFILFSSISSLLGGPGQSAYAAANAFLDA--L 159 (181)
T ss_dssp EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTTTTTSEEEEEEEHHHHTT-TTBHHHHHHHHHHHH--H
T ss_pred cceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhcCCCCeEEEECChhHhccCcchHhHHHHHHHHHH--H
Confidence 3789998431 0 2234455789999999999988777777777554333222 2
Q ss_pred HHHHHhcCCCEEEEEcCccc
Q 021854 218 ESMLMASGIPYTIIRTGVLQ 237 (306)
Q Consensus 218 E~~l~~sgi~~tiiRPg~l~ 237 (306)
-...+..+.+++.|+.+.+.
T Consensus 160 a~~~~~~g~~~~sI~wg~W~ 179 (181)
T PF08659_consen 160 ARQRRSRGLPAVSINWGAWD 179 (181)
T ss_dssp HHHHHHTTSEEEEEEE-EBS
T ss_pred HHHHHhCCCCEEEEEccccC
Confidence 23455679999999987654
|
It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B .... |
| >KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only] | Back alignment and domain information |
|---|
Probab=99.05 E-value=1.3e-09 Score=94.95 Aligned_cols=188 Identities=17% Similarity=0.146 Sum_probs=129.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchh------hhhcC-CCceeeeccCCCHHHHHHHhcC-------
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA------MESFG-TYVESMAGDASNKKFLKTALRG------- 163 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~------~~~~~-~~v~~v~~D~~d~~~l~~~~~~------- 163 (306)
.+|.+++||+.|+||.++.++|+.+|..+.++..+.+.. .+..| ..+-++++|+++..+++++|+.
T Consensus 4 tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~fg~ 83 (261)
T KOG4169|consen 4 TGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENPEAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILATFGT 83 (261)
T ss_pred cCceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCHHHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHHHhCc
Confidence 489999999999999999999999999888887777652 22233 4788999999999888887764
Q ss_pred ccEEEEcCCch----------------------hhhcccc-c--CCCEEEEecCcccccCCCCcccccchHHHH--H--H
Q 021854 164 VRSIICPSEGF----------------------ISNAGSL-K--GVQHVILLSQLSVYRGSGGIQALMKGNARK--L--A 214 (306)
Q Consensus 164 ~d~vi~~~~g~----------------------~~~~a~~-~--gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~--~--~ 214 (306)
+|++|+.++=. ..+.+.+ . .-.-+|.+||..+..|.+....|..+++.- + .
T Consensus 84 iDIlINgAGi~~dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL~P~p~~pVY~AsKaGVvgFTRS 163 (261)
T KOG4169|consen 84 IDILINGAGILDDKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGLDPMPVFPVYAASKAGVVGFTRS 163 (261)
T ss_pred eEEEEcccccccchhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccccccCccccchhhhhcccceeeeehh
Confidence 48888764300 1122222 2 234688999999988877777776543311 1 1
Q ss_pred HHHHHHHHhcCCCEEEEEcCccc----CCCCCCcceeeecCC------CCccccCHHHHHHHHHHHhhCCCCCCcEEEEe
Q 021854 215 EQDESMLMASGIPYTIIRTGVLQ----NTPGGKQGFQFEEGC------AANGSLSKEDAAFICVEALESIPQTGLIFEVV 284 (306)
Q Consensus 215 ~~aE~~l~~sgi~~tiiRPg~l~----~~~~~~~~~~~~~g~------~~~~~Is~~DVA~~iv~aL~~~~~~g~~~~v~ 284 (306)
.+.+.+.+.+|+....++||... ...... +..+...+ ...+.-+..++|..++.+++.+ ..|.+|.+.
T Consensus 164 la~~ayy~~sGV~~~avCPG~t~t~l~~~~~~~-~~~~e~~~~~~~~l~~~~~q~~~~~a~~~v~aiE~~-~NGaiw~v~ 241 (261)
T KOG4169|consen 164 LADLAYYQRSGVRFNAVCPGFTRTDLAENIDAS-GGYLEYSDSIKEALERAPKQSPACCAINIVNAIEYP-KNGAIWKVD 241 (261)
T ss_pred hhhhhhHhhcCEEEEEECCCcchHHHHHHHHhc-CCcccccHHHHHHHHHcccCCHHHHHHHHHHHHhhc-cCCcEEEEe
Confidence 23467788999999999999832 111110 11111111 1134567799999999999984 457788888
Q ss_pred cCC
Q 021854 285 NGE 287 (306)
Q Consensus 285 ~g~ 287 (306)
.+.
T Consensus 242 ~g~ 244 (261)
T KOG4169|consen 242 SGS 244 (261)
T ss_pred cCc
Confidence 765
|
|
| >PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B | Back alignment and domain information |
|---|
Probab=99.03 E-value=4.7e-10 Score=100.03 Aligned_cols=179 Identities=15% Similarity=0.137 Sum_probs=115.5
Q ss_pred cCC--ChHHHHHHHHHHHCCCeEEEEecCcchh----hhhcC-CCceeeeccCCCHHHHHHH-------h-cCccEEEEc
Q 021854 106 DGD--SDIGQMVILSLIVKRTRIKALVKDKRNA----MESFG-TYVESMAGDASNKKFLKTA-------L-RGVRSIICP 170 (306)
Q Consensus 106 Gat--G~iG~~l~~~L~~~g~~V~~l~R~~~~~----~~~~~-~~v~~v~~D~~d~~~l~~~-------~-~~~d~vi~~ 170 (306)
|++ ++||++++++|+++|++|++..|+.++. .+... ...+++.+|++|.++++.+ + ..+|++|++
T Consensus 1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~g~iD~lV~~ 80 (241)
T PF13561_consen 1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYGAEVIQCDLSDEESVEALFDEAVERFGGRIDILVNN 80 (241)
T ss_dssp STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTTSEEEESCTTSHHHHHHHHHHHHHHHCSSESEEEEE
T ss_pred CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcCCceEeecCcchHHHHHHHHHHHhhcCCCeEEEEec
Confidence 667 9999999999999999999999999873 21111 2355799999998887766 4 557999987
Q ss_pred C---Cc-----h----------------------h----hhcccccCCCEEEEecCcccccCCCCcccccchHHH--HHH
Q 021854 171 S---EG-----F----------------------I----SNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--KLA 214 (306)
Q Consensus 171 ~---~g-----~----------------------~----~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~--~~~ 214 (306)
+ .. . + ...+++. .++|++||..+..+......|...++. .+.
T Consensus 81 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--gsii~iss~~~~~~~~~~~~y~~sKaal~~l~ 158 (241)
T PF13561_consen 81 AGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKG--GSIINISSIAAQRPMPGYSAYSASKAALEGLT 158 (241)
T ss_dssp EESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHE--EEEEEEEEGGGTSBSTTTHHHHHHHHHHHHHH
T ss_pred ccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhC--CCcccccchhhcccCccchhhHHHHHHHHHHH
Confidence 2 11 0 0 0111122 689999998877665555556443322 122
Q ss_pred HHHHHHHHh-cCCCEEEEEcCcccCCCCC----Ccce--eeecCCCCccccCHHHHHHHHHHHhhCC--CCCCcEEEEec
Q 021854 215 EQDESMLMA-SGIPYTIIRTGVLQNTPGG----KQGF--QFEEGCAANGSLSKEDAAFICVEALESI--PQTGLIFEVVN 285 (306)
Q Consensus 215 ~~aE~~l~~-sgi~~tiiRPg~l~~~~~~----~~~~--~~~~g~~~~~~Is~~DVA~~iv~aL~~~--~~~g~~~~v~~ 285 (306)
+..-..+.. .||++..|.||++...... .... .+........+..++|||.+++.++.+. .-.|+++.|.+
T Consensus 159 r~lA~el~~~~gIrVN~V~pG~i~t~~~~~~~~~~~~~~~~~~~~pl~r~~~~~evA~~v~fL~s~~a~~itG~~i~vDG 238 (241)
T PF13561_consen 159 RSLAKELAPKKGIRVNAVSPGPIETPMTERIPGNEEFLEELKKRIPLGRLGTPEEVANAVLFLASDAASYITGQVIPVDG 238 (241)
T ss_dssp HHHHHHHGGHGTEEEEEEEESSBSSHHHHHHHTHHHHHHHHHHHSTTSSHBEHHHHHHHHHHHHSGGGTTGTSEEEEEST
T ss_pred HHHHHHhccccCeeeeeecccceeccchhccccccchhhhhhhhhccCCCcCHHHHHHHHHHHhCccccCccCCeEEECC
Confidence 222233445 7999999999997633210 0000 0001111123468899999999999765 34688888876
Q ss_pred C
Q 021854 286 G 286 (306)
Q Consensus 286 g 286 (306)
|
T Consensus 239 G 239 (241)
T PF13561_consen 239 G 239 (241)
T ss_dssp T
T ss_pred C
Confidence 6
|
... |
| >KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.02 E-value=4.6e-09 Score=97.66 Aligned_cols=181 Identities=14% Similarity=0.058 Sum_probs=110.2
Q ss_pred CccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh--------cCCCceeeeccCCCHHHHHHHhc----
Q 021854 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES--------FGTYVESMAGDASNKKFLKTALR---- 162 (306)
Q Consensus 95 ~~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~--------~~~~v~~v~~D~~d~~~l~~~~~---- 162 (306)
....+++++||||+++||.+++++|+.+|.+|++.+|+.++..+. ....+.++.+|+++.+++++..+
T Consensus 31 ~~~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~ 110 (314)
T KOG1208|consen 31 IDLSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKK 110 (314)
T ss_pred ccCCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHHh
Confidence 344579999999999999999999999999999999998653221 12467789999999988877553
Q ss_pred ---CccEEEEcCC-----------ch-----------------hhhcccccCCCEEEEecCccccc-----CCCCccc--
Q 021854 163 ---GVRSIICPSE-----------GF-----------------ISNAGSLKGVQHVILLSQLSVYR-----GSGGIQA-- 204 (306)
Q Consensus 163 ---~~d~vi~~~~-----------g~-----------------~~~~a~~~gvkr~V~iSS~~~~~-----~~~~~~~-- 204 (306)
..|++|++++ |+ +.+..+.....|+|++||..... ...+...
T Consensus 111 ~~~~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~~~~~~~~~~l~~~~~~~ 190 (314)
T KOG1208|consen 111 KEGPLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSILGGGKIDLKDLSGEKAKL 190 (314)
T ss_pred cCCCccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCccccCccchhhccchhccC
Confidence 4589998743 11 23344545448999999976411 1111111
Q ss_pred ccchHHHH-HHH----HHHHHHHh--cCCCEEEEEcCcccCC-CCCCcceeeecCCCC-ccc-cCHHHHHHHHHHHhhCC
Q 021854 205 LMKGNARK-LAE----QDESMLMA--SGIPYTIIRTGVLQNT-PGGKQGFQFEEGCAA-NGS-LSKEDAAFICVEALESI 274 (306)
Q Consensus 205 ~~~~~a~~-~~~----~aE~~l~~--sgi~~tiiRPg~l~~~-~~~~~~~~~~~g~~~-~~~-Is~~DVA~~iv~aL~~~ 274 (306)
|....++. .|. .+.++.+. .|+.+..+.||.+... ...........-... ..+ -+.+.-|+.++.+..+|
T Consensus 191 ~~~~~~Y~~SKla~~l~~~eL~k~l~~~V~~~~~hPG~v~t~~l~r~~~~~~~l~~~l~~~~~ks~~~ga~t~~~~a~~p 270 (314)
T KOG1208|consen 191 YSSDAAYALSKLANVLLANELAKRLKKGVTTYSVHPGVVKTTGLSRVNLLLRLLAKKLSWPLTKSPEQGAATTCYAALSP 270 (314)
T ss_pred ccchhHHHHhHHHHHHHHHHHHHHhhcCceEEEECCCcccccceecchHHHHHHHHHHHHHhccCHHHHhhheehhccCc
Confidence 22212111 111 11111111 2899999999987654 222111100000000 011 36788888888888887
Q ss_pred C
Q 021854 275 P 275 (306)
Q Consensus 275 ~ 275 (306)
+
T Consensus 271 ~ 271 (314)
T KOG1208|consen 271 E 271 (314)
T ss_pred c
Confidence 5
|
|
| >KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only] | Back alignment and domain information |
|---|
Probab=99.02 E-value=7.9e-09 Score=94.22 Aligned_cols=141 Identities=18% Similarity=0.176 Sum_probs=105.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh---c-CCCceeeeccCCCHHHHHHHhc---------Cc
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---F-GTYVESMAGDASNKKFLKTALR---------GV 164 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~---~-~~~v~~v~~D~~d~~~l~~~~~---------~~ 164 (306)
..|.|+|||+..+.|..++++|.++|+.|.+-+-+++.++.+ . .+....+..|++++++++++.+ +.
T Consensus 28 ~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~s~rl~t~~LDVT~~esi~~a~~~V~~~l~~~gL 107 (322)
T KOG1610|consen 28 SDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETKSPRLRTLQLDVTKPESVKEAAQWVKKHLGEDGL 107 (322)
T ss_pred CCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhcCCcceeEeeccCCHHHHHHHHHHHHHhcccccc
Confidence 478999999999999999999999999999999777664433 2 4678899999999999988764 34
Q ss_pred cEEEEcCC--ch-----------------------------hhhcccccCCCEEEEecCcccccCCCCcccccchHHHHH
Q 021854 165 RSIICPSE--GF-----------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKL 213 (306)
Q Consensus 165 d~vi~~~~--g~-----------------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~~ 213 (306)
-.+|++++ +. +..+.++ --.|+|++||..+..+.+..++|..+++.-.
T Consensus 108 wglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~-arGRvVnvsS~~GR~~~p~~g~Y~~SK~aVe 186 (322)
T KOG1610|consen 108 WGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRR-ARGRVVNVSSVLGRVALPALGPYCVSKFAVE 186 (322)
T ss_pred eeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHh-ccCeEEEecccccCccCcccccchhhHHHHH
Confidence 57777644 11 1112222 3369999999999877778888877665332
Q ss_pred --HHHHHHHHHhcCCCEEEEEcCcccCC
Q 021854 214 --AEQDESMLMASGIPYTIIRTGVLQNT 239 (306)
Q Consensus 214 --~~~aE~~l~~sgi~~tiiRPg~l~~~ 239 (306)
.......++..|+++.+|-||.+...
T Consensus 187 af~D~lR~EL~~fGV~VsiiePG~f~T~ 214 (322)
T KOG1610|consen 187 AFSDSLRRELRPFGVKVSIIEPGFFKTN 214 (322)
T ss_pred HHHHHHHHHHHhcCcEEEEeccCccccc
Confidence 23334456678999999999976543
|
|
| >KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.00 E-value=4.3e-09 Score=88.25 Aligned_cols=187 Identities=17% Similarity=0.140 Sum_probs=121.4
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhc---CCCceeeeccCCCHHHHHHHhcCc---cEEEEc
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF---GTYVESMAGDASNKKFLKTALRGV---RSIICP 170 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~---~~~v~~v~~D~~d~~~l~~~~~~~---d~vi~~ 170 (306)
..++.|+||||.-+||++++.+|++.|.+|+++.|+++.+..+. +..+..+++|+.+.+.+.+++..+ |.+++.
T Consensus 5 laG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e~p~~I~Pi~~Dls~wea~~~~l~~v~pidgLVNN 84 (245)
T KOG1207|consen 5 LAGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKETPSLIIPIVGDLSAWEALFKLLVPVFPIDGLVNN 84 (245)
T ss_pred ccceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhhCCcceeeeEecccHHHHHHHhhcccCchhhhhcc
Confidence 45899999999999999999999999999999999998765543 446889999999988888877654 766655
Q ss_pred CC-----ch---------------------hhh-----cccccCCCEEEEecCcccccCCCCcccccchHHHHHH--HHH
Q 021854 171 SE-----GF---------------------ISN-----AGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLA--EQD 217 (306)
Q Consensus 171 ~~-----g~---------------------~~~-----~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~~~--~~a 217 (306)
++ .+ +.. +..+.--..+|.+||.+..++......|..+++.-.. +-.
T Consensus 85 AgvA~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~~GaIVNvSSqas~R~~~nHtvYcatKaALDmlTk~l 164 (245)
T KOG1207|consen 85 AGVATNHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQIKGAIVNVSSQASIRPLDNHTVYCATKAALDMLTKCL 164 (245)
T ss_pred chhhhcchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccCCceEEEecchhcccccCCceEEeecHHHHHHHHHHH
Confidence 32 00 000 1111223459999999988887777788765443221 111
Q ss_pred HHHHHhcCCCEEEEEcCcccCCCCCCcceeeecCC---------CCccccCHHHHHHHHHHHhhCCC--CCCcEEEEecC
Q 021854 218 ESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGC---------AANGSLSKEDAAFICVEALESIP--QTGLIFEVVNG 286 (306)
Q Consensus 218 E~~l~~sgi~~tiiRPg~l~~~~~~~~~~~~~~g~---------~~~~~Is~~DVA~~iv~aL~~~~--~~g~~~~v~~g 286 (306)
...|-...|++..+.|.......+... +..++ ....+.-+++|..++..+|.+.. ..|.+..+-+|
T Consensus 165 AlELGp~kIRVNsVNPTVVmT~MG~dn---WSDP~K~k~mL~riPl~rFaEV~eVVnA~lfLLSd~ssmttGstlpveGG 241 (245)
T KOG1207|consen 165 ALELGPQKIRVNSVNPTVVMTDMGRDN---WSDPDKKKKMLDRIPLKRFAEVDEVVNAVLFLLSDNSSMTTGSTLPVEGG 241 (245)
T ss_pred HHhhCcceeEeeccCCeEEEecccccc---cCCchhccchhhhCchhhhhHHHHHHhhheeeeecCcCcccCceeeecCC
Confidence 111223568888888887432222111 11111 11223455899999999987654 34555555443
|
|
| >COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.92 E-value=4.8e-08 Score=87.90 Aligned_cols=199 Identities=13% Similarity=0.036 Sum_probs=129.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh---------c-CCCceeeeccCCCHHHHHHHhcCc--c
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---------F-GTYVESMAGDASNKKFLKTALRGV--R 165 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~---------~-~~~v~~v~~D~~d~~~l~~~~~~~--d 165 (306)
++|+.||||-||.-|+++++.|+..||.|..+.|..+..... . ..++..+.+|++|...+.++++.+ |
T Consensus 1 ~~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v~Pd 80 (345)
T COG1089 1 MGKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEVQPD 80 (345)
T ss_pred CCceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHhcCch
Confidence 468999999999999999999999999999999986542111 1 135788999999999999999865 8
Q ss_pred EEEEcC-Cch---------------------hhhcccccCC--CEEEEecCcccccC-----------CCCcccccchHH
Q 021854 166 SIICPS-EGF---------------------ISNAGSLKGV--QHVILLSQLSVYRG-----------SGGIQALMKGNA 210 (306)
Q Consensus 166 ~vi~~~-~g~---------------------~~~~a~~~gv--kr~V~iSS~~~~~~-----------~~~~~~~~~~~a 210 (306)
-|++.+ ..+ +.++++..+. -||...||.--+.. -.+..+|.-.+.
T Consensus 81 EIYNLaAQS~V~vSFe~P~~T~~~~~iGtlrlLEaiR~~~~~~~rfYQAStSE~fG~v~~~pq~E~TPFyPrSPYAvAKl 160 (345)
T COG1089 81 EIYNLAAQSHVGVSFEQPEYTADVDAIGTLRLLEAIRILGEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKL 160 (345)
T ss_pred hheeccccccccccccCcceeeeechhHHHHHHHHHHHhCCcccEEEecccHHhhcCcccCccccCCCCCCCCHHHHHHH
Confidence 888762 221 4455655543 47777787655441 112223322111
Q ss_pred HHHHHHHHHHHHhcCCCEEEEEcCcccCCCC----------------------CCcceeeecCCCCccccCHHHHHHHHH
Q 021854 211 RKLAEQDESMLMASGIPYTIIRTGVLQNTPG----------------------GKQGFQFEEGCAANGSLSKEDAAFICV 268 (306)
Q Consensus 211 ~~~~~~aE~~l~~sgi~~tiiRPg~l~~~~~----------------------~~~~~~~~~g~~~~~~Is~~DVA~~iv 268 (306)
+. .+..-.|-.+.|+-. +-|.+.|... ....+.++.-+....|=+..|-.+++-
T Consensus 161 Ya-~W~tvNYResYgl~A---cnGILFNHESP~Rge~FVTRKIt~ava~Ik~G~q~~l~lGNldAkRDWG~A~DYVe~mw 236 (345)
T COG1089 161 YA-YWITVNYRESYGLFA---CNGILFNHESPLRGETFVTRKITRAVARIKLGLQDKLYLGNLDAKRDWGHAKDYVEAMW 236 (345)
T ss_pred HH-HheeeehHhhcCcee---ecceeecCCCCCCccceehHHHHHHHHHHHccccceEEeccccccccccchHHHHHHHH
Confidence 11 011222223344422 2233332221 122334456666778888999999998
Q ss_pred HHhhCCCCCCcEEEEecCCc-CHHHHHHHHHHHhh
Q 021854 269 EALESIPQTGLIFEVVNGEE-KVSDWKKCFSRLME 302 (306)
Q Consensus 269 ~aL~~~~~~g~~~~v~~g~~-s~~d~~~l~~~l~~ 302 (306)
..|+++. ...|.++.|++ +++++.++..+..+
T Consensus 237 lmLQq~~--PddyViATg~t~sVrefv~~Af~~~g 269 (345)
T COG1089 237 LMLQQEE--PDDYVIATGETHSVREFVELAFEMVG 269 (345)
T ss_pred HHHccCC--CCceEEecCceeeHHHHHHHHHHHcC
Confidence 8887665 45799998886 89999988777665
|
|
| >COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only] | Back alignment and domain information |
|---|
Probab=98.92 E-value=2.8e-08 Score=88.67 Aligned_cols=137 Identities=15% Similarity=0.190 Sum_probs=92.9
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcch-----hhhhcC----CCceeeeccCCC-HHHHHHHhc----
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-----AMESFG----TYVESMAGDASN-KKFLKTALR---- 162 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~-----~~~~~~----~~v~~v~~D~~d-~~~l~~~~~---- 162 (306)
..++.|+||||+++||+++++.|+++|++|+++.|..+. ..+... ..+.....|+++ .++++.+++
T Consensus 3 ~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~~~~~ 82 (251)
T COG1028 3 LSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDDEESVEALVAAAEE 82 (251)
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHHHHHHHH
Confidence 357999999999999999999999999999988887653 222222 356777899998 777665543
Q ss_pred ---CccEEEEcCCc-----hh----------------------hh----cccccCCCEEEEecCcccccCCCCc-ccccc
Q 021854 163 ---GVRSIICPSEG-----FI----------------------SN----AGSLKGVQHVILLSQLSVYRGSGGI-QALMK 207 (306)
Q Consensus 163 ---~~d~vi~~~~g-----~~----------------------~~----~a~~~gvkr~V~iSS~~~~~~~~~~-~~~~~ 207 (306)
.+|++|++++. .+ .. ..+ .. ++|++||..+. ..... ..|..
T Consensus 83 ~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~-~~--~Iv~isS~~~~-~~~~~~~~Y~~ 158 (251)
T COG1028 83 EFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMK-KQ--RIVNISSVAGL-GGPPGQAAYAA 158 (251)
T ss_pred HcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhh-hC--eEEEECCchhc-CCCCCcchHHH
Confidence 47988877331 10 01 011 11 99999999887 55553 66765
Q ss_pred hHHHH--HHHHHHHHHHhcCCCEEEEEcCccc
Q 021854 208 GNARK--LAEQDESMLMASGIPYTIIRTGVLQ 237 (306)
Q Consensus 208 ~~a~~--~~~~aE~~l~~sgi~~tiiRPg~l~ 237 (306)
+++.- +.+.....+...|+.++.|.||++.
T Consensus 159 sK~al~~~~~~l~~e~~~~gi~v~~v~PG~~~ 190 (251)
T COG1028 159 SKAALIGLTKALALELAPRGIRVNAVAPGYID 190 (251)
T ss_pred HHHHHHHHHHHHHHHHhhhCcEEEEEEeccCC
Confidence 54322 2222223445678999999999644
|
|
| >PRK08309 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.92 E-value=2.2e-08 Score=85.77 Aligned_cols=146 Identities=13% Similarity=0.084 Sum_probs=100.6
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh---c--CCCceeeeccCCCHHHHHHHhcC-------ccEE
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---F--GTYVESMAGDASNKKFLKTALRG-------VRSI 167 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~---~--~~~v~~v~~D~~d~~~l~~~~~~-------~d~v 167 (306)
|+++||||||++|. +++.|+++|++|+++.|+.++.... . +.++.++.+|++|.+++.+++++ .|.+
T Consensus 1 m~vlVtGGtG~gg~-la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id~l 79 (177)
T PRK08309 1 MHALVIGGTGMLKR-VSLWLCEKGFHVSVIARREVKLENVKRESTTPESITPLPLDYHDDDALKLAIKSTIEKNGPFDLA 79 (177)
T ss_pred CEEEEECcCHHHHH-HHHHHHHCcCEEEEEECCHHHHHHHHHHhhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCeEE
Confidence 57999999976665 9999999999999999987664322 1 24678889999999988877753 4777
Q ss_pred EEc----CCchhhhcccccCCC----EEEEecCcccccCCCCcccccchHHHHHHHHHHHHHHhcCCCEEEEEcCcccCC
Q 021854 168 ICP----SEGFISNAGSLKGVQ----HVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMASGIPYTIIRTGVLQNT 239 (306)
Q Consensus 168 i~~----~~g~~~~~a~~~gvk----r~V~iSS~~~~~~~~~~~~~~~~~a~~~~~~aE~~l~~sgi~~tiiRPg~l~~~ 239 (306)
|.. .+..+..+|++.+++ +|+++=...+.++ .. .. ..+......|-=|..|+..++
T Consensus 80 v~~vh~~~~~~~~~~~~~~gv~~~~~~~~h~~gs~~~~~------~~---------~~-~~~~~~~~~~~~i~lgf~~~~ 143 (177)
T PRK08309 80 VAWIHSSAKDALSVVCRELDGSSETYRLFHVLGSAASDP------RI---------PS-EKIGPARCSYRRVILGFVLED 143 (177)
T ss_pred EEeccccchhhHHHHHHHHccCCCCceEEEEeCCcCCch------hh---------hh-hhhhhcCCceEEEEEeEEEeC
Confidence 754 445588889999999 9998732222111 10 01 112234556666666654432
Q ss_pred CCCCcceeeecCCCCccccCHHHHHHHHHHHhhCCC
Q 021854 240 PGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIP 275 (306)
Q Consensus 240 ~~~~~~~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~ 275 (306)
.. .-+++-+.+++.++.+++.+.
T Consensus 144 ~~-------------~rwlt~~ei~~gv~~~~~~~~ 166 (177)
T PRK08309 144 TY-------------SRWLTHEEISDGVIKAIESDA 166 (177)
T ss_pred Cc-------------cccCchHHHHHHHHHHHhcCC
Confidence 21 236788999999999997654
|
|
| >KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.91 E-value=3.6e-08 Score=85.99 Aligned_cols=176 Identities=18% Similarity=0.211 Sum_probs=108.5
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHC-CCe-EEEEecCcchhhhh------cCCCceeeeccCCCHHHHHHHhc--------
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVK-RTR-IKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------- 162 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~-g~~-V~~l~R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~~~-------- 162 (306)
++.|+||||+-+||..++++|++. |.+ +++..|+++++.+. ..+++++++.|+++.+++.++.+
T Consensus 3 pksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~V~~iVg~ 82 (249)
T KOG1611|consen 3 PKSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKAATELALKSKSDSRVHIIQLDVTCDESIDNFVQEVEKIVGS 82 (249)
T ss_pred CccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHhhHHHHHhhccCCceEEEEEecccHHHHHHHHHHHHhhccc
Confidence 567999999999999999999975 444 44567778773221 13589999999999888777654
Q ss_pred -CccEEEEcCCc---h----------------------------hhhcccccC-----------CCEEEEecCcccccCC
Q 021854 163 -GVRSIICPSEG---F----------------------------ISNAGSLKG-----------VQHVILLSQLSVYRGS 199 (306)
Q Consensus 163 -~~d~vi~~~~g---~----------------------------~~~~a~~~g-----------vkr~V~iSS~~~~~~~ 199 (306)
|++.++.+++- + +..+.+++. .-.+|++||..+..+.
T Consensus 83 ~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS~~~s~~~ 162 (249)
T KOG1611|consen 83 DGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISSSAGSIGG 162 (249)
T ss_pred CCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeeccccccCC
Confidence 45777765330 0 011112222 2268889887765322
Q ss_pred ---CCcccccchHHHH--HHHHHHHHHHhcCCCEEEEEcCcccCCCCCCcceeeecCCCCccccCHHHHHHHHHHHhhC-
Q 021854 200 ---GGIQALMKGNARK--LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALES- 273 (306)
Q Consensus 200 ---~~~~~~~~~~a~~--~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~~~~~~~~g~~~~~~Is~~DVA~~iv~aL~~- 273 (306)
.++.+|.-+++.- ..+..-.-|+..++-++.++|||...+.++ ....+++|+-+.-++..+.+
T Consensus 163 ~~~~~~~AYrmSKaAlN~f~ksls~dL~~~~ilv~sihPGwV~TDMgg-----------~~a~ltveeSts~l~~~i~kL 231 (249)
T KOG1611|consen 163 FRPGGLSAYRMSKAALNMFAKSLSVDLKDDHILVVSIHPGWVQTDMGG-----------KKAALTVEESTSKLLASINKL 231 (249)
T ss_pred CCCcchhhhHhhHHHHHHHHHHhhhhhcCCcEEEEEecCCeEEcCCCC-----------CCcccchhhhHHHHHHHHHhc
Confidence 2223332222111 111121223446677889999998766544 23467888888888887753
Q ss_pred -CCCCCcEEEEec
Q 021854 274 -IPQTGLIFEVVN 285 (306)
Q Consensus 274 -~~~~g~~~~v~~ 285 (306)
+++.|.-|+-..
T Consensus 232 ~~~hnG~ffn~dl 244 (249)
T KOG1611|consen 232 KNEHNGGFFNRDG 244 (249)
T ss_pred CcccCcceEccCC
Confidence 456666666543
|
|
| >PRK06300 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.88 E-value=7.8e-08 Score=89.09 Aligned_cols=189 Identities=12% Similarity=0.065 Sum_probs=103.9
Q ss_pred cCCCeEEEEcCC--ChHHHHHHHHHHHCCCeEEEEecCc---------chhh--h----hcCC---------------Cc
Q 021854 97 EARDAVLVTDGD--SDIGQMVILSLIVKRTRIKALVKDK---------RNAM--E----SFGT---------------YV 144 (306)
Q Consensus 97 ~~~~~ilVtGat--G~iG~~l~~~L~~~g~~V~~l~R~~---------~~~~--~----~~~~---------------~v 144 (306)
..+|+++||||+ .+||++++++|+++|++|++..|.+ +... . ..+. ..
T Consensus 6 ~~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~~~~ 85 (299)
T PRK06300 6 LTGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWVPIYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMDASFDTP 85 (299)
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEeccchhhhhhhhcccccccccccccccchhhhhhHHHhhhhcCCC
Confidence 357999999995 8999999999999999999976431 1000 0 0000 11
Q ss_pred eeeeccCCC--------HHHHHHH-------hcCccEEEEcCCc------h--------------------------hhh
Q 021854 145 ESMAGDASN--------KKFLKTA-------LRGVRSIICPSEG------F--------------------------ISN 177 (306)
Q Consensus 145 ~~v~~D~~d--------~~~l~~~-------~~~~d~vi~~~~g------~--------------------------~~~ 177 (306)
+-+..|+++ .++++++ +..+|++|++++. . ...
T Consensus 86 ~~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~~a~~p 165 (299)
T PRK06300 86 EDVPEEIRENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLLSHFGP 165 (299)
T ss_pred EEeecccCccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 222222222 1123332 3457999987421 0 001
Q ss_pred cccccCCCEEEEecCcccccCCCCcc-cccchHHHH--HHHHHHHHHHh-cCCCEEEEEcCcccCCCCCC----cce--e
Q 021854 178 AGSLKGVQHVILLSQLSVYRGSGGIQ-ALMKGNARK--LAEQDESMLMA-SGIPYTIIRTGVLQNTPGGK----QGF--Q 247 (306)
Q Consensus 178 ~a~~~gvkr~V~iSS~~~~~~~~~~~-~~~~~~a~~--~~~~aE~~l~~-sgi~~tiiRPg~l~~~~~~~----~~~--~ 247 (306)
.+++. .++|++||..+..+..... .|..+++.. +.+.....+.. .||+++.|.||.+....... ... .
T Consensus 166 ~m~~~--G~ii~iss~~~~~~~p~~~~~Y~asKaAl~~lt~~la~el~~~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~~ 243 (299)
T PRK06300 166 IMNPG--GSTISLTYLASMRAVPGYGGGMSSAKAALESDTKVLAWEAGRRWGIRVNTISAGPLASRAGKAIGFIERMVDY 243 (299)
T ss_pred HhhcC--CeEEEEeehhhcCcCCCccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEEeCCccChhhhcccccHHHHHH
Confidence 12222 5799998877655443332 454433321 11222222333 48999999999864322110 000 0
Q ss_pred eecCCCCccccCHHHHHHHHHHHhhCCC--CCCcEEEEecCC
Q 021854 248 FEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVNGE 287 (306)
Q Consensus 248 ~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~~~v~~g~ 287 (306)
............++|||.++++++.... ..|+++.+.+|-
T Consensus 244 ~~~~~p~~r~~~peevA~~v~~L~s~~~~~itG~~i~vdGG~ 285 (299)
T PRK06300 244 YQDWAPLPEPMEAEQVGAAAAFLVSPLASAITGETLYVDHGA 285 (299)
T ss_pred HHhcCCCCCCcCHHHHHHHHHHHhCccccCCCCCEEEECCCc
Confidence 0000111235678999999999887532 457788877653
|
|
| >COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.88 E-value=2.6e-08 Score=85.72 Aligned_cols=142 Identities=10% Similarity=0.086 Sum_probs=98.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhc--CCCceeeeccCCCHHHHHHHhc-------CccEEE
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF--GTYVESMAGDASNKKFLKTALR-------GVRSII 168 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~--~~~v~~v~~D~~d~~~l~~~~~-------~~d~vi 168 (306)
.+.+||||||+.+||.++++++.+.|-+|++..|+.+++.+.. -+.+..+++|+.|.++.++.++ ..+++|
T Consensus 4 tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P~lNvli 83 (245)
T COG3967 4 TGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAENPEIHTEVCDVADRDSRRELVEWLKKEYPNLNVLI 83 (245)
T ss_pred cCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcCcchheeeecccchhhHHHHHHHHHhhCCchheee
Confidence 4689999999999999999999999999999999998865432 2578889999999876655443 458999
Q ss_pred EcCCch--------------------------------hhhcccccCCCEEEEecCcccccCCCCcccccchHH--HHHH
Q 021854 169 CPSEGF--------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA--RKLA 214 (306)
Q Consensus 169 ~~~~g~--------------------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a--~~~~ 214 (306)
++++=. +.....+..-..+|.+||--+..+...-..|..+++ ..+.
T Consensus 84 NNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~a~IInVSSGLafvPm~~~PvYcaTKAaiHsyt 163 (245)
T COG3967 84 NNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPEATIINVSSGLAFVPMASTPVYCATKAAIHSYT 163 (245)
T ss_pred ecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCCCceEEEeccccccCcccccccchhhHHHHHHHH
Confidence 874410 000112233457999999877766555556655433 1222
Q ss_pred HHHHHHHHhcCCCEEEEEcCcccCC
Q 021854 215 EQDESMLMASGIPYTIIRTGVLQNT 239 (306)
Q Consensus 215 ~~aE~~l~~sgi~~tiiRPg~l~~~ 239 (306)
......++..+++++-+-|..+...
T Consensus 164 ~aLR~Qlk~t~veVIE~~PP~V~t~ 188 (245)
T COG3967 164 LALREQLKDTSVEVIELAPPLVDTT 188 (245)
T ss_pred HHHHHHhhhcceEEEEecCCceecC
Confidence 2334445566788888888876543
|
|
| >KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=98.86 E-value=1.1e-08 Score=88.56 Aligned_cols=140 Identities=12% Similarity=-0.026 Sum_probs=97.0
Q ss_pred CCCeEEEEcCC-ChHHHHHHHHHHHCCCeEEEEecCcchhhhhc-CCCceeeeccCCCHHHHHHHhcC--------ccEE
Q 021854 98 ARDAVLVTDGD-SDIGQMVILSLIVKRTRIKALVKDKRNAMESF-GTYVESMAGDASNKKFLKTALRG--------VRSI 167 (306)
Q Consensus 98 ~~~~ilVtGat-G~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~-~~~v~~v~~D~~d~~~l~~~~~~--------~d~v 167 (306)
..+.|||||++ |+||.++++.+.+.||.|++..|+.+.+.++. ..++.....|+++++++.+.... .|++
T Consensus 6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~~~~Gkld~L 85 (289)
T KOG1209|consen 6 QPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRANPDGKLDLL 85 (289)
T ss_pred CCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhhCCCCceEEE
Confidence 36899999875 78999999999999999999999999876654 34688999999999888765532 4788
Q ss_pred EEcCCch----h-------------------hhcccc------cCCCEEEEecCcccccCCCCcccccchHHH--HHHHH
Q 021854 168 ICPSEGF----I-------------------SNAGSL------KGVQHVILLSQLSVYRGSGGIQALMKGNAR--KLAEQ 216 (306)
Q Consensus 168 i~~~~g~----~-------------------~~~a~~------~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~--~~~~~ 216 (306)
++.++.. . ++.++. ..-..+|++.|..++-+-+....|..+++. ++.+.
T Consensus 86 ~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaKGtIVnvgSl~~~vpfpf~~iYsAsKAAihay~~t 165 (289)
T KOG1209|consen 86 YNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIVNVGSLAGVVPFPFGSIYSASKAAIHAYART 165 (289)
T ss_pred EcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHccceEEEecceeEEeccchhhhhhHHHHHHHHhhhh
Confidence 8764310 0 111111 223589999999888776666666554331 11121
Q ss_pred HHHHHHhcCCCEEEEEcCccc
Q 021854 217 DESMLMASGIPYTIIRTGVLQ 237 (306)
Q Consensus 217 aE~~l~~sgi~~tiiRPg~l~ 237 (306)
....|+..|++++.+-||.+.
T Consensus 166 LrlEl~PFgv~Vin~itGGv~ 186 (289)
T KOG1209|consen 166 LRLELKPFGVRVINAITGGVA 186 (289)
T ss_pred cEEeeeccccEEEEeccccee
Confidence 222234468899988888854
|
|
| >PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.81 E-value=7.1e-08 Score=86.12 Aligned_cols=167 Identities=10% Similarity=0.049 Sum_probs=101.0
Q ss_pred HHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhc----CccEEEEcCCch----------------
Q 021854 115 VILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR----GVRSIICPSEGF---------------- 174 (306)
Q Consensus 115 l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~----~~d~vi~~~~g~---------------- 174 (306)
++++|+++|++|++++|+.++.. ..+++.+|++|.++++++++ ++|++||+++..
T Consensus 1 ~a~~l~~~G~~Vv~~~r~~~~~~-----~~~~~~~Dl~~~~~v~~~~~~~~~~iD~li~nAG~~~~~~~~~~~~vN~~~~ 75 (241)
T PRK12428 1 TARLLRFLGARVIGVDRREPGMT-----LDGFIQADLGDPASIDAAVAALPGRIDALFNIAGVPGTAPVELVARVNFLGL 75 (241)
T ss_pred ChHHHHhCCCEEEEEeCCcchhh-----hhHhhcccCCCHHHHHHHHHHhcCCCeEEEECCCCCCCCCHHHhhhhchHHH
Confidence 47889999999999999886632 24578899999999888876 479999985411
Q ss_pred --hhhcccc--cCCCEEEEecCccccc---------------------------CCCCcccccchHHHH--HHHHHH-HH
Q 021854 175 --ISNAGSL--KGVQHVILLSQLSVYR---------------------------GSGGIQALMKGNARK--LAEQDE-SM 220 (306)
Q Consensus 175 --~~~~a~~--~gvkr~V~iSS~~~~~---------------------------~~~~~~~~~~~~a~~--~~~~aE-~~ 220 (306)
+.+++.. .+-++||++||..++. +..+...|..+++.. +.+... ..
T Consensus 76 ~~l~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~e 155 (241)
T PRK12428 76 RHLTEALLPRMAPGGAIVNVASLAGAEWPQRLELHKALAATASFDEGAAWLAAHPVALATGYQLSKEALILWTMRQAQPW 155 (241)
T ss_pred HHHHHHHHHhccCCcEEEEeCcHHhhccccchHHHHhhhccchHHHHHHhhhccCCCcccHHHHHHHHHHHHHHHHHHHh
Confidence 1111211 1236999999988763 112223443332211 111111 23
Q ss_pred HHhcCCCEEEEEcCcccCCCCCC-cc----eeee-cCCCCccccCHHHHHHHHHHHhhCCC--CCCcEEEEecC
Q 021854 221 LMASGIPYTIIRTGVLQNTPGGK-QG----FQFE-EGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVNG 286 (306)
Q Consensus 221 l~~sgi~~tiiRPg~l~~~~~~~-~~----~~~~-~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~~~v~~g 286 (306)
+...|++++.|+||++....... .. .... .......+.+++|+|+++++++..+. ..|+...+.+|
T Consensus 156 ~~~~girvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~va~~~~~l~s~~~~~~~G~~i~vdgg 229 (241)
T PRK12428 156 FGARGIRVNCVAPGPVFTPILGDFRSMLGQERVDSDAKRMGRPATADEQAAVLVFLCSDAARWINGVNLPVDGG 229 (241)
T ss_pred hhccCeEEEEeecCCccCcccccchhhhhhHhhhhcccccCCCCCHHHHHHHHHHHcChhhcCccCcEEEecCc
Confidence 44568999999999864332110 00 0000 00111235678999999999886432 34677777655
|
|
| >TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA | Back alignment and domain information |
|---|
Probab=98.69 E-value=2e-07 Score=106.15 Aligned_cols=140 Identities=14% Similarity=0.152 Sum_probs=96.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHC-CCeEEEEecCcc------------------------------------------
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVK-RTRIKALVKDKR------------------------------------------ 134 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~-g~~V~~l~R~~~------------------------------------------ 134 (306)
.++++|||||+++||.++++.|+++ |++|+++.|+..
T Consensus 1996 ~g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~~ 2075 (2582)
T TIGR02813 1996 SDDVFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVRP 2075 (2582)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhcccc
Confidence 5789999999999999999999998 699999999820
Q ss_pred -----h----hh--hhcCCCceeeeccCCCHHHHHHHhc------CccEEEEcCCch-----------------------
Q 021854 135 -----N----AM--ESFGTYVESMAGDASNKKFLKTALR------GVRSIICPSEGF----------------------- 174 (306)
Q Consensus 135 -----~----~~--~~~~~~v~~v~~D~~d~~~l~~~~~------~~d~vi~~~~g~----------------------- 174 (306)
. +. ...+..+.++.+|++|.+.++++++ ++|.|||+++-.
T Consensus 2076 ~~~~~ei~~~la~l~~~G~~v~y~~~DVtD~~av~~av~~v~~~g~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~~nv~G 2155 (2582)
T TIGR02813 2076 VLSSLEIAQALAAFKAAGASAEYASADVTNSVSVAATVQPLNKTLQITGIIHGAGVLADKHIQDKTLEEFNAVYGTKVDG 2155 (2582)
T ss_pred cchhHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHHHH
Confidence 0 00 1123467889999999988877664 469999984410
Q ss_pred ---hhhcccccCCCEEEEecCcccccCCCCcccccchHHHHHHHHHHHHH-HhcCCCEEEEEcCcccC
Q 021854 175 ---ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESML-MASGIPYTIIRTGVLQN 238 (306)
Q Consensus 175 ---~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~~~~~aE~~l-~~sgi~~tiiRPg~l~~ 238 (306)
+..++.....++||++||..+..+..+...|...+..-.+ .+..+- +..+++++.|.||.+..
T Consensus 2156 ~~~Ll~al~~~~~~~IV~~SSvag~~G~~gqs~YaaAkaaL~~-la~~la~~~~~irV~sI~wG~wdt 2222 (2582)
T TIGR02813 2156 LLSLLAALNAENIKLLALFSSAAGFYGNTGQSDYAMSNDILNK-AALQLKALNPSAKVMSFNWGPWDG 2222 (2582)
T ss_pred HHHHHHHHHHhCCCeEEEEechhhcCCCCCcHHHHHHHHHHHH-HHHHHHHHcCCcEEEEEECCeecC
Confidence 2222333456789999999887776666677554332111 111111 12368899999998643
|
Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD. |
| >PRK06720 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.67 E-value=3.3e-07 Score=77.88 Aligned_cols=76 Identities=14% Similarity=0.158 Sum_probs=60.6
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhh------hcCCCceeeeccCCCHHHHHHHh-------cC
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTAL-------RG 163 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~------~~~~~v~~v~~D~~d~~~l~~~~-------~~ 163 (306)
..+++++||||+++||++++++|++.|++|+++.|+.+...+ ..+..+.++.+|++|.+++.+++ ..
T Consensus 14 l~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~G~ 93 (169)
T PRK06720 14 LAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAFSR 93 (169)
T ss_pred cCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 457899999999999999999999999999999988754321 12345678899999988877644 35
Q ss_pred ccEEEEcCC
Q 021854 164 VRSIICPSE 172 (306)
Q Consensus 164 ~d~vi~~~~ 172 (306)
+|++|++++
T Consensus 94 iDilVnnAG 102 (169)
T PRK06720 94 IDMLFQNAG 102 (169)
T ss_pred CCEEEECCC
Confidence 799999844
|
|
| >COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.58 E-value=2.3e-07 Score=88.16 Aligned_cols=91 Identities=21% Similarity=0.250 Sum_probs=76.0
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCC-CeEEEEecCcchhhhh---cCCCceeeeccCCCHHHHHHHhcCccEEEEcCCch
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALRGVRSIICPSEGF 174 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~l~R~~~~~~~~---~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~g~ 174 (306)
+++|+|.|| |+||+.++..|++.+ .+|++.+|+.++..+. ...++++.+.|+.|.+.+.+++++.|+||++.+.+
T Consensus 1 m~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d~~al~~li~~~d~VIn~~p~~ 79 (389)
T COG1748 1 MMKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAADVDALVALIKDFDLVINAAPPF 79 (389)
T ss_pred CCcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccChHHHHHHHhcCCEEEEeCCch
Confidence 478999999 999999999999999 8999999999875433 23479999999999999999999999999996654
Q ss_pred ----hhhcccccCCCEEEEec
Q 021854 175 ----ISNAGSLKGVQHVILLS 191 (306)
Q Consensus 175 ----~~~~a~~~gvkr~V~iS 191 (306)
+.++|.+.|+. +|=+|
T Consensus 80 ~~~~i~ka~i~~gv~-yvDts 99 (389)
T COG1748 80 VDLTILKACIKTGVD-YVDTS 99 (389)
T ss_pred hhHHHHHHHHHhCCC-EEEcc
Confidence 55677777774 44343
|
|
| >cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase | Back alignment and domain information |
|---|
Probab=98.41 E-value=1.1e-06 Score=76.07 Aligned_cols=74 Identities=16% Similarity=0.199 Sum_probs=61.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh---cC--CCceeeeccCCCHHHHHHHhcCccEEEEcC
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FG--TYVESMAGDASNKKFLKTALRGVRSIICPS 171 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~---~~--~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~ 171 (306)
.+++++|+||+|++|+.+++.|++.|++|+++.|+.+++... +. .+......|+.+.+++.++++++|+||+++
T Consensus 27 ~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~diVi~at 105 (194)
T cd01078 27 KGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGEGVGAVETSDDAARAAAIKGADVVFAAG 105 (194)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCCHHHHHHHHhcCCEEEECC
Confidence 468999999999999999999999999999999998764332 11 134566778889999999999999999883
|
Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo |
| >KOG2774 consensus NAD dependent epimerase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.30 E-value=3.1e-05 Score=68.25 Aligned_cols=205 Identities=13% Similarity=0.100 Sum_probs=126.5
Q ss_pred CccCCCeEEEEcCCChHHHHHHHHHHH-CCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhc--CccEEEEcC
Q 021854 95 PEEARDAVLVTDGDSDIGQMVILSLIV-KRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--GVRSIICPS 171 (306)
Q Consensus 95 ~~~~~~~ilVtGatG~iG~~l~~~L~~-~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~--~~d~vi~~~ 171 (306)
.+....+|||||+-|.+|..++..|.. .|-+-++++.-......-+ ..-.++-.|+-|...+++.+- ..|-+||-+
T Consensus 40 ~~~~~PrvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp~~V~-~~GPyIy~DILD~K~L~eIVVn~RIdWL~HfS 118 (366)
T KOG2774|consen 40 QTQKAPRVLITGSLGQLGRGLASLLRYMYGSECVILSDIVKPPANVT-DVGPYIYLDILDQKSLEEIVVNKRIDWLVHFS 118 (366)
T ss_pred ccCCCCeEEEecchHHHhHHHHHHHHHHhCCccEehhhccCCchhhc-ccCCchhhhhhccccHHHhhcccccceeeeHH
Confidence 345568999999999999999988865 4654444443221111111 123466788888888887763 457777751
Q ss_pred C-----c----------------hhhhcccccCCCEEEEecCcccccCCCCcccccc----------hHHHHHHH-HHHH
Q 021854 172 E-----G----------------FISNAGSLKGVQHVILLSQLSVYRGSGGIQALMK----------GNARKLAE-QDES 219 (306)
Q Consensus 172 ~-----g----------------~~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~----------~~a~~~~~-~aE~ 219 (306)
+ | .+++.+.+++.+-|| -|+.+++.+..+.++... +-.+.-++ ..|.
T Consensus 119 ALLSAvGE~NVpLA~~VNI~GvHNil~vAa~~kL~iFV-PSTIGAFGPtSPRNPTPdltIQRPRTIYGVSKVHAEL~GEy 197 (366)
T KOG2774|consen 119 ALLSAVGETNVPLALQVNIRGVHNILQVAAKHKLKVFV-PSTIGAFGPTSPRNPTPDLTIQRPRTIYGVSKVHAELLGEY 197 (366)
T ss_pred HHHHHhcccCCceeeeecchhhhHHHHHHHHcCeeEee-cccccccCCCCCCCCCCCeeeecCceeechhHHHHHHHHHH
Confidence 1 1 145667777775443 588888775443322111 11111122 2344
Q ss_pred HHHhcCCCEEEEE-cCcccCCCCCCcce-----------------eeecCCCCccccCHHHHHHHHHHHhhCCC--CCCc
Q 021854 220 MLMASGIPYTIIR-TGVLQNTPGGKQGF-----------------QFEEGCAANGSLSKEDAAFICVEALESIP--QTGL 279 (306)
Q Consensus 220 ~l~~sgi~~tiiR-Pg~l~~~~~~~~~~-----------------~~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~ 279 (306)
+-...++++-.+| ||.+.+.+.++... -+-.++....++..+|+-+.+++.+..+. ...+
T Consensus 198 ~~hrFg~dfr~~rfPg~is~~~pgggttdya~A~f~~Al~~gk~tCylrpdtrlpmmy~~dc~~~~~~~~~a~~~~lkrr 277 (366)
T KOG2774|consen 198 FNHRFGVDFRSMRFPGIISATKPGGGTTDYAIAIFYDALQKGKHTCYLRPDTRLPMMYDTDCMASVIQLLAADSQSLKRR 277 (366)
T ss_pred HHhhcCccceecccCcccccCCCCCCcchhHHHHHHHHHHcCCcccccCCCccCceeehHHHHHHHHHHHhCCHHHhhhh
Confidence 4445788888888 55565543321111 01145566778888999999999887664 4578
Q ss_pred EEEEecCCcCHHHHHHHHHHHh
Q 021854 280 IFEVVNGEEKVSDWKKCFSRLM 301 (306)
Q Consensus 280 ~~~v~~g~~s~~d~~~l~~~l~ 301 (306)
+|||++-.-+-+|+.+.+.+++
T Consensus 278 ~ynvt~~sftpee~~~~~~~~~ 299 (366)
T KOG2774|consen 278 TYNVTGFSFTPEEIADAIRRVM 299 (366)
T ss_pred eeeeceeccCHHHHHHHHHhhC
Confidence 9999987777788888777665
|
|
| >PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase | Back alignment and domain information |
|---|
Probab=98.30 E-value=2.4e-06 Score=81.82 Aligned_cols=88 Identities=23% Similarity=0.302 Sum_probs=68.3
Q ss_pred EEEEcCCChHHHHHHHHHHHCC-C-eEEEEecCcchhhhh----cCCCceeeeccCCCHHHHHHHhcCccEEEEcCCch-
Q 021854 102 VLVTDGDSDIGQMVILSLIVKR-T-RIKALVKDKRNAMES----FGTYVESMAGDASNKKFLKTALRGVRSIICPSEGF- 174 (306)
Q Consensus 102 ilVtGatG~iG~~l~~~L~~~g-~-~V~~l~R~~~~~~~~----~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~g~- 174 (306)
|+|.|| |.+|+.+++.|++.+ + +|++..|+.+++... ...+++++..|+.|.+++.++++++|+||++++.+
T Consensus 1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~dvVin~~gp~~ 79 (386)
T PF03435_consen 1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVNDPESLAELLRGCDVVINCAGPFF 79 (386)
T ss_dssp EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTTHHHHHHHHTTSSEEEE-SSGGG
T ss_pred CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCCHHHHHHHHhcCCEEEECCccch
Confidence 799999 999999999999887 4 899999999986554 34689999999999999999999999999986654
Q ss_pred ---hhhcccccCCCEEEEec
Q 021854 175 ---ISNAGSLKGVQHVILLS 191 (306)
Q Consensus 175 ---~~~~a~~~gvkr~V~iS 191 (306)
+.++|.+.|+ ++|-+|
T Consensus 80 ~~~v~~~~i~~g~-~yvD~~ 98 (386)
T PF03435_consen 80 GEPVARACIEAGV-HYVDTS 98 (386)
T ss_dssp HHHHHHHHHHHT--EEEESS
T ss_pred hHHHHHHHHHhCC-Ceeccc
Confidence 5667777776 566543
|
Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A. |
| >KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.21 E-value=7.1e-06 Score=72.95 Aligned_cols=75 Identities=17% Similarity=0.168 Sum_probs=59.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCC-----CeEEEEecCcchhhh-------hcC---CCceeeeccCCCHHHHHHH--
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKR-----TRIKALVKDKRNAME-------SFG---TYVESMAGDASNKKFLKTA-- 160 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g-----~~V~~l~R~~~~~~~-------~~~---~~v~~v~~D~~d~~~l~~~-- 160 (306)
++|.++|||+++++|..|+.+|++.. .++.+.+|+.+++++ .++ ..++++..|++|..++.++
T Consensus 2 ~RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~ 81 (341)
T KOG1478|consen 2 MRKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASK 81 (341)
T ss_pred CceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHH
Confidence 67899999999999999999999865 357778999988543 334 2688999999997766655
Q ss_pred -----hcCccEEEEcCC
Q 021854 161 -----LRGVRSIICPSE 172 (306)
Q Consensus 161 -----~~~~d~vi~~~~ 172 (306)
++..|.++..++
T Consensus 82 di~~rf~~ld~iylNAg 98 (341)
T KOG1478|consen 82 DIKQRFQRLDYIYLNAG 98 (341)
T ss_pred HHHHHhhhccEEEEccc
Confidence 455699997743
|
|
| >PLN00106 malate dehydrogenase | Back alignment and domain information |
|---|
Probab=98.19 E-value=6.2e-06 Score=77.11 Aligned_cols=98 Identities=16% Similarity=0.137 Sum_probs=67.6
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCC--eEEEEecCcch--hhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcCC--
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKRT--RIKALVKDKRN--AMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE-- 172 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g~--~V~~l~R~~~~--~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~-- 172 (306)
..+|+|+||+|.||..++..|+..+. +++++.++... +.+...........++.+.+++.++++++|+||++++
T Consensus 18 ~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~~~g~a~Dl~~~~~~~~i~~~~~~~d~~~~l~~aDiVVitAG~~ 97 (323)
T PLN00106 18 GFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIANTPGVAADVSHINTPAQVRGFLGDDQLGDALKGADLVIIPAGVP 97 (323)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCCCCeeEchhhhCCcCceEEEEeCCCCHHHHcCCCCEEEEeCCCC
Confidence 57999999999999999999987764 78888876622 1111111112234454445567889999999999833
Q ss_pred ---ch---------------hhhcccccCCCEEEEecCcccc
Q 021854 173 ---GF---------------ISNAGSLKGVQHVILLSQLSVY 196 (306)
Q Consensus 173 ---g~---------------~~~~a~~~gvkr~V~iSS~~~~ 196 (306)
+. +.+.+.+++.+.+|+++|.-+.
T Consensus 98 ~~~g~~R~dll~~N~~i~~~i~~~i~~~~p~aivivvSNPvD 139 (323)
T PLN00106 98 RKPGMTRDDLFNINAGIVKTLCEAVAKHCPNALVNIISNPVN 139 (323)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCCcc
Confidence 11 2344567889999999886654
|
|
| >COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.16 E-value=9.6e-06 Score=72.11 Aligned_cols=90 Identities=16% Similarity=0.238 Sum_probs=74.2
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcC--CCceeeeccCCCHHHHHHH-hcCccEEEEcCCch--
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG--TYVESMAGDASNKKFLKTA-LRGVRSIICPSEGF-- 174 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~--~~v~~v~~D~~d~~~l~~~-~~~~d~vi~~~~g~-- 174 (306)
|+++|.|+ |.+|..+++.|.+.|++|+++.+++++..+... ..+..+.+|-+|++.++++ +..+|+++.+++.-
T Consensus 1 m~iiIiG~-G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~~~~~~~v~gd~t~~~~L~~agi~~aD~vva~t~~d~~ 79 (225)
T COG0569 1 MKIIIIGA-GRVGRSVARELSEEGHNVVLIDRDEERVEEFLADELDTHVVIGDATDEDVLEEAGIDDADAVVAATGNDEV 79 (225)
T ss_pred CEEEEECC-cHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhhhcceEEEEecCCCHHHHHhcCCCcCCEEEEeeCCCHH
Confidence 68999999 999999999999999999999999998766444 4688999999999999998 88999999885542
Q ss_pred ---hhhccc-ccCCCEEEEe
Q 021854 175 ---ISNAGS-LKGVQHVILL 190 (306)
Q Consensus 175 ---~~~~a~-~~gvkr~V~i 190 (306)
+..++. ..|++++|--
T Consensus 80 N~i~~~la~~~~gv~~viar 99 (225)
T COG0569 80 NSVLALLALKEFGVPRVIAR 99 (225)
T ss_pred HHHHHHHHHHhcCCCcEEEE
Confidence 333443 3688888744
|
|
| >TIGR00715 precor6x_red precorrin-6x reductase | Back alignment and domain information |
|---|
Probab=98.13 E-value=1.2e-05 Score=72.86 Aligned_cols=90 Identities=16% Similarity=0.135 Sum_probs=68.1
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcC--ccEEEEcCCch---
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRG--VRSIICPSEGF--- 174 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~--~d~vi~~~~g~--- 174 (306)
|+|+|+||||. |+.++++|.++|++|++.+|+..........+...+..+..|.+.+.+.++. +|+||.++..+
T Consensus 1 m~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~~~~g~~~v~~g~l~~~~l~~~l~~~~i~~VIDAtHPfA~~ 79 (256)
T TIGR00715 1 MTVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLYPIHQALTVHTGALDPQELREFLKRHSIDILVDATHPFAAQ 79 (256)
T ss_pred CeEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCccccccccCCceEEECCCCHHHHHHHHHhcCCCEEEEcCCHHHHH
Confidence 58999999999 9999999999999999999999764333333334555666788889888864 79999986544
Q ss_pred ----hhhcccccCCCEEEEe
Q 021854 175 ----ISNAGSLKGVQHVILL 190 (306)
Q Consensus 175 ----~~~~a~~~gvkr~V~i 190 (306)
..++|++.|++.+=|.
T Consensus 80 is~~a~~a~~~~~ipylR~e 99 (256)
T TIGR00715 80 ITTNATAVCKELGIPYVRFE 99 (256)
T ss_pred HHHHHHHHHHHhCCcEEEEE
Confidence 4566777777755553
|
This enzyme was found to be a monomer by gel filtration. |
| >PTZ00325 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.12 E-value=1.2e-05 Score=75.19 Aligned_cols=99 Identities=14% Similarity=0.089 Sum_probs=69.4
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCC--CeEEEEecCcchh--hhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcCC
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRNA--MESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE 172 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g--~~V~~l~R~~~~~--~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~ 172 (306)
.++++|+|+||+|.||+.++..|+..+ .+++++.++.... .+.......+...+.+|..++.++++++|+||++++
T Consensus 6 ~~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~~~~g~a~Dl~~~~~~~~v~~~td~~~~~~~l~gaDvVVitaG 85 (321)
T PTZ00325 6 LKMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVGAPGVAADLSHIDTPAKVTGYADGELWEKALRGADLVLICAG 85 (321)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecCCCcccccchhhcCcCceEEEecCCCchHHHhCCCCEEEECCC
Confidence 357799999999999999999998665 5888888843221 111111113345566666666788999999999833
Q ss_pred -----ch---------------hhhcccccCCCEEEEecCccc
Q 021854 173 -----GF---------------ISNAGSLKGVQHVILLSQLSV 195 (306)
Q Consensus 173 -----g~---------------~~~~a~~~gvkr~V~iSS~~~ 195 (306)
+. +.+.+.+++++++|+++|..+
T Consensus 86 ~~~~~~~tR~dll~~N~~i~~~i~~~i~~~~~~~iviv~SNPv 128 (321)
T PTZ00325 86 VPRKPGMTRDDLFNTNAPIVRDLVAAVASSAPKAIVGIVSNPV 128 (321)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcH
Confidence 10 334567789999999999755
|
|
| >KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=98.06 E-value=1.7e-05 Score=66.79 Aligned_cols=189 Identities=15% Similarity=0.165 Sum_probs=117.1
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcch---hhhhcCCCceeeeccCCCHHHHHHHhc-------CccE
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN---AMESFGTYVESMAGDASNKKFLKTALR-------GVRS 166 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~---~~~~~~~~v~~v~~D~~d~~~l~~~~~-------~~d~ 166 (306)
.++-..+|||+.+++|+..++.|+.+|..|.++.-..++ .....+.++.+...|++.++++..++. ..|+
T Consensus 7 ~kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vakelg~~~vf~padvtsekdv~aala~ak~kfgrld~ 86 (260)
T KOG1199|consen 7 TKGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKELGGKVVFTPADVTSEKDVRAALAKAKAKFGRLDA 86 (260)
T ss_pred hcCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHhCCceEEeccccCcHHHHHHHHHHHHhhccceee
Confidence 356788999999999999999999999999999877665 234467789999999999988887774 3599
Q ss_pred EEEcCC---ch-----------------------------hhhc----c-----cccC-CCEEEEecCcccccCCCCccc
Q 021854 167 IICPSE---GF-----------------------------ISNA----G-----SLKG-VQHVILLSQLSVYRGSGGIQA 204 (306)
Q Consensus 167 vi~~~~---g~-----------------------------~~~~----a-----~~~g-vkr~V~iSS~~~~~~~~~~~~ 204 (306)
.++|++ .+ ++.. + .+.| -.-+|...|.+++.+..+...
T Consensus 87 ~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgviintasvaafdgq~gqaa 166 (260)
T KOG1199|consen 87 LVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTASVAAFDGQTGQAA 166 (260)
T ss_pred eeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeeceeeeecCccchhh
Confidence 998743 00 0000 0 0111 123556667777776666666
Q ss_pred ccchHHHH--HHHHHHHHHHhcCCCEEEEEcCcccCCCC-----CCcceeeecCCCCccccCHHHHHHHHHHHhhCCCCC
Q 021854 205 LMKGNARK--LAEQDESMLMASGIPYTIIRTGVLQNTPG-----GKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQT 277 (306)
Q Consensus 205 ~~~~~a~~--~~~~aE~~l~~sgi~~tiiRPg~l~~~~~-----~~~~~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~~~ 277 (306)
|..++..- +..-..+-+...||++..|-||.|....- ....+.-..-....-.=++.+-|..+-.++++|-..
T Consensus 167 ysaskgaivgmtlpiardla~~gir~~tiapglf~tpllsslpekv~~fla~~ipfpsrlg~p~eyahlvqaiienp~ln 246 (260)
T KOG1199|consen 167 YSASKGAIVGMTLPIARDLAGDGIRFNTIAPGLFDTPLLSSLPEKVKSFLAQLIPFPSRLGHPHEYAHLVQAIIENPYLN 246 (260)
T ss_pred hhcccCceEeeechhhhhcccCceEEEeecccccCChhhhhhhHHHHHHHHHhCCCchhcCChHHHHHHHHHHHhCcccC
Confidence 65432110 00111122445689999999998653321 111110000000112235567788888888888888
Q ss_pred CcEEEEec
Q 021854 278 GLIFEVVN 285 (306)
Q Consensus 278 g~~~~v~~ 285 (306)
|++..+.+
T Consensus 247 gevir~dg 254 (260)
T KOG1199|consen 247 GEVIRFDG 254 (260)
T ss_pred CeEEEecc
Confidence 87777653
|
|
| >PRK09620 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.05 E-value=1.5e-05 Score=71.00 Aligned_cols=174 Identities=13% Similarity=0.157 Sum_probs=92.6
Q ss_pred CCCeEEEEcCC----------------ChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCC--CceeeeccCCCHHHHHH
Q 021854 98 ARDAVLVTDGD----------------SDIGQMVILSLIVKRTRIKALVKDKRNAMESFGT--YVESMAGDASNKKFLKT 159 (306)
Q Consensus 98 ~~~~ilVtGat----------------G~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~--~v~~v~~D~~d~~~l~~ 159 (306)
.+++||||+|. |++|++++++|+.+|++|+++.+.........+. .+..+..+....+.+.+
T Consensus 2 ~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~~~~~~~~~~~~V~s~~d~~~~l~~ 81 (229)
T PRK09620 2 KGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEKPNDINNQLELHPFEGIIDLQDKMKS 81 (229)
T ss_pred CCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCcCCCcccCCceeEEEEecHHHHHHHHHH
Confidence 47899999886 9999999999999999999987643321111111 23345553333467788
Q ss_pred Hhc--CccEEEEcCC--chhhhc-ccc--------cCCC-----EEEEec------CcccccCCCCcccccch-H--HHH
Q 021854 160 ALR--GVRSIICPSE--GFISNA-GSL--------KGVQ-----HVILLS------QLSVYRGSGGIQALMKG-N--ARK 212 (306)
Q Consensus 160 ~~~--~~d~vi~~~~--g~~~~~-a~~--------~gvk-----r~V~iS------S~~~~~~~~~~~~~~~~-~--a~~ 212 (306)
+++ ++|+|||+++ .+..+. +.. .+++ .+=+.- +.....+..-.-.|... . ...
T Consensus 82 ~~~~~~~D~VIH~AAvsD~~~~~~~~~~~~~~~~~~Ki~~~~~~~l~L~~~pdIl~~l~~~~~~~~~vGFkaEt~~~~~~ 161 (229)
T PRK09620 82 IITHEKVDAVIMAAAGSDWVVDKICDQEGNVLDMNGKISSDIAPIIHFQKAPKVLKQIKQWDPETVLVGFKLESDVNEEE 161 (229)
T ss_pred HhcccCCCEEEECccccceecccccccccccccccCCCcCCCCCeEEEEECcHHHHHHHhhCCCCEEEEEEeccCCCHHH
Confidence 884 6899999833 332211 110 0111 011111 11111111101111110 0 112
Q ss_pred HHHHHHHHHHhcCCCEEEEEcCcccCCCCC-CcceeeecCCCCccccCHHHHHHHHHHHhhC
Q 021854 213 LAEQDESMLMASGIPYTIIRTGVLQNTPGG-KQGFQFEEGCAANGSLSKEDAAFICVEALES 273 (306)
Q Consensus 213 ~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~-~~~~~~~~g~~~~~~Is~~DVA~~iv~aL~~ 273 (306)
....++..|...++++++.+.-. ...+. .....+..........+..++|+.++..+..
T Consensus 162 l~~~A~~kl~~k~~D~ivaN~~~--~~~g~~~~~~ii~~~~~~~~~~~K~~iA~~i~~~i~~ 221 (229)
T PRK09620 162 LFERAKNRMEEAKASVMIANSPH--SLYSRGAMHYVIGQDGKGQLCNGKDETAKEIVKRLEV 221 (229)
T ss_pred HHHHHHHHHHHcCCCEEEECCcc--cccCCCcEEEEEeCCCccccCCCHHHHHHHHHHHHHH
Confidence 23456666778899999887632 11111 1223332222223456889999999887754
|
|
| >PRK12548 shikimate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.96 E-value=3e-05 Score=71.48 Aligned_cols=74 Identities=8% Similarity=0.080 Sum_probs=58.5
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCe-EEEEecCc---chhhhh---cC---CCceeeeccCCCHHHHHHHhcCccE
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTR-IKALVKDK---RNAMES---FG---TYVESMAGDASNKKFLKTALRGVRS 166 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~-V~~l~R~~---~~~~~~---~~---~~v~~v~~D~~d~~~l~~~~~~~d~ 166 (306)
..+++++|+|| |++|++++..|+..|++ |.++.|+. +++++. +. ..+.+...|+.+.+.+...++.+|+
T Consensus 124 ~~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~Di 202 (289)
T PRK12548 124 VKGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEIASSDI 202 (289)
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhhccCCE
Confidence 34689999999 89999999999999986 99999986 443221 11 2345667889888888888889999
Q ss_pred EEEcC
Q 021854 167 IICPS 171 (306)
Q Consensus 167 vi~~~ 171 (306)
+|+++
T Consensus 203 lINaT 207 (289)
T PRK12548 203 LVNAT 207 (289)
T ss_pred EEEeC
Confidence 99983
|
|
| >PRK06732 phosphopantothenate--cysteine ligase; Validated | Back alignment and domain information |
|---|
Probab=97.95 E-value=3.2e-05 Score=68.90 Aligned_cols=71 Identities=4% Similarity=0.099 Sum_probs=49.4
Q ss_pred eEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCC--HHHHHHHhcCccEEEEcCC
Q 021854 101 AVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASN--KKFLKTALRGVRSIICPSE 172 (306)
Q Consensus 101 ~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d--~~~l~~~~~~~d~vi~~~~ 172 (306)
|++=-.+||++|++++++|+++|++|+++.|...... ....+++++..+..+ .+.+.+.++++|+|||+++
T Consensus 18 R~itN~SSG~iG~aLA~~L~~~G~~V~li~r~~~~~~-~~~~~v~~i~v~s~~~m~~~l~~~~~~~DivIh~AA 90 (229)
T PRK06732 18 RGITNHSTGQLGKIIAETFLAAGHEVTLVTTKTAVKP-EPHPNLSIIEIENVDDLLETLEPLVKDHDVLIHSMA 90 (229)
T ss_pred eeecCccchHHHHHHHHHHHhCCCEEEEEECcccccC-CCCCCeEEEEEecHHHHHHHHHHHhcCCCEEEeCCc
Confidence 3333467889999999999999999999988653211 112356666654332 3456677888999999843
|
|
| >KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=97.92 E-value=2.1e-05 Score=69.02 Aligned_cols=178 Identities=15% Similarity=0.081 Sum_probs=104.2
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhh-----hhcCCCceeeeccCCCHHHHHHHhc-------Cc
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM-----ESFGTYVESMAGDASNKKFLKTALR-------GV 164 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~-----~~~~~~v~~v~~D~~d~~~l~~~~~-------~~ 164 (306)
.+++.|||||++-+||..++..+.+.+-+.+...++...+. -..++......+|+.....+...++ .-
T Consensus 4 ~~r~villTGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~~~~L~v~~gd~~v~~~g~~~e~~~l~al~e~~r~k~gkr 83 (253)
T KOG1204|consen 4 NMRKVILLTGASRGIGTGSVATILAEDDEALRYGVARLLAELEGLKVAYGDDFVHVVGDITEEQLLGALREAPRKKGGKR 83 (253)
T ss_pred ccceEEEEecCCCCccHHHHHHHHhcchHHHHHhhhcccccccceEEEecCCcceechHHHHHHHHHHHHhhhhhcCCce
Confidence 46789999999999999999999888865544433332221 0111222333445554444444332 23
Q ss_pred cEEEEcCCc--h------------------------hh-------hcccccC-CCEEEEecCcccccCCCCcccccchHH
Q 021854 165 RSIICPSEG--F------------------------IS-------NAGSLKG-VQHVILLSQLSVYRGSGGIQALMKGNA 210 (306)
Q Consensus 165 d~vi~~~~g--~------------------------~~-------~~a~~~g-vkr~V~iSS~~~~~~~~~~~~~~~~~a 210 (306)
|.+||+++. . +. ..-++.. .+.+|++||.++..+-.....|..+++
T Consensus 84 ~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~~~vVnvSS~aav~p~~~wa~yc~~Ka 163 (253)
T KOG1204|consen 84 DIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVNGNVVNVSSLAAVRPFSSWAAYCSSKA 163 (253)
T ss_pred eEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCccCeEEEecchhhhccccHHHHhhhhHH
Confidence 888887441 1 00 0011121 478999999999999888888887655
Q ss_pred HHHHHHHHHHHHhc-CCCEEEEEcCcccCCCC----C---Ccc---eeeecCCCCccccCHHHHHHHHHHHhhCC
Q 021854 211 RKLAEQDESMLMAS-GIPYTIIRTGVLQNTPG----G---KQG---FQFEEGCAANGSLSKEDAAFICVEALESI 274 (306)
Q Consensus 211 ~~~~~~aE~~l~~s-gi~~tiiRPg~l~~~~~----~---~~~---~~~~~g~~~~~~Is~~DVA~~iv~aL~~~ 274 (306)
.......-...++. ++.+..++||.+..... . -.+ ..+..-......++..+-|+.+..+++..
T Consensus 164 Ar~m~f~~lA~EEp~~v~vl~~aPGvvDT~mq~~ir~~~~~~p~~l~~f~el~~~~~ll~~~~~a~~l~~L~e~~ 238 (253)
T KOG1204|consen 164 ARNMYFMVLASEEPFDVRVLNYAPGVVDTQMQVCIRETSRMTPADLKMFKELKESGQLLDPQVTAKVLAKLLEKG 238 (253)
T ss_pred HHHHHHHHHhhcCccceeEEEccCCcccchhHHHHhhccCCCHHHHHHHHHHHhcCCcCChhhHHHHHHHHHHhc
Confidence 43322222222343 88899999998643221 0 000 11112223345778888898888888765
|
|
| >PRK13656 trans-2-enoyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.90 E-value=5.1e-05 Score=72.15 Aligned_cols=71 Identities=18% Similarity=0.253 Sum_probs=54.5
Q ss_pred CCeEEEEcCCChHHHH--HHHHHHHCCCeEEEEecCcch---------------hh---hhcCCCceeeeccCCCHHHHH
Q 021854 99 RDAVLVTDGDSDIGQM--VILSLIVKRTRIKALVKDKRN---------------AM---ESFGTYVESMAGDASNKKFLK 158 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~--l~~~L~~~g~~V~~l~R~~~~---------------~~---~~~~~~v~~v~~D~~d~~~l~ 158 (306)
+|++||||+++++|.+ +++.| ..|++|+++.+..++ .. +..+..+..+.+|+++.+.++
T Consensus 41 gK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E~v~ 119 (398)
T PRK13656 41 PKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDEIKQ 119 (398)
T ss_pred CCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHH
Confidence 6999999999999999 89999 999999988853311 11 112334667899999987776
Q ss_pred HHh-------cCccEEEEc
Q 021854 159 TAL-------RGVRSIICP 170 (306)
Q Consensus 159 ~~~-------~~~d~vi~~ 170 (306)
+++ ..+|++||+
T Consensus 120 ~lie~I~e~~G~IDiLVnS 138 (398)
T PRK13656 120 KVIELIKQDLGQVDLVVYS 138 (398)
T ss_pred HHHHHHHHhcCCCCEEEEC
Confidence 655 357999998
|
|
| >KOG3019 consensus Predicted nucleoside-diphosphate sugar epimerase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.88 E-value=4e-05 Score=67.24 Aligned_cols=194 Identities=15% Similarity=0.089 Sum_probs=111.5
Q ss_pred CCCeEEEEcCCChHHHHHHH-----HHHHCC----CeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEE
Q 021854 98 ARDAVLVTDGDSDIGQMVIL-----SLIVKR----TRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSII 168 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~-----~L~~~g----~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi 168 (306)
+++..++-+.+|.|+..|.. ++-..+ |.|++++|.+.+..- .+-..|..-.- -.|++++
T Consensus 11 ~sr~a~~~~~~g~i~~nl~~~~~~~H~t~~~~a~~h~vtv~sR~pg~~ri------tw~el~~~Gip------~sc~a~v 78 (315)
T KOG3019|consen 11 KSRDAVSNWSNGIIRENLGSETSCCHDTNVHSADNHAVTVLSRSPGKARI------TWPELDFPGIP------ISCVAGV 78 (315)
T ss_pred ccccCCCCccccchhccccCcccccccCCCCcccccceEEEecCCCCccc------ccchhcCCCCc------eehHHHH
Confidence 45677788899999877765 333333 899999999976331 11111111100 0111111
Q ss_pred Ec------------CCc--------------hhhhccccc--CCCEEEEecCcccccCCCCcccccchH----HHHHHH-
Q 021854 169 CP------------SEG--------------FISNAGSLK--GVQHVILLSQLSVYRGSGGIQALMKGN----ARKLAE- 215 (306)
Q Consensus 169 ~~------------~~g--------------~~~~~a~~~--gvkr~V~iSS~~~~~~~~~~~~~~~~~----a~~~~~- 215 (306)
.+ +++ .++++...+ -.+-+|++|..+.|.++... .|.... .--+.+
T Consensus 79 na~g~n~l~P~rRWsp~fqkev~gSRi~~t~~la~aI~~aPq~~~~~Vlv~gva~y~pS~s~-eY~e~~~~qgfd~~srL 157 (315)
T KOG3019|consen 79 NAVGNNALLPIRRWSPEFQKEVKGSRIRVTSKLADAINNAPQEARPTVLVSGVAVYVPSESQ-EYSEKIVHQGFDILSRL 157 (315)
T ss_pred hhhhhhccCchhhcCHHHHHHhhcceeeHHHHHHHHHhcCCCCCCCeEEEEeeEEecccccc-ccccccccCChHHHHHH
Confidence 11 111 134444443 24578899888887653221 111100 000111
Q ss_pred --HHHHH--HHhcCCCEEEEEcCcccCCCCC-----------CcceeeecCCCCccccCHHHHHHHHHHHhhCCCCCCcE
Q 021854 216 --QDESM--LMASGIPYTIIRTGVLQNTPGG-----------KQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLI 280 (306)
Q Consensus 216 --~aE~~--l~~sgi~~tiiRPg~l~~~~~~-----------~~~~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~~~g~~ 280 (306)
+-|.. ......+.++||.|......+. +-+-.++.|.+-..+|+++|++..+.++|+++...|-+
T Consensus 158 ~l~WE~aA~~~~~~~r~~~iR~GvVlG~gGGa~~~M~lpF~~g~GGPlGsG~Q~fpWIHv~DL~~li~~ale~~~v~GVi 237 (315)
T KOG3019|consen 158 CLEWEGAALKANKDVRVALIRIGVVLGKGGGALAMMILPFQMGAGGPLGSGQQWFPWIHVDDLVNLIYEALENPSVKGVI 237 (315)
T ss_pred HHHHHHHhhccCcceeEEEEEEeEEEecCCcchhhhhhhhhhccCCcCCCCCeeeeeeehHHHHHHHHHHHhcCCCCcee
Confidence 11222 2234689999999985533221 11112345666688999999999999999999887755
Q ss_pred EEEecCCcCHHHHHHHHHHHhhhc
Q 021854 281 FEVVNGEEKVSDWKKCFSRLMEKT 304 (306)
Q Consensus 281 ~~v~~g~~s~~d~~~l~~~l~~~~ 304 (306)
.-++..+.+..|+.+.|..+..++
T Consensus 238 NgvAP~~~~n~Ef~q~lg~aL~Rp 261 (315)
T KOG3019|consen 238 NGVAPNPVRNGEFCQQLGSALSRP 261 (315)
T ss_pred cccCCCccchHHHHHHHHHHhCCC
Confidence 555545567889999998887765
|
|
| >PRK14982 acyl-ACP reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.85 E-value=4.5e-05 Score=71.67 Aligned_cols=70 Identities=20% Similarity=0.203 Sum_probs=52.4
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHC-C-CeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcC
Q 021854 96 EEARDAVLVTDGDSDIGQMVILSLIVK-R-TRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS 171 (306)
Q Consensus 96 ~~~~~~ilVtGatG~iG~~l~~~L~~~-g-~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~ 171 (306)
...+++|+||||+|+||+.++++|+.+ | .+++++.|+.+++..... ++..+++ .++.+++.++|+||+++
T Consensus 152 ~l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~---el~~~~i---~~l~~~l~~aDiVv~~t 223 (340)
T PRK14982 152 DLSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQA---ELGGGKI---LSLEEALPEADIVVWVA 223 (340)
T ss_pred CcCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHH---HhccccH---HhHHHHHccCCEEEECC
Confidence 456799999999999999999999864 5 589999998776543321 1112333 34678899999999983
|
|
| >PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase | Back alignment and domain information |
|---|
Probab=97.82 E-value=4.4e-05 Score=73.01 Aligned_cols=98 Identities=17% Similarity=0.153 Sum_probs=62.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHC-CCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHH-HhcCccEEEEcCCc-h
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVK-RTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKT-ALRGVRSIICPSEG-F 174 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~-g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~-~~~~~d~vi~~~~g-~ 174 (306)
+.++|.|.||||++|+++++.|..+ .++|..+.++.+.-+............|+.+.+.++. .++++|+||.+.+. .
T Consensus 37 ~~~kVaIvGATG~vG~eLlrlL~~hP~~el~~l~s~~saG~~i~~~~~~l~~~~~~~~~~~~~~~~~~~DvVf~Alp~~~ 116 (381)
T PLN02968 37 EKKRIFVLGASGYTGAEVRRLLANHPDFEITVMTADRKAGQSFGSVFPHLITQDLPNLVAVKDADFSDVDAVFCCLPHGT 116 (381)
T ss_pred cccEEEEECCCChHHHHHHHHHHhCCCCeEEEEEChhhcCCCchhhCccccCccccceecCCHHHhcCCCEEEEcCCHHH
Confidence 5679999999999999999999988 5799999886543211110111222234443333332 26899999998443 2
Q ss_pred ---hhhcccccCCCEEEEecCccccc
Q 021854 175 ---ISNAGSLKGVQHVILLSQLSVYR 197 (306)
Q Consensus 175 ---~~~~a~~~gvkr~V~iSS~~~~~ 197 (306)
+...+ +.+ .++|-+|+..-..
T Consensus 117 s~~i~~~~-~~g-~~VIDlSs~fRl~ 140 (381)
T PLN02968 117 TQEIIKAL-PKD-LKIVDLSADFRLR 140 (381)
T ss_pred HHHHHHHH-hCC-CEEEEcCchhccC
Confidence 23333 344 5788888876443
|
|
| >KOG2733 consensus Uncharacterized membrane protein [Function unknown] | Back alignment and domain information |
|---|
Probab=97.78 E-value=4.6e-05 Score=70.80 Aligned_cols=75 Identities=13% Similarity=0.202 Sum_probs=62.0
Q ss_pred CCeEEEEcCCChHHHHHHHHHHH----CCCeEEEEecCcchhhhhc-------C---CCceeeeccCCCHHHHHHHhcCc
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIV----KRTRIKALVKDKRNAMESF-------G---TYVESMAGDASNKKFLKTALRGV 164 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~----~g~~V~~l~R~~~~~~~~~-------~---~~v~~v~~D~~d~~~l~~~~~~~ 164 (306)
.--++|.||+|+.|..+++.+++ .|...-+..|+.+|+.+-+ + ....++.+|..|++++.+..+.+
T Consensus 5 ~yDvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl~emak~~ 84 (423)
T KOG2733|consen 5 RYDVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSVILIADSANEASLDEMAKQA 84 (423)
T ss_pred eeeEEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCCcccceEEEecCCCHHHHHHHHhhh
Confidence 35689999999999999999998 7788989999998854321 1 12338899999999999999999
Q ss_pred cEEEEcCCc
Q 021854 165 RSIICPSEG 173 (306)
Q Consensus 165 d~vi~~~~g 173 (306)
.+|++|.+.
T Consensus 85 ~vivN~vGP 93 (423)
T KOG2733|consen 85 RVIVNCVGP 93 (423)
T ss_pred EEEEecccc
Confidence 999988553
|
|
| >PRK14874 aspartate-semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.76 E-value=0.00012 Score=68.99 Aligned_cols=89 Identities=17% Similarity=0.127 Sum_probs=56.8
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCC---eEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcCCch-
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKRT---RIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEGF- 174 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g~---~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~g~- 174 (306)
+++|+|.||||++|+++++.|.+++| +++++.|..+..+...-.+.+....|+.+. .++++|+||.+++..
T Consensus 1 ~~~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~~~g~~l~~~g~~i~v~d~~~~-----~~~~vDvVf~A~g~g~ 75 (334)
T PRK14874 1 GYNVAVVGATGAVGREMLNILEERNFPVDKLRLLASARSAGKELSFKGKELKVEDLTTF-----DFSGVDIALFSAGGSV 75 (334)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEccccCCCeeeeCCceeEEeeCCHH-----HHcCCCEEEECCChHH
Confidence 36899999999999999999999876 457777765432211111244555566532 346899999986543
Q ss_pred ---hhhcccccCCCEEEEecCc
Q 021854 175 ---ISNAGSLKGVQHVILLSQL 193 (306)
Q Consensus 175 ---~~~~a~~~gvkr~V~iSS~ 193 (306)
......++|+ .+|=.|+.
T Consensus 76 s~~~~~~~~~~G~-~VIDlS~~ 96 (334)
T PRK14874 76 SKKYAPKAAAAGA-VVIDNSSA 96 (334)
T ss_pred HHHHHHHHHhCCC-EEEECCch
Confidence 2222334555 45555654
|
|
| >PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus | Back alignment and domain information |
|---|
Probab=97.75 E-value=0.00022 Score=56.04 Aligned_cols=71 Identities=18% Similarity=0.251 Sum_probs=58.3
Q ss_pred EEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHH-hcCccEEEEcCCc
Q 021854 102 VLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA-LRGVRSIICPSEG 173 (306)
Q Consensus 102 ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~-~~~~d~vi~~~~g 173 (306)
|+|.|. |.+|+.++++|.+.+.+|+++.++++........++.++.+|.+|.+.++++ ++.++.++.+++.
T Consensus 1 vvI~G~-g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~a~~vv~~~~~ 72 (116)
T PF02254_consen 1 VVIIGY-GRIGREIAEQLKEGGIDVVVIDRDPERVEELREEGVEVIYGDATDPEVLERAGIEKADAVVILTDD 72 (116)
T ss_dssp EEEES--SHHHHHHHHHHHHTTSEEEEEESSHHHHHHHHHTTSEEEES-TTSHHHHHHTTGGCESEEEEESSS
T ss_pred eEEEcC-CHHHHHHHHHHHhCCCEEEEEECCcHHHHHHHhcccccccccchhhhHHhhcCccccCEEEEccCC
Confidence 688988 7899999999999777999999999886655556689999999999998874 5788999987543
|
The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A .... |
| >PRK09496 trkA potassium transporter peripheral membrane component; Reviewed | Back alignment and domain information |
|---|
Probab=97.75 E-value=0.00013 Score=71.13 Aligned_cols=89 Identities=12% Similarity=0.185 Sum_probs=69.6
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcC-CCceeeeccCCCHHHHHHH-hcCccEEEEcCCch---
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG-TYVESMAGDASNKKFLKTA-LRGVRSIICPSEGF--- 174 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~-~~v~~v~~D~~d~~~l~~~-~~~~d~vi~~~~g~--- 174 (306)
|+|+|.|+ |.+|+.+++.|.+.|++|+++.+++++...... .+++++.+|.++...++++ ++++|+||.+.+..
T Consensus 1 m~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~~~~~~~~~~~~~~~~~gd~~~~~~l~~~~~~~a~~vi~~~~~~~~n 79 (453)
T PRK09496 1 MKIIIVGA-GQVGYTLAENLSGENNDVTVIDTDEERLRRLQDRLDVRTVVGNGSSPDVLREAGAEDADLLIAVTDSDETN 79 (453)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhhcCEEEEEeCCCCHHHHHHcCCCcCCEEEEecCChHHH
Confidence 57999998 999999999999999999999999887654433 4688999999999999988 88999999874432
Q ss_pred --hhhccccc-CCCEEEE
Q 021854 175 --ISNAGSLK-GVQHVIL 189 (306)
Q Consensus 175 --~~~~a~~~-gvkr~V~ 189 (306)
....++.. +..++|.
T Consensus 80 ~~~~~~~r~~~~~~~ii~ 97 (453)
T PRK09496 80 MVACQIAKSLFGAPTTIA 97 (453)
T ss_pred HHHHHHHHHhcCCCeEEE
Confidence 22334443 5555554
|
|
| >PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases | Back alignment and domain information |
|---|
Probab=97.70 E-value=8.2e-05 Score=60.74 Aligned_cols=71 Identities=20% Similarity=0.257 Sum_probs=53.1
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCe-EEEEecCcchhhhh---cC-CCceeeeccCCCHHHHHHHhcCccEEEEc
Q 021854 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTR-IKALVKDKRNAMES---FG-TYVESMAGDASNKKFLKTALRGVRSIICP 170 (306)
Q Consensus 96 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~-V~~l~R~~~~~~~~---~~-~~v~~v~~D~~d~~~l~~~~~~~d~vi~~ 170 (306)
...+++++|.|| |++|+.++.+|...|++ |+++.|+.+++.+. ++ ..+.++ ++ +++...+..+|+||++
T Consensus 9 ~l~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~--~~---~~~~~~~~~~DivI~a 82 (135)
T PF01488_consen 9 DLKGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAI--PL---EDLEEALQEADIVINA 82 (135)
T ss_dssp TGTTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEE--EG---GGHCHHHHTESEEEE-
T ss_pred CcCCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCcccccee--eH---HHHHHHHhhCCeEEEe
Confidence 456899999998 99999999999999986 99999999885543 32 123333 33 3444778899999998
Q ss_pred CC
Q 021854 171 SE 172 (306)
Q Consensus 171 ~~ 172 (306)
++
T Consensus 83 T~ 84 (135)
T PF01488_consen 83 TP 84 (135)
T ss_dssp SS
T ss_pred cC
Confidence 33
|
Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C .... |
| >cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases | Back alignment and domain information |
|---|
Probab=97.69 E-value=8.6e-05 Score=69.62 Aligned_cols=74 Identities=12% Similarity=-0.003 Sum_probs=50.3
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCC-------CeEEEEecCcch--hhhhc---CCCceeeeccCCCHHHHHHHhcCccE
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKR-------TRIKALVKDKRN--AMESF---GTYVESMAGDASNKKFLKTALRGVRS 166 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g-------~~V~~l~R~~~~--~~~~~---~~~v~~v~~D~~d~~~l~~~~~~~d~ 166 (306)
..+|+||||+|++|+.++..|+..+ .+|+++.++... +.... .+-......|+....++.+.++++|+
T Consensus 2 ~~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl~d~~~~~~~~~~~~~~~~~~l~~aDi 81 (325)
T cd01336 2 PIRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMELQDCAFPLLKSVVATTDPEEAFKDVDV 81 (325)
T ss_pred CeEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeehhhccccccCCceecCCHHHHhCCCCE
Confidence 3679999999999999999999854 489999886532 21100 00000112344445667788999999
Q ss_pred EEEcCC
Q 021854 167 IICPSE 172 (306)
Q Consensus 167 vi~~~~ 172 (306)
|||+++
T Consensus 82 VI~tAG 87 (325)
T cd01336 82 AILVGA 87 (325)
T ss_pred EEEeCC
Confidence 999843
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated | Back alignment and domain information |
|---|
Probab=97.68 E-value=0.00019 Score=69.02 Aligned_cols=170 Identities=11% Similarity=0.078 Sum_probs=95.3
Q ss_pred cCCCeEEEEcC----------------CChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHH
Q 021854 97 EARDAVLVTDG----------------DSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA 160 (306)
Q Consensus 97 ~~~~~ilVtGa----------------tG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~ 160 (306)
..+++|+|||| +|.+|.++++.|+.+|++|+++.++.+ .. .+.+ +...|+++.+++.++
T Consensus 186 l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~-~~--~~~~--~~~~dv~~~~~~~~~ 260 (399)
T PRK05579 186 LAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVN-LP--TPAG--VKRIDVESAQEMLDA 260 (399)
T ss_pred cCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCcc-cc--CCCC--cEEEccCCHHHHHHH
Confidence 46799999999 888999999999999999999988763 11 1222 345789987776665
Q ss_pred h----cCccEEEEcCC--chhhhcccccCCCE------EEEecC------cccccCCC-CcccccchHHHHHHHHHHHHH
Q 021854 161 L----RGVRSIICPSE--GFISNAGSLKGVQH------VILLSQ------LSVYRGSG-GIQALMKGNARKLAEQDESML 221 (306)
Q Consensus 161 ~----~~~d~vi~~~~--g~~~~~a~~~gvkr------~V~iSS------~~~~~~~~-~~~~~~~~~a~~~~~~aE~~l 221 (306)
+ ..+|++|++++ .+........++|+ +=+.-. .....+.. -.-.|.. ........+..-|
T Consensus 261 v~~~~~~~DilI~~Aav~d~~~~~~~~~Kikk~~~~~~l~L~~~pdIl~~l~~~~~~~~~~VGFaa-Et~~~~~~A~~kl 339 (399)
T PRK05579 261 VLAALPQADIFIMAAAVADYRPATVAEGKIKKGEGELTLELVPNPDILAEVAALKDKRPFVVGFAA-ETGDVLEYARAKL 339 (399)
T ss_pred HHHhcCCCCEEEEcccccccccccccccCccCCCCCceEEEEeCcHHHHHHHhccCCCCEEEEEcc-CCchHHHHHHHHH
Confidence 5 46799999843 22111111111111 111111 11000100 0111111 0111234455667
Q ss_pred HhcCCCEEEEEcCcccCCCC--CCcceeee-cCCC-CccccCHHHHHHHHHHHhh
Q 021854 222 MASGIPYTIIRTGVLQNTPG--GKQGFQFE-EGCA-ANGSLSKEDAAFICVEALE 272 (306)
Q Consensus 222 ~~sgi~~tiiRPg~l~~~~~--~~~~~~~~-~g~~-~~~~Is~~DVA~~iv~aL~ 272 (306)
...++++++.+.-.-....+ ......+. .+.. ..+..+..++|+.++..+.
T Consensus 340 ~~k~~D~ivaN~i~~~~~fg~~~n~~~ii~~~~~~~~~~~~~K~~iA~~i~~~i~ 394 (399)
T PRK05579 340 KRKGLDLIVANDVSAGGGFGSDDNEVTLIWSDGGEVKLPLMSKLELARRLLDEIA 394 (399)
T ss_pred HHcCCeEEEEecCCcCCCcCCCceEEEEEECCCcEEEcCCCCHHHHHHHHHHHHH
Confidence 78999999888632111111 22223332 2322 2456788999999998764
|
|
| >COG0623 FabI Enoyl-[acyl-carrier-protein] | Back alignment and domain information |
|---|
Probab=97.66 E-value=0.002 Score=56.91 Aligned_cols=186 Identities=14% Similarity=0.115 Sum_probs=110.1
Q ss_pred cCCCeEEEEcCCC--hHHHHHHHHHHHCCCeEEEEecCcch---hhhhcC--CCceeeeccCCCHHHHHHHhc-------
Q 021854 97 EARDAVLVTDGDS--DIGQMVILSLIVKRTRIKALVKDKRN---AMESFG--TYVESMAGDASNKKFLKTALR------- 162 (306)
Q Consensus 97 ~~~~~ilVtGatG--~iG~~l~~~L~~~g~~V~~l~R~~~~---~~~~~~--~~v~~v~~D~~d~~~l~~~~~------- 162 (306)
+.+|++||+|-.. +|+..|+++|.++|.++........- ..++.+ ....++++|++|.++++.+|+
T Consensus 4 L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e~l~krv~~la~~~~s~~v~~cDV~~d~~i~~~f~~i~~~~g 83 (259)
T COG0623 4 LEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGERLEKRVEELAEELGSDLVLPCDVTNDESIDALFATIKKKWG 83 (259)
T ss_pred cCCceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHHHhhccCCeEEecCCCCHHHHHHHHHHHHHhhC
Confidence 4589999999765 79999999999999999888776621 111111 124578999999888877775
Q ss_pred CccEEEEc---CC-----chhh-------------------hcccc-----cCCCEEEEec---CcccccCCCCcccccc
Q 021854 163 GVRSIICP---SE-----GFIS-------------------NAGSL-----KGVQHVILLS---QLSVYRGSGGIQALMK 207 (306)
Q Consensus 163 ~~d~vi~~---~~-----g~~~-------------------~~a~~-----~gvkr~V~iS---S~~~~~~~~~~~~~~~ 207 (306)
..|.++|+ ++ |... .+++. .+-..+|-++ +..+.+..+.|.
T Consensus 84 ~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~ggSiltLtYlgs~r~vPnYNvMG---- 159 (259)
T COG0623 84 KLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMNNGGSILTLTYLGSERVVPNYNVMG---- 159 (259)
T ss_pred cccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCCCCcEEEEEeccceeecCCCchhH----
Confidence 45999998 33 1111 11111 1122344333 333332333321
Q ss_pred hHHHHHHHHHHHHHHh----cCCCEEEEEcCcccCCCC----CCcce-ee-ecCCCCccccCHHHHHHHHHHHhhCC--C
Q 021854 208 GNARKLAEQDESMLMA----SGIPYTIIRTGVLQNTPG----GKQGF-QF-EEGCAANGSLSKEDAAFICVEALESI--P 275 (306)
Q Consensus 208 ~~a~~~~~~aE~~l~~----sgi~~tiiRPg~l~~~~~----~~~~~-~~-~~g~~~~~~Is~~DVA~~iv~aL~~~--~ 275 (306)
-++...+..-+||.. .||++.-|..|.+..-.. ....+ .. .........++.|||+...+.++.+- .
T Consensus 160 -vAKAaLEasvRyLA~dlG~~gIRVNaISAGPIrTLAasgI~~f~~~l~~~e~~aPl~r~vt~eeVG~tA~fLlSdLssg 238 (259)
T COG0623 160 -VAKAALEASVRYLAADLGKEGIRVNAISAGPIRTLAASGIGDFRKMLKENEANAPLRRNVTIEEVGNTAAFLLSDLSSG 238 (259)
T ss_pred -HHHHHHHHHHHHHHHHhCccCeEEeeecccchHHHHhhccccHHHHHHHHHhhCCccCCCCHHHhhhhHHHHhcchhcc
Confidence 233334444455543 588888888877542111 10000 00 11122245678999999999999753 3
Q ss_pred CCCcEEEEecCC
Q 021854 276 QTGLIFEVVNGE 287 (306)
Q Consensus 276 ~~g~~~~v~~g~ 287 (306)
-.|++.+|.+|-
T Consensus 239 iTGei~yVD~G~ 250 (259)
T COG0623 239 ITGEIIYVDSGY 250 (259)
T ss_pred cccceEEEcCCc
Confidence 568888888764
|
|
| >TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic | Back alignment and domain information |
|---|
Probab=97.57 E-value=0.0028 Score=60.86 Aligned_cols=168 Identities=13% Similarity=0.123 Sum_probs=92.0
Q ss_pred cCCCeEEEEcC----------------CChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHH-HH
Q 021854 97 EARDAVLVTDG----------------DSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFL-KT 159 (306)
Q Consensus 97 ~~~~~ilVtGa----------------tG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l-~~ 159 (306)
..+++|+|||| ||.+|.++++.|..+|++|+++.+..+.. .+..+ ...|+.+.+++ +.
T Consensus 183 ~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~---~~~~~--~~~~v~~~~~~~~~ 257 (390)
T TIGR00521 183 LEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLL---TPPGV--KSIKVSTAEEMLEA 257 (390)
T ss_pred cCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccC---CCCCc--EEEEeccHHHHHHH
Confidence 45799999999 35699999999999999999998776431 22233 45788887776 44
Q ss_pred Hh----cCccEEEEcCC--chhhhcccccCCCE------EEEecC------cccccCCCCcccccchHHHH-HHHHHHHH
Q 021854 160 AL----RGVRSIICPSE--GFISNAGSLKGVQH------VILLSQ------LSVYRGSGGIQALMKGNARK-LAEQDESM 220 (306)
Q Consensus 160 ~~----~~~d~vi~~~~--g~~~~~a~~~gvkr------~V~iSS------~~~~~~~~~~~~~~~~~a~~-~~~~aE~~ 220 (306)
++ ..+|++|++++ .+........++++ +=+... .....+...+-.|.. .... ....+..-
T Consensus 258 ~~~~~~~~~D~~i~~Aavsd~~~~~~~~~Ki~~~~~~~~l~L~~~pdil~~l~~~~~~~~lvgF~a-Et~~~l~~~A~~k 336 (390)
T TIGR00521 258 ALNELAKDFDIFISAAAVADFKPKTVFEGKIKKQGEELSLKLVKNPDIIAEVRKIKKHQVIVGFKA-ETNDDLIKYAKEK 336 (390)
T ss_pred HHHhhcccCCEEEEccccccccccccccccccccCCceeEEEEeCcHHHHHHHhhCCCcEEEEEEc-CCCcHHHHHHHHH
Confidence 44 46799998843 11110001111111 111111 110001000111110 0001 34456677
Q ss_pred HHhcCCCEEEEEcCcccCCCC--CCcceeee-cCCCCccccCHHHHHHHHHHHh
Q 021854 221 LMASGIPYTIIRTGVLQNTPG--GKQGFQFE-EGCAANGSLSKEDAAFICVEAL 271 (306)
Q Consensus 221 l~~sgi~~tiiRPg~l~~~~~--~~~~~~~~-~g~~~~~~Is~~DVA~~iv~aL 271 (306)
++..+.++++.+.-... ..+ ......+. .+....+..+..++|+.++..+
T Consensus 337 l~~k~~D~ivaN~i~~~-~fg~~~n~~~li~~~~~~~~~~~~K~~iA~~i~~~~ 389 (390)
T TIGR00521 337 LKKKNLDMIVANDVSQR-GFGSDENEVYIFSKHGHKELPLMSKLEVAERILDEI 389 (390)
T ss_pred HHHcCCCEEEEccCCcc-ccCCCCcEEEEEECCCeEEeCCCCHHHHHHHHHHHh
Confidence 88899999988753210 111 22222232 2223345568899999988765
|
This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity. |
| >PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.00056 Score=64.51 Aligned_cols=93 Identities=15% Similarity=0.178 Sum_probs=64.6
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEecCc---------------------chh-------hhhcC-CCce
Q 021854 96 EEARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDK---------------------RNA-------MESFG-TYVE 145 (306)
Q Consensus 96 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~l~R~~---------------------~~~-------~~~~~-~~v~ 145 (306)
..+.++|+|.|+ |++|+++++.|+..|. +++++.++. .|+ .+..+ ..++
T Consensus 21 ~L~~~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v~i~ 99 (338)
T PRK12475 21 KIREKHVLIVGA-GALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEVEIV 99 (338)
T ss_pred hhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCcEEE
Confidence 445789999998 8899999999999997 777777764 111 11112 2455
Q ss_pred eeeccCCCHHHHHHHhcCccEEEEcCCch-----hhhcccccCCCEEEEec
Q 021854 146 SMAGDASNKKFLKTALRGVRSIICPSEGF-----ISNAGSLKGVQHVILLS 191 (306)
Q Consensus 146 ~v~~D~~d~~~l~~~~~~~d~vi~~~~g~-----~~~~a~~~gvkr~V~iS 191 (306)
.+..|++ .+.++++++++|+||.++..+ +.+++.+.+++ +|+.+
T Consensus 100 ~~~~~~~-~~~~~~~~~~~DlVid~~D~~~~r~~in~~~~~~~ip-~i~~~ 148 (338)
T PRK12475 100 PVVTDVT-VEELEELVKEVDLIIDATDNFDTRLLINDLSQKYNIP-WIYGG 148 (338)
T ss_pred EEeccCC-HHHHHHHhcCCCEEEEcCCCHHHHHHHHHHHHHcCCC-EEEEE
Confidence 6666765 467888899999999885543 34566777765 44443
|
|
| >PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase | Back alignment and domain information |
|---|
Probab=97.50 E-value=0.00054 Score=72.87 Aligned_cols=95 Identities=15% Similarity=0.092 Sum_probs=70.2
Q ss_pred CccCCCeEEEEcCCChHHHHHHHHHHHCC-Ce-------------EEEEecCcchhhhhcC--CCceeeeccCCCHHHHH
Q 021854 95 PEEARDAVLVTDGDSDIGQMVILSLIVKR-TR-------------IKALVKDKRNAMESFG--TYVESMAGDASNKKFLK 158 (306)
Q Consensus 95 ~~~~~~~ilVtGatG~iG~~l~~~L~~~g-~~-------------V~~l~R~~~~~~~~~~--~~v~~v~~D~~d~~~l~ 158 (306)
....+++|+|.|| |.||+.+++.|++.. ++ |.+.+++.+.++.... ++++.+..|+.|.+++.
T Consensus 565 ~~~~~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~~~~~~v~lDv~D~e~L~ 643 (1042)
T PLN02819 565 VTKKSQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGIENAEAVQLDVSDSESLL 643 (1042)
T ss_pred ccccCCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhcCCCceEEeecCCHHHHH
Confidence 3445789999998 999999999998753 33 6667767665443322 36788999999999999
Q ss_pred HHhcCccEEEEcCCch----hhhcccccCCCEEEEec
Q 021854 159 TALRGVRSIICPSEGF----ISNAGSLKGVQHVILLS 191 (306)
Q Consensus 159 ~~~~~~d~vi~~~~g~----~~~~a~~~gvkr~V~iS 191 (306)
++++++|+||.+.+.. ++.+|.++|+ |++-.|
T Consensus 644 ~~v~~~DaVIsalP~~~H~~VAkaAieaGk-Hvv~ek 679 (1042)
T PLN02819 644 KYVSQVDVVISLLPASCHAVVAKACIELKK-HLVTAS 679 (1042)
T ss_pred HhhcCCCEEEECCCchhhHHHHHHHHHcCC-CEEECc
Confidence 9999999999986543 4555666664 555444
|
|
| >PRK05086 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.48 E-value=0.00056 Score=63.81 Aligned_cols=92 Identities=13% Similarity=0.060 Sum_probs=59.0
Q ss_pred CeEEEEcCCChHHHHHHHHHHH-C--CCeEEEEecCcchh---hhhcC-CCceeeeccCCCHHHHHHHhcCccEEEEcCC
Q 021854 100 DAVLVTDGDSDIGQMVILSLIV-K--RTRIKALVKDKRNA---MESFG-TYVESMAGDASNKKFLKTALRGVRSIICPSE 172 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~-~--g~~V~~l~R~~~~~---~~~~~-~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~ 172 (306)
|+|+|+||+|.+|++++..|.. . ++.++++.|++... .+... .....+.+ .+.+++.+.++++|+||.+++
T Consensus 1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~~~g~alDl~~~~~~~~i~~--~~~~d~~~~l~~~DiVIitaG 78 (312)
T PRK05086 1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPVTPGVAVDLSHIPTAVKIKG--FSGEDPTPALEGADVVLISAG 78 (312)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCCCcceehhhhcCCCCceEEE--eCCCCHHHHcCCCCEEEEcCC
Confidence 6899999999999999988854 2 35778877764321 11111 11122232 122345567899999998833
Q ss_pred c-----h---------------hhhcccccCCCEEEEecCc
Q 021854 173 G-----F---------------ISNAGSLKGVQHVILLSQL 193 (306)
Q Consensus 173 g-----~---------------~~~~a~~~gvkr~V~iSS~ 193 (306)
. . +.+.+.+++.+++|.+.|.
T Consensus 79 ~~~~~~~~R~dll~~N~~i~~~ii~~i~~~~~~~ivivvsN 119 (312)
T PRK05086 79 VARKPGMDRSDLFNVNAGIVKNLVEKVAKTCPKACIGIITN 119 (312)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccC
Confidence 1 1 2344666888999988874
|
|
| >PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated | Back alignment and domain information |
|---|
Probab=97.45 E-value=0.00049 Score=65.03 Aligned_cols=93 Identities=13% Similarity=-0.019 Sum_probs=57.2
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHC-CCeEEEEecCcch---hhhhcCCCceee-eccCCCHHHHHHHhcCccEEEEcCCc
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVK-RTRIKALVKDKRN---AMESFGTYVESM-AGDASNKKFLKTALRGVRSIICPSEG 173 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~-g~~V~~l~R~~~~---~~~~~~~~v~~v-~~D~~d~~~l~~~~~~~d~vi~~~~g 173 (306)
+++|+|.||||.+|+++++.|.+. +++++++++..+. ..+.++ .+..+ ..++.+.+.. .+.++|+||++.+.
T Consensus 2 m~kVaIiGAtG~vG~~l~~~L~~~p~~elv~v~~~~~~g~~l~~~~~-~~~~~~~~~~~~~~~~--~~~~vD~Vf~alP~ 78 (343)
T PRK00436 2 MIKVGIVGASGYTGGELLRLLLNHPEVEIVAVTSRSSAGKPLSDVHP-HLRGLVDLVLEPLDPE--ILAGADVVFLALPH 78 (343)
T ss_pred CeEEEEECCCCHHHHHHHHHHHcCCCceEEEEECccccCcchHHhCc-ccccccCceeecCCHH--HhcCCCEEEECCCc
Confidence 579999999999999999999986 5788887774432 111121 12111 2233333322 45789999998553
Q ss_pred h----hhhcccccCCCEEEEecCccc
Q 021854 174 F----ISNAGSLKGVQHVILLSQLSV 195 (306)
Q Consensus 174 ~----~~~~a~~~gvkr~V~iSS~~~ 195 (306)
. +...+.++| +++|=.|+..-
T Consensus 79 ~~~~~~v~~a~~aG-~~VID~S~~fR 103 (343)
T PRK00436 79 GVSMDLAPQLLEAG-VKVIDLSADFR 103 (343)
T ss_pred HHHHHHHHHHHhCC-CEEEECCcccC
Confidence 3 223333444 46777776543
|
|
| >PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.00032 Score=56.07 Aligned_cols=87 Identities=20% Similarity=0.172 Sum_probs=51.5
Q ss_pred eEEEEcCCChHHHHHHHHHHHCC-CeEEEEecCcc-h---hhhhcC--CCc-eeeeccCCCHHHHHHHhcCccEEEEcCC
Q 021854 101 AVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKR-N---AMESFG--TYV-ESMAGDASNKKFLKTALRGVRSIICPSE 172 (306)
Q Consensus 101 ~ilVtGatG~iG~~l~~~L~~~g-~~V~~l~R~~~-~---~~~~~~--~~v-~~v~~D~~d~~~l~~~~~~~d~vi~~~~ 172 (306)
+|.|.||||++|+++++.|.+.- ++++.+....+ . ....++ ... ....-+ .+.+ .+.++|+||+|.+
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~----~~~~~Dvvf~a~~ 75 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHPKGFEDLSVED-ADPE----ELSDVDVVFLALP 75 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGGTTTEEEBEEE-TSGH----HHTTESEEEE-SC
T ss_pred CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhccccccccceeEee-cchh----HhhcCCEEEecCc
Confidence 68999999999999999999854 46666555444 2 222222 111 122222 2322 3589999999966
Q ss_pred ch----hhhcccccCCCEEEEecCc
Q 021854 173 GF----ISNAGSLKGVQHVILLSQL 193 (306)
Q Consensus 173 g~----~~~~a~~~gvkr~V~iSS~ 193 (306)
.. ......+.|+ ++|=.|+.
T Consensus 76 ~~~~~~~~~~~~~~g~-~ViD~s~~ 99 (121)
T PF01118_consen 76 HGASKELAPKLLKAGI-KVIDLSGD 99 (121)
T ss_dssp HHHHHHHHHHHHHTTS-EEEESSST
T ss_pred hhHHHHHHHHHhhCCc-EEEeCCHH
Confidence 43 3333455666 55555554
|
This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C .... |
| >PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated | Back alignment and domain information |
|---|
Probab=97.36 E-value=0.0014 Score=61.87 Aligned_cols=94 Identities=19% Similarity=0.294 Sum_probs=64.5
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEecCc---------------------chhh---h---hcCC--Cce
Q 021854 96 EEARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDK---------------------RNAM---E---SFGT--YVE 145 (306)
Q Consensus 96 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~l~R~~---------------------~~~~---~---~~~~--~v~ 145 (306)
.....+|+|.|+ |++|++++..|+..|. +++++.++. .|+. + ...+ .++
T Consensus 21 ~L~~~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~inp~v~v~ 99 (339)
T PRK07688 21 KLREKHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEINSDVRVE 99 (339)
T ss_pred HhcCCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHCCCcEEE
Confidence 445789999999 9999999999999997 888887753 1110 1 1122 344
Q ss_pred eeeccCCCHHHHHHHhcCccEEEEcCCch-----hhhcccccCCCEEEEecC
Q 021854 146 SMAGDASNKKFLKTALRGVRSIICPSEGF-----ISNAGSLKGVQHVILLSQ 192 (306)
Q Consensus 146 ~v~~D~~d~~~l~~~~~~~d~vi~~~~g~-----~~~~a~~~gvkr~V~iSS 192 (306)
.+..+++ .+.+.+.++++|+||.++..+ +.++|.+.+++ +|+.+.
T Consensus 100 ~~~~~~~-~~~~~~~~~~~DlVid~~Dn~~~r~~ln~~~~~~~iP-~i~~~~ 149 (339)
T PRK07688 100 AIVQDVT-AEELEELVTGVDLIIDATDNFETRFIVNDAAQKYGIP-WIYGAC 149 (339)
T ss_pred EEeccCC-HHHHHHHHcCCCEEEEcCCCHHHHHHHHHHHHHhCCC-EEEEee
Confidence 5555664 466778899999999885543 44667777765 445443
|
|
| >COG3268 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=97.36 E-value=0.00043 Score=64.01 Aligned_cols=75 Identities=9% Similarity=0.006 Sum_probs=60.1
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhh---hcCCCceeeeccCCCHHHHHHHhcCccEEEEcCCc
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG 173 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~---~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~g 173 (306)
++...++|.||+||.|.-++++|+++|.+-.+-.|+..++.. .++.+ +-..++.+++.+++...+.++|++|.+.
T Consensus 4 e~e~d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~~LG~~--~~~~p~~~p~~~~~~~~~~~VVlncvGP 81 (382)
T COG3268 4 EREYDIIIYGATGYAGGLVAEYLAREGLTAALAGRSSAKLDALRASLGPE--AAVFPLGVPAALEAMASRTQVVLNCVGP 81 (382)
T ss_pred CcceeEEEEccccchhHHHHHHHHHcCCchhhccCCHHHHHHHHHhcCcc--ccccCCCCHHHHHHHHhcceEEEecccc
Confidence 345789999999999999999999999988888999988543 23433 3344455589999999999999998553
|
|
| >PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.0005 Score=64.74 Aligned_cols=90 Identities=13% Similarity=0.098 Sum_probs=53.2
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEE--EecCcchhhhhcC-CCceeeeccCCCHHHHHHHhcCccEEEEcCCch-
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKA--LVKDKRNAMESFG-TYVESMAGDASNKKFLKTALRGVRSIICPSEGF- 174 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~--l~R~~~~~~~~~~-~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~g~- 174 (306)
+++|+|+||||.+|+++++.|.+++|.+.- ..++.+++-+... .+ ...++.+.+.. .++++|++|.+.+..
T Consensus 4 ~~~IaIvGATG~vG~eLlrlL~~~~hP~~~l~~v~s~~~aG~~l~~~~---~~l~~~~~~~~--~~~~vD~vFla~p~~~ 78 (336)
T PRK05671 4 PLDIAVVGATGTVGEALVQILEERDFPVGTLHLLASSESAGHSVPFAG---KNLRVREVDSF--DFSQVQLAFFAAGAAV 78 (336)
T ss_pred CCEEEEEccCCHHHHHHHHHHhhCCCCceEEEEEECcccCCCeeccCC---cceEEeeCChH--HhcCCCEEEEcCCHHH
Confidence 378999999999999999999987764433 2344333221111 11 12333332221 257899999985532
Q ss_pred ---hhhcccccCCCEEEEecCcc
Q 021854 175 ---ISNAGSLKGVQHVILLSQLS 194 (306)
Q Consensus 175 ---~~~~a~~~gvkr~V~iSS~~ 194 (306)
+...+.++|++ +|=.|+..
T Consensus 79 s~~~v~~~~~~G~~-VIDlS~~f 100 (336)
T PRK05671 79 SRSFAEKARAAGCS-VIDLSGAL 100 (336)
T ss_pred HHHHHHHHHHCCCe-EEECchhh
Confidence 34445556653 55556544
|
|
| >KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.29 E-value=0.0054 Score=54.74 Aligned_cols=67 Identities=15% Similarity=0.262 Sum_probs=54.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcch-----hhhhc-------CCCceeeeccCCCHHHHHHHhcCc
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-----AMESF-------GTYVESMAGDASNKKFLKTALRGV 164 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~-----~~~~~-------~~~v~~v~~D~~d~~~l~~~~~~~ 164 (306)
.+|..||||-||.=|+.+++.|+..||+|..+.|..+. .+.++ +...+..-+|++|...+.+.+.-+
T Consensus 27 ~rkvALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~~i 105 (376)
T KOG1372|consen 27 PRKVALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLISTI 105 (376)
T ss_pred cceEEEEecccCCCchHHHHHHHhCCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHhcc
Confidence 35789999999999999999999999999999998865 22222 235677889999998888887644
|
|
| >PRK09496 trkA potassium transporter peripheral membrane component; Reviewed | Back alignment and domain information |
|---|
Probab=97.28 E-value=0.0014 Score=63.94 Aligned_cols=94 Identities=19% Similarity=0.237 Sum_probs=71.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhc--CCCceeeeccCCCHHHHHH-HhcCccEEEEcCCch
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF--GTYVESMAGDASNKKFLKT-ALRGVRSIICPSEGF 174 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~--~~~v~~v~~D~~d~~~l~~-~~~~~d~vi~~~~g~ 174 (306)
..++|+|.|+ |.+|+.+++.|.+.|++|+++.+++++..... ..++.++.+|.++.+.+++ .++++|+||.+.+..
T Consensus 230 ~~~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~~~~~~~~~~~~~~~~~i~gd~~~~~~L~~~~~~~a~~vi~~~~~~ 308 (453)
T PRK09496 230 PVKRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERDPERAEELAEELPNTLVLHGDGTDQELLEEEGIDEADAFIALTNDD 308 (453)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHCCCCeEEECCCCCHHHHHhcCCccCCEEEECCCCc
Confidence 4689999999 99999999999999999999999987644332 2367889999999988855 457889998774432
Q ss_pred -----hhhcccccCCCEEEEecC
Q 021854 175 -----ISNAGSLKGVQHVILLSQ 192 (306)
Q Consensus 175 -----~~~~a~~~gvkr~V~iSS 192 (306)
....+++.+++++|....
T Consensus 309 ~~n~~~~~~~~~~~~~~ii~~~~ 331 (453)
T PRK09496 309 EANILSSLLAKRLGAKKVIALVN 331 (453)
T ss_pred HHHHHHHHHHHHhCCCeEEEEEC
Confidence 223456667777765544
|
|
| >TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E | Back alignment and domain information |
|---|
Probab=97.27 E-value=0.0017 Score=56.67 Aligned_cols=95 Identities=15% Similarity=0.209 Sum_probs=63.4
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEecCc-------------------chhh---h---hcCCCce--ee
Q 021854 96 EEARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDK-------------------RNAM---E---SFGTYVE--SM 147 (306)
Q Consensus 96 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~l~R~~-------------------~~~~---~---~~~~~v~--~v 147 (306)
.....+|+|.|+ |++|+++++.|+..|. +++++.++. .|+. + ...+.++ .+
T Consensus 18 kl~~~~VlviG~-GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~ 96 (202)
T TIGR02356 18 RLLNSHVLIIGA-GGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNSDIQVTAL 96 (202)
T ss_pred HhcCCCEEEECC-CHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCCCCEEEEe
Confidence 445789999998 8899999999999996 788877662 1110 0 1122333 33
Q ss_pred eccCCCHHHHHHHhcCccEEEEcCCch-----hhhcccccCCCEEEEecCc
Q 021854 148 AGDASNKKFLKTALRGVRSIICPSEGF-----ISNAGSLKGVQHVILLSQL 193 (306)
Q Consensus 148 ~~D~~d~~~l~~~~~~~d~vi~~~~g~-----~~~~a~~~gvkr~V~iSS~ 193 (306)
...+ +.+.+.+.++++|+||.+.... +.+.+.+.+++ +|+.+..
T Consensus 97 ~~~i-~~~~~~~~~~~~D~Vi~~~d~~~~r~~l~~~~~~~~ip-~i~~~~~ 145 (202)
T TIGR02356 97 KERV-TAENLELLINNVDLVLDCTDNFATRYLINDACVALGTP-LISAAVV 145 (202)
T ss_pred hhcC-CHHHHHHHHhCCCEEEECCCCHHHHHHHHHHHHHcCCC-EEEEEec
Confidence 3344 3466778899999999885433 44667777765 6665543
|
coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli. |
| >TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms) | Back alignment and domain information |
|---|
Probab=97.27 E-value=0.0008 Score=63.47 Aligned_cols=86 Identities=16% Similarity=0.161 Sum_probs=52.9
Q ss_pred eEEEEcCCChHHHHHHHHHHHCCCeEEE---EecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcCCch---
Q 021854 101 AVLVTDGDSDIGQMVILSLIVKRTRIKA---LVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEGF--- 174 (306)
Q Consensus 101 ~ilVtGatG~iG~~l~~~L~~~g~~V~~---l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~g~--- 174 (306)
+|+|.||||++|+++++.|.+++|.+.. +.+..+......-.+...+..|+. ...++++|+||.+++..
T Consensus 1 ~VaIvGAtG~vG~eLi~lL~~~~hp~~~l~~~as~~~~g~~~~~~~~~~~~~~~~-----~~~~~~~D~v~~a~g~~~s~ 75 (339)
T TIGR01296 1 NVAIVGATGAVGQEMLKILEERNFPIDKLVLLASDRSAGRKVTFKGKELEVNEAK-----IESFEGIDIALFSAGGSVSK 75 (339)
T ss_pred CEEEEcCCCHHHHHHHHHHHhCCCChhhEEEEeccccCCCeeeeCCeeEEEEeCC-----hHHhcCCCEEEECCCHHHHH
Confidence 5899999999999999999998876543 335543211111113455666664 22458999999986543
Q ss_pred -hhhcccccCCCEEEEecC
Q 021854 175 -ISNAGSLKGVQHVILLSQ 192 (306)
Q Consensus 175 -~~~~a~~~gvkr~V~iSS 192 (306)
......+.|+ ++|=.|+
T Consensus 76 ~~a~~~~~~G~-~VID~ss 93 (339)
T TIGR01296 76 EFAPKAAKCGA-IVIDNTS 93 (339)
T ss_pred HHHHHHHHCCC-EEEECCH
Confidence 2222334565 3554454
|
Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978. |
| >PRK04148 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.27 E-value=0.0014 Score=53.44 Aligned_cols=87 Identities=10% Similarity=0.037 Sum_probs=69.1
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcCCc-----
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG----- 173 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~g----- 173 (306)
+++|++.|. | .|..++..|.+.|++|+++..++...+......+.++..|+.++.- +.-+++|.|+.+.+.
T Consensus 17 ~~kileIG~-G-fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~~~~~~~v~dDlf~p~~--~~y~~a~liysirpp~el~~ 92 (134)
T PRK04148 17 NKKIVELGI-G-FYFKVAKKLKESGFDVIVIDINEKAVEKAKKLGLNAFVDDLFNPNL--EIYKNAKLIYSIRPPRDLQP 92 (134)
T ss_pred CCEEEEEEe-c-CCHHHHHHHHHCCCEEEEEECCHHHHHHHHHhCCeEEECcCCCCCH--HHHhcCCEEEEeCCCHHHHH
Confidence 578999998 5 8999999999999999999999987554444568899999998653 456789999988443
Q ss_pred hhhhcccccCCCEEEE
Q 021854 174 FISNAGSLKGVQHVIL 189 (306)
Q Consensus 174 ~~~~~a~~~gvkr~V~ 189 (306)
.+.+.+++.++.-+|.
T Consensus 93 ~~~~la~~~~~~~~i~ 108 (134)
T PRK04148 93 FILELAKKINVPLIIK 108 (134)
T ss_pred HHHHHHHHcCCCEEEE
Confidence 3677888888876654
|
|
| >PRK10669 putative cation:proton antiport protein; Provisional | Back alignment and domain information |
|---|
Probab=97.21 E-value=0.0018 Score=65.21 Aligned_cols=74 Identities=14% Similarity=0.194 Sum_probs=62.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHH-hcCccEEEEcCC
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA-LRGVRSIICPSE 172 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~-~~~~d~vi~~~~ 172 (306)
....|+|.|+ |.+|+.++++|.++|++|+++.+++++.++....+...+.+|.+|++.++++ ++++|+++.+.+
T Consensus 416 ~~~hiiI~G~-G~~G~~la~~L~~~g~~vvvId~d~~~~~~~~~~g~~~i~GD~~~~~~L~~a~i~~a~~viv~~~ 490 (558)
T PRK10669 416 ICNHALLVGY-GRVGSLLGEKLLAAGIPLVVIETSRTRVDELRERGIRAVLGNAANEEIMQLAHLDCARWLLLTIP 490 (558)
T ss_pred cCCCEEEECC-ChHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCCeEEEcCCCCHHHHHhcCccccCEEEEEcC
Confidence 3578999999 9999999999999999999999999886655456789999999999988764 578898887633
|
|
| >TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form | Back alignment and domain information |
|---|
Probab=97.14 E-value=0.0015 Score=61.77 Aligned_cols=92 Identities=12% Similarity=-0.001 Sum_probs=53.7
Q ss_pred CeEEEEcCCChHHHHHHHHHHHC-CCeEEEE-ecCc--ch-hhhhcCCCceee-eccCCCHHHHHHHhcCccEEEEcCCc
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVK-RTRIKAL-VKDK--RN-AMESFGTYVESM-AGDASNKKFLKTALRGVRSIICPSEG 173 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~-g~~V~~l-~R~~--~~-~~~~~~~~v~~v-~~D~~d~~~l~~~~~~~d~vi~~~~g 173 (306)
++|.|.||||.+|+++++.|.+. +++++.+ .++. .+ ..+.++ .+... ..++.+ .+.+++++++|+||++.+.
T Consensus 1 ~kVaIiGATG~vG~ellr~L~~hP~~el~~l~~s~~sagk~~~~~~~-~l~~~~~~~~~~-~~~~~~~~~~DvVf~alP~ 78 (346)
T TIGR01850 1 IKVAIVGASGYTGGELLRLLLNHPEVEITYLVSSRESAGKPVSEVHP-HLRGLVDLNLEP-IDEEEIAEDADVVFLALPH 78 (346)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCceEEEEeccchhcCCChHHhCc-cccccCCceeec-CCHHHhhcCCCEEEECCCc
Confidence 47999999999999999999976 5688754 3332 12 222232 11111 112221 1223344689999998543
Q ss_pred h----hhhcccccCCCEEEEecCcc
Q 021854 174 F----ISNAGSLKGVQHVILLSQLS 194 (306)
Q Consensus 174 ~----~~~~a~~~gvkr~V~iSS~~ 194 (306)
. +...+.++| +++|-.|+..
T Consensus 79 ~~s~~~~~~~~~~G-~~VIDlS~~f 102 (346)
T TIGR01850 79 GVSAELAPELLAAG-VKVIDLSADF 102 (346)
T ss_pred hHHHHHHHHHHhCC-CEEEeCChhh
Confidence 2 233333455 5788777754
|
This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons. |
| >PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.13 E-value=0.0017 Score=61.50 Aligned_cols=90 Identities=16% Similarity=0.145 Sum_probs=53.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEecCcchhhhhcCCCc------------eeeeccCCCHHHHHHHhcCc
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGTYV------------ESMAGDASNKKFLKTALRGV 164 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~l~R~~~~~~~~~~~~v------------~~v~~D~~d~~~l~~~~~~~ 164 (306)
|+.+|+|+||||++|+++++.|..... +++.+.++.+.........+ .-+...-.+.+. ++++
T Consensus 2 ~~~~V~I~GatG~iG~~l~~~L~~~p~~el~~~~~s~~~~G~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~----~~~~ 77 (349)
T PRK08664 2 MKLKVGILGATGMVGQRFVQLLANHPWFEVTALAASERSAGKTYGEAVRWQLDGPIPEEVADMEVVSTDPEA----VDDV 77 (349)
T ss_pred CCcEEEEECCCCHHHHHHHHHHHcCCCceEEEEEcChhhcCCcccccccccccccccccccceEEEeCCHHH----hcCC
Confidence 468999999999999999999987654 88888666544221111100 001111123332 4689
Q ss_pred cEEEEcCC-ch---hhhcccccCCCEEEEec
Q 021854 165 RSIICPSE-GF---ISNAGSLKGVQHVILLS 191 (306)
Q Consensus 165 d~vi~~~~-g~---~~~~a~~~gvkr~V~iS 191 (306)
|+||.+.+ +. ..+.+.+.|++.|.+.+
T Consensus 78 DvVf~a~p~~~s~~~~~~~~~~G~~vIDls~ 108 (349)
T PRK08664 78 DIVFSALPSDVAGEVEEEFAKAGKPVFSNAS 108 (349)
T ss_pred CEEEEeCChhHHHHHHHHHHHCCCEEEECCc
Confidence 99998743 22 33445567776444433
|
|
| >PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP | Back alignment and domain information |
|---|
Probab=97.13 E-value=0.004 Score=50.53 Aligned_cols=92 Identities=15% Similarity=0.155 Sum_probs=61.1
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEecCcch--------------------------hhhhcC-CCceeeecc
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRN--------------------------AMESFG-TYVESMAGD 150 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~l~R~~~~--------------------------~~~~~~-~~v~~v~~D 150 (306)
.++|+|.|+ |++|+++++.|+..|. +++++..+.=. +.+..| .+++.+..+
T Consensus 2 ~~~v~iiG~-G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~~ 80 (135)
T PF00899_consen 2 NKRVLIIGA-GGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPEK 80 (135)
T ss_dssp T-EEEEEST-SHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEESH
T ss_pred CCEEEEECc-CHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeecc
Confidence 479999999 8899999999999997 67766543311 011112 244555566
Q ss_pred CCCHHHHHHHhcCccEEEEcCCch-----hhhcccccCCCEEEEecCc
Q 021854 151 ASNKKFLKTALRGVRSIICPSEGF-----ISNAGSLKGVQHVILLSQL 193 (306)
Q Consensus 151 ~~d~~~l~~~~~~~d~vi~~~~g~-----~~~~a~~~gvkr~V~iSS~ 193 (306)
+ +.+.+.+.++++|+||.+.... +.+.+.+.+. .+|..+..
T Consensus 81 ~-~~~~~~~~~~~~d~vi~~~d~~~~~~~l~~~~~~~~~-p~i~~~~~ 126 (135)
T PF00899_consen 81 I-DEENIEELLKDYDIVIDCVDSLAARLLLNEICREYGI-PFIDAGVN 126 (135)
T ss_dssp C-SHHHHHHHHHTSSEEEEESSSHHHHHHHHHHHHHTT--EEEEEEEE
T ss_pred c-ccccccccccCCCEEEEecCCHHHHHHHHHHHHHcCC-CEEEEEee
Confidence 6 4577788889999999885443 4456677776 46666544
|
Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A .... |
| >PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional | Back alignment and domain information |
|---|
Probab=97.07 E-value=0.0054 Score=62.29 Aligned_cols=74 Identities=19% Similarity=0.229 Sum_probs=63.1
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHH-hcCccEEEEcCCc
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA-LRGVRSIICPSEG 173 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~-~~~~d~vi~~~~g 173 (306)
...|+|.|. |.+|+.+++.|.++|++++++.+++++.+.....+..++.+|.+|++.++++ ++++|++|.+.+.
T Consensus 400 ~~~vII~G~-Gr~G~~va~~L~~~g~~vvvID~d~~~v~~~~~~g~~v~~GDat~~~~L~~agi~~A~~vv~~~~d 474 (601)
T PRK03659 400 KPQVIIVGF-GRFGQVIGRLLMANKMRITVLERDISAVNLMRKYGYKVYYGDATQLELLRAAGAEKAEAIVITCNE 474 (601)
T ss_pred cCCEEEecC-chHHHHHHHHHHhCCCCEEEEECCHHHHHHHHhCCCeEEEeeCCCHHHHHhcCCccCCEEEEEeCC
Confidence 578999998 9999999999999999999999999876554445788999999999998875 6788999987443
|
|
| >PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism | Back alignment and domain information |
|---|
Probab=97.06 E-value=0.0023 Score=55.19 Aligned_cols=61 Identities=10% Similarity=0.071 Sum_probs=39.0
Q ss_pred CCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCC--HHHHHHHhcCccEEEEc
Q 021854 107 GDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASN--KKFLKTALRGVRSIICP 170 (306)
Q Consensus 107 atG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d--~~~l~~~~~~~d~vi~~ 170 (306)
.||..|.+|++.+..+|++|+++..... .. .+.+++.+...-.+ .+.+.+.+..+|++|++
T Consensus 27 SSG~~G~~lA~~~~~~Ga~V~li~g~~~-~~--~p~~~~~i~v~sa~em~~~~~~~~~~~Di~I~a 89 (185)
T PF04127_consen 27 SSGKMGAALAEEAARRGAEVTLIHGPSS-LP--PPPGVKVIRVESAEEMLEAVKELLPSADIIIMA 89 (185)
T ss_dssp --SHHHHHHHHHHHHTT-EEEEEE-TTS-------TTEEEEE-SSHHHHHHHHHHHGGGGSEEEE-
T ss_pred CcCHHHHHHHHHHHHCCCEEEEEecCcc-cc--ccccceEEEecchhhhhhhhccccCcceeEEEe
Confidence 4789999999999999999999988742 11 24567766644322 23455566778999998
|
These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A. |
| >TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit | Back alignment and domain information |
|---|
Probab=97.06 E-value=0.0028 Score=58.41 Aligned_cols=73 Identities=8% Similarity=0.002 Sum_probs=54.9
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcCCch
Q 021854 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEGF 174 (306)
Q Consensus 96 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~g~ 174 (306)
...+++++|+|+ |.+|+.+++.|...|++|++..|+.++.......+... .+.+.+.+.++++|+||++.+..
T Consensus 148 ~l~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~~~~~~~g~~~-----~~~~~l~~~l~~aDiVint~P~~ 220 (287)
T TIGR02853 148 TIHGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADLARITEMGLIP-----FPLNKLEEKVAEIDIVINTIPAL 220 (287)
T ss_pred CCCCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCee-----ecHHHHHHHhccCCEEEECCChH
Confidence 345799999999 88999999999999999999999987643322212221 23456778889999999885543
|
This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA. |
| >cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase | Back alignment and domain information |
|---|
Probab=97.03 E-value=0.0016 Score=53.80 Aligned_cols=71 Identities=14% Similarity=0.041 Sum_probs=49.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCC-CeEEEEecCcchhhhhcCC-CceeeeccCCCHHHHHHHhcCccEEEEcCC
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAMESFGT-YVESMAGDASNKKFLKTALRGVRSIICPSE 172 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~l~R~~~~~~~~~~~-~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~ 172 (306)
.+++|+|+|+ |.+|..+++.|.+.| ++|.+..|+.++..+.... ....+..+..+. .+.++++|+||++++
T Consensus 18 ~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~Dvvi~~~~ 90 (155)
T cd01065 18 KGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELGIAIAYLDL---EELLAEADLIINTTP 90 (155)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcccceeecch---hhccccCCEEEeCcC
Confidence 3589999998 999999999999996 7899999988764432211 111112233333 344789999999844
|
Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann |
| >PRK00258 aroE shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.99 E-value=0.0011 Score=60.70 Aligned_cols=71 Identities=18% Similarity=0.142 Sum_probs=49.8
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCC-CeEEEEecCcchhhhhcCC--CceeeeccCCCHHHHHHHhcCccEEEEcCC
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAMESFGT--YVESMAGDASNKKFLKTALRGVRSIICPSE 172 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~l~R~~~~~~~~~~~--~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~ 172 (306)
..+++++|+|+ |++|++++..|...| .+|+++.|+.+++.+.... ....+..+. .....+.++|+||++++
T Consensus 121 ~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~~~----~~~~~~~~~DivInaTp 194 (278)
T PRK00258 121 LKGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGKAELDL----ELQEELADFDLIINATS 194 (278)
T ss_pred CCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccceeecc----cchhccccCCEEEECCc
Confidence 45689999998 999999999999999 7999999998875433211 110011111 22356678999999843
|
|
| >TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal | Back alignment and domain information |
|---|
Probab=96.97 E-value=0.0013 Score=58.58 Aligned_cols=66 Identities=5% Similarity=0.082 Sum_probs=44.6
Q ss_pred eEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHH-------hcCccEEEEcCC
Q 021854 101 AVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA-------LRGVRSIICPSE 172 (306)
Q Consensus 101 ~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~-------~~~~d~vi~~~~ 172 (306)
|.+=..++|+||+++++.|+++|++|+++.|... .. +. ....+|+.+.+++.++ +..+|++||+++
T Consensus 17 R~itN~SSGgIG~AIA~~la~~Ga~Vvlv~~~~~-l~---~~--~~~~~Dv~d~~s~~~l~~~v~~~~g~iDiLVnnAg 89 (227)
T TIGR02114 17 RSITNHSTGHLGKIITETFLSAGHEVTLVTTKRA-LK---PE--PHPNLSIREIETTKDLLITLKELVQEHDILIHSMA 89 (227)
T ss_pred eeecCCcccHHHHHHHHHHHHCCCEEEEEcChhh-cc---cc--cCCcceeecHHHHHHHHHHHHHHcCCCCEEEECCE
Confidence 3333345889999999999999999999876321 11 10 1234688876665543 346799999844
|
In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity. |
| >PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=96.94 E-value=0.0037 Score=60.94 Aligned_cols=69 Identities=16% Similarity=0.118 Sum_probs=52.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcc-hh----hhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcCC
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR-NA----MESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE 172 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~-~~----~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~ 172 (306)
.+++|+|+|+++ +|.++++.|+++|++|++..++.. .. .+....+++++.+|..+ ..+.++|+||++++
T Consensus 4 ~~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~~~~~~~~~~~~~-----~~~~~~d~vv~~~g 77 (450)
T PRK14106 4 KGKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGELGIELVLGEYPE-----EFLEGVDLVVVSPG 77 (450)
T ss_pred CCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCEEEeCCcch-----hHhhcCCEEEECCC
Confidence 479999999955 999999999999999999988752 22 11222357788888776 34567999998743
|
|
| >PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.93 E-value=0.0015 Score=60.67 Aligned_cols=36 Identities=14% Similarity=0.158 Sum_probs=32.7
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchh
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA 136 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~ 136 (306)
++|.|+|+ |.+|..++..|+++|++|+++.|+++..
T Consensus 3 ~~V~VIG~-G~mG~~iA~~la~~G~~V~v~d~~~~~~ 38 (308)
T PRK06129 3 GSVAIIGA-GLIGRAWAIVFARAGHEVRLWDADPAAA 38 (308)
T ss_pred cEEEEECc-cHHHHHHHHHHHHCCCeeEEEeCCHHHH
Confidence 58999995 9999999999999999999999998653
|
|
| >PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=96.91 E-value=0.0023 Score=53.75 Aligned_cols=64 Identities=9% Similarity=-0.028 Sum_probs=47.3
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEc
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~ 170 (306)
+++|.+.|- |.+|+.+++.|++.|++|.+..|++++.++....+++. . ++..++.+++|+||.+
T Consensus 1 m~~Ig~IGl-G~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~g~~~--~-----~s~~e~~~~~dvvi~~ 64 (163)
T PF03446_consen 1 MMKIGFIGL-GNMGSAMARNLAKAGYEVTVYDRSPEKAEALAEAGAEV--A-----DSPAEAAEQADVVILC 64 (163)
T ss_dssp -BEEEEE---SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHHTTEEE--E-----SSHHHHHHHBSEEEE-
T ss_pred CCEEEEEch-HHHHHHHHHHHHhcCCeEEeeccchhhhhhhHHhhhhh--h-----hhhhhHhhcccceEee
Confidence 478999998 99999999999999999999999998866554433221 1 2445667778999987
|
1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A .... |
| >PRK08644 thiamine biosynthesis protein ThiF; Provisional | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.0072 Score=53.20 Aligned_cols=94 Identities=10% Similarity=0.141 Sum_probs=60.5
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEecCc---c---------------hh---hh---hcCC--Cceeee
Q 021854 96 EEARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDK---R---------------NA---ME---SFGT--YVESMA 148 (306)
Q Consensus 96 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~l~R~~---~---------------~~---~~---~~~~--~v~~v~ 148 (306)
.....+|+|.|+ |++|+++++.|+..|. +++++..+. + |+ .+ ...+ +++.+.
T Consensus 25 ~L~~~~V~ViG~-GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~dvG~~Ka~~a~~~l~~lnp~v~v~~~~ 103 (212)
T PRK08644 25 KLKKAKVGIAGA-GGLGSNIAVALARSGVGNLKLVDFDVVEPSNLNRQQYFISQIGMPKVEALKENLLEINPFVEIEAHN 103 (212)
T ss_pred HHhCCCEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCEeccccccccEeehhhCCChHHHHHHHHHHHHCCCCEEEEEe
Confidence 445789999998 8899999999999996 577776652 1 10 01 1122 333444
Q ss_pred ccCCCHHHHHHHhcCccEEEEcCCch-----hhhccccc-CCCEEEEecC
Q 021854 149 GDASNKKFLKTALRGVRSIICPSEGF-----ISNAGSLK-GVQHVILLSQ 192 (306)
Q Consensus 149 ~D~~d~~~l~~~~~~~d~vi~~~~g~-----~~~~a~~~-gvkr~V~iSS 192 (306)
..++ .+.+.+.++++|+||.+.... +.+.+.+. +++ +|+.+.
T Consensus 104 ~~i~-~~~~~~~~~~~DvVI~a~D~~~~r~~l~~~~~~~~~~p-~I~~~~ 151 (212)
T PRK08644 104 EKID-EDNIEELFKDCDIVVEAFDNAETKAMLVETVLEHPGKK-LVAASG 151 (212)
T ss_pred eecC-HHHHHHHHcCCCEEEECCCCHHHHHHHHHHHHHhCCCC-EEEeeh
Confidence 4444 356677889999999874433 34555555 654 665543
|
|
| >cd00704 MDH Malate dehydrogenase | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.0034 Score=58.80 Aligned_cols=64 Identities=16% Similarity=0.174 Sum_probs=46.1
Q ss_pred eEEEEcCCChHHHHHHHHHHHCCC-------eEEEEecCc--chhhhhcCCCceeeeccCCCH-----------HHHHHH
Q 021854 101 AVLVTDGDSDIGQMVILSLIVKRT-------RIKALVKDK--RNAMESFGTYVESMAGDASNK-----------KFLKTA 160 (306)
Q Consensus 101 ~ilVtGatG~iG~~l~~~L~~~g~-------~V~~l~R~~--~~~~~~~~~~v~~v~~D~~d~-----------~~l~~~ 160 (306)
+|.|+||+|.+|+.++..|+..+. +++++.++. ++ .+-...|+.|. ....+.
T Consensus 2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~--------~~g~~~Dl~d~~~~~~~~~~i~~~~~~~ 73 (323)
T cd00704 2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKA--------LEGVVMELQDCAFPLLKGVVITTDPEEA 73 (323)
T ss_pred EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCc--------cceeeeehhhhcccccCCcEEecChHHH
Confidence 799999999999999999987662 488887776 33 22223333332 345678
Q ss_pred hcCccEEEEcCC
Q 021854 161 LRGVRSIICPSE 172 (306)
Q Consensus 161 ~~~~d~vi~~~~ 172 (306)
++++|+||++++
T Consensus 74 ~~~aDiVVitAG 85 (323)
T cd00704 74 FKDVDVAILVGA 85 (323)
T ss_pred hCCCCEEEEeCC
Confidence 999999999833
|
Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PLN02383 aspartate semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=96.79 E-value=0.0074 Score=57.08 Aligned_cols=89 Identities=15% Similarity=0.151 Sum_probs=52.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCe---EEEEe--cCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcCC
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTR---IKALV--KDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE 172 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~---V~~l~--R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~ 172 (306)
+..+|.|.||||++|+++++.|.+++|. +..+. |+..+.... . +.+....++. . ..+.++|+||.+.+
T Consensus 6 ~~~kVaVvGAtG~vG~eLlrlL~~~~hP~~~l~~las~rsaGk~~~~-~-~~~~~v~~~~-~----~~~~~~D~vf~a~p 78 (344)
T PLN02383 6 NGPSVAIVGVTGAVGQEFLSVLTDRDFPYSSLKMLASARSAGKKVTF-E-GRDYTVEELT-E----DSFDGVDIALFSAG 78 (344)
T ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCCcceEEEEEccCCCCCeeee-c-CceeEEEeCC-H----HHHcCCCEEEECCC
Confidence 4579999999999999999999988773 33332 333332211 1 2233333332 2 24578999999854
Q ss_pred c-h---hhhcccccCCCEEEEecCcc
Q 021854 173 G-F---ISNAGSLKGVQHVILLSQLS 194 (306)
Q Consensus 173 g-~---~~~~a~~~gvkr~V~iSS~~ 194 (306)
. . +...+.+.|+ ++|=.|+..
T Consensus 79 ~~~s~~~~~~~~~~g~-~VIDlS~~f 103 (344)
T PLN02383 79 GSISKKFGPIAVDKGA-VVVDNSSAF 103 (344)
T ss_pred cHHHHHHHHHHHhCCC-EEEECCchh
Confidence 3 2 2222333443 466666654
|
|
| >PRK08762 molybdopterin biosynthesis protein MoeB; Validated | Back alignment and domain information |
|---|
Probab=96.76 E-value=0.0085 Score=57.33 Aligned_cols=94 Identities=13% Similarity=0.185 Sum_probs=62.5
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEecCc-------------------chhh---hh---cCCCce--ee
Q 021854 96 EEARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDK-------------------RNAM---ES---FGTYVE--SM 147 (306)
Q Consensus 96 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~l~R~~-------------------~~~~---~~---~~~~v~--~v 147 (306)
....++|+|.|+ |++|++++..|+..|. +++++.++. .|++ +. ..+.++ .+
T Consensus 132 ~l~~~~VlvvG~-GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~ 210 (376)
T PRK08762 132 RLLEARVLLIGA-GGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPDVQVEAV 210 (376)
T ss_pred HHhcCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCCCEEEEE
Confidence 346789999988 8899999999999997 777777762 1211 11 122333 33
Q ss_pred eccCCCHHHHHHHhcCccEEEEcCCch-----hhhcccccCCCEEEEecC
Q 021854 148 AGDASNKKFLKTALRGVRSIICPSEGF-----ISNAGSLKGVQHVILLSQ 192 (306)
Q Consensus 148 ~~D~~d~~~l~~~~~~~d~vi~~~~g~-----~~~~a~~~gvkr~V~iSS 192 (306)
...+. .+.+...++++|+||.++... +.++|.+.+++ +|+.+.
T Consensus 211 ~~~~~-~~~~~~~~~~~D~Vv~~~d~~~~r~~ln~~~~~~~ip-~i~~~~ 258 (376)
T PRK08762 211 QERVT-SDNVEALLQDVDVVVDGADNFPTRYLLNDACVKLGKP-LVYGAV 258 (376)
T ss_pred eccCC-hHHHHHHHhCCCEEEECCCCHHHHHHHHHHHHHcCCC-EEEEEe
Confidence 33333 456777889999999885543 44667777765 555543
|
|
| >TIGR01915 npdG NADPH-dependent F420 reductase | Back alignment and domain information |
|---|
Probab=96.76 E-value=0.0022 Score=56.56 Aligned_cols=68 Identities=18% Similarity=0.129 Sum_probs=48.6
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCC--------Cc--eeeeccCCCHHHHHHHhcCccEEEE
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGT--------YV--ESMAGDASNKKFLKTALRGVRSIIC 169 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~--------~v--~~v~~D~~d~~~l~~~~~~~d~vi~ 169 (306)
|+|.|+||+|.+|..+++.|++.|++|.+..|++++....... ++ .... .+ ..++++.+|+||.
T Consensus 1 MkI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~~~~~l~~~~~~~~~~~g~~~~~~~---~~---~~ea~~~aDvVil 74 (219)
T TIGR01915 1 MKIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEKAEEAAAKALEELGHGGSDIKVTG---AD---NAEAAKRADVVIL 74 (219)
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHHHHHHHHHHHHhhccccCCCceEEE---eC---hHHHHhcCCEEEE
Confidence 5799999999999999999999999999999998774332110 11 1111 12 2456778999998
Q ss_pred cCCc
Q 021854 170 PSEG 173 (306)
Q Consensus 170 ~~~g 173 (306)
+.+.
T Consensus 75 avp~ 78 (219)
T TIGR01915 75 AVPW 78 (219)
T ss_pred ECCH
Confidence 8443
|
This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase. |
| >TIGR02355 moeB molybdopterin synthase sulfurylase MoeB | Back alignment and domain information |
|---|
Probab=96.75 E-value=0.014 Score=52.44 Aligned_cols=94 Identities=9% Similarity=0.065 Sum_probs=61.3
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEecCcch-------------------h---hh---hcCCCce--ee
Q 021854 96 EEARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRN-------------------A---ME---SFGTYVE--SM 147 (306)
Q Consensus 96 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~l~R~~~~-------------------~---~~---~~~~~v~--~v 147 (306)
.....+|+|.|+ |++|++++..|+..|. +++++.++.-. + .+ ...+.++ .+
T Consensus 21 ~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~inp~v~i~~~ 99 (240)
T TIGR02355 21 ALKASRVLIVGL-GGLGCAASQYLAAAGVGNLTLLDFDTVSLSNLQRQVLHSDANIGQPKVESAKDALTQINPHIAINPI 99 (240)
T ss_pred HHhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCcccccCcccceeeeHhhCCCcHHHHHHHHHHHHCCCcEEEEE
Confidence 445689999999 8899999999999995 66665543311 0 00 1123333 33
Q ss_pred eccCCCHHHHHHHhcCccEEEEcCCch-----hhhcccccCCCEEEEecC
Q 021854 148 AGDASNKKFLKTALRGVRSIICPSEGF-----ISNAGSLKGVQHVILLSQ 192 (306)
Q Consensus 148 ~~D~~d~~~l~~~~~~~d~vi~~~~g~-----~~~~a~~~gvkr~V~iSS 192 (306)
...+ +.+.+.+.++++|+||.+.... +.+++.+.+++ +|+.+.
T Consensus 100 ~~~i-~~~~~~~~~~~~DlVvd~~D~~~~r~~ln~~~~~~~ip-~v~~~~ 147 (240)
T TIGR02355 100 NAKL-DDAELAALIAEHDIVVDCTDNVEVRNQLNRQCFAAKVP-LVSGAA 147 (240)
T ss_pred eccC-CHHHHHHHhhcCCEEEEcCCCHHHHHHHHHHHHHcCCC-EEEEEe
Confidence 3333 3456778899999999885433 45667778776 555444
|
This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899). |
| >PRK08328 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.75 E-value=0.014 Score=51.98 Aligned_cols=95 Identities=19% Similarity=0.288 Sum_probs=61.5
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEecCcch--------------------h---h---hhcCC--Ccee
Q 021854 96 EEARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRN--------------------A---M---ESFGT--YVES 146 (306)
Q Consensus 96 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~l~R~~~~--------------------~---~---~~~~~--~v~~ 146 (306)
.....+|+|.|+ |++|++++..|+..|. +++++..+.-. . . ....+ .++.
T Consensus 24 ~L~~~~VlIiG~-GGlGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~~k~~~a~~~l~~~np~v~v~~ 102 (231)
T PRK08328 24 KLKKAKVAVVGV-GGLGSPVAYYLAAAGVGRILLIDEQTPELSNLNRQILHWEEDLGKNPKPLSAKWKLERFNSDIKIET 102 (231)
T ss_pred HHhCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCccChhhhccccccChhhcCchHHHHHHHHHHHHhCCCCEEEE
Confidence 345689999999 8899999999999996 66666533211 0 0 01122 3334
Q ss_pred eeccCCCHHHHHHHhcCccEEEEcCCch-----hhhcccccCCCEEEEecCc
Q 021854 147 MAGDASNKKFLKTALRGVRSIICPSEGF-----ISNAGSLKGVQHVILLSQL 193 (306)
Q Consensus 147 v~~D~~d~~~l~~~~~~~d~vi~~~~g~-----~~~~a~~~gvkr~V~iSS~ 193 (306)
+...+ +.+.+.+.++++|+||.+.... +.++|.+.+++ +|+.+..
T Consensus 103 ~~~~~-~~~~~~~~l~~~D~Vid~~d~~~~r~~l~~~~~~~~ip-~i~g~~~ 152 (231)
T PRK08328 103 FVGRL-SEENIDEVLKGVDVIVDCLDNFETRYLLDDYAHKKGIP-LVHGAVE 152 (231)
T ss_pred EeccC-CHHHHHHHHhcCCEEEECCCCHHHHHHHHHHHHHcCCC-EEEEeec
Confidence 44444 4456777899999999884432 44567777765 5655443
|
|
| >cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA | Back alignment and domain information |
|---|
Probab=96.74 E-value=0.012 Score=52.40 Aligned_cols=94 Identities=13% Similarity=0.110 Sum_probs=60.9
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEecCcc-------------------h-------hhhhcC-CCceee
Q 021854 96 EEARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKR-------------------N-------AMESFG-TYVESM 147 (306)
Q Consensus 96 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~l~R~~~-------------------~-------~~~~~~-~~v~~v 147 (306)
.....+|+|.|+ |++|+++++.|+..|. +++++..+.- | +.+..+ .+++.+
T Consensus 18 ~L~~~~VlivG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i~~~ 96 (228)
T cd00757 18 KLKNARVLVVGA-GGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDVEIEAY 96 (228)
T ss_pred HHhCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCCEEEEe
Confidence 445789999998 8899999999999996 5555533221 0 011112 134444
Q ss_pred eccCCCHHHHHHHhcCccEEEEcCCch-----hhhcccccCCCEEEEecC
Q 021854 148 AGDASNKKFLKTALRGVRSIICPSEGF-----ISNAGSLKGVQHVILLSQ 192 (306)
Q Consensus 148 ~~D~~d~~~l~~~~~~~d~vi~~~~g~-----~~~~a~~~gvkr~V~iSS 192 (306)
..++ +.+.+.+.++++|+||.+.... +.+.+.+.+++ +|+.+.
T Consensus 97 ~~~i-~~~~~~~~~~~~DvVi~~~d~~~~r~~l~~~~~~~~ip-~i~~g~ 144 (228)
T cd00757 97 NERL-DAENAEELIAGYDLVLDCTDNFATRYLINDACVKLGKP-LVSGAV 144 (228)
T ss_pred ccee-CHHHHHHHHhCCCEEEEcCCCHHHHHHHHHHHHHcCCC-EEEEEe
Confidence 4455 3466778889999999884432 44566777764 555543
|
Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1). |
| >TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2 | Back alignment and domain information |
|---|
Probab=96.73 E-value=0.017 Score=50.41 Aligned_cols=76 Identities=11% Similarity=0.134 Sum_probs=53.0
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEecC---cchh------------------hh---hcCC--Cceeee
Q 021854 96 EEARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKD---KRNA------------------ME---SFGT--YVESMA 148 (306)
Q Consensus 96 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~l~R~---~~~~------------------~~---~~~~--~v~~v~ 148 (306)
....++|+|.|+ |++|+.++..|++.|. +++++.++ .+.+ .+ ...+ .++.+.
T Consensus 18 ~L~~~~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~~iG~~Ka~~~~~~l~~inp~~~i~~~~ 96 (200)
T TIGR02354 18 KLEQATVAICGL-GGLGSNVAINLARAGIGKLILVDFDVVEPSNLNRQQYKASQVGEPKTEALKENISEINPYTEIEAYD 96 (200)
T ss_pred HHhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCEEcccccccccCChhhCCCHHHHHHHHHHHHHCCCCEEEEee
Confidence 445789999999 8899999999999998 68888776 2210 00 0112 334444
Q ss_pred ccCCCHHHHHHHhcCccEEEEcCCc
Q 021854 149 GDASNKKFLKTALRGVRSIICPSEG 173 (306)
Q Consensus 149 ~D~~d~~~l~~~~~~~d~vi~~~~g 173 (306)
.+++ .+.+.+.++++|+||.+...
T Consensus 97 ~~i~-~~~~~~~~~~~DlVi~a~Dn 120 (200)
T TIGR02354 97 EKIT-EENIDKFFKDADIVCEAFDN 120 (200)
T ss_pred eeCC-HhHHHHHhcCCCEEEECCCC
Confidence 5554 46778889999999987443
|
Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter. |
| >PRK00048 dihydrodipicolinate reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.70 E-value=0.007 Score=54.83 Aligned_cols=64 Identities=16% Similarity=0.078 Sum_probs=43.3
Q ss_pred CeEEEEcCCChHHHHHHHHHHHC-CCeEEEEecCc-chhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEc
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVK-RTRIKALVKDK-RNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~-g~~V~~l~R~~-~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~ 170 (306)
++|+|+|++|.+|+.+++.+.+. +++++++++.. ++.... -..++...++++++++++|+||.+
T Consensus 2 mkV~IiG~~G~mG~~i~~~l~~~~~~elvav~d~~~~~~~~~-------~~~~i~~~~dl~~ll~~~DvVid~ 67 (257)
T PRK00048 2 IKVAVAGASGRMGRELIEAVEAAEDLELVAAVDRPGSPLVGQ-------GALGVAITDDLEAVLADADVLIDF 67 (257)
T ss_pred cEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCcccccc-------CCCCccccCCHHHhccCCCEEEEC
Confidence 68999999999999999988864 68888866543 332211 112333334556666678888865
|
|
| >COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only] | Back alignment and domain information |
|---|
Probab=96.70 E-value=0.008 Score=56.39 Aligned_cols=96 Identities=14% Similarity=0.130 Sum_probs=60.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCH---HHHHHHhc--CccEEEEcCC
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNK---KFLKTALR--GVRSIICPSE 172 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~---~~l~~~~~--~~d~vi~~~~ 172 (306)
.+.+|||+||+|++|...++-+...|+.+++.+.+.++.+......... ..|+.+. +.+++... ++|+|+...+
T Consensus 142 ~g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~~~~~lGAd~-vi~y~~~~~~~~v~~~t~g~gvDvv~D~vG 220 (326)
T COG0604 142 PGETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLELLKELGADH-VINYREEDFVEQVRELTGGKGVDVVLDTVG 220 (326)
T ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHhcCCCE-EEcCCcccHHHHHHHHcCCCCceEEEECCC
Confidence 3799999999999999999888788877777777666644221112222 2234442 34444553 5899998855
Q ss_pred ch-hhhc--ccccCCCEEEEecCccc
Q 021854 173 GF-ISNA--GSLKGVQHVILLSQLSV 195 (306)
Q Consensus 173 g~-~~~~--a~~~gvkr~V~iSS~~~ 195 (306)
+. +.+. +...+ .+++.+...+.
T Consensus 221 ~~~~~~~l~~l~~~-G~lv~ig~~~g 245 (326)
T COG0604 221 GDTFAASLAALAPG-GRLVSIGALSG 245 (326)
T ss_pred HHHHHHHHHHhccC-CEEEEEecCCC
Confidence 44 2222 22233 68888876653
|
|
| >TIGR00518 alaDH alanine dehydrogenase | Back alignment and domain information |
|---|
Probab=96.70 E-value=0.0068 Score=57.91 Aligned_cols=73 Identities=11% Similarity=0.027 Sum_probs=55.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcC
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS 171 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~ 171 (306)
...+|+|+|+ |.+|...++.|...|.+|+++.|+.++........-..+..+..+.+.+.+.+.++|+||.++
T Consensus 166 ~~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~g~~v~~~~~~~~~l~~~l~~aDvVI~a~ 238 (370)
T TIGR00518 166 EPGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQLDAEFGGRIHTRYSNAYEIEDAVKRADLLIGAV 238 (370)
T ss_pred CCceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhcCceeEeccCCHHHHHHHHccCCEEEEcc
Confidence 3567999988 999999999999999999999998876433211111123345667788899999999999873
|
The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP. |
| >PRK06719 precorrin-2 dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.70 E-value=0.032 Score=46.75 Aligned_cols=71 Identities=13% Similarity=0.126 Sum_probs=48.5
Q ss_pred CccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcch-hhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcCCc
Q 021854 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-AMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG 173 (306)
Q Consensus 95 ~~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~-~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~g 173 (306)
.+..+++|+|.|| |.+|...++.|++.|++|+++..+... ..+ . ..+++..-.+.. .-++++|.||.++..
T Consensus 9 l~l~~~~vlVvGG-G~va~rka~~Ll~~ga~V~VIsp~~~~~l~~-l-~~i~~~~~~~~~-----~dl~~a~lViaaT~d 80 (157)
T PRK06719 9 FNLHNKVVVIIGG-GKIAYRKASGLKDTGAFVTVVSPEICKEMKE-L-PYITWKQKTFSN-----DDIKDAHLIYAATNQ 80 (157)
T ss_pred EEcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCccCHHHHh-c-cCcEEEecccCh-----hcCCCceEEEECCCC
Confidence 4556899999999 999999999999999999998543322 111 2 234443333322 226788999887543
|
|
| >PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis [] | Back alignment and domain information |
|---|
Probab=96.70 E-value=0.006 Score=50.15 Aligned_cols=65 Identities=15% Similarity=0.222 Sum_probs=45.4
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCC--CeEEEEecCcchhhhh----------cCCCceeeeccCCCHHHHHHHhcCccEE
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRNAMES----------FGTYVESMAGDASNKKFLKTALRGVRSI 167 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~g--~~V~~l~R~~~~~~~~----------~~~~v~~v~~D~~d~~~l~~~~~~~d~v 167 (306)
++|.|+||+|.+|+.++..|...+ .+++++.++.+++... .+..+.+... + .+.++++|+|
T Consensus 1 ~KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~~---~----~~~~~~aDiv 73 (141)
T PF00056_consen 1 MKVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITSG---D----YEALKDADIV 73 (141)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEES---S----GGGGTTESEE
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhcccccccccc---c----ccccccccEE
Confidence 589999999999999999999987 4788888887652211 1112222222 2 2347889999
Q ss_pred EEcC
Q 021854 168 ICPS 171 (306)
Q Consensus 168 i~~~ 171 (306)
|.++
T Consensus 74 vita 77 (141)
T PF00056_consen 74 VITA 77 (141)
T ss_dssp EETT
T ss_pred EEec
Confidence 8863
|
L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C .... |
| >PRK08306 dipicolinate synthase subunit A; Reviewed | Back alignment and domain information |
|---|
Probab=96.69 E-value=0.0091 Score=55.27 Aligned_cols=71 Identities=10% Similarity=0.032 Sum_probs=53.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcCCch
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEGF 174 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~g~ 174 (306)
.+++++|.|+ |.+|+.+++.|...|++|+++.|++++.......+.+++ +.+.+.+.++++|+||++++..
T Consensus 151 ~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~~~~~~G~~~~-----~~~~l~~~l~~aDiVI~t~p~~ 221 (296)
T PRK08306 151 HGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAHLARITEMGLSPF-----HLSELAEEVGKIDIIFNTIPAL 221 (296)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCeee-----cHHHHHHHhCCCCEEEECCChh
Confidence 5799999998 889999999999999999999999765332222233322 2356677889999999985543
|
|
| >cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like | Back alignment and domain information |
|---|
Probab=96.68 E-value=0.015 Score=50.63 Aligned_cols=98 Identities=11% Similarity=0.210 Sum_probs=62.3
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEecCcch---------------------h------hhhcCC--Cce
Q 021854 96 EEARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRN---------------------A------MESFGT--YVE 145 (306)
Q Consensus 96 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~l~R~~~~---------------------~------~~~~~~--~v~ 145 (306)
.....+|+|.|+ |++|.++++.|+..|. +++++..+.-. + .....+ +++
T Consensus 16 ~L~~s~VlviG~-gglGsevak~L~~~GVg~i~lvD~d~ve~snl~rq~~~~~~~~~iG~~Ka~~~~~~L~~lNp~v~i~ 94 (198)
T cd01485 16 KLRSAKVLIIGA-GALGAEIAKNLVLAGIDSITIVDHRLVSTEDLGSNFFLDAEVSNSGMNRAAASYEFLQELNPNVKLS 94 (198)
T ss_pred HHhhCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEECCcCChhcCcccEecccchhhcCchHHHHHHHHHHHHCCCCEEE
Confidence 345689999999 5599999999999996 56666543210 0 001123 334
Q ss_pred eeeccCCC-HHHHHHHhcCccEEEEcCCch-----hhhcccccCCCEEEEecCccc
Q 021854 146 SMAGDASN-KKFLKTALRGVRSIICPSEGF-----ISNAGSLKGVQHVILLSQLSV 195 (306)
Q Consensus 146 ~v~~D~~d-~~~l~~~~~~~d~vi~~~~g~-----~~~~a~~~gvkr~V~iSS~~~ 195 (306)
.+..++.+ .+.....+..+|+||.+.... +.+.|.+.+++ +|..++.+.
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~dvVi~~~d~~~~~~~ln~~c~~~~ip-~i~~~~~G~ 149 (198)
T cd01485 95 IVEEDSLSNDSNIEEYLQKFTLVIATEENYERTAKVNDVCRKHHIP-FISCATYGL 149 (198)
T ss_pred EEecccccchhhHHHHHhCCCEEEECCCCHHHHHHHHHHHHHcCCC-EEEEEeecC
Confidence 44444432 445677789999999884332 44667788875 666655443
|
E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol |
| >cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins | Back alignment and domain information |
|---|
Probab=96.67 E-value=0.017 Score=47.19 Aligned_cols=90 Identities=22% Similarity=0.216 Sum_probs=57.3
Q ss_pred eEEEEcCCChHHHHHHHHHHHCCC-eEEEEecCcc-------------------h-------hhhhcC-CCceeeeccCC
Q 021854 101 AVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKR-------------------N-------AMESFG-TYVESMAGDAS 152 (306)
Q Consensus 101 ~ilVtGatG~iG~~l~~~L~~~g~-~V~~l~R~~~-------------------~-------~~~~~~-~~v~~v~~D~~ 152 (306)
+|+|.|+ |++|.++++.|+..|. +++++..+.- | ..+..+ ..++.+..++.
T Consensus 1 ~VliiG~-GglGs~ia~~L~~~Gv~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~~p~v~i~~~~~~~~ 79 (143)
T cd01483 1 RVLLVGL-GGLGSEIALNLARSGVGKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNELNPGVNVTAVPEGIS 79 (143)
T ss_pred CEEEECC-CHHHHHHHHHHHHCCCCEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHHHCCCcEEEEEeeecC
Confidence 5899998 9999999999999997 6777654421 0 011111 13334444444
Q ss_pred CHHHHHHHhcCccEEEEcCCch-----hhhcccccCCCEEEEecCc
Q 021854 153 NKKFLKTALRGVRSIICPSEGF-----ISNAGSLKGVQHVILLSQL 193 (306)
Q Consensus 153 d~~~l~~~~~~~d~vi~~~~g~-----~~~~a~~~gvkr~V~iSS~ 193 (306)
+ ......+.++|+||.+.... +.+.+++.+++ +|..++.
T Consensus 80 ~-~~~~~~~~~~diVi~~~d~~~~~~~l~~~~~~~~i~-~i~~~~~ 123 (143)
T cd01483 80 E-DNLDDFLDGVDLVIDAIDNIAVRRALNRACKELGIP-VIDAGGL 123 (143)
T ss_pred h-hhHHHHhcCCCEEEECCCCHHHHHHHHHHHHHcCCC-EEEEcCC
Confidence 3 33467788999999884433 45667777765 5555443
|
This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. |
| >TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type | Back alignment and domain information |
|---|
Probab=96.67 E-value=0.0044 Score=56.94 Aligned_cols=72 Identities=7% Similarity=-0.028 Sum_probs=51.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEecCcchhhhhcC---CCceeeeccCCCHHHHHHHhcCccEEEEcCC
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFG---TYVESMAGDASNKKFLKTALRGVRSIICPSE 172 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~l~R~~~~~~~~~~---~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~ 172 (306)
.+++++|.|| |+.|+.++..|+..|. +|.++.|+.+++++... ....+.. +...+.+...+.++|+||++++
T Consensus 124 ~~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~--~~~~~~~~~~~~~~DiVInaTp 199 (282)
T TIGR01809 124 AGFRGLVIGA-GGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVITR--LEGDSGGLAIEKAAEVLVSTVP 199 (282)
T ss_pred CCceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCccee--ccchhhhhhcccCCCEEEECCC
Confidence 4689999998 9999999999999996 79999999888654422 1111111 2222344556678999999843
|
This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway. |
| >PRK06718 precorrin-2 dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.66 E-value=0.028 Score=49.07 Aligned_cols=72 Identities=7% Similarity=0.136 Sum_probs=51.5
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcch-hhhhcCC-CceeeeccCCCHHHHHHHhcCccEEEEcCCc
Q 021854 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-AMESFGT-YVESMAGDASNKKFLKTALRGVRSIICPSEG 173 (306)
Q Consensus 96 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~-~~~~~~~-~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~g 173 (306)
+..+++|+|.|| |.+|...++.|++.|++|+++.++... +.+.... .+.+..-++. ...+.++|.||.+++.
T Consensus 7 ~l~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~~~~~l~~l~~~~~i~~~~~~~~-----~~~l~~adlViaaT~d 80 (202)
T PRK06718 7 DLSNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPELTENLVKLVEEGKIRWKQKEFE-----PSDIVDAFLVIAATND 80 (202)
T ss_pred EcCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCCCHHHHHHHhCCCEEEEecCCC-----hhhcCCceEEEEcCCC
Confidence 456899999999 999999999999999999999876543 2233322 3555443333 2346788999887543
|
|
| >PRK13940 glutamyl-tRNA reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.66 E-value=0.0063 Score=58.96 Aligned_cols=72 Identities=13% Similarity=0.141 Sum_probs=54.1
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcC
Q 021854 96 EEARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS 171 (306)
Q Consensus 96 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~ 171 (306)
...+++|+|.|+ |++|+.++..|...|. ++++..|+.+++...... +. .+.+...+.+...+..+|+||+++
T Consensus 178 ~l~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~-~~--~~~~~~~~~l~~~l~~aDiVI~aT 250 (414)
T PRK13940 178 NISSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQKITSA-FR--NASAHYLSELPQLIKKADIIIAAV 250 (414)
T ss_pred CccCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHH-hc--CCeEecHHHHHHHhccCCEEEECc
Confidence 345789999999 9999999999999995 799999998875543321 10 012233467788899999999983
|
|
| >cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase | Back alignment and domain information |
|---|
Probab=96.64 E-value=0.0082 Score=50.92 Aligned_cols=56 Identities=16% Similarity=0.193 Sum_probs=46.3
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcCC
Q 021854 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE 172 (306)
Q Consensus 96 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~ 172 (306)
...+++|+|.|+++.+|..+++.|.++|.+|.++.|+. +.+.+.++++|+||.+++
T Consensus 41 ~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~---------------------~~l~~~l~~aDiVIsat~ 96 (168)
T cd01080 41 DLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKT---------------------KNLKEHTKQADIVIVAVG 96 (168)
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCc---------------------hhHHHHHhhCCEEEEcCC
Confidence 45689999999966679999999999999999888763 355678889999998833
|
NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a |
| >COG2085 Predicted dinucleotide-binding enzymes [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.63 E-value=0.0035 Score=54.69 Aligned_cols=68 Identities=10% Similarity=0.080 Sum_probs=45.1
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcCC
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE 172 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~ 172 (306)
|++.|. ++|.||..++++|.+.||+|++.+|+.++..+......... -...+...+.+.+|+||.+.+
T Consensus 2 ~~~~i~-GtGniG~alA~~~a~ag~eV~igs~r~~~~~~a~a~~l~~~----i~~~~~~dA~~~aDVVvLAVP 69 (211)
T COG2085 2 MIIAII-GTGNIGSALALRLAKAGHEVIIGSSRGPKALAAAAAALGPL----ITGGSNEDAAALADVVVLAVP 69 (211)
T ss_pred cEEEEe-ccChHHHHHHHHHHhCCCeEEEecCCChhHHHHHHHhhccc----cccCChHHHHhcCCEEEEecc
Confidence 455555 55999999999999999999999777765322211111111 112334567889999999844
|
|
| >TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent | Back alignment and domain information |
|---|
Probab=96.60 E-value=0.0061 Score=57.16 Aligned_cols=65 Identities=17% Similarity=0.105 Sum_probs=45.3
Q ss_pred eEEEEcCCChHHHHHHHHHHHCCC-------eEEEEecCcchhhhhcCCCceeeeccCCCHH-----------HHHHHhc
Q 021854 101 AVLVTDGDSDIGQMVILSLIVKRT-------RIKALVKDKRNAMESFGTYVESMAGDASNKK-----------FLKTALR 162 (306)
Q Consensus 101 ~ilVtGatG~iG~~l~~~L~~~g~-------~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~-----------~l~~~~~ 162 (306)
+|+|+||+|.+|+.++..|+..+. +++++.+++... ..+-...|+.|.. ...+.++
T Consensus 1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~------~a~g~~~Dl~d~~~~~~~~~~~~~~~~~~~~ 74 (324)
T TIGR01758 1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMK------VLEGVVMELMDCAFPLLDGVVPTHDPAVAFT 74 (324)
T ss_pred CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCccc------ccceeEeehhcccchhcCceeccCChHHHhC
Confidence 589999999999999999987553 588888755321 1122233443332 3457899
Q ss_pred CccEEEEcC
Q 021854 163 GVRSIICPS 171 (306)
Q Consensus 163 ~~d~vi~~~ 171 (306)
++|+||+++
T Consensus 75 ~aDiVVitA 83 (324)
T TIGR01758 75 DVDVAILVG 83 (324)
T ss_pred CCCEEEEcC
Confidence 999999973
|
This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography |
| >PRK05597 molybdopterin biosynthesis protein MoeB; Validated | Back alignment and domain information |
|---|
Probab=96.60 E-value=0.015 Score=55.22 Aligned_cols=92 Identities=20% Similarity=0.163 Sum_probs=60.6
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEecCcch-------------------h---hh---hcCC--Cceee
Q 021854 96 EEARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRN-------------------A---ME---SFGT--YVESM 147 (306)
Q Consensus 96 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~l~R~~~~-------------------~---~~---~~~~--~v~~v 147 (306)
.....+|+|.|+ |++|+++++.|+..|. +++++.++.-. + .+ ...+ +++.+
T Consensus 25 ~L~~~~VlivG~-GGlGs~~a~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~v~~~ 103 (355)
T PRK05597 25 SLFDAKVAVIGA-GGLGSPALLYLAGAGVGHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLALNPDVKVTVS 103 (355)
T ss_pred HHhCCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHHCCCcEEEEE
Confidence 445789999999 8899999999999996 66666554311 0 00 1123 34444
Q ss_pred eccCCCHHHHHHHhcCccEEEEcCCch-----hhhcccccCCCEEEEe
Q 021854 148 AGDASNKKFLKTALRGVRSIICPSEGF-----ISNAGSLKGVQHVILL 190 (306)
Q Consensus 148 ~~D~~d~~~l~~~~~~~d~vi~~~~g~-----~~~~a~~~gvkr~V~i 190 (306)
...++ .+...+.++++|+||.++..+ +.++|.+.+++ +|+.
T Consensus 104 ~~~i~-~~~~~~~~~~~DvVvd~~d~~~~r~~~n~~c~~~~ip-~v~~ 149 (355)
T PRK05597 104 VRRLT-WSNALDELRDADVILDGSDNFDTRHLASWAAARLGIP-HVWA 149 (355)
T ss_pred EeecC-HHHHHHHHhCCCEEEECCCCHHHHHHHHHHHHHcCCC-EEEE
Confidence 44554 456677889999999985543 44567777765 4443
|
|
| >PRK15116 sulfur acceptor protein CsdL; Provisional | Back alignment and domain information |
|---|
Probab=96.50 E-value=0.062 Score=49.03 Aligned_cols=98 Identities=10% Similarity=0.017 Sum_probs=61.2
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCC-CeEEEEecCcch----------------------hhh---hcCCCceeeec
Q 021854 96 EEARDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRN----------------------AME---SFGTYVESMAG 149 (306)
Q Consensus 96 ~~~~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~l~R~~~~----------------------~~~---~~~~~v~~v~~ 149 (306)
.....+|+|.|+ |++|+++++.|+..| -+++++..+.-. +.+ ...+.+++...
T Consensus 27 kL~~s~VlVvG~-GGVGs~vae~Lar~GVg~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~INP~~~V~~i 105 (268)
T PRK15116 27 LFADAHICVVGI-GGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRVTVV 105 (268)
T ss_pred HhcCCCEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHhHCCCcEEEEE
Confidence 345789999999 889999999999999 477777644211 001 11223333222
Q ss_pred -cCCCHHHHHHHhc-CccEEEEcCCch-----hhhcccccCCCEEEEecCccc
Q 021854 150 -DASNKKFLKTALR-GVRSIICPSEGF-----ISNAGSLKGVQHVILLSQLSV 195 (306)
Q Consensus 150 -D~~d~~~l~~~~~-~~d~vi~~~~g~-----~~~~a~~~gvkr~V~iSS~~~ 195 (306)
+..+.+.+...+. ++|+||.+.... +.+.|.+.+++ ||.+...+.
T Consensus 106 ~~~i~~e~~~~ll~~~~D~VIdaiD~~~~k~~L~~~c~~~~ip-~I~~gGag~ 157 (268)
T PRK15116 106 DDFITPDNVAEYMSAGFSYVIDAIDSVRPKAALIAYCRRNKIP-LVTTGGAGG 157 (268)
T ss_pred ecccChhhHHHHhcCCCCEEEEcCCCHHHHHHHHHHHHHcCCC-EEEECCccc
Confidence 3334566667764 699999884432 55667777765 554444433
|
|
| >cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase | Back alignment and domain information |
|---|
Probab=96.49 E-value=0.016 Score=54.12 Aligned_cols=95 Identities=11% Similarity=0.005 Sum_probs=58.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcC-CCceeeeccCC---CH-HHHHHHh-cCccEEEEcC
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG-TYVESMAGDAS---NK-KFLKTAL-RGVRSIICPS 171 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~-~~v~~v~~D~~---d~-~~l~~~~-~~~d~vi~~~ 171 (306)
.+.+|+|+||+|.+|..+++.+...|.+|++++++.++...... -++..+ .|.. +. +.+.+.. .++|++|.+.
T Consensus 151 ~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~lGa~~v-i~~~~~~~~~~~i~~~~~~gvd~v~d~~ 229 (338)
T cd08295 151 KGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNKLGFDDA-FNYKEEPDLDAALKRYFPNGIDIYFDNV 229 (338)
T ss_pred CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCcee-EEcCCcccHHHHHHHhCCCCcEEEEECC
Confidence 57899999999999999998888899999999988876443211 122222 2222 21 2233322 4789999875
Q ss_pred Cchhh-hcccc-cCCCEEEEecCc
Q 021854 172 EGFIS-NAGSL-KGVQHVILLSQL 193 (306)
Q Consensus 172 ~g~~~-~~a~~-~gvkr~V~iSS~ 193 (306)
++... +.... ..-.++|.++..
T Consensus 230 g~~~~~~~~~~l~~~G~iv~~G~~ 253 (338)
T cd08295 230 GGKMLDAVLLNMNLHGRIAACGMI 253 (338)
T ss_pred CHHHHHHHHHHhccCcEEEEeccc
Confidence 54322 22111 233578877654
|
This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in |
| >PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional | Back alignment and domain information |
|---|
Probab=96.48 E-value=0.0086 Score=61.06 Aligned_cols=73 Identities=18% Similarity=0.201 Sum_probs=62.0
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHH-hcCccEEEEcCC
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA-LRGVRSIICPSE 172 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~-~~~~d~vi~~~~ 172 (306)
.++|+|.|. |.+|+.+++.|.++|++++++..++++.+.....+.+++.+|.+|++.++++ ++.+|.+|.+..
T Consensus 400 ~~~vII~G~-Gr~G~~va~~L~~~g~~vvvID~d~~~v~~~~~~g~~v~~GDat~~~~L~~agi~~A~~vvv~~~ 473 (621)
T PRK03562 400 QPRVIIAGF-GRFGQIVGRLLLSSGVKMTVLDHDPDHIETLRKFGMKVFYGDATRMDLLESAGAAKAEVLINAID 473 (621)
T ss_pred cCcEEEEec-ChHHHHHHHHHHhCCCCEEEEECCHHHHHHHHhcCCeEEEEeCCCHHHHHhcCCCcCCEEEEEeC
Confidence 578999999 9999999999999999999999999876544445688999999999988764 567899998744
|
|
| >PRK05690 molybdopterin biosynthesis protein MoeB; Provisional | Back alignment and domain information |
|---|
Probab=96.47 E-value=0.024 Score=51.04 Aligned_cols=93 Identities=11% Similarity=0.074 Sum_probs=60.4
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEecCcch-------------------h---hh---hcCC--Cceee
Q 021854 96 EEARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRN-------------------A---ME---SFGT--YVESM 147 (306)
Q Consensus 96 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~l~R~~~~-------------------~---~~---~~~~--~v~~v 147 (306)
.....+|+|.|+ |++|+++++.|+..|. +++++..+.-. + .+ ...+ +++.+
T Consensus 29 ~L~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~Ka~~a~~~l~~lnp~v~i~~~ 107 (245)
T PRK05690 29 KLKAARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFDTVSLSNLQRQVLHDDATIGQPKVESARAALARINPHIAIETI 107 (245)
T ss_pred HhcCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEECcchhhhhhcCChhhCCChHHHHHHHHHHHHCCCCEEEEE
Confidence 445789999999 9999999999999996 66666443311 0 00 1122 33444
Q ss_pred eccCCCHHHHHHHhcCccEEEEcCCch-----hhhcccccCCCEEEEec
Q 021854 148 AGDASNKKFLKTALRGVRSIICPSEGF-----ISNAGSLKGVQHVILLS 191 (306)
Q Consensus 148 ~~D~~d~~~l~~~~~~~d~vi~~~~g~-----~~~~a~~~gvkr~V~iS 191 (306)
...+. .+.+.+.++++|+||.+.... +.+++.+.+++ +|+.+
T Consensus 108 ~~~i~-~~~~~~~~~~~DiVi~~~D~~~~r~~ln~~~~~~~ip-~v~~~ 154 (245)
T PRK05690 108 NARLD-DDELAALIAGHDLVLDCTDNVATRNQLNRACFAAKKP-LVSGA 154 (245)
T ss_pred eccCC-HHHHHHHHhcCCEEEecCCCHHHHHHHHHHHHHhCCE-EEEee
Confidence 44443 456777899999999885433 44566777754 55543
|
|
| >PRK12549 shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.45 E-value=0.0037 Score=57.49 Aligned_cols=68 Identities=15% Similarity=0.163 Sum_probs=49.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEecCcchhhhhc---CC---CceeeeccCCCHHHHHHHhcCccEEEEc
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESF---GT---YVESMAGDASNKKFLKTALRGVRSIICP 170 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~l~R~~~~~~~~~---~~---~v~~v~~D~~d~~~l~~~~~~~d~vi~~ 170 (306)
.+++|+|.|| |+.|++++..|+..|. +|+++.|+.++++... .. .+.+. .+ +++.+.+.++|+||++
T Consensus 126 ~~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~~~~~~~--~~---~~~~~~~~~aDiVIna 199 (284)
T PRK12549 126 SLERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARFPAARAT--AG---SDLAAALAAADGLVHA 199 (284)
T ss_pred cCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhCCCeEEE--ec---cchHhhhCCCCEEEEC
Confidence 4689999999 8899999999999997 7999999988754332 11 12221 11 2344567889999998
Q ss_pred C
Q 021854 171 S 171 (306)
Q Consensus 171 ~ 171 (306)
+
T Consensus 200 T 200 (284)
T PRK12549 200 T 200 (284)
T ss_pred C
Confidence 3
|
|
| >PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ] | Back alignment and domain information |
|---|
Probab=96.44 E-value=0.01 Score=47.56 Aligned_cols=86 Identities=13% Similarity=0.090 Sum_probs=50.2
Q ss_pred CeEEEEcCCChHHHHHHHHHHH-CCCeEEEEecCcc-hhh-hhcC--CCceeeeccCCCHHHHHHHhcCccEEEEcC-Cc
Q 021854 100 DAVLVTDGDSDIGQMVILSLIV-KRTRIKALVKDKR-NAM-ESFG--TYVESMAGDASNKKFLKTALRGVRSIICPS-EG 173 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~-~g~~V~~l~R~~~-~~~-~~~~--~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~-~g 173 (306)
++|+|.|++|.+|+.+++.+.+ .++++.+...... ... ...+ .+.. ...+.-.++++++++.+|++|..+ +.
T Consensus 1 mrV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~--~~~~~v~~~l~~~~~~~DVvIDfT~p~ 78 (124)
T PF01113_consen 1 MRVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIG--PLGVPVTDDLEELLEEADVVIDFTNPD 78 (124)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSS--T-SSBEBS-HHHHTTH-SEEEEES-HH
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcC--CcccccchhHHHhcccCCEEEEcCChH
Confidence 4899999999999999999999 6788777655443 211 0000 0000 111111256677787899999763 32
Q ss_pred h---hhhcccccCCCEE
Q 021854 174 F---ISNAGSLKGVQHV 187 (306)
Q Consensus 174 ~---~~~~a~~~gvkr~ 187 (306)
. ..+.+.++++.-+
T Consensus 79 ~~~~~~~~~~~~g~~~V 95 (124)
T PF01113_consen 79 AVYDNLEYALKHGVPLV 95 (124)
T ss_dssp HHHHHHHHHHHHT-EEE
T ss_pred HhHHHHHHHHhCCCCEE
Confidence 2 4455666766433
|
In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A .... |
| >TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase | Back alignment and domain information |
|---|
Probab=96.43 E-value=0.016 Score=53.63 Aligned_cols=96 Identities=15% Similarity=0.097 Sum_probs=59.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCC---HHH-HHHHh-cCccEEEEcCC
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASN---KKF-LKTAL-RGVRSIICPSE 172 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d---~~~-l~~~~-~~~d~vi~~~~ 172 (306)
.+.+|+|+||+|.+|..+++.+...|.+|++++++.++......-++..+ .|..+ ... +.... +++|+++.+.+
T Consensus 138 ~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~~~lGa~~v-i~~~~~~~~~~~~~~~~~~gvdvv~d~~G 216 (325)
T TIGR02825 138 GGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYLKKLGFDVA-FNYKTVKSLEETLKKASPDGYDCYFDNVG 216 (325)
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEE-EeccccccHHHHHHHhCCCCeEEEEECCC
Confidence 46899999999999999998877889999999988776432222223222 23322 222 22222 36899998755
Q ss_pred chhhh-ccc-ccCCCEEEEecCcc
Q 021854 173 GFISN-AGS-LKGVQHVILLSQLS 194 (306)
Q Consensus 173 g~~~~-~a~-~~gvkr~V~iSS~~ 194 (306)
+...+ +.. -..-.++|.++...
T Consensus 217 ~~~~~~~~~~l~~~G~iv~~G~~~ 240 (325)
T TIGR02825 217 GEFSNTVIGQMKKFGRIAICGAIS 240 (325)
T ss_pred HHHHHHHHHHhCcCcEEEEecchh
Confidence 43222 211 12345788877543
|
Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase. |
| >PRK08223 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=96.42 E-value=0.021 Score=52.45 Aligned_cols=94 Identities=14% Similarity=0.147 Sum_probs=61.7
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEecCcch----------------------hhh---hcCC--Cceee
Q 021854 96 EEARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRN----------------------AME---SFGT--YVESM 147 (306)
Q Consensus 96 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~l~R~~~~----------------------~~~---~~~~--~v~~v 147 (306)
.....+|+|.|+ |++|+.++..|+..|. ++.++..+.=. +.+ ...+ +++.+
T Consensus 24 kL~~s~VlIvG~-GGLGs~va~~LA~aGVG~i~lvD~D~Ve~SNLnRQ~l~~~~diG~~Kve~a~~~l~~iNP~v~V~~~ 102 (287)
T PRK08223 24 RLRNSRVAIAGL-GGVGGIHLLTLARLGIGKFTIADFDVFELRNFNRQAGAMMSTLGRPKAEVLAEMVRDINPELEIRAF 102 (287)
T ss_pred HHhcCCEEEECC-CHHHHHHHHHHHHhCCCeEEEEeCCCcchhccccccCcChhHCCCcHHHHHHHHHHHHCCCCEEEEE
Confidence 445789999999 8899999999999996 66666543311 000 1123 34444
Q ss_pred eccCCCHHHHHHHhcCccEEEEcCCch-------hhhcccccCCCEEEEecC
Q 021854 148 AGDASNKKFLKTALRGVRSIICPSEGF-------ISNAGSLKGVQHVILLSQ 192 (306)
Q Consensus 148 ~~D~~d~~~l~~~~~~~d~vi~~~~g~-------~~~~a~~~gvkr~V~iSS 192 (306)
...++ .+.+.++++++|+||.+...+ +.++|.+.+++ +|+.+.
T Consensus 103 ~~~l~-~~n~~~ll~~~DlVvD~~D~~~~~~r~~ln~~c~~~~iP-~V~~~~ 152 (287)
T PRK08223 103 PEGIG-KENADAFLDGVDVYVDGLDFFEFDARRLVFAACQQRGIP-ALTAAP 152 (287)
T ss_pred ecccC-ccCHHHHHhCCCEEEECCCCCcHHHHHHHHHHHHHcCCC-EEEEec
Confidence 44444 456778899999999774431 44677888875 555443
|
|
| >PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related | Back alignment and domain information |
|---|
Probab=96.40 E-value=0.01 Score=50.65 Aligned_cols=66 Identities=15% Similarity=0.009 Sum_probs=47.6
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEc
Q 021854 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (306)
Q Consensus 96 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~ 170 (306)
...+++|.|.|. |.||+++++.|...|++|++..|............+ ...+++++++.+|+|++.
T Consensus 33 ~l~g~tvgIiG~-G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~~~~~--------~~~~l~ell~~aDiv~~~ 98 (178)
T PF02826_consen 33 ELRGKTVGIIGY-GRIGRAVARRLKAFGMRVIGYDRSPKPEEGADEFGV--------EYVSLDELLAQADIVSLH 98 (178)
T ss_dssp -STTSEEEEEST-SHHHHHHHHHHHHTT-EEEEEESSCHHHHHHHHTTE--------EESSHHHHHHH-SEEEE-
T ss_pred ccCCCEEEEEEE-cCCcCeEeeeeecCCceeEEecccCChhhhcccccc--------eeeehhhhcchhhhhhhh
Confidence 446899999988 999999999999999999999999876431111111 123566788899999976
|
All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A .... |
| >cd01487 E1_ThiF_like E1_ThiF_like | Back alignment and domain information |
|---|
Probab=96.38 E-value=0.028 Score=47.88 Aligned_cols=87 Identities=9% Similarity=0.087 Sum_probs=55.9
Q ss_pred eEEEEcCCChHHHHHHHHHHHCCC-eEEEEecCc---c---------------hh---h---hhcCC--CceeeeccCCC
Q 021854 101 AVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDK---R---------------NA---M---ESFGT--YVESMAGDASN 153 (306)
Q Consensus 101 ~ilVtGatG~iG~~l~~~L~~~g~-~V~~l~R~~---~---------------~~---~---~~~~~--~v~~v~~D~~d 153 (306)
+|+|.|+ |++|+++++.|+..|. +++++.++. + |. . ....+ +++.+...+.
T Consensus 1 ~VlViG~-GglGs~ia~~La~~Gvg~i~lvD~D~v~~sNl~Rq~~~~~~vg~~Ka~~~~~~l~~lnp~v~i~~~~~~~~- 78 (174)
T cd01487 1 KVGIAGA-GGLGSNIAVLLARSGVGNLKLVDFDVVEPSNLNRQQYFLSQIGEPKVEALKENLREINPFVKIEAINIKID- 78 (174)
T ss_pred CEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCEEcCcchhcccccHhhCCChHHHHHHHHHHHHCCCCEEEEEEeecC-
Confidence 5899998 8899999999999997 588887665 1 10 0 01122 3334444443
Q ss_pred HHHHHHHhcCccEEEEcCCch-----hhhccccc-CCCEEEEe
Q 021854 154 KKFLKTALRGVRSIICPSEGF-----ISNAGSLK-GVQHVILL 190 (306)
Q Consensus 154 ~~~l~~~~~~~d~vi~~~~g~-----~~~~a~~~-gvkr~V~i 190 (306)
.+.+.+.++++|+||.+.... +.+.+.+. +++ +|+.
T Consensus 79 ~~~~~~~l~~~DlVi~~~d~~~~r~~i~~~~~~~~~ip-~i~~ 120 (174)
T cd01487 79 ENNLEGLFGDCDIVVEAFDNAETKAMLAESLLGNKNKP-VVCA 120 (174)
T ss_pred hhhHHHHhcCCCEEEECCCCHHHHHHHHHHHHHHCCCC-EEEE
Confidence 356778899999999884433 33444444 654 5444
|
Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown. |
| >cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase | Back alignment and domain information |
|---|
Probab=96.38 E-value=0.017 Score=50.36 Aligned_cols=80 Identities=6% Similarity=-0.025 Sum_probs=51.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCC-CceeeeccCCCHHHHHHHh-cCccEEEEcCCchh
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGT-YVESMAGDASNKKFLKTAL-RGVRSIICPSEGFI 175 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~-~v~~v~~D~~d~~~l~~~~-~~~d~vi~~~~g~~ 175 (306)
.+++|+|+|. |.+|+.+++.|.+.|++|++..++.++....... +.+.+ |. + +++ ..+|+++.++.+..
T Consensus 27 ~gk~v~I~G~-G~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~~g~~~v--~~---~---~l~~~~~Dv~vp~A~~~~ 97 (200)
T cd01075 27 EGKTVAVQGL-GKVGYKLAEHLLEEGAKLIVADINEEAVARAAELFGATVV--AP---E---EIYSVDADVFAPCALGGV 97 (200)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcCCEEE--cc---h---hhccccCCEEEecccccc
Confidence 4799999999 7999999999999999999888877654332111 22222 22 1 223 26999996633332
Q ss_pred h--hcccccCCCE
Q 021854 176 S--NAGSLKGVQH 186 (306)
Q Consensus 176 ~--~~a~~~gvkr 186 (306)
+ +.+++.+.+.
T Consensus 98 I~~~~~~~l~~~~ 110 (200)
T cd01075 98 INDDTIPQLKAKA 110 (200)
T ss_pred cCHHHHHHcCCCE
Confidence 2 2334455553
|
Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc |
| >PRK08057 cobalt-precorrin-6x reductase; Reviewed | Back alignment and domain information |
|---|
Probab=96.38 E-value=0.03 Score=50.53 Aligned_cols=90 Identities=16% Similarity=0.130 Sum_probs=69.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhc--CccEEEEcCCch-
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--GVRSIICPSEGF- 174 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~--~~d~vi~~~~g~- 174 (306)
|+++|+|.|||+ =|+.+++.|.+.|+.|++.+-...... ....+.+..+-+.|.+.+...++ ++++||-++-.|
T Consensus 1 ~~~~IlvlgGT~-egr~la~~L~~~g~~v~~Svat~~g~~--~~~~~~v~~G~l~~~~~l~~~l~~~~i~~VIDATHPfA 77 (248)
T PRK08057 1 MMPRILLLGGTS-EARALARALAAAGVDIVLSLAGRTGGP--ADLPGPVRVGGFGGAEGLAAYLREEGIDLVIDATHPYA 77 (248)
T ss_pred CCceEEEEechH-HHHHHHHHHHhCCCeEEEEEccCCCCc--ccCCceEEECCCCCHHHHHHHHHHCCCCEEEECCCccH
Confidence 468899999987 699999999999999888776664431 12367788888889999999986 679999875544
Q ss_pred ------hhhcccccCCCEEEEe
Q 021854 175 ------ISNAGSLKGVQHVILL 190 (306)
Q Consensus 175 ------~~~~a~~~gvkr~V~i 190 (306)
..++|++.+++.+=|.
T Consensus 78 ~~is~~a~~ac~~~~ipyiR~e 99 (248)
T PRK08057 78 AQISANAAAACRALGIPYLRLE 99 (248)
T ss_pred HHHHHHHHHHHHHhCCcEEEEe
Confidence 5567788888766654
|
|
| >PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3 | Back alignment and domain information |
|---|
Probab=96.31 E-value=0.018 Score=48.47 Aligned_cols=69 Identities=20% Similarity=0.162 Sum_probs=48.0
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcCCc
Q 021854 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG 173 (306)
Q Consensus 96 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~g 173 (306)
...+|+++|+|- |.+|+.+++.|...|.+|++...++-++.+..-+++++. .+++++...|++|.+++.
T Consensus 20 ~l~Gk~vvV~GY-G~vG~g~A~~lr~~Ga~V~V~e~DPi~alqA~~dGf~v~--------~~~~a~~~adi~vtaTG~ 88 (162)
T PF00670_consen 20 MLAGKRVVVIGY-GKVGKGIARALRGLGARVTVTEIDPIRALQAAMDGFEVM--------TLEEALRDADIFVTATGN 88 (162)
T ss_dssp --TTSEEEEE---SHHHHHHHHHHHHTT-EEEEE-SSHHHHHHHHHTT-EEE---------HHHHTTT-SEEEE-SSS
T ss_pred eeCCCEEEEeCC-CcccHHHHHHHhhCCCEEEEEECChHHHHHhhhcCcEec--------CHHHHHhhCCEEEECCCC
Confidence 345899999999 999999999999999999999999977544433455433 356788999999988654
|
3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C .... |
| >cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=96.30 E-value=0.031 Score=51.37 Aligned_cols=95 Identities=17% Similarity=0.124 Sum_probs=58.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCC-HHHHHHHhcCccEEEEcCCchhh
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASN-KKFLKTALRGVRSIICPSEGFIS 176 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d-~~~l~~~~~~~d~vi~~~~g~~~ 176 (306)
.+.+++|+||+|.+|..+++.+...|.+|++++|+.++...........+ .+..+ .+.+.+ +.++|.++++.++...
T Consensus 162 ~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~d~v~~~~g~~~~ 239 (332)
T cd08259 162 KGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKILKELGADYV-IDGSKFSEDVKK-LGGADVVIELVGSPTI 239 (332)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHcCCcEE-EecHHHHHHHHh-ccCCCEEEECCChHHH
Confidence 46799999999999999999999999999999988765432211112211 12222 122222 2378999987543322
Q ss_pred h-cccc-cCCCEEEEecCcc
Q 021854 177 N-AGSL-KGVQHVILLSQLS 194 (306)
Q Consensus 177 ~-~a~~-~gvkr~V~iSS~~ 194 (306)
. +.+. ..-.++|.++...
T Consensus 240 ~~~~~~~~~~g~~v~~g~~~ 259 (332)
T cd08259 240 EESLRSLNKGGRLVLIGNVT 259 (332)
T ss_pred HHHHHHhhcCCEEEEEcCCC
Confidence 1 1111 2335788777643
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. |
| >PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain | Back alignment and domain information |
|---|
Probab=96.29 E-value=0.011 Score=44.70 Aligned_cols=65 Identities=12% Similarity=0.140 Sum_probs=44.8
Q ss_pred eEEEEcCCChHHHHHHHHHHHCC---CeEEEE-ecCcchhhhhcCC-CceeeeccCCCHHHHHHHhcCccEEEEcCC
Q 021854 101 AVLVTDGDSDIGQMVILSLIVKR---TRIKAL-VKDKRNAMESFGT-YVESMAGDASNKKFLKTALRGVRSIICPSE 172 (306)
Q Consensus 101 ~ilVtGatG~iG~~l~~~L~~~g---~~V~~l-~R~~~~~~~~~~~-~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~ 172 (306)
+|.|.|+ |.+|.++++.|++.| ++|... .|++++..+.... .+.+... +..++++..|+||.+..
T Consensus 1 kI~iIG~-G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~~~~~~~~------~~~~~~~~advvilav~ 70 (96)
T PF03807_consen 1 KIGIIGA-GNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEYGVQATAD------DNEEAAQEADVVILAVK 70 (96)
T ss_dssp EEEEEST-SHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHCTTEEESE------EHHHHHHHTSEEEE-S-
T ss_pred CEEEECC-CHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhhccccccC------ChHHhhccCCEEEEEEC
Confidence 5788866 999999999999999 999966 8999876543221 1222221 23455668999998844
|
It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D .... |
| >cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2 | Back alignment and domain information |
|---|
Probab=96.24 E-value=0.031 Score=52.12 Aligned_cols=89 Identities=12% Similarity=0.160 Sum_probs=56.0
Q ss_pred eEEEEcCCChHHHHHHHHHHHCCC-eEEEEecCcch--------------------------hhhhcC-CCceeeeccCC
Q 021854 101 AVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRN--------------------------AMESFG-TYVESMAGDAS 152 (306)
Q Consensus 101 ~ilVtGatG~iG~~l~~~L~~~g~-~V~~l~R~~~~--------------------------~~~~~~-~~v~~v~~D~~ 152 (306)
+|+|.|+ |++|.++++.|+..|. ++.++..+.-. +.+..+ ..++.+..++.
T Consensus 1 kVlIVGa-GGlG~EiaKnLal~Gvg~ItIvD~D~Ve~sNLnRQflf~~~dVGk~Kaevaa~~l~~lNp~v~V~~~~~~i~ 79 (312)
T cd01489 1 KVLVVGA-GGIGCELLKNLVLTGFGEIHIIDLDTIDLSNLNRQFLFRKKHVGKSKAQVAKEAVLSFNPNVKIVAYHANIK 79 (312)
T ss_pred CEEEECC-CHHHHHHHHHHHHhcCCeEEEEcCCCcchhhcCcCccCChhHcCcHHHHHHHHHHHHHCCCCeEEEEeccCC
Confidence 5899998 8899999999999996 56665433311 011112 24555566776
Q ss_pred CHHHHHHHhcCccEEEEcCCch-----hhhcccccCCCEEEEec
Q 021854 153 NKKFLKTALRGVRSIICPSEGF-----ISNAGSLKGVQHVILLS 191 (306)
Q Consensus 153 d~~~l~~~~~~~d~vi~~~~g~-----~~~~a~~~gvkr~V~iS 191 (306)
+.....+.++++|+||.+.... +.+.|...+++ +|...
T Consensus 80 ~~~~~~~f~~~~DvVv~a~Dn~~ar~~in~~c~~~~ip-~I~~g 122 (312)
T cd01489 80 DPDFNVEFFKQFDLVFNALDNLAARRHVNKMCLAADVP-LIESG 122 (312)
T ss_pred CccchHHHHhcCCEEEECCCCHHHHHHHHHHHHHCCCC-EEEEe
Confidence 6433457789999999884322 34455665554 44433
|
UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2. |
| >PRK00045 hemA glutamyl-tRNA reductase; Reviewed | Back alignment and domain information |
|---|
Probab=96.24 E-value=0.011 Score=57.35 Aligned_cols=71 Identities=23% Similarity=0.235 Sum_probs=52.6
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcCC
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE 172 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~ 172 (306)
..+++|+|.|+ |.+|..+++.|...|+ +|++..|+.+++...... +. .++.+.+++.+.+.++|+||.+++
T Consensus 180 ~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~-~g---~~~~~~~~~~~~l~~aDvVI~aT~ 251 (423)
T PRK00045 180 LSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEELAEE-FG---GEAIPLDELPEALAEADIVISSTG 251 (423)
T ss_pred ccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHH-cC---CcEeeHHHHHHHhccCCEEEECCC
Confidence 46789999998 9999999999999997 899999998774432211 00 122334566778889999999844
|
|
| >PRK05600 thiamine biosynthesis protein ThiF; Validated | Back alignment and domain information |
|---|
Probab=96.24 E-value=0.028 Score=53.71 Aligned_cols=89 Identities=19% Similarity=0.257 Sum_probs=59.6
Q ss_pred CccCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEecCcc-------------------hh---hh---hcCC--Ccee
Q 021854 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKR-------------------NA---ME---SFGT--YVES 146 (306)
Q Consensus 95 ~~~~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~l~R~~~-------------------~~---~~---~~~~--~v~~ 146 (306)
......+|+|.|+ |++|.+++..|+..|. +++++.++.= |+ .+ ...+ +++.
T Consensus 37 ~~l~~~~VliiG~-GglG~~v~~~La~~Gvg~i~ivD~D~ve~sNL~RQ~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~ 115 (370)
T PRK05600 37 ERLHNARVLVIGA-GGLGCPAMQSLASAGVGTITLIDDDTVDVSNIHRQILFGASDVGRPKVEVAAERLKEIQPDIRVNA 115 (370)
T ss_pred HHhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCCEEccccccccccCChhHCCCHHHHHHHHHHHHHCCCCeeEE
Confidence 3445789999999 8899999999999996 7777765521 10 00 1122 3444
Q ss_pred eeccCCCHHHHHHHhcCccEEEEcCCch-----hhhcccccCCC
Q 021854 147 MAGDASNKKFLKTALRGVRSIICPSEGF-----ISNAGSLKGVQ 185 (306)
Q Consensus 147 v~~D~~d~~~l~~~~~~~d~vi~~~~g~-----~~~~a~~~gvk 185 (306)
+...++ .+.+.+.++++|+||.+...+ +.++|.+.+++
T Consensus 116 ~~~~i~-~~~~~~~~~~~DlVid~~Dn~~~r~~in~~~~~~~iP 158 (370)
T PRK05600 116 LRERLT-AENAVELLNGVDLVLDGSDSFATKFLVADAAEITGTP 158 (370)
T ss_pred eeeecC-HHHHHHHHhCCCEEEECCCCHHHHHHHHHHHHHcCCC
Confidence 444453 456778899999999885543 34556666654
|
|
| >PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate | Back alignment and domain information |
|---|
Probab=96.24 E-value=0.0042 Score=51.90 Aligned_cols=72 Identities=14% Similarity=0.068 Sum_probs=47.8
Q ss_pred eEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhc--------CCCceeeeccCCCHHHHHHHhcCccEEEEcCC
Q 021854 101 AVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF--------GTYVESMAGDASNKKFLKTALRGVRSIICPSE 172 (306)
Q Consensus 101 ~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~--------~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~ 172 (306)
+|.|.|| |..|.+++..|+..|++|.+..|+++...... -++++.- ..+.=..+++++++++|++|.+.+
T Consensus 1 KI~ViGa-G~~G~AlA~~la~~g~~V~l~~~~~~~~~~i~~~~~n~~~~~~~~l~-~~i~~t~dl~~a~~~ad~IiiavP 78 (157)
T PF01210_consen 1 KIAVIGA-GNWGTALAALLADNGHEVTLWGRDEEQIEEINETRQNPKYLPGIKLP-ENIKATTDLEEALEDADIIIIAVP 78 (157)
T ss_dssp EEEEESS-SHHHHHHHHHHHHCTEEEEEETSCHHHHHHHHHHTSETTTSTTSBEE-TTEEEESSHHHHHTT-SEEEE-S-
T ss_pred CEEEECc-CHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHhCCCCCCCCCcccC-cccccccCHHHHhCcccEEEeccc
Confidence 6899999 99999999999999999999999986532211 0111111 011101356678999999999866
Q ss_pred ch
Q 021854 173 GF 174 (306)
Q Consensus 173 g~ 174 (306)
.+
T Consensus 79 s~ 80 (157)
T PF01210_consen 79 SQ 80 (157)
T ss_dssp GG
T ss_pred HH
Confidence 54
|
This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A .... |
| >TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain | Back alignment and domain information |
|---|
Probab=96.22 E-value=0.035 Score=48.64 Aligned_cols=72 Identities=15% Similarity=0.158 Sum_probs=54.8
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcch-hhhhcC-CCceeeeccCCCHHHHHHHhcCccEEEEcCCc
Q 021854 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-AMESFG-TYVESMAGDASNKKFLKTALRGVRSIICPSEG 173 (306)
Q Consensus 96 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~-~~~~~~-~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~g 173 (306)
+..+++|+|.|| |.+|..-++.|++.|++|++++.+... ...... .+++++..++.. ..+++++.||.+++.
T Consensus 6 ~l~gk~vlVvGg-G~va~rk~~~Ll~~ga~VtVvsp~~~~~l~~l~~~~~i~~~~~~~~~-----~dl~~~~lVi~at~d 79 (205)
T TIGR01470 6 NLEGRAVLVVGG-GDVALRKARLLLKAGAQLRVIAEELESELTLLAEQGGITWLARCFDA-----DILEGAFLVIAATDD 79 (205)
T ss_pred EcCCCeEEEECc-CHHHHHHHHHHHHCCCEEEEEcCCCCHHHHHHHHcCCEEEEeCCCCH-----HHhCCcEEEEECCCC
Confidence 346799999999 999999999999999999999876653 222222 368888888763 236789999887543
|
This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms. |
| >PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.21 E-value=0.018 Score=55.84 Aligned_cols=67 Identities=16% Similarity=0.073 Sum_probs=50.7
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcCC
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE 172 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~ 172 (306)
..+++|+|+|+ |.||+.+++.|...|.+|+++.+++.+.......+++++ + ++++++++|+||.+++
T Consensus 210 l~Gk~VlViG~-G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~~A~~~G~~v~-----~---l~eal~~aDVVI~aTG 276 (425)
T PRK05476 210 IAGKVVVVAGY-GDVGKGCAQRLRGLGARVIVTEVDPICALQAAMDGFRVM-----T---MEEAAELGDIFVTATG 276 (425)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCchhhHHHHhcCCEec-----C---HHHHHhCCCEEEECCC
Confidence 46899999998 999999999999999999999988876433222233321 2 3566789999998854
|
|
| >TIGR01035 hemA glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=96.20 E-value=0.012 Score=57.08 Aligned_cols=70 Identities=16% Similarity=0.127 Sum_probs=52.6
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCC-CeEEEEecCcchhhhhcCC-CceeeeccCCCHHHHHHHhcCccEEEEcCC
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAMESFGT-YVESMAGDASNKKFLKTALRGVRSIICPSE 172 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~l~R~~~~~~~~~~~-~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~ 172 (306)
..+++|+|.|+ |.+|..+++.|...| .+|+++.|+.+++.+.... +... .+.+++.+++.++|+||.+++
T Consensus 178 l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~g~~~-----i~~~~l~~~l~~aDvVi~aT~ 249 (417)
T TIGR01035 178 LKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAKELGGEA-----VKFEDLEEYLAEADIVISSTG 249 (417)
T ss_pred ccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCeE-----eeHHHHHHHHhhCCEEEECCC
Confidence 56789999998 999999999999999 7899999998774432211 1111 233567788889999999843
|
This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA. |
| >PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B | Back alignment and domain information |
|---|
Probab=96.19 E-value=0.016 Score=44.89 Aligned_cols=83 Identities=11% Similarity=0.202 Sum_probs=55.2
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcCCch--
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEGF-- 174 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~g~-- 174 (306)
..+++|||.|+ |.+|..=++.|++.|.+|++++.+.+..+ ..+++..-++ +..+++++.||.+++..
T Consensus 5 l~~~~vlVvGg-G~va~~k~~~Ll~~gA~v~vis~~~~~~~----~~i~~~~~~~------~~~l~~~~lV~~at~d~~~ 73 (103)
T PF13241_consen 5 LKGKRVLVVGG-GPVAARKARLLLEAGAKVTVISPEIEFSE----GLIQLIRREF------EEDLDGADLVFAATDDPEL 73 (103)
T ss_dssp -TT-EEEEEEE-SHHHHHHHHHHCCCTBEEEEEESSEHHHH----TSCEEEESS-------GGGCTTESEEEE-SS-HHH
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCchhhhh----hHHHHHhhhH------HHHHhhheEEEecCCCHHH
Confidence 46899999999 99999999999999999999998861111 3455554443 23378899999875432
Q ss_pred ---hhhcccccCCCEEEEecC
Q 021854 175 ---ISNAGSLKGVQHVILLSQ 192 (306)
Q Consensus 175 ---~~~~a~~~gvkr~V~iSS 192 (306)
+...+++.++ +|+++.
T Consensus 74 n~~i~~~a~~~~i--~vn~~D 92 (103)
T PF13241_consen 74 NEAIYADARARGI--LVNVVD 92 (103)
T ss_dssp HHHHHHHHHHTTS--EEEETT
T ss_pred HHHHHHHHhhCCE--EEEECC
Confidence 3344554443 566554
|
|
| >cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E | Back alignment and domain information |
|---|
Probab=96.15 E-value=0.11 Score=46.33 Aligned_cols=128 Identities=13% Similarity=0.058 Sum_probs=70.2
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEecCcc-------------------hh---hh---hcCCC--ceeee
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKR-------------------NA---ME---SFGTY--VESMA 148 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~l~R~~~-------------------~~---~~---~~~~~--v~~v~ 148 (306)
....+|+|.|+ |++|+++++.|++.|. +++++..+.= |. .+ ...+. ++.+.
T Consensus 9 L~~~~VlVvG~-GGvGs~va~~Lar~GVg~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~inP~~~V~~~~ 87 (231)
T cd00755 9 LRNAHVAVVGL-GGVGSWAAEALARSGVGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDINPECEVDAVE 87 (231)
T ss_pred HhCCCEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHHCCCcEEEEee
Confidence 45689999999 8899999999999996 6666654331 00 00 11223 33333
Q ss_pred ccCCCHHHHHHHhc-CccEEEEcCCch-----hhhcccccCCCEEEEecCcccccCCCCc--ccccchHHHHHHHHHHHH
Q 021854 149 GDASNKKFLKTALR-GVRSIICPSEGF-----ISNAGSLKGVQHVILLSQLSVYRGSGGI--QALMKGNARKLAEQDESM 220 (306)
Q Consensus 149 ~D~~d~~~l~~~~~-~~d~vi~~~~g~-----~~~~a~~~gvkr~V~iSS~~~~~~~~~~--~~~~~~~a~~~~~~aE~~ 220 (306)
..+. .+.+...+. ++|+||.+.... +.+.|.+.+++ ||...+.+....+.-. .....+..--..+.....
T Consensus 88 ~~i~-~~~~~~l~~~~~D~VvdaiD~~~~k~~L~~~c~~~~ip-~I~s~g~g~~~dp~~i~i~di~~t~~~pla~~~R~~ 165 (231)
T cd00755 88 EFLT-PDNSEDLLGGDPDFVVDAIDSIRAKVALIAYCRKRKIP-VISSMGAGGKLDPTRIRVADISKTSGDPLARKVRKR 165 (231)
T ss_pred eecC-HhHHHHHhcCCCCEEEEcCCCHHHHHHHHHHHHHhCCC-EEEEeCCcCCCCCCeEEEccEeccccCcHHHHHHHH
Confidence 3333 455566664 689999884432 55667777765 4433333322111111 111111111124456667
Q ss_pred HHhcCCC
Q 021854 221 LMASGIP 227 (306)
Q Consensus 221 l~~sgi~ 227 (306)
|+..++.
T Consensus 166 Lrk~~~~ 172 (231)
T cd00755 166 LRKRGIF 172 (231)
T ss_pred HHHcCCC
Confidence 8887774
|
coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown. |
| >PRK14027 quinate/shikimate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.14 E-value=0.019 Score=52.87 Aligned_cols=72 Identities=13% Similarity=0.236 Sum_probs=49.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEecCcchhhhhcC---CCc--eeeeccCCCHHHHHHHhcCccEEEEcC
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFG---TYV--ESMAGDASNKKFLKTALRGVRSIICPS 171 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~l~R~~~~~~~~~~---~~v--~~v~~D~~d~~~l~~~~~~~d~vi~~~ 171 (306)
.+++++|.|| |+.|++++..|+..|. +|.++.|+.+++++... ... ..+. ..+...+...+..+|+||+++
T Consensus 126 ~~k~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~~~~~~~~~~--~~~~~~~~~~~~~~divINaT 202 (283)
T PRK14027 126 KLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVV--GVDARGIEDVIAAADGVVNAT 202 (283)
T ss_pred CCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhccCcceEE--ecCHhHHHHHHhhcCEEEEcC
Confidence 3689999999 8899999999999996 78899999887544321 111 1111 122223344456789999884
Q ss_pred C
Q 021854 172 E 172 (306)
Q Consensus 172 ~ 172 (306)
+
T Consensus 203 p 203 (283)
T PRK14027 203 P 203 (283)
T ss_pred C
Confidence 3
|
|
| >PTZ00075 Adenosylhomocysteinase; Provisional | Back alignment and domain information |
|---|
Probab=96.13 E-value=0.023 Score=55.63 Aligned_cols=68 Identities=15% Similarity=0.076 Sum_probs=51.0
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcCC
Q 021854 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE 172 (306)
Q Consensus 96 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~ 172 (306)
...+++|+|.|. |.||+.+++.|...|++|++..+++.+.......+++++ .++++++.+|+||.+++
T Consensus 251 ~LaGKtVgVIG~-G~IGr~vA~rL~a~Ga~ViV~e~dp~~a~~A~~~G~~~~--------~leell~~ADIVI~atG 318 (476)
T PTZ00075 251 MIAGKTVVVCGY-GDVGKGCAQALRGFGARVVVTEIDPICALQAAMEGYQVV--------TLEDVVETADIFVTATG 318 (476)
T ss_pred CcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHhcCceec--------cHHHHHhcCCEEEECCC
Confidence 456899999998 899999999999999999999888765422211233322 25567889999998743
|
|
| >TIGR00507 aroE shikimate 5-dehydrogenase | Back alignment and domain information |
|---|
Probab=96.10 E-value=0.017 Score=52.57 Aligned_cols=69 Identities=20% Similarity=0.175 Sum_probs=47.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhc---CCCceeeeccCCCHHHHHHHhcCccEEEEcCC
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF---GTYVESMAGDASNKKFLKTALRGVRSIICPSE 172 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~---~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~ 172 (306)
.+++++|+|+ |++|+.++..|++.|++|.++.|+.++.++.. ...-.....+..+ ..+.++|+||++++
T Consensus 116 ~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~~~~~~~~~~~-----~~~~~~DivInatp 187 (270)
T TIGR00507 116 PNQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAEELAERFQRYGEIQAFSMDE-----LPLHRVDLIINATS 187 (270)
T ss_pred cCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhcCceEEechhh-----hcccCccEEEECCC
Confidence 4689999999 89999999999999999999999987644322 1100111111111 22457899999844
|
This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain. |
| >PLN02928 oxidoreductase family protein | Back alignment and domain information |
|---|
Probab=96.10 E-value=0.02 Score=54.24 Aligned_cols=76 Identities=9% Similarity=0.021 Sum_probs=52.6
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh---cC-CCceeeeccCCCHHHHHHHhcCccEEEEcC
Q 021854 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FG-TYVESMAGDASNKKFLKTALRGVRSIICPS 171 (306)
Q Consensus 96 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~---~~-~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~ 171 (306)
...++++.|.|. |.||+.+++.|...|++|++..|...+.... ++ ..+..+........+++++++.+|+|+++.
T Consensus 156 ~l~gktvGIiG~-G~IG~~vA~~l~afG~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~ell~~aDiVvl~l 234 (347)
T PLN02928 156 TLFGKTVFILGY-GAIGIELAKRLRPFGVKLLATRRSWTSEPEDGLLIPNGDVDDLVDEKGGHEDIYEFAGEADIVVLCC 234 (347)
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHhhCCCEEEEECCCCChhhhhhhccccccccccccccCcccCHHHHHhhCCEEEECC
Confidence 456899999998 9999999999999999999998864331111 00 111111111124567889999999999773
Q ss_pred C
Q 021854 172 E 172 (306)
Q Consensus 172 ~ 172 (306)
+
T Consensus 235 P 235 (347)
T PLN02928 235 T 235 (347)
T ss_pred C
Confidence 3
|
|
| >PRK08655 prephenate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.08 E-value=0.013 Score=57.34 Aligned_cols=66 Identities=15% Similarity=0.082 Sum_probs=48.0
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcC-CCceeeeccCCCHHHHHHHhcCccEEEEcCC
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG-TYVESMAGDASNKKFLKTALRGVRSIICPSE 172 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~-~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~ 172 (306)
|+|+|.||.|.+|..+++.|.+.|++|.+..|++++..+... .++. .. ....+++.++|+||.+.+
T Consensus 1 MkI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a~~~gv~-----~~--~~~~e~~~~aDvVIlavp 67 (437)
T PRK08655 1 MKISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEVAKELGVE-----YA--NDNIDAAKDADIVIISVP 67 (437)
T ss_pred CEEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHcCCe-----ec--cCHHHHhccCCEEEEecC
Confidence 579999999999999999999999999999998866322111 1221 11 123456778899998744
|
|
| >PRK11559 garR tartronate semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.07 E-value=0.017 Score=53.20 Aligned_cols=66 Identities=12% Similarity=0.019 Sum_probs=48.4
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcCC
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE 172 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~ 172 (306)
.++|.|.|. |.+|..+++.|++.|++|.+..|++++.......++.. ..++.++++++|+||.+.+
T Consensus 2 ~~~IgviG~-G~mG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~~g~~~-------~~~~~e~~~~~d~vi~~vp 67 (296)
T PRK11559 2 TMKVGFIGL-GIMGKPMSKNLLKAGYSLVVYDRNPEAVAEVIAAGAET-------ASTAKAVAEQCDVIITMLP 67 (296)
T ss_pred CceEEEEcc-CHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCee-------cCCHHHHHhcCCEEEEeCC
Confidence 468999987 99999999999999999999999887654332222211 1234456778999998743
|
|
| >TIGR00978 asd_EA aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms) | Back alignment and domain information |
|---|
Probab=96.05 E-value=0.023 Score=53.60 Aligned_cols=88 Identities=16% Similarity=0.101 Sum_probs=52.0
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCC-CeEEEEecCcchhhhhcCCC------------ce-eeeccCCCHHHHHHHhcCcc
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAMESFGTY------------VE-SMAGDASNKKFLKTALRGVR 165 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~g-~~V~~l~R~~~~~~~~~~~~------------v~-~v~~D~~d~~~l~~~~~~~d 165 (306)
++|+|+||+|++|+++++.|..+. .++..++++.+......... +. ...-++ +.+ .+.++|
T Consensus 1 ~kVaIvGatG~~G~~L~~~l~~~~~~~l~~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~----~~~~~D 75 (341)
T TIGR00978 1 MRVAVLGATGLVGQKFVKLLAKHPYFELAKVVASPRSAGKRYGEAVKWIEPGDMPEYVRDLPIVEP-EPV----ASKDVD 75 (341)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCceEEEEEEChhhcCCcchhhccccccCCCccccceeEEEeC-CHH----HhccCC
Confidence 479999999999999999988866 68888865543211111100 01 011111 222 357899
Q ss_pred EEEEcCCch----hhhcccccCCCEEEEecCc
Q 021854 166 SIICPSEGF----ISNAGSLKGVQHVILLSQL 193 (306)
Q Consensus 166 ~vi~~~~g~----~~~~a~~~gvkr~V~iSS~ 193 (306)
+||.+.+.. +...+.+.|++ +|..|+.
T Consensus 76 vVf~a~p~~~s~~~~~~~~~~G~~-VIDlsg~ 106 (341)
T TIGR00978 76 IVFSALPSEVAEEVEPKLAEAGKP-VFSNASN 106 (341)
T ss_pred EEEEeCCHHHHHHHHHHHHHCCCE-EEECChh
Confidence 999885432 33444456664 5555554
|
Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. Separate models are built for the two types in order to exclude the USG-1 protein, found in several species, which is specifically related to the Bacillus subtilis type of aspartate-semialdehyde dehydrogenase. Members of this type are found primarily in organisms that lack peptidoglycan. |
| >PRK11863 N-acetyl-gamma-glutamyl-phosphate reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.05 E-value=0.023 Score=52.98 Aligned_cols=79 Identities=15% Similarity=0.096 Sum_probs=49.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCC-CeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcCCc-h-
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG-F- 174 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~g-~- 174 (306)
|+.+|.|.||||++|.++++.|..+. .++..+..+..+ ++.+ .+..+.++|+||.+.+. .
T Consensus 1 ~~~~VaIvGAtGy~G~eLlrlL~~hp~~~l~~~~s~~~~--------------~~~~---~~~~~~~~DvvFlalp~~~s 63 (313)
T PRK11863 1 MKPKVFIDGEAGTTGLQIRERLAGRSDIELLSIPEAKRK--------------DAAA---RRELLNAADVAILCLPDDAA 63 (313)
T ss_pred CCcEEEEECCCCHHHHHHHHHHhcCCCeEEEEEecCCCC--------------cccC---chhhhcCCCEEEECCCHHHH
Confidence 46799999999999999999888776 355555544322 1111 23456789999998543 2
Q ss_pred --hhhcccccCCCEEEEecCcc
Q 021854 175 --ISNAGSLKGVQHVILLSQLS 194 (306)
Q Consensus 175 --~~~~a~~~gvkr~V~iSS~~ 194 (306)
+...+.+.|+ ++|=.|+..
T Consensus 64 ~~~~~~~~~~g~-~VIDlSadf 84 (313)
T PRK11863 64 REAVALIDNPAT-RVIDASTAH 84 (313)
T ss_pred HHHHHHHHhCCC-EEEECChhh
Confidence 2222333444 466666643
|
|
| >cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=96.05 E-value=0.016 Score=53.95 Aligned_cols=70 Identities=19% Similarity=0.127 Sum_probs=51.4
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCC-CeEEEEecCcchhhhhcCC-CceeeeccCCCHHHHHHHhcCccEEEEcCC
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAMESFGT-YVESMAGDASNKKFLKTALRGVRSIICPSE 172 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~l~R~~~~~~~~~~~-~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~ 172 (306)
..+++|+|.|+ |.+|..+++.|...| .+|+++.|+.++..+.... +.. +.+.+++.+.+.++|+||.+++
T Consensus 176 l~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~g~~-----~~~~~~~~~~l~~aDvVi~at~ 247 (311)
T cd05213 176 LKGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAEELAKELGGN-----AVPLDELLELLNEADVVISATG 247 (311)
T ss_pred ccCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcCCe-----EEeHHHHHHHHhcCCEEEECCC
Confidence 35799999998 999999999999876 6899999998764332111 112 2234567777888999998844
|
Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, |
| >PRK06019 phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed | Back alignment and domain information |
|---|
Probab=96.04 E-value=0.036 Score=52.90 Aligned_cols=68 Identities=15% Similarity=0.209 Sum_probs=54.7
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEE
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIIC 169 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~ 169 (306)
+++|+|.|+ |.+|+.++..+.+.|++|+++..++........+ ..+.+|+.|.+.+.++.+.+|+|..
T Consensus 2 ~~~igilG~-Gql~~ml~~aa~~lG~~v~~~d~~~~~pa~~~ad--~~~~~~~~D~~~l~~~a~~~dvit~ 69 (372)
T PRK06019 2 MKTIGIIGG-GQLGRMLALAAAPLGYKVIVLDPDPDSPAAQVAD--EVIVADYDDVAALRELAEQCDVITY 69 (372)
T ss_pred CCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCCCCchhHhCc--eEEecCCCCHHHHHHHHhcCCEEEe
Confidence 478999999 8999999999999999999998776442222222 4566889999999999999998754
|
|
| >cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like | Back alignment and domain information |
|---|
Probab=96.04 E-value=0.051 Score=48.60 Aligned_cols=90 Identities=13% Similarity=0.115 Sum_probs=56.7
Q ss_pred eEEEEcCCChHHHHHHHHHHHCCC-eEEEEecCcch--------------------------hhhhcC-CCceeeeccCC
Q 021854 101 AVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRN--------------------------AMESFG-TYVESMAGDAS 152 (306)
Q Consensus 101 ~ilVtGatG~iG~~l~~~L~~~g~-~V~~l~R~~~~--------------------------~~~~~~-~~v~~v~~D~~ 152 (306)
+|+|.|+ |++|.++++.|+..|. +++++..+.=. +.+..+ .+++.+..++.
T Consensus 1 kVlvvG~-GGlG~eilk~La~~Gvg~i~ivD~D~Ve~sNLnRQflf~~~dvGk~Ka~va~~~l~~~np~v~i~~~~~~i~ 79 (234)
T cd01484 1 KVLLVGA-GGIGCELLKNLALMGFGQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKSEVAAEAVNDRNPNCKVVPYQNKVG 79 (234)
T ss_pred CEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEEcchhhccccCCChhhCChHHHHHHHHHHHHHCCCCEEEEEeccCC
Confidence 5899997 8899999999999996 66666543311 011112 13455666665
Q ss_pred CHHHH-HHHhcCccEEEEcCCch-----hhhcccccCCCEEEEecC
Q 021854 153 NKKFL-KTALRGVRSIICPSEGF-----ISNAGSLKGVQHVILLSQ 192 (306)
Q Consensus 153 d~~~l-~~~~~~~d~vi~~~~g~-----~~~~a~~~gvkr~V~iSS 192 (306)
+.+.. ...++++|+||.+.... +.+.+...+++ +|..++
T Consensus 80 ~~~~~~~~f~~~~DvVi~a~Dn~~aR~~ln~~c~~~~ip-lI~~g~ 124 (234)
T cd01484 80 PEQDFNDTFFEQFHIIVNALDNIIARRYVNGMLIFLIVP-LIESGT 124 (234)
T ss_pred hhhhchHHHHhCCCEEEECCCCHHHHHHHHHHHHHcCCC-EEEEcc
Confidence 43332 46788999999884432 44556666654 555444
|
E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou |
| >COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=96.04 E-value=0.016 Score=55.76 Aligned_cols=72 Identities=21% Similarity=0.215 Sum_probs=58.6
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCC-CeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcCC
Q 021854 96 EEARDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE 172 (306)
Q Consensus 96 ~~~~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~ 172 (306)
....+++||.|| |-+|.-+++.|..+| .+|++..|+.+++.++... +. +++...+.+...+..+|+||.+++
T Consensus 175 ~L~~~~vlvIGA-Gem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~-~~---~~~~~l~el~~~l~~~DvVissTs 247 (414)
T COG0373 175 SLKDKKVLVIGA-GEMGELVAKHLAEKGVKKITIANRTLERAEELAKK-LG---AEAVALEELLEALAEADVVISSTS 247 (414)
T ss_pred ccccCeEEEEcc-cHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHH-hC---CeeecHHHHHHhhhhCCEEEEecC
Confidence 457899999999 999999999999999 6899999999986654321 11 555667888899999999999833
|
|
| >PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.03 E-value=0.018 Score=55.06 Aligned_cols=55 Identities=15% Similarity=0.266 Sum_probs=43.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcCC
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE 172 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~ 172 (306)
..++|.|.||.|.+|..+++.|.+.|++|++..|+.. +..++++.++|+||.+.+
T Consensus 97 ~~~~I~IiGG~GlmG~slA~~l~~~G~~V~~~d~~~~--------------------~~~~~~~~~aDlVilavP 151 (374)
T PRK11199 97 DLRPVVIVGGKGQLGRLFAKMLTLSGYQVRILEQDDW--------------------DRAEDILADAGMVIVSVP 151 (374)
T ss_pred ccceEEEEcCCChhhHHHHHHHHHCCCeEEEeCCCcc--------------------hhHHHHHhcCCEEEEeCc
Confidence 3589999999999999999999999999999988531 123445667777777643
|
|
| >COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.03 E-value=0.031 Score=52.47 Aligned_cols=98 Identities=10% Similarity=0.036 Sum_probs=61.9
Q ss_pred CCccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcCCc
Q 021854 94 FPEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG 173 (306)
Q Consensus 94 ~~~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~g 173 (306)
....++++|+|+|+ |++|...++.+...|++|++++|+.+|.+....-+...+.. .+|.+.++..-+.+|+++...+.
T Consensus 162 ~~~~pG~~V~I~G~-GGlGh~avQ~Aka~ga~Via~~~~~~K~e~a~~lGAd~~i~-~~~~~~~~~~~~~~d~ii~tv~~ 239 (339)
T COG1064 162 ANVKPGKWVAVVGA-GGLGHMAVQYAKAMGAEVIAITRSEEKLELAKKLGADHVIN-SSDSDALEAVKEIADAIIDTVGP 239 (339)
T ss_pred cCCCCCCEEEEECC-cHHHHHHHHHHHHcCCeEEEEeCChHHHHHHHHhCCcEEEE-cCCchhhHHhHhhCcEEEECCCh
Confidence 34456899999999 58999998877779999999999999864322222233222 22555555554458999987443
Q ss_pred hhh-hcccc-cCCCEEEEecCc
Q 021854 174 FIS-NAGSL-KGVQHVILLSQL 193 (306)
Q Consensus 174 ~~~-~~a~~-~gvkr~V~iSS~ 193 (306)
... .+.+. ..-.++|.++-.
T Consensus 240 ~~~~~~l~~l~~~G~~v~vG~~ 261 (339)
T COG1064 240 ATLEPSLKALRRGGTLVLVGLP 261 (339)
T ss_pred hhHHHHHHHHhcCCEEEEECCC
Confidence 322 22111 122467777654
|
|
| >cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1 | Back alignment and domain information |
|---|
Probab=96.02 E-value=0.052 Score=47.20 Aligned_cols=94 Identities=12% Similarity=0.108 Sum_probs=58.9
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEecCcch-------------------h------hhhcCC--Cceee
Q 021854 96 EEARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRN-------------------A------MESFGT--YVESM 147 (306)
Q Consensus 96 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~l~R~~~~-------------------~------~~~~~~--~v~~v 147 (306)
.....+|+|.|+ |++|.++++.|+..|. +++++..+.-. + .....+ .++..
T Consensus 18 ~L~~s~VlIiG~-gglG~evak~La~~GVg~i~lvD~d~ve~snL~rqfl~~~~diG~~Ka~a~~~~L~~lNp~v~i~~~ 96 (197)
T cd01492 18 RLRSARILLIGL-KGLGAEIAKNLVLSGIGSLTILDDRTVTEEDLGAQFLIPAEDLGQNRAEASLERLRALNPRVKVSVD 96 (197)
T ss_pred HHHhCcEEEEcC-CHHHHHHHHHHHHcCCCEEEEEECCcccHhhCCCCccccHHHcCchHHHHHHHHHHHHCCCCEEEEE
Confidence 345789999998 6699999999999997 56666443210 0 001122 33444
Q ss_pred eccCCCHHHHHHHhcCccEEEEcCCch-----hhhcccccCCCEEEEecCc
Q 021854 148 AGDASNKKFLKTALRGVRSIICPSEGF-----ISNAGSLKGVQHVILLSQL 193 (306)
Q Consensus 148 ~~D~~d~~~l~~~~~~~d~vi~~~~g~-----~~~~a~~~gvkr~V~iSS~ 193 (306)
...+.+ ...+.++++|+||.+.... +.+.|.+.+++ +|+.++.
T Consensus 97 ~~~~~~--~~~~~~~~~dvVi~~~~~~~~~~~ln~~c~~~~ip-~i~~~~~ 144 (197)
T cd01492 97 TDDISE--KPEEFFSQFDVVVATELSRAELVKINELCRKLGVK-FYATGVH 144 (197)
T ss_pred ecCccc--cHHHHHhCCCEEEECCCCHHHHHHHHHHHHHcCCC-EEEEEec
Confidence 444432 2456688999999874432 45667778875 5555543
|
Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain. |
| >PRK06522 2-dehydropantoate 2-reductase; Reviewed | Back alignment and domain information |
|---|
Probab=96.01 E-value=0.017 Score=52.95 Aligned_cols=36 Identities=8% Similarity=0.124 Sum_probs=32.5
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchh
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA 136 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~ 136 (306)
|+|+|.|+ |.+|..++..|.+.|++|+++.|+.+..
T Consensus 1 m~I~IiG~-G~~G~~~a~~L~~~g~~V~~~~r~~~~~ 36 (304)
T PRK06522 1 MKIAILGA-GAIGGLFGAALAQAGHDVTLVARRGAHL 36 (304)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECChHHH
Confidence 47999998 9999999999999999999999977653
|
|
| >PLN02494 adenosylhomocysteinase | Back alignment and domain information |
|---|
Probab=95.99 E-value=0.027 Score=55.19 Aligned_cols=67 Identities=10% Similarity=0.118 Sum_probs=50.4
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcCC
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE 172 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~ 172 (306)
..+++++|.|. |.||+.+++.+...|++|+++.+++.+.......++.++ .++++++..|++|.+++
T Consensus 252 LaGKtVvViGy-G~IGr~vA~~aka~Ga~VIV~e~dp~r~~eA~~~G~~vv--------~leEal~~ADVVI~tTG 318 (477)
T PLN02494 252 IAGKVAVICGY-GDVGKGCAAAMKAAGARVIVTEIDPICALQALMEGYQVL--------TLEDVVSEADIFVTTTG 318 (477)
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhHHHHhcCCeec--------cHHHHHhhCCEEEECCC
Confidence 45899999999 899999999999999999999888865332222233322 24557788999998744
|
|
| >PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.99 E-value=0.015 Score=54.34 Aligned_cols=74 Identities=14% Similarity=0.074 Sum_probs=48.7
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCC--Cceeeec-----cCCCHHHHHHHhcCccEEEEcC
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGT--YVESMAG-----DASNKKFLKTALRGVRSIICPS 171 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~--~v~~v~~-----D~~d~~~l~~~~~~~d~vi~~~ 171 (306)
+++|.|.|+ |.+|..++..|++.|++|++..|++++.+..... +...+.+ .+.-..+..++++.+|+||.+.
T Consensus 4 ~m~I~iIG~-G~mG~~ia~~L~~~G~~V~~~~r~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~~~e~~~~aD~Vi~~v 82 (328)
T PRK14618 4 GMRVAVLGA-GAWGTALAVLAASKGVPVRLWARRPEFAAALAAERENREYLPGVALPAELYPTADPEEALAGADFAVVAV 82 (328)
T ss_pred CCeEEEECc-CHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhCcccccCCCCcCCCCeEEeCCHHHHHcCCCEEEEEC
Confidence 468999988 9999999999999999999999987653322110 0000000 0111123445678899999884
Q ss_pred Cc
Q 021854 172 EG 173 (306)
Q Consensus 172 ~g 173 (306)
+.
T Consensus 83 ~~ 84 (328)
T PRK14618 83 PS 84 (328)
T ss_pred ch
Confidence 43
|
|
| >cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy) | Back alignment and domain information |
|---|
Probab=95.96 E-value=0.032 Score=53.95 Aligned_cols=87 Identities=17% Similarity=0.099 Sum_probs=58.2
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcCCch--
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEGF-- 174 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~g~-- 174 (306)
..+++|+|.|+ |.||+.+++.+...|.+|+++.+++.++......++..+ + ++++++++|+||.+++..
T Consensus 200 l~GktVvViG~-G~IG~~va~~ak~~Ga~ViV~d~d~~R~~~A~~~G~~~~-----~---~~e~v~~aDVVI~atG~~~~ 270 (413)
T cd00401 200 IAGKVAVVAGY-GDVGKGCAQSLRGQGARVIVTEVDPICALQAAMEGYEVM-----T---MEEAVKEGDIFVTTTGNKDI 270 (413)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECChhhHHHHHhcCCEEc-----c---HHHHHcCCCEEEECCCCHHH
Confidence 46899999999 999999999999999999998888876443322333332 1 235678899999885432
Q ss_pred hhhc-ccc-cCCCEEEEecC
Q 021854 175 ISNA-GSL-KGVQHVILLSQ 192 (306)
Q Consensus 175 ~~~~-a~~-~gvkr~V~iSS 192 (306)
+... ... .+-..+++++.
T Consensus 271 i~~~~l~~mk~GgilvnvG~ 290 (413)
T cd00401 271 ITGEHFEQMKDGAIVCNIGH 290 (413)
T ss_pred HHHHHHhcCCCCcEEEEeCC
Confidence 2211 222 22236777763
|
The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+. |
| >PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.92 E-value=0.023 Score=52.76 Aligned_cols=35 Identities=6% Similarity=0.102 Sum_probs=32.0
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcc
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR 134 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~ 134 (306)
+|+|.|.|+ |.+|..+++.|.+.|++|++..|+..
T Consensus 4 ~m~I~iiG~-G~~G~~lA~~l~~~G~~V~~~~r~~~ 38 (308)
T PRK14619 4 PKTIAILGA-GAWGSTLAGLASANGHRVRVWSRRSG 38 (308)
T ss_pred CCEEEEECc-cHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 578999988 99999999999999999999999863
|
|
| >cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR) | Back alignment and domain information |
|---|
Probab=95.92 E-value=0.051 Score=49.29 Aligned_cols=95 Identities=16% Similarity=0.115 Sum_probs=60.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCH---HHHHHHh--cCccEEEEcCC
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNK---KFLKTAL--RGVRSIICPSE 172 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~---~~l~~~~--~~~d~vi~~~~ 172 (306)
.+++++|+|++|.+|..+++.+...|.+|+++.++.++.+.....++..+ .|..+. ..+.+.. +++|.++.+.+
T Consensus 144 ~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~d~vi~~~~ 222 (325)
T cd08253 144 AGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAELVRQAGADAV-FNYRAEDLADRILAATAGQGVDVIIEVLA 222 (325)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEE-EeCCCcCHHHHHHHHcCCCceEEEEECCc
Confidence 47899999999999999999999999999999998866432211122222 233332 2333333 36899998755
Q ss_pred chhhhcc-c-ccCCCEEEEecCc
Q 021854 173 GFISNAG-S-LKGVQHVILLSQL 193 (306)
Q Consensus 173 g~~~~~a-~-~~gvkr~V~iSS~ 193 (306)
+...... + -..-.++|.+++.
T Consensus 223 ~~~~~~~~~~l~~~g~~v~~~~~ 245 (325)
T cd08253 223 NVNLAKDLDVLAPGGRIVVYGSG 245 (325)
T ss_pred hHHHHHHHHhhCCCCEEEEEeec
Confidence 4322211 1 1223578877664
|
Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts |
| >TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating) | Back alignment and domain information |
|---|
Probab=95.90 E-value=0.026 Score=52.15 Aligned_cols=67 Identities=10% Similarity=0.032 Sum_probs=50.4
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcC
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS 171 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~ 171 (306)
|+|.|.|. |.+|..+++.|++.|++|.+..|++++.......... ...+.+.+.+.++.+|+||.+.
T Consensus 1 M~Ig~IGl-G~mG~~la~~L~~~g~~V~~~dr~~~~~~~l~~~g~~----~~~s~~~~~~~~~~~dvIi~~v 67 (298)
T TIGR00872 1 MQLGLIGL-GRMGANIVRRLAKRGHDCVGYDHDQDAVKAMKEDRTT----GVANLRELSQRLSAPRVVWVMV 67 (298)
T ss_pred CEEEEEcc-hHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCc----ccCCHHHHHhhcCCCCEEEEEc
Confidence 47999997 9999999999999999999999999875544332221 1235566666677889999873
|
This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle. |
| >PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=95.87 E-value=0.017 Score=53.58 Aligned_cols=73 Identities=14% Similarity=0.127 Sum_probs=48.4
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCC--Cceee-----eccCCCHHHHHHHhcCccEEEEcCC
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGT--YVESM-----AGDASNKKFLKTALRGVRSIICPSE 172 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~--~v~~v-----~~D~~d~~~l~~~~~~~d~vi~~~~ 172 (306)
++|.|.|+ |.+|..++..|++.|++|.++.|+++..+..... ..... ...+.-..+..++++++|+||.+.+
T Consensus 2 mkI~iiG~-G~mG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~v~ 80 (325)
T PRK00094 2 MKIAVLGA-GSWGTALAIVLARNGHDVTLWARDPEQAAEINADRENPRYLPGIKLPDNLRATTDLAEALADADLILVAVP 80 (325)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCcccccCCCCcCCCCeEEeCCHHHHHhCCCEEEEeCC
Confidence 58999998 9999999999999999999999987664322111 00000 0011111234456788999998844
Q ss_pred c
Q 021854 173 G 173 (306)
Q Consensus 173 g 173 (306)
.
T Consensus 81 ~ 81 (325)
T PRK00094 81 S 81 (325)
T ss_pred H
Confidence 3
|
|
| >PLN00203 glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=95.86 E-value=0.019 Score=57.22 Aligned_cols=72 Identities=13% Similarity=0.182 Sum_probs=53.5
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEecCcchhhhhcCC--CceeeeccCCCHHHHHHHhcCccEEEEcCC
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGT--YVESMAGDASNKKFLKTALRGVRSIICPSE 172 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~l~R~~~~~~~~~~~--~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~ 172 (306)
..+++|+|.|+ |.+|+.+++.|...|+ +|+++.|+.+++...... ++.+. +...+++..++.++|+||.+++
T Consensus 264 l~~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~i~---~~~~~dl~~al~~aDVVIsAT~ 338 (519)
T PLN00203 264 HASARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVEII---YKPLDEMLACAAEADVVFTSTS 338 (519)
T ss_pred CCCCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCceE---eecHhhHHHHHhcCCEEEEccC
Confidence 44789999999 9999999999999996 799999998875443211 22221 2233456678899999998843
|
|
| >COG0002 ArgC Acetylglutamate semialdehyde dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.86 E-value=0.027 Score=52.67 Aligned_cols=92 Identities=12% Similarity=0.054 Sum_probs=53.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCC-CeEEEEecCcch---hhhhcCCCce-e--eeccCCCHHHHHHHhcCccEEEEc
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRN---AMESFGTYVE-S--MAGDASNKKFLKTALRGVRSIICP 170 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~l~R~~~~---~~~~~~~~v~-~--v~~D~~d~~~l~~~~~~~d~vi~~ 170 (306)
++.+|.|.||+|+.|.+|++.|+.+. .++..++.+..+ ..+.++. .. . .....-|.+.+ ..+++|+||.+
T Consensus 1 ~~~kV~IvGasGYtG~EL~rlL~~Hp~ve~~~~ss~~~~g~~~~~~~p~-l~g~~~l~~~~~~~~~~--~~~~~DvvFla 77 (349)
T COG0002 1 MMIKVGIVGASGYTGLELLRLLAGHPDVELILISSRERAGKPVSDVHPN-LRGLVDLPFQTIDPEKI--ELDECDVVFLA 77 (349)
T ss_pred CCceEEEEcCCCCcHHHHHHHHhcCCCeEEEEeechhhcCCchHHhCcc-cccccccccccCChhhh--hcccCCEEEEe
Confidence 36899999999999999999998875 465555433321 2233331 11 1 12222233333 46679999998
Q ss_pred CC-chhhhc---ccccCCCEEEEecCc
Q 021854 171 SE-GFISNA---GSLKGVQHVILLSQL 193 (306)
Q Consensus 171 ~~-g~~~~~---a~~~gvkr~V~iSS~ 193 (306)
.+ +.-.++ ....|++ +|=+|..
T Consensus 78 lPhg~s~~~v~~l~~~g~~-VIDLSad 103 (349)
T COG0002 78 LPHGVSAELVPELLEAGCK-VIDLSAD 103 (349)
T ss_pred cCchhHHHHHHHHHhCCCe-EEECCcc
Confidence 44 332232 2334554 7766764
|
|
| >PRK12749 quinate/shikimate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=95.84 E-value=0.04 Score=50.84 Aligned_cols=73 Identities=8% Similarity=0.099 Sum_probs=49.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEecCcc---hhhh---hcCCC--ceeeeccCCCHHHHHHHhcCccEEE
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKR---NAME---SFGTY--VESMAGDASNKKFLKTALRGVRSII 168 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~l~R~~~---~~~~---~~~~~--v~~v~~D~~d~~~l~~~~~~~d~vi 168 (306)
.+++++|.|| |+.+++++..|+..|. +|.++.|+.+ ++++ .++.. ..+...++.+.+.+...+.++|+||
T Consensus 123 ~~k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~~~~~~~~~~~~~~~~~~l~~~~~~aDivI 201 (288)
T PRK12749 123 KGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALASADILT 201 (288)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhhhccCceEEEechhhhhhhhhhcccCCEEE
Confidence 4689999998 7789999999999996 8999999853 4332 22211 1122233333334555677899999
Q ss_pred EcC
Q 021854 169 CPS 171 (306)
Q Consensus 169 ~~~ 171 (306)
+++
T Consensus 202 NaT 204 (288)
T PRK12749 202 NGT 204 (288)
T ss_pred ECC
Confidence 983
|
|
| >PRK10537 voltage-gated potassium channel; Provisional | Back alignment and domain information |
|---|
Probab=95.83 E-value=0.041 Score=52.98 Aligned_cols=71 Identities=18% Similarity=0.261 Sum_probs=57.0
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHH-hcCccEEEEcCC
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA-LRGVRSIICPSE 172 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~-~~~~d~vi~~~~ 172 (306)
...++|.|. |.+|+.++++|.++|.+++++..+. .++..+.+..++.+|.+|.+.++++ ++.++.++.+.+
T Consensus 240 k~HvII~G~-g~lg~~v~~~L~~~g~~vvVId~d~--~~~~~~~g~~vI~GD~td~e~L~~AgI~~A~aVI~~t~ 311 (393)
T PRK10537 240 KDHFIICGH-SPLAINTYLGLRQRGQAVTVIVPLG--LEHRLPDDADLIPGDSSDSAVLKKAGAARARAILALRD 311 (393)
T ss_pred CCeEEEECC-ChHHHHHHHHHHHCCCCEEEEECch--hhhhccCCCcEEEeCCCCHHHHHhcCcccCCEEEEcCC
Confidence 467999998 8899999999999999998887653 2333445788999999999988764 577888887643
|
|
| >PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated | Back alignment and domain information |
|---|
Probab=95.79 E-value=0.046 Score=52.62 Aligned_cols=92 Identities=15% Similarity=0.140 Sum_probs=58.8
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEecCcch----------------------hhh---hcCCC--ceee
Q 021854 96 EEARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRN----------------------AME---SFGTY--VESM 147 (306)
Q Consensus 96 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~l~R~~~~----------------------~~~---~~~~~--v~~v 147 (306)
.....+|+|.|+ |++|.+++..|+..|. +++++..+.=. +.+ ...+. ++.+
T Consensus 39 ~L~~~~VlviG~-GGlGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~i~~~ 117 (392)
T PRK07878 39 RLKNARVLVIGA-GGLGSPTLLYLAAAGVGTLGIVEFDVVDESNLQRQVIHGQSDVGRSKAQSARDSIVEINPLVNVRLH 117 (392)
T ss_pred HHhcCCEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCEecCcccccccccChhcCCChHHHHHHHHHHHhCCCcEEEEE
Confidence 345789999999 8899999999999996 55555433210 000 11233 3344
Q ss_pred eccCCCHHHHHHHhcCccEEEEcCCch-----hhhcccccCCCEEEEe
Q 021854 148 AGDASNKKFLKTALRGVRSIICPSEGF-----ISNAGSLKGVQHVILL 190 (306)
Q Consensus 148 ~~D~~d~~~l~~~~~~~d~vi~~~~g~-----~~~~a~~~gvkr~V~i 190 (306)
...++ .+...+.++++|+||.+...+ +.++|.+.+++ ||+.
T Consensus 118 ~~~i~-~~~~~~~~~~~D~Vvd~~d~~~~r~~ln~~~~~~~~p-~v~~ 163 (392)
T PRK07878 118 EFRLD-PSNAVELFSQYDLILDGTDNFATRYLVNDAAVLAGKP-YVWG 163 (392)
T ss_pred eccCC-hhHHHHHHhcCCEEEECCCCHHHHHHHHHHHHHcCCC-EEEE
Confidence 44554 355677899999999885443 34566666654 4443
|
|
| >PRK06598 aspartate-semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=95.77 E-value=0.04 Score=52.45 Aligned_cols=89 Identities=18% Similarity=0.108 Sum_probs=50.3
Q ss_pred CeEEEEcCCChHHHHHHHHHHH-CCCe---EEEEecCcch-hhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcCCch
Q 021854 100 DAVLVTDGDSDIGQMVILSLIV-KRTR---IKALVKDKRN-AMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEGF 174 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~-~g~~---V~~l~R~~~~-~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~g~ 174 (306)
++|.|.||||.+|+++++.|+. ..+. ++.++..... ..-.+.. -.....+..|.+. +.++|++|.++++-
T Consensus 2 ~~VAIVGATG~vG~ell~llL~~~~f~~~~l~~~ss~~sg~~~~~f~g-~~~~v~~~~~~~~----~~~~Divf~a~~~~ 76 (369)
T PRK06598 2 KKVGFVGWRGMVGSVLMQRMVEENDFDLIEPVFFSTSQAGGAAPSFGG-KEGTLQDAFDIDA----LKKLDIIITCQGGD 76 (369)
T ss_pred eEEEEEeCCCHHHHHHHHHHHhCCCCCcCcEEEecchhhCCcccccCC-CcceEEecCChhH----hcCCCEEEECCCHH
Confidence 6899999999999999985554 4555 5555443211 1111221 1223334444333 57899999985543
Q ss_pred ----hhhcccccCCC-EEEEecCc
Q 021854 175 ----ISNAGSLKGVQ-HVILLSQL 193 (306)
Q Consensus 175 ----~~~~a~~~gvk-r~V~iSS~ 193 (306)
+...+.++|++ .+|=.||.
T Consensus 77 ~s~~~~~~~~~aG~~~~VID~Ss~ 100 (369)
T PRK06598 77 YTNEVYPKLRAAGWQGYWIDAAST 100 (369)
T ss_pred HHHHHHHHHHhCCCCeEEEECChH
Confidence 33334456764 34444443
|
|
| >PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional | Back alignment and domain information |
|---|
Probab=95.77 E-value=0.045 Score=51.07 Aligned_cols=67 Identities=15% Similarity=0.123 Sum_probs=51.2
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcCC
Q 021854 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE 172 (306)
Q Consensus 96 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~ 172 (306)
...+++|.|.|- |.||+.+++.|...|++|++..|..++.. .+..+ ....+++++++++|+|+++.+
T Consensus 133 ~l~g~tvgIvG~-G~IG~~vA~~l~afG~~V~~~~~~~~~~~-----~~~~~----~~~~~l~e~l~~aDvvv~~lP 199 (312)
T PRK15469 133 HREDFTIGILGA-GVLGSKVAQSLQTWGFPLRCWSRSRKSWP-----GVQSF----AGREELSAFLSQTRVLINLLP 199 (312)
T ss_pred CcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCCCC-----Cceee----cccccHHHHHhcCCEEEECCC
Confidence 345799999988 99999999999999999999988654321 12211 134578899999999997733
|
|
| >TIGR00936 ahcY adenosylhomocysteinase | Back alignment and domain information |
|---|
Probab=95.77 E-value=0.039 Score=53.28 Aligned_cols=67 Identities=16% Similarity=0.056 Sum_probs=50.2
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcCC
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE 172 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~ 172 (306)
..+++|+|.|. |.||+.+++.+...|.+|+++.+++.+.......++.++ + ++++++++|++|.+++
T Consensus 193 l~Gk~VvViG~-G~IG~~vA~~ak~~Ga~ViV~d~dp~r~~~A~~~G~~v~-----~---leeal~~aDVVItaTG 259 (406)
T TIGR00936 193 IAGKTVVVAGY-GWCGKGIAMRARGMGARVIVTEVDPIRALEAAMDGFRVM-----T---MEEAAKIGDIFITATG 259 (406)
T ss_pred CCcCEEEEECC-CHHHHHHHHHHhhCcCEEEEEeCChhhHHHHHhcCCEeC-----C---HHHHHhcCCEEEECCC
Confidence 46899999998 999999999999999999999888866433222333322 2 2346788999998754
|
This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704). |
| >cd08293 PTGR2 Prostaglandin reductase | Back alignment and domain information |
|---|
Probab=95.76 E-value=0.075 Score=49.43 Aligned_cols=91 Identities=16% Similarity=0.191 Sum_probs=57.2
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCC-eEEEEecCcchhhhh---cCCCceeeeccCCC---HHHHHHHh-cCccEEEEcC
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMES---FGTYVESMAGDASN---KKFLKTAL-RGVRSIICPS 171 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~g~-~V~~l~R~~~~~~~~---~~~~v~~v~~D~~d---~~~l~~~~-~~~d~vi~~~ 171 (306)
++|+|+||+|.+|..+++.+...|+ +|++++++.++.... ++ +..+ .|..+ .+.+.+.. +++|++|.+.
T Consensus 156 ~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lG--a~~v-i~~~~~~~~~~i~~~~~~gvd~vid~~ 232 (345)
T cd08293 156 QTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELG--FDAA-INYKTDNVAERLRELCPEGVDVYFDNV 232 (345)
T ss_pred CEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcC--CcEE-EECCCCCHHHHHHHHCCCCceEEEECC
Confidence 8999999999999999988878898 799998888764322 33 2222 22222 12333332 4689999875
Q ss_pred Cchhhh-ccc-ccCCCEEEEecCc
Q 021854 172 EGFISN-AGS-LKGVQHVILLSQL 193 (306)
Q Consensus 172 ~g~~~~-~a~-~~gvkr~V~iSS~ 193 (306)
++.... ... -..-.++|.++..
T Consensus 233 g~~~~~~~~~~l~~~G~iv~~G~~ 256 (345)
T cd08293 233 GGEISDTVISQMNENSHIILCGQI 256 (345)
T ss_pred CcHHHHHHHHHhccCCEEEEEeee
Confidence 543222 111 1234578877643
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid |
| >PF13380 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5A_A 2D59_A 2E6U_X 1IUL_A 1IUK_A 1Y81_A 2DUW_A | Back alignment and domain information |
|---|
Probab=95.76 E-value=0.018 Score=45.71 Aligned_cols=81 Identities=12% Similarity=0.108 Sum_probs=48.1
Q ss_pred CeEEEEcCC---ChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcCC-ch-
Q 021854 100 DAVLVTDGD---SDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE-GF- 174 (306)
Q Consensus 100 ~~ilVtGat---G~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~-g~- 174 (306)
|+|+|.|++ +..|..+++.|.+.|++|+.+.-...... +.+. +.++.+.-..+|.++.+.+ ..
T Consensus 1 ksiAVvGaS~~~~~~g~~v~~~l~~~G~~v~~Vnp~~~~i~-----G~~~-------y~sl~e~p~~iDlavv~~~~~~~ 68 (116)
T PF13380_consen 1 KSIAVVGASDNPGKFGYRVLRNLKAAGYEVYPVNPKGGEIL-----GIKC-------YPSLAEIPEPIDLAVVCVPPDKV 68 (116)
T ss_dssp -EEEEET--SSTTSHHHHHHHHHHHTT-EEEEESTTCSEET-----TEE--------BSSGGGCSST-SEEEE-S-HHHH
T ss_pred CEEEEEcccCCCCChHHHHHHHHHhCCCEEEEECCCceEEC-----cEEe-------eccccCCCCCCCEEEEEcCHHHH
Confidence 589999998 66899999999999999999854442211 1111 1222221256788887744 22
Q ss_pred --hhhcccccCCCEEEEecC
Q 021854 175 --ISNAGSLKGVQHVILLSQ 192 (306)
Q Consensus 175 --~~~~a~~~gvkr~V~iSS 192 (306)
+.+.+.+.|++.+++.++
T Consensus 69 ~~~v~~~~~~g~~~v~~~~g 88 (116)
T PF13380_consen 69 PEIVDEAAALGVKAVWLQPG 88 (116)
T ss_dssp HHHHHHHHHHT-SEEEE-TT
T ss_pred HHHHHHHHHcCCCEEEEEcc
Confidence 455566779999999887
|
|
| >PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=95.73 E-value=0.033 Score=52.17 Aligned_cols=73 Identities=5% Similarity=-0.038 Sum_probs=49.5
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh-------c----CCCce--eeeccCCCHHHHHHHhcCcc
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------F----GTYVE--SMAGDASNKKFLKTALRGVR 165 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~-------~----~~~v~--~v~~D~~d~~~l~~~~~~~d 165 (306)
-++|.|.|+ |-+|..++..++..|++|++..++++..... . ..+.. .....+.-..+++++++++|
T Consensus 7 i~~VaVIGa-G~MG~giA~~~a~aG~~V~l~D~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~l~~av~~aD 85 (321)
T PRK07066 7 IKTFAAIGS-GVIGSGWVARALAHGLDVVAWDPAPGAEAALRANVANAWPALERQGLAPGASPARLRFVATIEACVADAD 85 (321)
T ss_pred CCEEEEECc-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCChhhHHhhceecCCHHHHhcCCC
Confidence 478999998 9999999999999999999999987642210 0 00000 00011121235668889999
Q ss_pred EEEEcCC
Q 021854 166 SIICPSE 172 (306)
Q Consensus 166 ~vi~~~~ 172 (306)
.|+-+.+
T Consensus 86 lViEavp 92 (321)
T PRK07066 86 FIQESAP 92 (321)
T ss_pred EEEECCc
Confidence 9998743
|
|
| >cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=95.73 E-value=0.085 Score=48.35 Aligned_cols=95 Identities=13% Similarity=0.083 Sum_probs=61.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHH---HHh--cCccEEEEcCC
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLK---TAL--RGVRSIICPSE 172 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~---~~~--~~~d~vi~~~~ 172 (306)
.+.+++|+|+++.+|..+++.+...|++|++++++.++........... ..|..+.+..+ ... .++|.++++.+
T Consensus 166 ~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~d~~i~~~g 244 (342)
T cd08266 166 PGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERAKELGADY-VIDYRKEDFVREVRELTGKRGVDVVVEHVG 244 (342)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCe-EEecCChHHHHHHHHHhCCCCCcEEEECCc
Confidence 4689999999999999999999999999999988876543221112221 23444433322 222 25799998755
Q ss_pred chhh----hcccccCCCEEEEecCccc
Q 021854 173 GFIS----NAGSLKGVQHVILLSQLSV 195 (306)
Q Consensus 173 g~~~----~~a~~~gvkr~V~iSS~~~ 195 (306)
+... +.... -.++|.+++...
T Consensus 245 ~~~~~~~~~~l~~--~G~~v~~~~~~~ 269 (342)
T cd08266 245 AATWEKSLKSLAR--GGRLVTCGATTG 269 (342)
T ss_pred HHHHHHHHHHhhc--CCEEEEEecCCC
Confidence 4322 22222 257888876643
|
This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone |
| >cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity | Back alignment and domain information |
|---|
Probab=95.71 E-value=0.069 Score=49.14 Aligned_cols=95 Identities=15% Similarity=0.109 Sum_probs=59.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCH---HHHHHHh-cCccEEEEcCCc
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNK---KFLKTAL-RGVRSIICPSEG 173 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~---~~l~~~~-~~~d~vi~~~~g 173 (306)
++.+|+|+||+|.+|..+++.+...|.+|++++++.++......-+++.+ .|..+. +.+.+.. .++|+++.+.++
T Consensus 143 ~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l~~~Ga~~v-i~~~~~~~~~~v~~~~~~gvd~vld~~g~ 221 (329)
T cd08294 143 AGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWLKELGFDAV-FNYKTVSLEEALKEAAPDGIDCYFDNVGG 221 (329)
T ss_pred CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEE-EeCCCccHHHHHHHHCCCCcEEEEECCCH
Confidence 46899999999999999998888899999999988876432222223222 233322 2233322 468999987554
Q ss_pred hhhh-cccc-cCCCEEEEecCc
Q 021854 174 FISN-AGSL-KGVQHVILLSQL 193 (306)
Q Consensus 174 ~~~~-~a~~-~gvkr~V~iSS~ 193 (306)
.... ..+. ..-.++|.++..
T Consensus 222 ~~~~~~~~~l~~~G~iv~~g~~ 243 (329)
T cd08294 222 EFSSTVLSHMNDFGRVAVCGSI 243 (329)
T ss_pred HHHHHHHHhhccCCEEEEEcch
Confidence 3222 2111 233578877654
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac |
| >KOG0172 consensus Lysine-ketoglutarate reductase/saccharopine dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.71 E-value=0.013 Score=55.44 Aligned_cols=75 Identities=12% Similarity=0.143 Sum_probs=64.6
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCC-CeEEEEecCcchhhhhcC-CCceeeeccCCCHH-HHHHHhcCccEEEEcCCch
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAMESFG-TYVESMAGDASNKK-FLKTALRGVRSIICPSEGF 174 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~l~R~~~~~~~~~~-~~v~~v~~D~~d~~-~l~~~~~~~d~vi~~~~g~ 174 (306)
++.||+.|+ |++-+-++..|.+++ .+|++.+|....+++... .+++.|..|+.+.+ .+++..+..|.++...+..
T Consensus 2 ~~~vlllgs-g~v~~p~~d~ls~~~dv~vtva~~~~~~~~~~~~~~~~~av~ldv~~~~~~L~~~v~~~D~viSLlP~t 79 (445)
T KOG0172|consen 2 KKGVLLLGS-GFVSRPVADFLSRKKDVNVTVASRTLKDAEALVKGINIKAVSLDVADEELALRKEVKPLDLVISLLPYT 79 (445)
T ss_pred CcceEEecC-ccccchHHHHHhhcCCceEEEehhhHHHHHHHhcCCCccceEEEccchHHHHHhhhcccceeeeeccch
Confidence 688999998 999999999999876 699999999888776654 57999999999988 8999999999999775533
|
|
| >COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.70 E-value=0.026 Score=51.92 Aligned_cols=69 Identities=19% Similarity=0.230 Sum_probs=48.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCC-CeEEEEecCcchhhhh---cCCCc-eeeeccCCCHHHHHHHhcCccEEEEcC
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAMES---FGTYV-ESMAGDASNKKFLKTALRGVRSIICPS 171 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~l~R~~~~~~~~---~~~~v-~~v~~D~~d~~~l~~~~~~~d~vi~~~ 171 (306)
.+++++|.|| |+.+++++.+|++.| .+|+++.|+.++++++ ++... .....++.+.+... ..|.+|+++
T Consensus 125 ~~~~vlilGA-GGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~~~~~~~~~~~~~~~----~~dliINaT 198 (283)
T COG0169 125 TGKRVLILGA-GGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGAAVEAAALADLEGLE----EADLLINAT 198 (283)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccccccccccccccccc----ccCEEEECC
Confidence 4699999999 889999999999999 4899999999885544 33211 11122222222211 689999983
|
|
| >KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only] | Back alignment and domain information |
|---|
Probab=95.69 E-value=0.068 Score=50.65 Aligned_cols=75 Identities=16% Similarity=0.182 Sum_probs=49.5
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcch--hhhhcCCCceeeeccCCCHHHHHHHhc----CccEEEE
Q 021854 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN--AMESFGTYVESMAGDASNKKFLKTALR----GVRSIIC 169 (306)
Q Consensus 96 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~--~~~~~~~~v~~v~~D~~d~~~l~~~~~----~~d~vi~ 169 (306)
...++.|||.||+|++|++.++-+...|...++.+++.++ +...++. -...|+.+.+-.+...+ ++|+|+-
T Consensus 155 ~~~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~~l~k~lGA---d~vvdy~~~~~~e~~kk~~~~~~DvVlD 231 (347)
T KOG1198|consen 155 LSKGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKLELVKKLGA---DEVVDYKDENVVELIKKYTGKGVDVVLD 231 (347)
T ss_pred cCCCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchHHHHHHcCC---cEeecCCCHHHHHHHHhhcCCCccEEEE
Confidence 3357899999999999999998777788444444444444 2233331 23467777555555544 5899998
Q ss_pred cCCc
Q 021854 170 PSEG 173 (306)
Q Consensus 170 ~~~g 173 (306)
+.++
T Consensus 232 ~vg~ 235 (347)
T KOG1198|consen 232 CVGG 235 (347)
T ss_pred CCCC
Confidence 8444
|
|
| >PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated | Back alignment and domain information |
|---|
Probab=95.63 E-value=0.025 Score=56.15 Aligned_cols=74 Identities=11% Similarity=-0.025 Sum_probs=49.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcC---------CCce---e-eeccCCCHHHHHHHhcCc
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG---------TYVE---S-MAGDASNKKFLKTALRGV 164 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~---------~~v~---~-v~~D~~d~~~l~~~~~~~ 164 (306)
+-++|.|.|+ |.+|..++..|+..|++|++..+++++...... .... . ..+.+.-..++.++++++
T Consensus 3 ~i~kIavIG~-G~MG~~iA~~la~~G~~V~v~D~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~i~~~~~~~ea~~~a 81 (495)
T PRK07531 3 MIMKAACIGG-GVIGGGWAARFLLAGIDVAVFDPHPEAERIIGEVLANAERAYAMLTDAPLPPEGRLTFCASLAEAVAGA 81 (495)
T ss_pred CcCEEEEECc-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHhhhccchhhhhhceEeeCCHHHHhcCC
Confidence 3468999987 999999999999999999999998876432100 0000 0 001111123456778999
Q ss_pred cEEEEcCC
Q 021854 165 RSIICPSE 172 (306)
Q Consensus 165 d~vi~~~~ 172 (306)
|+|+.+.+
T Consensus 82 D~Vieavp 89 (495)
T PRK07531 82 DWIQESVP 89 (495)
T ss_pred CEEEEcCc
Confidence 99998743
|
|
| >PRK07877 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=95.62 E-value=0.069 Score=55.21 Aligned_cols=94 Identities=14% Similarity=0.214 Sum_probs=64.6
Q ss_pred CccCCCeEEEEcCCChHHHHHHHHHHHCCC--eEEEEecCcch---------------------hhh---hcCC--Ccee
Q 021854 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRT--RIKALVKDKRN---------------------AME---SFGT--YVES 146 (306)
Q Consensus 95 ~~~~~~~ilVtGatG~iG~~l~~~L~~~g~--~V~~l~R~~~~---------------------~~~---~~~~--~v~~ 146 (306)
......+|+|.|+ | +|+.++..|+..|. +++++..+.=. +.+ ...+ +++.
T Consensus 103 ~~L~~~~V~IvG~-G-lGs~~a~~LaraGvvG~l~lvD~D~ve~sNLnRq~~~~~diG~~Kv~~a~~~l~~inp~i~v~~ 180 (722)
T PRK07877 103 ERLGRLRIGVVGL-S-VGHAIAHTLAAEGLCGELRLADFDTLELSNLNRVPAGVFDLGVNKAVVAARRIAELDPYLPVEV 180 (722)
T ss_pred HHHhcCCEEEEEe-c-HHHHHHHHHHHccCCCeEEEEcCCEEcccccccccCChhhcccHHHHHHHHHHHHHCCCCEEEE
Confidence 3556789999999 7 99999999999994 77776543310 010 1122 4555
Q ss_pred eeccCCCHHHHHHHhcCccEEEEcCCch-----hhhcccccCCCEEEEecC
Q 021854 147 MAGDASNKKFLKTALRGVRSIICPSEGF-----ISNAGSLKGVQHVILLSQ 192 (306)
Q Consensus 147 v~~D~~d~~~l~~~~~~~d~vi~~~~g~-----~~~~a~~~gvkr~V~iSS 192 (306)
+...++ .+.+.++++++|+||.+...+ +.++|.+.++. +|+-++
T Consensus 181 ~~~~i~-~~n~~~~l~~~DlVvD~~D~~~~R~~ln~~a~~~~iP-~i~~~~ 229 (722)
T PRK07877 181 FTDGLT-EDNVDAFLDGLDVVVEECDSLDVKVLLREAARARRIP-VLMATS 229 (722)
T ss_pred EeccCC-HHHHHHHhcCCCEEEECCCCHHHHHHHHHHHHHcCCC-EEEEcC
Confidence 555555 678999999999999886554 44667777775 555554
|
|
| >PLN03154 putative allyl alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.62 E-value=0.077 Score=49.95 Aligned_cols=93 Identities=14% Similarity=0.123 Sum_probs=58.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhh---hcCCCceeeeccCC---CH-HHHHHHh-cCccEEEE
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDAS---NK-KFLKTAL-RGVRSIIC 169 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~---~~~~~v~~v~~D~~---d~-~~l~~~~-~~~d~vi~ 169 (306)
.+.+|+|+||+|.+|...++.+...|.+|++++++.++... .++ ...+ .|.. +. +.+.+.. .++|++|.
T Consensus 158 ~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~~lG--a~~v-i~~~~~~~~~~~i~~~~~~gvD~v~d 234 (348)
T PLN03154 158 KGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLG--FDEA-FNYKEEPDLDAALKRYFPEGIDIYFD 234 (348)
T ss_pred CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhcC--CCEE-EECCCcccHHHHHHHHCCCCcEEEEE
Confidence 47899999999999999998888889999998888776432 233 2222 2332 21 2233322 36899998
Q ss_pred cCCchhhhc-cc-ccCCCEEEEecCc
Q 021854 170 PSEGFISNA-GS-LKGVQHVILLSQL 193 (306)
Q Consensus 170 ~~~g~~~~~-a~-~~gvkr~V~iSS~ 193 (306)
+.++..... .. -..-.++|.++..
T Consensus 235 ~vG~~~~~~~~~~l~~~G~iv~~G~~ 260 (348)
T PLN03154 235 NVGGDMLDAALLNMKIHGRIAVCGMV 260 (348)
T ss_pred CCCHHHHHHHHHHhccCCEEEEECcc
Confidence 755432222 11 1233578877654
|
|
| >PRK07411 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=95.62 E-value=0.07 Score=51.37 Aligned_cols=88 Identities=17% Similarity=0.162 Sum_probs=57.1
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEecCcch----------------------hhh---hcCC--Cceee
Q 021854 96 EEARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRN----------------------AME---SFGT--YVESM 147 (306)
Q Consensus 96 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~l~R~~~~----------------------~~~---~~~~--~v~~v 147 (306)
.....+|+|.|+ |++|.++++.|+..|. +++++..+.=. +.+ ...+ +++.+
T Consensus 35 ~L~~~~VlivG~-GGlG~~va~~La~~Gvg~l~lvD~D~ve~sNL~RQ~l~~~~dvG~~Ka~~a~~~l~~~np~v~v~~~ 113 (390)
T PRK07411 35 RLKAASVLCIGT-GGLGSPLLLYLAAAGIGRIGIVDFDVVDSSNLQRQVIHGTSWVGKPKIESAKNRILEINPYCQVDLY 113 (390)
T ss_pred HHhcCcEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCEecccccCcCcccChHHCCCcHHHHHHHHHHHHCCCCeEEEE
Confidence 445789999999 8899999999999996 55555433210 000 0122 34445
Q ss_pred eccCCCHHHHHHHhcCccEEEEcCCch-----hhhcccccCCC
Q 021854 148 AGDASNKKFLKTALRGVRSIICPSEGF-----ISNAGSLKGVQ 185 (306)
Q Consensus 148 ~~D~~d~~~l~~~~~~~d~vi~~~~g~-----~~~~a~~~gvk 185 (306)
...++ .+...+.+.++|+||.++..+ +.++|.+.++.
T Consensus 114 ~~~~~-~~~~~~~~~~~D~Vvd~~d~~~~r~~ln~~~~~~~~p 155 (390)
T PRK07411 114 ETRLS-SENALDILAPYDVVVDGTDNFPTRYLVNDACVLLNKP 155 (390)
T ss_pred ecccC-HHhHHHHHhCCCEEEECCCCHHHHHHHHHHHHHcCCC
Confidence 54444 356677899999999985543 34556666654
|
|
| >PRK11880 pyrroline-5-carboxylate reductase; Reviewed | Back alignment and domain information |
|---|
Probab=95.60 E-value=0.026 Score=51.09 Aligned_cols=67 Identities=9% Similarity=0.049 Sum_probs=46.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCC---CeEEEEecCcchhhhhcCC-CceeeeccCCCHHHHHHHhcCccEEEEcCC
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKR---TRIKALVKDKRNAMESFGT-YVESMAGDASNKKFLKTALRGVRSIICPSE 172 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g---~~V~~l~R~~~~~~~~~~~-~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~ 172 (306)
|+++|.|.|+ |.+|..+++.|.+.| ++|.+..|++++.+..... ++.+ . .+..++++.+|+||.+..
T Consensus 1 ~mm~I~iIG~-G~mG~~la~~l~~~g~~~~~v~v~~r~~~~~~~~~~~~g~~~-----~--~~~~~~~~~advVil~v~ 71 (267)
T PRK11880 1 MMKKIGFIGG-GNMASAIIGGLLASGVPAKDIIVSDPSPEKRAALAEEYGVRA-----A--TDNQEAAQEADVVVLAVK 71 (267)
T ss_pred CCCEEEEEec-hHHHHHHHHHHHhCCCCcceEEEEcCCHHHHHHHHHhcCCee-----c--CChHHHHhcCCEEEEEcC
Confidence 3578999998 999999999999998 7899999988764432221 2221 1 122334567888887743
|
|
| >PRK09288 purT phosphoribosylglycinamide formyltransferase 2; Validated | Back alignment and domain information |
|---|
Probab=95.59 E-value=0.066 Score=51.19 Aligned_cols=70 Identities=11% Similarity=0.116 Sum_probs=54.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhc--CccEEEEc
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--GVRSIICP 170 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~--~~d~vi~~ 170 (306)
..|+|+|+|+ |..|..+++.+.+.|++|+++..++......+.+ ..+..|..|.+.+.++.+ ++|.|+..
T Consensus 11 ~~~~ilIiG~-g~~~~~~~~a~~~~G~~v~~~~~~~~~~~~~~ad--~~~~~~~~d~~~l~~~~~~~~id~vi~~ 82 (395)
T PRK09288 11 SATRVMLLGS-GELGKEVAIEAQRLGVEVIAVDRYANAPAMQVAH--RSHVIDMLDGDALRAVIEREKPDYIVPE 82 (395)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCCchHHhhh--heEECCCCCHHHHHHHHHHhCCCEEEEe
Confidence 4579999997 7899999999999999999998877442211222 356778889888888887 78988865
|
|
| >KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=95.53 E-value=0.034 Score=51.54 Aligned_cols=95 Identities=8% Similarity=0.117 Sum_probs=66.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcC-CCceeeeccCCCHHHHHHHhcCccEEEEcCCch--
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG-TYVESMAGDASNKKFLKTALRGVRSIICPSEGF-- 174 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~-~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~g~-- 174 (306)
+++++.|+|+.| +|..-++.--+.|++|+++++...+.++.+. -+.+.+..-..|++.++++.+-.|.+++....+
T Consensus 181 pG~~vgI~GlGG-LGh~aVq~AKAMG~rV~vis~~~~kkeea~~~LGAd~fv~~~~d~d~~~~~~~~~dg~~~~v~~~a~ 259 (360)
T KOG0023|consen 181 PGKWVGIVGLGG-LGHMAVQYAKAMGMRVTVISTSSKKKEEAIKSLGADVFVDSTEDPDIMKAIMKTTDGGIDTVSNLAE 259 (360)
T ss_pred CCcEEEEecCcc-cchHHHHHHHHhCcEEEEEeCCchhHHHHHHhcCcceeEEecCCHHHHHHHHHhhcCcceeeeeccc
Confidence 789999999977 9998888888899999999999866555444 356666655558888888777667666652211
Q ss_pred -----hhhcccccCCCEEEEecCccc
Q 021854 175 -----ISNAGSLKGVQHVILLSQLSV 195 (306)
Q Consensus 175 -----~~~~a~~~gvkr~V~iSS~~~ 195 (306)
....++.. .++|+++-...
T Consensus 260 ~~~~~~~~~lk~~--Gt~V~vg~p~~ 283 (360)
T KOG0023|consen 260 HALEPLLGLLKVN--GTLVLVGLPEK 283 (360)
T ss_pred cchHHHHHHhhcC--CEEEEEeCcCC
Confidence 22233333 47888876543
|
|
| >COG0240 GpsA Glycerol-3-phosphate dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=95.51 E-value=0.039 Score=51.50 Aligned_cols=75 Identities=13% Similarity=0.087 Sum_probs=55.7
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcC--CCceeee-----ccCCCHHHHHHHhcCccEEEEcC
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG--TYVESMA-----GDASNKKFLKTALRGVRSIICPS 171 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~--~~v~~v~-----~D~~d~~~l~~~~~~~d~vi~~~ 171 (306)
.++|.|.|| |..|.+|+.-|++.|++|++-.|+++-..+... .+.+++. .++.-..++.++++++|+|+.+.
T Consensus 1 ~~kI~ViGa-GswGTALA~~la~ng~~V~lw~r~~~~~~~i~~~~~N~~yLp~i~lp~~l~at~Dl~~a~~~ad~iv~av 79 (329)
T COG0240 1 MMKIAVIGA-GSWGTALAKVLARNGHEVRLWGRDEEIVAEINETRENPKYLPGILLPPNLKATTDLAEALDGADIIVIAV 79 (329)
T ss_pred CceEEEEcC-ChHHHHHHHHHHhcCCeeEEEecCHHHHHHHHhcCcCccccCCccCCcccccccCHHHHHhcCCEEEEEC
Confidence 378999999 999999999999999999999999876443322 2333332 22222456888999999999886
Q ss_pred Cch
Q 021854 172 EGF 174 (306)
Q Consensus 172 ~g~ 174 (306)
+..
T Consensus 80 Ps~ 82 (329)
T COG0240 80 PSQ 82 (329)
T ss_pred ChH
Confidence 543
|
|
| >PRK13403 ketol-acid reductoisomerase; Provisional | Back alignment and domain information |
|---|
Probab=95.50 E-value=0.056 Score=50.51 Aligned_cols=69 Identities=12% Similarity=-0.029 Sum_probs=49.9
Q ss_pred CccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcCC
Q 021854 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE 172 (306)
Q Consensus 95 ~~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~ 172 (306)
....+++|.|.|- |.+|+++++.|...|++|++..|...........+++. .++.++++.+|+|+++.+
T Consensus 12 ~~LkgKtVGIIG~-GsIG~amA~nL~d~G~~ViV~~r~~~s~~~A~~~G~~v--------~sl~Eaak~ADVV~llLP 80 (335)
T PRK13403 12 ELLQGKTVAVIGY-GSQGHAQAQNLRDSGVEVVVGVRPGKSFEVAKADGFEV--------MSVSEAVRTAQVVQMLLP 80 (335)
T ss_pred hhhCcCEEEEEeE-cHHHHHHHHHHHHCcCEEEEEECcchhhHHHHHcCCEE--------CCHHHHHhcCCEEEEeCC
Confidence 4556899999998 99999999999999999998877533221111123322 157788899999997633
|
|
| >COG0136 Asd Aspartate-semialdehyde dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.48 E-value=0.034 Score=52.00 Aligned_cols=92 Identities=16% Similarity=0.263 Sum_probs=50.8
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEE-----EEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcCCc
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIK-----ALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG 173 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~-----~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~g 173 (306)
+++|.|.||||.+|+.+++.|..+.+.+. +..|+..+..-.+......+.-++.|.. .++++|++|.+.++
T Consensus 1 ~~~VavvGATG~VG~~~~~~L~e~~f~~~~~~~~AS~rSaG~~~~~f~~~~~~v~~~~~~~~----~~~~~Divf~~ag~ 76 (334)
T COG0136 1 KLNVAVLGATGAVGQVLLELLEERHFPFEELVLLASARSAGKKYIEFGGKSIGVPEDAADEF----VFSDVDIVFFAAGG 76 (334)
T ss_pred CcEEEEEeccchHHHHHHHHHHhcCCCcceEEEEecccccCCccccccCccccCcccccccc----ccccCCEEEEeCch
Confidence 36899999999999999999998764322 2234433321122221111222222322 24489999998665
Q ss_pred hh----hhcccccCCCEEEEecCccccc
Q 021854 174 FI----SNAGSLKGVQHVILLSQLSVYR 197 (306)
Q Consensus 174 ~~----~~~a~~~gvkr~V~iSS~~~~~ 197 (306)
-. ...+.++| ++.++..++++
T Consensus 77 ~~s~~~~p~~~~~G---~~VIdnsSa~R 101 (334)
T COG0136 77 SVSKEVEPKAAEAG---CVVIDNSSAFR 101 (334)
T ss_pred HHHHHHHHHHHHcC---CEEEeCCcccc
Confidence 42 23344455 34454444443
|
|
| >PRK07574 formate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.47 E-value=0.049 Score=52.30 Aligned_cols=68 Identities=7% Similarity=-0.016 Sum_probs=49.9
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcC
Q 021854 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS 171 (306)
Q Consensus 96 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~ 171 (306)
+..+++|.|.|. |.||+.+++.|...|++|+...|...........++ .-..+++++++.+|+|+++.
T Consensus 189 ~L~gktVGIvG~-G~IG~~vA~~l~~fG~~V~~~dr~~~~~~~~~~~g~-------~~~~~l~ell~~aDvV~l~l 256 (385)
T PRK07574 189 DLEGMTVGIVGA-GRIGLAVLRRLKPFDVKLHYTDRHRLPEEVEQELGL-------TYHVSFDSLVSVCDVVTIHC 256 (385)
T ss_pred ecCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCCCCchhhHhhcCc-------eecCCHHHHhhcCCEEEEcC
Confidence 456899999998 999999999999999999999887632111101111 11345788899999999763
|
|
| >TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase | Back alignment and domain information |
|---|
Probab=95.44 E-value=0.027 Score=51.69 Aligned_cols=63 Identities=10% Similarity=-0.023 Sum_probs=46.6
Q ss_pred eEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcC
Q 021854 101 AVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS 171 (306)
Q Consensus 101 ~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~ 171 (306)
+|.|.|. |.+|..+++.|++.|++|++..|++++.......+.. ...+..++++++|+||.+.
T Consensus 1 ~IgvIG~-G~mG~~iA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~-------~~~~~~~~~~~aDivi~~v 63 (291)
T TIGR01505 1 KVGFIGL-GIMGSPMSINLAKAGYQLHVTTIGPEVADELLAAGAV-------TAETARQVTEQADVIFTMV 63 (291)
T ss_pred CEEEEEe-cHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCc-------ccCCHHHHHhcCCEEEEec
Confidence 4788887 9999999999999999999999998775543222221 1123456778889999773
|
This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism. |
| >PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed | Back alignment and domain information |
|---|
Probab=95.44 E-value=0.027 Score=55.66 Aligned_cols=70 Identities=13% Similarity=0.063 Sum_probs=48.0
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcCC
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE 172 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~ 172 (306)
..+++++|+|+ |++|++++..|.+.|++|.+..|+.++.++.... ......++ +.+. .+.++|+||++++
T Consensus 330 ~~~k~vlIiGa-GgiG~aia~~L~~~G~~V~i~~R~~~~~~~la~~-~~~~~~~~---~~~~-~l~~~DiVInatP 399 (477)
T PRK09310 330 LNNQHVAIVGA-GGAAKAIATTLARAGAELLIFNRTKAHAEALASR-CQGKAFPL---ESLP-ELHRIDIIINCLP 399 (477)
T ss_pred cCCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH-hccceech---hHhc-ccCCCCEEEEcCC
Confidence 35689999997 8999999999999999999999988765432211 11011122 2222 2568899998844
|
|
| >PRK12921 2-dehydropantoate 2-reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.43 E-value=0.039 Score=50.75 Aligned_cols=34 Identities=15% Similarity=0.177 Sum_probs=30.7
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcch
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN 135 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~ 135 (306)
|+|+|.|+ |.+|..++..|.+.|++|.++.| .++
T Consensus 1 mkI~IiG~-G~iG~~~a~~L~~~g~~V~~~~r-~~~ 34 (305)
T PRK12921 1 MRIAVVGA-GAVGGTFGGRLLEAGRDVTFLVR-PKR 34 (305)
T ss_pred CeEEEECC-CHHHHHHHHHHHHCCCceEEEec-HHH
Confidence 57999988 99999999999999999999999 544
|
|
| >PRK06249 2-dehydropantoate 2-reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.41 E-value=0.033 Score=51.79 Aligned_cols=37 Identities=11% Similarity=0.084 Sum_probs=33.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcch
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN 135 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~ 135 (306)
..++|+|.|+ |.||..++..|.+.|++|.++.|+...
T Consensus 4 ~~m~I~IiG~-GaiG~~lA~~L~~~g~~V~~~~r~~~~ 40 (313)
T PRK06249 4 ETPRIGIIGT-GAIGGFYGAMLARAGFDVHFLLRSDYE 40 (313)
T ss_pred cCcEEEEECC-CHHHHHHHHHHHHCCCeEEEEEeCCHH
Confidence 3578999988 999999999999999999999998743
|
|
| >cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity | Back alignment and domain information |
|---|
Probab=95.38 E-value=0.027 Score=52.51 Aligned_cols=34 Identities=18% Similarity=0.250 Sum_probs=30.6
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCC--eEEEEecCc
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVKRT--RIKALVKDK 133 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~g~--~V~~l~R~~ 133 (306)
++|.|+||+|.+|..++..|+..|+ +|+++.|+.
T Consensus 1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~ 36 (309)
T cd05294 1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPK 36 (309)
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcc
Confidence 6899999999999999999999986 599999854
|
The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox |
| >PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt | Back alignment and domain information |
|---|
Probab=95.33 E-value=0.15 Score=46.05 Aligned_cols=89 Identities=18% Similarity=0.170 Sum_probs=65.4
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcch--hhhhcCCCceeeeccCCCHHHHHHHhc--CccEEEEcCCch-
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN--AMESFGTYVESMAGDASNKKFLKTALR--GVRSIICPSEGF- 174 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~--~~~~~~~~v~~v~~D~~d~~~l~~~~~--~~d~vi~~~~g~- 174 (306)
|+|||.|||+ =|+.++..|.+.|+ |++-+-..-. ........+.+..+-+.|.+.+...++ +++.||-++-.|
T Consensus 1 m~ILvlgGTt-E~r~la~~L~~~g~-v~~sv~t~~g~~~~~~~~~~~~v~~G~lg~~~~l~~~l~~~~i~~vIDATHPfA 78 (249)
T PF02571_consen 1 MKILVLGGTT-EGRKLAERLAEAGY-VIVSVATSYGGELLKPELPGLEVRVGRLGDEEGLAEFLRENGIDAVIDATHPFA 78 (249)
T ss_pred CEEEEEechH-HHHHHHHHHHhcCC-EEEEEEhhhhHhhhccccCCceEEECCCCCHHHHHHHHHhCCCcEEEECCCchH
Confidence 7899999987 69999999999998 6554433322 211122357888888889999999985 789999875544
Q ss_pred ------hhhcccccCCCEEEEe
Q 021854 175 ------ISNAGSLKGVQHVILL 190 (306)
Q Consensus 175 ------~~~~a~~~gvkr~V~i 190 (306)
..++|++.|+..+-|-
T Consensus 79 ~~is~na~~a~~~~~ipylR~e 100 (249)
T PF02571_consen 79 AEISQNAIEACRELGIPYLRFE 100 (249)
T ss_pred HHHHHHHHHHHhhcCcceEEEE
Confidence 5567788888766655
|
Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process |
| >PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=95.32 E-value=0.056 Score=49.73 Aligned_cols=55 Identities=13% Similarity=0.153 Sum_probs=43.8
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcC
Q 021854 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS 171 (306)
Q Consensus 96 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~ 171 (306)
...+++|+|.|++|.+|+.++..|+.+|.+|+++.|.. ..+.+.++++|+||.++
T Consensus 156 ~l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~t---------------------~~L~~~~~~aDIvI~At 210 (283)
T PRK14192 156 ELAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSRT---------------------QNLPELVKQADIIVGAV 210 (283)
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCCc---------------------hhHHHHhccCCEEEEcc
Confidence 45689999999988899999999999999988887632 12344457888888874
|
|
| >cd08230 glucose_DH Glucose dehydrogenase | Back alignment and domain information |
|---|
Probab=95.29 E-value=0.14 Score=48.08 Aligned_cols=94 Identities=16% Similarity=0.031 Sum_probs=55.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecC---cchhhhhcCCCceeeeccCCCHHHH-HHHhcCccEEEEcCCc
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKD---KRNAMESFGTYVESMAGDASNKKFL-KTALRGVRSIICPSEG 173 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~---~~~~~~~~~~~v~~v~~D~~d~~~l-~~~~~~~d~vi~~~~g 173 (306)
.+.+|+|+|+ |.+|...++.+...|++|+++.|+ +++......-+...+ |..+.+.. .....++|+||-++++
T Consensus 172 ~g~~vlI~G~-G~vG~~a~q~ak~~G~~vi~~~~~~~~~~~~~~~~~~Ga~~v--~~~~~~~~~~~~~~~~d~vid~~g~ 248 (355)
T cd08230 172 NPRRALVLGA-GPIGLLAALLLRLRGFEVYVLNRRDPPDPKADIVEELGATYV--NSSKTPVAEVKLVGEFDLIIEATGV 248 (355)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEe--cCCccchhhhhhcCCCCEEEECcCC
Confidence 5789999986 999999998887889999999883 444221111233332 33321110 1223578999988553
Q ss_pred h--hhhcccc-cCCCEEEEecCcc
Q 021854 174 F--ISNAGSL-KGVQHVILLSQLS 194 (306)
Q Consensus 174 ~--~~~~a~~-~gvkr~V~iSS~~ 194 (306)
. +..+.+. ..-.+++.++...
T Consensus 249 ~~~~~~~~~~l~~~G~~v~~G~~~ 272 (355)
T cd08230 249 PPLAFEALPALAPNGVVILFGVPG 272 (355)
T ss_pred HHHHHHHHHHccCCcEEEEEecCC
Confidence 2 2222211 1224687776543
|
Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai |
| >PRK15461 NADH-dependent gamma-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.28 E-value=0.044 Score=50.59 Aligned_cols=63 Identities=10% Similarity=0.064 Sum_probs=44.7
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEc
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~ 170 (306)
++|.|.|. |.+|..+++.|++.|++|.+..|++++.......++. ...+..++++++|+||.+
T Consensus 2 ~~Ig~IGl-G~mG~~mA~~l~~~G~~V~v~d~~~~~~~~~~~~g~~-------~~~s~~~~~~~aDvVi~~ 64 (296)
T PRK15461 2 AAIAFIGL-GQMGSPMASNLLKQGHQLQVFDVNPQAVDALVDKGAT-------PAASPAQAAAGAEFVITM 64 (296)
T ss_pred CeEEEEee-CHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHcCCc-------ccCCHHHHHhcCCEEEEe
Confidence 47999987 9999999999999999999999998875443222211 111233455667777765
|
|
| >cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase | Back alignment and domain information |
|---|
Probab=95.26 E-value=0.082 Score=43.46 Aligned_cols=56 Identities=13% Similarity=0.067 Sum_probs=45.8
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcCC
Q 021854 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE 172 (306)
Q Consensus 96 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~ 172 (306)
...+++|+|.|.+.-+|+.++..|.++|.+|....+... ++++.++.+|+|+.+++
T Consensus 25 ~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t~---------------------~l~~~v~~ADIVvsAtg 80 (140)
T cd05212 25 RLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKTI---------------------QLQSKVHDADVVVVGSP 80 (140)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCCc---------------------CHHHHHhhCCEEEEecC
Confidence 345899999999999999999999999999988754331 34567889999998833
|
NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional |
| >cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases | Back alignment and domain information |
|---|
Probab=95.25 E-value=0.058 Score=50.55 Aligned_cols=66 Identities=12% Similarity=0.021 Sum_probs=44.2
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCC-------eEEEEecCcch--hh----hhc----C--CCceeeeccCCCHHHHHH
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKRT-------RIKALVKDKRN--AM----ESF----G--TYVESMAGDASNKKFLKT 159 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g~-------~V~~l~R~~~~--~~----~~~----~--~~v~~v~~D~~d~~~l~~ 159 (306)
.++|.|+||+|.+|..++..|+..|. +++++...... +. +.. + .++++. ....+
T Consensus 2 p~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~-------~~~~~ 74 (322)
T cd01338 2 PVRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIVIT-------DDPNV 74 (322)
T ss_pred CeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceEEe-------cCcHH
Confidence 47999999999999999999998874 68888774322 11 111 0 112211 12246
Q ss_pred HhcCccEEEEcC
Q 021854 160 ALRGVRSIICPS 171 (306)
Q Consensus 160 ~~~~~d~vi~~~ 171 (306)
.++++|+||.++
T Consensus 75 ~~~daDivvita 86 (322)
T cd01338 75 AFKDADWALLVG 86 (322)
T ss_pred HhCCCCEEEEeC
Confidence 689999999873
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase | Back alignment and domain information |
|---|
Probab=95.25 E-value=0.15 Score=46.16 Aligned_cols=96 Identities=20% Similarity=0.173 Sum_probs=58.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCH---HHHHHHh--cCccEEEEcCC
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNK---KFLKTAL--RGVRSIICPSE 172 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~---~~l~~~~--~~~d~vi~~~~ 172 (306)
++.+++|+|++|.+|..+++.+...|.+|+++.++.++.......++.. ..+..+. +.+.+.. +++|.++.+.+
T Consensus 139 ~~~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g 217 (323)
T cd05276 139 AGETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKLEACRALGADV-AINYRTEDFAEEVKEATGGRGVDVILDMVG 217 (323)
T ss_pred CCCEEEEEcCcChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHcCCCE-EEeCCchhHHHHHHHHhCCCCeEEEEECCc
Confidence 5689999999999999999999999999999988876533221112221 2333332 2233333 36899998755
Q ss_pred chhhhcc-cc-cCCCEEEEecCcc
Q 021854 173 GFISNAG-SL-KGVQHVILLSQLS 194 (306)
Q Consensus 173 g~~~~~a-~~-~gvkr~V~iSS~~ 194 (306)
+.....+ .. ..-.+++.++...
T Consensus 218 ~~~~~~~~~~~~~~g~~i~~~~~~ 241 (323)
T cd05276 218 GDYLARNLRALAPDGRLVLIGLLG 241 (323)
T ss_pred hHHHHHHHHhhccCCEEEEEecCC
Confidence 4322211 11 1234677776543
|
PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding |
| >PRK12480 D-lactate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.25 E-value=0.056 Score=50.82 Aligned_cols=65 Identities=14% Similarity=0.087 Sum_probs=49.8
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcCC
Q 021854 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE 172 (306)
Q Consensus 96 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~ 172 (306)
...+++|.|.|. |.||+.+++.|...|++|++..|+++.... .++ . ..+++++++++|+|+.+.+
T Consensus 143 ~l~g~~VgIIG~-G~IG~~vA~~L~~~G~~V~~~d~~~~~~~~----~~~-----~--~~~l~ell~~aDiVil~lP 207 (330)
T PRK12480 143 PVKNMTVAIIGT-GRIGAATAKIYAGFGATITAYDAYPNKDLD----FLT-----Y--KDSVKEAIKDADIISLHVP 207 (330)
T ss_pred ccCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCChhHhhh----hhh-----c--cCCHHHHHhcCCEEEEeCC
Confidence 456789999998 999999999999999999999988754221 011 1 1357788999999997633
|
|
| >TIGR01381 E1_like_apg7 E1-like protein-activating enzyme Gsa7p/Apg7p | Back alignment and domain information |
|---|
Probab=95.24 E-value=0.068 Score=54.15 Aligned_cols=34 Identities=21% Similarity=0.116 Sum_probs=28.4
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEe
Q 021854 96 EEARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALV 130 (306)
Q Consensus 96 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~l~ 130 (306)
.....+|||.|| |++|..+++.|+..|. +++++.
T Consensus 335 kL~~~kVLIvGa-GGLGs~VA~~La~~GVg~ItlVD 369 (664)
T TIGR01381 335 RYSQLKVLLLGA-GTLGCNVARCLIGWGVRHITFVD 369 (664)
T ss_pred HHhcCeEEEECC-cHHHHHHHHHHHHcCCCeEEEEc
Confidence 445789999999 8899999999999996 555554
|
This model represents a family of eukaryotic proteins found in animals, plants, and yeasts, including Apg7p (YHR171W) from Saccharomyces cerevisiae and GSA7 from Pichia pastoris. Members are about 650 to 700 residues in length and include a central domain of about 150 residues shared with the ThiF/MoeB/HesA family of proteins. A low level of similarity to ubiquitin-activating enzyme E1 is described in a paper on peroxisome autophagy mediated by GSA7, and is the basis of the name ubiquitin activating enzyme E1-like protein. Members of the family appear to be involved in protein lipidation events analogous to ubiquitination and required for membrane fusion events during autophagy. |
| >PRK13243 glyoxylate reductase; Reviewed | Back alignment and domain information |
|---|
Probab=95.23 E-value=0.053 Score=51.05 Aligned_cols=66 Identities=15% Similarity=0.020 Sum_probs=49.5
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcC
Q 021854 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS 171 (306)
Q Consensus 96 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~ 171 (306)
+..+++|.|.|. |.||+.+++.|...|++|++..|....... ...++ ...+++++++.+|+|+++.
T Consensus 147 ~L~gktvgIiG~-G~IG~~vA~~l~~~G~~V~~~d~~~~~~~~-~~~~~--------~~~~l~ell~~aDiV~l~l 212 (333)
T PRK13243 147 DVYGKTIGIIGF-GRIGQAVARRAKGFGMRILYYSRTRKPEAE-KELGA--------EYRPLEELLRESDFVSLHV 212 (333)
T ss_pred CCCCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCCChhhH-HHcCC--------EecCHHHHHhhCCEEEEeC
Confidence 457899999999 999999999999999999999887643211 01111 1235677889999999763
|
|
| >COG2130 Putative NADP-dependent oxidoreductases [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.19 E-value=0.096 Score=48.28 Aligned_cols=104 Identities=15% Similarity=0.138 Sum_probs=66.4
Q ss_pred CccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcC-CCceeeeccCCCH---HHHHHHh-cCccEEEE
Q 021854 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG-TYVESMAGDASNK---KFLKTAL-RGVRSIIC 169 (306)
Q Consensus 95 ~~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~-~~v~~v~~D~~d~---~~l~~~~-~~~d~vi~ 169 (306)
....+.+++|++|+|.+|+.+.+--.-.|++|+.+.-.++|..-... .++. ...|+.+. +.+.++. +++|+.|-
T Consensus 147 qpk~GetvvVSaAaGaVGsvvgQiAKlkG~rVVGiaGg~eK~~~l~~~lGfD-~~idyk~~d~~~~L~~a~P~GIDvyfe 225 (340)
T COG2130 147 QPKAGETVVVSAAAGAVGSVVGQIAKLKGCRVVGIAGGAEKCDFLTEELGFD-AGIDYKAEDFAQALKEACPKGIDVYFE 225 (340)
T ss_pred CCCCCCEEEEEecccccchHHHHHHHhhCCeEEEecCCHHHHHHHHHhcCCc-eeeecCcccHHHHHHHHCCCCeEEEEE
Confidence 34458999999999999998775444578999999999988432111 1111 12344332 3333333 57899998
Q ss_pred cCCchhhhcccc-cC-CCEEEEecCcccccCC
Q 021854 170 PSEGFISNAGSL-KG-VQHVILLSQLSVYRGS 199 (306)
Q Consensus 170 ~~~g~~~~~a~~-~g-vkr~V~iSS~~~~~~~ 199 (306)
+.+|.+.+++.. .+ -.|+++..-.+.|+.+
T Consensus 226 NVGg~v~DAv~~~ln~~aRi~~CG~IS~YN~~ 257 (340)
T COG2130 226 NVGGEVLDAVLPLLNLFARIPVCGAISQYNAP 257 (340)
T ss_pred cCCchHHHHHHHhhccccceeeeeehhhcCCC
Confidence 888877776532 12 2367776666666644
|
|
| >PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1 | Back alignment and domain information |
|---|
Probab=95.17 E-value=0.047 Score=44.74 Aligned_cols=68 Identities=9% Similarity=0.052 Sum_probs=44.7
Q ss_pred EEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCcee----------eeccCCCHHHHHHHhcCccEEEEcC
Q 021854 102 VLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVES----------MAGDASNKKFLKTALRGVRSIICPS 171 (306)
Q Consensus 102 ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~----------v~~D~~d~~~l~~~~~~~d~vi~~~ 171 (306)
|+|.|+ |.||..++..|.+.|++|.++.|.. ..+.....++.+ ......+. ....+.+|.||.++
T Consensus 1 I~I~G~-GaiG~~~a~~L~~~g~~V~l~~r~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~---~~~~~~~D~viv~v 75 (151)
T PF02558_consen 1 ILIIGA-GAIGSLYAARLAQAGHDVTLVSRSP-RLEAIKEQGLTITGPDGDETVQPPIVISAP---SADAGPYDLVIVAV 75 (151)
T ss_dssp EEEEST-SHHHHHHHHHHHHTTCEEEEEESHH-HHHHHHHHCEEEEETTEEEEEEEEEEESSH---GHHHSTESEEEE-S
T ss_pred CEEECc-CHHHHHHHHHHHHCCCceEEEEccc-cHHhhhheeEEEEecccceecccccccCcc---hhccCCCcEEEEEe
Confidence 789998 9999999999999999999999998 433211111111 11222222 34467789999885
Q ss_pred Cch
Q 021854 172 EGF 174 (306)
Q Consensus 172 ~g~ 174 (306)
-.+
T Consensus 76 Ka~ 78 (151)
T PF02558_consen 76 KAY 78 (151)
T ss_dssp SGG
T ss_pred ccc
Confidence 443
|
1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B .... |
| >PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=95.17 E-value=0.019 Score=52.78 Aligned_cols=37 Identities=8% Similarity=0.126 Sum_probs=33.7
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhh
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM 137 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~ 137 (306)
++|.|.|+ |.+|..++..|++.|++|+++.++++..+
T Consensus 2 ~~V~VIG~-G~mG~~iA~~la~~G~~V~~~d~~~~~~~ 38 (288)
T PRK09260 2 EKLVVVGA-GVMGRGIAYVFAVSGFQTTLVDIKQEQLE 38 (288)
T ss_pred cEEEEECc-cHHHHHHHHHHHhCCCcEEEEeCCHHHHH
Confidence 57999999 99999999999999999999999987643
|
|
| >cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members | Back alignment and domain information |
|---|
Probab=95.16 E-value=0.15 Score=47.02 Aligned_cols=97 Identities=14% Similarity=0.107 Sum_probs=59.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCH---HHHHHHh-cCccEEEEcCCc
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNK---KFLKTAL-RGVRSIICPSEG 173 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~---~~l~~~~-~~~d~vi~~~~g 173 (306)
++.+++|.||+|.+|..+++.+...|.+|++++++.++......-++..+ .+..+. ..+.... +++|.++.+.++
T Consensus 139 ~~~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~v-~~~~~~~~~~~~~~~~~~~vd~v~~~~g~ 217 (329)
T cd08250 139 SGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAEFLKSLGCDRP-INYKTEDLGEVLKKEYPKGVDVVYESVGG 217 (329)
T ss_pred CCCEEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcHHHHHHHHHcCCceE-EeCCCccHHHHHHHhcCCCCeEEEECCcH
Confidence 46899999999999999998888899999999988765332211122222 222221 1222221 468999987554
Q ss_pred hhhh-cccc-cCCCEEEEecCccc
Q 021854 174 FISN-AGSL-KGVQHVILLSQLSV 195 (306)
Q Consensus 174 ~~~~-~a~~-~gvkr~V~iSS~~~ 195 (306)
.... ..+. ..-.++|.+++...
T Consensus 218 ~~~~~~~~~l~~~g~~v~~g~~~~ 241 (329)
T cd08250 218 EMFDTCVDNLALKGRLIVIGFISG 241 (329)
T ss_pred HHHHHHHHHhccCCeEEEEecccC
Confidence 3222 2211 23457888876543
|
Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. |
| >cd05288 PGDH Prostaglandin dehydrogenases | Back alignment and domain information |
|---|
Probab=95.14 E-value=0.16 Score=46.80 Aligned_cols=96 Identities=17% Similarity=0.140 Sum_probs=58.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcC-CCceeeeccCCCHH---HHHHHh-cCccEEEEcCC
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG-TYVESMAGDASNKK---FLKTAL-RGVRSIICPSE 172 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~-~~v~~v~~D~~d~~---~l~~~~-~~~d~vi~~~~ 172 (306)
.+.+|+|.|++|.+|..+++.+.+.|.+|+++.++.++...... -++.. ..|..+.+ .+.+.. .++|+++.+.+
T Consensus 145 ~~~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~v~~~~~~~~d~vi~~~g 223 (329)
T cd05288 145 PGETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWLVEELGFDA-AINYKTPDLAEALKEAAPDGIDVYFDNVG 223 (329)
T ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhhcCCce-EEecCChhHHHHHHHhccCCceEEEEcch
Confidence 46899999999999999999999999999999888766332211 11211 12223322 222222 46899998755
Q ss_pred chhhhc-ccc-cCCCEEEEecCcc
Q 021854 173 GFISNA-GSL-KGVQHVILLSQLS 194 (306)
Q Consensus 173 g~~~~~-a~~-~gvkr~V~iSS~~ 194 (306)
+...+. ... ..-.+||.++...
T Consensus 224 ~~~~~~~~~~l~~~G~~v~~g~~~ 247 (329)
T cd05288 224 GEILDAALTLLNKGGRIALCGAIS 247 (329)
T ss_pred HHHHHHHHHhcCCCceEEEEeecc
Confidence 443222 111 2234788776543
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino |
| >COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.13 E-value=0.059 Score=50.56 Aligned_cols=66 Identities=14% Similarity=0.026 Sum_probs=49.8
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEc
Q 021854 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (306)
Q Consensus 96 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~ 170 (306)
+..+|++.|.|. |.||+.+++.|...|++|++.++-..+..... -...-.++++++++.+|+|++.
T Consensus 139 el~gkTvGIiG~-G~IG~~va~~l~afgm~v~~~d~~~~~~~~~~--------~~~~~~~~Ld~lL~~sDiv~lh 204 (324)
T COG0111 139 ELAGKTVGIIGL-GRIGRAVAKRLKAFGMKVIGYDPYSPRERAGV--------DGVVGVDSLDELLAEADILTLH 204 (324)
T ss_pred cccCCEEEEECC-CHHHHHHHHHHHhCCCeEEEECCCCchhhhcc--------ccceecccHHHHHhhCCEEEEc
Confidence 556899999998 99999999999999999999988333211110 0122245688999999999965
|
|
| >PRK07417 arogenate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=95.12 E-value=0.047 Score=49.93 Aligned_cols=66 Identities=9% Similarity=0.065 Sum_probs=46.1
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcCC
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE 172 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~ 172 (306)
++|.|.|. |.+|..++..|.+.|++|.++.|+++........+. +.....+. +.++++|+||.+.+
T Consensus 1 m~I~IIG~-G~mG~sla~~L~~~g~~V~~~d~~~~~~~~a~~~g~--~~~~~~~~----~~~~~aDlVilavp 66 (279)
T PRK07417 1 MKIGIVGL-GLIGGSLGLDLRSLGHTVYGVSRRESTCERAIERGL--VDEASTDL----SLLKDCDLVILALP 66 (279)
T ss_pred CeEEEEee-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCC--cccccCCH----hHhcCCCEEEEcCC
Confidence 47999985 999999999999999999999998876443322211 00001121 24678999998854
|
|
| >PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=95.11 E-value=0.091 Score=48.34 Aligned_cols=55 Identities=18% Similarity=0.201 Sum_probs=46.4
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcC
Q 021854 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS 171 (306)
Q Consensus 96 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~ 171 (306)
...+++|+|+|+++-+|+.++..|..+|++|+.+.+.. ..+.+.++.+|+||.+.
T Consensus 155 ~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t---------------------~~l~~~~~~ADIVIsAv 209 (286)
T PRK14175 155 DLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRS---------------------KDMASYLKDADVIVSAV 209 (286)
T ss_pred CCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCc---------------------hhHHHHHhhCCEEEECC
Confidence 45689999999999999999999999999999886532 24667788999999883
|
|
| >PRK06444 prephenate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.10 E-value=0.045 Score=47.65 Aligned_cols=28 Identities=7% Similarity=0.075 Sum_probs=26.2
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEE
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVKRTRIK 127 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~g~~V~ 127 (306)
++|.|.||+|.+|+.+++.|.+.|+.|.
T Consensus 1 ~~~~iiG~~G~mG~~~~~~~~~~g~~v~ 28 (197)
T PRK06444 1 MMEIIIGKNGRLGRVLCSILDDNGLGVY 28 (197)
T ss_pred CEEEEEecCCcHHHHHHHHHHhCCCEEE
Confidence 5899999999999999999999999985
|
|
| >COG0026 PurK Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.09 E-value=0.095 Score=49.50 Aligned_cols=67 Identities=13% Similarity=0.165 Sum_probs=54.3
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEE
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSII 168 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi 168 (306)
+++|.|.|+ |.+|+.++..-...|++|+++.-+++.-..... -.++..++.|.+.++++.+.+|+|=
T Consensus 1 ~~tvgIlGG-GQLgrMm~~aa~~lG~~v~vLdp~~~~PA~~va--~~~i~~~~dD~~al~ela~~~DViT 67 (375)
T COG0026 1 MKTVGILGG-GQLGRMMALAAARLGIKVIVLDPDADAPAAQVA--DRVIVAAYDDPEALRELAAKCDVIT 67 (375)
T ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCEEEEecCCCCCchhhcc--cceeecCCCCHHHHHHHHhhCCEEE
Confidence 478999999 999999999999999999999776654322222 2566778889999999999999884
|
|
| >PRK07502 cyclohexadienyl dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=95.08 E-value=0.085 Score=48.88 Aligned_cols=69 Identities=12% Similarity=0.009 Sum_probs=47.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCC--eEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcCC
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRT--RIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE 172 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~--~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~ 172 (306)
+.++|+|.|+ |.+|..+++.|.+.|+ +|.++.|++++.......++... .. .+..++++++|+||.+.+
T Consensus 5 ~~~~I~IIG~-G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a~~~g~~~~---~~--~~~~~~~~~aDvViiavp 75 (307)
T PRK07502 5 LFDRVALIGI-GLIGSSLARAIRRLGLAGEIVGADRSAETRARARELGLGDR---VT--TSAAEAVKGADLVILCVP 75 (307)
T ss_pred CCcEEEEEee-CHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHhCCCCce---ec--CCHHHHhcCCCEEEECCC
Confidence 3578999995 9999999999999985 89999998866433222121100 11 123456788999998854
|
|
| >PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=95.07 E-value=0.041 Score=50.67 Aligned_cols=37 Identities=11% Similarity=0.024 Sum_probs=33.9
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchh
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA 136 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~ 136 (306)
.++|.|.|+ |.+|..++..|+..|++|+++.++++.+
T Consensus 5 ~~~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~~ 41 (286)
T PRK07819 5 IQRVGVVGA-GQMGAGIAEVCARAGVDVLVFETTEELA 41 (286)
T ss_pred ccEEEEEcc-cHHHHHHHHHHHhCCCEEEEEECCHHHH
Confidence 358999999 9999999999999999999999999864
|
|
| >PRK00066 ldh L-lactate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=95.07 E-value=0.091 Score=49.09 Aligned_cols=65 Identities=9% Similarity=0.164 Sum_probs=46.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCC--eEEEEecCcchhhhh-------cC--CCceeeeccCCCHHHHHHHhcCccE
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRT--RIKALVKDKRNAMES-------FG--TYVESMAGDASNKKFLKTALRGVRS 166 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~--~V~~l~R~~~~~~~~-------~~--~~v~~v~~D~~d~~~l~~~~~~~d~ 166 (306)
.+++|.|+|| |.+|..++..|+..|. ++.++.++.+++... .+ .++.+.. .++ +.++++|+
T Consensus 5 ~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~~---~~~----~~~~~adi 76 (315)
T PRK00066 5 QHNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIYA---GDY----SDCKDADL 76 (315)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEEe---CCH----HHhCCCCE
Confidence 4679999998 9999999999999886 788888877653211 11 1222221 232 34889999
Q ss_pred EEEc
Q 021854 167 IICP 170 (306)
Q Consensus 167 vi~~ 170 (306)
||.+
T Consensus 77 vIit 80 (315)
T PRK00066 77 VVIT 80 (315)
T ss_pred EEEe
Confidence 9987
|
|
| >TIGR01745 asd_gamma aspartate-semialdehyde dehydrogenase, gamma-proteobacterial | Back alignment and domain information |
|---|
Probab=95.06 E-value=0.09 Score=50.00 Aligned_cols=81 Identities=20% Similarity=0.135 Sum_probs=47.5
Q ss_pred CeEEEEcCCChHHHHHHHHHH-HCCCe---EEEEecCcc-hhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcCCch
Q 021854 100 DAVLVTDGDSDIGQMVILSLI-VKRTR---IKALVKDKR-NAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEGF 174 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~-~~g~~---V~~l~R~~~-~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~g~ 174 (306)
++|.|.||||.+|+.+++.|. ++.+. +++++...+ +..-.+. +.+...-++.+. ..+.++|++|.++++.
T Consensus 1 ~~VavvGATG~VG~~ll~~L~~e~~fp~~~~~~~ss~~s~g~~~~f~-~~~~~v~~~~~~----~~~~~vDivffa~g~~ 75 (366)
T TIGR01745 1 KNVGLVGWRGMVGSVLMQRMQEERDFDAIRPVFFSTSQLGQAAPSFG-GTTGTLQDAFDI----DALKALDIIITCQGGD 75 (366)
T ss_pred CeEEEEcCcCHHHHHHHHHHHhCCCCccccEEEEEchhhCCCcCCCC-CCcceEEcCccc----ccccCCCEEEEcCCHH
Confidence 479999999999999999999 55654 334333221 1111121 122233344332 2467899999986543
Q ss_pred ----hhhcccccCCC
Q 021854 175 ----ISNAGSLKGVQ 185 (306)
Q Consensus 175 ----~~~~a~~~gvk 185 (306)
+...+.++|..
T Consensus 76 ~s~~~~p~~~~aG~~ 90 (366)
T TIGR01745 76 YTNEIYPKLRESGWQ 90 (366)
T ss_pred HHHHHHHHHHhCCCC
Confidence 33445566654
|
|
| >PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1 | Back alignment and domain information |
|---|
Probab=95.05 E-value=0.05 Score=45.89 Aligned_cols=72 Identities=10% Similarity=-0.062 Sum_probs=48.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccC------------------C-CHHHHH
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDA------------------S-NKKFLK 158 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~------------------~-d~~~l~ 158 (306)
...+|+|+|+ |.+|...++.+...|++|+.+.................+..+. . ....+.
T Consensus 19 ~p~~vvv~G~-G~vg~gA~~~~~~lGa~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~ 97 (168)
T PF01262_consen 19 PPAKVVVTGA-GRVGQGAAEIAKGLGAEVVVPDERPERLRQLESLGAYFIEVDYEDHLERKDFDKADYYEHPESYESNFA 97 (168)
T ss_dssp -T-EEEEEST-SHHHHHHHHHHHHTT-EEEEEESSHHHHHHHHHTTTEESEETTTTTTTSB-CCHHHCHHHCCHHHHHHH
T ss_pred CCeEEEEECC-CHHHHHHHHHHhHCCCEEEeccCCHHHHHhhhcccCceEEEcccccccccccchhhhhHHHHHhHHHHH
Confidence 4689999997 9999999999999999999998887664433223333343331 1 234566
Q ss_pred HHhcCccEEEEc
Q 021854 159 TALRGVRSIICP 170 (306)
Q Consensus 159 ~~~~~~d~vi~~ 170 (306)
+.+..+|.||.+
T Consensus 98 ~~i~~~d~vI~~ 109 (168)
T PF01262_consen 98 EFIAPADIVIGN 109 (168)
T ss_dssp HHHHH-SEEEEH
T ss_pred HHHhhCcEEeee
Confidence 777888999965
|
4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A .... |
| >PLN02948 phosphoribosylaminoimidazole carboxylase | Back alignment and domain information |
|---|
Probab=95.05 E-value=0.19 Score=50.94 Aligned_cols=72 Identities=13% Similarity=0.170 Sum_probs=55.9
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEc
Q 021854 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (306)
Q Consensus 96 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~ 170 (306)
..++++|+|.|+ |.+|+.+++.+.+.|++|+++..++......+.+ +.+..++.|.+.+.++.+.+|++...
T Consensus 19 ~~~~k~IgIIGg-Gqlg~mla~aA~~lG~~Vi~ld~~~~apa~~~AD--~~~v~~~~D~~~l~~~a~~~dvIt~e 90 (577)
T PLN02948 19 GVSETVVGVLGG-GQLGRMLCQAASQMGIKVKVLDPLEDCPASSVAA--RHVVGSFDDRAAVREFAKRCDVLTVE 90 (577)
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhCc--eeeeCCCCCHHHHHHHHHHCCEEEEe
Confidence 356799999999 8999999999999999999998776432212222 35568899999998888888887543
|
|
| >PRK08229 2-dehydropantoate 2-reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.05 E-value=0.044 Score=51.36 Aligned_cols=36 Identities=11% Similarity=0.086 Sum_probs=32.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcc
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR 134 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~ 134 (306)
|+++|.|.|+ |.+|..++..|++.|++|.++.|+..
T Consensus 1 ~~mkI~IiG~-G~mG~~~A~~L~~~G~~V~~~~r~~~ 36 (341)
T PRK08229 1 MMARICVLGA-GSIGCYLGGRLAAAGADVTLIGRARI 36 (341)
T ss_pred CCceEEEECC-CHHHHHHHHHHHhcCCcEEEEecHHH
Confidence 4578999988 99999999999999999999999753
|
|
| >PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.05 E-value=0.04 Score=53.44 Aligned_cols=39 Identities=8% Similarity=0.072 Sum_probs=35.4
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhh
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME 138 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~ 138 (306)
.++|.|.|. |.+|..++..|+++|++|+++.+++++.+.
T Consensus 3 ~~kI~VIGl-G~~G~~~A~~La~~G~~V~~~D~~~~~v~~ 41 (415)
T PRK11064 3 FETISVIGL-GYIGLPTAAAFASRQKQVIGVDINQHAVDT 41 (415)
T ss_pred ccEEEEECc-chhhHHHHHHHHhCCCEEEEEeCCHHHHHH
Confidence 478999988 999999999999999999999999988654
|
|
| >PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional | Back alignment and domain information |
|---|
Probab=95.04 E-value=0.1 Score=51.30 Aligned_cols=170 Identities=11% Similarity=0.119 Sum_probs=89.5
Q ss_pred cCCCeEEEEcC----------------CChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHH
Q 021854 97 EARDAVLVTDG----------------DSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA 160 (306)
Q Consensus 97 ~~~~~ilVtGa----------------tG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~ 160 (306)
..+++||||+| ||..|.+|++.+..+|++|++++-... . ..+.+++++.. ...+++.++
T Consensus 254 l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~Gp~~-~--~~p~~v~~i~V--~ta~eM~~a 328 (475)
T PRK13982 254 LAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLISGPVD-L--ADPQGVKVIHV--ESARQMLAA 328 (475)
T ss_pred cCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEEEEeCCcC-C--CCCCCceEEEe--cCHHHHHHH
Confidence 35788888876 788999999999999999999974332 1 13456776654 344444444
Q ss_pred hc---CccEEEEcCC--chhhhcccccCCCE-------EEEecC------cccccCC--CCcccccchHHHHHHHHHHHH
Q 021854 161 LR---GVRSIICPSE--GFISNAGSLKGVQH-------VILLSQ------LSVYRGS--GGIQALMKGNARKLAEQDESM 220 (306)
Q Consensus 161 ~~---~~d~vi~~~~--g~~~~~a~~~gvkr-------~V~iSS------~~~~~~~--~~~~~~~~~~a~~~~~~aE~~ 220 (306)
+. ..|++|++++ .+........++|+ +-+.-. .+..... .-.-.|.. ........+..-
T Consensus 329 v~~~~~~Di~I~aAAVaDyrp~~~~~~KiKk~~~~~~~L~L~~nPDIL~~l~~~~~~~~~~lVGFaa-Et~~l~~~A~~K 407 (475)
T PRK13982 329 VEAALPADIAIFAAAVADWRVATEGGQKLKKGAAGPPPLQLVENPDILATISKLAENRPPLVIGFAA-ETEHLIDNARAK 407 (475)
T ss_pred HHhhCCCCEEEEeccccceeeccccccccCcCCCCCceeeeeeCcHHHHHHhhhcccCCCEEEEEcc-CchhHHHHHHHH
Confidence 42 2699998732 33221111112211 111111 1100000 00111211 111233455566
Q ss_pred HHhcCCCEEEEEcCccc-CCCC--CCcceeee-cCC----CCccccCHHHHHHHHHHHhh
Q 021854 221 LMASGIPYTIIRTGVLQ-NTPG--GKQGFQFE-EGC----AANGSLSKEDAAFICVEALE 272 (306)
Q Consensus 221 l~~sgi~~tiiRPg~l~-~~~~--~~~~~~~~-~g~----~~~~~Is~~DVA~~iv~aL~ 272 (306)
|...++++++.+.-... ...+ .+....+. .|. ...+..+.+++|+.++..+.
T Consensus 408 L~~K~~D~IvaN~v~~~~~gfg~d~n~v~ii~~~g~~~~~~~~~~~sK~~iA~~Il~~i~ 467 (475)
T PRK13982 408 LARKGCDWIVANDVSPATGVMGGDRNTVHLLSRDGDAEKVESWPVMTKDEVATALVARIA 467 (475)
T ss_pred HHHcCCCEEEEccCCcCCCCcCCCccEEEEEECCCCccceeEcCCCCHHHHHHHHHHHHH
Confidence 77899999988753211 1111 12222232 221 13455688999999998773
|
|
| >cd08244 MDR_enoyl_red Possible enoyl reductase | Back alignment and domain information |
|---|
Probab=95.04 E-value=0.18 Score=46.17 Aligned_cols=95 Identities=16% Similarity=0.147 Sum_probs=59.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCH---HHHHHHh--cCccEEEEcCC
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNK---KFLKTAL--RGVRSIICPSE 172 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~---~~l~~~~--~~~d~vi~~~~ 172 (306)
.+.+|+|+|++|.+|..+++.+...|.+|+.++++.++.......++..+ .|..+. +.+.+.. +++|.++.+.+
T Consensus 142 ~~~~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~d~vl~~~g 220 (324)
T cd08244 142 PGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTALVRALGADVA-VDYTRPDWPDQVREALGGGGVTVVLDGVG 220 (324)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEE-EecCCccHHHHHHHHcCCCCceEEEECCC
Confidence 46899999999999999999999999999999988766432211122222 233332 2333334 35899998754
Q ss_pred chhhhcc-cc-cCCCEEEEecCc
Q 021854 173 GFISNAG-SL-KGVQHVILLSQL 193 (306)
Q Consensus 173 g~~~~~a-~~-~gvkr~V~iSS~ 193 (306)
+.....+ +. ..-.++|.++..
T Consensus 221 ~~~~~~~~~~l~~~g~~v~~g~~ 243 (324)
T cd08244 221 GAIGRAALALLAPGGRFLTYGWA 243 (324)
T ss_pred hHhHHHHHHHhccCcEEEEEecC
Confidence 4322211 11 233578887654
|
Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr |
| >cd01486 Apg7 Apg7 is an E1-like protein, that activates two different ubiquitin-like proteins, Apg12 and Apg8, and assigns them to specific E2 enzymes, Apg10 and Apg3, respectively | Back alignment and domain information |
|---|
Probab=95.03 E-value=0.16 Score=47.00 Aligned_cols=29 Identities=17% Similarity=0.134 Sum_probs=24.3
Q ss_pred eEEEEcCCChHHHHHHHHHHHCCC-eEEEEe
Q 021854 101 AVLVTDGDSDIGQMVILSLIVKRT-RIKALV 130 (306)
Q Consensus 101 ~ilVtGatG~iG~~l~~~L~~~g~-~V~~l~ 130 (306)
+|+|.|+ |++|.++++.|+..|. +++++.
T Consensus 1 kVLIvGa-GGLGs~vA~~La~aGVg~ItlvD 30 (307)
T cd01486 1 KCLLLGA-GTLGCNVARNLLGWGVRHITFVD 30 (307)
T ss_pred CEEEECC-CHHHHHHHHHHHHcCCCeEEEEC
Confidence 5899999 8899999999999996 555543
|
This leads to the covalent conjugation of Apg8 with phosphatidylethanolamine, an important step in autophagy. Autophagy is a dynamic membrane phenomenon for bulk protein degradation in the lysosome/vacuole. |
| >PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=95.03 E-value=0.072 Score=49.33 Aligned_cols=54 Identities=9% Similarity=0.117 Sum_probs=44.7
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEc
Q 021854 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (306)
Q Consensus 96 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~ 170 (306)
+..+|+|+|.|.+|.+|+.++..|+++|++|++..|... ++.++.+.+|+||.+
T Consensus 156 ~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~---------------------~l~e~~~~ADIVIsa 209 (301)
T PRK14194 156 DLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRST---------------------DAKALCRQADIVVAA 209 (301)
T ss_pred CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCC---------------------CHHHHHhcCCEEEEe
Confidence 556899999999999999999999999999999866542 345566777888876
|
|
| >PRK14851 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=95.02 E-value=0.17 Score=52.10 Aligned_cols=92 Identities=16% Similarity=0.197 Sum_probs=60.9
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEecCcc-------------------h---hhh---hcCC--Cceee
Q 021854 96 EEARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKR-------------------N---AME---SFGT--YVESM 147 (306)
Q Consensus 96 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~l~R~~~-------------------~---~~~---~~~~--~v~~v 147 (306)
.....+|+|.|+ |++|+.++..|+..|. +++++..+.= | +.+ ...+ +++.+
T Consensus 40 kL~~~~VlIvG~-GGlGs~va~~Lar~GVG~l~LvD~D~ve~sNLNRQ~~~~~~dvG~~Kv~v~~~~l~~inP~~~I~~~ 118 (679)
T PRK14851 40 RLAEAKVAIPGM-GGVGGVHLITMVRTGIGRFHIADFDQFEPVNVNRQFGARVPSFGRPKLAVMKEQALSINPFLEITPF 118 (679)
T ss_pred HHhcCeEEEECc-CHHHHHHHHHHHHhCCCeEEEEcCCEecccccccCcCcChhhCCCHHHHHHHHHHHHhCCCCeEEEE
Confidence 445789999998 8899999999999996 5555532220 0 011 1122 45566
Q ss_pred eccCCCHHHHHHHhcCccEEEEcCCc-------hhhhcccccCCCEEEEe
Q 021854 148 AGDASNKKFLKTALRGVRSIICPSEG-------FISNAGSLKGVQHVILL 190 (306)
Q Consensus 148 ~~D~~d~~~l~~~~~~~d~vi~~~~g-------~~~~~a~~~gvkr~V~i 190 (306)
...++ .+.+...++++|+||.+... .+.+.|.+.++. +|+.
T Consensus 119 ~~~i~-~~n~~~~l~~~DvVid~~D~~~~~~r~~l~~~c~~~~iP-~i~~ 166 (679)
T PRK14851 119 PAGIN-ADNMDAFLDGVDVVLDGLDFFQFEIRRTLFNMAREKGIP-VITA 166 (679)
T ss_pred ecCCC-hHHHHHHHhCCCEEEECCCCCcHHHHHHHHHHHHHCCCC-EEEe
Confidence 66664 56778899999999987442 144567777776 4443
|
|
| >PRK14852 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=95.02 E-value=0.16 Score=53.91 Aligned_cols=94 Identities=14% Similarity=0.113 Sum_probs=61.0
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEecCcc-------------------h---hh---hhcCC--Cceee
Q 021854 96 EEARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKR-------------------N---AM---ESFGT--YVESM 147 (306)
Q Consensus 96 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~l~R~~~-------------------~---~~---~~~~~--~v~~v 147 (306)
.....+|+|.|+ |++|..++..|+..|. +++++..+.= | +. ....+ +++++
T Consensus 329 kL~~srVlVvGl-GGlGs~ia~~LAraGVG~I~L~D~D~Ve~SNLNRQ~l~~~~dIG~~Kaevaa~~l~~INP~v~I~~~ 407 (989)
T PRK14852 329 RLLRSRVAIAGL-GGVGGIHLMTLARTGIGNFNLADFDAYSPVNLNRQYGASIASFGRGKLDVMTERALSVNPFLDIRSF 407 (989)
T ss_pred HHhcCcEEEECC-cHHHHHHHHHHHHcCCCeEEEEcCCEecccccccccCCChhhCCChHHHHHHHHHHHHCCCCeEEEE
Confidence 345789999998 8899999999999996 5555533221 0 00 11223 34444
Q ss_pred eccCCCHHHHHHHhcCccEEEEcCCc-------hhhhcccccCCCEEEEecC
Q 021854 148 AGDASNKKFLKTALRGVRSIICPSEG-------FISNAGSLKGVQHVILLSQ 192 (306)
Q Consensus 148 ~~D~~d~~~l~~~~~~~d~vi~~~~g-------~~~~~a~~~gvkr~V~iSS 192 (306)
...+ +.+.+.+.++++|+||.+... .+.+.|.+.+++ +|+.++
T Consensus 408 ~~~I-~~en~~~fl~~~DiVVDa~D~~~~~~rr~l~~~c~~~~IP-~I~ag~ 457 (989)
T PRK14852 408 PEGV-AAETIDAFLKDVDLLVDGIDFFALDIRRRLFNRALELGIP-VITAGP 457 (989)
T ss_pred ecCC-CHHHHHHHhhCCCEEEECCCCccHHHHHHHHHHHHHcCCC-EEEeec
Confidence 4444 557788899999999987443 244567777775 444444
|
|
| >cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2 | Back alignment and domain information |
|---|
Probab=95.00 E-value=0.19 Score=46.08 Aligned_cols=95 Identities=9% Similarity=0.137 Sum_probs=60.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCC---HHHHHHHhc--CccEEEEcCC
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASN---KKFLKTALR--GVRSIICPSE 172 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d---~~~l~~~~~--~~d~vi~~~~ 172 (306)
++.+++|.|++|.+|..+++.+...|.+|++++++.++.......+++.+. +..+ .+.+.+... ++|+++.+.+
T Consensus 139 ~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~i~~~~~~~~~d~v~d~~g 217 (324)
T cd08292 139 PGQWLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAGVAELRALGIGPVV-STEQPGWQDKVREAAGGAPISVALDSVG 217 (324)
T ss_pred CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecCHHHHHHHHhcCCCEEE-cCCCchHHHHHHHHhCCCCCcEEEECCC
Confidence 468999999999999999998889999999998888663322111232222 2232 233444443 6899998754
Q ss_pred chhhh-cccc-cCCCEEEEecCc
Q 021854 173 GFISN-AGSL-KGVQHVILLSQL 193 (306)
Q Consensus 173 g~~~~-~a~~-~gvkr~V~iSS~ 193 (306)
+.... ..+. ..-.+||.++..
T Consensus 218 ~~~~~~~~~~l~~~g~~v~~g~~ 240 (324)
T cd08292 218 GKLAGELLSLLGEGGTLVSFGSM 240 (324)
T ss_pred ChhHHHHHHhhcCCcEEEEEecC
Confidence 43222 2211 234578877643
|
2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina |
| >cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR) | Back alignment and domain information |
|---|
Probab=94.99 E-value=0.25 Score=44.87 Aligned_cols=97 Identities=13% Similarity=0.092 Sum_probs=60.1
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCC-HHHHHHHhcCccEEEEcCCchh
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASN-KKFLKTALRGVRSIICPSEGFI 175 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d-~~~l~~~~~~~d~vi~~~~g~~ 175 (306)
..+.+|+|.|++|.+|..+++.+...|.+|++++++.++......-++..+..+-.+ .+.+.+.=+++|.++.+.++..
T Consensus 141 ~~g~~vlV~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~d~vl~~~~~~~ 220 (320)
T cd08243 141 QPGDTLLIRGGTSSVGLAALKLAKALGATVTATTRSPERAALLKELGADEVVIDDGAIAEQLRAAPGGFDKVLELVGTAT 220 (320)
T ss_pred CCCCEEEEEcCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEEecCccHHHHHHHhCCCceEEEECCChHH
Confidence 346899999999999999999998999999999988866432211223333222112 2233333246899998755432
Q ss_pred h-hcccc-cCCCEEEEecCc
Q 021854 176 S-NAGSL-KGVQHVILLSQL 193 (306)
Q Consensus 176 ~-~~a~~-~gvkr~V~iSS~ 193 (306)
. +..+. ..-.+|+.++..
T Consensus 221 ~~~~~~~l~~~g~~v~~g~~ 240 (320)
T cd08243 221 LKDSLRHLRPGGIVCMTGLL 240 (320)
T ss_pred HHHHHHHhccCCEEEEEccC
Confidence 2 22221 123578877654
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. |
| >cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=94.99 E-value=0.15 Score=44.95 Aligned_cols=97 Identities=13% Similarity=0.077 Sum_probs=58.3
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHH----hcCccEEEEcCC
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA----LRGVRSIICPSE 172 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~----~~~~d~vi~~~~ 172 (306)
..+.+|+|+|+++ +|..+++.+...|.+|+++++++++........... ..|..+....... -.++|.++.+.+
T Consensus 133 ~~~~~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~d~vi~~~~ 210 (271)
T cd05188 133 KPGDTVLVLGAGG-VGLLAAQLAKAAGARVIVTDRSDEKLELAKELGADH-VIDYKEEDLEEELRLTGGGGADVVIDAVG 210 (271)
T ss_pred CCCCEEEEECCCH-HHHHHHHHHHHcCCeEEEEcCCHHHHHHHHHhCCce-eccCCcCCHHHHHHHhcCCCCCEEEECCC
Confidence 4578999999988 999999988889999999998876533221111111 1233332222221 246899998855
Q ss_pred c-hhhh-cccc-cCCCEEEEecCccc
Q 021854 173 G-FISN-AGSL-KGVQHVILLSQLSV 195 (306)
Q Consensus 173 g-~~~~-~a~~-~gvkr~V~iSS~~~ 195 (306)
+ .... .... ..-.+++.++....
T Consensus 211 ~~~~~~~~~~~l~~~G~~v~~~~~~~ 236 (271)
T cd05188 211 GPETLAQALRLLRPGGRIVVVGGTSG 236 (271)
T ss_pred CHHHHHHHHHhcccCCEEEEEccCCC
Confidence 4 2221 1111 23357888776543
|
The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro |
| >cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=94.97 E-value=0.073 Score=49.43 Aligned_cols=64 Identities=11% Similarity=0.168 Sum_probs=45.7
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCC--CeEEEEecCcchhhhhc----------CCCceeeeccCCCHHHHHHHhcCccEE
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRNAMESF----------GTYVESMAGDASNKKFLKTALRGVRSI 167 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~g--~~V~~l~R~~~~~~~~~----------~~~v~~v~~D~~d~~~l~~~~~~~d~v 167 (306)
++|.|.|+ |.+|+.++..|+..| ++|+++.|+.+++.... +..+.+.. .++ +.++++|+|
T Consensus 1 ~kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~~---~~~----~~l~~aDIV 72 (306)
T cd05291 1 RKVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIKA---GDY----SDCKDADIV 72 (306)
T ss_pred CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEEc---CCH----HHhCCCCEE
Confidence 47999997 999999999999999 58999999887643221 11222221 232 236899999
Q ss_pred EEcC
Q 021854 168 ICPS 171 (306)
Q Consensus 168 i~~~ 171 (306)
|.++
T Consensus 73 Iita 76 (306)
T cd05291 73 VITA 76 (306)
T ss_pred EEcc
Confidence 9983
|
L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine |
| >PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ] | Back alignment and domain information |
|---|
Probab=94.96 E-value=0.02 Score=49.25 Aligned_cols=38 Identities=13% Similarity=0.085 Sum_probs=30.2
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhh
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME 138 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~ 138 (306)
|+|.|.|. |++|..++..|++.|++|+++..++++...
T Consensus 1 M~I~ViGl-GyvGl~~A~~lA~~G~~V~g~D~~~~~v~~ 38 (185)
T PF03721_consen 1 MKIAVIGL-GYVGLPLAAALAEKGHQVIGVDIDEEKVEA 38 (185)
T ss_dssp -EEEEE---STTHHHHHHHHHHTTSEEEEE-S-HHHHHH
T ss_pred CEEEEECC-CcchHHHHHHHHhCCCEEEEEeCChHHHHH
Confidence 68999977 999999999999999999999999987443
|
The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D .... |
| >PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=94.92 E-value=0.082 Score=48.89 Aligned_cols=53 Identities=9% Similarity=0.141 Sum_probs=44.2
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEE-ecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEc
Q 021854 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKAL-VKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (306)
Q Consensus 96 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l-~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~ 170 (306)
...+++|+|.|-++.+|+.++..|+++|++|++. .|+. .++++.+.+|+||.+
T Consensus 155 ~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~----------------------~l~e~~~~ADIVIsa 208 (296)
T PRK14188 155 DLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTR----------------------DLPAVCRRADILVAA 208 (296)
T ss_pred CCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCC----------------------CHHHHHhcCCEEEEe
Confidence 4568999999999999999999999999999988 3543 135667788888877
|
|
| >PRK09599 6-phosphogluconate dehydrogenase-like protein; Reviewed | Back alignment and domain information |
|---|
Probab=94.92 E-value=0.098 Score=48.36 Aligned_cols=66 Identities=9% Similarity=-0.022 Sum_probs=45.5
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEc
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~ 170 (306)
++|.|.|. |.+|..+++.|++.|++|.+..|++++.......++.. ..+.+.+.+.+.+.|+||.+
T Consensus 1 m~Ig~IGl-G~MG~~mA~~L~~~g~~v~v~dr~~~~~~~~~~~g~~~----~~~~~e~~~~~~~~dvvi~~ 66 (301)
T PRK09599 1 MQLGMIGL-GRMGGNMARRLLRGGHEVVGYDRNPEAVEALAEEGATG----ADSLEELVAKLPAPRVVWLM 66 (301)
T ss_pred CEEEEEcc-cHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHCCCee----cCCHHHHHhhcCCCCEEEEE
Confidence 47899987 99999999999999999999999987754432222221 12334333333346777766
|
|
| >PRK06849 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=94.91 E-value=0.16 Score=48.54 Aligned_cols=38 Identities=11% Similarity=-0.007 Sum_probs=34.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcch
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN 135 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~ 135 (306)
++|+|||||+...+|..+++.|.+.|++|+++..++..
T Consensus 3 ~~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~~~ 40 (389)
T PRK06849 3 TKKTVLITGARAPAALELARLFHNAGHTVILADSLKYP 40 (389)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchH
Confidence 46999999999999999999999999999999887643
|
|
| >PLN03139 formate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.90 E-value=0.08 Score=50.85 Aligned_cols=70 Identities=11% Similarity=0.021 Sum_probs=50.0
Q ss_pred CccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcCC
Q 021854 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE 172 (306)
Q Consensus 95 ~~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~ 172 (306)
.+..+++|.|.|. |.||+.+++.|...|++|++..|...........++. -.++++++++.+|+|+++.+
T Consensus 195 ~~L~gktVGIVG~-G~IG~~vA~~L~afG~~V~~~d~~~~~~~~~~~~g~~-------~~~~l~ell~~sDvV~l~lP 264 (386)
T PLN03139 195 YDLEGKTVGTVGA-GRIGRLLLQRLKPFNCNLLYHDRLKMDPELEKETGAK-------FEEDLDAMLPKCDVVVINTP 264 (386)
T ss_pred cCCCCCEEEEEee-cHHHHHHHHHHHHCCCEEEEECCCCcchhhHhhcCce-------ecCCHHHHHhhCCEEEEeCC
Confidence 3567899999996 9999999999999999999888765321111111111 12357788899999997633
|
|
| >PRK06728 aspartate-semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.82 E-value=0.059 Score=50.96 Aligned_cols=88 Identities=19% Similarity=0.209 Sum_probs=49.9
Q ss_pred CCeEEEEcCCChHHHHHHHHHHH-CCCe---EEEEecCc--chhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcCC
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIV-KRTR---IKALVKDK--RNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE 172 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~-~g~~---V~~l~R~~--~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~ 172 (306)
..+|.|.||||.+|+++++.|.. ..++ +..+.... .+... +... +...-++ |.+ .+.++|++|.+.+
T Consensus 5 ~~~VaIvGATG~vG~ell~lL~~h~~f~v~~l~~~aS~~saGk~~~-~~~~-~l~v~~~-~~~----~~~~~Divf~a~~ 77 (347)
T PRK06728 5 GYHVAVVGATGAVGQKIIELLEKETKFNIAEVTLLSSKRSAGKTVQ-FKGR-EIIIQEA-KIN----SFEGVDIAFFSAG 77 (347)
T ss_pred CCEEEEEeCCCHHHHHHHHHHHHCCCCCcccEEEEECcccCCCCee-eCCc-ceEEEeC-CHH----HhcCCCEEEECCC
Confidence 47999999999999999999984 6666 54444332 22111 1111 2222222 333 2478999999854
Q ss_pred ch----hhhcccccCCCEEEEecCcc
Q 021854 173 GF----ISNAGSLKGVQHVILLSQLS 194 (306)
Q Consensus 173 g~----~~~~a~~~gvkr~V~iSS~~ 194 (306)
+- +...+.++|. .+|=.|+..
T Consensus 78 ~~~s~~~~~~~~~~G~-~VID~Ss~f 102 (347)
T PRK06728 78 GEVSRQFVNQAVSSGA-IVIDNTSEY 102 (347)
T ss_pred hHHHHHHHHHHHHCCC-EEEECchhh
Confidence 32 2222334443 355455543
|
|
| >PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=94.81 E-value=0.15 Score=49.72 Aligned_cols=67 Identities=12% Similarity=0.009 Sum_probs=45.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcch---h-hhhcCCCceeeeccCCCHHHHHHHhc-CccEEEEc
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN---A-MESFGTYVESMAGDASNKKFLKTALR-GVRSIICP 170 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~---~-~~~~~~~v~~v~~D~~d~~~l~~~~~-~~d~vi~~ 170 (306)
.+++|+|||+++ +|..+++.|++.|++|.+..++... . ......++++..++.. .. .+. ++|.||..
T Consensus 4 ~~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l~~~g~~~~~~~~~--~~---~~~~~~d~vV~s 75 (447)
T PRK02472 4 QNKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSENPEAQELLEEGIKVICGSHP--LE---LLDEDFDLMVKN 75 (447)
T ss_pred CCCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccchhHHHHHHhcCCEEEeCCCC--HH---HhcCcCCEEEEC
Confidence 468999999965 9999999999999999998766532 1 1122234555443322 11 133 48988876
|
|
| >PLN02688 pyrroline-5-carboxylate reductase | Back alignment and domain information |
|---|
Probab=94.80 E-value=0.079 Score=47.86 Aligned_cols=63 Identities=11% Similarity=0.038 Sum_probs=43.6
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCC----eEEEE-ecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEc
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVKRT----RIKAL-VKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~g~----~V~~l-~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~ 170 (306)
|+|.+.|. |.+|..+++.|++.|+ +|++. .|++++.......++... . +..++.+++|+||.+
T Consensus 1 ~kI~~IG~-G~mG~a~a~~L~~~g~~~~~~i~v~~~r~~~~~~~~~~~g~~~~----~---~~~e~~~~aDvVil~ 68 (266)
T PLN02688 1 FRVGFIGA-GKMAEAIARGLVASGVVPPSRISTADDSNPARRDVFQSLGVKTA----A---SNTEVVKSSDVIILA 68 (266)
T ss_pred CeEEEECC-cHHHHHHHHHHHHCCCCCcceEEEEeCCCHHHHHHHHHcCCEEe----C---ChHHHHhcCCEEEEE
Confidence 57999985 9999999999999998 88888 787776443322233221 1 223445677888876
|
|
| >PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=94.79 E-value=0.3 Score=47.53 Aligned_cols=118 Identities=11% Similarity=0.062 Sum_probs=63.6
Q ss_pred EEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCC---HHHHHHHhcCccEEEEcCCchhhhccc
Q 021854 104 VTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASN---KKFLKTALRGVRSIICPSEGFISNAGS 180 (306)
Q Consensus 104 VtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d---~~~l~~~~~~~d~vi~~~~g~~~~~a~ 180 (306)
|+||+|++|.++++.|...|++|++..+...+....-...+.-+..|.+. .+.+.....-++. ......
T Consensus 43 l~~~~~g~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~l~~~~~~~~~--------~l~~l~ 114 (450)
T PRK08261 43 LVGGAGRLAEALAALLAGLGYDVVANNDGGLTWAAGWGDRFGALVFDATGITDPADLKALYEFFHP--------VLRSLA 114 (450)
T ss_pred EEccCchhHHHHHHHHhhCCCeeeecCccccccccCcCCcccEEEEECCCCCCHHHHHHHHHHHHH--------HHHhcc
Confidence 77888999999999999999999998776654322222355555666654 3333322211110 011111
Q ss_pred ccCCCEEEEecCcccccCCCCcccccchHHH--HHHHHHHHHHHhcCCCEEEEEcCc
Q 021854 181 LKGVQHVILLSQLSVYRGSGGIQALMKGNAR--KLAEQDESMLMASGIPYTIIRTGV 235 (306)
Q Consensus 181 ~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~--~~~~~aE~~l~~sgi~~tiiRPg~ 235 (306)
.-.+||++++....... ..|...++. ...+.....+ ..++.+..|.|+.
T Consensus 115 --~~griv~i~s~~~~~~~---~~~~~akaal~gl~rsla~E~-~~gi~v~~i~~~~ 165 (450)
T PRK08261 115 --PCGRVVVLGRPPEAAAD---PAAAAAQRALEGFTRSLGKEL-RRGATAQLVYVAP 165 (450)
T ss_pred --CCCEEEEEccccccCCc---hHHHHHHHHHHHHHHHHHHHh-hcCCEEEEEecCC
Confidence 23589999887654221 122211111 1111111112 3578888887764
|
|
| >PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=94.79 E-value=0.036 Score=50.90 Aligned_cols=36 Identities=8% Similarity=0.083 Sum_probs=32.9
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcch
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN 135 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~ 135 (306)
.++|.|.|+ |.+|..++..|+..|++|+++.++++.
T Consensus 3 ~~kIaViGa-G~mG~~iA~~la~~G~~V~l~d~~~~~ 38 (287)
T PRK08293 3 IKNVTVAGA-GVLGSQIAFQTAFHGFDVTIYDISDEA 38 (287)
T ss_pred ccEEEEECC-CHHHHHHHHHHHhcCCeEEEEeCCHHH
Confidence 368999998 999999999999999999999998865
|
|
| >TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase | Back alignment and domain information |
|---|
Probab=94.79 E-value=0.045 Score=52.92 Aligned_cols=70 Identities=14% Similarity=0.026 Sum_probs=47.4
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceee-------------eccCCCHHHHHHHhcCccE
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESM-------------AGDASNKKFLKTALRGVRS 166 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v-------------~~D~~d~~~l~~~~~~~d~ 166 (306)
|+|.|.|. |.+|..++..|++.|++|+++.+++++..........+. .+.+.-..+..++++++|+
T Consensus 1 mkI~vIGl-G~~G~~lA~~La~~G~~V~~~d~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~g~l~~~~~~~~~~~~adv 79 (411)
T TIGR03026 1 MKIAVIGL-GYVGLPLAALLADLGHEVTGVDIDQEKVDKLNKGKSPIYEPGLDELLAKALAAGRLRATTDYEDAIRDADV 79 (411)
T ss_pred CEEEEECC-CchhHHHHHHHHhcCCeEEEEECCHHHHHHhhcCCCCCCCCCHHHHHHHhhhcCCeEEECCHHHHHhhCCE
Confidence 47999987 999999999999999999999999887543321110000 0001111234456788999
Q ss_pred EEEc
Q 021854 167 IICP 170 (306)
Q Consensus 167 vi~~ 170 (306)
||.+
T Consensus 80 vii~ 83 (411)
T TIGR03026 80 IIIC 83 (411)
T ss_pred EEEE
Confidence 9977
|
All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively. |
| >PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ] | Back alignment and domain information |
|---|
Probab=94.77 E-value=0.08 Score=38.64 Aligned_cols=34 Identities=21% Similarity=0.227 Sum_probs=31.2
Q ss_pred eEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcch
Q 021854 101 AVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN 135 (306)
Q Consensus 101 ~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~ 135 (306)
+|+|.|| |.+|-+++..|.+.|.+|+++.|.+.-
T Consensus 1 ~vvViGg-G~ig~E~A~~l~~~g~~vtli~~~~~~ 34 (80)
T PF00070_consen 1 RVVVIGG-GFIGIELAEALAELGKEVTLIERSDRL 34 (80)
T ss_dssp EEEEESS-SHHHHHHHHHHHHTTSEEEEEESSSSS
T ss_pred CEEEECc-CHHHHHHHHHHHHhCcEEEEEeccchh
Confidence 5889998 999999999999999999999998854
|
Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes a small NADH binding domain within a larger FAD binding domain described by IPR023753 from INTERPRO. It is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZKQ_A 3DGZ_A 1ZDL_A 2R9Z_B 2RAB_A 2A87_B 1M6I_A 2YVG_A 2GR1_A 2GQW_A .... |
| >TIGR01142 purT phosphoribosylglycinamide formyltransferase 2 | Back alignment and domain information |
|---|
Probab=94.74 E-value=0.14 Score=48.68 Aligned_cols=67 Identities=12% Similarity=0.118 Sum_probs=52.5
Q ss_pred eEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhc--CccEEEEc
Q 021854 101 AVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--GVRSIICP 170 (306)
Q Consensus 101 ~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~--~~d~vi~~ 170 (306)
+|+|.|+ |..|..+++.+.+.|++|+++..++......+.+ +.+..|+.|.+.+.++.+ ++|.|+..
T Consensus 1 kililG~-g~~~~~l~~aa~~~G~~v~~~d~~~~~~~~~~ad--~~~~~~~~d~~~l~~~~~~~~id~v~~~ 69 (380)
T TIGR01142 1 RVLLLGS-GELGKEVAIEAQRLGVEVIAVDRYANAPAMQVAH--RSYVINMLDGDALRAVIEREKPDYIVPE 69 (380)
T ss_pred CEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCCCCchhhhCc--eEEEcCCCCHHHHHHHHHHhCCCEEEec
Confidence 6899997 9999999999999999999998877542222322 455678889988888877 68988754
|
This enzyme is an alternative to PurN (TIGR00639) |
| >PRK08410 2-hydroxyacid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.72 E-value=0.08 Score=49.38 Aligned_cols=62 Identities=13% Similarity=-0.000 Sum_probs=48.1
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEc
Q 021854 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (306)
Q Consensus 96 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~ 170 (306)
+..++++.|.|- |.||+++++.+...|.+|++..|...... ..+ ...+++++++.+|+|++.
T Consensus 142 ~L~gktvGIiG~-G~IG~~vA~~~~~fgm~V~~~d~~~~~~~----~~~--------~~~~l~ell~~sDvv~lh 203 (311)
T PRK08410 142 EIKGKKWGIIGL-GTIGKRVAKIAQAFGAKVVYYSTSGKNKN----EEY--------ERVSLEELLKTSDIISIH 203 (311)
T ss_pred ccCCCEEEEECC-CHHHHHHHHHHhhcCCEEEEECCCccccc----cCc--------eeecHHHHhhcCCEEEEe
Confidence 567899999988 99999999999999999999887542110 111 133688899999999865
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 306 | ||||
| 1xq6_A | 253 | X-ray Structure Of Gene Product From Arabidopsis Th | 1e-04 |
| >pdb|1XQ6|A Chain A, X-ray Structure Of Gene Product From Arabidopsis Thaliana At5g02240 Length = 253 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* Length = 253 | Back alignment and structure |
|---|
Score = 78.7 bits (194), Expect = 2e-17
Identities = 54/253 (21%), Positives = 92/253 (36%), Gaps = 55/253 (21%)
Query: 102 VLVTDGDSDIGQMVILSLI--VKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKT 159
VLVT GQ+V L + K LV+ + E G + GD ++ +
Sbjct: 7 VLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGK-EKIGGEADVFIGDITDADSINP 65
Query: 160 ALRGVRSIIC-------PSEGFISNAGSLK----------------------------GV 184
A +G+ +++ GF G GV
Sbjct: 66 AFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGV 125
Query: 185 QHVILLSQLSVYRGSGGIQALMKGN---ARKLAEQDESMLMASGIPYTIIRTGVLQNTPG 241
+H++++ + + L GN ++ AEQ L SG PYTIIR G L + G
Sbjct: 126 KHIVVVGSMGGTNPDHPLNKLGNGNILVWKRKAEQ---YLADSGTPYTIIRAGGLLDKEG 182
Query: 242 GKQGFQFEEG----CAANGSLSKEDAAFICVEALESIPQTGLIFEVVNGEE----KVSDW 293
G + + ++ + D A +C++AL F++ + E D+
Sbjct: 183 GVRELLVGKDDELLQTDTKTVPRADVAEVCIQALLFEEAKNKAFDLGSKPEGTSTPTKDF 242
Query: 294 KKCFSRLMEKTGK 306
K FS++ T +
Sbjct: 243 KALFSQV---TSR 252
|
| >3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} Length = 236 | Back alignment and structure |
|---|
Score = 72.8 bits (179), Expect = 3e-15
Identities = 40/233 (17%), Positives = 79/233 (33%), Gaps = 27/233 (11%)
Query: 82 GSNEEDEEKEDEFPEEARDA--VLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES 139
GS+ VLV + + + ++ L K A+V+++ E
Sbjct: 2 GSSHHHHHHSSGRENLYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPEL 61
Query: 140 FGTYVESMAGDASNKKFLKTALRGVRSIIC-----PSEGFIS-------------NAGSL 181
+ + A + +++ P G
Sbjct: 62 RERGASDIVVANLEED-FSHAFASIDAVVFAAGSGPHTGADKTILIDLWGAIKTIQEAEK 120
Query: 182 KGVQHVILLSQLSVYRGSGGIQALMK-GNARKLAEQDESMLMASGIPYTIIRTGVLQNTP 240
+G++ I++S + G + A++LA+ L S + YTI+R G L N
Sbjct: 121 RGIKRFIMVSSVGTVDPDQGPMNMRHYLVAKRLADD---ELKRSSLDYTIVRPGPLSNEE 177
Query: 241 GGKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQT-GLIFEVVNGEEKVSD 292
+ S+++ D A + E ++ T G FEV+NG+ ++
Sbjct: 178 STGKVTVSPHFSEITRSITRHDVAKVIAELVDQ-QHTIGKTFEVLNGDTPIAK 229
|
| >3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} Length = 236 | Back alignment and structure |
|---|
Score = 72.1 bits (177), Expect = 5e-15
Identities = 34/209 (16%), Positives = 64/209 (30%), Gaps = 17/209 (8%)
Query: 82 GSNEEDEEKEDEFPEEARDA----VLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNA 136
GS+ VL+ I + VI L K+ + +
Sbjct: 2 GSSHHHHHHSSGRENLYFQGHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKI 61
Query: 137 MESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEGF--------ISNAGSLKGVQHVI 188
+ + T + + GD N LK A++G + G + A V+ +I
Sbjct: 62 HKPYPTNSQIIMGDVLNHAALKQAMQGQDIVYANLTGEDLDIQANSVIAAMKACDVKRLI 121
Query: 189 LLSQLSVYRGSGGIQALMKGNARKLAEQD----ESMLMASGIPYTIIRTGVLQNTPGGKQ 244
+ L +Y G + + ASG+ YTI+R L +
Sbjct: 122 FVLSLGIYDEVPGKFVEWNNAVIGEPLKPFRRAADAIEASGLEYTILRPAWLTDEDIIDY 181
Query: 245 GFQFEEGCAANGSLSKEDAAFICVEALES 273
+S++ A + + ++
Sbjct: 182 ELTSRNEPFKGTIVSRKSVAALITDIIDK 210
|
| >1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* Length = 206 | Back alignment and structure |
|---|
Score = 69.6 bits (171), Expect = 2e-14
Identities = 22/179 (12%), Positives = 50/179 (27%), Gaps = 18/179 (10%)
Query: 111 IGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170
G + + + LV+D + GD + + G ++I
Sbjct: 15 TGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAADVDKTVAGQDAVIV- 73
Query: 171 SEGFISNAGSLK----------------GVQHVILLSQLSVYRGSGGIQALMKGNARKLA 214
G ++ GV V+ + + + ++
Sbjct: 74 LLGTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTKVPPRLQAVTDDHI 133
Query: 215 EQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALES 273
+ +L SG+ Y + + + P +G + +SK D + L +
Sbjct: 134 RMHK-VLRESGLKYVAVMPPHIGDQPLTGAYTVTLDGRGPSRVISKHDLGHFMLRCLTT 191
|
| >3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 3r14_A* Length = 221 | Back alignment and structure |
|---|
Score = 63.9 bits (155), Expect = 3e-12
Identities = 32/209 (15%), Positives = 66/209 (31%), Gaps = 16/209 (7%)
Query: 102 VLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAMESFGT---YVESMAGDASNKKFL 157
+ + I Q + +L+ I + + + V + G N L
Sbjct: 8 ITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEIIDHERVTVIEGSFQNPGXL 67
Query: 158 KTALRGVRSIICPSEGFISNAGSL------KGVQHVILLSQLSVY-RGSGGIQALMKGNA 210
+ A+ + + S+ S+ ++ VI +S + ++ N
Sbjct: 68 EQAVTNAEVVFVGAMESGSDMASIVKALSRXNIRRVIGVSMAGLSGEFPVALEKWTFDNL 127
Query: 211 RKLAEQD----ESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCA-ANGSLSKEDAAF 265
Q ++L S + YTI+R L N P EG + +S+E
Sbjct: 128 PISYVQGERQARNVLRESNLNYTILRLTWLYNDPEXTDYELIPEGAQFNDAQVSREAVVK 187
Query: 266 ICVEALESIPQTGLIFEVVNGEEKVSDWK 294
+ L + +T + E + +
Sbjct: 188 AIFDILHAADETPFHRTSIGVGEPGTHYD 216
|
| >3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} Length = 219 | Back alignment and structure |
|---|
Score = 60.8 bits (148), Expect = 3e-11
Identities = 34/211 (16%), Positives = 70/211 (33%), Gaps = 27/211 (12%)
Query: 102 VLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDAS-NKKFLKTA 160
+ + +G+ ++ SL +I A + + V+++ D + +
Sbjct: 3 IFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQYNN--VKAVHFDVDWTPEEMAKQ 60
Query: 161 LRGVRSIIC----PSEGFIS----------NAGSLKGVQHVILLSQLSVYRGSGGIQALM 206
L G+ +II + + A V+ ILLS + + I A
Sbjct: 61 LHGMDAIINVSGSGGKSLLKVDLYGAVKLMQAAEKAEVKRFILLSTIFSLQPEKWIGAGF 120
Query: 207 KGNARKL---AEQDESMLMASGIPYTIIRTGVLQNTPG-GKQGFQFEEGCAANGSLSKED 262
D + + + YTII+ G L G + + S + D
Sbjct: 121 DALKDYYIAKHFADLYLTKETNLDYTIIQPGALTEEEATGL----IDINDEVSASNTIGD 176
Query: 263 AAFICVEALESIPQT-GLIFEVVNGEEKVSD 292
A E + + + G + + NG+ + +
Sbjct: 177 VADTIKELVMT-DHSIGKVISMHNGKTAIKE 206
|
| >3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} Length = 289 | Back alignment and structure |
|---|
Score = 56.9 bits (138), Expect = 1e-09
Identities = 24/155 (15%), Positives = 49/155 (31%), Gaps = 23/155 (14%)
Query: 102 VLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA 160
+++T +G + I V++ + + V D N++ + A
Sbjct: 3 IMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDWRGKVSVRQLDYFNQESMVEA 62
Query: 161 LRGVRS--IICPSEG-----------FISNAGSLKGVQHVILLSQLSVYRGSGGIQALMK 207
+G+ + I + A GV H+I + + + +
Sbjct: 63 FKGMDTVVFIPSIIHPSFKRIPEVENLVYAAKQ-SGVAHIIFIGYYADQHNNPFHMSPYF 121
Query: 208 GNARKLAEQDESMLMASGIPYTIIRTGV-LQNTPG 241
G A +L SGI YT +R + +
Sbjct: 122 GYA-------SRLLSTSGIDYTYVRMAMYMDPLKP 149
|
| >2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D Length = 287 | Back alignment and structure |
|---|
Score = 53.1 bits (128), Expect = 3e-08
Identities = 36/193 (18%), Positives = 62/193 (32%), Gaps = 32/193 (16%)
Query: 102 VLVTDGDSDIGQMVILSLI--VKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKT 159
+ VT +G +VI L+ V ++I A+V++ A VE GD + + L+
Sbjct: 3 IAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLADQGVEVRHGDYNQPESLQK 62
Query: 160 ALRGVRS--IICPSEG-----------FISNAGSLKGVQHVILLSQLSVYRGSGGIQALM 206
A GV I + A GV+H+ + +
Sbjct: 63 AFAGVSKLLFISGPHYDNTLLIVQHANVV-KAARDAGVKHIAYTGYAFAEESIIPLAHVH 121
Query: 207 KGNARKLAEQDESMLMASGIPYTIIRTGV-LQNTPGGKQGFQFEEG----CAANGSLS-- 259
E + + IPYT +R + E G A +G ++
Sbjct: 122 LAT--------EYAIRTTNIPYTFLRNALYTDFFVNEGLRASTESGAIVTNAGSGIVNSV 173
Query: 260 -KEDAAFICVEAL 271
+ + A L
Sbjct: 174 TRNELALAAATVL 186
|
| >2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* Length = 286 | Back alignment and structure |
|---|
Score = 53.1 bits (128), Expect = 3e-08
Identities = 38/154 (24%), Positives = 61/154 (39%), Gaps = 23/154 (14%)
Query: 102 VLVTDGDSDIGQMVILSLI--VKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKT 159
+ +T +G VI SL+ V ++I A+V++ A + D ++ L +
Sbjct: 2 IAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAAQGITVRQADYGDEAALTS 61
Query: 160 ALRGVRS--IICPSEG---------FISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKG 208
AL+GV +I SE I+ A + GV+ + S L G+
Sbjct: 62 ALQGVEKLLLISSSEVGQRAPQHRNVINAAKAA-GVKFIAYTSLLHADTSPLGLADEHIE 120
Query: 209 NARKLAEQDESMLMASGIPYTIIRTGV-LQNTPG 241
E ML SGI YT++R G +N
Sbjct: 121 T--------EKMLADSGIVYTLLRNGWYSENYLA 146
|
| >2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A Length = 299 | Back alignment and structure |
|---|
Score = 50.8 bits (122), Expect = 1e-07
Identities = 26/168 (15%), Positives = 62/168 (36%), Gaps = 21/168 (12%)
Query: 102 VLVTDGDSDIGQMVILSLI-VKRTRIKALVKD--KRNAMESFGTYVESMAGDASNKKFLK 158
V+V G G V +L+ +++ + ++ K+ A E E + GD ++ ++
Sbjct: 8 VVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRLQGAEVVQGDQDDQVIME 67
Query: 159 TALRGVRSIICPSEGF--------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQA 204
AL G + + + +++ G+ +V+ ++ + + G A
Sbjct: 68 LALNGAYATFIVTNYWESCSQEQEVKQGKLLADLARRLGLHYVVYSGLENIKKLTAGRLA 127
Query: 205 LMKGNARKLAEQDESMLMASGIPYTIIRTGV-LQNTPGGKQGFQFEEG 251
+ + E+ G+P T +R +N + +G
Sbjct: 128 AAHFDGKGEVEE---YFRDIGVPMTSVRLPCYFENLLSHFLPQKAPDG 172
|
| >2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} Length = 307 | Back alignment and structure |
|---|
Score = 42.6 bits (100), Expect = 7e-05
Identities = 26/151 (17%), Positives = 59/151 (39%), Gaps = 20/151 (13%)
Query: 102 VLVTDGDSDIGQMVILSLI---------VKRTRIKALVKDKRNAMESFGTY-VESMAGDA 151
+L+ IG+ ++ + I V++T A + K ++++ + V + GD
Sbjct: 5 ILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDI 64
Query: 152 SNKKFLKTALRGVRSIIC-------PSEGFISNAGSLKGVQHVILLSQLSV-YRGSGGIQ 203
++ + L A++ V +IC + I A G S+ + ++
Sbjct: 65 NDHETLVKAIKQVDIVICAAGRLLIEDQVKIIKAIKEAGNVKKFFPSEFGLDVDRHDAVE 124
Query: 204 ALMKGNARKLAEQDESMLMASGIPYTIIRTG 234
+ + K + + + A G+PYT +
Sbjct: 125 PVRQVFEEKASIRRV--IEAEGVPYTYLCCH 153
|
| >1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 Length = 308 | Back alignment and structure |
|---|
Score = 42.2 bits (99), Expect = 1e-04
Identities = 27/150 (18%), Positives = 47/150 (31%), Gaps = 19/150 (12%)
Query: 102 VLVTDGDSDIGQMVILSLIVKRTRIKALV--------KDKRNAMESFGTY-VESMAGDAS 152
+L+ IG+ V + + LV +K +ESF + G
Sbjct: 7 ILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSID 66
Query: 153 NKKFLKTALRGVRSIIC-------PSEGFISNAGSLKGVQHVILLSQLSV-YRGSGGIQA 204
+ L A++ V +I S+ I A G S+ ++
Sbjct: 67 DHASLVEAVKNVDVVISTVGSLQIESQVNIIKAIKEVGTVKRFFPSEFGNDVDNVHAVEP 126
Query: 205 LMKGNARKLAEQDESMLMASGIPYTIIRTG 234
K + + A GIPYT + +
Sbjct: 127 AKSVFEVKAKVRRA--IEAEGIPYTYVSSN 154
|
| >1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 Length = 313 | Back alignment and structure |
|---|
Score = 39.9 bits (93), Expect = 6e-04
Identities = 25/152 (16%), Positives = 45/152 (29%), Gaps = 19/152 (12%)
Query: 102 VLVTDGDSDIGQMVILSLIVKRTRIKALV-------KDKRNAMESFGTY-VESMAGDASN 153
VL+ G IG+ ++ + I L DK + F + + +
Sbjct: 7 VLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDD 66
Query: 154 KKFLKTALRGVRSIICPSEGFIS-----------NAGSLKGVQHVILLSQLSVYRGSGGI 202
+ L AL+ V +I G + A G L S+ +
Sbjct: 67 HQRLVDALKQVDVVISALAGGVLSHHILEQLKLVEAIKEAGNIKRFLPSEFGMDPDIMEH 126
Query: 203 QALMKGNARKLAEQDESMLMASGIPYTIIRTG 234
+ + A+ IPYT + +
Sbjct: 127 ALQPGSITFIDKRKVRRAIEAASIPYTYVSSN 158
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 306 | |||
| 3dqp_A | 219 | Oxidoreductase YLBE; alpha-beta protein., structur | 99.95 | |
| 3e8x_A | 236 | Putative NAD-dependent epimerase/dehydratase; stru | 99.95 | |
| 1xq6_A | 253 | Unknown protein; structural genomics, protein stru | 99.94 | |
| 3e48_A | 289 | Putative nucleoside-diphosphate-sugar epimerase; a | 99.94 | |
| 3qvo_A | 236 | NMRA family protein; structural genomics, PSI-biol | 99.94 | |
| 1hdo_A | 206 | Biliverdin IX beta reductase; foetal metabolism, H | 99.94 | |
| 2jl1_A | 287 | Triphenylmethane reductase; oxidoreductase, biorem | 99.94 | |
| 2zcu_A | 286 | Uncharacterized oxidoreductase YTFG; alpha-beta sa | 99.93 | |
| 2x4g_A | 342 | Nucleoside-diphosphate-sugar epimerase; isomerase; | 99.93 | |
| 3m2p_A | 311 | UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J | 99.93 | |
| 3ruf_A | 351 | WBGU; rossmann fold, UDP-hexose 4-epimerase, isome | 99.93 | |
| 3slg_A | 372 | PBGP3 protein; structural genomics, seattle struct | 99.93 | |
| 3dhn_A | 227 | NAD-dependent epimerase/dehydratase; reductase, PF | 99.93 | |
| 4id9_A | 347 | Short-chain dehydrogenase/reductase; putative dehy | 99.93 | |
| 3ius_A | 286 | Uncharacterized conserved protein; APC63810, silic | 99.93 | |
| 3r6d_A | 221 | NAD-dependent epimerase/dehydratase; structural ge | 99.93 | |
| 2wm3_A | 299 | NMRA-like family domain containing protein 1; unkn | 99.92 | |
| 3h2s_A | 224 | Putative NADH-flavin reductase; Q03B84, NESG, LCR1 | 99.92 | |
| 3ew7_A | 221 | LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend | 99.92 | |
| 3i6i_A | 346 | Putative leucoanthocyanidin reductase 1; rossmann | 99.92 | |
| 1xgk_A | 352 | Nitrogen metabolite repression regulator NMRA; ros | 99.91 | |
| 4egb_A | 346 | DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce | 99.91 | |
| 3ko8_A | 312 | NAD-dependent epimerase/dehydratase; isomerase, UD | 99.91 | |
| 2c5a_A | 379 | GDP-mannose-3', 5'-epimerase; short chain dehydrat | 99.91 | |
| 2gas_A | 307 | Isoflavone reductase; NADPH-dependent reductase, o | 99.91 | |
| 2r6j_A | 318 | Eugenol synthase 1; phenylpropene, PIP reductase, | 99.91 | |
| 1qyd_A | 313 | Pinoresinol-lariciresinol reductase; NADPH-depende | 99.91 | |
| 1sb8_A | 352 | WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN | 99.91 | |
| 1qyc_A | 308 | Phenylcoumaran benzylic ether reductase PT1; NADPH | 99.91 | |
| 3c1o_A | 321 | Eugenol synthase; phenylpropene, PIP reductase, sh | 99.9 | |
| 3gpi_A | 286 | NAD-dependent epimerase/dehydratase; structural ge | 99.9 | |
| 3ehe_A | 313 | UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, | 99.9 | |
| 3enk_A | 341 | UDP-glucose 4-epimerase; seattle structural genomi | 99.9 | |
| 2pk3_A | 321 | GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor | 99.9 | |
| 2q1s_A | 377 | Putative nucleotide sugar epimerase/ dehydratase; | 99.9 | |
| 2c20_A | 330 | UDP-glucose 4-epimerase; carbohydrate metabolism, | 99.9 | |
| 2pzm_A | 330 | Putative nucleotide sugar epimerase/ dehydratase; | 99.9 | |
| 1rkx_A | 357 | CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; | 99.9 | |
| 2bll_A | 345 | Protein YFBG; decarboxylase, short chain dehydroge | 99.9 | |
| 2yy7_A | 312 | L-threonine dehydrogenase; thermolabIle, flavobact | 99.89 | |
| 2gn4_A | 344 | FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann | 99.89 | |
| 1ek6_A | 348 | UDP-galactose 4-epimerase; short-chain dehydrogena | 99.89 | |
| 1orr_A | 347 | CDP-tyvelose-2-epimerase; rossmann fold, short-cha | 99.89 | |
| 2q1w_A | 333 | Putative nucleotide sugar epimerase/ dehydratase; | 99.89 | |
| 1r6d_A | 337 | TDP-glucose-4,6-dehydratase; rossmann fold, short- | 99.89 | |
| 2p5y_A | 311 | UDP-glucose 4-epimerase; TTHA0591, structural geno | 99.89 | |
| 1oc2_A | 348 | DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos | 99.89 | |
| 3sxp_A | 362 | ADP-L-glycero-D-mannoheptose-6-epimerase; rossman | 99.89 | |
| 1i24_A | 404 | Sulfolipid biosynthesis protein SQD1; SDR, short-c | 99.89 | |
| 2ydy_A | 315 | Methionine adenosyltransferase 2 subunit beta; oxi | 99.89 | |
| 1rpn_A | 335 | GDP-mannose 4,6-dehydratase; short-chain dehydroge | 99.88 | |
| 2hun_A | 336 | 336AA long hypothetical DTDP-glucose 4,6-dehydrat; | 99.88 | |
| 1e6u_A | 321 | GDP-fucose synthetase; epimerase/reductase, SDR, R | 99.88 | |
| 4b8w_A | 319 | GDP-L-fucose synthase; oxidoreductase; HET: NAP GD | 99.88 | |
| 3sc6_A | 287 | DTDP-4-dehydrorhamnose reductase; RFBD, structural | 99.88 | |
| 1gy8_A | 397 | UDP-galactose 4-epimerase; oxidoreductase; HET: NA | 99.88 | |
| 4f6c_A | 427 | AUSA reductase domain protein; thioester reductase | 99.87 | |
| 1y1p_A | 342 | ARII, aldehyde reductase II; rossmann fold, short | 99.87 | |
| 1kew_A | 361 | RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo | 99.87 | |
| 1vl0_A | 292 | DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s | 99.87 | |
| 1t2a_A | 375 | GDP-mannose 4,6 dehydratase; structural genomics c | 99.87 | |
| 3rft_A | 267 | Uronate dehydrogenase; apoenzyme, rossmann fold, N | 99.87 | |
| 3ajr_A | 317 | NDP-sugar epimerase; L-threonine dehydrogenase, L- | 99.86 | |
| 4dqv_A | 478 | Probable peptide synthetase NRP (peptide synthase; | 99.86 | |
| 2x6t_A | 357 | ADP-L-glycero-D-manno-heptose-6-epimerase; isomera | 99.86 | |
| 1n2s_A | 299 | DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold | 99.86 | |
| 3vps_A | 321 | TUNA, NAD-dependent epimerase/dehydratase; tunicam | 99.86 | |
| 2p4h_X | 322 | Vestitone reductase; NADPH-dependent reductase, is | 99.86 | |
| 3ay3_A | 267 | NAD-dependent epimerase/dehydratase; glucuronic ac | 99.86 | |
| 4b4o_A | 298 | Epimerase family protein SDR39U1; isomerase; HET: | 99.86 | |
| 1eq2_A | 310 | ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin | 99.86 | |
| 3st7_A | 369 | Capsular polysaccharide synthesis enzyme CAP5F; ro | 99.86 | |
| 2z1m_A | 345 | GDP-D-mannose dehydratase; short-chain dehydrogena | 99.86 | |
| 2a35_A | 215 | Hypothetical protein PA4017; alpha-beta-alpha sand | 99.86 | |
| 2rh8_A | 338 | Anthocyanidin reductase; flavonoids, rossmann fold | 99.85 | |
| 2hrz_A | 342 | AGR_C_4963P, nucleoside-diphosphate-sugar epimeras | 99.85 | |
| 3nzo_A | 399 | UDP-N-acetylglucosamine 4,6-dehydratase; structura | 99.85 | |
| 2c29_D | 337 | Dihydroflavonol 4-reductase; flavonoids, short deh | 99.85 | |
| 2v6g_A | 364 | Progesterone 5-beta-reductase; tyrosine-dependent | 99.85 | |
| 4f6l_B | 508 | AUSA reductase domain protein; thioester reductase | 99.85 | |
| 1z7e_A | 660 | Protein aRNA; rossmann fold, OB-like fold, hydrola | 99.85 | |
| 1n7h_A | 381 | GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, | 99.85 | |
| 2b69_A | 343 | UDP-glucuronate decarboxylase 1; UDP-glucoronic ac | 99.85 | |
| 1db3_A | 372 | GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya | 99.85 | |
| 1udb_A | 338 | Epimerase, UDP-galactose-4-epimerase; isomerase; H | 99.85 | |
| 2bka_A | 242 | CC3, TAT-interacting protein TIP30; NADPH, PEG600, | 99.84 | |
| 1z45_A | 699 | GAL10 bifunctional protein; epimerase, mutarotase, | 99.83 | |
| 2ggs_A | 273 | 273AA long hypothetical DTDP-4-dehydrorhamnose red | 99.83 | |
| 2bgk_A | 278 | Rhizome secoisolariciresinol dehydrogenase; oxidor | 99.82 | |
| 3oh8_A | 516 | Nucleoside-diphosphate sugar epimerase (SULA FAMI; | 99.81 | |
| 3m1a_A | 281 | Putative dehydrogenase; short, PSI, MCSG, structur | 99.81 | |
| 1spx_A | 278 | Short-chain reductase family member (5L265); paral | 99.81 | |
| 1nff_A | 260 | Putative oxidoreductase RV2002; directed evolution | 99.8 | |
| 2pnf_A | 248 | 3-oxoacyl-[acyl-carrier-protein] reductase; short | 99.8 | |
| 2cfc_A | 250 | 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor | 99.8 | |
| 2z1n_A | 260 | Dehydrogenase; reductase, SDR, oxidoreductase; 1.8 | 99.8 | |
| 1fmc_A | 255 | 7 alpha-hydroxysteroid dehydrogenase; short-chain | 99.79 | |
| 3ai3_A | 263 | NADPH-sorbose reductase; rossmann-fold, NADPH-depe | 99.79 | |
| 1hdc_A | 254 | 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi | 99.79 | |
| 1w6u_A | 302 | 2,4-dienoyl-COA reductase, mitochondrial precursor | 99.79 | |
| 2uvd_A | 246 | 3-oxoacyl-(acyl-carrier-protein) reductase; beta-k | 99.79 | |
| 4e6p_A | 259 | Probable sorbitol dehydrogenase (L-iditol 2-dehyd; | 99.78 | |
| 3gem_A | 260 | Short chain dehydrogenase; structural genomics, AP | 99.78 | |
| 2ew8_A | 249 | (S)-1-phenylethanol dehydrogenase; transferase; 2. | 99.78 | |
| 2c07_A | 285 | 3-oxoacyl-(acyl-carrier protein) reductase; oxidor | 99.78 | |
| 3tpc_A | 257 | Short chain alcohol dehydrogenase-related dehydro; | 99.78 | |
| 1iy8_A | 267 | Levodione reductase; oxidoreductase; HET: NAD; 1.6 | 99.78 | |
| 2ehd_A | 234 | Oxidoreductase, oxidoreductase, short-chain dehydr | 99.78 | |
| 1zk4_A | 251 | R-specific alcohol dehydrogenase; short chain redu | 99.78 | |
| 3f9i_A | 249 | 3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto | 99.78 | |
| 1geg_A | 256 | Acetoin reductase; SDR family, oxidoreductase; HET | 99.78 | |
| 3awd_A | 260 | GOX2181, putative polyol dehydrogenase; oxidoreduc | 99.78 | |
| 1vl8_A | 267 | Gluconate 5-dehydrogenase; TM0441, structural geno | 99.78 | |
| 2o23_A | 265 | HADH2 protein; HSD17B10, schad, ERAB, type II HADH | 99.78 | |
| 2pd6_A | 264 | Estradiol 17-beta-dehydrogenase 8; short-chain deh | 99.78 | |
| 3ak4_A | 263 | NADH-dependent quinuclidinone reductase; SDR, (R)- | 99.78 | |
| 2zat_A | 260 | Dehydrogenase/reductase SDR family member 4; alpha | 99.78 | |
| 3v2h_A | 281 | D-beta-hydroxybutyrate dehydrogenase; structural g | 99.77 | |
| 2q2v_A | 255 | Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore | 99.77 | |
| 1xq1_A | 266 | Putative tropinone reducatse; structural genomics, | 99.77 | |
| 3d3w_A | 244 | L-xylulose reductase; uronate cycle, short-chain d | 99.77 | |
| 3un1_A | 260 | Probable oxidoreductase; structural genomics, PSI- | 99.77 | |
| 2fwm_X | 250 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e | 99.77 | |
| 3imf_A | 257 | Short chain dehydrogenase; structural genomics, in | 99.77 | |
| 3dii_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 99.77 | |
| 1x1t_A | 260 | D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S | 99.77 | |
| 2dkn_A | 255 | 3-alpha-hydroxysteroid dehydrogenase; oxidoreducta | 99.77 | |
| 2hq1_A | 247 | Glucose/ribitol dehydrogenase; CTH-1438, structura | 99.77 | |
| 1uls_A | 245 | Putative 3-oxoacyl-acyl carrier protein reductase; | 99.77 | |
| 3op4_A | 248 | 3-oxoacyl-[acyl-carrier protein] reductase; 3-keto | 99.77 | |
| 4dqx_A | 277 | Probable oxidoreductase protein; structural genomi | 99.77 | |
| 2d1y_A | 256 | Hypothetical protein TT0321; strucrtural genomics, | 99.77 | |
| 1cyd_A | 244 | Carbonyl reductase; short-chain dehydrogenase, oxi | 99.77 | |
| 3tl3_A | 257 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.77 | |
| 2ae2_A | 260 | Protein (tropinone reductase-II); oxidoreductase, | 99.77 | |
| 1ja9_A | 274 | 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p | 99.76 | |
| 1o5i_A | 249 | 3-oxoacyl-(acyl carrier protein) reductase; TM1169 | 99.76 | |
| 3grp_A | 266 | 3-oxoacyl-(acyl carrierprotein) reductase; structu | 99.76 | |
| 2bd0_A | 244 | Sepiapterin reductase; oxidoreductase; HET: NAP BI | 99.76 | |
| 1ae1_A | 273 | Tropinone reductase-I; oxidoreductase, tropane alk | 99.76 | |
| 3p19_A | 266 | BFPVVD8, putative blue fluorescent protein; rossma | 99.76 | |
| 3cxt_A | 291 | Dehydrogenase with different specificities; rossma | 99.76 | |
| 3tzq_B | 271 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.76 | |
| 1uay_A | 242 | Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid | 99.76 | |
| 3svt_A | 281 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.76 | |
| 2wsb_A | 254 | Galactitol dehydrogenase; oxidoreductase, SDR, ros | 99.76 | |
| 2ekp_A | 239 | 2-deoxy-D-gluconate 3-dehydrogenase; structural ge | 99.76 | |
| 3osu_A | 246 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.76 | |
| 1gee_A | 261 | Glucose 1-dehydrogenase; short-chain dehydrogenase | 99.76 | |
| 2gdz_A | 267 | NAD+-dependent 15-hydroxyprostaglandin dehydrogen; | 99.76 | |
| 3lyl_A | 247 | 3-oxoacyl-(acyl-carrier-protein) reductase; alpha | 99.76 | |
| 3s55_A | 281 | Putative short-chain dehydrogenase/reductase; stru | 99.76 | |
| 1hxh_A | 253 | 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b | 99.76 | |
| 2rhc_B | 277 | Actinorhodin polyketide ketoreductase; oxidoreduct | 99.76 | |
| 3d7l_A | 202 | LIN1944 protein; APC89317, structural genomics, PS | 99.76 | |
| 4iin_A | 271 | 3-ketoacyl-acyl carrier protein reductase (FABG); | 99.76 | |
| 3afn_B | 258 | Carbonyl reductase; alpha/beta/alpha, rossmann-fol | 99.76 | |
| 3pk0_A | 262 | Short-chain dehydrogenase/reductase SDR; ssgcid, s | 99.76 | |
| 3gk3_A | 269 | Acetoacetyl-COA reductase; acetoacetyl-CO reductas | 99.76 | |
| 3ged_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 99.75 | |
| 3a28_C | 258 | L-2.3-butanediol dehydrogenase; chiral substrate r | 99.75 | |
| 4dmm_A | 269 | 3-oxoacyl-[acyl-carrier-protein] reductase; rossma | 99.75 | |
| 2dtx_A | 264 | Glucose 1-dehydrogenase related protein; rossmann | 99.75 | |
| 2ph3_A | 245 | 3-oxoacyl-[acyl carrier protein] reductase; TTHA04 | 99.75 | |
| 3o38_A | 266 | Short chain dehydrogenase; tuberculosis, ortholog | 99.75 | |
| 2yut_A | 207 | Putative short-chain oxidoreductase; alpha and bet | 99.75 | |
| 2b4q_A | 276 | Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier | 99.75 | |
| 1edo_A | 244 | Beta-keto acyl carrier protein reductase; nucleoti | 99.75 | |
| 3tjr_A | 301 | Short chain dehydrogenase; structural genomics, se | 99.75 | |
| 1yo6_A | 250 | Putative carbonyl reductase sniffer; tyrosine-depe | 99.75 | |
| 3gaf_A | 256 | 7-alpha-hydroxysteroid dehydrogenase; seattle stru | 99.75 | |
| 3sju_A | 279 | Keto reductase; short-chain dehydrogenase, oxidore | 99.75 | |
| 3pgx_A | 280 | Carveol dehydrogenase; structural genomics, seattl | 99.75 | |
| 3ppi_A | 281 | 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de | 99.75 | |
| 2nm0_A | 253 | Probable 3-oxacyl-(acyl-carrier-protein) reductas; | 99.75 | |
| 3n74_A | 261 | 3-ketoacyl-(acyl-carrier-protein) reductase; seatt | 99.74 | |
| 3h7a_A | 252 | Short chain dehydrogenase; oxidoreductase, PSI-2, | 99.74 | |
| 3tox_A | 280 | Short chain dehydrogenase; structural genomics, PS | 99.74 | |
| 3rd5_A | 291 | Mypaa.01249.C; ssgcid, structural genomics, seattl | 99.74 | |
| 2ag5_A | 246 | DHRS6, dehydrogenase/reductase (SDR family) member | 99.74 | |
| 3rwb_A | 247 | TPLDH, pyridoxal 4-dehydrogenase; short chain dehy | 99.74 | |
| 3oid_A | 258 | Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa | 99.74 | |
| 3rih_A | 293 | Short chain dehydrogenase or reductase; structural | 99.74 | |
| 4egf_A | 266 | L-xylulose reductase; structural genomics, ssgcid, | 99.74 | |
| 3v8b_A | 283 | Putative dehydrogenase, possibly 3-oxoacyl-[acyl- | 99.74 | |
| 3gvc_A | 277 | Oxidoreductase, probable short-chain type dehydrog | 99.74 | |
| 3ucx_A | 264 | Short chain dehydrogenase; ssgcid, seattle structu | 99.74 | |
| 3rkr_A | 262 | Short chain oxidoreductase; rossmann fold; HET: NA | 99.74 | |
| 1g0o_A | 283 | Trihydroxynaphthalene reductase; protein-NADPH-act | 99.74 | |
| 3qiv_A | 253 | Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR | 99.73 | |
| 3ftp_A | 270 | 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid | 99.73 | |
| 1xkq_A | 280 | Short-chain reductase family member (5D234); parra | 99.73 | |
| 4fc7_A | 277 | Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman | 99.73 | |
| 3l77_A | 235 | Short-chain alcohol dehydrogenase; oxidoreductase; | 99.73 | |
| 1h5q_A | 265 | NADP-dependent mannitol dehydrogenase; oxidoreduct | 99.73 | |
| 1xhl_A | 297 | Short-chain dehydrogenase/reductase family member | 99.73 | |
| 3ioy_A | 319 | Short-chain dehydrogenase/reductase SDR; structura | 99.73 | |
| 1mxh_A | 276 | Pteridine reductase 2; SDR topology, protein-subst | 99.73 | |
| 1xg5_A | 279 | ARPG836; short chain dehydrogenase, human, SGC, st | 99.73 | |
| 2jah_A | 247 | Clavulanic acid dehydrogenase; short-chain dehydro | 99.73 | |
| 1fjh_A | 257 | 3alpha-hydroxysteroid dehydrogenase/carbonyl reduc | 99.73 | |
| 3i4f_A | 264 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 99.73 | |
| 3vtz_A | 269 | Glucose 1-dehydrogenase; rossmann fold, oxidoreduc | 99.73 | |
| 1uzm_A | 247 | 3-oxoacyl-[acyl-carrier protein] reductase; beta-k | 99.73 | |
| 4da9_A | 280 | Short-chain dehydrogenase/reductase; structural ge | 99.73 | |
| 3ezl_A | 256 | Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA | 99.73 | |
| 4eso_A | 255 | Putative oxidoreductase; NADP, structural genomics | 99.73 | |
| 3uf0_A | 273 | Short-chain dehydrogenase/reductase SDR; gluconate | 99.72 | |
| 3asu_A | 248 | Short-chain dehydrogenase/reductase SDR; SDR famil | 99.72 | |
| 3r3s_A | 294 | Oxidoreductase; structural genomics, csgid, center | 99.72 | |
| 1yxm_A | 303 | Pecra, peroxisomal trans 2-enoyl COA reductase; pe | 99.72 | |
| 1zem_A | 262 | Xylitol dehydrogenase; rossmann fold, dinucleotide | 99.72 | |
| 4dyv_A | 272 | Short-chain dehydrogenase/reductase SDR; structura | 99.72 | |
| 3ijr_A | 291 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.72 | |
| 4ibo_A | 271 | Gluconate dehydrogenase; enzyme function initiativ | 99.72 | |
| 4iiu_A | 267 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 99.72 | |
| 3e03_A | 274 | Short chain dehydrogenase; structural genomics, PS | 99.72 | |
| 4b79_A | 242 | PA4098, probable short-chain dehydrogenase; oxidor | 99.72 | |
| 3sx2_A | 278 | Putative 3-ketoacyl-(acyl-carrier-protein) reduct; | 99.72 | |
| 3sc4_A | 285 | Short chain dehydrogenase (A0QTM2 homolog); ssgcid | 99.71 | |
| 3l6e_A | 235 | Oxidoreductase, short-chain dehydrogenase/reducta; | 99.71 | |
| 3r1i_A | 276 | Short-chain type dehydrogenase/reductase; structur | 99.71 | |
| 3tfo_A | 264 | Putative 3-oxoacyl-(acyl-carrier-protein) reducta; | 99.71 | |
| 3guy_A | 230 | Short-chain dehydrogenase/reductase SDR; structura | 99.71 | |
| 2a4k_A | 263 | 3-oxoacyl-[acyl carrier protein] reductase; reduct | 99.71 | |
| 3v2g_A | 271 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.71 | |
| 1yb1_A | 272 | 17-beta-hydroxysteroid dehydrogenase type XI; shor | 99.71 | |
| 3edm_A | 259 | Short chain dehydrogenase; structural genomics, ox | 99.71 | |
| 1sby_A | 254 | Alcohol dehydrogenase; ternary complex, NAD, trifl | 99.7 | |
| 3uxy_A | 266 | Short-chain dehydrogenase/reductase SDR; structura | 99.7 | |
| 3lf2_A | 265 | Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross | 99.7 | |
| 3u9l_A | 324 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.7 | |
| 3tsc_A | 277 | Putative oxidoreductase; structural genomics, seat | 99.7 | |
| 1sny_A | 267 | Sniffer CG10964-PA; alpha and beta protein, rossma | 99.7 | |
| 3qlj_A | 322 | Short chain dehydrogenase; structural genomics, se | 99.7 | |
| 3ctm_A | 279 | Carbonyl reductase; alcohol dehydrogenase, short-c | 99.7 | |
| 3uve_A | 286 | Carveol dehydrogenase ((+)-trans-carveol dehydrog; | 99.7 | |
| 2nwq_A | 272 | Probable short-chain dehydrogenase; oxidoreductase | 99.7 | |
| 3nyw_A | 250 | Putative oxidoreductase; fatty acid synthesis,3-ox | 99.7 | |
| 4e3z_A | 272 | Putative oxidoreductase protein; PSI-biology, stru | 99.7 | |
| 4fn4_A | 254 | Short chain dehydrogenase; NADH-binding, rossmann | 99.69 | |
| 3kzv_A | 254 | Uncharacterized oxidoreductase YIR035C; cytoplasmi | 99.69 | |
| 3t4x_A | 267 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.69 | |
| 4dry_A | 281 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.69 | |
| 3ksu_A | 262 | 3-oxoacyl-acyl carrier protein reductase; structur | 99.69 | |
| 3rku_A | 287 | Oxidoreductase YMR226C; substrate fingerprint, sho | 99.69 | |
| 3t7c_A | 299 | Carveol dehydrogenase; structural genomics, seattl | 99.69 | |
| 4imr_A | 275 | 3-oxoacyl-(acyl-carrier-protein) reductase; oxidor | 99.69 | |
| 3f1l_A | 252 | Uncharacterized oxidoreductase YCIK; E. coli, NADP | 99.69 | |
| 3orf_A | 251 | Dihydropteridine reductase; alpha-beta-alpha sandw | 99.69 | |
| 4gkb_A | 258 | 3-oxoacyl-[acyl-carrier protein] reductase; putati | 99.68 | |
| 4e4y_A | 244 | Short chain dehydrogenase family protein; structur | 99.68 | |
| 2x9g_A | 288 | PTR1, pteridine reductase; short chain dehydrogena | 99.68 | |
| 1yde_A | 270 | Retinal dehydrogenase/reductase 3; oxidoreductase, | 99.68 | |
| 3oig_A | 266 | Enoyl-[acyl-carrier-protein] reductase [NADH]; fat | 99.68 | |
| 3u5t_A | 267 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.68 | |
| 2p91_A | 285 | Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD | 99.68 | |
| 3pxx_A | 287 | Carveol dehydrogenase; structural genomics, seattl | 99.68 | |
| 3k31_A | 296 | Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI | 99.67 | |
| 1xu9_A | 286 | Corticosteroid 11-beta-dehydrogenase, isozyme 1; h | 99.67 | |
| 3oec_A | 317 | Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; | 99.67 | |
| 2qhx_A | 328 | Pteridine reductase 1; oxidoreductase, short-chain | 99.67 | |
| 2wyu_A | 261 | Enoyl-[acyl carrier protein] reductase; oxidoreduc | 99.67 | |
| 3zv4_A | 281 | CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox | 99.67 | |
| 3is3_A | 270 | 17BETA-hydroxysteroid dehydrogenase; short chain d | 99.67 | |
| 3e9n_A | 245 | Putative short-chain dehydrogenase/reductase; stru | 99.67 | |
| 3icc_A | 255 | Putative 3-oxoacyl-(acyl carrier protein) reducta; | 99.67 | |
| 1ooe_A | 236 | Dihydropteridine reductase; structural genomics, P | 99.66 | |
| 1wma_A | 276 | Carbonyl reductase [NADPH] 1; oxidoreductase; HET: | 99.66 | |
| 3ek2_A | 271 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 99.66 | |
| 3kvo_A | 346 | Hydroxysteroid dehydrogenase-like protein 2; HSDL2 | 99.66 | |
| 1dhr_A | 241 | Dihydropteridine reductase; oxidoreductase(acting | 99.66 | |
| 2qq5_A | 260 | DHRS1, dehydrogenase/reductase SDR family member 1 | 99.66 | |
| 1e7w_A | 291 | Pteridine reductase; dihydrofolate reductase, shor | 99.66 | |
| 2pd4_A | 275 | Enoyl-[acyl-carrier-protein] reductase [NADH]; ant | 99.65 | |
| 1qsg_A | 265 | Enoyl-[acyl-carrier-protein] reductase; enoyl redu | 99.65 | |
| 3uce_A | 223 | Dehydrogenase; rossmann fold, oxidoreductase; HET: | 99.65 | |
| 2fr1_A | 486 | Erythromycin synthase, eryai; short chain dehydrog | 99.64 | |
| 4fgs_A | 273 | Probable dehydrogenase protein; PSI-biology, nysgr | 99.64 | |
| 3nrc_A | 280 | Enoyl-[acyl-carrier-protein] reductase (NADH); ros | 99.64 | |
| 3i1j_A | 247 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.64 | |
| 4fs3_A | 256 | Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; | 99.64 | |
| 4g81_D | 255 | Putative hexonate dehydrogenase; enzyme function i | 99.64 | |
| 3grk_A | 293 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 99.64 | |
| 3gdg_A | 267 | Probable NADP-dependent mannitol dehydrogenase; ro | 99.63 | |
| 1zmt_A | 254 | Haloalcohol dehalogenase HHEC; halohydrin dehaloge | 99.61 | |
| 4hp8_A | 247 | 2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi | 99.6 | |
| 2z5l_A | 511 | Tylkr1, tylactone synthase starter module and modu | 99.6 | |
| 4h15_A | 261 | Short chain alcohol dehydrogenase-related dehydro; | 99.59 | |
| 3o26_A | 311 | Salutaridine reductase; short chain dehydrogenase/ | 99.59 | |
| 1jtv_A | 327 | 17 beta-hydroxysteroid dehydrogenase type 1; stero | 99.58 | |
| 3u0b_A | 454 | Oxidoreductase, short chain dehydrogenase/reducta | 99.57 | |
| 1zmo_A | 244 | Halohydrin dehalogenase; haloalcohol dehalogenase, | 99.57 | |
| 1oaa_A | 259 | Sepiapterin reductase; tetrahydrobiopterin, oxidor | 99.57 | |
| 1gz6_A | 319 | Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF | 99.55 | |
| 2h7i_A | 269 | Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi | 99.54 | |
| 3mje_A | 496 | AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1. | 99.49 | |
| 3oml_A | 613 | GH14720P, peroxisomal multifunctional enzyme type | 99.41 | |
| 3qp9_A | 525 | Type I polyketide synthase pikaii; rossmann fold, | 99.41 | |
| 3lt0_A | 329 | Enoyl-ACP reductase; triclosan, triclosan variant, | 99.35 | |
| 1d7o_A | 297 | Enoyl-[acyl-carrier protein] reductase (NADH) PRE; | 99.35 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 99.3 | |
| 2ptg_A | 319 | Enoyl-acyl carrier reductase; apicomplexa, enoyl ( | 99.3 | |
| 2o2s_A | 315 | Enoyl-acyl carrier reductase; enoyl reductase, tri | 99.27 | |
| 3ic5_A | 118 | Putative saccharopine dehydrogenase; structural ge | 99.25 | |
| 3s8m_A | 422 | Enoyl-ACP reductase; rossmann fold, oxidoreductase | 99.14 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 99.12 | |
| 3slk_A | 795 | Polyketide synthase extender module 2; rossmann fo | 99.07 | |
| 2uv8_A | 1887 | Fatty acid synthase subunit alpha (FAS2); fatty ac | 99.05 | |
| 4eue_A | 418 | Putative reductase CA_C0462; TER, biofuel, synthet | 99.02 | |
| 3zu3_A | 405 | Putative reductase YPO4104/Y4119/YP_4011; oxidored | 99.02 | |
| 2uv9_A | 1878 | Fatty acid synthase alpha subunits; fungal, dehydr | 99.01 | |
| 2pff_A | 1688 | Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl | 98.98 | |
| 1y7t_A | 327 | Malate dehydrogenase; NAD-dependent-MDH-NADPH comp | 98.85 | |
| 2hmt_A | 144 | YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane | 98.79 | |
| 1lu9_A | 287 | Methylene tetrahydromethanopterin dehydrogenase; a | 98.73 | |
| 3llv_A | 141 | Exopolyphosphatase-related protein; NAD(P)-binding | 98.72 | |
| 1lss_A | 140 | TRK system potassium uptake protein TRKA homolog; | 98.65 | |
| 2g1u_A | 155 | Hypothetical protein TM1088A; structural genomics, | 98.62 | |
| 1id1_A | 153 | Putative potassium channel protein; RCK domain, E. | 98.61 | |
| 2vz8_A | 2512 | Fatty acid synthase; transferase, phosphopantethei | 98.59 | |
| 3c85_A | 183 | Putative glutathione-regulated potassium-efflux S | 98.52 | |
| 3abi_A | 365 | Putative uncharacterized protein PH1688; L-lysine | 98.51 | |
| 3zen_D | 3089 | Fatty acid synthase; transferase, mycolic acid bio | 98.4 | |
| 4ina_A | 405 | Saccharopine dehydrogenase; structural genomics, P | 98.38 | |
| 1ff9_A | 450 | Saccharopine reductase; lysine biosynthesis, alpha | 98.37 | |
| 3fwz_A | 140 | Inner membrane protein YBAL; TRKA-N domain, E.coli | 98.35 | |
| 3l4b_C | 218 | TRKA K+ channel protien TM1088B; potassium channel | 98.31 | |
| 2axq_A | 467 | Saccharopine dehydrogenase; rossmann fold variant, | 98.28 | |
| 2aef_A | 234 | Calcium-gated potassium channel MTHK; rossmann fol | 98.19 | |
| 1pqw_A | 198 | Polyketide synthase; rossmann fold, dimer, structu | 98.19 | |
| 1smk_A | 326 | Malate dehydrogenase, glyoxysomal; tricarboxylic c | 98.18 | |
| 2gk4_A | 232 | Conserved hypothetical protein; alpha-beta-alpha s | 98.17 | |
| 1b8p_A | 329 | Protein (malate dehydrogenase); oxidoreductase; 1. | 98.06 | |
| 4ggo_A | 401 | Trans-2-enoyl-COA reductase; rossmann fold, oxidor | 98.02 | |
| 1u7z_A | 226 | Coenzyme A biosynthesis bifunctional protein coabc | 98.0 | |
| 2hcy_A | 347 | Alcohol dehydrogenase 1; tetramer of asymmetric di | 97.93 | |
| 2z2v_A | 365 | Hypothetical protein PH1688; L-lysine dehydrogenas | 97.92 | |
| 3l9w_A | 413 | Glutathione-regulated potassium-efflux system Pro | 97.89 | |
| 1hye_A | 313 | L-lactate/malate dehydrogenase; nucleotide binding | 97.82 | |
| 3tnl_A | 315 | Shikimate dehydrogenase; structural genomics, cent | 97.79 | |
| 1o6z_A | 303 | MDH, malate dehydrogenase; halophilic, ION-binding | 97.77 | |
| 1v3u_A | 333 | Leukotriene B4 12- hydroxydehydrogenase/prostaglan | 97.73 | |
| 1lnq_A | 336 | MTHK channels, potassium channel related protein; | 97.68 | |
| 2eez_A | 369 | Alanine dehydrogenase; TTHA0216, structural genomi | 97.67 | |
| 1jay_A | 212 | Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma | 97.63 | |
| 1wly_A | 333 | CAAR, 2-haloacrylate reductase; NADPH-dependent ox | 97.63 | |
| 1qor_A | 327 | Quinone oxidoreductase; HET: NAP; 2.20A {Escherich | 97.62 | |
| 2nqt_A | 352 | N-acetyl-gamma-glutamyl-phosphate reductase; apopr | 97.57 | |
| 4g65_A | 461 | TRK system potassium uptake protein TRKA; structur | 97.57 | |
| 4b7c_A | 336 | Probable oxidoreductase; NADP cofactor, rossmann f | 97.54 | |
| 1iz0_A | 302 | Quinone oxidoreductase; APO-enzyme, riken structur | 97.51 | |
| 2eih_A | 343 | Alcohol dehydrogenase; zinc ION binding protein, s | 97.5 | |
| 2j3h_A | 345 | NADP-dependent oxidoreductase P1; double bond redu | 97.46 | |
| 2j8z_A | 354 | Quinone oxidoreductase; medium-chain dehydrogenase | 97.45 | |
| 1yqd_A | 366 | Sinapyl alcohol dehydrogenase; lignin, monolignol, | 97.42 | |
| 2hjs_A | 340 | USG-1 protein homolog; aspartate-semialdehyde dehy | 97.41 | |
| 1yb5_A | 351 | Quinone oxidoreductase; medium-chain dehydrogenase | 97.37 | |
| 3t4e_A | 312 | Quinate/shikimate dehydrogenase; structural genomi | 97.35 | |
| 2vns_A | 215 | Metalloreductase steap3; metal-binding, transmembr | 97.35 | |
| 1nyt_A | 271 | Shikimate 5-dehydrogenase; alpha/beta domains, WID | 97.34 | |
| 3jyo_A | 283 | Quinate/shikimate dehydrogenase; enzyme-cofactor c | 97.33 | |
| 2c0c_A | 362 | Zinc binding alcohol dehydrogenase, domain contain | 97.32 | |
| 4dup_A | 353 | Quinone oxidoreductase; PSI-biology, structural ge | 97.3 | |
| 1pjc_A | 361 | Protein (L-alanine dehydrogenase); oxidoreductase, | 97.29 | |
| 3oj0_A | 144 | Glutr, glutamyl-tRNA reductase; structural genomic | 97.29 | |
| 1jw9_B | 249 | Molybdopterin biosynthesis MOEB protein; MOEB: mod | 97.28 | |
| 1jvb_A | 347 | NAD(H)-dependent alcohol dehydrogenase; archaeon, | 97.28 | |
| 2ozp_A | 345 | N-acetyl-gamma-glutamyl-phosphate reductase; amino | 97.27 | |
| 2zb4_A | 357 | Prostaglandin reductase 2; rossmann fold, alternat | 97.25 | |
| 3don_A | 277 | Shikimate dehydrogenase; alpha-beta structure, ros | 97.25 | |
| 2egg_A | 297 | AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff | 97.24 | |
| 2r00_A | 336 | Aspartate-semialdehyde dehydrogenase; conformation | 97.16 | |
| 3jyn_A | 325 | Quinone oxidoreductase; rossmann fold, protein-NAD | 97.15 | |
| 1rjw_A | 339 | ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD | 97.13 | |
| 3qwb_A | 334 | Probable quinone oxidoreductase; rossmann fold, qu | 97.12 | |
| 1xyg_A | 359 | Putative N-acetyl-gamma-glutamyl-phosphate reduct; | 97.11 | |
| 4g65_A | 461 | TRK system potassium uptake protein TRKA; structur | 97.09 | |
| 3pwk_A | 366 | Aspartate-semialdehyde dehydrogenase; NADP binding | 97.09 | |
| 2vhw_A | 377 | Alanine dehydrogenase; NAD, secreted, oxidoreducta | 97.06 | |
| 3c24_A | 286 | Putative oxidoreductase; YP_511008.1, structural g | 97.03 | |
| 3h8v_A | 292 | Ubiquitin-like modifier-activating enzyme 5; rossm | 97.02 | |
| 1ys4_A | 354 | Aspartate-semialdehyde dehydrogenase; oxidoreducta | 97.0 | |
| 3d4o_A | 293 | Dipicolinate synthase subunit A; NP_243269.1, stru | 97.0 | |
| 2ew2_A | 316 | 2-dehydropantoate 2-reductase, putative; alpha-str | 97.0 | |
| 2rir_A | 300 | Dipicolinate synthase, A chain; structural genomic | 96.99 | |
| 2d8a_A | 348 | PH0655, probable L-threonine 3-dehydrogenase; pyro | 96.99 | |
| 5mdh_A | 333 | Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH | 96.94 | |
| 1p9l_A | 245 | Dihydrodipicolinate reductase; oxidoreductase, lys | 96.92 | |
| 3gms_A | 340 | Putative NADPH:quinone reductase; structural genom | 96.91 | |
| 2vn8_A | 375 | Reticulon-4-interacting protein 1; mitochondrion, | 96.9 | |
| 3phh_A | 269 | Shikimate dehydrogenase; shikimate pathway, helico | 96.9 | |
| 4eye_A | 342 | Probable oxidoreductase; structural genomics, niai | 96.87 | |
| 3pwz_A | 272 | Shikimate dehydrogenase 3; alpha-beta, oxidoreduct | 96.81 | |
| 4a0s_A | 447 | Octenoyl-COA reductase/carboxylase; oxidoreductase | 96.8 | |
| 3pef_A | 287 | 6-phosphogluconate dehydrogenase, NAD-binding; gam | 96.79 | |
| 1mld_A | 314 | Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D | 96.78 | |
| 3gaz_A | 343 | Alcohol dehydrogenase superfamily protein; oxidore | 96.76 | |
| 4dll_A | 320 | 2-hydroxy-3-oxopropionate reductase; structural ge | 96.76 | |
| 3pi7_A | 349 | NADH oxidoreductase; groes-like fold, NAD(P)-bindi | 96.75 | |
| 2dq4_A | 343 | L-threonine 3-dehydrogenase; NAD-dependent, oxidor | 96.73 | |
| 2ep5_A | 350 | 350AA long hypothetical aspartate-semialdehyde deh | 96.71 | |
| 3doj_A | 310 | AT3G25530, dehydrogenase-like protein; gamma-hydro | 96.71 | |
| 1t4b_A | 367 | Aspartate-semialdehyde dehydrogenase; asadh, HOSR, | 96.7 | |
| 3u62_A | 253 | Shikimate dehydrogenase; shikimate pathway, oxidor | 96.7 | |
| 3orq_A | 377 | N5-carboxyaminoimidazole ribonucleotide synthetas; | 96.69 | |
| 3g0o_A | 303 | 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine | 96.69 | |
| 2pv7_A | 298 | T-protein [includes: chorismate mutase (EC 5.4.99 | 96.69 | |
| 2h78_A | 302 | Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601 | 96.69 | |
| 1nvt_A | 287 | Shikimate 5'-dehydrogenase; structural genomics, P | 96.68 | |
| 4gx0_A | 565 | TRKA domain protein; membrane protein, ION channel | 96.67 | |
| 3o8q_A | 281 | Shikimate 5-dehydrogenase I alpha; structural geno | 96.67 | |
| 1vpd_A | 299 | Tartronate semialdehyde reductase; structural geno | 96.66 | |
| 3krt_A | 456 | Crotonyl COA reductase; structural genomics, prote | 96.66 | |
| 3fbt_A | 282 | Chorismate mutase and shikimate 5-dehydrogenase fu | 96.65 | |
| 1gpj_A | 404 | Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro | 96.64 | |
| 3rui_A | 340 | Ubiquitin-like modifier-activating enzyme ATG7; au | 96.64 | |
| 2cdc_A | 366 | Glucose dehydrogenase glucose 1-dehydrogenase, DHG | 96.64 | |
| 2cf5_A | 357 | Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign | 96.64 | |
| 3k5i_A | 403 | Phosphoribosyl-aminoimidazole carboxylase; purine | 96.61 | |
| 1y81_A | 138 | Conserved hypothetical protein; hyperthermophIle, | 96.6 | |
| 3p2y_A | 381 | Alanine dehydrogenase/pyridine nucleotide transhy; | 96.57 | |
| 1uuf_A | 369 | YAHK, zinc-type alcohol dehydrogenase-like protein | 96.56 | |
| 1dih_A | 273 | Dihydrodipicolinate reductase; oxidoreductase; HET | 96.56 | |
| 3dtt_A | 245 | NADP oxidoreductase; structural genomics, joint ce | 96.56 | |
| 3fi9_A | 343 | Malate dehydrogenase; structural genomics, oxidore | 96.56 | |
| 4e4t_A | 419 | Phosphoribosylaminoimidazole carboxylase, ATPase; | 96.54 | |
| 3obb_A | 300 | Probable 3-hydroxyisobutyrate dehydrogenase; struc | 96.53 | |
| 3dr3_A | 337 | N-acetyl-gamma-glutamyl-phosphate reductase; csgid | 96.5 | |
| 1h2b_A | 359 | Alcohol dehydrogenase; oxidoreductase, archaea, hy | 96.49 | |
| 1l7d_A | 384 | Nicotinamide nucleotide transhydrogenase, subunit | 96.48 | |
| 3l6d_A | 306 | Putative oxidoreductase; structural genomics, prot | 96.48 | |
| 1txg_A | 335 | Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxid | 96.47 | |
| 2hk9_A | 275 | Shikimate dehydrogenase; shikimate pathway, drug d | 96.45 | |
| 1bg6_A | 359 | N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L | 96.45 | |
| 1zud_1 | 251 | Adenylyltransferase THIF; thiamin, thiazole, prote | 96.45 | |
| 3cky_A | 301 | 2-hydroxymethyl glutarate dehydrogenase; rossmann | 96.43 | |
| 3m6i_A | 363 | L-arabinitol 4-dehydrogenase; medium chain dehydro | 96.43 | |
| 3qha_A | 296 | Putative oxidoreductase; seattle structural genomi | 96.43 | |
| 1piw_A | 360 | Hypothetical zinc-type alcohol dehydrogenase- like | 96.39 | |
| 2gf2_A | 296 | Hibadh, 3-hydroxyisobutyrate dehydrogenase; struct | 96.38 | |
| 4gbj_A | 297 | 6-phosphogluconate dehydrogenase NAD-binding; stru | 96.38 | |
| 3pdu_A | 287 | 3-hydroxyisobutyrate dehydrogenase family protein; | 96.37 | |
| 2duw_A | 145 | Putative COA-binding protein; ligand binding prote | 96.37 | |
| 2o7s_A | 523 | DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat | 96.37 | |
| 3fbg_A | 346 | Putative arginate lyase; structural genomics, unkn | 96.35 | |
| 1mv8_A | 436 | GMD, GDP-mannose 6-dehydrogenase; rossman fold, do | 96.34 | |
| 3gg2_A | 450 | Sugar dehydrogenase, UDP-glucose/GDP-mannose dehyd | 96.34 | |
| 4gx0_A | 565 | TRKA domain protein; membrane protein, ION channel | 96.32 | |
| 1iuk_A | 140 | Hypothetical protein TT1466; structural genomics, | 96.31 | |
| 1x13_A | 401 | NAD(P) transhydrogenase subunit alpha; NAD(H)-bind | 96.3 | |
| 3two_A | 348 | Mannitol dehydrogenase; cinnamyl-alcohol dehydroge | 96.3 | |
| 3q2o_A | 389 | Phosphoribosylaminoimidazole carboxylase, ATPase; | 96.28 | |
| 2gcg_A | 330 | Glyoxylate reductase/hydroxypyruvate reductase; NA | 96.27 | |
| 4dio_A | 405 | NAD(P) transhydrogenase subunit alpha PART 1; stru | 96.27 | |
| 1e3j_A | 352 | NADP(H)-dependent ketose reductase; oxidoreductase | 96.26 | |
| 3pp8_A | 315 | Glyoxylate/hydroxypyruvate reductase A; structural | 96.25 | |
| 2yv3_A | 331 | Aspartate-semialdehyde dehydrogenase; aspartate pa | 96.25 | |
| 2raf_A | 209 | Putative dinucleotide-binding oxidoreductase; NP_7 | 96.21 | |
| 3uw3_A | 377 | Aspartate-semialdehyde dehydrogenase; structural g | 96.21 | |
| 2ph5_A | 480 | Homospermidine synthase; alpha-beta protein, struc | 96.19 | |
| 1ur5_A | 309 | Malate dehydrogenase; oxidoreductase, tricarboxyli | 96.18 | |
| 3pzr_A | 370 | Aspartate-semialdehyde dehydrogenase; NADP, oxidor | 96.18 | |
| 4ezb_A | 317 | Uncharacterized conserved protein; structural geno | 96.16 | |
| 3gt0_A | 247 | Pyrroline-5-carboxylate reductase; structural geno | 96.15 | |
| 3tqh_A | 321 | Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella | 96.15 | |
| 4e21_A | 358 | 6-phosphogluconate dehydrogenase (decarboxylating; | 96.13 | |
| 2ahr_A | 259 | Putative pyrroline carboxylate reductase; pyrrolin | 96.12 | |
| 3uog_A | 363 | Alcohol dehydrogenase; structural genomics, protei | 96.1 | |
| 2uyy_A | 316 | N-PAC protein; long-chain dehydrogenase, cytokine; | 96.09 | |
| 3tri_A | 280 | Pyrroline-5-carboxylate reductase; amino acid bios | 96.09 | |
| 3h5n_A | 353 | MCCB protein; ubiquitin-activating enzyme, microci | 96.08 | |
| 3dfz_A | 223 | SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase | 96.08 | |
| 3jtm_A | 351 | Formate dehydrogenase, mitochondrial; mitochondrio | 96.08 | |
| 1pzg_A | 331 | LDH, lactate dehydrogenase; apicomplexa, APAD, tet | 96.06 | |
| 1xa0_A | 328 | Putative NADPH dependent oxidoreductases; structur | 96.06 | |
| 4g2n_A | 345 | D-isomer specific 2-hydroxyacid dehydrogenase, Na; | 96.05 | |
| 4huj_A | 220 | Uncharacterized protein; PSI-biology, nysgrc, stru | 96.05 | |
| 3hsk_A | 381 | Aspartate-semialdehyde dehydrogenase; candida albi | 96.02 | |
| 3hg7_A | 324 | D-isomer specific 2-hydroxyacid dehydrogenase FAM | 96.02 | |
| 3gvx_A | 290 | Glycerate dehydrogenase related protein; NYSGXRC, | 96.02 | |
| 1cdo_A | 374 | Alcohol dehydrogenase; oxidoreductase, oxidoreduct | 96.01 | |
| 4e12_A | 283 | Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1 | 96.0 | |
| 1wwk_A | 307 | Phosphoglycerate dehydrogenase; riken structural g | 96.0 | |
| 3ax6_A | 380 | Phosphoribosylaminoimidazole carboxylase, ATPase; | 95.99 | |
| 2nu8_A | 288 | Succinyl-COA ligase [ADP-forming] subunit alpha; c | 95.99 | |
| 2dph_A | 398 | Formaldehyde dismutase; dismutation of aldehydes, | 95.97 | |
| 3h9u_A | 436 | Adenosylhomocysteinase; NAD CO-factor complex, str | 95.97 | |
| 4dpk_A | 359 | Malonyl-COA/succinyl-COA reductase; dinucleotide b | 95.89 | |
| 4dpl_A | 359 | Malonyl-COA/succinyl-COA reductase; dinucleotide b | 95.89 | |
| 1p77_A | 272 | Shikimate 5-dehydrogenase; NADPH, oxidoreductase; | 95.89 | |
| 2cuk_A | 311 | Glycerate dehydrogenase/glyoxylate reductase; stru | 95.89 | |
| 3n58_A | 464 | Adenosylhomocysteinase; ssgcid, hydrolase, structu | 95.88 | |
| 3ggo_A | 314 | Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b | 95.88 | |
| 3pqe_A | 326 | L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas | 95.87 | |
| 3gvp_A | 435 | Adenosylhomocysteinase 3; protein CO-factor comple | 95.87 | |
| 1edz_A | 320 | 5,10-methylenetetrahydrofolate dehydrogenase; nucl | 95.87 | |
| 2jhf_A | 374 | Alcohol dehydrogenase E chain; oxidoreductase, met | 95.87 | |
| 3tz6_A | 344 | Aspartate-semialdehyde dehydrogenase; asadh, ASD, | 95.86 | |
| 3ba1_A | 333 | HPPR, hydroxyphenylpyruvate reductase; two domain | 95.86 |
| >3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
Probab=99.95 E-value=6.1e-27 Score=204.23 Aligned_cols=191 Identities=17% Similarity=0.157 Sum_probs=153.0
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCC-HHHHHHHhcCccEEEEcCCc-----
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASN-KKFLKTALRGVRSIICPSEG----- 173 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d-~~~l~~~~~~~d~vi~~~~g----- 173 (306)
|+|+||||+|+||++++++|+++|++|++++|+.++.... .+++++.+|++| .+++.++++++|+|||+++.
T Consensus 1 M~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~--~~~~~~~~D~~d~~~~~~~~~~~~d~vi~~ag~~~~~~ 78 (219)
T 3dqp_A 1 MKIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY--NNVKAVHFDVDWTPEEMAKQLHGMDAIINVSGSGGKSL 78 (219)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCC--TTEEEEECCTTSCHHHHHTTTTTCSEEEECCCCTTSSC
T ss_pred CeEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhc--CCceEEEecccCCHHHHHHHHcCCCEEEECCcCCCCCc
Confidence 5899999999999999999999999999999999775433 579999999999 99999999999999998442
Q ss_pred ---------hhhhcccccCCCEEEEecCcccccCCCCcc--cccchHHHHHHHHHHHHH-HhcCCCEEEEEcCcccCCCC
Q 021854 174 ---------FISNAGSLKGVQHVILLSQLSVYRGSGGIQ--ALMKGNARKLAEQDESML-MASGIPYTIIRTGVLQNTPG 241 (306)
Q Consensus 174 ---------~~~~~a~~~gvkr~V~iSS~~~~~~~~~~~--~~~~~~a~~~~~~aE~~l-~~sgi~~tiiRPg~l~~~~~ 241 (306)
.+.+++++.++++||++||..++.+..... ......+...|..+|.++ +..++++++|||+++.....
T Consensus 79 ~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~~~~e~~~~~~~~Y~~sK~~~e~~~~~~~~i~~~ilrp~~v~g~~~ 158 (219)
T 3dqp_A 79 LKVDLYGAVKLMQAAEKAEVKRFILLSTIFSLQPEKWIGAGFDALKDYYIAKHFADLYLTKETNLDYTIIQPGALTEEEA 158 (219)
T ss_dssp CCCCCHHHHHHHHHHHHTTCCEEEEECCTTTTCGGGCCSHHHHHTHHHHHHHHHHHHHHHHSCCCEEEEEEECSEECSCC
T ss_pred EeEeHHHHHHHHHHHHHhCCCEEEEECcccccCCCcccccccccccHHHHHHHHHHHHHHhccCCcEEEEeCceEecCCC
Confidence 156677888999999999988775432200 000122344567788888 77899999999999875543
Q ss_pred CCcceeeecCCCCccccCHHHHHHHHHHHhhCCCCCCcEEEEecCCcCHHHHHH
Q 021854 242 GKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVVNGEEKVSDWKK 295 (306)
Q Consensus 242 ~~~~~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~~~g~~~~v~~g~~s~~d~~~ 295 (306)
.+. +. .++....+++++|+|++++.++.++...+++|++.+++.+++|+.+
T Consensus 159 ~~~-~~--~~~~~~~~i~~~Dva~~i~~~l~~~~~~g~~~~i~~g~~~~~e~~~ 209 (219)
T 3dqp_A 159 TGL-ID--INDEVSASNTIGDVADTIKELVMTDHSIGKVISMHNGKTAIKEALE 209 (219)
T ss_dssp CSE-EE--ESSSCCCCEEHHHHHHHHHHHHTCGGGTTEEEEEEECSEEHHHHHH
T ss_pred CCc-cc--cCCCcCCcccHHHHHHHHHHHHhCccccCcEEEeCCCCccHHHHHH
Confidence 322 22 3466688999999999999999988777999999999888777654
|
| >3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=99.95 E-value=5.1e-27 Score=206.99 Aligned_cols=200 Identities=16% Similarity=0.204 Sum_probs=154.6
Q ss_pred CccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCc-eeeeccCCCHHHHHHHhcCccEEEEcCCc
Q 021854 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYV-ESMAGDASNKKFLKTALRGVRSIICPSEG 173 (306)
Q Consensus 95 ~~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v-~~v~~D~~d~~~l~~~~~~~d~vi~~~~g 173 (306)
...++|+|+||||||+||++++++|+++|++|++++|+.++.......++ +++.+|++ +.+.+++.++|+|||+++.
T Consensus 17 ~~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~Dl~--~~~~~~~~~~D~vi~~ag~ 94 (236)
T 3e8x_A 17 LYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRERGASDIVVANLE--EDFSHAFASIDAVVFAAGS 94 (236)
T ss_dssp ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHTTCSEEEECCTT--SCCGGGGTTCSEEEECCCC
T ss_pred cCcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHhCCCceEEEcccH--HHHHHHHcCCCEEEECCCC
Confidence 34568999999999999999999999999999999999988665544578 99999999 7888899999999998441
Q ss_pred ------------------hhhhcccccCCCEEEEecCcccccCCCCcccccchHHHHHHHHHHHHHHhcCCCEEEEEcCc
Q 021854 174 ------------------FISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMASGIPYTIIRTGV 235 (306)
Q Consensus 174 ------------------~~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~~~~~aE~~l~~sgi~~tiiRPg~ 235 (306)
.+.+++++.+++|||++||.++..+.... .....+...|..+|.+++..++++++||||+
T Consensus 95 ~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~~~~--~~~~~Y~~sK~~~e~~~~~~gi~~~~lrpg~ 172 (236)
T 3e8x_A 95 GPHTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSSVGTVDPDQGP--MNMRHYLVAKRLADDELKRSSLDYTIVRPGP 172 (236)
T ss_dssp CTTSCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECCTTCSCGGGSC--GGGHHHHHHHHHHHHHHHHSSSEEEEEEECS
T ss_pred CCCCCccccchhhHHHHHHHHHHHHHcCCCEEEEEecCCCCCCCCCh--hhhhhHHHHHHHHHHHHHHCCCCEEEEeCCc
Confidence 14566777899999999998776542111 1112234456778899999999999999999
Q ss_pred ccCCCCCCcceeeecCCCCccccCHHHHHHHHHHHhhCCCCCCcEEEEecCCcCHHHHHHHHH
Q 021854 236 LQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVVNGEEKVSDWKKCFS 298 (306)
Q Consensus 236 l~~~~~~~~~~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~~~g~~~~v~~g~~s~~d~~~l~~ 298 (306)
+..............+.....+++++|+|++++.+++++...+++|++.+++.++.|+.+.++
T Consensus 173 v~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~v~~~~~~~~e~~~~i~ 235 (236)
T 3e8x_A 173 LSNEESTGKVTVSPHFSEITRSITRHDVAKVIAELVDQQHTIGKTFEVLNGDTPIAKVVEQLG 235 (236)
T ss_dssp EECSCCCSEEEEESSCSCCCCCEEHHHHHHHHHHHTTCGGGTTEEEEEEECSEEHHHHHHTC-
T ss_pred ccCCCCCCeEEeccCCCcccCcEeHHHHHHHHHHHhcCccccCCeEEEeCCCcCHHHHHHHhc
Confidence 775544333222334444578999999999999999988778999999999888888776553
|
| >1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=7.3e-26 Score=199.95 Aligned_cols=205 Identities=23% Similarity=0.374 Sum_probs=158.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHC--CCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcCCch-
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVK--RTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEGF- 174 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~--g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~g~- 174 (306)
++++|+||||+|+||++++++|+++ |++|++++|++++.... +.+++++.+|++|.+++.++++++|+|||+++..
T Consensus 3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a~~~~ 81 (253)
T 1xq6_A 3 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI-GGEADVFIGDITDADSINPAFQGIDALVILTSAVP 81 (253)
T ss_dssp SCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHT-TCCTTEEECCTTSHHHHHHHHTTCSEEEECCCCCC
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhc-CCCeeEEEecCCCHHHHHHHHcCCCEEEEeccccc
Confidence 4689999999999999999999999 89999999998765433 4578899999999999999999999999983310
Q ss_pred ----------------------------------hhhcccccCCCEEEEecCcccccCCCCcccccchHHHHHHHHHHHH
Q 021854 175 ----------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESM 220 (306)
Q Consensus 175 ----------------------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~~~~~aE~~ 220 (306)
+.+++++.++++||++||.+++.+..+...|....+...|..+|.+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~y~~sK~~~e~~ 161 (253)
T 1xq6_A 82 KMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGSMGGTNPDHPLNKLGNGNILVWKRKAEQY 161 (253)
T ss_dssp EECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEETTTTCTTCGGGGGGGCCHHHHHHHHHHH
T ss_pred cccccccccccccchhhccccccceeeeHHHHHHHHHHHHHcCCCEEEEEcCccCCCCCCccccccchhHHHHHHHHHHH
Confidence 2244566789999999999887655444455433344457788999
Q ss_pred HHhcCCCEEEEEcCcccCCCCCCcceeeecCC----CCccccCHHHHHHHHHHHhhCCCCCCcEEEEecCC----cCHHH
Q 021854 221 LMASGIPYTIIRTGVLQNTPGGKQGFQFEEGC----AANGSLSKEDAAFICVEALESIPQTGLIFEVVNGE----EKVSD 292 (306)
Q Consensus 221 l~~sgi~~tiiRPg~l~~~~~~~~~~~~~~g~----~~~~~Is~~DVA~~iv~aL~~~~~~g~~~~v~~g~----~s~~d 292 (306)
+++.++++++||||++................ ....+++++|+|++++.+++++...+++|++++++ .++.|
T Consensus 162 ~~~~~i~~~~vrpg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dva~~~~~~~~~~~~~g~~~~i~~~~~~~~~s~~e 241 (253)
T 1xq6_A 162 LADSGTPYTIIRAGGLLDKEGGVRELLVGKDDELLQTDTKTVPRADVAEVCIQALLFEEAKNKAFDLGSKPEGTSTPTKD 241 (253)
T ss_dssp HHTSSSCEEEEEECEEECSCSSSSCEEEESTTGGGGSSCCEEEHHHHHHHHHHHTTCGGGTTEEEEEEECCTTTSCCCCC
T ss_pred HHhCCCceEEEecceeecCCcchhhhhccCCcCCcCCCCcEEcHHHHHHHHHHHHcCccccCCEEEecCCCcCCCCCHHH
Confidence 99999999999999976443322222221111 12457999999999999998876678899999864 57889
Q ss_pred HHHHHHHHhhh
Q 021854 293 WKKCFSRLMEK 303 (306)
Q Consensus 293 ~~~l~~~l~~~ 303 (306)
+.+++.++.++
T Consensus 242 ~~~~~~~~~g~ 252 (253)
T 1xq6_A 242 FKALFSQVTSR 252 (253)
T ss_dssp HHHHHHTCCCC
T ss_pred HHHHHHHHhCC
Confidence 99998877665
|
| >3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.94 E-value=3.9e-26 Score=206.85 Aligned_cols=197 Identities=14% Similarity=0.189 Sum_probs=157.5
Q ss_pred CeEEEEcCCChHHHHHHHHHHHC-CCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcCCc-----
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVK-RTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG----- 173 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~-g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~g----- 173 (306)
|+||||||||+||++++++|++. |++|++++|++++.....+.+++++.+|+.|.+++.++++++|+|||+++.
T Consensus 1 M~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~~~~~v~~~~~D~~d~~~l~~~~~~~d~vi~~a~~~~~~~ 80 (289)
T 3e48_A 1 MNIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDWRGKVSVRQLDYFNQESMVEAFKGMDTVVFIPSIIHPSF 80 (289)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGGGBTTBEEEECCTTCHHHHHHHTTTCSEEEECCCCCCSHH
T ss_pred CEEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHhhhCCCEEEEcCCCCHHHHHHHHhCCCEEEEeCCCCccch
Confidence 57999999999999999999998 999999999998866655678999999999999999999999999998442
Q ss_pred -------hhhhcccccCCCEEEEecCcccccCCCCcccccchHHHHHHHHHHHHHHhcCCCEEEEEcCcccCCCC-----
Q 021854 174 -------FISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMASGIPYTIIRTGVLQNTPG----- 241 (306)
Q Consensus 174 -------~~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~~~~~aE~~l~~sgi~~tiiRPg~l~~~~~----- 241 (306)
.+++++++.+++|||++||.+..... .+.. ..+...+|..+++.+++|++|||+++.+...
T Consensus 81 ~~~~~~~~l~~aa~~~gv~~iv~~Ss~~~~~~~----~~~~---~~~~~~~e~~~~~~g~~~~ilrp~~~~~~~~~~~~~ 153 (289)
T 3e48_A 81 KRIPEVENLVYAAKQSGVAHIIFIGYYADQHNN----PFHM---SPYFGYASRLLSTSGIDYTYVRMAMYMDPLKPYLPE 153 (289)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEEEEESCCSTTC----CSTT---HHHHHHHHHHHHHHCCEEEEEEECEESTTHHHHHHH
T ss_pred hhHHHHHHHHHHHHHcCCCEEEEEcccCCCCCC----CCcc---chhHHHHHHHHHHcCCCEEEEeccccccccHHHHHH
Confidence 15677888999999999997643221 1111 1223467888889999999999999764321
Q ss_pred --CCcceeeecCCCCccccCHHHHHHHHHHHhhCCCCCCcEEEEecCC-cCHHHHHHHHHHHhhhc
Q 021854 242 --GKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVVNGE-EKVSDWKKCFSRLMEKT 304 (306)
Q Consensus 242 --~~~~~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~~~g~~~~v~~g~-~s~~d~~~l~~~l~~~~ 304 (306)
......++.++....+++++|+|++++.++.++...+++|+++ ++ .++.|+.+++.++.+++
T Consensus 154 ~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~g~~~~~~-~~~~s~~e~~~~~~~~~g~~ 218 (289)
T 3e48_A 154 LMNMHKLIYPAGDGRINYITRNDIARGVIAIIKNPDTWGKRYLLS-GYSYDMKELAAILSEASGTE 218 (289)
T ss_dssp HHHHTEECCCCTTCEEEEECHHHHHHHHHHHHHCGGGTTCEEEEC-CEEEEHHHHHHHHHHHHTSC
T ss_pred HHHCCCEecCCCCceeeeEEHHHHHHHHHHHHcCCCcCCceEEeC-CCcCCHHHHHHHHHHHHCCc
Confidence 1112233456666789999999999999999887668999999 55 58999999999988764
|
| >3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=99.94 E-value=1.4e-25 Score=198.18 Aligned_cols=192 Identities=18% Similarity=0.222 Sum_probs=143.7
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCC-CeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcCCch
Q 021854 96 EEARDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEGF 174 (306)
Q Consensus 96 ~~~~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~g~ 174 (306)
..++|+|+||||+|+||++++++|+++| ++|++++|++++.......+++++.+|++|.++++++++++|+|||+++..
T Consensus 20 ~~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vv~~a~~~ 99 (236)
T 3qvo_A 20 QGHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPYPTNSQIIMGDVLNHAALKQAMQGQDIVYANLTGE 99 (236)
T ss_dssp --CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSSCCTTEEEEECCTTCHHHHHHHHTTCSEEEEECCST
T ss_pred cCcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhcccccCCcEEEEecCCCHHHHHHHhcCCCEEEEcCCCC
Confidence 3456899999999999999999999999 899999999988766566689999999999999999999999999885432
Q ss_pred --------hhhcccccCCCEEEEecCcccccCCCCcccccc----hHHHHHHHHHHHHHHhcCCCEEEEEcCcccCCCCC
Q 021854 175 --------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMK----GNARKLAEQDESMLMASGIPYTIIRTGVLQNTPGG 242 (306)
Q Consensus 175 --------~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~----~~a~~~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~ 242 (306)
+.+++++.++++||++||..++........+.. ......+..+|.+++..++++++||||++.+....
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~iV~iSS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~vrPg~i~~~~~~ 179 (236)
T 3qvo_A 100 DLDIQANSVIAAMKACDVKRLIFVLSLGIYDEVPGKFVEWNNAVIGEPLKPFRRAADAIEASGLEYTILRPAWLTDEDII 179 (236)
T ss_dssp THHHHHHHHHHHHHHTTCCEEEEECCCCC----------------CGGGHHHHHHHHHHHTSCSEEEEEEECEEECCSCC
T ss_pred chhHHHHHHHHHHHHcCCCEEEEEecceecCCCCcccccchhhcccchHHHHHHHHHHHHHCCCCEEEEeCCcccCCCCc
Confidence 456678889999999999988765332211100 01122344567888899999999999998755433
Q ss_pred CcceeeecCCCC-ccccCHHHHHHHHHHHhhCCC-CCCcEEEEecCCc
Q 021854 243 KQGFQFEEGCAA-NGSLSKEDAAFICVEALESIP-QTGLIFEVVNGEE 288 (306)
Q Consensus 243 ~~~~~~~~g~~~-~~~Is~~DVA~~iv~aL~~~~-~~g~~~~v~~g~~ 288 (306)
.... ...+... ..+++++|||++++.++.++. ..+++|+++++..
T Consensus 180 ~~~~-~~~~~~~~~~~i~~~DvA~~i~~ll~~~~~~~g~~~~i~~~~~ 226 (236)
T 3qvo_A 180 DYEL-TSRNEPFKGTIVSRKSVAALITDIIDKPEKHIGENIGINQPGT 226 (236)
T ss_dssp CCEE-ECTTSCCSCSEEEHHHHHHHHHHHHHSTTTTTTEEEEEECSSC
T ss_pred ceEE-eccCCCCCCcEECHHHHHHHHHHHHcCcccccCeeEEecCCCC
Confidence 2212 2122222 346899999999999999887 6789999998764
|
| >1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=6.9e-25 Score=188.05 Aligned_cols=187 Identities=12% Similarity=0.106 Sum_probs=145.5
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcCCc-----
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG----- 173 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~g----- 173 (306)
.|+|+||||+|+||++++++|+++|++|++++|++++.......+++++.+|+.|.+++.++++++|+|||+++.
T Consensus 3 ~~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~~~~~~ 82 (206)
T 1hdo_A 3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAADVDKTVAGQDAVIVLLGTRNDLS 82 (206)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSSCCCSEEEESCTTSHHHHHHHHTTCSEEEECCCCTTCCS
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhcccccCCceEEEEecCCCHHHHHHHHcCCCEEEECccCCCCCC
Confidence 379999999999999999999999999999999987754433567999999999999999999999999998431
Q ss_pred ----------hhhhcccccCCCEEEEecCcccccCCCCcccccchHHHHHHHHHHHHHHhcCCCEEEEEcCcccCCCCCC
Q 021854 174 ----------FISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMASGIPYTIIRTGVLQNTPGGK 243 (306)
Q Consensus 174 ----------~~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~ 243 (306)
.+.+++.+.++++||++||.+++........ ....+...|..+|.++++.+++++++||+++.+.+...
T Consensus 83 ~~~~n~~~~~~~~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~-~~~~y~~~K~~~e~~~~~~~i~~~~lrp~~~~~~~~~~ 161 (206)
T 1hdo_A 83 PTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTKVPP-RLQAVTDDHIRMHKVLRESGLKYVAVMPPHIGDQPLTG 161 (206)
T ss_dssp CCCHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCTTCSCG-GGHHHHHHHHHHHHHHHHTCSEEEEECCSEEECCCCCS
T ss_pred ccchHHHHHHHHHHHHHHhCCCeEEEEeeeeeccCcccccc-cchhHHHHHHHHHHHHHhCCCCEEEEeCCcccCCCCCc
Confidence 1445677789999999999988764432110 11223445677888999999999999999975443322
Q ss_pred cceeeecCCCC-ccccCHHHHHHHHHHHhhCCCCCCcEEEEecCC
Q 021854 244 QGFQFEEGCAA-NGSLSKEDAAFICVEALESIPQTGLIFEVVNGE 287 (306)
Q Consensus 244 ~~~~~~~g~~~-~~~Is~~DVA~~iv~aL~~~~~~g~~~~v~~g~ 287 (306)
. +....+... ..+++++|+|++++.+++++...+++|++.++.
T Consensus 162 ~-~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~g~ 205 (206)
T 1hdo_A 162 A-YTVTLDGRGPSRVISKHDLGHFMLRCLTTDEYDGHSTYPSHQY 205 (206)
T ss_dssp C-CEEESSSCSSCSEEEHHHHHHHHHHTTSCSTTTTCEEEEECCC
T ss_pred c-eEecccCCCCCCccCHHHHHHHHHHHhcCccccccceeeeccc
Confidence 2 211122222 578999999999999999887778999999874
|
| >2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D | Back alignment and structure |
|---|
Probab=99.94 E-value=1.2e-25 Score=203.17 Aligned_cols=197 Identities=19% Similarity=0.256 Sum_probs=157.8
Q ss_pred CeEEEEcCCChHHHHHHHHHHHC--CCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcCCc----
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVK--RTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG---- 173 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~--g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~g---- 173 (306)
|+|+||||||+||++++++|+++ |++|++++|+.++.......+++++.+|++|.+++.++++++|+|||+++.
T Consensus 1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~~~~~~ 80 (287)
T 2jl1_A 1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLADQGVEVRHGDYNQPESLQKAFAGVSKLLFISGPHYDN 80 (287)
T ss_dssp CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHHHTTCEEEECCTTCHHHHHHHTTTCSEEEECCCCCSCH
T ss_pred CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHhhcCCeEEEeccCCHHHHHHHHhcCCEEEEcCCCCcCc
Confidence 57999999999999999999998 999999999987655443457899999999999999999999999998442
Q ss_pred --------hhhhcccccCCCEEEEecCcccccCCCCcccccchHHHHHHHHHHHHHHhcCCCEEEEEcCcccCCC-CC--
Q 021854 174 --------FISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMASGIPYTIIRTGVLQNTP-GG-- 242 (306)
Q Consensus 174 --------~~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~~~~~aE~~l~~sgi~~tiiRPg~l~~~~-~~-- 242 (306)
.+.+++++.+++|||++||.+++... ..| ...|..+|.++++.+++++++||+++.+.. ..
T Consensus 81 ~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~~~---~~y-----~~~K~~~E~~~~~~~~~~~ilrp~~~~~~~~~~~~ 152 (287)
T 2jl1_A 81 TLLIVQHANVVKAARDAGVKHIAYTGYAFAEESI---IPL-----AHVHLATEYAIRTTNIPYTFLRNALYTDFFVNEGL 152 (287)
T ss_dssp HHHHHHHHHHHHHHHHTTCSEEEEEEETTGGGCC---STH-----HHHHHHHHHHHHHTTCCEEEEEECCBHHHHSSGGG
T ss_pred hHHHHHHHHHHHHHHHcCCCEEEEECCCCCCCCC---Cch-----HHHHHHHHHHHHHcCCCeEEEECCEeccccchhhH
Confidence 14566778899999999998876321 123 334677899999999999999999865322 10
Q ss_pred -----CcceeeecCCCCccccCHHHHHHHHHHHhhCCCCCCcEEEEecC-CcCHHHHHHHHHHHhhhc
Q 021854 243 -----KQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVVNG-EEKVSDWKKCFSRLMEKT 304 (306)
Q Consensus 243 -----~~~~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~~~g~~~~v~~g-~~s~~d~~~l~~~l~~~~ 304 (306)
.....+..++....+++++|+|++++.+++++...+++|+++++ +.++.|+.+++.++.++.
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~ 220 (287)
T 2jl1_A 153 RASTESGAIVTNAGSGIVNSVTRNELALAAATVLTEEGHENKTYNLVSNQPWTFDELAQILSEVSGKK 220 (287)
T ss_dssp HHHHHHTEEEESCTTCCBCCBCHHHHHHHHHHHHTSSSCTTEEEEECCSSCBCHHHHHHHHHHHHSSC
T ss_pred HHHhhCCceeccCCCCccCccCHHHHHHHHHHHhcCCCCCCcEEEecCCCcCCHHHHHHHHHHHHCCc
Confidence 11122345666678999999999999999887667889999987 469999999999887653
|
| >2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=2.4e-25 Score=200.78 Aligned_cols=196 Identities=21% Similarity=0.266 Sum_probs=156.4
Q ss_pred eEEEEcCCChHHHHHHHHHHHC--CCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcCCc-----
Q 021854 101 AVLVTDGDSDIGQMVILSLIVK--RTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG----- 173 (306)
Q Consensus 101 ~ilVtGatG~iG~~l~~~L~~~--g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~g----- 173 (306)
+|+||||+|+||++++++|+++ |++|++++|++++.......+++++.+|++|.+++.++++++|+|||+++.
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a~~~~~~~ 80 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAAQGITVRQADYGDEAALTSALQGVEKLLLISSSEVGQR 80 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHHHTTCEEEECCTTCHHHHHHHTTTCSEEEECC-------
T ss_pred CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhhcCCCeEEEcCCCCHHHHHHHHhCCCEEEEeCCCCchHH
Confidence 5899999999999999999998 999999999987654433457899999999999999999999999998432
Q ss_pred -----hhhhcccccCCCEEEEecCcccccCCCCcccccchHHHHHHHHHHHHHHhcCCCEEEEEcCcccCCCC-------
Q 021854 174 -----FISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMASGIPYTIIRTGVLQNTPG------- 241 (306)
Q Consensus 174 -----~~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~~~~~aE~~l~~sgi~~tiiRPg~l~~~~~------- 241 (306)
.+.+++++.+++|||++||.+++.. ...| ...|..+|.++++.+++++++||+++.+...
T Consensus 81 ~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~~---~~~y-----~~sK~~~e~~~~~~~~~~~ilrp~~~~~~~~~~~~~~~ 152 (286)
T 2zcu_A 81 APQHRNVINAAKAAGVKFIAYTSLLHADTS---PLGL-----ADEHIETEKMLADSGIVYTLLRNGWYSENYLASAPAAL 152 (286)
T ss_dssp -CHHHHHHHHHHHHTCCEEEEEEETTTTTC---CSTT-----HHHHHHHHHHHHHHCSEEEEEEECCBHHHHHTTHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEEECCCCCCCC---cchh-----HHHHHHHHHHHHHcCCCeEEEeChHHhhhhHHHhHHhh
Confidence 1556777889999999999988632 1233 2346678889988999999999998653211
Q ss_pred CCcceeeecCCCCccccCHHHHHHHHHHHhhCCCCCCcEEEEecC-CcCHHHHHHHHHHHhhhc
Q 021854 242 GKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVVNG-EEKVSDWKKCFSRLMEKT 304 (306)
Q Consensus 242 ~~~~~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~~~g~~~~v~~g-~~s~~d~~~l~~~l~~~~ 304 (306)
....+.++.++....+++++|+|++++.++.++...+++|+++++ ..++.|+.+++.++.++.
T Consensus 153 ~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~ 216 (286)
T 2zcu_A 153 EHGVFIGAAGDGKIASATRADYAAAAARVISEAGHEGKVYELAGDSAWTLTQLAAELTKQSGKQ 216 (286)
T ss_dssp HHTEEEESCTTCCBCCBCHHHHHHHHHHHHHSSSCTTCEEEECCSSCBCHHHHHHHHHHHHSSC
T ss_pred cCCceeccCCCCccccccHHHHHHHHHHHhcCCCCCCceEEEeCCCcCCHHHHHHHHHHHHCCC
Confidence 011233445566688999999999999999987667889999987 469999999999887653
|
| >2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.93 E-value=6.1e-25 Score=203.04 Aligned_cols=203 Identities=12% Similarity=0.057 Sum_probs=151.9
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcCCc-----
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG----- 173 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~g----- 173 (306)
+|+||||||+|+||++++++|+++|++|++++|+.++.......+++++.+|+.|.+++.++++++|+|||+++.
T Consensus 13 ~M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~a~~~~~~~ 92 (342)
T 2x4g_A 13 HVKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRLAYLEPECRVAEMLDHAGLERALRGLDGVIFSAGYYPSRP 92 (342)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGGGGGCCEEEECCTTCHHHHHHHTTTCSEEEEC--------
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhhhccCCeEEEEecCCCHHHHHHHHcCCCEEEECCccCcCCC
Confidence 469999999999999999999999999999999987654333337899999999999999999999999998431
Q ss_pred ---------------hhhhcccccCCCEEEEecCcccccCCCCc------cccc-----chHHHHHHHHHHHHHHh---c
Q 021854 174 ---------------FISNAGSLKGVQHVILLSQLSVYRGSGGI------QALM-----KGNARKLAEQDESMLMA---S 224 (306)
Q Consensus 174 ---------------~~~~~a~~~gvkr~V~iSS~~~~~~~~~~------~~~~-----~~~a~~~~~~aE~~l~~---s 224 (306)
.+.+++.+.+++|||++||.+++...... .... ...+...|..+|.+++. .
T Consensus 93 ~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~E~~~~~p~~~~~~~Y~~sK~~~e~~~~~~~~~ 172 (342)
T 2x4g_A 93 RRWQEEVASALGQTNPFYAACLQARVPRILYVGSAYAMPRHPQGLPGHEGLFYDSLPSGKSSYVLCKWALDEQAREQARN 172 (342)
T ss_dssp ----CHHHHHHHHHHHHHHHHHHHTCSCEEEECCGGGSCCCTTSSCBCTTCCCSSCCTTSCHHHHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHhhCcCCCCCCCCCCCCCCccccccChHHHHHHHHHHHHHHHhhc
Confidence 14456777899999999999887643320 0000 11233345566766654 3
Q ss_pred CCCEEEEEcCcccCCCC-C------------CcceeeecCCCCccccCHHHHHHHHHHHhhCCCCCCcEEEEecCCcCHH
Q 021854 225 GIPYTIIRTGVLQNTPG-G------------KQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVVNGEEKVS 291 (306)
Q Consensus 225 gi~~tiiRPg~l~~~~~-~------------~~~~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~~~g~~~~v~~g~~s~~ 291 (306)
++++++|||+++..... . +....+ ++....+++++|+|++++.+++++.. +++|+++++..++.
T Consensus 173 g~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~v~Dva~~~~~~~~~~~~-g~~~~v~~~~~s~~ 249 (342)
T 2x4g_A 173 GLPVVIGIPGMVLGELDIGPTTGRVITAIGNGEMTHY--VAGQRNVIDAAEAGRGLLMALERGRI-GERYLLTGHNLEMA 249 (342)
T ss_dssp TCCEEEEEECEEECSCCSSCSTTHHHHHHHTTCCCEE--ECCEEEEEEHHHHHHHHHHHHHHSCT-TCEEEECCEEEEHH
T ss_pred CCcEEEEeCCceECCCCccccHHHHHHHHHcCCCccc--cCCCcceeeHHHHHHHHHHHHhCCCC-CceEEEcCCcccHH
Confidence 99999999999653221 1 111111 34456789999999999999987665 88999999778899
Q ss_pred HHHHHHHHHhhhc
Q 021854 292 DWKKCFSRLMEKT 304 (306)
Q Consensus 292 d~~~l~~~l~~~~ 304 (306)
|+.+++.++.+..
T Consensus 250 e~~~~i~~~~g~~ 262 (342)
T 2x4g_A 250 DLTRRIAELLGQP 262 (342)
T ss_dssp HHHHHHHHHHTCC
T ss_pred HHHHHHHHHhCCC
Confidence 9999998887653
|
| >3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.5e-24 Score=198.55 Aligned_cols=202 Identities=16% Similarity=0.109 Sum_probs=152.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcCCc----
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG---- 173 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~g---- 173 (306)
|+|+||||||+|+||++++++|+++|++|++++|+..... .. +++++.+|+. .+.+.++++++|+|||+++.
T Consensus 1 M~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~--~~-~~~~~~~Dl~-~~~~~~~~~~~d~Vih~a~~~~~~ 76 (311)
T 3m2p_A 1 MSLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKA--IN-DYEYRVSDYT-LEDLINQLNDVDAVVHLAATRGSQ 76 (311)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC--------CCEEEECCCC-HHHHHHHTTTCSEEEECCCCCCSS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc--CC-ceEEEEcccc-HHHHHHhhcCCCEEEEccccCCCC
Confidence 4689999999999999999999999999999999944332 22 7899999999 99999999999999998431
Q ss_pred --------------hhhhcccccCCCEEEEecCcccccCCCCcc-----c-ccchHHHHHHHHHHHHHHh----cCCCEE
Q 021854 174 --------------FISNAGSLKGVQHVILLSQLSVYRGSGGIQ-----A-LMKGNARKLAEQDESMLMA----SGIPYT 229 (306)
Q Consensus 174 --------------~~~~~a~~~gvkr~V~iSS~~~~~~~~~~~-----~-~~~~~a~~~~~~aE~~l~~----sgi~~t 229 (306)
.+.+++.+.+++|||++||.++|....... . .....+...|..+|.++++ .+++++
T Consensus 77 ~~~~~~~~n~~~~~~ll~a~~~~~~~r~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~g~~~~ 156 (311)
T 3m2p_A 77 GKISEFHDNEILTQNLYDACYENNISNIVYASTISAYSDETSLPWNEKELPLPDLMYGVSKLACEHIGNIYSRKKGLCIK 156 (311)
T ss_dssp SCGGGTHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCCGGGCSBCTTSCCCCSSHHHHHHHHHHHHHHHHHHHSCCEEE
T ss_pred ChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHhCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcCCCEE
Confidence 145677888999999999988875422100 0 0011233445566766654 799999
Q ss_pred EEEcCcccCCCCC--------------Ccceee-ecCCCCccccCHHHHHHHHHHHhhCCCCCCcEEEEecCC-cCHHHH
Q 021854 230 IIRTGVLQNTPGG--------------KQGFQF-EEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVVNGE-EKVSDW 293 (306)
Q Consensus 230 iiRPg~l~~~~~~--------------~~~~~~-~~g~~~~~~Is~~DVA~~iv~aL~~~~~~g~~~~v~~g~-~s~~d~ 293 (306)
++||+.+...... +..+.+ +.++....+++++|+|++++.+++++. .+++|++++++ .++.|+
T Consensus 157 ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~v~Dva~a~~~~~~~~~-~~~~~~i~~~~~~s~~e~ 235 (311)
T 3m2p_A 157 NLRFAHLYGFNEKNNYMINRFFRQAFHGEQLTLHANSVAKREFLYAKDAAKSVIYALKQEK-VSGTFNIGSGDALTNYEV 235 (311)
T ss_dssp EEEECEEECSCC--CCHHHHHHHHHHTCCCEEESSBCCCCEEEEEHHHHHHHHHHHTTCTT-CCEEEEECCSCEECHHHH
T ss_pred EEeeCceeCcCCCCCCHHHHHHHHHHcCCCeEEecCCCeEEceEEHHHHHHHHHHHHhcCC-CCCeEEeCCCCcccHHHH
Confidence 9999996533211 222333 456666789999999999999998876 68899999866 589999
Q ss_pred HHHHHHHhhhc
Q 021854 294 KKCFSRLMEKT 304 (306)
Q Consensus 294 ~~l~~~l~~~~ 304 (306)
.+++.+..+..
T Consensus 236 ~~~i~~~~g~~ 246 (311)
T 3m2p_A 236 ANTINNAFGNK 246 (311)
T ss_dssp HHHHHHHTTCT
T ss_pred HHHHHHHhCCC
Confidence 99999887654
|
| >3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=1.6e-24 Score=201.37 Aligned_cols=208 Identities=11% Similarity=0.040 Sum_probs=155.7
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh-------cC----CCceeeeccCCCHHHHHHHhcCc
Q 021854 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------FG----TYVESMAGDASNKKFLKTALRGV 164 (306)
Q Consensus 96 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~-------~~----~~v~~v~~D~~d~~~l~~~~~~~ 164 (306)
..++|+||||||||+||++++++|+++|++|++++|........ .+ .+++++.+|+.|.+.+.++++++
T Consensus 22 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~ 101 (351)
T 3ruf_A 22 IFSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMKGV 101 (351)
T ss_dssp HHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTTTC
T ss_pred CCCCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhcCC
Confidence 34579999999999999999999999999999999977542111 11 57899999999999999999999
Q ss_pred cEEEEcCCc----------------------hhhhcccccCCCEEEEecCcccccCCCCcc------cccchHHHHHHHH
Q 021854 165 RSIICPSEG----------------------FISNAGSLKGVQHVILLSQLSVYRGSGGIQ------ALMKGNARKLAEQ 216 (306)
Q Consensus 165 d~vi~~~~g----------------------~~~~~a~~~gvkr~V~iSS~~~~~~~~~~~------~~~~~~a~~~~~~ 216 (306)
|+|||+++. .+++++.+.++++|||+||.++|....... ......+...|..
T Consensus 102 d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~ 181 (351)
T 3ruf_A 102 DHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQSFTYAASSSTYGDHPALPKVEENIGNPLSPYAVTKYV 181 (351)
T ss_dssp SEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSHHHHHHHH
T ss_pred CEEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEecHHhcCCCCCCCCccCCCCCCCChhHHHHHH
Confidence 999998541 045667788999999999999886432210 0001123334555
Q ss_pred HHHHHH----hcCCCEEEEEcCcccCCCCC------------------Ccce-eeecCCCCccccCHHHHHHHHHHHhhC
Q 021854 217 DESMLM----ASGIPYTIIRTGVLQNTPGG------------------KQGF-QFEEGCAANGSLSKEDAAFICVEALES 273 (306)
Q Consensus 217 aE~~l~----~sgi~~tiiRPg~l~~~~~~------------------~~~~-~~~~g~~~~~~Is~~DVA~~iv~aL~~ 273 (306)
+|.+++ +.+++++++||+.+...... +..+ .++.++....+++++|+|++++.++..
T Consensus 182 ~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~ 261 (351)
T 3ruf_A 182 NEIYAQVYARTYGFKTIGLRYFNVFGRRQDPNGAYAAVIPKWTAAMLKGDDVYINGDGETSRDFCYIDNVIQMNILSALA 261 (351)
T ss_dssp HHHHHHHHHHHHCCCCEEEEECSEESTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHhCCCEEEEeeCceeCcCCCCCcchhhHHHHHHHHHHcCCCcEEeCCCCeEEeeEEHHHHHHHHHHHHhh
Confidence 666554 46999999999986532211 1111 224455667899999999999999987
Q ss_pred -CCCCCcEEEEecCC-cCHHHHHHHHHHHhhh
Q 021854 274 -IPQTGLIFEVVNGE-EKVSDWKKCFSRLMEK 303 (306)
Q Consensus 274 -~~~~g~~~~v~~g~-~s~~d~~~l~~~l~~~ 303 (306)
+...+++|+++++. .++.|+.+++.++.++
T Consensus 262 ~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~ 293 (351)
T 3ruf_A 262 KDSAKDNIYNVAVGDRTTLNELSGYIYDELNL 293 (351)
T ss_dssp CGGGCSEEEEESCSCCEEHHHHHHHHHHHHHT
T ss_pred ccccCCCEEEeCCCCcccHHHHHHHHHHHhCc
Confidence 45678999999866 5899999999988876
|
| >3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=99.93 E-value=7.7e-25 Score=205.20 Aligned_cols=208 Identities=14% Similarity=0.131 Sum_probs=157.6
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHC-CCeEEEEecCcchhhhhcC-CCceeeeccCC-CHHHHHHHhcCccEEEEcCC
Q 021854 96 EEARDAVLVTDGDSDIGQMVILSLIVK-RTRIKALVKDKRNAMESFG-TYVESMAGDAS-NKKFLKTALRGVRSIICPSE 172 (306)
Q Consensus 96 ~~~~~~ilVtGatG~iG~~l~~~L~~~-g~~V~~l~R~~~~~~~~~~-~~v~~v~~D~~-d~~~l~~~~~~~d~vi~~~~ 172 (306)
..++|+||||||+|+||++++++|+++ |++|++++|+.++...... .+++++.+|++ |.+.+.++++++|+|||+++
T Consensus 21 ~m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~~d~~~~~~~~~~~d~Vih~A~ 100 (372)
T 3slg_A 21 SMKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVKHERMHFFEGDITINKEWVEYHVKKCDVILPLVA 100 (372)
T ss_dssp --CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGGSTTEEEEECCTTTCHHHHHHHHHHCSEEEECBC
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhccCCCeEEEeCccCCCHHHHHHHhccCCEEEEcCc
Confidence 345789999999999999999999998 9999999999877554433 58999999999 99999999999999999733
Q ss_pred c----------------------hhhhcccccCCCEEEEecCcccccCCCCcc------c-------ccchHHHHHHHHH
Q 021854 173 G----------------------FISNAGSLKGVQHVILLSQLSVYRGSGGIQ------A-------LMKGNARKLAEQD 217 (306)
Q Consensus 173 g----------------------~~~~~a~~~gvkr~V~iSS~~~~~~~~~~~------~-------~~~~~a~~~~~~a 217 (306)
. .+++++.+.+ +||||+||.++|....... . .....+...|..+
T Consensus 101 ~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~p~~~p~~~Y~~sK~~~ 179 (372)
T 3slg_A 101 IATPATYVKQPLRVFELDFEANLPIVRSAVKYG-KHLVFPSTSEVYGMCADEQFDPDASALTYGPINKPRWIYACSKQLM 179 (372)
T ss_dssp CCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHHT-CEEEEECCGGGGBSCCCSSBCTTTCCEEECCTTCTTHHHHHHHHHH
T ss_pred cccHHHHhhCHHHHHHHHHHHHHHHHHHHHHhC-CcEEEeCcHHHhCCCCCCCCCccccccccCCCCCCCCcHHHHHHHH
Confidence 1 1456677788 9999999998876422110 0 0011244456677
Q ss_pred HHHHHhc---CCCEEEEEcCcccCCCC----------------------CCcceee-ecCCCCccccCHHHHHHHHHHHh
Q 021854 218 ESMLMAS---GIPYTIIRTGVLQNTPG----------------------GKQGFQF-EEGCAANGSLSKEDAAFICVEAL 271 (306)
Q Consensus 218 E~~l~~s---gi~~tiiRPg~l~~~~~----------------------~~~~~~~-~~g~~~~~~Is~~DVA~~iv~aL 271 (306)
|.+++.. +++++++||+.+..... .+..+.+ +.++....+++++|+|++++.++
T Consensus 180 E~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~ 259 (372)
T 3slg_A 180 DRVIWGYGMEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGENISLVDGGSQKRAFTYVDDGISALMKII 259 (372)
T ss_dssp HHHHHHHHTTTCEEEEEEECSEECSSCCCTTCSBSCSCHHHHHHHHHHHHTCCEEEGGGGCCEEECEEHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCEEEEccccccCCCcccccccccccchHHHHHHHHHHcCCCcEEeCCCceEEEEEEHHHHHHHHHHHH
Confidence 8887764 99999999999643221 1122222 34555678999999999999999
Q ss_pred hCCC--CCCcEEEEec-C-CcCHHHHHHHHHHHhhhc
Q 021854 272 ESIP--QTGLIFEVVN-G-EEKVSDWKKCFSRLMEKT 304 (306)
Q Consensus 272 ~~~~--~~g~~~~v~~-g-~~s~~d~~~l~~~l~~~~ 304 (306)
+.+. ..+++|++++ + +.++.|+.+++.++.++.
T Consensus 260 ~~~~~~~~~~~~ni~~~~~~~s~~e~~~~i~~~~g~~ 296 (372)
T 3slg_A 260 ENSNGVATGKIYNIGNPNNNFSVRELANKMLELAAEF 296 (372)
T ss_dssp HCGGGTTTTEEEEECCTTCEEEHHHHHHHHHHHHHHC
T ss_pred hcccCcCCCceEEeCCCCCCccHHHHHHHHHHHhCCC
Confidence 9875 5789999999 4 468999999999887754
|
| >3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.1e-24 Score=190.47 Aligned_cols=188 Identities=13% Similarity=0.115 Sum_probs=139.7
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcCCch----
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEGF---- 174 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~g~---- 174 (306)
+|+|+||||+|+||++++++|+++|++|++++|++++.... ..+++++.+|++|.+++.++++++|+|||+++..
T Consensus 4 m~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a~~~~~~~ 82 (227)
T 3dhn_A 4 VKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIE-NEHLKVKKADVSSLDEVCEVCKGADAVISAFNPGWNNP 82 (227)
T ss_dssp CCEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCC-CTTEEEECCCTTCHHHHHHHHTTCSEEEECCCC-----
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhc-cCceEEEEecCCCHHHHHHHhcCCCEEEEeCcCCCCCh
Confidence 58999999999999999999999999999999998775432 3679999999999999999999999999984321
Q ss_pred ------------hhhcccccCCCEEEEecCcccccCCCCcc-----cccchHHHHHHHHHHHH---HH-hcCCCEEEEEc
Q 021854 175 ------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQ-----ALMKGNARKLAEQDESM---LM-ASGIPYTIIRT 233 (306)
Q Consensus 175 ------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~~-----~~~~~~a~~~~~~aE~~---l~-~sgi~~tiiRP 233 (306)
+.+++.+.+++|||++||.+++....... ......+...|..+|.+ +. +.+++++++||
T Consensus 83 ~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp 162 (227)
T 3dhn_A 83 DIYDETIKVYLTIIDGVKKAGVNRFLMVGGAGSLFIAPGLRLMDSGEVPENILPGVKALGEFYLNFLMKEKEIDWVFFSP 162 (227)
T ss_dssp -CCSHHHHHHHHHHHHHHHTTCSEEEEECCSTTSEEETTEEGGGTTCSCGGGHHHHHHHHHHHHHTGGGCCSSEEEEEEC
T ss_pred hHHHHHHHHHHHHHHHHHHhCCCEEEEeCChhhccCCCCCccccCCcchHHHHHHHHHHHHHHHHHHhhccCccEEEEeC
Confidence 45667788999999999988764322100 00011122334445533 33 57899999999
Q ss_pred Cccc-CCCCCCc-----ceeeecCCCCccccCHHHHHHHHHHHhhCCCCCCcEEEEecCCc
Q 021854 234 GVLQ-NTPGGKQ-----GFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVVNGEE 288 (306)
Q Consensus 234 g~l~-~~~~~~~-----~~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~~~g~~~~v~~g~~ 288 (306)
+++. +...... ...+..++ ...+++++|+|++++.+++++...|++|++++++.
T Consensus 163 ~~v~g~~~~~~~~~~~~~~~~~~~~-~~~~i~~~Dva~ai~~~l~~~~~~g~~~~~~~~~~ 222 (227)
T 3dhn_A 163 AADMRPGVRTGRYRLGKDDMIVDIV-GNSHISVEDYAAAMIDELEHPKHHQERFTIGYLEH 222 (227)
T ss_dssp CSEEESCCCCCCCEEESSBCCCCTT-SCCEEEHHHHHHHHHHHHHSCCCCSEEEEEECCSC
T ss_pred CcccCCCccccceeecCCCcccCCC-CCcEEeHHHHHHHHHHHHhCccccCcEEEEEeehh
Confidence 9954 3322111 11111122 26789999999999999999999999999998764
|
| >4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=1.3e-24 Score=201.61 Aligned_cols=205 Identities=16% Similarity=0.148 Sum_probs=151.1
Q ss_pred CCCccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcCC
Q 021854 93 EFPEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE 172 (306)
Q Consensus 93 ~~~~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~ 172 (306)
.....++|+||||||+|+||++++++|+++|++|++++|+.++ .+++++.+|+.|.+.+.++++++|+|||+++
T Consensus 13 ~~~~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~------~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A~ 86 (347)
T 4id9_A 13 GLVPRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG------TGGEEVVGSLEDGQALSDAIMGVSAVLHLGA 86 (347)
T ss_dssp --------CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS------SCCSEEESCTTCHHHHHHHHTTCSEEEECCC
T ss_pred cccccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC------CCccEEecCcCCHHHHHHHHhCCCEEEECCc
Confidence 3455668999999999999999999999999999999998855 5688999999999999999999999999843
Q ss_pred c--------------------hhhhcccccCCCEEEEecCcccccCC--CC--c---ccc-cchHHHHHHHHHHHHHH--
Q 021854 173 G--------------------FISNAGSLKGVQHVILLSQLSVYRGS--GG--I---QAL-MKGNARKLAEQDESMLM-- 222 (306)
Q Consensus 173 g--------------------~~~~~a~~~gvkr~V~iSS~~~~~~~--~~--~---~~~-~~~~a~~~~~~aE~~l~-- 222 (306)
. .+.+++.+.++++||++||.++|... .. . ... ....+...|..+|.+++
T Consensus 87 ~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~V~~SS~~vyg~~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~ 166 (347)
T 4id9_A 87 FMSWAPADRDRMFAVNVEGTRRLLDAASAAGVRRFVFASSGEVYPENRPEFLPVTEDHPLCPNSPYGLTKLLGEELVRFH 166 (347)
T ss_dssp CCCSSGGGHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGTTTTSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHH
T ss_pred ccCcchhhHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHHhCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHHH
Confidence 1 14566778899999999999887641 10 0 000 01123334556666654
Q ss_pred --hcCCCEEEEEcCccc-------------CCC-------------------------CCCcc-eeeecCCCCccc----
Q 021854 223 --ASGIPYTIIRTGVLQ-------------NTP-------------------------GGKQG-FQFEEGCAANGS---- 257 (306)
Q Consensus 223 --~sgi~~tiiRPg~l~-------------~~~-------------------------~~~~~-~~~~~g~~~~~~---- 257 (306)
+.+++++++||+++. ... ..+.. ..++.+.....+
T Consensus 167 ~~~~~~~~~ilRp~~v~~~~~~~~~~~~~~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 246 (347)
T 4id9_A 167 QRSGAMETVILRFSHTQDATELLDEDSFFSGPRFFLRPRIHQQQNFGNAAIAELLQSRDIGEPSHILARNENGRPFRMHI 246 (347)
T ss_dssp HHHSSSEEEEEEECEEECGGGTTCTTSSSHHHHHBHHHHHHHHHHHTCHHHHHHHHHHCCSSCCEEEEECTTCCBCEECE
T ss_pred HHhcCCceEEEccceEeecccccccccccCCCCcccccccccccccchhHHHHHHHHHHcCCCeEEeCCCCcccCCccCc
Confidence 468999999999865 100 01122 233455666777
Q ss_pred cCHHHHHHHHHHHhhCCCCCCcEEEEecCC-cCHHHHHHHHHHHhhh
Q 021854 258 LSKEDAAFICVEALESIPQTGLIFEVVNGE-EKVSDWKKCFSRLMEK 303 (306)
Q Consensus 258 Is~~DVA~~iv~aL~~~~~~g~~~~v~~g~-~s~~d~~~l~~~l~~~ 303 (306)
++++|+|++++.++.++...+++|+++++. .++.|+.+++.++.+.
T Consensus 247 i~v~Dva~ai~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~ 293 (347)
T 4id9_A 247 TDTRDMVAGILLALDHPEAAGGTFNLGADEPADFAALLPKIAALTGL 293 (347)
T ss_dssp EEHHHHHHHHHHHHHCGGGTTEEEEESCSSCEEHHHHHHHHHHHHCC
T ss_pred EeHHHHHHHHHHHhcCcccCCCeEEECCCCcccHHHHHHHHHHHhCC
Confidence 999999999999999886668899999876 5899999999888764
|
| >3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.9e-24 Score=195.25 Aligned_cols=200 Identities=13% Similarity=0.098 Sum_probs=154.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcCCc----
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG---- 173 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~g---- 173 (306)
|+|+|||||| |+||++++++|+++|++|++++|+.++.......+++++.+|+.|.+ ++++|+|||+++.
T Consensus 4 m~~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~-----~~~~d~vi~~a~~~~~~ 77 (286)
T 3ius_A 4 MTGTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRASGAEPLLWPGEEPS-----LDGVTHLLISTAPDSGG 77 (286)
T ss_dssp -CCEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHHTTEEEEESSSSCCC-----CTTCCEEEECCCCBTTB
T ss_pred CcCcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhhCCCeEEEecccccc-----cCCCCEEEECCCccccc
Confidence 5789999998 99999999999999999999999998765544567999999999943 7899999998432
Q ss_pred -----hhhhcccc--cCCCEEEEecCcccccCCCCcc-----c-ccchHHHHHHHHHHHHHHhc-CCCEEEEEcCcccCC
Q 021854 174 -----FISNAGSL--KGVQHVILLSQLSVYRGSGGIQ-----A-LMKGNARKLAEQDESMLMAS-GIPYTIIRTGVLQNT 239 (306)
Q Consensus 174 -----~~~~~a~~--~gvkr~V~iSS~~~~~~~~~~~-----~-~~~~~a~~~~~~aE~~l~~s-gi~~tiiRPg~l~~~ 239 (306)
.+.+++++ .+++||||+||.++|....... . .....+...|..+|.++++. +++++++||+++...
T Consensus 78 ~~~~~~l~~a~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~ilRp~~v~G~ 157 (286)
T 3ius_A 78 DPVLAALGDQIAARAAQFRWVGYLSTTAVYGDHDGAWVDETTPLTPTAARGRWRVMAEQQWQAVPNLPLHVFRLAGIYGP 157 (286)
T ss_dssp CHHHHHHHHHHHHTGGGCSEEEEEEEGGGGCCCTTCEECTTSCCCCCSHHHHHHHHHHHHHHHSTTCCEEEEEECEEEBT
T ss_pred cHHHHHHHHHHHhhcCCceEEEEeecceecCCCCCCCcCCCCCCCCCCHHHHHHHHHHHHHHhhcCCCEEEEeccceECC
Confidence 14566666 7899999999998886432210 0 00112445577889999887 999999999986532
Q ss_pred CC-------CCcceeeecCCCCccccCHHHHHHHHHHHhhCCCCCCcEEEEecCC-cCHHHHHHHHHHHhhhc
Q 021854 240 PG-------GKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVVNGE-EKVSDWKKCFSRLMEKT 304 (306)
Q Consensus 240 ~~-------~~~~~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~~~g~~~~v~~g~-~s~~d~~~l~~~l~~~~ 304 (306)
.. .+....+..++....+++++|+|++++.+++++. .+++|++++++ .++.|+.+++.++.+.+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~-~g~~~~i~~~~~~s~~e~~~~i~~~~g~~ 229 (286)
T 3ius_A 158 GRGPFSKLGKGGIRRIIKPGQVFSRIHVEDIAQVLAASMARPD-PGAVYNVCDDEPVPPQDVIAYAAELQGLP 229 (286)
T ss_dssp TBSSSTTSSSSCCCEEECTTCCBCEEEHHHHHHHHHHHHHSCC-TTCEEEECCSCCBCHHHHHHHHHHHHTCC
T ss_pred CchHHHHHhcCCccccCCCCcccceEEHHHHHHHHHHHHhCCC-CCCEEEEeCCCCccHHHHHHHHHHHcCCC
Confidence 21 2233334444556789999999999999999876 57899999876 68999999999887654
|
| >3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=1.9e-24 Score=188.68 Aligned_cols=190 Identities=16% Similarity=0.102 Sum_probs=145.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHHH-HCCCeEEEEecCcc-hhhhh--cCCCceeeeccCCCHHHHHHHhcCccEEEEcCCc
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLI-VKRTRIKALVKDKR-NAMES--FGTYVESMAGDASNKKFLKTALRGVRSIICPSEG 173 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~-~~g~~V~~l~R~~~-~~~~~--~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~g 173 (306)
|+++|+||||+|+||++++++|+ +.|++|+++.|+++ ++.+. ...+++++.+|++|.+++.++++++|+|||+++.
T Consensus 4 mmk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vv~~ag~ 83 (221)
T 3r6d_A 4 MYXYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEIIDHERVTVIEGSFQNPGXLEQAVTNAEVVFVGAME 83 (221)
T ss_dssp SCSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHHHTSTTEEEEECCTTCHHHHHHHHTTCSEEEESCCC
T ss_pred eEEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhccCCCceEEEECCCCCHHHHHHHHcCCCEEEEcCCC
Confidence 45679999999999999999999 89999999999988 75544 4568999999999999999999999999998554
Q ss_pred ------hhhhcccccCCCEEEEecCcccccCCCCccccc----ch-HHHHHHHHHHHHHHhcCCCEEEEEcCcccCCCCC
Q 021854 174 ------FISNAGSLKGVQHVILLSQLSVYRGSGGIQALM----KG-NARKLAEQDESMLMASGIPYTIIRTGVLQNTPGG 242 (306)
Q Consensus 174 ------~~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~----~~-~a~~~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~ 242 (306)
.+.+++++.+++|||++||..++.......... .. .+...|..+|.++++.+++|++||||++.+....
T Consensus 84 ~n~~~~~~~~~~~~~~~~~iv~iSs~~~~~~~~~~~~~~~~~~~~~~y~~~K~~~e~~~~~~~i~~~~vrpg~v~~~~~~ 163 (221)
T 3r6d_A 84 SGSDMASIVKALSRXNIRRVIGVSMAGLSGEFPVALEKWTFDNLPISYVQGERQARNVLRESNLNYTILRLTWLYNDPEX 163 (221)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEEEETTTTSCSCHHHHHHHHHTSCHHHHHHHHHHHHHHHHSCSEEEEEEECEEECCTTC
T ss_pred CChhHHHHHHHHHhcCCCeEEEEeeceecCCCCcccccccccccccHHHHHHHHHHHHHHhCCCCEEEEechhhcCCCCC
Confidence 255667788999999999998876533221000 00 2344577888999999999999999998755332
Q ss_pred CcceeeecCCCC-ccccCHHHHHHHHHHHh--hCCC-CCCcEEEEecCC
Q 021854 243 KQGFQFEEGCAA-NGSLSKEDAAFICVEAL--ESIP-QTGLIFEVVNGE 287 (306)
Q Consensus 243 ~~~~~~~~g~~~-~~~Is~~DVA~~iv~aL--~~~~-~~g~~~~v~~g~ 287 (306)
........+... ..+++++|||+++++++ .++. ..++.+.+.++.
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~~~~~~~~~~~~~~~i~~~~ 212 (221)
T 3r6d_A 164 TDYELIPEGAQFNDAQVSREAVVKAIFDILHAADETPFHRTSIGVGEPG 212 (221)
T ss_dssp CCCEEECTTSCCCCCEEEHHHHHHHHHHHHTCSCCGGGTTEEEEEECTT
T ss_pred cceeeccCCccCCCceeeHHHHHHHHHHHHHhcChhhhhcceeeecCCC
Confidence 221211122222 34799999999999999 7765 567888888654
|
| >2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A | Back alignment and structure |
|---|
Probab=99.92 E-value=6.3e-25 Score=200.01 Aligned_cols=203 Identities=14% Similarity=0.191 Sum_probs=156.1
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCC-CeEEEEecCcchh--hhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcCCc--
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNA--MESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG-- 173 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~l~R~~~~~--~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~g-- 173 (306)
+|+|+||||||+||++++++|+++| ++|++++|++++. ......+++++.+|+.|.+++.++++++|+|||+++.
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~~~l~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~~~~ 84 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRLQGAEVVQGDQDDQVIMELALNGAYATFIVTNYWE 84 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEECCCHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHHHHHHHCCCEEEEecCCCHHHHHHHHhcCCEEEEeCCCCc
Confidence 5899999999999999999999999 9999999998663 2222357899999999999999999999999998541
Q ss_pred ------------hhhhcccccCCCEEEEecCcccccCCCCcccccchHHHHHHHHHHHHHHhcCCCEEEEEcCcccCCCC
Q 021854 174 ------------FISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMASGIPYTIIRTGVLQNTPG 241 (306)
Q Consensus 174 ------------~~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~~~~~aE~~l~~sgi~~tiiRPg~l~~~~~ 241 (306)
.+.+++++.+++|||++|+.+++...... + ...+...|..+|.+++++++++++|||+++.+...
T Consensus 85 ~~~~~~~~~~~~~~~~aa~~~gv~~iv~~S~~~~~~~~~~~--~-~~~y~~sK~~~e~~~~~~gi~~~ilrp~~~~~~~~ 161 (299)
T 2wm3_A 85 SCSQEQEVKQGKLLADLARRLGLHYVVYSGLENIKKLTAGR--L-AAAHFDGKGEVEEYFRDIGVPMTSVRLPCYFENLL 161 (299)
T ss_dssp HTCHHHHHHHHHHHHHHHHHHTCSEEEECCCCCHHHHTTTS--C-CCHHHHHHHHHHHHHHHHTCCEEEEECCEEGGGGG
T ss_pred cccchHHHHHHHHHHHHHHHcCCCEEEEEcCccccccCCCc--c-cCchhhHHHHHHHHHHHCCCCEEEEeecHHhhhch
Confidence 14566778899999998887765422211 0 11223456788999999999999999998553211
Q ss_pred ---------CCcc--eeeecCCCCccccCHHHHHHHHHHHhhCCC-CCCcEEEEecCCcCHHHHHHHHHHHhhhc
Q 021854 242 ---------GKQG--FQFEEGCAANGSLSKEDAAFICVEALESIP-QTGLIFEVVNGEEKVSDWKKCFSRLMEKT 304 (306)
Q Consensus 242 ---------~~~~--~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~-~~g~~~~v~~g~~s~~d~~~l~~~l~~~~ 304 (306)
.+.. +.++.++....+++++|+|++++.++.++. ..+++|+++++..++.|+.+++.++.+++
T Consensus 162 ~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~~g~~~~~~g~~~s~~e~~~~~~~~~g~~ 236 (299)
T 2wm3_A 162 SHFLPQKAPDGKSYLLSLPTGDVPMDGMSVSDLGPVVLSLLKMPEKYVGQNIGLSTCRHTAEEYAALLTKHTRKV 236 (299)
T ss_dssp TTTCCEECTTSSSEEECCCCTTSCEEEECGGGHHHHHHHHHHSHHHHTTCEEECCSEEECHHHHHHHHHHHHSSC
T ss_pred hhcCCcccCCCCEEEEEecCCCCccceecHHHHHHHHHHHHcChhhhCCeEEEeeeccCCHHHHHHHHHHHHCCC
Confidence 1111 122345666789999999999999998753 46789999976679999999999887653
|
| >3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} | Back alignment and structure |
|---|
Probab=99.92 E-value=5.9e-24 Score=185.15 Aligned_cols=185 Identities=11% Similarity=0.076 Sum_probs=136.7
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcCCc------
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG------ 173 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~g------ 173 (306)
|+|+||||||+||++++++|+++|++|++++|+.++.....+.+++++.+|++|.+. +++.++|+|||+++.
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~D~~d~~~--~~~~~~d~vi~~ag~~~~~~~ 78 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRLGATVATLVKEPLVLTE--ADLDSVDAVVDALSVPWGSGR 78 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHTCTTSEEEECCGGGCCH--HHHTTCSEEEECCCCCTTSSC
T ss_pred CEEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecccccccccCCCceEEecccccccH--hhcccCCEEEECCccCCCcch
Confidence 579999999999999999999999999999999988776666789999999999877 889999999998432
Q ss_pred ---------hhhhcccccCCCEEEEecCcccccCCCCc---------ccccchHHHHHHHHHHH---HHHhcCCCEEEEE
Q 021854 174 ---------FISNAGSLKGVQHVILLSQLSVYRGSGGI---------QALMKGNARKLAEQDES---MLMASGIPYTIIR 232 (306)
Q Consensus 174 ---------~~~~~a~~~gvkr~V~iSS~~~~~~~~~~---------~~~~~~~a~~~~~~aE~---~l~~sgi~~tiiR 232 (306)
.+++++++.+ +|||++||.+++...... .+.....+...|..+|. +.++.++++++||
T Consensus 79 ~~~n~~~~~~l~~a~~~~~-~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~i~~~ivr 157 (224)
T 3h2s_A 79 GYLHLDFATHLVSLLRNSD-TLAVFILGSASLAMPGADHPMILDFPESAASQPWYDGALYQYYEYQFLQMNANVNWIGIS 157 (224)
T ss_dssp THHHHHHHHHHHHTCTTCC-CEEEEECCGGGSBCTTCSSCGGGGCCGGGGGSTTHHHHHHHHHHHHHHTTCTTSCEEEEE
T ss_pred hhHHHHHHHHHHHHHHHcC-CcEEEEecceeeccCCCCccccccCCCCCccchhhHHHHHHHHHHHHHHhcCCCcEEEEc
Confidence 1556788888 999999998665432210 00001112222333332 2346799999999
Q ss_pred cCcccCCCCCCcceee-----ecCCCCccccCHHHHHHHHHHHhhCCCCCCcEEEEecCCc
Q 021854 233 TGVLQNTPGGKQGFQF-----EEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVVNGEE 288 (306)
Q Consensus 233 Pg~l~~~~~~~~~~~~-----~~g~~~~~~Is~~DVA~~iv~aL~~~~~~g~~~~v~~g~~ 288 (306)
|+++....... .+.. ..+.....+++++|||++++.+++++...+++|++++.+.
T Consensus 158 p~~v~g~~~~~-~~~~~~~~~~~~~~~~~~i~~~DvA~~~~~~l~~~~~~g~~~~~~~~~~ 217 (224)
T 3h2s_A 158 PSEAFPSGPAT-SYVAGKDTLLVGEDGQSHITTGNMALAILDQLEHPTAIRDRIVVRDADL 217 (224)
T ss_dssp ECSBCCCCCCC-CEEEESSBCCCCTTSCCBCCHHHHHHHHHHHHHSCCCTTSEEEEEECC-
T ss_pred CccccCCCccc-CceecccccccCCCCCceEeHHHHHHHHHHHhcCccccCCEEEEecCcc
Confidence 99976432211 1221 1233446789999999999999999998899999998553
|
| >3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.92 E-value=4.7e-24 Score=184.98 Aligned_cols=183 Identities=11% Similarity=0.118 Sum_probs=128.1
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcCCc------
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG------ 173 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~g------ 173 (306)
|+|+||||||+||++++++|+++|++|++++|++++..... .+++++.+|++|.+. +++.++|+|||+++.
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-~~~~~~~~D~~d~~~--~~~~~~d~vi~~ag~~~~~~~ 77 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH-KDINILQKDIFDLTL--SDLSDQNVVVDAYGISPDEAE 77 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHC-SSSEEEECCGGGCCH--HHHTTCSEEEECCCSSTTTTT
T ss_pred CeEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhcc-CCCeEEeccccChhh--hhhcCCCEEEECCcCCccccc
Confidence 57999999999999999999999999999999998765544 689999999999877 889999999998432
Q ss_pred -------hhhhcccccCCCEEEEecCcccccCCCC------------cccccchHHHHHHHHHHHHHH--hcCCCEEEEE
Q 021854 174 -------FISNAGSLKGVQHVILLSQLSVYRGSGG------------IQALMKGNARKLAEQDESMLM--ASGIPYTIIR 232 (306)
Q Consensus 174 -------~~~~~a~~~gvkr~V~iSS~~~~~~~~~------------~~~~~~~~a~~~~~~aE~~l~--~sgi~~tiiR 232 (306)
.+++++++.+++|||++||..++.+... ...|... +...+ .+..++ ..+++|++||
T Consensus 78 ~~~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~~--k~~~e-~~~~~~~~~~gi~~~ivr 154 (221)
T 3ew7_A 78 KHVTSLDHLISVLNGTVSPRLLVVGGAASLQIDEDGNTLLESKGLREAPYYPTA--RAQAK-QLEHLKSHQAEFSWTYIS 154 (221)
T ss_dssp SHHHHHHHHHHHHCSCCSSEEEEECCCC-------------------CCCSCCH--HHHHH-HHHHHHTTTTTSCEEEEE
T ss_pred hHHHHHHHHHHHHHhcCCceEEEEecceEEEcCCCCccccccCCCCCHHHHHHH--HHHHH-HHHHHHhhccCccEEEEe
Confidence 1556778888999999999877543221 1123221 21121 223366 6899999999
Q ss_pred cCcccCCCCCCccee-----eecCCCCccccCHHHHHHHHHHHhhCCCCCCcEEEEecCCc
Q 021854 233 TGVLQNTPGGKQGFQ-----FEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVVNGEE 288 (306)
Q Consensus 233 Pg~l~~~~~~~~~~~-----~~~g~~~~~~Is~~DVA~~iv~aL~~~~~~g~~~~v~~g~~ 288 (306)
|+++.........+. +........+++++|||++++.+++++...+++|+++++..
T Consensus 155 p~~v~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~g~~~~~~~~~~ 215 (221)
T 3ew7_A 155 PSAMFEPGERTGDYQIGKDHLLFGSDGNSFISMEDYAIAVLDEIERPNHLNEHFTVAGKLE 215 (221)
T ss_dssp CSSCCCCC---------------------CCCHHHHHHHHHHHHHSCSCTTSEEECCC---
T ss_pred CcceecCCCccCceEeccccceecCCCCceEeHHHHHHHHHHHHhCccccCCEEEECCCCc
Confidence 999764321111011 11111224689999999999999999998899999998664
|
| >3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=6.6e-24 Score=197.41 Aligned_cols=203 Identities=12% Similarity=0.145 Sum_probs=155.0
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcc----hhh---hhcCCCceeeeccCCCHHHHHHHhc--CccEEEE
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR----NAM---ESFGTYVESMAGDASNKKFLKTALR--GVRSIIC 169 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~----~~~---~~~~~~v~~v~~D~~d~~~l~~~~~--~~d~vi~ 169 (306)
+++||||||||+||++++++|++.|++|++++|+.. +.. .....+++++.+|+.|.+++.++++ ++|+|||
T Consensus 10 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vi~ 89 (346)
T 3i6i_A 10 KGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINEQEAMEKILKEHEIDIVVS 89 (346)
T ss_dssp -CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHHHTTCCEEEE
T ss_pred CCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecCCHHHHHHHHhhCCCCEEEE
Confidence 479999999999999999999999999999999872 221 2224689999999999999999999 9999999
Q ss_pred cCCc-------hhhhcccccC-CCEEEEecCcccccC-CCCcccccchHHHHHHHHHHHHHHhcCCCEEEEEcCcccCCC
Q 021854 170 PSEG-------FISNAGSLKG-VQHVILLSQLSVYRG-SGGIQALMKGNARKLAEQDESMLMASGIPYTIIRTGVLQNTP 240 (306)
Q Consensus 170 ~~~g-------~~~~~a~~~g-vkr~V~iSS~~~~~~-~~~~~~~~~~~a~~~~~~aE~~l~~sgi~~tiiRPg~l~~~~ 240 (306)
+++. .+++++++.+ +++||+ |+.+.... ..+..+. ..+...|..+|.++++.+++|+++|||++.+..
T Consensus 90 ~a~~~n~~~~~~l~~aa~~~g~v~~~v~-S~~g~~~~e~~~~~p~--~~y~~sK~~~e~~l~~~g~~~tivrpg~~~g~~ 166 (346)
T 3i6i_A 90 TVGGESILDQIALVKAMKAVGTIKRFLP-SEFGHDVNRADPVEPG--LNMYREKRRVRQLVEESGIPFTYICCNSIASWP 166 (346)
T ss_dssp CCCGGGGGGHHHHHHHHHHHCCCSEEEC-SCCSSCTTTCCCCTTH--HHHHHHHHHHHHHHHHTTCCBEEEECCEESSCC
T ss_pred CCchhhHHHHHHHHHHHHHcCCceEEee-cccCCCCCccCcCCCc--chHHHHHHHHHHHHHHcCCCEEEEEeccccccc
Confidence 8553 2667788888 999987 65543211 1111111 123445778899999999999999999865432
Q ss_pred C------------CCcceeeecCCCCccccCHHHHHHHHHHHhhCCCCCCcEEEEec--CCcCHHHHHHHHHHHhhhc
Q 021854 241 G------------GKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVVN--GEEKVSDWKKCFSRLMEKT 304 (306)
Q Consensus 241 ~------------~~~~~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~~~g~~~~v~~--g~~s~~d~~~l~~~l~~~~ 304 (306)
. ......++.++....+++++|+|++++.++.++...+++|++.+ ...++.|+.++++++.+++
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~g~~~~~s~~e~~~~~~~~~g~~ 244 (346)
T 3i6i_A 167 YYNNIHPSEVLPPTDFFQIYGDGNVKAYFVAGTDIGKFTMKTVDDVRTLNKSVHFRPSCNCLNINELASVWEKKIGRT 244 (346)
T ss_dssp CSCC-----CCCCSSCEEEETTSCCCEEEECHHHHHHHHHHHTTCGGGTTEEEECCCGGGEECHHHHHHHHHHHHTSC
T ss_pred CccccccccccCCCceEEEccCCCceEEecCHHHHHHHHHHHHhCccccCeEEEEeCCCCCCCHHHHHHHHHHHHCCC
Confidence 1 11112234566668899999999999999998877788999984 3468999999999988764
|
| >1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=1.4e-23 Score=196.60 Aligned_cols=201 Identities=16% Similarity=0.173 Sum_probs=154.8
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchh--hhhcC-CCceeeecc-CCCHHHHHHHhcCccEEEEcCCch
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA--MESFG-TYVESMAGD-ASNKKFLKTALRGVRSIICPSEGF 174 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~--~~~~~-~~v~~v~~D-~~d~~~l~~~~~~~d~vi~~~~g~ 174 (306)
+|+|+||||||+||++++++|+++|++|++++|+.++. ..... .+++++.+| ++|.+++.++++++|+|||+++..
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~l~~~~~v~~v~~D~l~d~~~l~~~~~~~d~Vi~~a~~~ 84 (352)
T 1xgk_A 5 KKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPLMDTLFEGAHLAFINTTSQ 84 (352)
T ss_dssp CCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHHTSTTEEEEESCCTTCHHHHHHHHTTCSEEEECCCST
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhhHHHHhhcCCcEEEECCccCCHHHHHHHHhcCCEEEEcCCCC
Confidence 68899999999999999999999999999999998764 22222 368899999 999999999999999999874322
Q ss_pred ----------hhhcccccC-CCEEEEecCccc-ccCCCCcccccchHHHHHHHHHHHHHHhcCCCEEEEEcCcccCCCCC
Q 021854 175 ----------ISNAGSLKG-VQHVILLSQLSV-YRGSGGIQALMKGNARKLAEQDESMLMASGIPYTIIRTGVLQNTPGG 242 (306)
Q Consensus 175 ----------~~~~a~~~g-vkr~V~iSS~~~-~~~~~~~~~~~~~~a~~~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~ 242 (306)
+++++++.+ ++|||++||... ..+......|. ..|..+|.++++.++++++|||+++.+....
T Consensus 85 ~~~~~~~~~~l~~aa~~~g~v~~~V~~SS~~~~~~~~~~~~~y~-----~sK~~~E~~~~~~gi~~~ivrpg~~g~~~~~ 159 (352)
T 1xgk_A 85 AGDEIAIGKDLADAAKRAGTIQHYIYSSMPDHSLYGPWPAVPMW-----APKFTVENYVRQLGLPSTFVYAGIYNNNFTS 159 (352)
T ss_dssp TSCHHHHHHHHHHHHHHHSCCSEEEEEECCCGGGTSSCCCCTTT-----HHHHHHHHHHHTSSSCEEEEEECEEGGGCBS
T ss_pred CcHHHHHHHHHHHHHHHcCCccEEEEeCCccccccCCCCCccHH-----HHHHHHHHHHHHcCCCEEEEecceecCCchh
Confidence 456777888 999999999862 22222223343 3467789999999999999999986543211
Q ss_pred -----------Ccc-ee---eecCCCCccccCH-HHHHHHHHHHhhCCC--CCCcEEEEecCCcCHHHHHHHHHHHhhhc
Q 021854 243 -----------KQG-FQ---FEEGCAANGSLSK-EDAAFICVEALESIP--QTGLIFEVVNGEEKVSDWKKCFSRLMEKT 304 (306)
Q Consensus 243 -----------~~~-~~---~~~g~~~~~~Is~-~DVA~~iv~aL~~~~--~~g~~~~v~~g~~s~~d~~~l~~~l~~~~ 304 (306)
..+ .. ...++....++++ +|+|++++.++.++. ..+++|+++++..++.|+.+.+.++.+++
T Consensus 160 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~v~~Dva~ai~~~l~~~~~~~~g~~~~l~~~~~s~~e~~~~i~~~~G~~ 239 (352)
T 1xgk_A 160 LPYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQKWNGHRIALTFETLSPVQVCAAFSRALNRR 239 (352)
T ss_dssp SSCSSCBEEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHHHCHHHHTTCEEEECSEEECHHHHHHHHHHHHTSC
T ss_pred cccccccccccCCCceEEeeccCCCCceeeEecHHHHHHHHHHHHhCCchhhCCeEEEEecCCCCHHHHHHHHHHHHCCC
Confidence 111 11 1225556788998 999999999998753 36789999987779999999999887653
|
| >4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.91 E-value=2.1e-23 Score=193.44 Aligned_cols=208 Identities=13% Similarity=0.112 Sum_probs=151.7
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCC--CeEEEEecCcch--h---hhhc-CCCceeeeccCCCHHHHHHHhcC--cc
Q 021854 96 EEARDAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRN--A---MESF-GTYVESMAGDASNKKFLKTALRG--VR 165 (306)
Q Consensus 96 ~~~~~~ilVtGatG~iG~~l~~~L~~~g--~~V~~l~R~~~~--~---~~~~-~~~v~~v~~D~~d~~~l~~~~~~--~d 165 (306)
..++|+||||||||+||++++++|+++| ++|+++.|.... . .... ..+++++.+|+.|.+.+.+++++ +|
T Consensus 21 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 100 (346)
T 4egb_A 21 QSNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSIQDHPNYYFVKGEIQNGELLEHVIKERDVQ 100 (346)
T ss_dssp ---CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHTCC
T ss_pred ccCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccchhhhhhhccCCCeEEEEcCCCCHHHHHHHHhhcCCC
Confidence 3456899999999999999999999999 677777776522 1 1111 14789999999999999999987 99
Q ss_pred EEEEcCCc----------------------hhhhcccccCCCEEEEecCcccccCCCCcccc------c-chHHHHHHHH
Q 021854 166 SIICPSEG----------------------FISNAGSLKGVQHVILLSQLSVYRGSGGIQAL------M-KGNARKLAEQ 216 (306)
Q Consensus 166 ~vi~~~~g----------------------~~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~------~-~~~a~~~~~~ 216 (306)
+|||+++. .+.+++.+.++++||++||.++|........+ . ...+...|..
T Consensus 101 ~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vy~~~~~~~~~~E~~~~~p~~~Y~~sK~~ 180 (346)
T 4egb_A 101 VIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYPHIKLVQVSTDEVYGSLGKTGRFTEETPLAPNSPYSSSKAS 180 (346)
T ss_dssp EEEECCCCC---------CHHHHHHTHHHHHHHHHHHHSTTSEEEEEEEGGGGCCCCSSCCBCTTSCCCCCSHHHHHHHH
T ss_pred EEEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCchHHhCCCCcCCCcCCCCCCCCCChhHHHHHH
Confidence 99998431 14566778899999999999887643211000 0 0123334556
Q ss_pred HHHHHHh----cCCCEEEEEcCcccCCCC--------------CCccee-eecCCCCccccCHHHHHHHHHHHhhCCCCC
Q 021854 217 DESMLMA----SGIPYTIIRTGVLQNTPG--------------GKQGFQ-FEEGCAANGSLSKEDAAFICVEALESIPQT 277 (306)
Q Consensus 217 aE~~l~~----sgi~~tiiRPg~l~~~~~--------------~~~~~~-~~~g~~~~~~Is~~DVA~~iv~aL~~~~~~ 277 (306)
+|.+++. .+++++++||+.+..... .+..+. ++.+.....+|+++|+|++++.+++.+. .
T Consensus 181 ~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~-~ 259 (346)
T 4egb_A 181 ADMIALAYYKTYQLPVIVTRCSNNYGPYQYPEKLIPLMVTNALEGKKLPLYGDGLNVRDWLHVTDHCSAIDVVLHKGR-V 259 (346)
T ss_dssp HHHHHHHHHHHHCCCEEEEEECEEESTTCCTTSHHHHHHHHHHTTCCCEEETTSCCEECEEEHHHHHHHHHHHHHHCC-T
T ss_pred HHHHHHHHHHHhCCCEEEEeecceeCcCCCccchHHHHHHHHHcCCCceeeCCCCeEEeeEEHHHHHHHHHHHHhcCC-C
Confidence 6666654 699999999998653221 112222 2455566789999999999999998776 6
Q ss_pred CcEEEEecCC-cCHHHHHHHHHHHhhhc
Q 021854 278 GLIFEVVNGE-EKVSDWKKCFSRLMEKT 304 (306)
Q Consensus 278 g~~~~v~~g~-~s~~d~~~l~~~l~~~~ 304 (306)
+++|+++++. .++.|+.+++.++.+.+
T Consensus 260 g~~~~i~~~~~~s~~e~~~~i~~~~g~~ 287 (346)
T 4egb_A 260 GEVYNIGGNNEKTNVEVVEQIITLLGKT 287 (346)
T ss_dssp TCEEEECCSCCEEHHHHHHHHHHHHTCC
T ss_pred CCEEEECCCCceeHHHHHHHHHHHhCCC
Confidence 7899999976 68999999999887653
|
| >3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=6.9e-24 Score=193.71 Aligned_cols=203 Identities=15% Similarity=0.136 Sum_probs=150.7
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcCCc------
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG------ 173 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~g------ 173 (306)
|+||||||+|+||++++++|+++|++|++++|+.+........+++++.+|+.|.+ +.+++++ |+|||+++.
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~d~~-~~~~~~~-d~vih~A~~~~~~~~ 78 (312)
T 3ko8_A 1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREFVNPSAELHVRDLKDYS-WGAGIKG-DVVFHFAANPEVRLS 78 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGGSCTTSEEECCCTTSTT-TTTTCCC-SEEEECCSSCSSSGG
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhhcCCCceEEECccccHH-HHhhcCC-CEEEECCCCCCchhh
Confidence 68999999999999999999999999999999887755555678999999999988 8888888 999998441
Q ss_pred ----------------hhhhcccccCCCEEEEecCcccccCCCCc-----cccc-chHHHHHHHHHHHHHH----hcCCC
Q 021854 174 ----------------FISNAGSLKGVQHVILLSQLSVYRGSGGI-----QALM-KGNARKLAEQDESMLM----ASGIP 227 (306)
Q Consensus 174 ----------------~~~~~a~~~gvkr~V~iSS~~~~~~~~~~-----~~~~-~~~a~~~~~~aE~~l~----~sgi~ 227 (306)
.+.+++.+.++++||++||.++|...... .... ...+...|..+|.+++ +.+++
T Consensus 79 ~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~vyg~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~g~~ 158 (312)
T 3ko8_A 79 TTEPIVHFNENVVATFNVLEWARQTGVRTVVFASSSTVYGDADVIPTPEEEPYKPISVYGAAKAAGEVMCATYARLFGVR 158 (312)
T ss_dssp GSCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCE
T ss_pred hhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeCcHHHhCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHhCCC
Confidence 14456777899999999999988543210 0000 1123334555565554 35999
Q ss_pred EEEEEcCcccCCCCC-------------C-cce-eeecCCCCccccCHHHHHHHHHHHhhC---CCCCCcEEEEecCC-c
Q 021854 228 YTIIRTGVLQNTPGG-------------K-QGF-QFEEGCAANGSLSKEDAAFICVEALES---IPQTGLIFEVVNGE-E 288 (306)
Q Consensus 228 ~tiiRPg~l~~~~~~-------------~-~~~-~~~~g~~~~~~Is~~DVA~~iv~aL~~---~~~~g~~~~v~~g~-~ 288 (306)
++++||+++...... + ..+ .++.+.....+++++|+|++++.++++ +...+++|+++++. .
T Consensus 159 ~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~ni~~~~~~ 238 (312)
T 3ko8_A 159 CLAVRYANVVGPRLRHGVIYDFIMKLRRNPNVLEVLGDGTQRKSYLYVRDAVEATLAAWKKFEEMDAPFLALNVGNVDAV 238 (312)
T ss_dssp EEEEEECEEECTTCCSSHHHHHHHHHHHCTTEEEEC----CEECEEEHHHHHHHHHHHHHHHHHSCCSEEEEEESCSSCE
T ss_pred EEEEeeccccCcCCCCChHHHHHHHHHhCCCCeEEcCCCCeEEeeEEHHHHHHHHHHHHHhccccCCCCcEEEEcCCCce
Confidence 999999996533211 1 111 234455667899999999999999987 45667899999865 5
Q ss_pred CHHHHHHHHHHHhhhc
Q 021854 289 KVSDWKKCFSRLMEKT 304 (306)
Q Consensus 289 s~~d~~~l~~~l~~~~ 304 (306)
++.|+.+++.++.+..
T Consensus 239 s~~e~~~~i~~~~g~~ 254 (312)
T 3ko8_A 239 RVLDIAQIVAEVLGLR 254 (312)
T ss_dssp EHHHHHHHHHHHHTCC
T ss_pred eHHHHHHHHHHHhCCC
Confidence 8999999998887643
|
| >2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=5.2e-23 Score=193.92 Aligned_cols=204 Identities=13% Similarity=0.046 Sum_probs=151.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcCCc----
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG---- 173 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~g---- 173 (306)
++|+||||||+|+||++++++|+++|++|++++|+.++.......+++++.+|+.|.+++.++++++|+|||+++.
T Consensus 28 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~Vih~A~~~~~~ 107 (379)
T 2c5a_A 28 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMFCDEFHLVDLRVMENCLKVTEGVDHVFNLAADMGGM 107 (379)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGGGTCSEEEECCTTSHHHHHHHHTTCSEEEECCCCCCCH
T ss_pred cCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhhccCCceEEECCCCCHHHHHHHhCCCCEEEECceecCcc
Confidence 4689999999999999999999999999999999886643333357899999999999999999999999998431
Q ss_pred -------------------hhhhcccccCCCEEEEecCcccccCCCC-------cc-----ccc-chHHHHHHHHHHHHH
Q 021854 174 -------------------FISNAGSLKGVQHVILLSQLSVYRGSGG-------IQ-----ALM-KGNARKLAEQDESML 221 (306)
Q Consensus 174 -------------------~~~~~a~~~gvkr~V~iSS~~~~~~~~~-------~~-----~~~-~~~a~~~~~~aE~~l 221 (306)
.+.+++.+.++++||++||.+++..... .. ... ...+...|..+|.++
T Consensus 108 ~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~~V~~SS~~v~~~~~~~~~~~~~~~E~~~~~~~~~~~Y~~sK~~~E~~~ 187 (379)
T 2c5a_A 108 GFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAFGLEKLATEELC 187 (379)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSSBCCSSHHHHHHHHHHHHH
T ss_pred cccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeehheeCCCCCCCccCCCcCcccCCCCCCCChhHHHHHHHHHHH
Confidence 0345566789999999999888753211 00 000 112333455566655
Q ss_pred H----hcCCCEEEEEcCcccCCCCC------------------Ccc-ee-eecCCCCccccCHHHHHHHHHHHhhCCCCC
Q 021854 222 M----ASGIPYTIIRTGVLQNTPGG------------------KQG-FQ-FEEGCAANGSLSKEDAAFICVEALESIPQT 277 (306)
Q Consensus 222 ~----~sgi~~tiiRPg~l~~~~~~------------------~~~-~~-~~~g~~~~~~Is~~DVA~~iv~aL~~~~~~ 277 (306)
+ +.++++++|||+++...... +.. +. ++.++....+++++|+|++++.+++.+ .
T Consensus 188 ~~~~~~~gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~ai~~~l~~~--~ 265 (379)
T 2c5a_A 188 KHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLTKSD--F 265 (379)
T ss_dssp HHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEECCEEHHHHHHHHHHHHHSS--C
T ss_pred HHHHHHHCCCEEEEEeCceeCcCCCcccccccHHHHHHHHHHhCCCceEEeCCCCeeEEEEEHHHHHHHHHHHhhcc--C
Confidence 4 46999999999996532211 111 22 234455678999999999999999876 4
Q ss_pred CcEEEEecCC-cCHHHHHHHHHHHhhh
Q 021854 278 GLIFEVVNGE-EKVSDWKKCFSRLMEK 303 (306)
Q Consensus 278 g~~~~v~~g~-~s~~d~~~l~~~l~~~ 303 (306)
+++|++++++ .++.|+.+++.++.+.
T Consensus 266 ~~~~ni~~~~~~s~~e~~~~i~~~~g~ 292 (379)
T 2c5a_A 266 REPVNIGSDEMVSMNEMAEMVLSFEEK 292 (379)
T ss_dssp CSCEEECCCCCEEHHHHHHHHHHTTTC
T ss_pred CCeEEeCCCCccCHHHHHHHHHHHhCC
Confidence 6799999865 5899999999887764
|
| >2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} | Back alignment and structure |
|---|
Probab=99.91 E-value=1.6e-23 Score=190.86 Aligned_cols=203 Identities=15% Similarity=0.187 Sum_probs=150.5
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCc-------chhh---hhcCCCceeeeccCCCHHHHHHHhcCccEEE
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK-------RNAM---ESFGTYVESMAGDASNKKFLKTALRGVRSII 168 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~-------~~~~---~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi 168 (306)
+++|+||||||+||++++++|+++|++|++++|+. ++.. .....+++++.+|+.|.+++.++++++|+||
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~d~vi 81 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDINDHETLVKAIKQVDIVI 81 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEE
T ss_pred CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCCCCHHHHHHHHhCCCEEE
Confidence 57899999999999999999999999999999987 3322 1123578999999999999999999999999
Q ss_pred EcCCc-------hhhhcccccC-CCEEEEecCcccccCC-CCcccccchHHHHHHHHHHHHHHhcCCCEEEEEcCcccCC
Q 021854 169 CPSEG-------FISNAGSLKG-VQHVILLSQLSVYRGS-GGIQALMKGNARKLAEQDESMLMASGIPYTIIRTGVLQNT 239 (306)
Q Consensus 169 ~~~~g-------~~~~~a~~~g-vkr~V~iSS~~~~~~~-~~~~~~~~~~a~~~~~~aE~~l~~sgi~~tiiRPg~l~~~ 239 (306)
|+++. .+++++++.| ++|||+ |+.+..... ....+. ...+ ..|..+|.++++.++++++||||++.+.
T Consensus 82 ~~a~~~~~~~~~~l~~aa~~~g~v~~~v~-S~~g~~~~~~~~~~p~-~~~y-~sK~~~e~~~~~~~i~~~~lrp~~~~~~ 158 (307)
T 2gas_A 82 CAAGRLLIEDQVKIIKAIKEAGNVKKFFP-SEFGLDVDRHDAVEPV-RQVF-EEKASIRRVIEAEGVPYTYLCCHAFTGY 158 (307)
T ss_dssp ECSSSSCGGGHHHHHHHHHHHCCCSEEEC-SCCSSCTTSCCCCTTH-HHHH-HHHHHHHHHHHHHTCCBEEEECCEETTT
T ss_pred ECCcccccccHHHHHHHHHhcCCceEEee-cccccCcccccCCCcc-hhHH-HHHHHHHHHHHHcCCCeEEEEcceeecc
Confidence 98442 1567788888 999984 554432111 111110 1122 5577889999999999999999986532
Q ss_pred CC-----------CCccee-eecCCCCccccCHHHHHHHHHHHhhCCCCCCcEEEEecC--CcCHHHHHHHHHHHhhhc
Q 021854 240 PG-----------GKQGFQ-FEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVVNG--EEKVSDWKKCFSRLMEKT 304 (306)
Q Consensus 240 ~~-----------~~~~~~-~~~g~~~~~~Is~~DVA~~iv~aL~~~~~~g~~~~v~~g--~~s~~d~~~l~~~l~~~~ 304 (306)
.. ....+. ++.++....+++++|+|++++.++.++...+++|++.++ ..++.|+.++++++.++.
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~ 237 (307)
T 2gas_A 159 FLRNLAQLDATDPPRDKVVILGDGNVKGAYVTEADVGTFTIRAANDPNTLNKAVHIRLPKNYLTQNEVIALWEKKIGKT 237 (307)
T ss_dssp TGGGTTCTTCSSCCSSEEEEETTSCSEEEEECHHHHHHHHHHHHTCGGGTTEEEECCCGGGEEEHHHHHHHHHHHHTSC
T ss_pred ccccccccccccCCCCeEEEecCCCcceEEeeHHHHHHHHHHHHcCccccCceEEEeCCCCcCCHHHHHHHHHHHhCCC
Confidence 10 111122 234455578899999999999999887666888888753 368999999999987754
|
| >2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=2.8e-23 Score=190.67 Aligned_cols=204 Identities=12% Similarity=0.135 Sum_probs=152.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcc-hhh---hhcCCCceeeeccCCCHHHHHHHhcCccEEEEcCCc
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR-NAM---ESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG 173 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~-~~~---~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~g 173 (306)
|+++|+||||||+||++++++|+++|++|++++|+.+ +.. +....+++++.+|+.|.+++.++++++|+|||+++.
T Consensus 10 m~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~~~v~~v~~Dl~d~~~l~~a~~~~d~vi~~a~~ 89 (318)
T 2r6j_A 10 MKSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSLGAIIVKGELDEHEKLVELMKKVDVVISALAF 89 (318)
T ss_dssp CCCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEECCCG
T ss_pred CCCeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhcCCCEEEEecCCCHHHHHHHHcCCCEEEECCch
Confidence 4568999999999999999999999999999999885 321 112357899999999999999999999999998542
Q ss_pred -------hhhhcccccC-CCEEEEecCcccccCC-CCcccccchHHHHHHHHHHHHHHhcCCCEEEEEcCcccCC-----
Q 021854 174 -------FISNAGSLKG-VQHVILLSQLSVYRGS-GGIQALMKGNARKLAEQDESMLMASGIPYTIIRTGVLQNT----- 239 (306)
Q Consensus 174 -------~~~~~a~~~g-vkr~V~iSS~~~~~~~-~~~~~~~~~~a~~~~~~aE~~l~~sgi~~tiiRPg~l~~~----- 239 (306)
.+++++++.+ ++|||+ |+.+..... ....+. ...+..|..+|.++++.++++++|||+++.+.
T Consensus 90 ~~~~~~~~l~~aa~~~g~v~~~v~-S~~g~~~~~~~~~~p~--~~~y~sK~~~e~~~~~~~~~~~~lr~~~~~~~~~~~~ 166 (318)
T 2r6j_A 90 PQILDQFKILEAIKVAGNIKRFLP-SDFGVEEDRINALPPF--EALIERKRMIRRAIEEANIPYTYVSANCFASYFINYL 166 (318)
T ss_dssp GGSTTHHHHHHHHHHHCCCCEEEC-SCCSSCTTTCCCCHHH--HHHHHHHHHHHHHHHHTTCCBEEEECCEEHHHHHHHH
T ss_pred hhhHHHHHHHHHHHhcCCCCEEEe-eccccCcccccCCCCc--chhHHHHHHHHHHHHhcCCCeEEEEcceehhhhhhhh
Confidence 1567788888 999985 554422111 111110 11225577889999999999999999985421
Q ss_pred --C-CCCcce-eeecCCCCccccCHHHHHHHHHHHhhCCCCCCcEEEEecC--CcCHHHHHHHHHHHhhhc
Q 021854 240 --P-GGKQGF-QFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVVNG--EEKVSDWKKCFSRLMEKT 304 (306)
Q Consensus 240 --~-~~~~~~-~~~~g~~~~~~Is~~DVA~~iv~aL~~~~~~g~~~~v~~g--~~s~~d~~~l~~~l~~~~ 304 (306)
. .....+ .++.++....+++++|+|++++.++.++...+++|++.++ ..++.|+.++++++.+++
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~~~g~~~~~s~~e~~~~~~~~~g~~ 237 (318)
T 2r6j_A 167 LRPYDPKDEITVYGTGEAKFAMNYEQDIGLYTIKVATDPRALNRVVIYRPSTNIITQLELISRWEKKIGKK 237 (318)
T ss_dssp HCTTCCCSEEEEETTSCCEEEEECHHHHHHHHHHHTTCGGGTTEEEECCCGGGEEEHHHHHHHHHHHHTCC
T ss_pred ccccCCCCceEEecCCCceeeEeeHHHHHHHHHHHhcCccccCeEEEecCCCCccCHHHHHHHHHHHhCCC
Confidence 1 111222 2344556678999999999999999887666788888743 368999999999988754
|
| >1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.91 E-value=1.4e-23 Score=191.69 Aligned_cols=203 Identities=13% Similarity=0.153 Sum_probs=150.8
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcc-----hhh---hhcCCCceeeeccCCCHHHHHHHhcCccEEEEc
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR-----NAM---ESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~-----~~~---~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~ 170 (306)
+++|+||||||+||++++++|+++|++|++++|+.+ +.. .....+++++.+|+.|.+++.++++++|+|||+
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~ 83 (313)
T 1qyd_A 4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQVDVVISA 83 (313)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTCSEEEEC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHHhCCeEEEeCCCCCHHHHHHHHhCCCEEEEC
Confidence 578999999999999999999999999999999853 221 122457999999999999999999999999998
Q ss_pred CCc-----------hhhhcccccC-CCEEEEecCcccccCC--CCcccccchHHHHHHHHHHHHHHhcCCCEEEEEcCcc
Q 021854 171 SEG-----------FISNAGSLKG-VQHVILLSQLSVYRGS--GGIQALMKGNARKLAEQDESMLMASGIPYTIIRTGVL 236 (306)
Q Consensus 171 ~~g-----------~~~~~a~~~g-vkr~V~iSS~~~~~~~--~~~~~~~~~~a~~~~~~aE~~l~~sgi~~tiiRPg~l 236 (306)
++. .+++++++.| ++|||+ |+.+..... ....+. ...+..|..+|.++++.+++++++||+++
T Consensus 84 a~~~~~~~~~~~~~~l~~aa~~~g~v~~~v~-S~~g~~~~~~~~~~~p~--~~~y~sK~~~e~~~~~~g~~~~ilrp~~~ 160 (313)
T 1qyd_A 84 LAGGVLSHHILEQLKLVEAIKEAGNIKRFLP-SEFGMDPDIMEHALQPG--SITFIDKRKVRRAIEAASIPYTYVSSNMF 160 (313)
T ss_dssp CCCSSSSTTTTTHHHHHHHHHHSCCCSEEEC-SCCSSCTTSCCCCCSST--THHHHHHHHHHHHHHHTTCCBCEEECCEE
T ss_pred CccccchhhHHHHHHHHHHHHhcCCCceEEe-cCCcCCccccccCCCCC--cchHHHHHHHHHHHHhcCCCeEEEEecee
Confidence 431 1567788888 999986 654432111 110110 11225677889999999999999999985
Q ss_pred cCC----C-C-------CCcce-eeecCCCCccccCHHHHHHHHHHHhhCCCCCCcEEEEecC--CcCHHHHHHHHHHHh
Q 021854 237 QNT----P-G-------GKQGF-QFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVVNG--EEKVSDWKKCFSRLM 301 (306)
Q Consensus 237 ~~~----~-~-------~~~~~-~~~~g~~~~~~Is~~DVA~~iv~aL~~~~~~g~~~~v~~g--~~s~~d~~~l~~~l~ 301 (306)
.+. . . ....+ .++.++....+++++|+|++++.++.++...+++|++.++ ..++.|+.++++++.
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~~~g~~~~~s~~e~~~~~~~~~ 240 (313)
T 1qyd_A 161 AGYFAGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQTLNKTMYIRPPMNILSQKEVIQIWERLS 240 (313)
T ss_dssp HHHHTTTSSCTTCCSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHHTTCGGGSSSEEECCCGGGEEEHHHHHHHHHHHH
T ss_pred ccccccccccccccccCCCCeEEEeCCCCceEEEEEHHHHHHHHHHHHhCcccCCceEEEeCCCCccCHHHHHHHHHHhc
Confidence 421 1 0 11111 2234555678899999999999999887666788888753 368999999999988
Q ss_pred hhc
Q 021854 302 EKT 304 (306)
Q Consensus 302 ~~~ 304 (306)
+++
T Consensus 241 g~~ 243 (313)
T 1qyd_A 241 EQN 243 (313)
T ss_dssp TCC
T ss_pred CCC
Confidence 764
|
| >1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=8.2e-23 Score=190.16 Aligned_cols=205 Identities=13% Similarity=0.031 Sum_probs=149.7
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcch----hhhh---c----CCCceeeeccCCCHHHHHHHhcCcc
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN----AMES---F----GTYVESMAGDASNKKFLKTALRGVR 165 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~----~~~~---~----~~~v~~v~~D~~d~~~l~~~~~~~d 165 (306)
.++|+||||||+|+||++++++|+++|++|++++|+... .... + ..+++++.+|+.|.+++.++++++|
T Consensus 25 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d 104 (352)
T 1sb8_A 25 AQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGVD 104 (352)
T ss_dssp HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTTCS
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhcCCC
Confidence 346899999999999999999999999999999997642 1111 1 2578999999999999999999999
Q ss_pred EEEEcCCch----------------------hhhcccccCCCEEEEecCcccccCCCCcc------cccchHHHHHHHHH
Q 021854 166 SIICPSEGF----------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQ------ALMKGNARKLAEQD 217 (306)
Q Consensus 166 ~vi~~~~g~----------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~~------~~~~~~a~~~~~~a 217 (306)
+|||+++.. +.+++.+.++++||++||.+++....... ......+...|..+
T Consensus 105 ~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~ 184 (352)
T 1sb8_A 105 YVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTYGDHPGLPKVEDTIGKPLSPYAVTKYVN 184 (352)
T ss_dssp EEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSHHHHHHHHH
T ss_pred EEEECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhcCCCCCCCCCCCCCCCCCChhHHHHHHH
Confidence 999984310 34556678999999999999876432100 00011223345556
Q ss_pred HHHHH----hcCCCEEEEEcCcccCCCCC------------------Ccce-eeecCCCCccccCHHHHHHHHHHHhhCC
Q 021854 218 ESMLM----ASGIPYTIIRTGVLQNTPGG------------------KQGF-QFEEGCAANGSLSKEDAAFICVEALESI 274 (306)
Q Consensus 218 E~~l~----~sgi~~tiiRPg~l~~~~~~------------------~~~~-~~~~g~~~~~~Is~~DVA~~iv~aL~~~ 274 (306)
|.+++ +.++++++|||+++...... +..+ .++.++....+++++|+|++++.++..+
T Consensus 185 e~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~ 264 (352)
T 1sb8_A 185 ELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQANLLAATAG 264 (352)
T ss_dssp HHHHHHHHHHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHcCCCEEEEEECceeCcCCCCCcchhhHHHHHHHHHHCCCCcEEeCCCCceEeeEEHHHHHHHHHHHHhcc
Confidence 66654 35999999999986532211 1111 1234445568999999999999998863
Q ss_pred -CCCCcEEEEecCC-cCHHHHHHHHHHHh
Q 021854 275 -PQTGLIFEVVNGE-EKVSDWKKCFSRLM 301 (306)
Q Consensus 275 -~~~g~~~~v~~g~-~s~~d~~~l~~~l~ 301 (306)
...+++|+++++. .++.|+.+++.++.
T Consensus 265 ~~~~~~~~ni~~~~~~s~~e~~~~i~~~~ 293 (352)
T 1sb8_A 265 LDARNQVYNIAVGGRTSLNQLFFALRDGL 293 (352)
T ss_dssp GGGCSEEEEESCSCCEEHHHHHHHHHHHH
T ss_pred ccCCCceEEeCCCCCccHHHHHHHHHHHH
Confidence 4567899999865 58999999998887
|
| >1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.91 E-value=1.9e-23 Score=190.52 Aligned_cols=203 Identities=15% Similarity=0.168 Sum_probs=151.0
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchh---------hhhcCCCceeeeccCCCHHHHHHHhcCccEEEE
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA---------MESFGTYVESMAGDASNKKFLKTALRGVRSIIC 169 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~---------~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~ 169 (306)
+++|+||||||+||++++++|+++|++|++++|+.+.. ......+++++.+|+.|.+++.++++++|+|||
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~ 83 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKNVDVVIS 83 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHTCSEEEE
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHHhCCCEEEEeccCCHHHHHHHHcCCCEEEE
Confidence 57899999999999999999999999999999985321 112245799999999999999999999999999
Q ss_pred cCCc-------hhhhcccccC-CCEEEEecCcccccCC-CCcccccchHHHHHHHHHHHHHHhcCCCEEEEEcCcccCC-
Q 021854 170 PSEG-------FISNAGSLKG-VQHVILLSQLSVYRGS-GGIQALMKGNARKLAEQDESMLMASGIPYTIIRTGVLQNT- 239 (306)
Q Consensus 170 ~~~g-------~~~~~a~~~g-vkr~V~iSS~~~~~~~-~~~~~~~~~~a~~~~~~aE~~l~~sgi~~tiiRPg~l~~~- 239 (306)
+++. .+++++++++ ++|||+ |+.+..... ....+. ...+..|..+|.++++.+++++++||+++.+.
T Consensus 84 ~a~~~~~~~~~~l~~aa~~~g~v~~~v~-S~~g~~~~~~~~~~p~--~~~y~sK~~~e~~~~~~~~~~~~~r~~~~~~~~ 160 (308)
T 1qyc_A 84 TVGSLQIESQVNIIKAIKEVGTVKRFFP-SEFGNDVDNVHAVEPA--KSVFEVKAKVRRAIEAEGIPYTYVSSNCFAGYF 160 (308)
T ss_dssp CCCGGGSGGGHHHHHHHHHHCCCSEEEC-SCCSSCTTSCCCCTTH--HHHHHHHHHHHHHHHHHTCCBEEEECCEEHHHH
T ss_pred CCcchhhhhHHHHHHHHHhcCCCceEee-cccccCccccccCCcc--hhHHHHHHHHHHHHHhcCCCeEEEEeceecccc
Confidence 8542 1567788888 999984 655432211 111110 11225577889999999999999999975321
Q ss_pred ---C-C------CCcce-eeecCCCCccccCHHHHHHHHHHHhhCCCCCCcEEEEecC--CcCHHHHHHHHHHHhhhc
Q 021854 240 ---P-G------GKQGF-QFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVVNG--EEKVSDWKKCFSRLMEKT 304 (306)
Q Consensus 240 ---~-~------~~~~~-~~~~g~~~~~~Is~~DVA~~iv~aL~~~~~~g~~~~v~~g--~~s~~d~~~l~~~l~~~~ 304 (306)
. . ....+ .++.++....+++++|+|++++.++.++...+++|++.++ ..++.|+.++++++.+++
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~~~g~~~~~s~~e~~~~~~~~~g~~ 238 (308)
T 1qyc_A 161 LRSLAQAGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDPRTLNKTLYLRLPANTLSLNELVALWEKKIDKT 238 (308)
T ss_dssp TTTTTCTTCSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTSSCGGGTTEEEECCCGGGEEEHHHHHHHHHHHTTSC
T ss_pred ccccccccccCCCCCceEEecCCCceEEEecHHHHHHHHHHHHhCccccCeEEEEeCCCCccCHHHHHHHHHHHhCCC
Confidence 1 0 11112 2234555678999999999999999887666888888753 368999999999988764
|
| >3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} | Back alignment and structure |
|---|
Probab=99.90 E-value=2.3e-23 Score=191.29 Aligned_cols=204 Identities=11% Similarity=0.077 Sum_probs=151.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCc-c-----hhh---hhcCCCceeeeccCCCHHHHHHHhcCccEEE
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK-R-----NAM---ESFGTYVESMAGDASNKKFLKTALRGVRSII 168 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~-~-----~~~---~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi 168 (306)
++++|+||||||+||++++++|+++|++|++++|+. + +.. .....+++++.+|+.|.+++.++++++|+||
T Consensus 3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D~~d~~~l~~a~~~~d~vi 82 (321)
T 3c1o_A 3 HMEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEMEEHEKMVSVLKQVDIVI 82 (321)
T ss_dssp -CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEE
T ss_pred cccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhcCCcEEEEecCCCHHHHHHHHcCCCEEE
Confidence 357899999999999999999999999999999987 2 211 1123578999999999999999999999999
Q ss_pred EcCCc-------hhhhcccccC-CCEEEEecCcccccCC-CCcccccchHHHHHHHHHHHHHHhcCCCEEEEEcCcccCC
Q 021854 169 CPSEG-------FISNAGSLKG-VQHVILLSQLSVYRGS-GGIQALMKGNARKLAEQDESMLMASGIPYTIIRTGVLQNT 239 (306)
Q Consensus 169 ~~~~g-------~~~~~a~~~g-vkr~V~iSS~~~~~~~-~~~~~~~~~~a~~~~~~aE~~l~~sgi~~tiiRPg~l~~~ 239 (306)
|+++. .+++++.+.+ ++|||+ |+.+..... ....+. ...+ ..|..+|.++++.++++++|||+++.+.
T Consensus 83 ~~a~~~~~~~~~~l~~aa~~~g~v~~~v~-S~~g~~~~~~~~~~p~-~~~y-~sK~~~e~~~~~~~~~~~~lrp~~~~~~ 159 (321)
T 3c1o_A 83 SALPFPMISSQIHIINAIKAAGNIKRFLP-SDFGCEEDRIKPLPPF-ESVL-EKKRIIRRAIEAAALPYTYVSANCFGAY 159 (321)
T ss_dssp ECCCGGGSGGGHHHHHHHHHHCCCCEEEC-SCCSSCGGGCCCCHHH-HHHH-HHHHHHHHHHHHHTCCBEEEECCEEHHH
T ss_pred ECCCccchhhHHHHHHHHHHhCCccEEec-cccccCccccccCCCc-chHH-HHHHHHHHHHHHcCCCeEEEEeceeccc
Confidence 98542 1567788888 999983 544321110 111110 1123 5677889999999999999999985421
Q ss_pred ------------CCCCcceeeecCCCCccccCHHHHHHHHHHHhhCCCCCCcEEEEecC--CcCHHHHHHHHHHHhhhc
Q 021854 240 ------------PGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVVNG--EEKVSDWKKCFSRLMEKT 304 (306)
Q Consensus 240 ------------~~~~~~~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~~~g~~~~v~~g--~~s~~d~~~l~~~l~~~~ 304 (306)
...+....++.++....+++++|+|++++.++.++...+++|++.++ ..++.|+.++++++.++.
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~g~~~~~~g~~~~~t~~e~~~~~~~~~g~~ 238 (321)
T 3c1o_A 160 FVNYLLHPSPHPNRNDDIVIYGTGETKFVLNYEEDIAKYTIKVACDPRCCNRIVIYRPPKNIISQNELISLWEAKSGLS 238 (321)
T ss_dssp HHHHHHCCCSSCCTTSCEEEETTSCCEEEEECHHHHHHHHHHHHHCGGGTTEEEECCCGGGEEEHHHHHHHHHHHHTSC
T ss_pred cccccccccccccccCceEEecCCCcceeEeeHHHHHHHHHHHHhCccccCeEEEEeCCCCcccHHHHHHHHHHHcCCc
Confidence 11112122345566678999999999999999987767888888753 468999999999988764
|
| >3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} | Back alignment and structure |
|---|
Probab=99.90 E-value=1.8e-23 Score=189.20 Aligned_cols=199 Identities=15% Similarity=0.132 Sum_probs=152.9
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcC-ccEEEEcCCc----
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRG-VRSIICPSEG---- 173 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~-~d~vi~~~~g---- 173 (306)
+|+||||| +|+||++++++|+++|++|++++|+.++ .+.+++++.+|+.|.+.+.+++++ +|+|||+++.
T Consensus 3 ~~~ilVtG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~----~~~~~~~~~~Dl~d~~~~~~~~~~~~d~vih~a~~~~~~ 77 (286)
T 3gpi_A 3 LSKILIAG-CGDLGLELARRLTAQGHEVTGLRRSAQP----MPAGVQTLIADVTRPDTLASIVHLRPEILVYCVAASEYS 77 (286)
T ss_dssp CCCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECTTSC----CCTTCCEEECCTTCGGGCTTGGGGCCSEEEECHHHHHHC
T ss_pred CCcEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCccc----cccCCceEEccCCChHHHHHhhcCCCCEEEEeCCCCCCC
Confidence 57999999 5999999999999999999999999866 346799999999999999999998 9999998321
Q ss_pred -------------hhhhcccccCCCEEEEecCcccccCCCCcc-----cc-cchHHHHHHHHHHHHHHhcCCCEEEEEcC
Q 021854 174 -------------FISNAGSLKGVQHVILLSQLSVYRGSGGIQ-----AL-MKGNARKLAEQDESMLMASGIPYTIIRTG 234 (306)
Q Consensus 174 -------------~~~~~a~~~gvkr~V~iSS~~~~~~~~~~~-----~~-~~~~a~~~~~~aE~~l~~sgi~~tiiRPg 234 (306)
.+.+++.+.++++|||+||.++|....... .. ....+...|..+|.+ ++. ++++++||+
T Consensus 78 ~~~~~~~n~~~~~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~-~~~-~~~~ilR~~ 155 (286)
T 3gpi_A 78 DEHYRLSYVEGLRNTLSALEGAPLQHVFFVSSTGVYGQEVEEWLDEDTPPIAKDFSGKRMLEAEAL-LAA-YSSTILRFS 155 (286)
T ss_dssp -----CCSHHHHHHHHHHTTTSCCCEEEEEEEGGGCCCCCSSEECTTSCCCCCSHHHHHHHHHHHH-GGG-SSEEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCCCEEEEEcccEEEcCCCCCCCCCCCCCCCCChhhHHHHHHHHH-Hhc-CCeEEEecc
Confidence 155677788999999999999876432210 00 112234456778888 666 999999999
Q ss_pred cccCCCCC------CcceeeecCCCCccccCHHHHHHHHHHHhhCC--CCCCcEEEEecCC-cCHHHHHHHHHHHhhhc
Q 021854 235 VLQNTPGG------KQGFQFEEGCAANGSLSKEDAAFICVEALESI--PQTGLIFEVVNGE-EKVSDWKKCFSRLMEKT 304 (306)
Q Consensus 235 ~l~~~~~~------~~~~~~~~g~~~~~~Is~~DVA~~iv~aL~~~--~~~g~~~~v~~g~-~s~~d~~~l~~~l~~~~ 304 (306)
++...... ........++....+++++|+|++++.+++++ ...+++|++++++ .++.|+.+++.++.+..
T Consensus 156 ~v~G~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~i~~~~g~~ 234 (286)
T 3gpi_A 156 GIYGPGRLRMIRQAQTPEQWPARNAWTNRIHRDDGAAFIAYLIQQRSHAVPERLYIVTDNQPLPVHDLLRWLADRQGIA 234 (286)
T ss_dssp EEEBTTBCHHHHHTTCGGGSCSSBCEECEEEHHHHHHHHHHHHHHHTTSCCCSEEEECCSCCEEHHHHHHHHHHHTTCC
T ss_pred cccCCCchhHHHHHHhcccCCCcCceeEEEEHHHHHHHHHHHHhhhccCCCCceEEEeCCCCCCHHHHHHHHHHHcCCC
Confidence 86533211 00111234455578899999999999999875 4568899999865 68999999999887754
|
| >3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.90 E-value=4.5e-23 Score=188.76 Aligned_cols=203 Identities=15% Similarity=0.096 Sum_probs=145.5
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcCCch----
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEGF---- 174 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~g~---- 174 (306)
+|+||||||+|+||++++++|+++| .++++.|......+.....++++.+|+.| +.+.++++++|+|||+++..
T Consensus 1 M~~vlVTGatG~iG~~l~~~L~~~g-~~v~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~d~vih~a~~~~~~~ 78 (313)
T 3ehe_A 1 MSLIVVTGGAGFIGSHVVDKLSESN-EIVVIDNLSSGNEEFVNEAARLVKADLAA-DDIKDYLKGAEEVWHIAANPDVRI 78 (313)
T ss_dssp --CEEEETTTSHHHHHHHHHHTTTS-CEEEECCCSSCCGGGSCTTEEEECCCTTT-SCCHHHHTTCSEEEECCCCCCCC-
T ss_pred CCEEEEECCCchHHHHHHHHHHhCC-CEEEEEcCCCCChhhcCCCcEEEECcCCh-HHHHHHhcCCCEEEECCCCCChhh
Confidence 3689999999999999999999999 55555554433333345678999999999 99999999999999984310
Q ss_pred ------------------hhhcccccCCCEEEEecCcccccCCCCc-----cccc-chHHHHHHHHHHHHHH----hcCC
Q 021854 175 ------------------ISNAGSLKGVQHVILLSQLSVYRGSGGI-----QALM-KGNARKLAEQDESMLM----ASGI 226 (306)
Q Consensus 175 ------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~-----~~~~-~~~a~~~~~~aE~~l~----~sgi 226 (306)
+.+++.+.++++||++||.++|...... .+.. ...+...|..+|.+++ +.++
T Consensus 79 ~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~g~ 158 (313)
T 3ehe_A 79 GAENPDEIYRNNVLATYRLLEAMRKAGVSRIVFTSTSTVYGEAKVIPTPEDYPTHPISLYGASKLACEALIESYCHTFDM 158 (313)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEECCGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHTTC
T ss_pred hhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCchHHhCcCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCC
Confidence 4456777899999999999988532210 0000 1123334555566554 4699
Q ss_pred CEEEEEcCcccCCCCC-------------C-cce-eeecCCCCccccCHHHHHHHHHHHhhCCCCCCcEEEEecCC-cCH
Q 021854 227 PYTIIRTGVLQNTPGG-------------K-QGF-QFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVVNGE-EKV 290 (306)
Q Consensus 227 ~~tiiRPg~l~~~~~~-------------~-~~~-~~~~g~~~~~~Is~~DVA~~iv~aL~~~~~~g~~~~v~~g~-~s~ 290 (306)
+++++||+.+...... + ..+ .++.++....+++++|+|++++.+++ +...+++|++++++ .++
T Consensus 159 ~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~-~~~~~~~~ni~~~~~~s~ 237 (313)
T 3ehe_A 159 QAWIYRFANVIGRRSTHGVIYDFIMKLKRNPEELEILGNGEQNKSYIYISDCVDAMLFGLR-GDERVNIFNIGSEDQIKV 237 (313)
T ss_dssp EEEEEECSCEESTTCCCSHHHHHHHHHHHCTTEEEESTTSCCEECCEEHHHHHHHHHHHTT-CCSSEEEEECCCSCCEEH
T ss_pred CEEEEeeccccCcCCCcChHHHHHHHHHcCCCceEEeCCCCeEEeEEEHHHHHHHHHHHhc-cCCCCceEEECCCCCeeH
Confidence 9999999996533211 1 112 23445556789999999999999998 44557899999875 589
Q ss_pred HHHHHHHHHHhhhc
Q 021854 291 SDWKKCFSRLMEKT 304 (306)
Q Consensus 291 ~d~~~l~~~l~~~~ 304 (306)
.|+.+++.+..+..
T Consensus 238 ~e~~~~i~~~~g~~ 251 (313)
T 3ehe_A 238 KRIAEIVCEELGLS 251 (313)
T ss_dssp HHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHhCCC
Confidence 99999998887653
|
| >3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.90 E-value=9.2e-23 Score=188.49 Aligned_cols=207 Identities=15% Similarity=0.144 Sum_probs=151.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhh-------hcCCCceeeeccCCCHHHHHHHhc--CccEEE
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME-------SFGTYVESMAGDASNKKFLKTALR--GVRSII 168 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~-------~~~~~v~~v~~D~~d~~~l~~~~~--~~d~vi 168 (306)
++|+||||||+|+||++++++|+++|++|+++.|+.++..+ ..+.+++++.+|++|.+++.++++ ++|+||
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vi 83 (341)
T 3enk_A 4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDAHPITAAI 83 (341)
T ss_dssp SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHHSCCCEEE
T ss_pred CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhccCCcEEE
Confidence 46899999999999999999999999999999998765322 124578999999999999999998 899999
Q ss_pred EcCCch----------------------hhhcccccCCCEEEEecCcccccCCCCc-----ccccc-hHHHHHHHHHHHH
Q 021854 169 CPSEGF----------------------ISNAGSLKGVQHVILLSQLSVYRGSGGI-----QALMK-GNARKLAEQDESM 220 (306)
Q Consensus 169 ~~~~g~----------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~-----~~~~~-~~a~~~~~~aE~~ 220 (306)
|+++.. +.+++++.++++||++||.+++...... ....+ ..+...|..+|.+
T Consensus 84 h~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~ 163 (341)
T 3enk_A 84 HFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERAVKRIVFSSSATVYGVPERSPIDETFPLSATNPYGQTKLMAEQI 163 (341)
T ss_dssp ECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGBCSCSSSSBCTTSCCBCSSHHHHHHHHHHHH
T ss_pred ECccccccCccccChHHHHHHHHHHHHHHHHHHHhCCCCEEEEEecceEecCCCCCCCCCCCCCCCCChhHHHHHHHHHH
Confidence 984410 3456777889999999999887532211 00001 1233345566666
Q ss_pred HHh----c-CCCEEEEEcCcccCCCC-------------------------CCccee-ee------cCCCCccccCHHHH
Q 021854 221 LMA----S-GIPYTIIRTGVLQNTPG-------------------------GKQGFQ-FE------EGCAANGSLSKEDA 263 (306)
Q Consensus 221 l~~----s-gi~~tiiRPg~l~~~~~-------------------------~~~~~~-~~------~g~~~~~~Is~~DV 263 (306)
++. . +++++++||+.+..... ....+. ++ .++....+++++|+
T Consensus 164 ~~~~~~~~~~~~~~~lRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~Dv 243 (341)
T 3enk_A 164 LRDVEAADPSWRVATLRYFNPVGAHESGLIGEDPAGIPNNLMPYVAQVAVGKLEKLRVFGSDYPTPDGTGVRDYIHVVDL 243 (341)
T ss_dssp HHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCSSHHHHHHHHHHTSSSCEEEECSCSSSTTSSCEECEEEHHHH
T ss_pred HHHHhhcCCCceEEEEeeccccCCccccccCCCcccCccchHHHHHHHHhcCCCceEEeCCccCCCCCCeeEeeEEHHHH
Confidence 553 3 59999999988543210 001111 12 34555789999999
Q ss_pred HHHHHHHhhCC--CCCCcEEEEecCC-cCHHHHHHHHHHHhhhc
Q 021854 264 AFICVEALESI--PQTGLIFEVVNGE-EKVSDWKKCFSRLMEKT 304 (306)
Q Consensus 264 A~~iv~aL~~~--~~~g~~~~v~~g~-~s~~d~~~l~~~l~~~~ 304 (306)
|++++.+++.+ ...+++|++++++ .++.|+.+.+.++.++.
T Consensus 244 a~a~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~ 287 (341)
T 3enk_A 244 ARGHIAALDALERRDASLTVNLGTGRGYSVLEVVRAFEKASGRA 287 (341)
T ss_dssp HHHHHHHHHHHHHHTSCEEEEESCSCCEEHHHHHHHHHHHHCSC
T ss_pred HHHHHHHHHhhhcCCcceEEEeCCCCceeHHHHHHHHHHHhCCC
Confidence 99999999863 3568899999866 58999999999887654
|
| >2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus} | Back alignment and structure |
|---|
Probab=99.90 E-value=5.6e-23 Score=188.38 Aligned_cols=203 Identities=11% Similarity=0.007 Sum_probs=146.7
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcC--ccEEEEcCCc
Q 021854 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRG--VRSIICPSEG 173 (306)
Q Consensus 96 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~--~d~vi~~~~g 173 (306)
..+.++||||||+|+||++++++|+++|++|++++|+.+. .. . +++++.+|++|.+.+.+++++ +|+|||+++.
T Consensus 9 ~~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~-l--~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~ 84 (321)
T 2pk3_A 9 HHGSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-KL-P--NVEMISLDIMDSQRVKKVISDIKPDYIFHLAAK 84 (321)
T ss_dssp ----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-CC-T--TEEEEECCTTCHHHHHHHHHHHCCSEEEECCSC
T ss_pred ccCcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-cc-c--eeeEEECCCCCHHHHHHHHHhcCCCEEEEcCcc
Confidence 4457999999999999999999999999999999998765 22 2 688999999999999999986 8999998431
Q ss_pred h----------------------hhhccccc-CCCEEEEecCcccccCC--CC--c----ccccchHHHHHHHHHHHHHH
Q 021854 174 F----------------------ISNAGSLK-GVQHVILLSQLSVYRGS--GG--I----QALMKGNARKLAEQDESMLM 222 (306)
Q Consensus 174 ~----------------------~~~~a~~~-gvkr~V~iSS~~~~~~~--~~--~----~~~~~~~a~~~~~~aE~~l~ 222 (306)
. +.+++.+. ++++||++||..++... .. . .......+...|..+|.+++
T Consensus 85 ~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~ 164 (321)
T 2pk3_A 85 SSVKDSWLNKKGTFSTNVFGTLHVLDAVRDSNLDCRILTIGSSEEYGMILPEESPVSEENQLRPMSPYGVSKASVGMLAR 164 (321)
T ss_dssp CCHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEEGGGTBSCCGGGCSBCTTSCCBCCSHHHHHHHHHHHHHH
T ss_pred cchhhhhhcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEccHHhcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHH
Confidence 0 33445554 69999999999887543 00 0 00001123334556666665
Q ss_pred h----cCCCEEEEEcCcccCCCCC-----------------C--cce-eeecCCCCccccCHHHHHHHHHHHhhCCCCCC
Q 021854 223 A----SGIPYTIIRTGVLQNTPGG-----------------K--QGF-QFEEGCAANGSLSKEDAAFICVEALESIPQTG 278 (306)
Q Consensus 223 ~----sgi~~tiiRPg~l~~~~~~-----------------~--~~~-~~~~g~~~~~~Is~~DVA~~iv~aL~~~~~~g 278 (306)
. .+++++++||+++...... + ..+ .++.++....+++++|+|++++.++.++ ..+
T Consensus 165 ~~~~~~gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~-~~g 243 (321)
T 2pk3_A 165 QYVKAYGMDIIHTRTFNHIGPGQSLGFVTQDFAKQIVDIEMEKQEPIIKVGNLEAVRDFTDVRDIVQAYWLLSQYG-KTG 243 (321)
T ss_dssp HHHHHHCCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHHTTSSCSEEEESCSSCEEEEEEHHHHHHHHHHHHHHC-CTT
T ss_pred HHHHHcCCCEEEEEeCcccCcCCCCCchHHHHHHHHHHHhcCCCCCeEEeCCCCcEEeeEEHHHHHHHHHHHHhCC-CCC
Confidence 4 4999999999985532211 1 111 2234445567899999999999999876 457
Q ss_pred cEEEEecCC-cCHHHHHHHHHHHhhh
Q 021854 279 LIFEVVNGE-EKVSDWKKCFSRLMEK 303 (306)
Q Consensus 279 ~~~~v~~g~-~s~~d~~~l~~~l~~~ 303 (306)
++|+++++. .++.|+.+++.++.+.
T Consensus 244 ~~~~i~~~~~~s~~e~~~~i~~~~g~ 269 (321)
T 2pk3_A 244 DVYNVCSGIGTRIQDVLDLLLAMANV 269 (321)
T ss_dssp CEEEESCSCEEEHHHHHHHHHHHSSS
T ss_pred CeEEeCCCCCeeHHHHHHHHHHHhCC
Confidence 899999875 5899999999887654
|
| >2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=1.2e-22 Score=191.21 Aligned_cols=206 Identities=11% Similarity=0.054 Sum_probs=147.8
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCC-CeEEEEecCcchhhhhc--CCCceeeeccCCCHHHHHHHhcCccEEEEcCCc
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAMESF--GTYVESMAGDASNKKFLKTALRGVRSIICPSEG 173 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~l~R~~~~~~~~~--~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~g 173 (306)
..+|+||||||+|+||++++++|+++| ++|++++|+.+...+.. ..+++++.+|+.|.+.+.++++++|+|||+++.
T Consensus 30 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~l~~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vih~A~~ 109 (377)
T 2q1s_A 30 LANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKINVPDHPAVRFSETSITDDALLASLQDEYDYVFHLATY 109 (377)
T ss_dssp GTTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGGGSCCCTTEEEECSCTTCHHHHHHCCSCCSEEEECCCC
T ss_pred hCCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchhhccCCCceEEEECCCCCHHHHHHHhhCCCEEEECCCc
Confidence 346899999999999999999999999 99999999876532222 357899999999999999999999999998431
Q ss_pred h----------------------hhhccccc-CCCEEEEecCcccccCCCC--cc--------c--ccchHHHHHHHHHH
Q 021854 174 F----------------------ISNAGSLK-GVQHVILLSQLSVYRGSGG--IQ--------A--LMKGNARKLAEQDE 218 (306)
Q Consensus 174 ~----------------------~~~~a~~~-gvkr~V~iSS~~~~~~~~~--~~--------~--~~~~~a~~~~~~aE 218 (306)
. +++++.+. ++++||++||.++|..... .. + .....+...|..+|
T Consensus 110 ~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~V~~SS~~vyg~~~~~~~~~~E~~~~~~~~~~~~~Y~~sK~~~E 189 (377)
T 2q1s_A 110 HGNQSSIHDPLADHENNTLTTLKLYERLKHFKRLKKVVYSAAGCSIAEKTFDDAKATEETDIVSLHNNDSPYSMSKIFGE 189 (377)
T ss_dssp SCHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSSCCEEEEEEEC--------------CCCCCCCSSCCCSHHHHHHHHHH
T ss_pred cCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCCHHHcCCCCCCCcCcccccccccccCCCCchHHHHHHHH
Confidence 1 34556777 8999999999887742110 00 0 01112334455666
Q ss_pred HHHHh----cCCCEEEEEcCcccCCCC---------C------------------Cccee-eecCCCCccccCHHHHHHH
Q 021854 219 SMLMA----SGIPYTIIRTGVLQNTPG---------G------------------KQGFQ-FEEGCAANGSLSKEDAAFI 266 (306)
Q Consensus 219 ~~l~~----sgi~~tiiRPg~l~~~~~---------~------------------~~~~~-~~~g~~~~~~Is~~DVA~~ 266 (306)
.+++. .+++++++||+.+..... . +..+. ++.++....+++++|+|++
T Consensus 190 ~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~a 269 (377)
T 2q1s_A 190 FYSVYYHKQHQLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYKALKGMPLPLENGGVATRDFIFVEDVANG 269 (377)
T ss_dssp HHHHHHHHHHCCCEEEEEECCEECTTCCTTCSSCCSSGGGTSCSHHHHHHHHHHTTCCCCCSGGGCCEECCEEHHHHHHH
T ss_pred HHHHHHHHHhCCCEEEEeeccEECCCCcccccccccCcccccccHHHHHHHHHHcCCCeEEeCCCCeEEeeEEHHHHHHH
Confidence 66653 599999999999653221 1 11111 2234455788999999999
Q ss_pred -HHHHhhCCCCCCcEEEEecCC-cCHHHHHHHHHHHhhhc
Q 021854 267 -CVEALESIPQTGLIFEVVNGE-EKVSDWKKCFSRLMEKT 304 (306)
Q Consensus 267 -iv~aL~~~~~~g~~~~v~~g~-~s~~d~~~l~~~l~~~~ 304 (306)
++.+++.+. .+ +|++++++ .++.|+.+++.++.+..
T Consensus 270 ~i~~~~~~~~-~g-~~~i~~~~~~s~~e~~~~i~~~~g~~ 307 (377)
T 2q1s_A 270 LIACAADGTP-GG-VYNIASGKETSIADLATKINEITGNN 307 (377)
T ss_dssp HHHHHHHCCT-TE-EEECCCCCCEEHHHHHHHHHHHHTCC
T ss_pred HHHHHHhcCC-CC-eEEecCCCceeHHHHHHHHHHHhCCC
Confidence 999998765 56 99999865 58999999999887653
|
| >2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.90 E-value=1.4e-22 Score=186.54 Aligned_cols=205 Identities=14% Similarity=0.182 Sum_probs=148.4
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhc--CccEEEEcCCch--
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--GVRSIICPSEGF-- 174 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~--~~d~vi~~~~g~-- 174 (306)
+|+||||||+|+||++++++|+++|++|++++|+.....+....+++++.+|+.|.+.+.++++ ++|+|||+++..
T Consensus 1 M~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vih~a~~~~~ 80 (330)
T 2c20_A 1 MNSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHEDAITEGAKFYNGDLRDKAFLRDVFTQENIEAVMHFAADSLV 80 (330)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSCTTSEEEECCTTCHHHHHHHHHHSCEEEEEECCCCCCH
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCchhhcCCCcEEEECCCCCHHHHHHHHhhcCCCEEEECCcccCc
Confidence 3789999999999999999999999999999998755433344478999999999999999998 899999984310
Q ss_pred --------------------hhhcccccCCCEEEEecCcccccCCCC--c---ccc-cchHHHHHHHHHHHHHHh----c
Q 021854 175 --------------------ISNAGSLKGVQHVILLSQLSVYRGSGG--I---QAL-MKGNARKLAEQDESMLMA----S 224 (306)
Q Consensus 175 --------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~--~---~~~-~~~~a~~~~~~aE~~l~~----s 224 (306)
+.+++.+.++++||++||.+++..... . ... ....+...|..+|.+++. .
T Consensus 81 ~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~ 160 (330)
T 2c20_A 81 GVSMEKPLQYYNNNVYGALCLLEVMDEFKVDKFIFSSTAATYGEVDVDLITEETMTNPTNTYGETKLAIEKMLHWYSQAS 160 (330)
T ss_dssp HHHHHSHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGGCSCSSSSBCTTSCCCCSSHHHHHHHHHHHHHHHHHHTS
T ss_pred cccccCHHHHHHHHhHHHHHHHHHHHHcCCCEEEEeCCceeeCCCCCCCCCcCCCCCCCChHHHHHHHHHHHHHHHHHHh
Confidence 345567789999999999988763221 0 000 011233345566666543 5
Q ss_pred CCCEEEEEcCcccCCC-C-----------------------CCcceee-e------cCCCCccccCHHHHHHHHHHHhhC
Q 021854 225 GIPYTIIRTGVLQNTP-G-----------------------GKQGFQF-E------EGCAANGSLSKEDAAFICVEALES 273 (306)
Q Consensus 225 gi~~tiiRPg~l~~~~-~-----------------------~~~~~~~-~------~g~~~~~~Is~~DVA~~iv~aL~~ 273 (306)
+++++++||+.+.... . ....+.+ + .++....+++++|+|++++.+++.
T Consensus 161 ~~~~~ilrp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~v~Dva~a~~~~~~~ 240 (330)
T 2c20_A 161 NLRYKIFRYFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDGTCIRDYIHVEDLVAAHFLGLKD 240 (330)
T ss_dssp SCEEEEEECSEEECCCTTCSSCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCCSSSSSSCEECEEEHHHHHHHHHHHHHH
T ss_pred CCcEEEEecCcccCCCCcCccccccccccchHHHHHHHHhhcCCCeEEeCCccccCCCceeEeeEeHHHHHHHHHHHHhc
Confidence 8999999998754221 0 0011111 1 234446789999999999999986
Q ss_pred CCC--CCcEEEEecCC-cCHHHHHHHHHHHhhh
Q 021854 274 IPQ--TGLIFEVVNGE-EKVSDWKKCFSRLMEK 303 (306)
Q Consensus 274 ~~~--~g~~~~v~~g~-~s~~d~~~l~~~l~~~ 303 (306)
+.. .+++|++++++ .++.|+.+++.++.+.
T Consensus 241 ~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~ 273 (330)
T 2c20_A 241 LQNGGESDFYNLGNGNGFSVKEIVDAVREVTNH 273 (330)
T ss_dssp HHTTCCCEEEECCCTTCBCHHHHHHHHHHHTTS
T ss_pred cccCCCCCeEEeCCCCCccHHHHHHHHHHHhCC
Confidence 532 36899999865 6899999999887754
|
| >2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=1.9e-22 Score=186.38 Aligned_cols=204 Identities=15% Similarity=0.180 Sum_probs=151.5
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcC--CCceeeeccCCCHHHHHHHhc--CccEEEEcC
Q 021854 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG--TYVESMAGDASNKKFLKTALR--GVRSIICPS 171 (306)
Q Consensus 96 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~--~~v~~v~~D~~d~~~l~~~~~--~~d~vi~~~ 171 (306)
...+|+||||||+|+||++++++|+++|++|++++|+.+...+... .+++++.+|++|.+++.++++ ++|+|||++
T Consensus 17 ~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~l~~v~~~~~Dl~d~~~~~~~~~~~~~D~vih~A 96 (330)
T 2pzm_A 17 RGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPVAGLSVIEGSVTDAGLLERAFDSFKPTHVVHSA 96 (330)
T ss_dssp TTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCSCTTEEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhccCCceEEEeeCCCHHHHHHHHhhcCCCEEEECC
Confidence 3456899999999999999999999999999999997654321111 468899999999999999999 999999984
Q ss_pred Cc-------------------hhhhcccccCCCEEEEecCcccccCCCCc-ccc-----cchHHHHHHHHHHHHHHhcCC
Q 021854 172 EG-------------------FISNAGSLKGVQHVILLSQLSVYRGSGGI-QAL-----MKGNARKLAEQDESMLMASGI 226 (306)
Q Consensus 172 ~g-------------------~~~~~a~~~gvkr~V~iSS~~~~~~~~~~-~~~-----~~~~a~~~~~~aE~~l~~sgi 226 (306)
+. .+.+++.+.++++||++||.+++...... ..+ ....+...|..+|.+++..++
T Consensus 97 ~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~~~~~~~~~~~~~~E~~~~~~~Y~~sK~~~e~~~~~~~~ 176 (330)
T 2pzm_A 97 AAYKDPDDWAEDAATNVQGSINVAKAASKAGVKRLLNFQTALCYGRPATVPIPIDSPTAPFTSYGISKTAGEAFLMMSDV 176 (330)
T ss_dssp CCCSCTTCHHHHHHHHTHHHHHHHHHHHHHTCSEEEEEEEGGGGCSCSSSSBCTTCCCCCCSHHHHHHHHHHHHHHTCSS
T ss_pred ccCCCccccChhHHHHHHHHHHHHHHHHHcCCCEEEEecCHHHhCCCccCCCCcCCCCCCCChHHHHHHHHHHHHHHcCC
Confidence 31 13455667889999999999887643210 000 111233456778888888899
Q ss_pred CEEEEEcCcccCCCCC-------------CcceeeecCCCCccccCHHHHHH-HHHHHhhCCCCCCcEEEEecCC-cCHH
Q 021854 227 PYTIIRTGVLQNTPGG-------------KQGFQFEEGCAANGSLSKEDAAF-ICVEALESIPQTGLIFEVVNGE-EKVS 291 (306)
Q Consensus 227 ~~tiiRPg~l~~~~~~-------------~~~~~~~~g~~~~~~Is~~DVA~-~iv~aL~~~~~~g~~~~v~~g~-~s~~ 291 (306)
++++|||+.+...... +. ..+..+. ...+++++|+|+ +++.+++++. +++|+++++. .++.
T Consensus 177 ~~~~iR~~~v~gp~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~i~~~Dva~~a~~~~~~~~~--g~~~~v~~~~~~s~~ 252 (330)
T 2pzm_A 177 PVVSLRLANVTGPRLAIGPIPTFYKRLKAGQ-KCFCSDT-VRDFLDMSDFLAIADLSLQEGRP--TGVFNVSTGEGHSIK 252 (330)
T ss_dssp CEEEEEECEEECTTCCSSHHHHHHHHHHTTC-CCCEESC-EECEEEHHHHHHHHHHHTSTTCC--CEEEEESCSCCEEHH
T ss_pred CEEEEeeeeeECcCCCCCHHHHHHHHHHcCC-EEeCCCC-EecceeHHHHHHHHHHHHhhcCC--CCEEEeCCCCCCCHH
Confidence 9999998875422110 11 1223333 567899999999 9999998754 8899999865 5899
Q ss_pred HHHHHHHHHhhh
Q 021854 292 DWKKCFSRLMEK 303 (306)
Q Consensus 292 d~~~l~~~l~~~ 303 (306)
|+.+++.++.+.
T Consensus 253 e~~~~i~~~~g~ 264 (330)
T 2pzm_A 253 EVFDVVLDYVGA 264 (330)
T ss_dssp HHHHHHHHHHTC
T ss_pred HHHHHHHHHhCC
Confidence 999999887764
|
| >1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=2.3e-22 Score=187.32 Aligned_cols=206 Identities=12% Similarity=0.029 Sum_probs=149.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh-----cCCCceeeeccCCCHHHHHHHhcC--ccEEEEc
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-----FGTYVESMAGDASNKKFLKTALRG--VRSIICP 170 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~-----~~~~v~~v~~D~~d~~~l~~~~~~--~d~vi~~ 170 (306)
.+|+||||||+|+||++++++|+++|++|++++|+.++.... ...+++++.+|+.|.+.+.+++++ +|+|||+
T Consensus 8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~ 87 (357)
T 1rkx_A 8 QGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREFQPEIVFHM 87 (357)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred CCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhccCCceEEEEccccCHHHHHHHHHhcCCCEEEEC
Confidence 468999999999999999999999999999999987653221 134789999999999999999987 7999998
Q ss_pred CCch----------------------hhhcccccC-CCEEEEecCcccccCCCC---cc---cc-cchHHHHHHHHHHHH
Q 021854 171 SEGF----------------------ISNAGSLKG-VQHVILLSQLSVYRGSGG---IQ---AL-MKGNARKLAEQDESM 220 (306)
Q Consensus 171 ~~g~----------------------~~~~a~~~g-vkr~V~iSS~~~~~~~~~---~~---~~-~~~~a~~~~~~aE~~ 220 (306)
++.. +.+++.+.+ +++||++||..+|..... .. .. ....+...|..+|.+
T Consensus 88 A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~ 167 (357)
T 1rkx_A 88 AAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWIWGYRENEAMGGYDPYSNSKGCAELV 167 (357)
T ss_dssp CSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCSSSCBCTTSCBCCSSHHHHHHHHHHHH
T ss_pred CCCcccccchhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEecCHHHhCCCCcCCCCCCCCCCCCCCccHHHHHHHHHH
Confidence 5410 334555555 899999999988753321 10 00 111233345566666
Q ss_pred HHh-------------cCCCEEEEEcCcccCCCC---------------CCcceeeecCCCCccccCHHHHHHHHHHHhh
Q 021854 221 LMA-------------SGIPYTIIRTGVLQNTPG---------------GKQGFQFEEGCAANGSLSKEDAAFICVEALE 272 (306)
Q Consensus 221 l~~-------------sgi~~tiiRPg~l~~~~~---------------~~~~~~~~~g~~~~~~Is~~DVA~~iv~aL~ 272 (306)
++. .+++++++||+++..... .+..+.+..++....+++++|+|++++.++.
T Consensus 168 ~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~v~v~Dva~a~~~~~~ 247 (357)
T 1rkx_A 168 TSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVIIRNPHAIRPWQHVLEPLSGYLLLAQ 247 (357)
T ss_dssp HHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCEECSCTTCEECCEETHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhhccccCCceEEEEeeceeeCCCCCccccHHHHHHHHHhcCCCEEECCCCCeeccEeHHHHHHHHHHHHH
Confidence 543 299999999999653221 1222333334455689999999999999987
Q ss_pred C----CCCCCcEEEEecC---CcCHHHHHHHHHHHhhh
Q 021854 273 S----IPQTGLIFEVVNG---EEKVSDWKKCFSRLMEK 303 (306)
Q Consensus 273 ~----~~~~g~~~~v~~g---~~s~~d~~~l~~~l~~~ 303 (306)
. +...+++|+++++ +.++.|+.+++.++.+.
T Consensus 248 ~~~~~~~~~~~~~ni~~~~~~~~s~~e~~~~i~~~~g~ 285 (357)
T 1rkx_A 248 KLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWGE 285 (357)
T ss_dssp HHHHTCGGGCSEEECCCCGGGCEEHHHHHHHHHHHHCT
T ss_pred hhhhcCCCCCceEEECCCCCCcccHHHHHHHHHHHhCC
Confidence 4 2345789999974 45899999999887764
|
| >2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A | Back alignment and structure |
|---|
Probab=99.90 E-value=3.4e-22 Score=184.62 Aligned_cols=203 Identities=13% Similarity=0.080 Sum_probs=148.3
Q ss_pred CeEEEEcCCChHHHHHHHHHHHC-CCeEEEEecCcchhhhhc-CCCceeeeccCCC-HHHHHHHhcCccEEEEcCC--c-
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVK-RTRIKALVKDKRNAMESF-GTYVESMAGDASN-KKFLKTALRGVRSIICPSE--G- 173 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~-g~~V~~l~R~~~~~~~~~-~~~v~~v~~D~~d-~~~l~~~~~~~d~vi~~~~--g- 173 (306)
|+||||||+|+||++++++|+++ |++|++++|+.++..... ..+++++.+|+.| .+.++++++++|+|||+++ .
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~d~vih~A~~~~~ 80 (345)
T 2bll_A 1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLVAIATP 80 (345)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTCSHHHHHHHHHCSEEEECBCCCCH
T ss_pred CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhhcCCCeEEEeccccCcHHHHHhhccCCCEEEEcccccCc
Confidence 58999999999999999999998 899999999987654432 2478999999998 4678889999999999833 1
Q ss_pred -------------------hhhhcccccCCCEEEEecCcccccCCCCcc-----------c--ccchHHHHHHHHHHHHH
Q 021854 174 -------------------FISNAGSLKGVQHVILLSQLSVYRGSGGIQ-----------A--LMKGNARKLAEQDESML 221 (306)
Q Consensus 174 -------------------~~~~~a~~~gvkr~V~iSS~~~~~~~~~~~-----------~--~~~~~a~~~~~~aE~~l 221 (306)
.+.+++.+.+ ++||++||.+++....... + .....+...|..+|.++
T Consensus 81 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~v~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~e~~~ 159 (345)
T 2bll_A 81 IEYTRNPLRVFELDFEENLRIIRYCVKYR-KRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVI 159 (345)
T ss_dssp HHHHHSHHHHHHHHTHHHHHHHHHHHHTT-CEEEEECCGGGGBTCCCSSBCTTTCCCBCCCTTCGGGHHHHHHHHHHHHH
T ss_pred cchhcCHHHHHHHHHHHHHHHHHHHHHhC-CeEEEEecHHHcCCCCCCCcCCcccccccCcccCcccccHHHHHHHHHHH
Confidence 0344566677 8999999998875422110 0 00012333455666666
Q ss_pred H----hcCCCEEEEEcCcccCCCCC----------------------Cccee-eecCCCCccccCHHHHHHHHHHHhhCC
Q 021854 222 M----ASGIPYTIIRTGVLQNTPGG----------------------KQGFQ-FEEGCAANGSLSKEDAAFICVEALESI 274 (306)
Q Consensus 222 ~----~sgi~~tiiRPg~l~~~~~~----------------------~~~~~-~~~g~~~~~~Is~~DVA~~iv~aL~~~ 274 (306)
+ +.+++++++||+.+...... +..+. ++.++....+++++|+|++++.+++.+
T Consensus 160 ~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~ 239 (345)
T 2bll_A 160 WAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRIIENA 239 (345)
T ss_dssp HHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEHHHHHHHHHHHHHCG
T ss_pred HHHHHhcCCCEEEEcCCcccCCCcccccccccccccHHHHHHHHHHcCCCcEEECCCCEEEEEEEHHHHHHHHHHHHhhc
Confidence 4 46999999999996432210 11121 233445568999999999999999876
Q ss_pred C--CCCcEEEEecCC--cCHHHHHHHHHHHhhh
Q 021854 275 P--QTGLIFEVVNGE--EKVSDWKKCFSRLMEK 303 (306)
Q Consensus 275 ~--~~g~~~~v~~g~--~s~~d~~~l~~~l~~~ 303 (306)
. ..+++|+++++. .++.|+.+++.++.+.
T Consensus 240 ~~~~~g~~~~i~~~~~~~s~~e~~~~i~~~~g~ 272 (345)
T 2bll_A 240 GNRCDGEIINIGNPENEASIEELGEMLLASFEK 272 (345)
T ss_dssp GGTTTTEEEEECCTTSEEEHHHHHHHHHHHHHT
T ss_pred cccCCCceEEeCCCCCCCCHHHHHHHHHHHhCC
Confidence 4 467899999974 6899999999888764
|
| >2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} | Back alignment and structure |
|---|
Probab=99.89 E-value=4.4e-23 Score=188.15 Aligned_cols=203 Identities=12% Similarity=0.051 Sum_probs=147.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHC--CCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhc--CccEEEEcCCc
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVK--RTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--GVRSIICPSEG 173 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~--g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~--~~d~vi~~~~g 173 (306)
|+|+||||||+|+||++++++|+++ |++|++++|+..+.. ...+++++.+|+.|.+++.++++ ++|+|||+++.
T Consensus 1 M~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~--~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vih~a~~ 78 (312)
T 2yy7_A 1 MNPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTD--VVNSGPFEVVNALDFNQIEHLVEVHKITDIYLMAAL 78 (312)
T ss_dssp CCCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCH--HHHSSCEEECCTTCHHHHHHHHHHTTCCEEEECCCC
T ss_pred CCceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCcccc--ccCCCceEEecCCCHHHHHHHHhhcCCCEEEECCcc
Confidence 4689999999999999999999999 899999999876532 11357899999999999999998 89999998442
Q ss_pred ---------------------hhhhcccccCCCEEEEecCcccccCCCC---cc---cc-cchHHHHHHHHHHHHHH---
Q 021854 174 ---------------------FISNAGSLKGVQHVILLSQLSVYRGSGG---IQ---AL-MKGNARKLAEQDESMLM--- 222 (306)
Q Consensus 174 ---------------------~~~~~a~~~gvkr~V~iSS~~~~~~~~~---~~---~~-~~~~a~~~~~~aE~~l~--- 222 (306)
.+.+++.+.++++||++||.+++..... .. .. ....+...|..+|.+++
T Consensus 79 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~ 158 (312)
T 2yy7_A 79 LSATAEKNPAFAWDLNMNSLFHVLNLAKAKKIKKIFWPSSIAVFGPTTPKENTPQYTIMEPSTVYGISKQAGERWCEYYH 158 (312)
T ss_dssp CHHHHHHCHHHHHHHHHHHHHHHHHHHHTTSCSEEECCEEGGGCCTTSCSSSBCSSCBCCCCSHHHHHHHHHHHHHHHHH
T ss_pred CCCchhhChHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHHhCCCCCCCCccccCcCCCCchhHHHHHHHHHHHHHHH
Confidence 1345677789999999999988764221 00 00 01123334555565554
Q ss_pred -hcCCCEEEEEcCcccCC---CCC----------------CcceeeecCCCCccccCHHHHHHHHHHHhhCCCC---CCc
Q 021854 223 -ASGIPYTIIRTGVLQNT---PGG----------------KQGFQFEEGCAANGSLSKEDAAFICVEALESIPQ---TGL 279 (306)
Q Consensus 223 -~sgi~~tiiRPg~l~~~---~~~----------------~~~~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~~---~g~ 279 (306)
+.+++++++||+.+... +.. +....+..++....+++++|+|++++.+++++.. .++
T Consensus 159 ~~~~~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~ 238 (312)
T 2yy7_A 159 NIYGVDVRSIRYPGLISWSTPPGGGTTDYAVDIFYKAIADKKYECFLSSETKMPMMYMDDAIDATINIMKAPVEKIKIHS 238 (312)
T ss_dssp HHHCCEEECEEECEEECSSSCCCSCTTTHHHHHHHHHHHTSEEEESSCTTCCEEEEEHHHHHHHHHHHHHSCGGGCCCSS
T ss_pred HhcCCcEEEEeCCeEecCCCCCCCchhhhHHHHHHHHHcCCCeEEecCCCceeeeeeHHHHHHHHHHHHhCcccccccCc
Confidence 35899999999985532 111 1111123455567889999999999999987653 248
Q ss_pred EEEEecCCcCHHHHHHHHHHHhh
Q 021854 280 IFEVVNGEEKVSDWKKCFSRLME 302 (306)
Q Consensus 280 ~~~v~~g~~s~~d~~~l~~~l~~ 302 (306)
+|++++.+.++.|+.+++.++.+
T Consensus 239 ~~ni~~~~~s~~e~~~~i~~~~~ 261 (312)
T 2yy7_A 239 SYNLAAMSFTPTEIANEIKKHIP 261 (312)
T ss_dssp CEECCSEEECHHHHHHHHHTTCT
T ss_pred eEEeCCCccCHHHHHHHHHHHCC
Confidence 99999755688999888877654
|
| >2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=2e-22 Score=188.00 Aligned_cols=195 Identities=17% Similarity=0.232 Sum_probs=149.1
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHC-CC-eEEEEecCcchhhh---hc-CCCceeeeccCCCHHHHHHHhcCccEEEE
Q 021854 96 EEARDAVLVTDGDSDIGQMVILSLIVK-RT-RIKALVKDKRNAME---SF-GTYVESMAGDASNKKFLKTALRGVRSIIC 169 (306)
Q Consensus 96 ~~~~~~ilVtGatG~iG~~l~~~L~~~-g~-~V~~l~R~~~~~~~---~~-~~~v~~v~~D~~d~~~l~~~~~~~d~vi~ 169 (306)
...+|+||||||||+||++++++|++. |+ +|++++|+..+... .+ ..+++++.+|++|.+++.++++++|+|||
T Consensus 18 ~~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~D~Vih 97 (344)
T 2gn4_A 18 MLDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVRDLERLNYALEGVDICIH 97 (344)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHCCTTEEEEECCTTCHHHHHHHTTTCSEEEE
T ss_pred hhCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhcCCCEEEEECCCCCHHHHHHHHhcCCEEEE
Confidence 345799999999999999999999999 97 99999998866332 22 25789999999999999999999999999
Q ss_pred cCCc----------------------hhhhcccccCCCEEEEecCcccccCCCCcccccchHHHHHHHHHHHHHHh----
Q 021854 170 PSEG----------------------FISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMA---- 223 (306)
Q Consensus 170 ~~~g----------------------~~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~~~~~aE~~l~~---- 223 (306)
+++- .+++++.+.++++||++||..++.+. ..|. ..|..+|.+++.
T Consensus 98 ~Aa~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~~v~~~V~~SS~~~~~p~---~~Y~-----~sK~~~E~~~~~~~~~ 169 (344)
T 2gn4_A 98 AAALKHVPIAEYNPLECIKTNIMGASNVINACLKNAISQVIALSTDKAANPI---NLYG-----ATKLCSDKLFVSANNF 169 (344)
T ss_dssp CCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGGGSSCC---SHHH-----HHHHHHHHHHHHGGGC
T ss_pred CCCCCCCCchhcCHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecCCccCCCc---cHHH-----HHHHHHHHHHHHHHHH
Confidence 8431 14456777899999999998876542 3342 235566777654
Q ss_pred ---cCCCEEEEEcCcccCCCC-----------CCc-ceeeecCCCCccccCHHHHHHHHHHHhhCCCCCCcEEEEecCCc
Q 021854 224 ---SGIPYTIIRTGVLQNTPG-----------GKQ-GFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVVNGEE 288 (306)
Q Consensus 224 ---sgi~~tiiRPg~l~~~~~-----------~~~-~~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~~~g~~~~v~~g~~ 288 (306)
.+++++++|||.+..... .+. .+.+..+.....+++++|+|++++.+++.+. .+++|++.+++.
T Consensus 170 ~~~~g~~~~~vRpg~v~g~~~~~i~~~~~~~~~g~~~~~i~~~~~~r~~i~v~D~a~~v~~~l~~~~-~g~~~~~~~~~~ 248 (344)
T 2gn4_A 170 KGSSQTQFSVVRYGNVVGSRGSVVPFFKKLVQNKASEIPITDIRMTRFWITLDEGVSFVLKSLKRMH-GGEIFVPKIPSM 248 (344)
T ss_dssp CCSSCCEEEEECCCEETTCTTSHHHHHHHHHHHTCCCEEESCTTCEEEEECHHHHHHHHHHHHHHCC-SSCEEEECCCEE
T ss_pred hCCCCcEEEEEEeccEECCCCCHHHHHHHHHHcCCCceEEeCCCeEEeeEEHHHHHHHHHHHHhhcc-CCCEEecCCCcE
Confidence 479999999998654321 112 3334344444678999999999999998753 578999988777
Q ss_pred CHHHHHHHHHH
Q 021854 289 KVSDWKKCFSR 299 (306)
Q Consensus 289 s~~d~~~l~~~ 299 (306)
++.|+.+.+.+
T Consensus 249 s~~el~~~i~~ 259 (344)
T 2gn4_A 249 KMTDLAKALAP 259 (344)
T ss_dssp EHHHHHHHHCT
T ss_pred EHHHHHHHHHH
Confidence 88888887764
|
| >1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=4.2e-22 Score=184.56 Aligned_cols=205 Identities=17% Similarity=0.148 Sum_probs=145.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcch----------hhh---hcCCCceeeeccCCCHHHHHHHhc--
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN----------AME---SFGTYVESMAGDASNKKFLKTALR-- 162 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~----------~~~---~~~~~v~~v~~D~~d~~~l~~~~~-- 162 (306)
|+|+||||||+|+||++++++|+++|++|++++|.... ... ..+.+++++.+|++|.+++.++++
T Consensus 1 M~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 80 (348)
T 1ek6_A 1 MAEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKY 80 (348)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCHHHHHHHHHhc
Confidence 46899999999999999999999999999999886432 111 124578999999999999999998
Q ss_pred CccEEEEcCCch----------------------hhhcccccCCCEEEEecCcccccCCC--------CcccccchHHHH
Q 021854 163 GVRSIICPSEGF----------------------ISNAGSLKGVQHVILLSQLSVYRGSG--------GIQALMKGNARK 212 (306)
Q Consensus 163 ~~d~vi~~~~g~----------------------~~~~a~~~gvkr~V~iSS~~~~~~~~--------~~~~~~~~~a~~ 212 (306)
++|+|||+++.. +.+++++.++++||++||.+++.... +..+. ...+..
T Consensus 81 ~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~E~~~~~p~-~~~Y~~ 159 (348)
T 1ek6_A 81 SFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGC-TNPYGK 159 (348)
T ss_dssp CEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCC-SSHHHH
T ss_pred CCCEEEECCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHhCCCEEEEECcHHHhCCCCCCCcCCCCCCCCC-CCchHH
Confidence 899999984310 34556678899999999998875321 10010 112333
Q ss_pred HHHHHHHHHHh---cC--CCEEEEEcCcccCCC-------------C------------CCcceee-e------cCCCCc
Q 021854 213 LAEQDESMLMA---SG--IPYTIIRTGVLQNTP-------------G------------GKQGFQF-E------EGCAAN 255 (306)
Q Consensus 213 ~~~~aE~~l~~---sg--i~~tiiRPg~l~~~~-------------~------------~~~~~~~-~------~g~~~~ 255 (306)
.|..+|.+++. .+ ++++++||+.+.... . .+..+.+ + .++...
T Consensus 160 sK~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~ 239 (348)
T 1ek6_A 160 SKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVR 239 (348)
T ss_dssp HHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEE
T ss_pred HHHHHHHHHHHHHhcCCCcceEEEeeccccCCCcccccCcCcccchhhHHHHHHHHHHhcCCCeEEeCCcccCCCCceEE
Confidence 45556666543 24 999999998754221 0 0111111 1 234446
Q ss_pred cccCHHHHHHHHHHHhhCCC-CCC-cEEEEecCC-cCHHHHHHHHHHHhhh
Q 021854 256 GSLSKEDAAFICVEALESIP-QTG-LIFEVVNGE-EKVSDWKKCFSRLMEK 303 (306)
Q Consensus 256 ~~Is~~DVA~~iv~aL~~~~-~~g-~~~~v~~g~-~s~~d~~~l~~~l~~~ 303 (306)
.+++++|+|++++.+++.+. ..+ ++|++++++ .++.|+.+++.++.+.
T Consensus 240 ~~i~v~Dva~a~~~~~~~~~~~~g~~~~ni~~~~~~s~~e~~~~i~~~~g~ 290 (348)
T 1ek6_A 240 DYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGK 290 (348)
T ss_dssp CEEEHHHHHHHHHHHHHHHTTTCCEEEEEECCSCCEEHHHHHHHHHHHHCS
T ss_pred eeEEHHHHHHHHHHHHhcccccCCceEEEeCCCCCccHHHHHHHHHHHhCC
Confidence 78999999999999998653 344 899999865 5899999999887764
|
| >1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.89 E-value=4.6e-22 Score=183.83 Aligned_cols=205 Identities=14% Similarity=0.080 Sum_probs=147.4
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcch-----hhhhc-CCCceeeeccCCCHHHHHHHhcC--ccEEEEcC
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-----AMESF-GTYVESMAGDASNKKFLKTALRG--VRSIICPS 171 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~-----~~~~~-~~~v~~v~~D~~d~~~l~~~~~~--~d~vi~~~ 171 (306)
|+||||||+|+||++++++|+++|++|++++|.... ..... ..+++++.+|++|.+.+++++++ +|+|||++
T Consensus 2 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A 81 (347)
T 1orr_A 2 AKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKYMPDSCFHLA 81 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred cEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhccCCceEEEEcCCCCHHHHHHHHhccCCCEEEECC
Confidence 689999999999999999999999999999985321 11111 13588999999999999999998 99999984
Q ss_pred Cch----------------------hhhcccccCCC-EEEEecCcccccCCCCc---------------------ccc-c
Q 021854 172 EGF----------------------ISNAGSLKGVQ-HVILLSQLSVYRGSGGI---------------------QAL-M 206 (306)
Q Consensus 172 ~g~----------------------~~~~a~~~gvk-r~V~iSS~~~~~~~~~~---------------------~~~-~ 206 (306)
+.. +.+++.+.+++ +||++||.++|...... ... .
T Consensus 82 ~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~ 161 (347)
T 1orr_A 82 GQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLDF 161 (347)
T ss_dssp CCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCTTSCCCC
T ss_pred cccChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEeccHHHhCCCCcCCcccccccccccccccCccccCCCCC
Confidence 411 34556677886 99999999887532110 000 1
Q ss_pred chHHHHHHHHHHHHHHh----cCCCEEEEEcCcccCCCCC-----------------Cc-----ce-eeecCCCCccccC
Q 021854 207 KGNARKLAEQDESMLMA----SGIPYTIIRTGVLQNTPGG-----------------KQ-----GF-QFEEGCAANGSLS 259 (306)
Q Consensus 207 ~~~a~~~~~~aE~~l~~----sgi~~tiiRPg~l~~~~~~-----------------~~-----~~-~~~~g~~~~~~Is 259 (306)
...+...|..+|.+++. .++++++|||+++...... +. .+ .++.++....+++
T Consensus 162 ~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~ 241 (347)
T 1orr_A 162 HSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVRDVLH 241 (347)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCEEEESSSCCEEECEE
T ss_pred CCchHHHHHHHHHHHHHHHHHhCCcEEEEccCceeCcCCCCCCcCcHHHHHHHHHHhCcccCCCCeEEecCCcceEeeEE
Confidence 12233445566666654 4899999999996532210 00 12 1234445567899
Q ss_pred HHHHHHHHHHHhhC-CCCCCcEEEEecCC---cCHHHHHHHHHHHhhhc
Q 021854 260 KEDAAFICVEALES-IPQTGLIFEVVNGE---EKVSDWKKCFSRLMEKT 304 (306)
Q Consensus 260 ~~DVA~~iv~aL~~-~~~~g~~~~v~~g~---~s~~d~~~l~~~l~~~~ 304 (306)
++|+|++++.++++ +...|++|+++++. .++.|+.+++.++.+..
T Consensus 242 v~Dva~a~~~~~~~~~~~~g~~~~v~~~~~~~~s~~e~~~~i~~~~g~~ 290 (347)
T 1orr_A 242 AEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNID 290 (347)
T ss_dssp HHHHHHHHHHHHHTHHHHTTCEEEESSCGGGEEEHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHhccccCCCCEEEeCCCCCCCccHHHHHHHHHHHhCCC
Confidence 99999999999986 23467899999875 68999999998887643
|
| >2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=99.89 E-value=4.6e-22 Score=184.03 Aligned_cols=203 Identities=10% Similarity=0.088 Sum_probs=148.6
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcC--CCceeeeccCCCHHHHHHHhcC--ccEEEEcC
Q 021854 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG--TYVESMAGDASNKKFLKTALRG--VRSIICPS 171 (306)
Q Consensus 96 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~--~~v~~v~~D~~d~~~l~~~~~~--~d~vi~~~ 171 (306)
...+|+||||||+|+||++++++|+++|++|++++|+.....+... .+++++.+|++|.+++.+++++ +|+|||++
T Consensus 18 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~vih~A 97 (333)
T 2q1w_A 18 GSHMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREHLKDHPNLTFVEGSIADHALVNQLIGDLQPDAVVHTA 97 (333)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSCCCTTEEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred cCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhhHhhcCCceEEEEeCCCHHHHHHHHhccCCcEEEECc
Confidence 3457899999999999999999999999999999998654322222 4788999999999999999998 99999983
Q ss_pred Cc-------------------hhhhcccccCCCEEEEecCccccc----CCCCcc-c--ccc-hHHHHHHHHHHHHHHh-
Q 021854 172 EG-------------------FISNAGSLKGVQHVILLSQLSVYR----GSGGIQ-A--LMK-GNARKLAEQDESMLMA- 223 (306)
Q Consensus 172 ~g-------------------~~~~~a~~~gvkr~V~iSS~~~~~----~~~~~~-~--~~~-~~a~~~~~~aE~~l~~- 223 (306)
+. .+.+++.+.++++||++||.+++. ...... . ... ..+...|..+|.+++.
T Consensus 98 ~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~~~g~~~~~~~~~~~E~~~p~~~~Y~~sK~~~E~~~~~s 177 (333)
T 2q1w_A 98 ASYKDPDDWYNDTLTNCVGGSNVVQAAKKNNVGRFVYFQTALCYGVKPIQQPVRLDHPRNPANSSYAISKSANEDYLEYS 177 (333)
T ss_dssp CCCSCTTCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGCSCCCSSSBCTTSCCCCTTCHHHHHHHHHHHHHHHH
T ss_pred eecCCCccCChHHHHHHHHHHHHHHHHHHhCCCEEEEECcHHHhCCCcccCCCCcCCCCCCCCCchHHHHHHHHHHHHhh
Confidence 31 134556678899999999998875 321000 0 000 1233456678888877
Q ss_pred cCCCEEEEEcCcccCCCC-------------CCcceeeecCCCCccccCHHHHHHHHHHHhhCCCCCCcEEEEecCC-cC
Q 021854 224 SGIPYTIIRTGVLQNTPG-------------GKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVVNGE-EK 289 (306)
Q Consensus 224 sgi~~tiiRPg~l~~~~~-------------~~~~~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~~~g~~~~v~~g~-~s 289 (306)
.. ++++|||+.+..... .+. ..++ ++....+++++|+|++++.+++++. +++|+++++. .+
T Consensus 178 ~~-~~~ilR~~~v~gp~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~i~v~Dva~ai~~~~~~~~--g~~~~v~~~~~~s 252 (333)
T 2q1w_A 178 GL-DFVTFRLANVVGPRNVSGPLPIFFQRLSEGK-KCFV-TKARRDFVFVKDLARATVRAVDGVG--HGAYHFSSGTDVA 252 (333)
T ss_dssp TC-CEEEEEESEEESTTCCSSHHHHHHHHHHTTC-CCEE-EECEECEEEHHHHHHHHHHHHTTCC--CEEEECSCSCCEE
T ss_pred hC-CeEEEeeceEECcCCcCcHHHHHHHHHHcCC-eeeC-CCceEeeEEHHHHHHHHHHHHhcCC--CCEEEeCCCCCcc
Confidence 55 999999987543221 011 1222 3445678999999999999998765 8899999865 58
Q ss_pred HHHHHHHHHHHhhh
Q 021854 290 VSDWKKCFSRLMEK 303 (306)
Q Consensus 290 ~~d~~~l~~~l~~~ 303 (306)
+.|+.+++.++.+.
T Consensus 253 ~~e~~~~i~~~~g~ 266 (333)
T 2q1w_A 253 IKELYDAVVEAMAL 266 (333)
T ss_dssp HHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHhCC
Confidence 99999999887754
|
| >1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=1e-21 Score=181.36 Aligned_cols=203 Identities=16% Similarity=0.145 Sum_probs=146.2
Q ss_pred CeEEEEcCCChHHHHHHHHHHHC---C---CeEEEEecCcc-----hhhhhc-CCCceeeeccCCCHHHHHHHhcCccEE
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVK---R---TRIKALVKDKR-----NAMESF-GTYVESMAGDASNKKFLKTALRGVRSI 167 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~---g---~~V~~l~R~~~-----~~~~~~-~~~v~~v~~D~~d~~~l~~~~~~~d~v 167 (306)
|+||||||+|+||++++++|+++ | ++|++++|... ...... ..+++++.+|++|.+.+.+++.++|+|
T Consensus 1 M~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~V 80 (337)
T 1r6d_A 1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLARELRGVDAI 80 (337)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHHHHTTTCCEE
T ss_pred CeEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhhhhcccCCCeEEEEcCCCCHHHHHHHhcCCCEE
Confidence 57999999999999999999997 8 99999999652 121111 247889999999999999999999999
Q ss_pred EEcCCch----------------------hhhcccccCCCEEEEecCcccccCCCC--c---ccc-cchHHHHHHHHHHH
Q 021854 168 ICPSEGF----------------------ISNAGSLKGVQHVILLSQLSVYRGSGG--I---QAL-MKGNARKLAEQDES 219 (306)
Q Consensus 168 i~~~~g~----------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~--~---~~~-~~~~a~~~~~~aE~ 219 (306)
||+++.. +.+++.+.++++||++||.++|..... . ... ....+...|..+|.
T Consensus 81 ih~A~~~~~~~~~~~~~~~~~~Nv~~~~~l~~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~~e~ 160 (337)
T 1r6d_A 81 VHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVYGSIDSGSWTESSPLEPNSPYAASKAGSDL 160 (337)
T ss_dssp EECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGCCCSSSCBCTTSCCCCCSHHHHHHHHHHH
T ss_pred EECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEecchHHhCCCCCCCCCCCCCCCCCCchHHHHHHHHH
Confidence 9984311 345567788999999999888753210 0 000 01123334555555
Q ss_pred HHH----hcCCCEEEEEcCcccCCCC--------------CCccee-eecCCCCccccCHHHHHHHHHHHhhCCCCCCcE
Q 021854 220 MLM----ASGIPYTIIRTGVLQNTPG--------------GKQGFQ-FEEGCAANGSLSKEDAAFICVEALESIPQTGLI 280 (306)
Q Consensus 220 ~l~----~sgi~~tiiRPg~l~~~~~--------------~~~~~~-~~~g~~~~~~Is~~DVA~~iv~aL~~~~~~g~~ 280 (306)
+++ +.+++++++||+.+..... .+..+. ++.++....+++++|+|++++.+++.+. .+++
T Consensus 161 ~~~~~~~~~g~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~-~g~~ 239 (337)
T 1r6d_A 161 VARAYHRTYGLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALVLAGGR-AGEI 239 (337)
T ss_dssp HHHHHHHHHCCCEEEEEECEEECTTCCTTSHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHHCC-TTCE
T ss_pred HHHHHHHHHCCCEEEEEeeeeECCCCCCCChHHHHHHHHhcCCCcEEeCCCCeeEeeEeHHHHHHHHHHHHhCCC-CCCE
Confidence 554 4699999999998543221 111222 2344455688999999999999997653 5789
Q ss_pred EEEecCC-cCHHHHHHHHHHHhhh
Q 021854 281 FEVVNGE-EKVSDWKKCFSRLMEK 303 (306)
Q Consensus 281 ~~v~~g~-~s~~d~~~l~~~l~~~ 303 (306)
|+++++. .++.|+.+++.++.+.
T Consensus 240 ~~v~~~~~~s~~e~~~~i~~~~g~ 263 (337)
T 1r6d_A 240 YHIGGGLELTNRELTGILLDSLGA 263 (337)
T ss_dssp EEECCCCEEEHHHHHHHHHHHHTC
T ss_pred EEeCCCCCccHHHHHHHHHHHhCC
Confidence 9999876 5899999998887764
|
| >2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=4.1e-22 Score=182.16 Aligned_cols=201 Identities=18% Similarity=0.150 Sum_probs=143.9
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhc--CccEEEEcCCch---
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--GVRSIICPSEGF--- 174 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~--~~d~vi~~~~g~--- 174 (306)
|+||||||+|+||++++++|+++|++|+++.|...........+++++.+|++|.+++.++++ ++|+|||+++..
T Consensus 1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~~a~~~~~~ 80 (311)
T 2p5y_A 1 MRVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKRENVPKGVPFFRVDLRDKEGVERAFREFRPTHVSHQAAQASVK 80 (311)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCGGGSCTTCCEECCCTTCHHHHHHHHHHHCCSEEEECCSCCCHH
T ss_pred CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCchhhcccCeEEEECCCCCHHHHHHHHHhcCCCEEEECccccCch
Confidence 579999999999999999999999999999985543222333568899999999999999998 899999984310
Q ss_pred -------------------hhhcccccCCCEEEEecCc-ccccC-CC--Cc---ccc-cchHHHHHHHHHHHHHH----h
Q 021854 175 -------------------ISNAGSLKGVQHVILLSQL-SVYRG-SG--GI---QAL-MKGNARKLAEQDESMLM----A 223 (306)
Q Consensus 175 -------------------~~~~a~~~gvkr~V~iSS~-~~~~~-~~--~~---~~~-~~~~a~~~~~~aE~~l~----~ 223 (306)
+.+++.+.++++||++||. ++|.. .. +. ... ....+...|..+|.+++ +
T Consensus 81 ~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~~g~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~ 160 (311)
T 2p5y_A 81 VSVEDPVLDFEVNLLGGLNLLEACRQYGVEKLVFASTGGAIYGEVPEGERAEETWPPRPKSPYAASKAAFEHYLSVYGQS 160 (311)
T ss_dssp HHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEHHHHHCCCCTTCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCChhhcCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHHHHHH
Confidence 3455667889999999998 55532 11 10 000 01122334555566554 4
Q ss_pred cCCCEEEEEcCcccCCCCC-----------------Cccee-e-----ecCCCCccccCHHHHHHHHHHHhhCCCCCCcE
Q 021854 224 SGIPYTIIRTGVLQNTPGG-----------------KQGFQ-F-----EEGCAANGSLSKEDAAFICVEALESIPQTGLI 280 (306)
Q Consensus 224 sgi~~tiiRPg~l~~~~~~-----------------~~~~~-~-----~~g~~~~~~Is~~DVA~~iv~aL~~~~~~g~~ 280 (306)
.+++++++||+.+...... +..+. + +.+.....+++++|+|++++.+++++ +++
T Consensus 161 ~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~---~~~ 237 (311)
T 2p5y_A 161 YGLKWVSLRYGNVYGPRQDPHGEAGVVAIFAERVLKGLPVTLYARKTPGDEGCVRDYVYVGDVAEAHALALFSL---EGI 237 (311)
T ss_dssp HCCCEEEEEECEEECTTCCSSSTTHHHHHHHHHHHHTCCEEEECSSSTTSCCCEECEEEHHHHHHHHHHHHHHC---CEE
T ss_pred cCCCEEEEeeccccCcCCCCCCcCcHHHHHHHHHHcCCCcEEEecccCCCCCeEEeeEEHHHHHHHHHHHHhCC---CCE
Confidence 6899999999985432110 11111 2 23344467899999999999999865 789
Q ss_pred EEEecCC-cCHHHHHHHHHHHhhh
Q 021854 281 FEVVNGE-EKVSDWKKCFSRLMEK 303 (306)
Q Consensus 281 ~~v~~g~-~s~~d~~~l~~~l~~~ 303 (306)
|+++++. .++.|+.+++.++.+.
T Consensus 238 ~~i~~~~~~s~~e~~~~i~~~~g~ 261 (311)
T 2p5y_A 238 YNVGTGEGHTTREVLMAVAEAAGK 261 (311)
T ss_dssp EEESCSCCEEHHHHHHHHHHHHTC
T ss_pred EEeCCCCCccHHHHHHHHHHHhCC
Confidence 9999875 5899999999888764
|
| >1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=1e-21 Score=181.91 Aligned_cols=204 Identities=13% Similarity=0.077 Sum_probs=147.1
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHC--CCeEEEEecCcch-----hhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcC
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVK--RTRIKALVKDKRN-----AMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS 171 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~--g~~V~~l~R~~~~-----~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~ 171 (306)
+|+||||||+|+||++++++|+++ |++|++++|+... .......+++++.+|++|.+.+.++++++|+|||++
T Consensus 4 m~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A 83 (348)
T 1oc2_A 4 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKLAAKADAIVHYA 83 (348)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHHHHTTCSEEEECC
T ss_pred CcEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHhhhccCCeEEEECCCCCHHHHHHHhhcCCEEEECC
Confidence 479999999999999999999998 8999999997531 222223578999999999999999999999999984
Q ss_pred Cch----------------------hhhcccccCCCEEEEecCcccccCCCC--------------cc---cc-cchHHH
Q 021854 172 EGF----------------------ISNAGSLKGVQHVILLSQLSVYRGSGG--------------IQ---AL-MKGNAR 211 (306)
Q Consensus 172 ~g~----------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~--------------~~---~~-~~~~a~ 211 (306)
+.. +.+++.+.++ +||++||.++|..... .. .. ....+.
T Consensus 84 ~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~-~~v~~SS~~vyg~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~Y~ 162 (348)
T 1oc2_A 84 AESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDI-RFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPYS 162 (348)
T ss_dssp SCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTSCCCCCSHHH
T ss_pred cccCccchhhCHHHHHHHHHHHHHHHHHHHHHhCC-eEEEecccceeCCCcccccccccccccCCCcCCCCCCCCCCccH
Confidence 311 3355666787 9999999887743210 00 00 011233
Q ss_pred HHHHHHHHHHH----hcCCCEEEEEcCcccCCCCC--------------Ccce-eeecCCCCccccCHHHHHHHHHHHhh
Q 021854 212 KLAEQDESMLM----ASGIPYTIIRTGVLQNTPGG--------------KQGF-QFEEGCAANGSLSKEDAAFICVEALE 272 (306)
Q Consensus 212 ~~~~~aE~~l~----~sgi~~tiiRPg~l~~~~~~--------------~~~~-~~~~g~~~~~~Is~~DVA~~iv~aL~ 272 (306)
..|..+|.+++ +.+++++++||+.+...... +... .++.+.....+++++|+|++++.+++
T Consensus 163 ~sK~~~e~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~ 242 (348)
T 1oc2_A 163 STKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGVWAILT 242 (348)
T ss_dssp HHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCTTSHHHHHHHHHHHTCCCEEETTSCCEEECEEHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCCEEEEeeceeeCCCCCccchHHHHHHHHHcCCCceEecCCCceEeeEEHHHHHHHHHHHhh
Confidence 34555666554 35899999999986532211 1111 12344455789999999999999997
Q ss_pred CCCCCCcEEEEecCC-cCHHHHHHHHHHHhhhc
Q 021854 273 SIPQTGLIFEVVNGE-EKVSDWKKCFSRLMEKT 304 (306)
Q Consensus 273 ~~~~~g~~~~v~~g~-~s~~d~~~l~~~l~~~~ 304 (306)
.+ ..+++|+++++. .++.|+.+++.++.+..
T Consensus 243 ~~-~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~ 274 (348)
T 1oc2_A 243 KG-RMGETYLIGADGEKNNKEVLELILEKMGQP 274 (348)
T ss_dssp HC-CTTCEEEECCSCEEEHHHHHHHHHHHTTCC
T ss_pred CC-CCCCeEEeCCCCCCCHHHHHHHHHHHhCCC
Confidence 65 357899999876 58999999988877643
|
| >3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=99.89 E-value=1.1e-21 Score=183.25 Aligned_cols=203 Identities=14% Similarity=0.103 Sum_probs=150.4
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHH--CCCeEEEEecCcc-------------hhhhhcCCCceeeeccCCCHHHHHHH-
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIV--KRTRIKALVKDKR-------------NAMESFGTYVESMAGDASNKKFLKTA- 160 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~--~g~~V~~l~R~~~-------------~~~~~~~~~v~~v~~D~~d~~~l~~~- 160 (306)
.++|+||||||+|+||++++++|++ .|++|++++|+.+ ......+.+++++.+|++|.+.++++
T Consensus 8 ~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~ 87 (362)
T 3sxp_A 8 LENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDLRRLE 87 (362)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHHHHHT
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHHHHhh
Confidence 4578999999999999999999999 9999999999764 12222345789999999999999999
Q ss_pred hcCccEEEEcCCc--------------------hhhhcccccCCCEEEEecCcccccCCCCcc----c-ccchHHHHHHH
Q 021854 161 LRGVRSIICPSEG--------------------FISNAGSLKGVQHVILLSQLSVYRGSGGIQ----A-LMKGNARKLAE 215 (306)
Q Consensus 161 ~~~~d~vi~~~~g--------------------~~~~~a~~~gvkr~V~iSS~~~~~~~~~~~----~-~~~~~a~~~~~ 215 (306)
..++|+|||+++- .+.+++++.+++ ||++||.++|....... . ...+.+...|.
T Consensus 88 ~~~~D~vih~A~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~-~V~~SS~~vyg~~~~~~~E~~~~~p~~~Y~~sK~ 166 (362)
T 3sxp_A 88 KLHFDYLFHQAAVSDTTMLNQELVMKTNYQAFLNLLEIARSKKAK-VIYASSAGVYGNTKAPNVVGKNESPENVYGFSKL 166 (362)
T ss_dssp TSCCSEEEECCCCCGGGCCCHHHHHHHHTHHHHHHHHHHHHTTCE-EEEEEEGGGGCSCCSSBCTTSCCCCSSHHHHHHH
T ss_pred ccCCCEEEECCccCCccccCHHHHHHHHHHHHHHHHHHHHHcCCc-EEEeCcHHHhCCCCCCCCCCCCCCCCChhHHHHH
Confidence 8899999998441 144567778887 99999988876433211 0 00112344567
Q ss_pred HHHHHHHhcC--CCEEEEEcCcccCCCC------------------CCccee-eecCCCCccccCHHHHHHHHHHHhhCC
Q 021854 216 QDESMLMASG--IPYTIIRTGVLQNTPG------------------GKQGFQ-FEEGCAANGSLSKEDAAFICVEALESI 274 (306)
Q Consensus 216 ~aE~~l~~sg--i~~tiiRPg~l~~~~~------------------~~~~~~-~~~g~~~~~~Is~~DVA~~iv~aL~~~ 274 (306)
.+|.+++... +++++|||+.+..... .+..+. ++.+.....+++++|||++++.+++.+
T Consensus 167 ~~E~~~~~~~~~~~~~~lR~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~ai~~~~~~~ 246 (362)
T 3sxp_A 167 CMDEFVLSHSNDNVQVGLRYFNVYGPREFYKEKTASMVLQLALGAMAFKEVKLFEFGEQLRDFVYIEDVIQANVKAMKAQ 246 (362)
T ss_dssp HHHHHHHHTTTTSCEEEEEECSEESTTCGGGGGGSCHHHHHHHHHHTTSEEECSGGGCCEEECEEHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHhccCCEEEEEeCceeCcCCCCCCcchhHHHHHHHHHHhCCCeEEECCCCeEEccEEHHHHHHHHHHHHhcC
Confidence 7888887644 8999999988553221 111121 134455578999999999999999876
Q ss_pred CCCCcEEEEecCC-cCHHHHHHHHHHHhh
Q 021854 275 PQTGLIFEVVNGE-EKVSDWKKCFSRLME 302 (306)
Q Consensus 275 ~~~g~~~~v~~g~-~s~~d~~~l~~~l~~ 302 (306)
. .| +|+++++. .++.|+.+.+.+..+
T Consensus 247 ~-~g-~~~i~~~~~~s~~e~~~~i~~~~g 273 (362)
T 3sxp_A 247 K-SG-VYNVGYSQARSYNEIVSILKEHLG 273 (362)
T ss_dssp S-CE-EEEESCSCEEEHHHHHHHHHHHHC
T ss_pred C-CC-EEEeCCCCCccHHHHHHHHHHHcC
Confidence 4 45 99999866 589999999888765
|
| >1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=6.4e-22 Score=186.93 Aligned_cols=203 Identities=18% Similarity=0.180 Sum_probs=145.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhh-----------------------hhcCCCceeeeccCCCH
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM-----------------------ESFGTYVESMAGDASNK 154 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~-----------------------~~~~~~v~~v~~D~~d~ 154 (306)
.+++||||||+|+||++++++|+++|++|+++.|...... ...+.+++++.+|++|.
T Consensus 10 ~~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~Dl~d~ 89 (404)
T 1i24_A 10 HGSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDF 89 (404)
T ss_dssp --CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSH
T ss_pred CCCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhccCCceEEEECCCCCH
Confidence 5789999999999999999999999999999988643210 01245789999999999
Q ss_pred HHHHHHhcC--ccEEEEcCCch-------------------------hhhcccccCC-CEEEEecCcccccCCCCc----
Q 021854 155 KFLKTALRG--VRSIICPSEGF-------------------------ISNAGSLKGV-QHVILLSQLSVYRGSGGI---- 202 (306)
Q Consensus 155 ~~l~~~~~~--~d~vi~~~~g~-------------------------~~~~a~~~gv-kr~V~iSS~~~~~~~~~~---- 202 (306)
+.+.+++++ +|+|||+++.. +.+++.+.++ ++||++||.++|......
T Consensus 90 ~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~~~V~~SS~~vyg~~~~~~~E~ 169 (404)
T 1i24_A 90 EFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPNIDIEEG 169 (404)
T ss_dssp HHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGGCCCSSCBCSS
T ss_pred HHHHHHHhccCCCEEEECCCCCCccchhhCccchhhhHHHHHHHHHHHHHHHHHhCCCcEEEEeCcHHHhCCCCCCCCcc
Confidence 999999988 99999984310 2344566777 599999999887532110
Q ss_pred --------------cccc-chHHHHHHHHHHHHHH----hcCCCEEEEEcCcccCCCCC---------------------
Q 021854 203 --------------QALM-KGNARKLAEQDESMLM----ASGIPYTIIRTGVLQNTPGG--------------------- 242 (306)
Q Consensus 203 --------------~~~~-~~~a~~~~~~aE~~l~----~sgi~~tiiRPg~l~~~~~~--------------------- 242 (306)
.... ...+...|..+|.+++ +.++++++|||+.+......
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~ivrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~ 249 (404)
T 1i24_A 170 YITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVFGTA 249 (404)
T ss_dssp EEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCCSTTTCCH
T ss_pred ccccccccccccccCCCCCCChhHHHHHHHHHHHHHHHHhcCCeEEEEecceeeCCCCCccccccccccccccccchhhH
Confidence 0000 1123334555566544 34999999999985532110
Q ss_pred ----------Ccce-eeecCCCCccccCHHHHHHHHHHHhhCCCCCC--cEEEEecCCcCHHHHHHHHHHH
Q 021854 243 ----------KQGF-QFEEGCAANGSLSKEDAAFICVEALESIPQTG--LIFEVVNGEEKVSDWKKCFSRL 300 (306)
Q Consensus 243 ----------~~~~-~~~~g~~~~~~Is~~DVA~~iv~aL~~~~~~g--~~~~v~~g~~s~~d~~~l~~~l 300 (306)
+..+ .++.+.....+++++|+|++++.+++.+...+ ++|++++++.++.|+.+++.++
T Consensus 250 ~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~a~~~~l~~~~~~g~~~~yni~~~~~s~~e~~~~i~~~ 320 (404)
T 1i24_A 250 LNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFTEQFSVNELASLVTKA 320 (404)
T ss_dssp HHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCCCTTCEEEEEECSEEEEHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCeeEEeCCCCceECcEEHHHHHHHHHHHHhCcccCCCceEEEECCCCCcHHHHHHHHHHH
Confidence 1122 22344556789999999999999998876556 7999998556899999999887
|
| >2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A | Back alignment and structure |
|---|
Probab=99.89 E-value=2.2e-22 Score=184.13 Aligned_cols=197 Identities=12% Similarity=0.085 Sum_probs=131.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcC--ccEEEEcCCch-
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRG--VRSIICPSEGF- 174 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~--~d~vi~~~~g~- 174 (306)
|+|+||||||+|+||++++++|+++|++|++++|+.+. + + ++.+|++|.+.+.+++++ +|+|||+++..
T Consensus 1 m~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-----~-~--~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~~~ 72 (315)
T 2ydy_A 1 MNRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRAR-----P-K--FEQVNLLDSNAVHHIIHDFQPHVIVHCAAERR 72 (315)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC--------------------------CHHHHHHHCCSEEEECC----
T ss_pred CCCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCC-----C-C--eEEecCCCHHHHHHHHHhhCCCEEEECCcccC
Confidence 46899999999999999999999999999999987644 1 2 778999999999999985 89999984310
Q ss_pred ---------------------hhhcccccCCCEEEEecCcccccCCCCc-----ccccchHHHHHHHHHHHHHHhcCCCE
Q 021854 175 ---------------------ISNAGSLKGVQHVILLSQLSVYRGSGGI-----QALMKGNARKLAEQDESMLMASGIPY 228 (306)
Q Consensus 175 ---------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~-----~~~~~~~a~~~~~~aE~~l~~sgi~~ 228 (306)
+.+++.+.++ +||++||..++.+.... .......+...|..+|.+++..++++
T Consensus 73 ~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~ 151 (315)
T 2ydy_A 73 PDVVENQPDAASQLNVDASGNLAKEAAAVGA-FLIYISSDYVFDGTNPPYREEDIPAPLNLYGKTKLDGEKAVLENNLGA 151 (315)
T ss_dssp ---------------CHHHHHHHHHHHHHTC-EEEEEEEGGGSCSSSCSBCTTSCCCCCSHHHHHHHHHHHHHHHHCTTC
T ss_pred hhhhhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEchHHHcCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHhCCCe
Confidence 3455666776 99999999887641110 00001223445778899998888999
Q ss_pred EEEEcCcccCCCCC----------------CcceeeecCCCCccccCHHHHHHHHHHHhhCC---CCCCcEEEEecCC-c
Q 021854 229 TIIRTGVLQNTPGG----------------KQGFQFEEGCAANGSLSKEDAAFICVEALESI---PQTGLIFEVVNGE-E 288 (306)
Q Consensus 229 tiiRPg~l~~~~~~----------------~~~~~~~~g~~~~~~Is~~DVA~~iv~aL~~~---~~~g~~~~v~~g~-~ 288 (306)
++|||+.+...... +..+.. .++....+++++|+|++++.++.++ ...+++|+++++. .
T Consensus 152 ~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~i~~~~~~ 230 (315)
T 2ydy_A 152 AVLRIPILYGEVEKLEESAVTVMFDKVQFSNKSANM-DHWQQRFPTHVKDVATVCRQLAEKRMLDPSIKGTFHWSGNEQM 230 (315)
T ss_dssp EEEEECSEECSCSSGGGSTTGGGHHHHHCCSSCEEE-ECSSBBCCEEHHHHHHHHHHHHHHHHTCTTCCEEEECCCSCCB
T ss_pred EEEeeeeeeCCCCcccccHHHHHHHHHHhcCCCeee-ccCceECcEEHHHHHHHHHHHHHhhccccCCCCeEEEcCCCcc
Confidence 99999996522111 111212 3445578899999999999999764 3457899999865 5
Q ss_pred CHHHHHHHHHHHhhhc
Q 021854 289 KVSDWKKCFSRLMEKT 304 (306)
Q Consensus 289 s~~d~~~l~~~l~~~~ 304 (306)
++.|+.+++.++.+..
T Consensus 231 s~~e~~~~i~~~~g~~ 246 (315)
T 2ydy_A 231 TKYEMACAIADAFNLP 246 (315)
T ss_dssp CHHHHHHHHHHHTTCC
T ss_pred cHHHHHHHHHHHhCCC
Confidence 8999999998887653
|
| >1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.88 E-value=9.6e-22 Score=181.20 Aligned_cols=207 Identities=12% Similarity=-0.024 Sum_probs=147.3
Q ss_pred CccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchh-----hhh-cCCCceeeeccCCCHHHHHHHhcC--ccE
Q 021854 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-----MES-FGTYVESMAGDASNKKFLKTALRG--VRS 166 (306)
Q Consensus 95 ~~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~-----~~~-~~~~v~~v~~D~~d~~~l~~~~~~--~d~ 166 (306)
...++++||||||+|+||++++++|+++|++|++++|+.++. ... ...+++++.+|++|.+++.+++++ +|+
T Consensus 10 ~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 89 (335)
T 1rpn_A 10 HGSMTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKAQPQE 89 (335)
T ss_dssp -----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred ccccCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchhhccccCceEEEECCCCCHHHHHHHHHHcCCCE
Confidence 344689999999999999999999999999999999987541 111 124688999999999999999986 599
Q ss_pred EEEcCCch----------------------hhhcccccCC-CEEEEecCcccccCCCCc--c---ccc-chHHHHHHHHH
Q 021854 167 IICPSEGF----------------------ISNAGSLKGV-QHVILLSQLSVYRGSGGI--Q---ALM-KGNARKLAEQD 217 (306)
Q Consensus 167 vi~~~~g~----------------------~~~~a~~~gv-kr~V~iSS~~~~~~~~~~--~---~~~-~~~a~~~~~~a 217 (306)
|||+++.. +.+++.+.++ ++||++||.++|...... . ... ...+...|..+
T Consensus 90 Vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~v~g~~~~~~~~E~~~~~p~~~Y~~sK~~~ 169 (335)
T 1rpn_A 90 VYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQAERQDENTPFYPRSPYGVAKLYG 169 (335)
T ss_dssp EEECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHH
T ss_pred EEECccccchhhhhhChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCHHHhCCCCCCCCCcccCCCCCChhHHHHHHH
Confidence 99984310 3455666786 999999999887643210 0 000 11233345566
Q ss_pred HHHHHh----cCCCEEEEEcCcccCCC-C----------------CCc-c-eeeecCCCCccccCHHHHHHHHHHHhhCC
Q 021854 218 ESMLMA----SGIPYTIIRTGVLQNTP-G----------------GKQ-G-FQFEEGCAANGSLSKEDAAFICVEALESI 274 (306)
Q Consensus 218 E~~l~~----sgi~~tiiRPg~l~~~~-~----------------~~~-~-~~~~~g~~~~~~Is~~DVA~~iv~aL~~~ 274 (306)
|.+++. .+++++++||+.+.... . .+. . +.++.++....+++++|+|++++.+++++
T Consensus 170 e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~ 249 (335)
T 1rpn_A 170 HWITVNYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWLMLQQD 249 (335)
T ss_dssp HHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHHHHHHHHHSS
T ss_pred HHHHHHHHHHcCCcEEEEeeCcccCCCCCCCcchHHHHHHHHHHHcCCCceEEeCCCcceeceEEHHHHHHHHHHHHhcC
Confidence 666553 48999999998754221 1 011 1 22344556678999999999999999876
Q ss_pred CCCCcEEEEecCC-cCHHHHHHHHHHHhhh
Q 021854 275 PQTGLIFEVVNGE-EKVSDWKKCFSRLMEK 303 (306)
Q Consensus 275 ~~~g~~~~v~~g~-~s~~d~~~l~~~l~~~ 303 (306)
. +++|++++++ .++.|+.+++.++.+.
T Consensus 250 ~--~~~~ni~~~~~~s~~e~~~~i~~~~g~ 277 (335)
T 1rpn_A 250 K--ADDYVVATGVTTTVRDMCQIAFEHVGL 277 (335)
T ss_dssp S--CCCEEECCSCEEEHHHHHHHHHHTTTC
T ss_pred C--CCEEEEeCCCCccHHHHHHHHHHHhCC
Confidence 4 4789999876 5899999999887764
|
| >2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.88 E-value=1.9e-21 Score=179.25 Aligned_cols=204 Identities=17% Similarity=0.108 Sum_probs=143.7
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCC--CeEEEEecCcc--h---hhhhc-CCCceeeeccCCCHHHHHHHhcCccEEEEc
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKR--N---AMESF-GTYVESMAGDASNKKFLKTALRGVRSIICP 170 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g--~~V~~l~R~~~--~---~~~~~-~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~ 170 (306)
+|+||||||+|+||++++++|+++| ++|+++.|... . ..+.. ..+++++.+|++|.+.+.+++.++|+|||+
T Consensus 3 ~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~ 82 (336)
T 2hun_A 3 SMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANLKDLEDDPRYTFVKGDVADYELVKELVRKVDGVVHL 82 (336)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHTCSEEEEC
T ss_pred CCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHHhhhccCCceEEEEcCCCCHHHHHHHhhCCCEEEEC
Confidence 4789999999999999999999986 89999998652 1 11111 247889999999999999999999999998
Q ss_pred CCch----------------------hhhcccccCC-CEEEEecCcccccCCCC--c---ccc-cchHHHHHHHHHHHHH
Q 021854 171 SEGF----------------------ISNAGSLKGV-QHVILLSQLSVYRGSGG--I---QAL-MKGNARKLAEQDESML 221 (306)
Q Consensus 171 ~~g~----------------------~~~~a~~~gv-kr~V~iSS~~~~~~~~~--~---~~~-~~~~a~~~~~~aE~~l 221 (306)
++.. +.+++...++ ++||++||.++|..... . ... ....+...|..+|.++
T Consensus 83 A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~ 162 (336)
T 2hun_A 83 AAESHVDRSISSPEIFLHSNVIGTYTLLESIRRENPEVRFVHVSTDEVYGDILKGSFTENDRLMPSSPYSATKAASDMLV 162 (336)
T ss_dssp CCCCCHHHHHHCTHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEEGGGGCCCSSSCBCTTBCCCCCSHHHHHHHHHHHHH
T ss_pred CCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEeccHHHHCCCCCCCcCCCCCCCCCCccHHHHHHHHHHH
Confidence 4411 3344555564 79999999887753210 0 000 0112333455566655
Q ss_pred H----hcCCCEEEEEcCcccCCCCC--------------Cccee-eecCCCCccccCHHHHHHHHHHHhhCCCCCCcEEE
Q 021854 222 M----ASGIPYTIIRTGVLQNTPGG--------------KQGFQ-FEEGCAANGSLSKEDAAFICVEALESIPQTGLIFE 282 (306)
Q Consensus 222 ~----~sgi~~tiiRPg~l~~~~~~--------------~~~~~-~~~g~~~~~~Is~~DVA~~iv~aL~~~~~~g~~~~ 282 (306)
+ +.+++++++||+.+...... +..+. ++.+.....+++++|+|++++.+++++. .+++|+
T Consensus 163 ~~~~~~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~-~g~~~~ 241 (336)
T 2hun_A 163 LGWTRTYNLNASITRCTNNYGPYQFPEKLIPKTIIRASLGLKIPIYGTGKNVRDWLYVEDHVRAIELVLLKGE-SREIYN 241 (336)
T ss_dssp HHHHHHTTCEEEEEEECEEESTTCCTTSHHHHHHHHHHTTCCEEEETC---CEEEEEHHHHHHHHHHHHHHCC-TTCEEE
T ss_pred HHHHHHhCCCEEEEeeeeeeCcCCCcCchHHHHHHHHHcCCCceEeCCCCceeeeEEHHHHHHHHHHHHhCCC-CCCEEE
Confidence 4 36899999999985432211 11122 2334455688999999999999997653 578999
Q ss_pred EecCC-cCHHHHHHHHHHHhhh
Q 021854 283 VVNGE-EKVSDWKKCFSRLMEK 303 (306)
Q Consensus 283 v~~g~-~s~~d~~~l~~~l~~~ 303 (306)
++++. .++.|+.+++.++.+.
T Consensus 242 v~~~~~~s~~e~~~~i~~~~g~ 263 (336)
T 2hun_A 242 ISAGEEKTNLEVVKIILRLMGK 263 (336)
T ss_dssp ECCSCEECHHHHHHHHHHHTTC
T ss_pred eCCCCcccHHHHHHHHHHHhCC
Confidence 99876 5899999999887765
|
| >1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=7.9e-22 Score=180.71 Aligned_cols=192 Identities=11% Similarity=0.119 Sum_probs=142.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhc--CccEEEEcCCc--
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--GVRSIICPSEG-- 173 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~--~~d~vi~~~~g-- 173 (306)
++|+||||||+|+||++++++|+++|++|+++.|+. .+|+.|.+++.++++ ++|+|||+++.
T Consensus 2 ~~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~--------------~~D~~d~~~~~~~~~~~~~d~vih~a~~~~ 67 (321)
T 1e6u_A 2 AKQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD--------------ELNLLDSRAVHDFFASERIDQVYLAAAKVG 67 (321)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT--------------TCCTTCHHHHHHHHHHHCCSEEEECCCCCC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCc--------------cCCccCHHHHHHHHHhcCCCEEEEcCeecC
Confidence 357999999999999999999999999999987763 279999999999999 99999998331
Q ss_pred ---------------------hhhhcccccCCCEEEEecCcccccCCCC--cc-------cccc--hHHHHHHHHHHHHH
Q 021854 174 ---------------------FISNAGSLKGVQHVILLSQLSVYRGSGG--IQ-------ALMK--GNARKLAEQDESML 221 (306)
Q Consensus 174 ---------------------~~~~~a~~~gvkr~V~iSS~~~~~~~~~--~~-------~~~~--~~a~~~~~~aE~~l 221 (306)
.+.+++.+.++++||++||..+|..... .. ...+ ..+...|..+|.++
T Consensus 68 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~ 147 (321)
T 1e6u_A 68 GIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIAKIAGIKLC 147 (321)
T ss_dssp CHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGSCTTCCSSBCGGGTTSSCCCGGGHHHHHHHHHHHHHH
T ss_pred CcchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccHHHcCCCCCCCcCccccccCCCCCCCCccHHHHHHHHHHH
Confidence 0345667789999999999988753211 00 0111 12334456667766
Q ss_pred Hh----cCCCEEEEEcCcccCCCCC----------------------C-ccee-eecCCCCccccCHHHHHHHHHHHhhC
Q 021854 222 MA----SGIPYTIIRTGVLQNTPGG----------------------K-QGFQ-FEEGCAANGSLSKEDAAFICVEALES 273 (306)
Q Consensus 222 ~~----sgi~~tiiRPg~l~~~~~~----------------------~-~~~~-~~~g~~~~~~Is~~DVA~~iv~aL~~ 273 (306)
+. .+++++++||+++...... + ..+. ++.++....+++++|+|++++.++++
T Consensus 148 ~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~i~v~Dva~~~~~~~~~ 227 (321)
T 1e6u_A 148 ESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAAASIHVMEL 227 (321)
T ss_dssp HHHHHHHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEEHHHHHHHHHHHHHS
T ss_pred HHHHHHhCCCEEEEEeCCcCCcCCCCCCCCCccHHHHHHHHHHhhhcCCCceEEcCCCCEEEEeEEHHHHHHHHHHHHhC
Confidence 54 5999999999996532211 0 1222 23455567899999999999999987
Q ss_pred CCC--------CCcEEEEecCC-cCHHHHHHHHHHHhhh
Q 021854 274 IPQ--------TGLIFEVVNGE-EKVSDWKKCFSRLMEK 303 (306)
Q Consensus 274 ~~~--------~g~~~~v~~g~-~s~~d~~~l~~~l~~~ 303 (306)
+.. .+++|++++++ .++.|+.+++.++.+.
T Consensus 228 ~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~ 266 (321)
T 1e6u_A 228 AHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGY 266 (321)
T ss_dssp CHHHHHHTSBTTBCCEEESCSCCEEHHHHHHHHHHHHTC
T ss_pred cccccccccccCCceEEeCCCCCccHHHHHHHHHHHhCC
Confidence 654 25799998865 5899999999888764
|
| >4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.88 E-value=4.8e-22 Score=180.54 Aligned_cols=197 Identities=10% Similarity=0.074 Sum_probs=142.0
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcC--ccEEEEcCCc-
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRG--VRSIICPSEG- 173 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~--~d~vi~~~~g- 173 (306)
.++|+||||||||+||++++++|+++|+ +.... ...++++.+|++|.+.+.+++++ +|+|||+++.
T Consensus 4 ~~~~~vlVtGatG~iG~~l~~~L~~~g~------~~~~~-----~~~~~~~~~D~~d~~~~~~~~~~~~~d~Vih~A~~~ 72 (319)
T 4b8w_A 4 FQSMRILVTGGSGLVGKAIQKVVADGAG------LPGED-----WVFVSSKDADLTDTAQTRALFEKVQPTHVIHLAAMV 72 (319)
T ss_dssp CCCCEEEEETCSSHHHHHHHHHHHTTTC------CTTCE-----EEECCTTTCCTTSHHHHHHHHHHSCCSEEEECCCCC
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHhcCC------ccccc-----ccccCceecccCCHHHHHHHHhhcCCCEEEECceec
Confidence 3578999999999999999999999998 21111 12456678999999999999987 8999998331
Q ss_pred ----------------------hhhhcccccCCCEEEEecCcccccCCCCcc---------cccc-h-HHHHHHHHHHHH
Q 021854 174 ----------------------FISNAGSLKGVQHVILLSQLSVYRGSGGIQ---------ALMK-G-NARKLAEQDESM 220 (306)
Q Consensus 174 ----------------------~~~~~a~~~gvkr~V~iSS~~~~~~~~~~~---------~~~~-~-~a~~~~~~aE~~ 220 (306)
.+.+++++.+++||||+||.++|....... ...+ . .+...|..+|.+
T Consensus 73 ~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~ 152 (319)
T 4b8w_A 73 GGLFRNIKYNLDFWRKNVHMNDNVLHSAFEVGARKVVSCLSTCIFPDKTTYPIDETMIHNGPPHNSNFGYSYAKRMIDVQ 152 (319)
T ss_dssp CCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGGGSCSSCCSSBCGGGGGBSCCCSSSHHHHHHHHHHHHH
T ss_pred ccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEEcchhhcCCCCCCCccccccccCCCCCCcchHHHHHHHHHHH
Confidence 045667788999999999998875422100 0000 0 133345566666
Q ss_pred HH----hcCCCEEEEEcCcccCCCCC----------------------Cccee-eecCCCCccccCHHHHHHHHHHHhhC
Q 021854 221 LM----ASGIPYTIIRTGVLQNTPGG----------------------KQGFQ-FEEGCAANGSLSKEDAAFICVEALES 273 (306)
Q Consensus 221 l~----~sgi~~tiiRPg~l~~~~~~----------------------~~~~~-~~~g~~~~~~Is~~DVA~~iv~aL~~ 273 (306)
++ +.+++++++||+.+...... +..+. ++.++....+++++|+|++++.++.+
T Consensus 153 ~~~~~~~~~~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~ 232 (319)
T 4b8w_A 153 NRAYFQQYGCTFTAVIPTNVFGPHDNFNIEDGHVLPGLIHKVHLAKSSGSALTVWGTGNPRRQFIYSLDLAQLFIWVLRE 232 (319)
T ss_dssp HHHHHHHHCCEEEEEEECEEECTTCCCCTTTSCHHHHHHHHHHHHHHHTCCEEEESCSCCEECEEEHHHHHHHHHHHHHH
T ss_pred HHHHHHhhCCCEEEEeeccccCCCCCCCCccccccHHHHHHHHHHhccCCceEEeCCCCeeEEEEeHHHHHHHHHHHHhc
Confidence 54 47999999999986532211 11222 23455567889999999999999987
Q ss_pred CC-CCCcEEEEecCC-cCHHHHHHHHHHHhhhc
Q 021854 274 IP-QTGLIFEVVNGE-EKVSDWKKCFSRLMEKT 304 (306)
Q Consensus 274 ~~-~~g~~~~v~~g~-~s~~d~~~l~~~l~~~~ 304 (306)
+. ..+++|+++++. .++.|+.+++.+..+..
T Consensus 233 ~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~ 265 (319)
T 4b8w_A 233 YNEVEPIILSVGEEDEVSIKEAAEAVVEAMDFH 265 (319)
T ss_dssp CCCSSCEEECCCGGGCEEHHHHHHHHHHHTTCC
T ss_pred cccCCceEEEecCCCceeHHHHHHHHHHHhCCC
Confidence 54 457899999755 58999999999887654
|
| >3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.88 E-value=1e-21 Score=177.30 Aligned_cols=186 Identities=15% Similarity=0.110 Sum_probs=143.4
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhc--CccEEEEcCCc---
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--GVRSIICPSEG--- 173 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~--~~d~vi~~~~g--- 173 (306)
.|+||||||+|+||++++++|+++|++|++++|. .+|+.|.+.+.++++ ++|+|||+++.
T Consensus 5 ~m~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~---------------~~D~~d~~~~~~~~~~~~~d~vi~~a~~~~~ 69 (287)
T 3sc6_A 5 KERVIITGANGQLGKQLQEELNPEEYDIYPFDKK---------------LLDITNISQVQQVVQEIRPHIIIHCAAYTKV 69 (287)
T ss_dssp CEEEEEESTTSHHHHHHHHHSCTTTEEEEEECTT---------------TSCTTCHHHHHHHHHHHCCSEEEECCCCCCH
T ss_pred eeEEEEECCCCHHHHHHHHHHHhCCCEEEEeccc---------------ccCCCCHHHHHHHHHhcCCCEEEECCcccCh
Confidence 3599999999999999999999999999999992 389999999999998 69999998431
Q ss_pred -------------------hhhhcccccCCCEEEEecCcccccCCCCcc------cccchHHHHHHHHHHHHHHhcCCCE
Q 021854 174 -------------------FISNAGSLKGVQHVILLSQLSVYRGSGGIQ------ALMKGNARKLAEQDESMLMASGIPY 228 (306)
Q Consensus 174 -------------------~~~~~a~~~gvkr~V~iSS~~~~~~~~~~~------~~~~~~a~~~~~~aE~~l~~sgi~~ 228 (306)
.+.+++.+.++ ||||+||..+|....... ......+...|..+|.+++....++
T Consensus 70 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~ 148 (287)
T 3sc6_A 70 DQAEKERDLAYVINAIGARNVAVASQLVGA-KLVYISTDYVFQGDRPEGYDEFHNPAPINIYGASKYAGEQFVKELHNKY 148 (287)
T ss_dssp HHHTTCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGSCCCCSSCBCTTSCCCCCSHHHHHHHHHHHHHHHHCSSE
T ss_pred HHHhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEchhhhcCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCCc
Confidence 14456777788 799999998885432100 0011234455778899999888899
Q ss_pred EEEEcCcccCCCC------------CCcceeeecCCCCccccCHHHHHHHHHHHhhCCCCCCcEEEEecCC-cCHHHHHH
Q 021854 229 TIIRTGVLQNTPG------------GKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVVNGE-EKVSDWKK 295 (306)
Q Consensus 229 tiiRPg~l~~~~~------------~~~~~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~~~g~~~~v~~g~-~s~~d~~~ 295 (306)
+++||+.+..... .+..+.+ .++....+++++|+|++++.++.++. +++|++++++ .++.|+.+
T Consensus 149 ~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~v~Dva~~~~~~~~~~~--~~~~~i~~~~~~s~~e~~~ 225 (287)
T 3sc6_A 149 FIVRTSWLYGKYGNNFVKTMIRLGKEREEISV-VADQIGSPTYVADLNVMINKLIHTSL--YGTYHVSNTGSCSWFEFAK 225 (287)
T ss_dssp EEEEECSEECSSSCCHHHHHHHHHTTCSEEEE-ECSCEECCEEHHHHHHHHHHHHTSCC--CEEEECCCBSCEEHHHHHH
T ss_pred EEEeeeeecCCCCCcHHHHHHHHHHcCCCeEe-ecCcccCceEHHHHHHHHHHHHhCCC--CCeEEEcCCCcccHHHHHH
Confidence 9999999653211 1222222 35566789999999999999998876 6799999876 68999999
Q ss_pred HHHHHhhh
Q 021854 296 CFSRLMEK 303 (306)
Q Consensus 296 l~~~l~~~ 303 (306)
.+.++.+.
T Consensus 226 ~i~~~~g~ 233 (287)
T 3sc6_A 226 KIFSYANM 233 (287)
T ss_dssp HHHHHHTC
T ss_pred HHHHHcCC
Confidence 99988764
|
| >1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=2.4e-21 Score=182.70 Aligned_cols=205 Identities=16% Similarity=0.145 Sum_probs=144.6
Q ss_pred CCeEEEEcCCChHHHHHHHHHH-HCCCeEEEEecCcchh--------hhhc------------CCC---ceeeeccCCCH
Q 021854 99 RDAVLVTDGDSDIGQMVILSLI-VKRTRIKALVKDKRNA--------MESF------------GTY---VESMAGDASNK 154 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~-~~g~~V~~l~R~~~~~--------~~~~------------~~~---v~~v~~D~~d~ 154 (306)
+|+||||||+|+||++++++|+ ++|++|+++.|+.... .+.. ..+ ++++.+|++|.
T Consensus 2 ~m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~ 81 (397)
T 1gy8_A 2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE 81 (397)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCCH
Confidence 4699999999999999999999 9999999999976432 1111 124 88999999999
Q ss_pred HHHHHHhc--C-ccEEEEcCCch----------------------hhhcccccCCCEEEEecCcccccCCCC--------
Q 021854 155 KFLKTALR--G-VRSIICPSEGF----------------------ISNAGSLKGVQHVILLSQLSVYRGSGG-------- 201 (306)
Q Consensus 155 ~~l~~~~~--~-~d~vi~~~~g~----------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~-------- 201 (306)
+.+.++++ + +|+|||+++.. +.+++.+.++++||++||.+++.....
T Consensus 82 ~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~~ 161 (397)
T 1gy8_A 82 DFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVSTNAE 161 (397)
T ss_dssp HHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGTBSCCC-----CCC
T ss_pred HHHHHHHHhcCCCCEEEECCCccCcCcchhhHHHHHHHHhHHHHHHHHHHHHhCCCEEEEECCHHHhCCCCccccccccc
Confidence 99999998 6 99999984310 345567789999999999888754320
Q ss_pred -cc---ccc-chHHHHHHHHHHHHHHh----cCCCEEEEEcCcccCCCC---------------------------CCc-
Q 021854 202 -IQ---ALM-KGNARKLAEQDESMLMA----SGIPYTIIRTGVLQNTPG---------------------------GKQ- 244 (306)
Q Consensus 202 -~~---~~~-~~~a~~~~~~aE~~l~~----sgi~~tiiRPg~l~~~~~---------------------------~~~- 244 (306)
.. ... ...+...|..+|.+++. .+++++++||+++..... .+.
T Consensus 162 ~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (397)
T 1gy8_A 162 PIDINAKKSPESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDIAPDQR 241 (397)
T ss_dssp CBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHHHHHHSCC--
T ss_pred CcCccCCCCCCCchHHHHHHHHHHHHHHHHHHCCcEEEEeccceeCCCccccccccccchhHHHHHHHHHHHHHHHhcCc
Confidence 00 000 11233345556666543 499999999998542210 000
Q ss_pred -----------ceee-e------cCCCCccccCHHHHHHHHHHHhhCCCCC-----C---cEEEEecCC-cCHHHHHHHH
Q 021854 245 -----------GFQF-E------EGCAANGSLSKEDAAFICVEALESIPQT-----G---LIFEVVNGE-EKVSDWKKCF 297 (306)
Q Consensus 245 -----------~~~~-~------~g~~~~~~Is~~DVA~~iv~aL~~~~~~-----g---~~~~v~~g~-~s~~d~~~l~ 297 (306)
.+.+ + .++....+|+++|+|++++.+++.+... + ++|++++++ .++.|+.+++
T Consensus 242 ~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~v~Dva~a~~~~l~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i 321 (397)
T 1gy8_A 242 LTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNLGTSRGYSVREVIEVA 321 (397)
T ss_dssp ---------CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEESCSCCEEHHHHHHHH
T ss_pred cccccccccCCCceeecCcccCCCCCeeEeeEeHHHHHHHHHHHHhcccccccccccCCCcEEEeCCCCcccHHHHHHHH
Confidence 1111 1 2334467899999999999999764332 3 799998765 5899999999
Q ss_pred HHHhhh
Q 021854 298 SRLMEK 303 (306)
Q Consensus 298 ~~l~~~ 303 (306)
.++.+.
T Consensus 322 ~~~~g~ 327 (397)
T 1gy8_A 322 RKTTGH 327 (397)
T ss_dssp HHHHCC
T ss_pred HHHhCC
Confidence 887654
|
| >4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.87 E-value=6.1e-22 Score=189.45 Aligned_cols=199 Identities=16% Similarity=0.146 Sum_probs=142.2
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchh------------------hhhcCCCceeeeccCCCHHHHH
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA------------------MESFGTYVESMAGDASNKKFLK 158 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~------------------~~~~~~~v~~v~~D~~d~~~l~ 158 (306)
..+++||||||||+||++++++|++.|++|++++|+.++. ......+++++.+|+.|.+.+.
T Consensus 67 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~ 146 (427)
T 4f6c_A 67 RPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV 146 (427)
T ss_dssp CCCEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CCCC
T ss_pred CCCCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCcccCC
Confidence 3467999999999999999999999999999999998731 1112357999999999988888
Q ss_pred HHhcCccEEEEcCCc-------------------hhhhcccccCCCEEEEecCcccccCC-------------CCc-ccc
Q 021854 159 TALRGVRSIICPSEG-------------------FISNAGSLKGVQHVILLSQLSVYRGS-------------GGI-QAL 205 (306)
Q Consensus 159 ~~~~~~d~vi~~~~g-------------------~~~~~a~~~gvkr~V~iSS~~~~~~~-------------~~~-~~~ 205 (306)
.+.++|+|||+++. .+++++.+ ++++||++||.++ ... ... ...
T Consensus 147 -~~~~~d~Vih~A~~~~~~~~~~~~~~~Nv~g~~~l~~aa~~-~~~~~v~~SS~~~-G~~~~~~~~~~~~~E~~~~~~~~ 223 (427)
T 4f6c_A 147 -LPENMDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQ-HHARLIYVSTISV-GTYFDIDTEDVTFSEADVYKGQL 223 (427)
T ss_dssp -CSSCCSEEEECCCCC-------CHHHHHHHHHHHHHHHHHH-TTCEEEEEEEGGG-GSEECSSCSCCEECTTCSCSSCC
T ss_pred -CcCCCCEEEECCcccCCCCCHHHHHHHHHHHHHHHHHHHHh-cCCcEEEECchHh-CCCccCCCCCccccccccccCCC
Confidence 78899999998431 14455666 8899999999987 210 000 000
Q ss_pred cchHHHHHHHHHHHHHHh---cCCCEEEEEcCcccCCCCCCc-------------------ceeee--cCCCCccccCHH
Q 021854 206 MKGNARKLAEQDESMLMA---SGIPYTIIRTGVLQNTPGGKQ-------------------GFQFE--EGCAANGSLSKE 261 (306)
Q Consensus 206 ~~~~a~~~~~~aE~~l~~---sgi~~tiiRPg~l~~~~~~~~-------------------~~~~~--~g~~~~~~Is~~ 261 (306)
....+...|..+|.++++ .+++++++|||++........ ...++ .++....+++++
T Consensus 224 ~~~~Y~~sK~~~E~~~~~~~~~g~~~~ivRpg~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~ 303 (427)
T 4f6c_A 224 LTSPYTRSKFYSELKVLEAVNNGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIGVSMAEMPVDFSFVD 303 (427)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHTTCCEEEEEECCEESCSSSCCCCTTGGGCHHHHHHHHHHHSSEEEHHHHTCEECCEEHH
T ss_pred CCCchHHHHHHHHHHHHHHHHcCCCEEEEeCCeeecCCCCCccccCcchHHHHHHHHHHHhcCCCCCccccceEEEeeHH
Confidence 112233446667777765 799999999999654322111 00111 245567899999
Q ss_pred HHHHHHHHHhhCCCCCCcEEEEecCC-cCHHHHHHHHHH
Q 021854 262 DAAFICVEALESIPQTGLIFEVVNGE-EKVSDWKKCFSR 299 (306)
Q Consensus 262 DVA~~iv~aL~~~~~~g~~~~v~~g~-~s~~d~~~l~~~ 299 (306)
|+|++++.++..+. .+++|++++++ .++.++.+++.+
T Consensus 304 DvA~ai~~~~~~~~-~g~~~~l~~~~~~s~~el~~~i~~ 341 (427)
T 4f6c_A 304 TTARQIVALAQVNT-PQIIYHVLSPNKMPVKSLLECVKR 341 (427)
T ss_dssp HHHHHHHHHTTSCC-CCSEEEESCSCCEEHHHHHHHHHS
T ss_pred HHHHHHHHHHcCCC-CCCEEEecCCCCCcHHHHHHHHHH
Confidence 99999999998877 78999999866 478888887764
|
| >1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A | Back alignment and structure |
|---|
Probab=99.87 E-value=2.8e-21 Score=177.99 Aligned_cols=206 Identities=10% Similarity=0.015 Sum_probs=144.3
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh-------cCCCceee-eccCCCHHHHHHHhcCccEEE
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------FGTYVESM-AGDASNKKFLKTALRGVRSII 168 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~-------~~~~v~~v-~~D~~d~~~l~~~~~~~d~vi 168 (306)
.++++||||||+|+||++++++|+++|++|++++|+.++.... .+.+++++ .+|++|.+.+.++++++|+||
T Consensus 9 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi 88 (342)
T 1y1p_A 9 PEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAGVA 88 (342)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSEEE
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHcCCCEEE
Confidence 3578999999999999999999999999999999987653211 13568888 899999999999999999999
Q ss_pred EcCCch-------------------hhhccc-ccCCCEEEEecCcccccCCCC------cc-------------------
Q 021854 169 CPSEGF-------------------ISNAGS-LKGVQHVILLSQLSVYRGSGG------IQ------------------- 203 (306)
Q Consensus 169 ~~~~g~-------------------~~~~a~-~~gvkr~V~iSS~~~~~~~~~------~~------------------- 203 (306)
|+++.. +.+++. ..++++||++||..++..... ..
T Consensus 89 h~A~~~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~ 168 (342)
T 1y1p_A 89 HIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPESD 168 (342)
T ss_dssp ECCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHHHHHSCTTS
T ss_pred EeCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccHHHhcCCCCCCCCcccCccccCchhhhhhccccccc
Confidence 984310 334555 467899999999988632110 00
Q ss_pred cc-cchHHHHHHHHHHHHHHh------cCCCEEEEEcCcccCCCCCC-----------------ccee-eecCCCCcccc
Q 021854 204 AL-MKGNARKLAEQDESMLMA------SGIPYTIIRTGVLQNTPGGK-----------------QGFQ-FEEGCAANGSL 258 (306)
Q Consensus 204 ~~-~~~~a~~~~~~aE~~l~~------sgi~~tiiRPg~l~~~~~~~-----------------~~~~-~~~g~~~~~~I 258 (306)
.. ....+...|..+|.+++. .+++++++||+++....... .... ++.+ ....++
T Consensus 169 ~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v 247 (342)
T 1y1p_A 169 PQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPALALM-PPQYYV 247 (342)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTTCCCHHHHTC-CSEEEE
T ss_pred cccchHHHHHHHHHHHHHHHHHHHhcCCCceEEEEcCCceECCCCCCCCCCccHHHHHHHHHcCCCccccccC-CcCCEe
Confidence 00 011233345556666543 27889999999854322110 0010 1111 345789
Q ss_pred CHHHHHHHHHHHhhCCCCCCcEEEEecCCcCHHHHHHHHHHHhhh
Q 021854 259 SKEDAAFICVEALESIPQTGLIFEVVNGEEKVSDWKKCFSRLMEK 303 (306)
Q Consensus 259 s~~DVA~~iv~aL~~~~~~g~~~~v~~g~~s~~d~~~l~~~l~~~ 303 (306)
+++|+|++++.+++++...+..+...+++.++.|+.+++.++.+.
T Consensus 248 ~v~Dva~a~~~~~~~~~~~g~~~~~~g~~~s~~e~~~~i~~~~~~ 292 (342)
T 1y1p_A 248 SAVDIGLLHLGCLVLPQIERRRVYGTAGTFDWNTVLATFRKLYPS 292 (342)
T ss_dssp EHHHHHHHHHHHHHCTTCCSCEEEECCEEECHHHHHHHHHHHCTT
T ss_pred EHHHHHHHHHHHHcCcccCCceEEEeCCCCCHHHHHHHHHHHCCC
Confidence 999999999999987665566665555567899999999887654
|
| >1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=8.9e-21 Score=176.48 Aligned_cols=203 Identities=13% Similarity=0.094 Sum_probs=145.2
Q ss_pred CeEEEEcCCChHHHHHHHHHHHC-CCeEEEEecCcc--hhh---hhc-CCCceeeeccCCCHHHHHHHhc--CccEEEEc
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVK-RTRIKALVKDKR--NAM---ESF-GTYVESMAGDASNKKFLKTALR--GVRSIICP 170 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~-g~~V~~l~R~~~--~~~---~~~-~~~v~~v~~D~~d~~~l~~~~~--~~d~vi~~ 170 (306)
|+||||||+|+||++++++|++. |++|+++.|+.. ... +.. ..+++++.+|++|.+.+.++++ ++|+|||+
T Consensus 1 MkvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~ 80 (361)
T 1kew_A 1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQYQPDAVMHL 80 (361)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred CEEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhhhhhhcCCCeEEEECCCCCHHHHHHHHhhcCCCEEEEC
Confidence 47999999999999999999998 799999998752 111 111 2468899999999999999998 89999998
Q ss_pred CCch----------------------hhhccccc--CCC-------EEEEecCcccccCCCC------------cc---c
Q 021854 171 SEGF----------------------ISNAGSLK--GVQ-------HVILLSQLSVYRGSGG------------IQ---A 204 (306)
Q Consensus 171 ~~g~----------------------~~~~a~~~--gvk-------r~V~iSS~~~~~~~~~------------~~---~ 204 (306)
++.. +.+++.+. +++ +||++||.+++..... .. .
T Consensus 81 A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~~~~~~~~E~~~ 160 (361)
T 1kew_A 81 AAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTA 160 (361)
T ss_dssp CSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBCTTSC
T ss_pred CCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHHHhCCCcccccccccccCCCCCCCCC
Confidence 4311 33455666 887 9999999887653210 00 0
Q ss_pred c-cchHHHHHHHHHHHHHHh----cCCCEEEEEcCcccCCCCC--------------Cccee-eecCCCCccccCHHHHH
Q 021854 205 L-MKGNARKLAEQDESMLMA----SGIPYTIIRTGVLQNTPGG--------------KQGFQ-FEEGCAANGSLSKEDAA 264 (306)
Q Consensus 205 ~-~~~~a~~~~~~aE~~l~~----sgi~~tiiRPg~l~~~~~~--------------~~~~~-~~~g~~~~~~Is~~DVA 264 (306)
. ....+...|..+|.+++. .++++++|||+.+...... +..+. ++.+.....+++++|+|
T Consensus 161 ~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva 240 (361)
T 1kew_A 161 YAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDHA 240 (361)
T ss_dssp CCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTTSHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHH
T ss_pred CCCCCccHHHHHHHHHHHHHHHHHhCCcEEEEeeceeECCCCCcccHHHHHHHHHHcCCCceEcCCCceeEeeEEHHHHH
Confidence 0 011233345556666543 4899999999985432211 11122 23344556789999999
Q ss_pred HHHHHHhhCCCCCCcEEEEecCC-cCHHHHHHHHHHHhhh
Q 021854 265 FICVEALESIPQTGLIFEVVNGE-EKVSDWKKCFSRLMEK 303 (306)
Q Consensus 265 ~~iv~aL~~~~~~g~~~~v~~g~-~s~~d~~~l~~~l~~~ 303 (306)
++++.+++.+ ..+++|+++++. .++.++.+++.++.+.
T Consensus 241 ~a~~~~~~~~-~~g~~~~v~~~~~~s~~e~~~~i~~~~g~ 279 (361)
T 1kew_A 241 RALHMVVTEG-KAGETYNIGGHNEKKNLDVVFTICDLLDE 279 (361)
T ss_dssp HHHHHHHHHC-CTTCEEEECCCCEEEHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCC-CCCCEEEecCCCeeeHHHHHHHHHHHhCC
Confidence 9999999765 457899999876 5899999998887764
|
| >1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.87 E-value=2.9e-21 Score=174.82 Aligned_cols=190 Identities=15% Similarity=0.118 Sum_probs=142.1
Q ss_pred CccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhc--CccEEEEcCC
Q 021854 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--GVRSIICPSE 172 (306)
Q Consensus 95 ~~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~--~~d~vi~~~~ 172 (306)
.....++||||||||+||++++++|+++|++|++++|+ .+|+.|.+.+.++++ ++|+|||+++
T Consensus 8 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~---------------~~Dl~d~~~~~~~~~~~~~d~vih~A~ 72 (292)
T 1vl0_A 8 HHHHHMKILITGANGQLGREIQKQLKGKNVEVIPTDVQ---------------DLDITNVLAVNKFFNEKKPNVVINCAA 72 (292)
T ss_dssp ----CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTT---------------TCCTTCHHHHHHHHHHHCCSEEEECCC
T ss_pred cccccceEEEECCCChHHHHHHHHHHhCCCeEEeccCc---------------cCCCCCHHHHHHHHHhcCCCEEEECCc
Confidence 34457999999999999999999999999999999986 279999999999998 7999999843
Q ss_pred ch----------------------hhhcccccCCCEEEEecCcccccCCCC--cc----cccchHHHHHHHHHHHHHHhc
Q 021854 173 GF----------------------ISNAGSLKGVQHVILLSQLSVYRGSGG--IQ----ALMKGNARKLAEQDESMLMAS 224 (306)
Q Consensus 173 g~----------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~--~~----~~~~~~a~~~~~~aE~~l~~s 224 (306)
.. +.+++.+.++ +||++||.++|..... .. ......+...|..+|.+++..
T Consensus 73 ~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~-~iv~~SS~~v~~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~ 151 (292)
T 1vl0_A 73 HTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGA-EIVQISTDYVFDGEAKEPITEFDEVNPQSAYGKTKLEGENFVKAL 151 (292)
T ss_dssp CCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGSCSCCSSCBCTTSCCCCCSHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEechHHeECCCCCCCCCCCCCCCCccHHHHHHHHHHHHHHhh
Confidence 10 3455666787 9999999988764321 00 000122444577889999888
Q ss_pred CCCEEEEEcCcccCCCCC-----------CcceeeecCCCCccccCHHHHHHHHHHHhhCCCCCCcEEEEecCC-cCHHH
Q 021854 225 GIPYTIIRTGVLQNTPGG-----------KQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVVNGE-EKVSD 292 (306)
Q Consensus 225 gi~~tiiRPg~l~~~~~~-----------~~~~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~~~g~~~~v~~g~-~s~~d 292 (306)
..++++|||+.+...... +..+. ..++....+++++|+|++++.+++++ .+++|+++++. .++.|
T Consensus 152 ~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~v~Dva~~~~~~~~~~--~~~~~~i~~~~~~s~~e 228 (292)
T 1vl0_A 152 NPKYYIVRTAWLYGDGNNFVKTMINLGKTHDELK-VVHDQVGTPTSTVDLARVVLKVIDEK--NYGTFHCTCKGICSWYD 228 (292)
T ss_dssp CSSEEEEEECSEESSSSCHHHHHHHHHHHCSEEE-EESSCEECCEEHHHHHHHHHHHHHHT--CCEEEECCCBSCEEHHH
T ss_pred CCCeEEEeeeeeeCCCcChHHHHHHHHhcCCcEE-eecCeeeCCccHHHHHHHHHHHHhcC--CCcEEEecCCCCccHHH
Confidence 889999999996633110 11111 13445578899999999999999876 67899999865 58999
Q ss_pred HHHHHHHHhhh
Q 021854 293 WKKCFSRLMEK 303 (306)
Q Consensus 293 ~~~l~~~l~~~ 303 (306)
+.+++.++.+.
T Consensus 229 ~~~~i~~~~g~ 239 (292)
T 1vl0_A 229 FAVEIFRLTGI 239 (292)
T ss_dssp HHHHHHHHHCC
T ss_pred HHHHHHHHhCC
Confidence 99999888764
|
| >1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.87 E-value=1e-20 Score=177.47 Aligned_cols=204 Identities=13% Similarity=0.030 Sum_probs=144.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcch-----hhhh-------cCCCceeeeccCCCHHHHHHHhcC--
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-----AMES-------FGTYVESMAGDASNKKFLKTALRG-- 163 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~-----~~~~-------~~~~v~~v~~D~~d~~~l~~~~~~-- 163 (306)
|+++||||||+|+||++++++|+++|++|++++|+.+. .... ...+++++.+|++|.+++.+++++
T Consensus 23 M~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~ 102 (375)
T 1t2a_A 23 MRNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVK 102 (375)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHHC
T ss_pred cCcEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHHHhhhhccccCCCceEEEccCCCHHHHHHHHHhcC
Confidence 34799999999999999999999999999999998653 2221 124688999999999999999986
Q ss_pred ccEEEEcCCch----------------------hhhcccccCC---CEEEEecCcccccCCCC--c---ccc-cchHHHH
Q 021854 164 VRSIICPSEGF----------------------ISNAGSLKGV---QHVILLSQLSVYRGSGG--I---QAL-MKGNARK 212 (306)
Q Consensus 164 ~d~vi~~~~g~----------------------~~~~a~~~gv---kr~V~iSS~~~~~~~~~--~---~~~-~~~~a~~ 212 (306)
+|+|||+++.. +.+++.+.++ ++||++||.+++..... . ... ....+..
T Consensus 103 ~d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~E~~~~~~~~~Y~~ 182 (375)
T 1t2a_A 103 PTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGA 182 (375)
T ss_dssp CSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSSSSBCTTSCCCCCSHHHH
T ss_pred CCEEEECCCcccccccccCHHHHHHHHHHHHHHHHHHHHHhCCCccceEEEecchhhhCCCCCCCCCccCCCCCCChhHH
Confidence 59999984310 3455666777 89999999988763221 0 000 0112333
Q ss_pred HHHHHHHHHH----hcCCCEEEEEcCcccCC-CCC----------------C--cceeeecCCCCccccCHHHHHHHHHH
Q 021854 213 LAEQDESMLM----ASGIPYTIIRTGVLQNT-PGG----------------K--QGFQFEEGCAANGSLSKEDAAFICVE 269 (306)
Q Consensus 213 ~~~~aE~~l~----~sgi~~tiiRPg~l~~~-~~~----------------~--~~~~~~~g~~~~~~Is~~DVA~~iv~ 269 (306)
.|..+|.+++ +.+++++++||+.+... ... + ..+.++.++....+++++|+|++++.
T Consensus 183 sK~~~e~~~~~~~~~~~~~~~i~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~Dva~a~~~ 262 (375)
T 1t2a_A 183 AKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEAMWL 262 (375)
T ss_dssp HHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECCEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCEEEEecccccCCCCCCCcchHHHHHHHHHHHcCCCceeEeCCCCceeeeEEHHHHHHHHHH
Confidence 4555566554 35899999998764321 110 1 11223445566789999999999999
Q ss_pred HhhCCCCCCcEEEEecCC-cCHHHHHHHHHHHhhh
Q 021854 270 ALESIPQTGLIFEVVNGE-EKVSDWKKCFSRLMEK 303 (306)
Q Consensus 270 aL~~~~~~g~~~~v~~g~-~s~~d~~~l~~~l~~~ 303 (306)
+++.+. +.+|++++++ .++.|+.+++.++.+.
T Consensus 263 ~~~~~~--~~~~ni~~~~~~s~~e~~~~i~~~~g~ 295 (375)
T 1t2a_A 263 MLQNDE--PEDFVIATGEVHSVREFVEKSFLHIGK 295 (375)
T ss_dssp HHHSSS--CCCEEECCSCCEEHHHHHHHHHHHTTC
T ss_pred HHhcCC--CceEEEeCCCcccHHHHHHHHHHHhCC
Confidence 998764 3689999865 5899999999887754
|
| >3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=3.8e-21 Score=172.81 Aligned_cols=173 Identities=12% Similarity=0.061 Sum_probs=133.3
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcCCc-----
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG----- 173 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~g----- 173 (306)
+|+|+||||+|+||++++++|+++|++|+++.|+..+.. +.+++++.+|++|.+++.++++++|+|||+++.
T Consensus 3 ~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~---~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~Ag~~~~~~ 79 (267)
T 3rft_A 3 MKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA---GPNEECVQCDLADANAVNAMVAGCDGIVHLGGISVEKP 79 (267)
T ss_dssp EEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC---CTTEEEEECCTTCHHHHHHHHTTCSEEEECCSCCSCCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc---CCCCEEEEcCCCCHHHHHHHHcCCCEEEECCCCcCcCC
Confidence 578999999999999999999999999999999986643 457899999999999999999999999998431
Q ss_pred -------------hhhhcccccCCCEEEEecCcccccCC------------CCcccccchHHHHHHHHHHHHH----Hhc
Q 021854 174 -------------FISNAGSLKGVQHVILLSQLSVYRGS------------GGIQALMKGNARKLAEQDESML----MAS 224 (306)
Q Consensus 174 -------------~~~~~a~~~gvkr~V~iSS~~~~~~~------------~~~~~~~~~~a~~~~~~aE~~l----~~s 224 (306)
.+.+++.+.++++||++||..++... .+...| ...|..+|.++ ++.
T Consensus 80 ~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~g~~~~~~~~~e~~~~~~~~~Y-----~~sK~~~e~~~~~~a~~~ 154 (267)
T 3rft_A 80 FEQILQGNIIGLYNLYEAARAHGQPRIVFASSNHTIGYYPQTERLGPDVPARPDGLY-----GVSKCFGENLARMYFDKF 154 (267)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGTTSBTTSCBCTTSCCCCCSHH-----HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcchHHhCCCCCCCCCCCCCCCCCCChH-----HHHHHHHHHHHHHHHHHh
Confidence 14556777899999999999887421 111223 22344444444 357
Q ss_pred CCCEEEEEcCcccCCCCCCcceeeecCCCCccccCHHHHHHHHHHHhhCCCCCCcEEEEecCC
Q 021854 225 GIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVVNGE 287 (306)
Q Consensus 225 gi~~tiiRPg~l~~~~~~~~~~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~~~g~~~~v~~g~ 287 (306)
++++++|||+.+...... +.....+++++|+++.+..+++.+...+.++++.+++
T Consensus 155 g~~~~~vr~~~v~~~~~~--------~~~~~~~~~~~d~a~~~~~~~~~~~~~~~~~~~~s~~ 209 (267)
T 3rft_A 155 GQETALVRIGSCTPEPNN--------YRMLSTWFSHDDFVSLIEAVFRAPVLGCPVVWGASAN 209 (267)
T ss_dssp CCCEEEEEECBCSSSCCS--------TTHHHHBCCHHHHHHHHHHHHHCSCCCSCEEEECCCC
T ss_pred CCeEEEEEeecccCCCCC--------CCceeeEEcHHHHHHHHHHHHhCCCCCceEEEEeCCC
Confidence 999999999997754322 2223467999999999999998877666677776654
|
| >3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=2.2e-21 Score=177.49 Aligned_cols=197 Identities=16% Similarity=0.098 Sum_probs=141.9
Q ss_pred eEEEEcCCChHHHHHHHHHHHC--CCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhc--CccEEEEcCCch--
Q 021854 101 AVLVTDGDSDIGQMVILSLIVK--RTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--GVRSIICPSEGF-- 174 (306)
Q Consensus 101 ~ilVtGatG~iG~~l~~~L~~~--g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~--~~d~vi~~~~g~-- 174 (306)
+||||||+|+||++++++|+++ |++|++++|+..... +++++.+|+.|.+++.++++ ++|+|||+++..
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-----~~~~~~~D~~d~~~~~~~~~~~~~d~vih~a~~~~~ 75 (317)
T 3ajr_A 1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDTG-----GIKFITLDVSNRDEIDRAVEKYSIDAIFHLAGILSA 75 (317)
T ss_dssp CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCCT-----TCCEEECCTTCHHHHHHHHHHTTCCEEEECCCCCHH
T ss_pred CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCcccc-----CceEEEecCCCHHHHHHHHhhcCCcEEEECCcccCC
Confidence 5899999999999999999998 899999998765432 57889999999999999998 899999984411
Q ss_pred -------------------hhhcccccCCCEEEEecCcccccCCCC---cc---cc-cchHHHHHHHHHHHHH----Hhc
Q 021854 175 -------------------ISNAGSLKGVQHVILLSQLSVYRGSGG---IQ---AL-MKGNARKLAEQDESML----MAS 224 (306)
Q Consensus 175 -------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~---~~---~~-~~~~a~~~~~~aE~~l----~~s 224 (306)
+.+++.+.++++||++||..++..... .. .. ....+...|..+|.++ ++.
T Consensus 76 ~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~ 155 (317)
T 3ajr_A 76 KGEKDPALAYKVNMNGTYNILEAAKQHRVEKVVIPSTIGVFGPETPKNKVPSITITRPRTMFGVTKIAAELLGQYYYEKF 155 (317)
T ss_dssp HHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCTTSCSSSBCSSSCCCCCSHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccChHHHhhhhhHHHHHHHHHHHHcCCCEEEEecCHHHhCCCCCCCCccccccCCCCchHHHHHHHHHHHHHHHHHhc
Confidence 345567789999999999988764311 00 00 0112233344555544 346
Q ss_pred CCCEEEEEcCcccCC---CCC---------------Ccc-eeeecCCCCccccCHHHHHHHHHHHhhCCCC---CCcEEE
Q 021854 225 GIPYTIIRTGVLQNT---PGG---------------KQG-FQFEEGCAANGSLSKEDAAFICVEALESIPQ---TGLIFE 282 (306)
Q Consensus 225 gi~~tiiRPg~l~~~---~~~---------------~~~-~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~~---~g~~~~ 282 (306)
+++++++||+.+... +.. ... ..+..++....+++++|+|++++.+++++.. .+++|+
T Consensus 156 ~~~~~~lR~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~~~~~~g~~~~ 235 (317)
T 3ajr_A 156 GLDVRSLRYPGIISYKAEPTAGTTDYAVEIFYYAVKREKYKCYLAPNRALPMMYMPDALKALVDLYEADRDKLVLRNGYN 235 (317)
T ss_dssp CCEEEEEEECEEECSSSCCCSCSSTHHHHHHHHHHTTCCEEECSCTTCCEEEEEHHHHHHHHHHHHHCCGGGCSSCSCEE
T ss_pred CCeEEEEecCcEeccCCCCCCcchhHHHHHHHHHHhCCCceeecCccceeeeeEHHHHHHHHHHHHhCCccccccCceEe
Confidence 999999998775432 110 011 1122345557889999999999999987643 357999
Q ss_pred EecCCcCHHHHHHHHHHHhh
Q 021854 283 VVNGEEKVSDWKKCFSRLME 302 (306)
Q Consensus 283 v~~g~~s~~d~~~l~~~l~~ 302 (306)
+++++.++.++.+++.++.+
T Consensus 236 i~~~~~s~~e~~~~i~~~~~ 255 (317)
T 3ajr_A 236 VTAYTFTPSELYSKIKERIP 255 (317)
T ss_dssp CCSEEECHHHHHHHHHTTCC
T ss_pred cCCccccHHHHHHHHHHHCC
Confidence 99766788888888876654
|
| >4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.86 E-value=1.4e-20 Score=183.01 Aligned_cols=204 Identities=14% Similarity=0.135 Sum_probs=148.4
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHC---CCeEEEEecCcchhh------h---------------hcCCCceeeeccCC
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVK---RTRIKALVKDKRNAM------E---------------SFGTYVESMAGDAS 152 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~---g~~V~~l~R~~~~~~------~---------------~~~~~v~~v~~D~~ 152 (306)
..+|+||||||+|+||++++++|++. |++|++++|+.+... + ....+++++.+|++
T Consensus 71 ~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~ 150 (478)
T 4dqv_A 71 PELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARRRLEKTFDSGDPELLRHFKELAADRLEVVAGDKS 150 (478)
T ss_dssp SCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEECCTT
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHHHHHHHHHHHHhcchhhhhhhhhhccCceEEEEeECC
Confidence 35799999999999999999999999 899999999876421 1 12357999999998
Q ss_pred ------CHHHHHHHhcCccEEEEcCCc------------------hhhhcccccCCCEEEEecCcccccCCCCcc-----
Q 021854 153 ------NKKFLKTALRGVRSIICPSEG------------------FISNAGSLKGVQHVILLSQLSVYRGSGGIQ----- 203 (306)
Q Consensus 153 ------d~~~l~~~~~~~d~vi~~~~g------------------~~~~~a~~~gvkr~V~iSS~~~~~~~~~~~----- 203 (306)
|.+.+.++++++|+|||+++. .+.+++.+.++++|||+||.+++.......
T Consensus 151 ~~~~gld~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~~V~iSS~~v~~~~~~~~~~E~~ 230 (478)
T 4dqv_A 151 EPDLGLDQPMWRRLAETVDLIVDSAAMVNAFPYHELFGPNVAGTAELIRIALTTKLKPFTYVSTADVGAAIEPSAFTEDA 230 (478)
T ss_dssp SGGGGCCHHHHHHHHHHCCEEEECCSSCSBSSCCEEHHHHHHHHHHHHHHHTSSSCCCEEEEEEGGGGTTSCTTTCCSSS
T ss_pred CcccCCCHHHHHHHHcCCCEEEECccccCCcCHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeehhhcCccCCCCcCCcc
Confidence 778899999999999998431 145667788999999999988875422110
Q ss_pred ---ccc---------chHHHHHHHHHHHHHHh----cCCCEEEEEcCcccCCCC-CC----cce------------eeec
Q 021854 204 ---ALM---------KGNARKLAEQDESMLMA----SGIPYTIIRTGVLQNTPG-GK----QGF------------QFEE 250 (306)
Q Consensus 204 ---~~~---------~~~a~~~~~~aE~~l~~----sgi~~tiiRPg~l~~~~~-~~----~~~------------~~~~ 250 (306)
+.. ...+...|..+|.++++ .+++++++|||++..... .+ ... .++.
T Consensus 231 ~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ivRpg~v~G~~~~~g~~~~~~~~~~l~~~~~~~g~~P~ 310 (478)
T 4dqv_A 231 DIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLCALPVAVFRCGMILADTSYAGQLNMSDWVTRMVLSLMATGIAPR 310 (478)
T ss_dssp CHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECCSSSSSCCCTTBHHHHHHHHHHHHCEEES
T ss_pred cccccCcccccccccccchHHHHHHHHHHHHHHHHHhCCCeEEEECceeeCCCccCCcCCHHHHHHHHHHHHHHcCcccc
Confidence 000 01134456677777764 599999999999653211 00 000 0000
Q ss_pred -----------CCCCccccCHHHHHHHHHHHhhC----CCCCCcEEEEecCC---cCHHHHHHHHHHH
Q 021854 251 -----------GCAANGSLSKEDAAFICVEALES----IPQTGLIFEVVNGE---EKVSDWKKCFSRL 300 (306)
Q Consensus 251 -----------g~~~~~~Is~~DVA~~iv~aL~~----~~~~g~~~~v~~g~---~s~~d~~~l~~~l 300 (306)
++....+++++|+|++++.++.+ +...+++||+++++ .++.++.+++.++
T Consensus 311 ~~~~~~~~G~~~~~~~~~v~vdDvA~ai~~~~~~~~~~~~~~~~~ynv~~~~~~~~s~~el~~~l~~~ 378 (478)
T 4dqv_A 311 SFYEPDSEGNRQRAHFDGLPVTFVAEAIAVLGARVAGSSLAGFATYHVMNPHDDGIGLDEYVDWLIEA 378 (478)
T ss_dssp CSBCCCTTSCCCCCCCCEEEHHHHHHHHHHHHHTTC-CCCCSEEEEEESCCCCSSCSHHHHHHHHHHT
T ss_pred cccccccccccccceeeeeeHHHHHHHHHHHHhhcccCCCCCCceEEecCCCCCCcCHHHHHHHHHHc
Confidence 13446789999999999999986 55667899999965 5788988888875
|
| >2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=4.3e-21 Score=178.81 Aligned_cols=201 Identities=15% Similarity=0.061 Sum_probs=143.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCC-CeEEEEecCcchh-hhhcCCCceeeeccCCCHHHHHHHhc-----CccEEEEc
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNA-MESFGTYVESMAGDASNKKFLKTALR-----GVRSIICP 170 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~l~R~~~~~-~~~~~~~v~~v~~D~~d~~~l~~~~~-----~~d~vi~~ 170 (306)
.+|+||||||+|+||++++++|+++| ++|+++.|+.... ..... ++. +.+|+.|.+.++.+++ ++|+|||+
T Consensus 45 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~-~~~-~~~d~~~~~~~~~~~~~~~~~~~d~Vih~ 122 (357)
T 2x6t_A 45 EGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLV-DLN-IADYMDKEDFLIQIMAGEEFGDVEAIFHE 122 (357)
T ss_dssp ---CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGGGGGTT-TSC-CSEEEEHHHHHHHHHTTCCCSSCCEEEEC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcchhhccc-Cce-EeeecCcHHHHHHHHhhcccCCCCEEEEC
Confidence 45899999999999999999999999 9999999987552 11122 344 7899999999999997 49999998
Q ss_pred CCc--------------------hhhhcccccCCCEEEEecCcccccCCCCcc-----cc-cchHHHHHHHHHHHHHHh-
Q 021854 171 SEG--------------------FISNAGSLKGVQHVILLSQLSVYRGSGGIQ-----AL-MKGNARKLAEQDESMLMA- 223 (306)
Q Consensus 171 ~~g--------------------~~~~~a~~~gvkr~V~iSS~~~~~~~~~~~-----~~-~~~~a~~~~~~aE~~l~~- 223 (306)
++. .+.+++.+.++ +||++||..++....... .. ....+...|..+|.+++.
T Consensus 123 A~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~-r~V~~SS~~v~g~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~ 201 (357)
T 2x6t_A 123 GACSSTTEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAATYGGRTSDFIESREYEKPLNVFGYSKFLFDEYVRQI 201 (357)
T ss_dssp CSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHTC-CEEEEEEGGGGCSCSSCCCSSGGGCCCSSHHHHHHHHHHHHHHHH
T ss_pred CcccCCccCCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcchHHhCCCCCCCcCCcCCCCCCChhHHHHHHHHHHHHHH
Confidence 431 03455667788 999999998876432200 00 011233446666776653
Q ss_pred ---cCCCEEEEEcCcccCCCCC------------------Ccce-eeecCCC-CccccCHHHHHHHHHHHhhCCCCCCcE
Q 021854 224 ---SGIPYTIIRTGVLQNTPGG------------------KQGF-QFEEGCA-ANGSLSKEDAAFICVEALESIPQTGLI 280 (306)
Q Consensus 224 ---sgi~~tiiRPg~l~~~~~~------------------~~~~-~~~~g~~-~~~~Is~~DVA~~iv~aL~~~~~~g~~ 280 (306)
.++++++|||+++...... +..+ .++.+.. ...+++++|+|++++.+++++. +++
T Consensus 202 ~~~~g~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ai~~~~~~~~--~~~ 279 (357)
T 2x6t_A 202 LPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGV--SGI 279 (357)
T ss_dssp GGGCSSCEEEEEECEEESSSCTTCGGGSCHHHHHHHHHHTTCCCEEETTGGGCEECEEEHHHHHHHHHHHHHHCC--CEE
T ss_pred HHHcCCCEEEEecCeEECCCCCCCcccchHHHHHHHHHHcCCCcEEeCCCCcceEccEEHHHHHHHHHHHHhcCC--CCe
Confidence 4899999999986532211 1111 1223344 5678999999999999998766 789
Q ss_pred EEEecCC-cCHHHHHHHHHHHhhh
Q 021854 281 FEVVNGE-EKVSDWKKCFSRLMEK 303 (306)
Q Consensus 281 ~~v~~g~-~s~~d~~~l~~~l~~~ 303 (306)
|+++++. .++.|+.+++.++.+.
T Consensus 280 ~~i~~~~~~s~~e~~~~i~~~~g~ 303 (357)
T 2x6t_A 280 FNLGTGRAESFQAVADATLAYHKK 303 (357)
T ss_dssp EEESCSCCEEHHHHHHHHHHHHTC
T ss_pred EEecCCCcccHHHHHHHHHHHcCC
Confidence 9999865 5899999999888765
|
| >1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=2.8e-21 Score=175.31 Aligned_cols=191 Identities=20% Similarity=0.162 Sum_probs=143.9
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcC--ccEEEEcCCc----
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRG--VRSIICPSEG---- 173 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~--~d~vi~~~~g---- 173 (306)
|+|+||||+|+||++++++|+ +|++|++++|+. ..+.+|+.|.+++.+++++ +|+|||+++.
T Consensus 1 m~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~-----------~~~~~D~~d~~~~~~~~~~~~~d~vih~a~~~~~~ 68 (299)
T 1n2s_A 1 MNILLFGKTGQVGWELQRSLA-PVGNLIALDVHS-----------KEFCGDFSNPKGVAETVRKLRPDVIVNAAAHTAVD 68 (299)
T ss_dssp CEEEEECTTSHHHHHHHHHTT-TTSEEEEECTTC-----------SSSCCCTTCHHHHHHHHHHHCCSEEEECCCCCCHH
T ss_pred CeEEEECCCCHHHHHHHHHhh-cCCeEEEecccc-----------ccccccCCCHHHHHHHHHhcCCCEEEECcccCCHh
Confidence 589999999999999999999 899999999986 2467899999999999987 9999998431
Q ss_pred ------------------hhhhcccccCCCEEEEecCcccccCCCCc--c---c-ccchHHHHHHHHHHHHHHhcCCCEE
Q 021854 174 ------------------FISNAGSLKGVQHVILLSQLSVYRGSGGI--Q---A-LMKGNARKLAEQDESMLMASGIPYT 229 (306)
Q Consensus 174 ------------------~~~~~a~~~gvkr~V~iSS~~~~~~~~~~--~---~-~~~~~a~~~~~~aE~~l~~sgi~~t 229 (306)
.+.+++.+.++ ||||+||.++|...... . . .....+...|..+|.+++....+++
T Consensus 69 ~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~ 147 (299)
T 1n2s_A 69 KAESEPELAQLLNATSVEAIAKAANETGA-WVVHYSTDYVFPGTGDIPWQETDATSPLNVYGKTKLAGEKALQDNCPKHL 147 (299)
T ss_dssp HHTTCHHHHHHHHTHHHHHHHHHHTTTTC-EEEEEEEGGGSCCCTTCCBCTTSCCCCSSHHHHHHHHHHHHHHHHCSSEE
T ss_pred hhhcCHHHHHHHHHHHHHHHHHHHHHcCC-cEEEEecccEEeCCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHhCCCeE
Confidence 03455667777 89999999887643210 0 0 0012234457788998888777999
Q ss_pred EEEcCcccCCCCC------------CcceeeecCCCCccccCHHHHHHHHHHHhhCCC--C-CCcEEEEecCC-cCHHHH
Q 021854 230 IIRTGVLQNTPGG------------KQGFQFEEGCAANGSLSKEDAAFICVEALESIP--Q-TGLIFEVVNGE-EKVSDW 293 (306)
Q Consensus 230 iiRPg~l~~~~~~------------~~~~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~-~g~~~~v~~g~-~s~~d~ 293 (306)
++||+++...... +..+.. .++....+++++|+|++++.+++++. . .+++|++++++ .++.|+
T Consensus 148 ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~e~ 226 (299)
T 1n2s_A 148 IFRTSWVYAGKGNNFAKTMLRLAKERQTLSV-INDQYGAPTGAELLADCTAHAIRVALNKPEVAGLYHLVAGGTTTWHDY 226 (299)
T ss_dssp EEEECSEECSSSCCHHHHHHHHHHHCSEEEE-ECSCEECCEEHHHHHHHHHHHHHHHHHCGGGCEEEECCCBSCEEHHHH
T ss_pred EEeeeeecCCCcCcHHHHHHHHHhcCCCEEe-ecCcccCCeeHHHHHHHHHHHHHHhccccccCceEEEeCCCCCCHHHH
Confidence 9999996533211 111222 34556789999999999999998762 2 47899999865 589999
Q ss_pred HHHHHHHhhhc
Q 021854 294 KKCFSRLMEKT 304 (306)
Q Consensus 294 ~~l~~~l~~~~ 304 (306)
.+++.++.+..
T Consensus 227 ~~~i~~~~g~~ 237 (299)
T 1n2s_A 227 AALVFDEARKA 237 (299)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHhCCC
Confidence 99998887654
|
| >3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} | Back alignment and structure |
|---|
Probab=99.86 E-value=2.5e-21 Score=176.78 Aligned_cols=195 Identities=15% Similarity=0.092 Sum_probs=138.6
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcch----hhh---hc-CCCceeeeccCCCHHHHHHHhcCccEEE
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN----AME---SF-GTYVESMAGDASNKKFLKTALRGVRSII 168 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~----~~~---~~-~~~v~~v~~D~~d~~~l~~~~~~~d~vi 168 (306)
.++++||||||||+||++++++|+++|++|++++|+... ... .. ..+++++.+|+. ++|+||
T Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~----------~~d~vi 74 (321)
T 3vps_A 5 TLKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGKFLEKPVLELEERDLS----------DVRLVY 74 (321)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSSCCSSCCTTSSEEECSCGGGCCHHHHT----------TEEEEE
T ss_pred cCCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcccccchhhhhhhccCCCeeEEeCccc----------cCCEEE
Confidence 357899999999999999999999999999999998762 111 11 135666666665 899999
Q ss_pred EcCCc---------------------hhhhcccccCCCEEEEecCcccccCCCCc-----ccc-cchHHHHHHHHHHHHH
Q 021854 169 CPSEG---------------------FISNAGSLKGVQHVILLSQLSVYRGSGGI-----QAL-MKGNARKLAEQDESML 221 (306)
Q Consensus 169 ~~~~g---------------------~~~~~a~~~gvkr~V~iSS~~~~~~~~~~-----~~~-~~~~a~~~~~~aE~~l 221 (306)
|+++. .+++++.+.++++|||+||.++|...... ... ....+...|..+|.++
T Consensus 75 ~~a~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~v~~~v~~SS~~v~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~ 154 (321)
T 3vps_A 75 HLASHKSVPRSFKQPLDYLDNVDSGRHLLALCTSVGVPKVVVGSTCEVYGQADTLPTPEDSPLSPRSPYAASKVGLEMVA 154 (321)
T ss_dssp ECCCCCCHHHHTTSTTTTHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHH
T ss_pred ECCccCChHHHHhCHHHHHHHHHHHHHHHHHHHHcCCCeEEEecCHHHhCCCCCCCCCCCCCCCCCChhHHHHHHHHHHH
Confidence 98431 14566777899999999999887643220 000 0112334455666666
Q ss_pred Hh----cCC-CEEEEEcCcccCCCCC--------------Cccee-eecCCCCccccCHHHHHHHHHHHhhCCCCCCcEE
Q 021854 222 MA----SGI-PYTIIRTGVLQNTPGG--------------KQGFQ-FEEGCAANGSLSKEDAAFICVEALESIPQTGLIF 281 (306)
Q Consensus 222 ~~----sgi-~~tiiRPg~l~~~~~~--------------~~~~~-~~~g~~~~~~Is~~DVA~~iv~aL~~~~~~g~~~ 281 (306)
+. .++ +++++||+.+...... +..+. ++.++....+++++|+|++++.++.++.. | +|
T Consensus 155 ~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~-g-~~ 232 (321)
T 3vps_A 155 GAHQRASVAPEVGIVRFFNVYGPGERPDALVPRLCANLLTRNELPVEGDGEQRRDFTYITDVVDKLVALANRPLP-S-VV 232 (321)
T ss_dssp HHHHHSSSSCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHSEEEEETTSCCEECEEEHHHHHHHHHHGGGSCCC-S-EE
T ss_pred HHHHHHcCCCceEEEEeccccCcCCCCCChHHHHHHHHHcCCCeEEeCCCCceEceEEHHHHHHHHHHHHhcCCC-C-eE
Confidence 54 689 9999999986533221 11122 23455667899999999999999988766 6 99
Q ss_pred EEecCC-cCHHHHHHHHHHHhhhc
Q 021854 282 EVVNGE-EKVSDWKKCFSRLMEKT 304 (306)
Q Consensus 282 ~v~~g~-~s~~d~~~l~~~l~~~~ 304 (306)
++++++ .++.|+.+++. ..+..
T Consensus 233 ~i~~~~~~s~~e~~~~i~-~~g~~ 255 (321)
T 3vps_A 233 NFGSGQSLSVNDVIRILQ-ATSPA 255 (321)
T ss_dssp EESCSCCEEHHHHHHHHH-TTCTT
T ss_pred EecCCCcccHHHHHHHHH-HhCCC
Confidence 999876 58999999988 66543
|
| >2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} | Back alignment and structure |
|---|
Probab=99.86 E-value=5.2e-21 Score=175.18 Aligned_cols=202 Identities=17% Similarity=0.112 Sum_probs=133.8
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEec-Ccch---hhh--hcC---CCceeeeccCCCHHHHHHHhcCccEEEE
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVK-DKRN---AME--SFG---TYVESMAGDASNKKFLKTALRGVRSIIC 169 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R-~~~~---~~~--~~~---~~v~~v~~D~~d~~~l~~~~~~~d~vi~ 169 (306)
+++||||||+|+||++++++|+++|++|++++| +++. ... ..+ .+++++.+|++|.++++++++++|+|||
T Consensus 1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih 80 (322)
T 2p4h_X 1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFLTNLPGASEKLHFFNADLSNPDSFAAAIEGCVGIFH 80 (322)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCCHHHHTSTTHHHHEEECCCCTTCGGGGHHHHTTCSEEEE
T ss_pred CCEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHHHHHHhhhccCCceEEEecCCCCHHHHHHHHcCCCEEEE
Confidence 478999999999999999999999999999998 6532 111 111 2467889999999999999999999999
Q ss_pred cCCch---------------------hhhccccc-CCCEEEEecCcccccCCCCc----c-------cc----cch--HH
Q 021854 170 PSEGF---------------------ISNAGSLK-GVQHVILLSQLSVYRGSGGI----Q-------AL----MKG--NA 210 (306)
Q Consensus 170 ~~~g~---------------------~~~~a~~~-gvkr~V~iSS~~~~~~~~~~----~-------~~----~~~--~a 210 (306)
+++.. +.+++.+. ++++||++||.+++...... . .+ .+. .+
T Consensus 81 ~A~~~~~~~~~~~~~~~~~nv~gt~~l~~aa~~~~~~~~iV~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~p~~~~Y 160 (322)
T 2p4h_X 81 TASPIDFAVSEPEEIVTKRTVDGALGILKACVNSKTVKRFIYTSSGSAVSFNGKDKDVLDESDWSDVDLLRSVKPFGWNY 160 (322)
T ss_dssp CCCCC--------CHHHHHHHHHHHHHHHHHTTCSSCCEEEEEEEGGGTSCSSSCCSEECTTCCCCHHHHHHHCCTTHHH
T ss_pred cCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccHHHcccCCCCCeecCCccccchhhhcccCcccccH
Confidence 84210 23345555 79999999998754321100 0 00 000 12
Q ss_pred HHHHHHHHHHH----HhcCCCEEEEEcCcccCCCCCCc-c-ee------e-----ecCCCCccccCHHHHHHHHHHHhhC
Q 021854 211 RKLAEQDESML----MASGIPYTIIRTGVLQNTPGGKQ-G-FQ------F-----EEGCAANGSLSKEDAAFICVEALES 273 (306)
Q Consensus 211 ~~~~~~aE~~l----~~sgi~~tiiRPg~l~~~~~~~~-~-~~------~-----~~g~~~~~~Is~~DVA~~iv~aL~~ 273 (306)
...|..+|.++ +..+++++++||+++........ . .. . ..+.....+++++|||++++.++++
T Consensus 161 ~~sK~~~e~~~~~~~~~~gi~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~v~Dva~a~~~~~~~ 240 (322)
T 2p4h_X 161 AVSKTLAEKAVLEFGEQNGIDVVTLILPFIVGRFVCPKLPDSIEKALVLVLGKKEQIGVTRFHMVHVDDVARAHIYLLEN 240 (322)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCEEEEEECEEESCCCSSSCCHHHHHHTHHHHSCGGGCCEEEEEEEEHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHhcCCcEEEEcCCceECCCCCCCCCchHHHHHHHHhCCCccCcCCCcCEEEHHHHHHHHHHHhhC
Confidence 22344445544 34699999999998653221110 0 00 0 0111112589999999999999987
Q ss_pred CCCCCcEEEEecCCcCHHHHHHHHHHHh
Q 021854 274 IPQTGLIFEVVNGEEKVSDWKKCFSRLM 301 (306)
Q Consensus 274 ~~~~g~~~~v~~g~~s~~d~~~l~~~l~ 301 (306)
+...++ |++.+++.++.|+.+++.+..
T Consensus 241 ~~~~g~-~~~~~~~~s~~e~~~~i~~~~ 267 (322)
T 2p4h_X 241 SVPGGR-YNCSPFIVPIEEMSQLLSAKY 267 (322)
T ss_dssp CCCCEE-EECCCEEEEHHHHHHHHHHHC
T ss_pred cCCCCC-EEEcCCCCCHHHHHHHHHHhC
Confidence 655554 886555568899988887654
|
| >3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} | Back alignment and structure |
|---|
Probab=99.86 E-value=1.8e-21 Score=174.47 Aligned_cols=178 Identities=13% Similarity=0.020 Sum_probs=131.5
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcCCc-----
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG----- 173 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~g----- 173 (306)
+++||||||+|+||++++++|+++|++|++++|+.++.. ..+++++.+|++|.+.+.++++++|+|||+++.
T Consensus 2 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~---~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a~~~~~~~ 78 (267)
T 3ay3_A 2 LNRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAA---EAHEEIVACDLADAQAVHDLVKDCDGIIHLGGVSVERP 78 (267)
T ss_dssp EEEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCCC---CTTEEECCCCTTCHHHHHHHHTTCSEEEECCSCCSCCC
T ss_pred CceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCcccc---CCCccEEEccCCCHHHHHHHHcCCCEEEECCcCCCCCC
Confidence 578999999999999999999999999999999876422 246789999999999999999999999998431
Q ss_pred -------------hhhhcccccCCCEEEEecCcccccCCCCcc------cc-cchHHHHHHHHHHHHHH----hcCCCEE
Q 021854 174 -------------FISNAGSLKGVQHVILLSQLSVYRGSGGIQ------AL-MKGNARKLAEQDESMLM----ASGIPYT 229 (306)
Q Consensus 174 -------------~~~~~a~~~gvkr~V~iSS~~~~~~~~~~~------~~-~~~~a~~~~~~aE~~l~----~sgi~~t 229 (306)
.+.+++.+.+++|||++||..++....... .. ....+...|..+|.+++ +.+++++
T Consensus 79 ~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~ 158 (267)
T 3ay3_A 79 WNDILQANIIGAYNLYEAARNLGKPRIVFASSNHTIGYYPRTTRIDTEVPRRPDSLYGLSKCFGEDLASLYYHKFDIETL 158 (267)
T ss_dssp HHHHHHHTHHHHHHHHHHHHHTTCCEEEEEEEGGGSTTSBTTSCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHTTCCCEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCHHHhCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHcCCCEE
Confidence 134556778899999999998875422100 00 00112233445555543 4699999
Q ss_pred EEEcCcccCCCCCCcceeeecCCCCccccCHHHHHHHHHHHhhCCCCCCcEEEEecCC
Q 021854 230 IIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVVNGE 287 (306)
Q Consensus 230 iiRPg~l~~~~~~~~~~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~~~g~~~~v~~g~ 287 (306)
++||+++.+.+. .+.....+++++|+|++++.+++.+...+.+|++.++.
T Consensus 159 ~lrp~~v~~~~~--------~~~~~~~~~~~~dva~~~~~~~~~~~~~~~~~~~~~~~ 208 (267)
T 3ay3_A 159 NIRIGSCFPKPK--------DARMMATWLSVDDFMRLMKRAFVAPKLGCTVVYGASAN 208 (267)
T ss_dssp EEEECBCSSSCC--------SHHHHHHBCCHHHHHHHHHHHHHSSCCCEEEEEECCSC
T ss_pred EEeceeecCCCC--------CCCeeeccccHHHHHHHHHHHHhCCCCCceeEecCCCc
Confidence 999999753321 11223568999999999999998876555678877643
|
| >4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.86 E-value=4.5e-21 Score=174.50 Aligned_cols=191 Identities=15% Similarity=0.138 Sum_probs=131.1
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcCCch-----
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEGF----- 174 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~g~----- 174 (306)
|+|||||||||||++++++|+++||+|++++|++.+. . +.. .+.....++++|+|||+++..
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~~------~---~~~----~~~~~~~l~~~d~vihla~~~i~~~~ 67 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGPG------R---ITW----DELAASGLPSCDAAVNLAGENILNPL 67 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTT------E---EEH----HHHHHHCCCSCSEEEECCCCCSSCTT
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCcC------e---eec----chhhHhhccCCCEEEEeccCcccchh
Confidence 6899999999999999999999999999999987431 1 112 233356688999999974310
Q ss_pred ---------------------hhhcccccC--CCEEEEecCcccccCCCCcc-----cccc-hHHHHHH--HHHHHHHHh
Q 021854 175 ---------------------ISNAGSLKG--VQHVILLSQLSVYRGSGGIQ-----ALMK-GNARKLA--EQDESMLMA 223 (306)
Q Consensus 175 ---------------------~~~~a~~~g--vkr~V~iSS~~~~~~~~~~~-----~~~~-~~a~~~~--~~aE~~l~~ 223 (306)
+.+++...+ .++||+.||.++|.+..... +..+ ..+...+ .+.+....+
T Consensus 68 ~~~~~~~~~~~~~~~v~~t~~l~~~~~~~~~~~~~~i~~Ss~~vyg~~~~~~~~E~~p~~~~~~~~~~~~~~e~~~~~~~ 147 (298)
T 4b4o_A 68 RRWNETFQKEVLGSRLETTQLLAKAITKAPQPPKAWVLVTGVAYYQPSLTAEYDEDSPGGDFDFFSNLVTKWEAAARLPG 147 (298)
T ss_dssp SCCCHHHHHHHHHHHHHHHHHHHHHHHHCSSCCSEEEEEEEGGGSCCCSSCCBCTTCCCSCSSHHHHHHHHHHHHHCCSS
T ss_pred hhhhhhhhhhhhhHHHHHHHHHHHHHHHhCCCceEEEEEeeeeeecCCCCCcccccCCccccchhHHHHHHHHHHHHhhc
Confidence 223344444 45688889988886432211 0000 1111112 222223345
Q ss_pred cCCCEEEEEcCcccCCCC-----------CCcceeeecCCCCccccCHHHHHHHHHHHhhCCCCCCcEEEEecCC-cCHH
Q 021854 224 SGIPYTIIRTGVLQNTPG-----------GKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVVNGE-EKVS 291 (306)
Q Consensus 224 sgi~~tiiRPg~l~~~~~-----------~~~~~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~~~g~~~~v~~g~-~s~~ 291 (306)
.+++++++||+.+....+ .+....++.++...++|+++|+|+++..+++++...+ +||+++++ .++.
T Consensus 148 ~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~ihv~Dva~a~~~~~~~~~~~g-~yn~~~~~~~t~~ 226 (298)
T 4b4o_A 148 DSTRQVVVRSGVVLGRGGGAMGHMLLPFRLGLGGPIGSGHQFFPWIHIGDLAGILTHALEANHVHG-VLNGVAPSSATNA 226 (298)
T ss_dssp SSSEEEEEEECEEECTTSHHHHHHHHHHHTTCCCCBTTSCSBCCEEEHHHHHHHHHHHHHCTTCCE-EEEESCSCCCBHH
T ss_pred cCCceeeeeeeeEEcCCCCchhHHHHHHhcCCcceecccCceeecCcHHHHHHHHHHHHhCCCCCC-eEEEECCCccCHH
Confidence 789999999998653321 2233345567777899999999999999999876554 99999866 5899
Q ss_pred HHHHHHHHHhhhc
Q 021854 292 DWKKCFSRLMEKT 304 (306)
Q Consensus 292 d~~~l~~~l~~~~ 304 (306)
|+.+.+++..+++
T Consensus 227 e~~~~ia~~lgrp 239 (298)
T 4b4o_A 227 EFAQTFGAALGRR 239 (298)
T ss_dssp HHHHHHHHHHTCC
T ss_pred HHHHHHHHHhCcC
Confidence 9999999988764
|
| >1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.86 E-value=2.6e-21 Score=176.02 Aligned_cols=198 Identities=16% Similarity=0.072 Sum_probs=135.7
Q ss_pred eEEEEcCCChHHHHHHHHHHHCC-CeEEEEecCcchhh-hhcCCCceeeeccCCCHHHHHHHhcC-----ccEEEEcCCc
Q 021854 101 AVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAM-ESFGTYVESMAGDASNKKFLKTALRG-----VRSIICPSEG 173 (306)
Q Consensus 101 ~ilVtGatG~iG~~l~~~L~~~g-~~V~~l~R~~~~~~-~~~~~~v~~v~~D~~d~~~l~~~~~~-----~d~vi~~~~g 173 (306)
+||||||+|+||++++++|+++| ++|+++.|+..... ...+ +++ +.+|+.|.+.++.++++ +|+|||+++.
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~-~~~-~~~d~~~~~~~~~~~~~~~~~~~d~vi~~a~~ 78 (310)
T 1eq2_A 1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLV-DLN-IADYMDKEDFLIQIMAGEEFGDVEAIFHEGAC 78 (310)
T ss_dssp CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGHHHH-TSC-CSEEEEHHHHHHHHHTTCCCSSCCEEEECCSC
T ss_pred CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCchhhhcC-cce-eccccccHHHHHHHHhccccCCCcEEEECccc
Confidence 58999999999999999999999 99999999876521 1111 234 78999999999999986 8999998331
Q ss_pred --------------------hhhhcccccCCCEEEEecCcccccCCCCcc-----c-ccchHHHHHHHHHHHHHHh----
Q 021854 174 --------------------FISNAGSLKGVQHVILLSQLSVYRGSGGIQ-----A-LMKGNARKLAEQDESMLMA---- 223 (306)
Q Consensus 174 --------------------~~~~~a~~~gvkr~V~iSS~~~~~~~~~~~-----~-~~~~~a~~~~~~aE~~l~~---- 223 (306)
.+.+++.+.++ +||++||.+++....... . .....+...|..+|.+++.
T Consensus 79 ~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v~g~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~ 157 (310)
T 1eq2_A 79 SSTTEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAATYGGRTSDFIESREYEKPLNVYGYSKFLFDEYVRQILPE 157 (310)
T ss_dssp CCTTCCCHHHHHHHTHHHHHHHHHHHHHHTC-CEEEEEEGGGGTTCCSCBCSSGGGCCCSSHHHHHHHHHHHHHHHHGGG
T ss_pred ccCcccCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEeeHHHhCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHH
Confidence 14456677888 999999998875432100 0 0011233446667777654
Q ss_pred cCCCEEEEEcCcccCCCCC------------------Ccce-eeecCCC-CccccCHHHHHHHHHHHhhCCCCCCcEEEE
Q 021854 224 SGIPYTIIRTGVLQNTPGG------------------KQGF-QFEEGCA-ANGSLSKEDAAFICVEALESIPQTGLIFEV 283 (306)
Q Consensus 224 sgi~~tiiRPg~l~~~~~~------------------~~~~-~~~~g~~-~~~~Is~~DVA~~iv~aL~~~~~~g~~~~v 283 (306)
.+++++++||+++...... +..+ .++.+.. ...+++++|+|++++.+++++. +++|++
T Consensus 158 ~g~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~v~Dva~~~~~~~~~~~--~~~~~i 235 (310)
T 1eq2_A 158 ANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGV--SGIFNL 235 (310)
T ss_dssp CSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHHHHHHHHHHHHHCC--CEEEEE
T ss_pred cCCCEEEEeCCcEECcCCCCCCccchHHHHHHHHHHcCCCcEEecCCCcceEccEEHHHHHHHHHHHHhcCC--CCeEEE
Confidence 4899999999996532211 1111 1234455 6789999999999999998776 789999
Q ss_pred ecCC-cCHHHHHHHHHHHhhh
Q 021854 284 VNGE-EKVSDWKKCFSRLMEK 303 (306)
Q Consensus 284 ~~g~-~s~~d~~~l~~~l~~~ 303 (306)
+++. .++.|+.+++.++.+.
T Consensus 236 ~~~~~~s~~e~~~~i~~~~g~ 256 (310)
T 1eq2_A 236 GTGRAESFQAVADATLAYHKK 256 (310)
T ss_dssp SCSCCBCHHHHHHHC------
T ss_pred eCCCccCHHHHHHHHHHHcCC
Confidence 9865 6899999988877654
|
| >3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A | Back alignment and structure |
|---|
Probab=99.86 E-value=5.5e-21 Score=179.18 Aligned_cols=177 Identities=14% Similarity=0.076 Sum_probs=137.0
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCC-eEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcCCc-----
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG----- 173 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~g~-~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~g----- 173 (306)
|+||||||||+||++++++|+++|+ +|+.+.|+ .|.+.+.++++++|+|||+++.
T Consensus 1 M~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~-------------------~d~~~l~~~~~~~d~Vih~a~~~~~~~ 61 (369)
T 3st7_A 1 MNIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQ-------------------TKEEELESALLKADFIVHLAGVNRPEH 61 (369)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCCCEEEECCTT-------------------CCHHHHHHHHHHCSEEEECCCSBCTTC
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCEEEEECCC-------------------CCHHHHHHHhccCCEEEECCcCCCCCC
Confidence 5899999999999999999999998 76665554 7889999999999999998431
Q ss_pred -------------hhhhcccccCCC-EEEEecCcccccCCCCcccccchHHHHHHHHHHHHHHh----cCCCEEEEEcCc
Q 021854 174 -------------FISNAGSLKGVQ-HVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMA----SGIPYTIIRTGV 235 (306)
Q Consensus 174 -------------~~~~~a~~~gvk-r~V~iSS~~~~~~~~~~~~~~~~~a~~~~~~aE~~l~~----sgi~~tiiRPg~ 235 (306)
.+++++++.+++ +||++||..++. ...| ...|..+|.++++ .+++++++||++
T Consensus 62 ~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~Ss~~~~~----~~~Y-----~~sK~~~E~~~~~~~~~~g~~~~i~R~~~ 132 (369)
T 3st7_A 62 DKEFSLGNVSYLDHVLDILTRNTKKPAILLSSSIQATQ----DNPY-----GESKLQGEQLLREYAEEYGNTVYIYRWPN 132 (369)
T ss_dssp STTCSSSCCBHHHHHHHHHTTCSSCCEEEEEEEGGGGS----CSHH-----HHHHHHHHHHHHHHHHHHCCCEEEEEECE
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCchhhcC----CCCc-----hHHHHHHHHHHHHHHHHhCCCEEEEECCc
Confidence 156677888888 999999998876 2233 2345566776654 799999999998
Q ss_pred ccCCCC----------------CCcceeeecCCCCccccCHHHHHHHHHHHhhCCCCC-CcEEEEecCC-cCHHHHHHHH
Q 021854 236 LQNTPG----------------GKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQT-GLIFEVVNGE-EKVSDWKKCF 297 (306)
Q Consensus 236 l~~~~~----------------~~~~~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~~~-g~~~~v~~g~-~s~~d~~~l~ 297 (306)
+..... .+..+.+..++....+++++|+|++++.++..+... +++|+++++. .++.|+.+++
T Consensus 133 v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~~i~~~~~~s~~e~~~~~ 212 (369)
T 3st7_A 133 LFGKWCKPNYNSVIATFCYKIARNEEIQVNDRNVELTLNYVDDIVAEIKRAIEGTPTIENGVPTVPNVFKVTLGEIVDLL 212 (369)
T ss_dssp EECTTCCTTSSCHHHHHHHHHHTTCCCCCSCTTCEEEEEEHHHHHHHHHHHHHTCCCEETTEECCSCCEEEEHHHHHHHH
T ss_pred eeCCCCCCCcchHHHHHHHHHHcCCCeEecCCCeEEEEEEHHHHHHHHHHHHhCCcccCCceEEeCCCCceeHHHHHHHH
Confidence 653211 122233334555678999999999999999987764 7899999865 5899999999
Q ss_pred HHHhhhc
Q 021854 298 SRLMEKT 304 (306)
Q Consensus 298 ~~l~~~~ 304 (306)
.++.+..
T Consensus 213 ~~~~g~~ 219 (369)
T 3st7_A 213 YKFKQSR 219 (369)
T ss_dssp HHHHHHH
T ss_pred HHHhCCC
Confidence 9887653
|
| >2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=2.5e-20 Score=171.89 Aligned_cols=204 Identities=8% Similarity=-0.068 Sum_probs=143.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhh----hhc--CCCceeeeccCCCHHHHHHHhcC--ccEEEE
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM----ESF--GTYVESMAGDASNKKFLKTALRG--VRSIIC 169 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~----~~~--~~~v~~v~~D~~d~~~l~~~~~~--~d~vi~ 169 (306)
++|+||||||+|+||++++++|+++|++|++++|+.++.. ... ..+++++.+|++|.+++.+++++ +|+|||
T Consensus 2 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih 81 (345)
T 2z1m_A 2 SGKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFASWRLKELGIENDVKIIHMDLLEFSNIIRTIEKVQPDEVYN 81 (345)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTTHHHHHTTCTTTEEECCCCTTCHHHHHHHHHHHCCSEEEE
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccccccHhhccccCceeEEECCCCCHHHHHHHHHhcCCCEEEE
Confidence 3689999999999999999999999999999999876532 111 13688999999999999999986 599999
Q ss_pred cCCch----------------------hhhcccccCC-CEEEEecCcccccCCCC-----cccc-cchHHHHHHHHHHHH
Q 021854 170 PSEGF----------------------ISNAGSLKGV-QHVILLSQLSVYRGSGG-----IQAL-MKGNARKLAEQDESM 220 (306)
Q Consensus 170 ~~~g~----------------------~~~~a~~~gv-kr~V~iSS~~~~~~~~~-----~~~~-~~~~a~~~~~~aE~~ 220 (306)
+++.. +.+++.+.++ ++||++||.++|..... .... ....+...|..+|.+
T Consensus 82 ~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~ 161 (345)
T 2z1m_A 82 LAAQSFVGVSFEQPILTAEVDAIGVLRILEALRTVKPDTKFYQASTSEMFGKVQEIPQTEKTPFYPRSPYAVAKLFGHWI 161 (345)
T ss_dssp CCCCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHH
T ss_pred CCCCcchhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEechhhcCCCCCCCCCccCCCCCCChhHHHHHHHHHH
Confidence 84410 3345566777 89999999988753211 0000 011233345555665
Q ss_pred HH----hcCCCEEEEEcCccc-CCCC----------------CC-c-ceeeecCCCCccccCHHHHHHHHHHHhhCCCCC
Q 021854 221 LM----ASGIPYTIIRTGVLQ-NTPG----------------GK-Q-GFQFEEGCAANGSLSKEDAAFICVEALESIPQT 277 (306)
Q Consensus 221 l~----~sgi~~tiiRPg~l~-~~~~----------------~~-~-~~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~~~ 277 (306)
++ +.+++++++|+.... .... .+ . ...++.+.....+++++|+|++++.+++++.
T Consensus 162 ~~~~~~~~~~~~~~~r~~~~~gpg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Dva~a~~~~~~~~~-- 239 (345)
T 2z1m_A 162 TVNYREAYNMFACSGILFNHESPLRGIEFVTRKITYSLARIKYGLQDKLVLGNLNAKRDWGYAPEYVEAMWLMMQQPE-- 239 (345)
T ss_dssp HHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEECCEEHHHHHHHHHHHHTSSS--
T ss_pred HHHHHHHhCCceEeeeeeeecCCCCCCcchhHHHHHHHHHHHcCCCCeeeeCCCCceeeeEEHHHHHHHHHHHHhCCC--
Confidence 54 348999998876532 1111 01 1 1123344445679999999999999998764
Q ss_pred CcEEEEecCC-cCHHHHHHHHHHHhhh
Q 021854 278 GLIFEVVNGE-EKVSDWKKCFSRLMEK 303 (306)
Q Consensus 278 g~~~~v~~g~-~s~~d~~~l~~~l~~~ 303 (306)
+++|++++++ .++.|+.+++.++.+.
T Consensus 240 ~~~~~i~~~~~~s~~e~~~~i~~~~g~ 266 (345)
T 2z1m_A 240 PDDYVIATGETHTVREFVEKAAKIAGF 266 (345)
T ss_dssp CCCEEECCSCCEEHHHHHHHHHHHTTC
T ss_pred CceEEEeCCCCccHHHHHHHHHHHhCC
Confidence 3689999875 5899999999888764
|
| >2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.86 E-value=7.7e-22 Score=170.44 Aligned_cols=175 Identities=14% Similarity=0.055 Sum_probs=133.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCC--eEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcCCch-
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRT--RIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEGF- 174 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~--~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~g~- 174 (306)
++|+|+||||+|+||++++++|+++|+ +|++++|++++ ...+++++.+|+.|.+++.+++ +|+|||+++..
T Consensus 4 ~~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~----~~~~~~~~~~D~~~~~~~~~~~--~d~vi~~a~~~~ 77 (215)
T 2a35_A 4 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA----EHPRLDNPVGPLAELLPQLDGS--IDTAFCCLGTTI 77 (215)
T ss_dssp CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC----CCTTEECCBSCHHHHGGGCCSC--CSEEEECCCCCH
T ss_pred CCceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc----cCCCceEEeccccCHHHHHHhh--hcEEEECeeecc
Confidence 568999999999999999999999998 99999998865 2347888999999998888887 99999984311
Q ss_pred -------------------hhhcccccCCCEEEEecCcccccCCCCcccccchHHHHHHHHHHHHHHhcCCC-EEEEEcC
Q 021854 175 -------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMASGIP-YTIIRTG 234 (306)
Q Consensus 175 -------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~~~~~aE~~l~~sgi~-~tiiRPg 234 (306)
+.+++.+.++++||++||..++... ...| ...|..+|.+++..+++ ++++||+
T Consensus 78 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~--~~~y-----~~sK~~~e~~~~~~~~~~~~~vrp~ 150 (215)
T 2a35_A 78 KEAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADAKS--SIFY-----NRVKGELEQALQEQGWPQLTIARPS 150 (215)
T ss_dssp HHHSSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTTC--SSHH-----HHHHHHHHHHHTTSCCSEEEEEECC
T ss_pred ccCCCHHHHHHhhHHHHHHHHHHHHHcCCCEEEEECCcccCCCC--ccHH-----HHHHHHHHHHHHHcCCCeEEEEeCc
Confidence 3455677899999999999887532 2233 33467788999989999 9999999
Q ss_pred cccCCCCCC---cc---eeeecCCCCccccCHHHHHHHHHHHhhCCCCCCcEEEEecCC
Q 021854 235 VLQNTPGGK---QG---FQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVVNGE 287 (306)
Q Consensus 235 ~l~~~~~~~---~~---~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~~~g~~~~v~~g~ 287 (306)
++....... .. .....++....+++++|+|++++.+++++. +.+|++++++
T Consensus 151 ~v~g~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~--~~~~~i~~~~ 207 (215)
T 2a35_A 151 LLFGPREEFRLAEILAAPIARILPGKYHGIEACDLARALWRLALEEG--KGVRFVESDE 207 (215)
T ss_dssp SEESTTSCEEGGGGTTCCCC----CHHHHHHHHHHHHHHHHHHTCCC--SEEEEEEHHH
T ss_pred eeeCCCCcchHHHHHHHhhhhccCCCcCcEeHHHHHHHHHHHHhcCC--CCceEEcHHH
Confidence 966432210 00 001111223567899999999999998775 6799999754
|
| >2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A | Back alignment and structure |
|---|
Probab=99.85 E-value=2e-21 Score=179.45 Aligned_cols=202 Identities=12% Similarity=0.101 Sum_probs=136.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhh------hh-cCCCceeeeccCCCHHHHHHHhcCccEEEEc
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM------ES-FGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~------~~-~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~ 170 (306)
++|+||||||+||||++++++|+++|++|++++|+.++.. .. ...+++++.+|++|.+.+.++++++|+|||+
T Consensus 8 ~~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih~ 87 (338)
T 2rh8_A 8 GKKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQELGDLKIFRADLTDELSFEAPIAGCDFVFHV 87 (338)
T ss_dssp -CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTHHHHHHGGGSCEEEEECCTTTSSSSHHHHTTCSEEEEE
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHHHHHhcCCCCcEEEEecCCCChHHHHHHHcCCCEEEEe
Confidence 4789999999999999999999999999999999875421 11 1236888999999999999999999999997
Q ss_pred CCc-----------h----------hhhcccccC-CCEEEEecCcccccC---CC-----------------C----ccc
Q 021854 171 SEG-----------F----------ISNAGSLKG-VQHVILLSQLSVYRG---SG-----------------G----IQA 204 (306)
Q Consensus 171 ~~g-----------~----------~~~~a~~~g-vkr~V~iSS~~~~~~---~~-----------------~----~~~ 204 (306)
++. . +.+++.+.+ ++|||++||.+++.. .. + ...
T Consensus 88 A~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~r~V~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~ 167 (338)
T 2rh8_A 88 ATPVHFASEDPENDMIKPAIQGVVNVMKACTRAKSVKRVILTSSAAAVTINQLDGTGLVVDEKNWTDIEFLTSAKPPTWG 167 (338)
T ss_dssp SSCCCC---------CHHHHHHHHHHHHHHHHCTTCCEEEEECCHHHHHHHHHTCSCCCCCTTTTTCC-------CCCCC
T ss_pred CCccCCCCCCcHHHHHHHHHHHHHHHHHHHHHcCCcCEEEEEecHHHeecCCcCCCCcccChhhccchhhccccCCccch
Confidence 321 0 234455665 999999999873210 00 0 012
Q ss_pred ccchHHHHHHHHHHHHHHhcCCCEEEEEcCcccCCCCCCc-ceee------ecCC--------------CCccccCHHHH
Q 021854 205 LMKGNARKLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQ-GFQF------EEGC--------------AANGSLSKEDA 263 (306)
Q Consensus 205 ~~~~~a~~~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~~-~~~~------~~g~--------------~~~~~Is~~DV 263 (306)
|..++..... .+..+.++.++++++|||+.+........ ...+ ..+. ....+++++||
T Consensus 168 Y~~sK~~~E~-~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~v~Dv 246 (338)
T 2rh8_A 168 YPASKTLAEK-AAWKFAEENNIDLITVIPTLMAGSSLTSDVPSSIGLAMSLITGNEFLINGMKGMQMLSGSVSIAHVEDV 246 (338)
T ss_dssp CTTSCCHHHH-HHHHHHHHHTCCEEEEEECEEESCCSSSSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHSSEEEEEHHHH
T ss_pred HHHHHHHHHH-HHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCccccccccccccccCcccEEEHHHH
Confidence 4433322111 12223344699999999998653321110 0000 0111 11258999999
Q ss_pred HHHHHHHhhCCCCCCcEEEEecCCcCHHHHHHHHHHHh
Q 021854 264 AFICVEALESIPQTGLIFEVVNGEEKVSDWKKCFSRLM 301 (306)
Q Consensus 264 A~~iv~aL~~~~~~g~~~~v~~g~~s~~d~~~l~~~l~ 301 (306)
|++++.+++++.. +..|++++++.++.++.+++.+..
T Consensus 247 a~a~~~~~~~~~~-~~~~~~~~~~~s~~e~~~~l~~~~ 283 (338)
T 2rh8_A 247 CRAHIFVAEKESA-SGRYICCAANTSVPELAKFLSKRY 283 (338)
T ss_dssp HHHHHHHHHCTTC-CEEEEECSEEECHHHHHHHHHHHC
T ss_pred HHHHHHHHcCCCc-CCcEEEecCCCCHHHHHHHHHHhC
Confidence 9999999987554 347888877678899988887654
|
| >2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.85 E-value=1.2e-20 Score=174.52 Aligned_cols=202 Identities=11% Similarity=0.039 Sum_probs=144.3
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCC-------CeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHh-cCccEEE
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKR-------TRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTAL-RGVRSII 168 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g-------~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~-~~~d~vi 168 (306)
.++|+||||||+|+||++++++|+++| ++|++++|+.++.......+++++.+|++|.+.+.+++ .++|+||
T Consensus 12 ~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~d~vi 91 (342)
T 2hrz_A 12 FQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPAGFSGAVDARAADLSAPGEAEKLVEARPDVIF 91 (342)
T ss_dssp CSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCTTCCSEEEEEECCTTSTTHHHHHHHTCCSEEE
T ss_pred ccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCccccccCCceeEEEcCCCCHHHHHHHHhcCCCEEE
Confidence 356899999999999999999999999 89999999875533223356889999999999999999 4899999
Q ss_pred EcCCch---------------------hhhcccccC-----CCEEEEecCcccccCCC-----------CcccccchHHH
Q 021854 169 CPSEGF---------------------ISNAGSLKG-----VQHVILLSQLSVYRGSG-----------GIQALMKGNAR 211 (306)
Q Consensus 169 ~~~~g~---------------------~~~~a~~~g-----vkr~V~iSS~~~~~~~~-----------~~~~~~~~~a~ 211 (306)
|+++.. +.+++.+.+ +++||++||..++.... +...| .
T Consensus 92 h~A~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~E~~~~~~~~~Y-----~ 166 (342)
T 2hrz_A 92 HLAAIVSGEAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVFGAPLPYPIPDEFHTTPLTSY-----G 166 (342)
T ss_dssp ECCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGCCSSCCSSBCTTCCCCCSSHH-----H
T ss_pred ECCccCcccccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHhhCCCCCCCcCCCCCCCCcchH-----H
Confidence 984411 234455554 89999999998876431 12223 3
Q ss_pred HHHHHHHHHHHh----cCCCEEEEEcCcccCCCCC------------------Ccceeee-cCCCCccccCHHHHHHHHH
Q 021854 212 KLAEQDESMLMA----SGIPYTIIRTGVLQNTPGG------------------KQGFQFE-EGCAANGSLSKEDAAFICV 268 (306)
Q Consensus 212 ~~~~~aE~~l~~----sgi~~tiiRPg~l~~~~~~------------------~~~~~~~-~g~~~~~~Is~~DVA~~iv 268 (306)
..|..+|.++++ .+++++++|++.+...++. +....+. .++....+++++|+|++++
T Consensus 167 ~sK~~~e~~~~~~~~~~~~~~~~ir~~~v~g~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Dva~~~~ 246 (342)
T 2hrz_A 167 TQKAICELLLSDYSRRGFFDGIGIRLPTICIRPGKPNAAASGFFSNILREPLVGQEAVLPVPESIRHWHASPRSAVGFLI 246 (342)
T ss_dssp HHHHHHHHHHHHHHHTTSCEEEEEEECEETTCCSSCCCSGGGHHHHHHHHHHTTCCEEECSCTTCEEEEECHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCceeEEeeeEEecCCCCcchhHHHHHHHHHHHhcCCCeeccCCCccceeeEehHHHHHHHH
Confidence 345556665543 4789999998764421211 1111111 1223345789999999999
Q ss_pred HHhhCCCC---CCcEEEEecCCcCHHHHHHHHHHHhhh
Q 021854 269 EALESIPQ---TGLIFEVVNGEEKVSDWKKCFSRLMEK 303 (306)
Q Consensus 269 ~aL~~~~~---~g~~~~v~~g~~s~~d~~~l~~~l~~~ 303 (306)
.+++.+.. .+++|++++.+.++.|+.+++.++.+.
T Consensus 247 ~~~~~~~~~~~~~~~~ni~g~~~s~~e~~~~i~~~~g~ 284 (342)
T 2hrz_A 247 HGAMIDVEKVGPRRNLSMPGLSATVGEQIEALRKVAGE 284 (342)
T ss_dssp HHHHSCHHHHCSCCEEECCCEEEEHHHHHHHHHHHHCH
T ss_pred HHHhccccccCCccEEEcCCCCCCHHHHHHHHHHHcCc
Confidence 99987643 467999976556899999988887654
|
| >2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=7.6e-21 Score=175.64 Aligned_cols=203 Identities=12% Similarity=0.099 Sum_probs=136.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchh---hhh--cC---CCceeeeccCCCHHHHHHHhcCccEEEE
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA---MES--FG---TYVESMAGDASNKKFLKTALRGVRSIIC 169 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~---~~~--~~---~~v~~v~~D~~d~~~l~~~~~~~d~vi~ 169 (306)
++++||||||+||||++++++|+++|++|++++|+.+.. ... .+ .+++++.+|++|.+++.++++++|+|||
T Consensus 4 ~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih 83 (337)
T 2c29_D 4 QSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLDLPKAETHLTLWKADLADEGSFDEAIKGCTGVFH 83 (337)
T ss_dssp --CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHHHHHTSTTHHHHEEEEECCTTSTTTTHHHHTTCSEEEE
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHHHHHhcccCCCeEEEEEcCCCCHHHHHHHHcCCCEEEE
Confidence 468999999999999999999999999999999987632 111 11 2578899999999999999999999999
Q ss_pred cCCch---------------------hhhcccccC-CCEEEEecCcccccCCCC-cc----------cc------cchHH
Q 021854 170 PSEGF---------------------ISNAGSLKG-VQHVILLSQLSVYRGSGG-IQ----------AL------MKGNA 210 (306)
Q Consensus 170 ~~~g~---------------------~~~~a~~~g-vkr~V~iSS~~~~~~~~~-~~----------~~------~~~~a 210 (306)
+++.. +.+++.+.+ ++|||++||.+++..... .. .+ ....+
T Consensus 84 ~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~riV~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y 163 (337)
T 2c29_D 84 VATPMDFESKDPENEVIKPTIEGMLGIMKSCAAAKTVRRLVFTSSAGTVNIQEHQLPVYDESCWSDMEFCRAKKMTAWMY 163 (337)
T ss_dssp CCCCCCSSCSSHHHHTHHHHHHHHHHHHHHHHHHSCCCEEEEECCGGGTSCSSSCCSEECTTCCCCHHHHHHHCCTTHHH
T ss_pred eccccCCCCCChHHHHHHHHHHHHHHHHHHHHhCCCccEEEEeeeHhhcccCCCCCcccCcccCCchhhhcccCCccchH
Confidence 84210 234455566 899999999875432110 00 00 00112
Q ss_pred HHHHHHHHHHH----HhcCCCEEEEEcCcccCCCCCCc-ceee------ecCC-------CCccccCHHHHHHHHHHHhh
Q 021854 211 RKLAEQDESML----MASGIPYTIIRTGVLQNTPGGKQ-GFQF------EEGC-------AANGSLSKEDAAFICVEALE 272 (306)
Q Consensus 211 ~~~~~~aE~~l----~~sgi~~tiiRPg~l~~~~~~~~-~~~~------~~g~-------~~~~~Is~~DVA~~iv~aL~ 272 (306)
...|..+|.++ ++.+++++++||+.+........ ...+ ..+. ....+++++|+|++++.+++
T Consensus 164 ~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~v~Dva~a~~~~~~ 243 (337)
T 2c29_D 164 FVSKTLAEQAAWKYAKENNIDFITIIPTLVVGPFIMSSMPPSLITALSPITGNEAHYSIIRQGQFVHLDDLCNAHIYLFE 243 (337)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCEEEEEECEEESCCSCSSCCHHHHHHTHHHHTCGGGHHHHTEEEEEEHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCCccccccCCCCEEEHHHHHHHHHHHhc
Confidence 23344555544 34699999999998653221110 0000 0111 11238999999999999998
Q ss_pred CCCCCCcEEEEecCCcCHHHHHHHHHHHh
Q 021854 273 SIPQTGLIFEVVNGEEKVSDWKKCFSRLM 301 (306)
Q Consensus 273 ~~~~~g~~~~v~~g~~s~~d~~~l~~~l~ 301 (306)
.+... ..|++.+++.++.++.+++.+..
T Consensus 244 ~~~~~-~~~~~~~~~~s~~e~~~~i~~~~ 271 (337)
T 2c29_D 244 NPKAE-GRYICSSHDCIILDLAKMLREKY 271 (337)
T ss_dssp CTTCC-EEEEECCEEEEHHHHHHHHHHHC
T ss_pred CcccC-ceEEEeCCCCCHHHHHHHHHHHC
Confidence 75543 46877766678899988888754
|
| >2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=2.4e-20 Score=173.59 Aligned_cols=201 Identities=13% Similarity=0.119 Sum_probs=143.6
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCC-----CeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcC---ccEEEEc
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKR-----TRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRG---VRSIICP 170 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g-----~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~---~d~vi~~ 170 (306)
+|+||||||+|+||++++++|+++| ++|++++|+.+... ....+++++.+|+.|.+.+.+++++ +|+|||+
T Consensus 1 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~vih~ 79 (364)
T 2v6g_A 1 SSVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW-HEDNPINYVQCDISDPDDSQAKLSPLTDVTHVFYV 79 (364)
T ss_dssp CEEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC-CCSSCCEEEECCTTSHHHHHHHHTTCTTCCEEEEC
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc-cccCceEEEEeecCCHHHHHHHHhcCCCCCEEEEC
Confidence 3789999999999999999999999 99999999886543 2234789999999999999999998 9999998
Q ss_pred CCc-----------------hhhhccccc--CCCEEE-------EecCcccccCCC----Cccc---c-c-chHHHHHHH
Q 021854 171 SEG-----------------FISNAGSLK--GVQHVI-------LLSQLSVYRGSG----GIQA---L-M-KGNARKLAE 215 (306)
Q Consensus 171 ~~g-----------------~~~~~a~~~--gvkr~V-------~iSS~~~~~~~~----~~~~---~-~-~~~a~~~~~ 215 (306)
++. .+.+++.+. ++++|| |+||.++|.... +... . . ...+.
T Consensus 80 a~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~~g~~i~~Ss~~vyg~~~~~~~~~~E~~~~~~~~~~y~---- 155 (364)
T 2v6g_A 80 TWANRSTEQENCEANSKMFRNVLDAVIPNCPNLKHISLQTGRKHYMGPFESYGKIESHDPPYTEDLPRLKYMNFYY---- 155 (364)
T ss_dssp CCCCCSSHHHHHHHHHHHHHHHHHHHTTTCTTCCEEEEECCTHHHHCCGGGTTTSCCCCSSBCTTSCCCSSCCHHH----
T ss_pred CCCCcchHHHHHHHhHHHHHHHHHHHHHhccccceEEeccCceEEEechhhccccccCCCCCCccccCCccchhhH----
Confidence 431 145567666 899998 789988775421 1000 0 0 11121
Q ss_pred HHHHHHH----hcC-CCEEEEEcCcccCCCCCC--c---------------ceeee-cCC-----CCccccCHHHHHHHH
Q 021854 216 QDESMLM----ASG-IPYTIIRTGVLQNTPGGK--Q---------------GFQFE-EGC-----AANGSLSKEDAAFIC 267 (306)
Q Consensus 216 ~aE~~l~----~sg-i~~tiiRPg~l~~~~~~~--~---------------~~~~~-~g~-----~~~~~Is~~DVA~~i 267 (306)
.+|.+++ +.+ ++++++||+.+....... . +..+. .++ .....++++|+|+++
T Consensus 156 ~~E~~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~v~Dva~a~ 235 (364)
T 2v6g_A 156 DLEDIMLEEVEKKEGLTWSVHRPGNIFGFSPYSMMNLVGTLCVYAAICKHEGKVLRFTGCKAAWDGYSDCSDADLIAEHH 235 (364)
T ss_dssp HHHHHHHHHHTTSTTCEEEEEEESSEECCCTTCSSCHHHHHHHHHHHHHHHTCCBCCCSCHHHHHSCBCCEEHHHHHHHH
T ss_pred HHHHHHHHHhhcCCCceEEEECCCceeCCCCCcccchHHHHHHHHHHHHhcCCceecCCCcccccccCCCCcHHHHHHHH
Confidence 2444443 355 999999999965322111 1 11011 111 113556779999999
Q ss_pred HHHhhCCCCCCcEEEEecCC-cCHHHHHHHHHHHhhhc
Q 021854 268 VEALESIPQTGLIFEVVNGE-EKVSDWKKCFSRLMEKT 304 (306)
Q Consensus 268 v~aL~~~~~~g~~~~v~~g~-~s~~d~~~l~~~l~~~~ 304 (306)
+.+++++...+++|++++++ .++.|+.+++.++.+..
T Consensus 236 ~~~~~~~~~~g~~~ni~~~~~~s~~e~~~~i~~~~g~~ 273 (364)
T 2v6g_A 236 IWAAVDPYAKNEAFNVSNGDVFKWKHFWKVLAEQFGVE 273 (364)
T ss_dssp HHHHHCGGGTTEEEEECCSCCBCHHHHHHHHHHHHTCC
T ss_pred HHHHhCCCCCCceEEecCCCcCCHHHHHHHHHHHhCCC
Confidence 99998876668899999875 68999999998887643
|
| >4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.85 E-value=2.6e-21 Score=189.32 Aligned_cols=199 Identities=17% Similarity=0.161 Sum_probs=144.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchh------------------hhhcCCCceeeeccCCCHHHHHH
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA------------------MESFGTYVESMAGDASNKKFLKT 159 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~------------------~~~~~~~v~~v~~D~~d~~~l~~ 159 (306)
.+++||||||||+||++++++|.+.|++|++++|+..+. ......+++++.+|+.|.+.+.
T Consensus 149 ~~~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~- 227 (508)
T 4f6l_B 149 PLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV- 227 (508)
T ss_dssp CCEEEEESCTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCC-
T ss_pred CCCeEEEECCccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccCC-
Confidence 358999999999999999999999999999999998731 1123468999999999987777
Q ss_pred HhcCccEEEEcCCch-------------------hhhcccccCCCEEEEecCccc--ccCC----------CCc-ccccc
Q 021854 160 ALRGVRSIICPSEGF-------------------ISNAGSLKGVQHVILLSQLSV--YRGS----------GGI-QALMK 207 (306)
Q Consensus 160 ~~~~~d~vi~~~~g~-------------------~~~~a~~~gvkr~V~iSS~~~--~~~~----------~~~-~~~~~ 207 (306)
++.++|+|||+++.. +++++.+ ++++|||+||.++ +... ... .....
T Consensus 228 ~~~~~D~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~-~~~~~v~iSS~~vG~~~~~~~~~~~~~E~~~~~~~~~~ 306 (508)
T 4f6l_B 228 LPENMDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQ-HHARLIYVSTISVGTYFDIDTEDVTFSEADVYKGQLLT 306 (508)
T ss_dssp CSSCCSEEEECCCC--------CCHHHHHHHHHHHHHHHHT-TTCEEEEEEESCTTSEECTTCSCCEECTTCSCSSBCCC
T ss_pred CccCCCEEEECCceecCCCCHHHHhhhHHHHHHHHHHHHHh-CCCcEEEeCChhhccCCccCCcCcccccccccccccCC
Confidence 788999999984311 3455655 7899999999988 1100 000 00011
Q ss_pred hHHHHHHHHHHHHHHh---cCCCEEEEEcCcccCCCCCCc-------------------ceeeec--CCCCccccCHHHH
Q 021854 208 GNARKLAEQDESMLMA---SGIPYTIIRTGVLQNTPGGKQ-------------------GFQFEE--GCAANGSLSKEDA 263 (306)
Q Consensus 208 ~~a~~~~~~aE~~l~~---sgi~~tiiRPg~l~~~~~~~~-------------------~~~~~~--g~~~~~~Is~~DV 263 (306)
..+...|..+|.++++ .|++++|+||+.+........ ...++. ++....+++++|+
T Consensus 307 ~~Y~~sK~~~E~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~~~~v~v~Dv 386 (508)
T 4f6l_B 307 SPYTRSKFYSELKVLEAVNNGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIGVSMAEMPVDFSFVDTT 386 (508)
T ss_dssp SHHHHHHHHHHHHHHHHHHTTCEEEEEEECCEESCSSSCCCCTTCTTCHHHHHHHHHTTCSEEETTGGGSEEECEEHHHH
T ss_pred CcHHHHHHHHHHHHHHHHHcCCCEEEEecceeccCCCCCcccCCcchHHHHHHHHHHHHcCCCCCCccCceEEEEcHHHH
Confidence 2344456677777765 799999999998653322111 011222 3555789999999
Q ss_pred HHHHHHHhhCCCCCCcEEEEecCC-cCHHHHHHHHHH
Q 021854 264 AFICVEALESIPQTGLIFEVVNGE-EKVSDWKKCFSR 299 (306)
Q Consensus 264 A~~iv~aL~~~~~~g~~~~v~~g~-~s~~d~~~l~~~ 299 (306)
|++++.++.++. .+++|+++++. .++.++.+++.+
T Consensus 387 A~ai~~~~~~~~-~~~~~nl~~~~~~s~~el~~~i~~ 422 (508)
T 4f6l_B 387 ARQIVALAQVNT-PQIIYHVLSPNKMPVKSLLECVKR 422 (508)
T ss_dssp HHHHHHHTTBCC-SCSEEEESCSCEEEHHHHHHHHHS
T ss_pred HHHHHHHHhCCC-CCCEEEeCCCCCCCHHHHHHHHHH
Confidence 999999998877 78899999976 578888877764
|
| >1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1 | Back alignment and structure |
|---|
Probab=99.85 E-value=2.9e-20 Score=187.53 Aligned_cols=205 Identities=13% Similarity=0.073 Sum_probs=149.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHC-CCeEEEEecCcchhhhhc-CCCceeeeccCCCHHH-HHHHhcCccEEEEcCCc-
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVK-RTRIKALVKDKRNAMESF-GTYVESMAGDASNKKF-LKTALRGVRSIICPSEG- 173 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~-g~~V~~l~R~~~~~~~~~-~~~v~~v~~D~~d~~~-l~~~~~~~d~vi~~~~g- 173 (306)
++|+|+||||+|+||++++++|+++ |++|++++|+.++..... ..+++++.+|++|.++ ++++++++|+|||+++.
T Consensus 314 ~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~D~Vih~Aa~~ 393 (660)
T 1z7e_A 314 RRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLVAIA 393 (660)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGGGTTCTTEEEEECCTTTCHHHHHHHHHHCSEEEECCCCC
T ss_pred cCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhhhccCCceEEEECCCCCcHHHHHHhhcCCCEEEECceec
Confidence 5689999999999999999999998 899999999887654332 2478999999998664 78889999999998331
Q ss_pred ---------------------hhhhcccccCCCEEEEecCcccccCCCCcc-----------c--ccchHHHHHHHHHHH
Q 021854 174 ---------------------FISNAGSLKGVQHVILLSQLSVYRGSGGIQ-----------A--LMKGNARKLAEQDES 219 (306)
Q Consensus 174 ---------------------~~~~~a~~~gvkr~V~iSS~~~~~~~~~~~-----------~--~~~~~a~~~~~~aE~ 219 (306)
.+.+++.+.+ ++||++||.++|....... + .....+...|..+|.
T Consensus 394 ~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~-~r~V~~SS~~vyg~~~~~~~~E~~~~~~~~p~~~p~~~Y~~sK~~~E~ 472 (660)
T 1z7e_A 394 TPIEYTRNPLRVFELDFEENLRIIRYCVKYR-KRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDR 472 (660)
T ss_dssp CTHHHHHSHHHHHHHHTHHHHHHHHHHHHTT-CEEEEECCGGGGBTCCSSSBCTTTCCEEECCTTCTTHHHHHHHHHHHH
T ss_pred CccccccCHHHHHHhhhHHHHHHHHHHHHhC-CEEEEEecHHHcCCCCCcccCCCccccccCcccCCCCCcHHHHHHHHH
Confidence 0345566677 9999999998875422110 0 000123344666676
Q ss_pred HHH----hcCCCEEEEEcCcccCCCCC----------------------Cccee-eecCCCCccccCHHHHHHHHHHHhh
Q 021854 220 MLM----ASGIPYTIIRTGVLQNTPGG----------------------KQGFQ-FEEGCAANGSLSKEDAAFICVEALE 272 (306)
Q Consensus 220 ~l~----~sgi~~tiiRPg~l~~~~~~----------------------~~~~~-~~~g~~~~~~Is~~DVA~~iv~aL~ 272 (306)
+++ +.+++++++||+++...... +..+. ++.++....+++++|+|++++.+++
T Consensus 473 ~~~~~~~~~gi~~~ilRpg~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~ai~~~l~ 552 (660)
T 1z7e_A 473 VIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRIIE 552 (660)
T ss_dssp HHHHHHHHHCCCEEEEEECSEESTTSSCHHHHTTTCSCHHHHHHHHHHHTCCEEEEGGGCCEEECEEHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEECCCcccCCCccccccccccccchHHHHHHHHHcCCCcEEeCCCCeEEEEEEHHHHHHHHHHHHh
Confidence 664 46999999999996532210 11111 2334455789999999999999998
Q ss_pred CCC--CCCcEEEEecCC--cCHHHHHHHHHHHhhh
Q 021854 273 SIP--QTGLIFEVVNGE--EKVSDWKKCFSRLMEK 303 (306)
Q Consensus 273 ~~~--~~g~~~~v~~g~--~s~~d~~~l~~~l~~~ 303 (306)
.+. ..+++|++++++ .++.|+.+++.++.+.
T Consensus 553 ~~~~~~~g~~~ni~~~~~~~s~~el~~~i~~~~g~ 587 (660)
T 1z7e_A 553 NAGNRCDGEIINIGNPENEASIEELGEMLLASFEK 587 (660)
T ss_dssp CGGGTTTTEEEEECCGGGEEEHHHHHHHHHHHHHH
T ss_pred CccccCCCeEEEECCCCCCcCHHHHHHHHHHHhcC
Confidence 764 467899999874 6899999998887764
|
| >1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=2.5e-20 Score=175.11 Aligned_cols=204 Identities=9% Similarity=-0.021 Sum_probs=143.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcch-----hhhhc------CC-CceeeeccCCCHHHHHHHhcC--
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-----AMESF------GT-YVESMAGDASNKKFLKTALRG-- 163 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~-----~~~~~------~~-~v~~v~~D~~d~~~l~~~~~~-- 163 (306)
|+++||||||+|+||++++++|+++|++|++++|+.++ ..... +. +++++.+|+.|.+++.+++++
T Consensus 27 M~k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~ 106 (381)
T 1n7h_A 27 PRKIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIK 106 (381)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHC
T ss_pred hCCeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhccccccccceEEEECCCCCHHHHHHHHHhcC
Confidence 34799999999999999999999999999999998754 22111 12 688999999999999999986
Q ss_pred ccEEEEcCCch----------------------hhhcccccCCC-----EEEEecCcccccCCCCc----ccc-cchHHH
Q 021854 164 VRSIICPSEGF----------------------ISNAGSLKGVQ-----HVILLSQLSVYRGSGGI----QAL-MKGNAR 211 (306)
Q Consensus 164 ~d~vi~~~~g~----------------------~~~~a~~~gvk-----r~V~iSS~~~~~~~~~~----~~~-~~~~a~ 211 (306)
+|+|||+++.. +.+++.+.+++ +||++||.++|...... ... ....+.
T Consensus 107 ~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~E~~~~~~~~~Y~ 186 (381)
T 1n7h_A 107 PDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPPQSETTPFHPRSPYA 186 (381)
T ss_dssp CSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCSSBCTTSCCCCCSHHH
T ss_pred CCEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhCCccCCccEEEEeCcHHHhCCCCCCCCCCCCCCCCCchH
Confidence 59999984310 33445555655 99999999887632110 000 011233
Q ss_pred HHHHHHHHHHHh----cCCCEEEEEcCcccC-CCCC----------------Cc--ceeeecCCCCccccCHHHHHHHHH
Q 021854 212 KLAEQDESMLMA----SGIPYTIIRTGVLQN-TPGG----------------KQ--GFQFEEGCAANGSLSKEDAAFICV 268 (306)
Q Consensus 212 ~~~~~aE~~l~~----sgi~~tiiRPg~l~~-~~~~----------------~~--~~~~~~g~~~~~~Is~~DVA~~iv 268 (306)
..|..+|.+++. .+++++++|+..... .... +. .+.++.++....+++++|+|++++
T Consensus 187 ~sK~~~E~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~v~v~Dva~a~~ 266 (381)
T 1n7h_A 187 ASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGFAGDYVEAMW 266 (381)
T ss_dssp HHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEECEEHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCcEEEEEeCceeCCCCCCcchhHHHHHHHHHHHcCCCCeEEeCCCCceeeeEEHHHHHHHHH
Confidence 345556665543 489999999876332 1110 11 112334455678999999999999
Q ss_pred HHhhCCCCCCcEEEEecCC-cCHHHHHHHHHHHhhh
Q 021854 269 EALESIPQTGLIFEVVNGE-EKVSDWKKCFSRLMEK 303 (306)
Q Consensus 269 ~aL~~~~~~g~~~~v~~g~-~s~~d~~~l~~~l~~~ 303 (306)
.+++.+. +++|++++++ .++.|+.+++.++.+.
T Consensus 267 ~~~~~~~--~~~~~i~~~~~~s~~e~~~~i~~~~g~ 300 (381)
T 1n7h_A 267 LMLQQEK--PDDYVVATEEGHTVEEFLDVSFGYLGL 300 (381)
T ss_dssp HHHTSSS--CCEEEECCSCEEEHHHHHHHHHHHTTC
T ss_pred HHHhCCC--CCeEEeeCCCCCcHHHHHHHHHHHcCC
Confidence 9998764 4799999876 5899999999887754
|
| >2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=4.8e-20 Score=170.79 Aligned_cols=201 Identities=13% Similarity=0.101 Sum_probs=139.8
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchh----hhhc-CCCceeeeccCCCHHHHHHHhcCccEEEEc
Q 021854 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA----MESF-GTYVESMAGDASNKKFLKTALRGVRSIICP 170 (306)
Q Consensus 96 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~----~~~~-~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~ 170 (306)
...+++||||||+|+||++++++|+++|++|++++|+.... .... ..+++++.+|+.|. ++.++|+|||+
T Consensus 24 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~~~~d~vih~ 98 (343)
T 2b69_A 24 EKDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEP-----LYIEVDQIYHL 98 (343)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGTTCTTEEEEECCTTSC-----CCCCCSEEEEC
T ss_pred ccCCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCccchhhhhhhccCCceEEEeCccCCh-----hhcCCCEEEEC
Confidence 34578999999999999999999999999999999975431 1111 24688999999874 36789999998
Q ss_pred CCch----------------------hhhcccccCCCEEEEecCcccccCCCCc----------cccc-chHHHHHHHHH
Q 021854 171 SEGF----------------------ISNAGSLKGVQHVILLSQLSVYRGSGGI----------QALM-KGNARKLAEQD 217 (306)
Q Consensus 171 ~~g~----------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~----------~~~~-~~~a~~~~~~a 217 (306)
++.. +++++.+.++ +||++||.+++...... .+.. ...+...|..+
T Consensus 99 A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~ 177 (343)
T 2b69_A 99 ASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA-RLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVA 177 (343)
T ss_dssp CSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTC-EEEEEEEGGGGBSCSSSSBCTTCCCBCCSSSTTHHHHHHHHHH
T ss_pred ccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCC-cEEEECcHHHhCCCCCCCCcccccccCCCCCCCCchHHHHHHH
Confidence 4310 3445666776 99999999887532100 0000 11233345556
Q ss_pred HHHHH----hcCCCEEEEEcCcccCCCC----------------CCcce-eeecCCCCccccCHHHHHHHHHHHhhCCCC
Q 021854 218 ESMLM----ASGIPYTIIRTGVLQNTPG----------------GKQGF-QFEEGCAANGSLSKEDAAFICVEALESIPQ 276 (306)
Q Consensus 218 E~~l~----~sgi~~tiiRPg~l~~~~~----------------~~~~~-~~~~g~~~~~~Is~~DVA~~iv~aL~~~~~ 276 (306)
|.+++ +.+++++++||+.+..... .+..+ .++.++....+++++|+|++++.++..+.
T Consensus 178 E~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~- 256 (343)
T 2b69_A 178 ETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNV- 256 (343)
T ss_dssp HHHHHHHHHHHCCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHHHHHHHHHTSSC-
T ss_pred HHHHHHHHHHhCCcEEEEEEcceeCcCCCCCcccHHHHHHHHHHcCCCceEcCCCCeEEeeEeHHHHHHHHHHHHhcCC-
Confidence 66553 4699999999998553211 01112 23344555789999999999999987653
Q ss_pred CCcEEEEecCC-cCHHHHHHHHHHHhhhc
Q 021854 277 TGLIFEVVNGE-EKVSDWKKCFSRLMEKT 304 (306)
Q Consensus 277 ~g~~~~v~~g~-~s~~d~~~l~~~l~~~~ 304 (306)
+++|++++++ .++.|+.+++.++.+..
T Consensus 257 -~~~~~i~~~~~~s~~e~~~~i~~~~g~~ 284 (343)
T 2b69_A 257 -SSPVNLGNPEEHTILEFAQLIKNLVGSG 284 (343)
T ss_dssp -CSCEEESCCCEEEHHHHHHHHHHHHTCC
T ss_pred -CCeEEecCCCCCcHHHHHHHHHHHhCCC
Confidence 6789999876 58999999998887653
|
| >1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.85 E-value=4.6e-20 Score=172.28 Aligned_cols=203 Identities=11% Similarity=-0.008 Sum_probs=141.2
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchh-----hhhc------CCCceeeeccCCCHHHHHHHhcC--cc
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-----MESF------GTYVESMAGDASNKKFLKTALRG--VR 165 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~-----~~~~------~~~v~~v~~D~~d~~~l~~~~~~--~d 165 (306)
+|+|+||||+|+||++++++|+++|++|++++|+.++. .... +.+++++.+|++|.+++.+++++ +|
T Consensus 1 m~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 80 (372)
T 1db3_A 1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPD 80 (372)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCCS
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHhcCCC
Confidence 47899999999999999999999999999999986531 1111 24688999999999999999986 59
Q ss_pred EEEEcCCch----------------------hhhcccccCC---CEEEEecCcccccCCCC--c---ccc-cchHHHHHH
Q 021854 166 SIICPSEGF----------------------ISNAGSLKGV---QHVILLSQLSVYRGSGG--I---QAL-MKGNARKLA 214 (306)
Q Consensus 166 ~vi~~~~g~----------------------~~~~a~~~gv---kr~V~iSS~~~~~~~~~--~---~~~-~~~~a~~~~ 214 (306)
+|||+++.. +.+++.+.++ ++||++||.+++..... . ... ....+...|
T Consensus 81 ~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~SS~~v~g~~~~~~~~E~~~~~~~~~Y~~sK 160 (372)
T 1db3_A 81 EVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAK 160 (372)
T ss_dssp EEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCSSSBCTTSCCCCCSHHHHHH
T ss_pred EEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCChhhhCCCCCCCCCccCCCCCCChHHHHH
Confidence 999984310 3345666777 89999999988754221 0 000 011223345
Q ss_pred HHHHHHHH----hcCCCEEEEEcCcccCC-CC----------------CCc--ceeeecCCCCccccCHHHHHHHHHHHh
Q 021854 215 EQDESMLM----ASGIPYTIIRTGVLQNT-PG----------------GKQ--GFQFEEGCAANGSLSKEDAAFICVEAL 271 (306)
Q Consensus 215 ~~aE~~l~----~sgi~~tiiRPg~l~~~-~~----------------~~~--~~~~~~g~~~~~~Is~~DVA~~iv~aL 271 (306)
..+|.+++ +.+++++++||..+... .. .+. .+.++.++....+++++|+|++++.++
T Consensus 161 ~~~e~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~Dva~a~~~~~ 240 (372)
T 1db3_A 161 LYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQWMML 240 (372)
T ss_dssp HHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEEHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhCCCeEEEEECCccCCCCCCcchhhHHHHHHHHHHcCCCCceeecCCCceeeeeEHHHHHHHHHHHH
Confidence 55565554 35899999998764321 11 011 123344556678999999999999999
Q ss_pred hCCCCCCcEEEEecCC-cCHHHHHHHHHHHhhh
Q 021854 272 ESIPQTGLIFEVVNGE-EKVSDWKKCFSRLMEK 303 (306)
Q Consensus 272 ~~~~~~g~~~~v~~g~-~s~~d~~~l~~~l~~~ 303 (306)
+++. +++|+++++. .++.|+.+++.++.+.
T Consensus 241 ~~~~--~~~~ni~~~~~~s~~e~~~~i~~~~g~ 271 (372)
T 1db3_A 241 QQEQ--PEDFVIATGVQYSVRQFVEMAAAQLGI 271 (372)
T ss_dssp SSSS--CCCEEECCCCCEEHHHHHHHHHHTTTE
T ss_pred hcCC--CceEEEcCCCceeHHHHHHHHHHHhCC
Confidence 8654 4789999876 5899999999887654
|
| >1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=4.5e-20 Score=170.34 Aligned_cols=203 Identities=19% Similarity=0.179 Sum_probs=139.7
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcch----hh---hhcCCCceeeeccCCCHHHHHHHhc--CccEEEEc
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN----AM---ESFGTYVESMAGDASNKKFLKTALR--GVRSIICP 170 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~----~~---~~~~~~v~~v~~D~~d~~~l~~~~~--~~d~vi~~ 170 (306)
|+||||||+|+||++++++|+++|++|+++.|.... .. ...+.+++++.+|++|.+.+.++++ ++|+|||+
T Consensus 1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~D~vih~ 80 (338)
T 1udb_A 1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIHF 80 (338)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHTTCSEEEEC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhhcCCcceEEEccCCCHHHHHHHhhccCCCEEEEC
Confidence 589999999999999999999999999999875322 11 1123468899999999999999887 48999998
Q ss_pred CCch----------------------hhhcccccCCCEEEEecCcccccCCC--------CcccccchHHHHHHHHHHHH
Q 021854 171 SEGF----------------------ISNAGSLKGVQHVILLSQLSVYRGSG--------GIQALMKGNARKLAEQDESM 220 (306)
Q Consensus 171 ~~g~----------------------~~~~a~~~gvkr~V~iSS~~~~~~~~--------~~~~~~~~~a~~~~~~aE~~ 220 (306)
++.. +.+++++.++++||++||.+++.... +..+ ....+...|..+|.+
T Consensus 81 A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~e~~~~~~-~~~~Y~~sK~~~e~~ 159 (338)
T 1udb_A 81 AGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVYGDNPKIPYVESFPTGT-PQSPYGKSKLMVEQI 159 (338)
T ss_dssp CSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCCSSSBCTTSCCCC-CSSHHHHHHHHHHHH
T ss_pred CccCccccchhcHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccHHHhCCCCCCCcCcccCCCC-CCChHHHHHHHHHHH
Confidence 4310 33456677899999999998875321 0000 011233345555665
Q ss_pred HHh----c-CCCEEEEEcCcccCC---------CC----------------CCcceee-e------cCCCCccccCHHHH
Q 021854 221 LMA----S-GIPYTIIRTGVLQNT---------PG----------------GKQGFQF-E------EGCAANGSLSKEDA 263 (306)
Q Consensus 221 l~~----s-gi~~tiiRPg~l~~~---------~~----------------~~~~~~~-~------~g~~~~~~Is~~DV 263 (306)
++. . +++++++||+.+... +. ....+.. + .|.....+|+++|+
T Consensus 160 ~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~Dv 239 (338)
T 1udb_A 160 LTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMDL 239 (338)
T ss_dssp HHHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEECEEEHHHH
T ss_pred HHHHHHhcCCCceEEEeeceecCCCcccccccccccchhhHHHHHHHHHHhcCCCcEEecCcccCCCCceeeeeEEHHHH
Confidence 543 3 799999998763311 10 0111111 1 23334578999999
Q ss_pred HHHHHHHhhCCC-CC-CcEEEEecCC-cCHHHHHHHHHHHhhh
Q 021854 264 AFICVEALESIP-QT-GLIFEVVNGE-EKVSDWKKCFSRLMEK 303 (306)
Q Consensus 264 A~~iv~aL~~~~-~~-g~~~~v~~g~-~s~~d~~~l~~~l~~~ 303 (306)
|++++.+++.+. .. +++|++++++ .++.|+.+++.++.+.
T Consensus 240 a~a~~~~l~~~~~~~~~~~yni~~~~~~s~~e~~~~i~~~~g~ 282 (338)
T 1udb_A 240 ADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGK 282 (338)
T ss_dssp HHHHHHHHHHHTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTS
T ss_pred HHHHHHHHhhhhccCCCcEEEecCCCceeHHHHHHHHHHHhCC
Confidence 999999997532 22 4799999865 5899999999887764
|
| >2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A | Back alignment and structure |
|---|
Probab=99.84 E-value=1.6e-20 Score=165.35 Aligned_cols=180 Identities=13% Similarity=0.132 Sum_probs=133.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCC--eEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcCCch-
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRT--RIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEGF- 174 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~--~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~g~- 174 (306)
++|+|+||||+|+||++++++|+++|+ +|++++|++++.......++.++.+|++|.+++.++++++|+|||+++..
T Consensus 17 ~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~~~ 96 (242)
T 2bka_A 17 QNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKLDDYASAFQGHDVGFCCLGTTR 96 (242)
T ss_dssp TCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGGGCEEEECCGGGGGGGGGGGSSCSEEEECCCCCH
T ss_pred cCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccccCCceEEecCcCCHHHHHHHhcCCCEEEECCCccc
Confidence 468999999999999999999999999 99999999876443223468899999999999999999999999985421
Q ss_pred ------------------hhhcccccCCCEEEEecCcccccCCCCcccccchHHHHHHHHHHHHHHhcCCC-EEEEEcCc
Q 021854 175 ------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMASGIP-YTIIRTGV 235 (306)
Q Consensus 175 ------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~~~~~aE~~l~~sgi~-~tiiRPg~ 235 (306)
+.+++.+.++++||++||.+++.+. ...| ...|..+|.+++..+++ +++||||+
T Consensus 97 ~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~~--~~~Y-----~~sK~~~e~~~~~~~~~~~~~vrpg~ 169 (242)
T 2bka_A 97 GKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADKSS--NFLY-----LQVKGEVEAKVEELKFDRYSVFRPGV 169 (242)
T ss_dssp HHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTTC--SSHH-----HHHHHHHHHHHHTTCCSEEEEEECCE
T ss_pred ccCCcccceeeeHHHHHHHHHHHHHCCCCEEEEEccCcCCCCC--cchH-----HHHHHHHHHHHHhcCCCCeEEEcCce
Confidence 3345667889999999999887532 2233 23466788899999995 99999999
Q ss_pred ccCCCCCCc---ce------eeecCCCCccccCHHHHHHHHHHHhhCCCCCCcEEEEec
Q 021854 236 LQNTPGGKQ---GF------QFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVVN 285 (306)
Q Consensus 236 l~~~~~~~~---~~------~~~~g~~~~~~Is~~DVA~~iv~aL~~~~~~g~~~~v~~ 285 (306)
+........ .+ ..+.......+++++|+|++++.++.++... ..|.+.+
T Consensus 170 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~~~~-~~~~~~~ 227 (242)
T 2bka_A 170 LLCDRQESRPGEWLVRKFFGSLPDSWASGHSVPVVTVVRAMLNNVVRPRDK-QMELLEN 227 (242)
T ss_dssp EECTTGGGSHHHHHHHHHHCSCCTTGGGGTEEEHHHHHHHHHHHHTSCCCS-SEEEEEH
T ss_pred ecCCCCCCcHHHHHHHHhhcccCccccCCcccCHHHHHHHHHHHHhCcccc-CeeEeeH
Confidence 654321100 00 0000001235789999999999999877653 3566653
|
| >1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2 | Back alignment and structure |
|---|
Probab=99.83 E-value=1.5e-19 Score=183.25 Aligned_cols=207 Identities=16% Similarity=0.136 Sum_probs=145.9
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchh-------hhhcCCCceeeeccCCCHHHHHHHhc--CccEE
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-------MESFGTYVESMAGDASNKKFLKTALR--GVRSI 167 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~-------~~~~~~~v~~v~~D~~d~~~l~~~~~--~~d~v 167 (306)
.++|+||||||+|+||++++++|+++|++|++++|..... ......+++++.+|+.|.+.+.++++ ++|+|
T Consensus 9 ~~~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~D~V 88 (699)
T 1z45_A 9 STSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEYKIDSV 88 (699)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHSCCCEE
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHHHHHhhccCCceEEEEcCCCCHHHHHHHHHhCCCCEE
Confidence 3568999999999999999999999999999999976431 11124578899999999999999998 89999
Q ss_pred EEcCCch----------------------hhhcccccCCCEEEEecCcccccCCC------Ccc---cc-cchHHHHHHH
Q 021854 168 ICPSEGF----------------------ISNAGSLKGVQHVILLSQLSVYRGSG------GIQ---AL-MKGNARKLAE 215 (306)
Q Consensus 168 i~~~~g~----------------------~~~~a~~~gvkr~V~iSS~~~~~~~~------~~~---~~-~~~~a~~~~~ 215 (306)
||+++.. +++++++.++++||++||.+++.... +.. .. ....+...|.
T Consensus 89 ih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~iV~~SS~~vyg~~~~~~~~~~~~E~~~~~p~~~Y~~sK~ 168 (699)
T 1z45_A 89 IHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGHTKY 168 (699)
T ss_dssp EECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCCGGGSTTCCSBCTTSCCCCCSHHHHHHH
T ss_pred EECCcccCcCccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECcHHHhCCCccccccCCccccCCCCCCChHHHHHH
Confidence 9984311 34556678899999999998875321 000 00 0112334455
Q ss_pred HHHHHHHh------cCCCEEEEEcCcccCC-CC------------------------CCccee-ee------cCCCCccc
Q 021854 216 QDESMLMA------SGIPYTIIRTGVLQNT-PG------------------------GKQGFQ-FE------EGCAANGS 257 (306)
Q Consensus 216 ~aE~~l~~------sgi~~tiiRPg~l~~~-~~------------------------~~~~~~-~~------~g~~~~~~ 257 (306)
.+|.+++. .+++++++||+.+... +. ....+. ++ .++....+
T Consensus 169 ~~E~~~~~~~~~~~~g~~~~ilR~~~vyG~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~ 248 (699)
T 1z45_A 169 AIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGTPIRDY 248 (699)
T ss_dssp HHHHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC------CCSSCEECE
T ss_pred HHHHHHHHHHHhccCCCcEEEEEeccccCCCcccccccccccchhHHHHHHHHHHhcCCCceEEeCCcccCCCCCeeEee
Confidence 66766653 6899999999874321 10 001111 11 23444678
Q ss_pred cCHHHHHHHHHHHhhCC------CCCCcEEEEecCC-cCHHHHHHHHHHHhhh
Q 021854 258 LSKEDAAFICVEALESI------PQTGLIFEVVNGE-EKVSDWKKCFSRLMEK 303 (306)
Q Consensus 258 Is~~DVA~~iv~aL~~~------~~~g~~~~v~~g~-~s~~d~~~l~~~l~~~ 303 (306)
|+++|||++++.+++.+ ...+++|++++++ .++.|+.+++.++.++
T Consensus 249 i~v~Dva~a~~~a~~~~~~~~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~ 301 (699)
T 1z45_A 249 IHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKASGI 301 (699)
T ss_dssp EEHHHHHHHHHHHHHHHHHSCTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTC
T ss_pred EEHHHHHHHHHHHHhhhhccccccCCceEEEECCCCCCcHHHHHHHHHHHhCC
Confidence 99999999999998642 2235799999876 5899999999887764
|
| >2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=99.83 E-value=2e-19 Score=160.76 Aligned_cols=189 Identities=15% Similarity=0.039 Sum_probs=137.8
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcC--ccEEEEcCCch---
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRG--VRSIICPSEGF--- 174 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~--~d~vi~~~~g~--- 174 (306)
|+|+||||+|+||++++++|+ +|++|++++|+.+.. .+ +.+|++|.+++.+++++ +|+|||+++..
T Consensus 1 m~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~~~-----~~---~~~Dl~~~~~~~~~~~~~~~d~vi~~a~~~~~~ 71 (273)
T 2ggs_A 1 MRTLITGASGQLGIELSRLLS-ERHEVIKVYNSSEIQ-----GG---YKLDLTDFPRLEDFIIKKRPDVIINAAAMTDVD 71 (273)
T ss_dssp CCEEEETTTSHHHHHHHHHHT-TTSCEEEEESSSCCT-----TC---EECCTTSHHHHHHHHHHHCCSEEEECCCCCCHH
T ss_pred CEEEEECCCChhHHHHHHHHh-cCCeEEEecCCCcCC-----CC---ceeccCCHHHHHHHHHhcCCCEEEECCcccChh
Confidence 479999999999999999999 589999999987431 22 78999999999999986 89999984311
Q ss_pred -------------------hhhcccccCCCEEEEecCcccccCCCCcc----c-ccchHHHHHHHHHHHHHHhcCCCEEE
Q 021854 175 -------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQ----A-LMKGNARKLAEQDESMLMASGIPYTI 230 (306)
Q Consensus 175 -------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~~----~-~~~~~a~~~~~~aE~~l~~sgi~~ti 230 (306)
+.+++.+.++ +||++||..++.+..... . .....+...|..+|.+++. +++++
T Consensus 72 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~iv~~SS~~~~~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~--~~~~~ 148 (273)
T 2ggs_A 72 KCEIEKEKAYKINAEAVRHIVRAGKVIDS-YIVHISTDYVFDGEKGNYKEEDIPNPINYYGLSKLLGETFALQ--DDSLI 148 (273)
T ss_dssp HHHHCHHHHHHHHTHHHHHHHHHHHHTTC-EEEEEEEGGGSCSSSCSBCTTSCCCCSSHHHHHHHHHHHHHCC--TTCEE
T ss_pred hhhhCHHHHHHHhHHHHHHHHHHHHHhCC-eEEEEecceeEcCCCCCcCCCCCCCCCCHHHHHHHHHHHHHhC--CCeEE
Confidence 3345566676 999999998876432200 0 0011233456677877766 89999
Q ss_pred EEcCcccCCCC----------CCcceeeecCCCCccccCHHHHHHHHHHHhhCCCCCCcEEEEecCCcCHHHHHHHHHHH
Q 021854 231 IRTGVLQNTPG----------GKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVVNGEEKVSDWKKCFSRL 300 (306)
Q Consensus 231 iRPg~l~~~~~----------~~~~~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~~~g~~~~v~~g~~s~~d~~~l~~~l 300 (306)
|||+.+..... .+..+.. .++ ...+++++|+|++++.+++++. +.+|++++...++.|+.+++.++
T Consensus 149 iR~~~v~G~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~dva~~i~~~~~~~~--~g~~~i~~~~~s~~e~~~~~~~~ 224 (273)
T 2ggs_A 149 IRTSGIFRNKGFPIYVYKTLKEGKTVFA-FKG-YYSPISARKLASAILELLELRK--TGIIHVAGERISRFELALKIKEK 224 (273)
T ss_dssp EEECCCBSSSSHHHHHHHHHHTTCCEEE-ESC-EECCCBHHHHHHHHHHHHHHTC--CEEEECCCCCEEHHHHHHHHHHH
T ss_pred EeccccccccHHHHHHHHHHHcCCCEEe-ecC-CCCceEHHHHHHHHHHHHhcCc--CCeEEECCCcccHHHHHHHHHHH
Confidence 99998663111 1111222 222 5678999999999999998764 45999998445899999999988
Q ss_pred hhhc
Q 021854 301 MEKT 304 (306)
Q Consensus 301 ~~~~ 304 (306)
.+..
T Consensus 225 ~g~~ 228 (273)
T 2ggs_A 225 FNLP 228 (273)
T ss_dssp TTCC
T ss_pred hCCC
Confidence 7654
|
| >2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=3.2e-19 Score=160.34 Aligned_cols=203 Identities=9% Similarity=0.086 Sum_probs=138.6
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhh---hcC--CCceeeeccCCCHHHHHHHhc-------Cc
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFG--TYVESMAGDASNKKFLKTALR-------GV 164 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~---~~~--~~v~~v~~D~~d~~~l~~~~~-------~~ 164 (306)
..+++|+||||+|+||++++++|+++|++|+++.|+.++..+ ..+ .++.++.+|++|.++++++++ ++
T Consensus 14 l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 93 (278)
T 2bgk_A 14 LQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKL 93 (278)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred ccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 457899999999999999999999999999999998765322 122 268899999999999888876 78
Q ss_pred cEEEEcCCch----------------------------hh----hcccccCCCEEEEecCcccccCCC-CcccccchHHH
Q 021854 165 RSIICPSEGF----------------------------IS----NAGSLKGVQHVILLSQLSVYRGSG-GIQALMKGNAR 211 (306)
Q Consensus 165 d~vi~~~~g~----------------------------~~----~~a~~~gvkr~V~iSS~~~~~~~~-~~~~~~~~~a~ 211 (306)
|+|||+++.. +. ..+.+.+.++||++||..++.+.. +...|..+++.
T Consensus 94 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~Y~~sK~a 173 (278)
T 2bgk_A 94 DIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYTATKHA 173 (278)
T ss_dssp CEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCTTSCHHHHHHHHH
T ss_pred CEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCeEEEEeeccccCCCCCCCcchHHHHHH
Confidence 9999984310 01 112335678999999998887654 44556443322
Q ss_pred H--HHHHHHHHHHhcCCCEEEEEcCcccCCCCCCc-c---ee---e--ecCCCCccccCHHHHHHHHHHHhhCC--CCCC
Q 021854 212 K--LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQ-G---FQ---F--EEGCAANGSLSKEDAAFICVEALESI--PQTG 278 (306)
Q Consensus 212 ~--~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~~-~---~~---~--~~g~~~~~~Is~~DVA~~iv~aL~~~--~~~g 278 (306)
. +.+.....+...++++++||||++........ . .. + ........+++++|+|++++.++.++ ...|
T Consensus 174 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G 253 (278)
T 2bgk_A 174 VLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAEDVADAVAYLAGDESKYVSG 253 (278)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTCSSCSCCCCHHHHHHHHHHHHSGGGTTCCS
T ss_pred HHHHHHHHHHHHhhcCcEEEEEEeceecchhhhhhcccchhHHHHhhhcccccccccCCHHHHHHHHHHHcCcccccCCC
Confidence 1 11111112234699999999999653322110 0 00 0 01112245789999999999999754 3458
Q ss_pred cEEEEecCC-cCHHHHHHHHHH
Q 021854 279 LIFEVVNGE-EKVSDWKKCFSR 299 (306)
Q Consensus 279 ~~~~v~~g~-~s~~d~~~l~~~ 299 (306)
+.|++.+|. .++.++.+++.+
T Consensus 254 ~~~~v~gg~~~~~~e~~~~i~~ 275 (278)
T 2bgk_A 254 LNLVIDGGYTRTNPAFPTALKH 275 (278)
T ss_dssp CEEEESTTGGGCCTHHHHHSCS
T ss_pred CEEEECCcccccCCccchhhhh
Confidence 999999876 467777776654
|
| >3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=99.81 E-value=1.1e-19 Score=178.24 Aligned_cols=194 Identities=16% Similarity=0.138 Sum_probs=133.6
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcCCch----
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEGF---- 174 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~g~---- 174 (306)
+|+||||||+|+||++++++|++.|++|++++|+..+. +.+.+|+.+ .+..+++++|+|||+++..
T Consensus 147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~--------~~v~~d~~~--~~~~~l~~~D~Vih~A~~~~~~~ 216 (516)
T 3oh8_A 147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKP--------GKRFWDPLN--PASDLLDGADVLVHLAGEPIFGR 216 (516)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCT--------TCEECCTTS--CCTTTTTTCSEEEECCCC-----
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCc--------cceeecccc--hhHHhcCCCCEEEECCCCccccc
Confidence 68999999999999999999999999999999998653 235677764 3456788999999983310
Q ss_pred -------------------hhhc-ccccCCCEEEEecCcccccCCCCc------ccccchHHHHHHHHHH---HHHHhcC
Q 021854 175 -------------------ISNA-GSLKGVQHVILLSQLSVYRGSGGI------QALMKGNARKLAEQDE---SMLMASG 225 (306)
Q Consensus 175 -------------------~~~~-a~~~gvkr~V~iSS~~~~~~~~~~------~~~~~~~a~~~~~~aE---~~l~~sg 225 (306)
++++ ++..++++||++||.++|...... .......+...+...| .+....+
T Consensus 217 ~~~~~~~~~~~~Nv~gt~~ll~a~a~~~~~~r~V~~SS~~vyg~~~~~~~~~E~~~~~~~~y~~~~~~~E~~~~~~~~~g 296 (516)
T 3oh8_A 217 FNDSHKEAIRESRVLPTKFLAELVAESTQCTTMISASAVGFYGHDRGDEILTEESESGDDFLAEVCRDWEHATAPASDAG 296 (516)
T ss_dssp CCGGGHHHHHHHTHHHHHHHHHHHHHCSSCCEEEEEEEGGGGCSEEEEEEECTTSCCCSSHHHHHHHHHHHTTHHHHHTT
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCcceEecCCCCCCccCCCCCCCcChHHHHHHHHHHHHHHHHhCC
Confidence 2344 566789999999999887621110 0001111222233333 3345689
Q ss_pred CCEEEEEcCcccCCCC-----------CCcceeeecCCCCccccCHHHHHHHHHHHhhCCCCCCcEEEEecCC-cCHHHH
Q 021854 226 IPYTIIRTGVLQNTPG-----------GKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVVNGE-EKVSDW 293 (306)
Q Consensus 226 i~~tiiRPg~l~~~~~-----------~~~~~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~~~g~~~~v~~g~-~s~~d~ 293 (306)
++++++||+.+..... .+....++.++....+|+++|+|++++.+++++.. +.+|+++++. .++.++
T Consensus 297 i~~~ilRp~~v~Gp~~~~~~~~~~~~~~g~~~~~g~g~~~~~~i~v~Dva~ai~~~l~~~~~-~g~~ni~~~~~~s~~el 375 (516)
T 3oh8_A 297 KRVAFIRTGVALSGRGGMLPLLKTLFSTGLGGKFGDGTSWFSWIAIDDLTDIYYRAIVDAQI-SGPINAVAPNPVSNADM 375 (516)
T ss_dssp CEEEEEEECEEEBTTBSHHHHHHHTTC---CCCCTTSCCEECEEEHHHHHHHHHHHHHCTTC-CEEEEESCSCCEEHHHH
T ss_pred CCEEEEEeeEEECCCCChHHHHHHHHHhCCCcccCCCCceEceEeHHHHHHHHHHHHhCccc-CCcEEEECCCCCCHHHH
Confidence 9999999999654321 11122334455557899999999999999988764 4589999865 488898
Q ss_pred HHHHHHHhhh
Q 021854 294 KKCFSRLMEK 303 (306)
Q Consensus 294 ~~l~~~l~~~ 303 (306)
.+.+.++.++
T Consensus 376 ~~~i~~~~g~ 385 (516)
T 3oh8_A 376 TKILATSMHR 385 (516)
T ss_dssp HHHTTC----
T ss_pred HHHHHHHhCC
Confidence 8888776554
|
| >3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=99.81 E-value=1.7e-18 Score=156.45 Aligned_cols=190 Identities=14% Similarity=0.128 Sum_probs=133.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhh---hcCCCceeeeccCCCHHHHHHHhc-------CccEE
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALR-------GVRSI 167 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~---~~~~~v~~v~~D~~d~~~l~~~~~-------~~d~v 167 (306)
++|+|+||||+|+||++++++|+++|++|+++.|+.++..+ ..+.++.++.+|++|.++++++++ ++|++
T Consensus 4 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~l 83 (281)
T 3m1a_A 4 SAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAYPDRAEAISLDVTDGERIDVVAADVLARYGRVDVL 83 (281)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCSEE
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCceEEEeeCCCHHHHHHHHHHHHHhCCCCCEE
Confidence 57899999999999999999999999999999999877443 245678999999999999888776 78999
Q ss_pred EEcCCch------------------------------hhhcccccCCCEEEEecCcccccCCCCcccccchHHHHHH--H
Q 021854 168 ICPSEGF------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLA--E 215 (306)
Q Consensus 168 i~~~~g~------------------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~~~--~ 215 (306)
||+++.. +...+++.+.++||++||..++.+..+...|..+++.... +
T Consensus 84 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~ 163 (281)
T 3m1a_A 84 VNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRERGSGSVVNISSFGGQLSFAGFSAYSATKAALEQLSE 163 (281)
T ss_dssp EECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHHHHHHHHHHHH
T ss_pred EECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEcCccccCCCCCchHHHHHHHHHHHHHH
Confidence 9984410 1122345678899999999988777777777654432211 1
Q ss_pred HHHHHHHhcCCCEEEEEcCcccCCCCCCccee-----------------eecCCCCccccCHHHHHHHHHHHhhCCCCCC
Q 021854 216 QDESMLMASGIPYTIIRTGVLQNTPGGKQGFQ-----------------FEEGCAANGSLSKEDAAFICVEALESIPQTG 278 (306)
Q Consensus 216 ~aE~~l~~sgi~~tiiRPg~l~~~~~~~~~~~-----------------~~~g~~~~~~Is~~DVA~~iv~aL~~~~~~g 278 (306)
.....+...++++++||||++........... +........+.+++|+|++++.+++++.. +
T Consensus 164 ~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~~~~~~~~~~-~ 242 (281)
T 3m1a_A 164 GLADEVAPFGIKVLIVEPGAFRTNLFGKGAAYFSEENPAYAEKVGPTRQLVQGSDGSQPGDPAKAAAAIRLALDTEKT-P 242 (281)
T ss_dssp HHHHHHGGGTEEEEEEEECCBCCTTTCCCCEEECCBCTTTHHHHHHHHHHHHC-----CBCHHHHHHHHHHHHHSSSC-C
T ss_pred HHHHHhhccCcEEEEEecCccccccccccccccCCcchhhHHHhHHHHHHHhhccCCCCCCHHHHHHHHHHHHhCCCC-C
Confidence 11122334799999999998643321111000 00112224468899999999999987654 5
Q ss_pred cEEEEecCCc
Q 021854 279 LIFEVVNGEE 288 (306)
Q Consensus 279 ~~~~v~~g~~ 288 (306)
..|+++++..
T Consensus 243 ~~~~l~s~~~ 252 (281)
T 3m1a_A 243 LRLALGGDAV 252 (281)
T ss_dssp SEEEESHHHH
T ss_pred eEEecCchHH
Confidence 6888887653
|
| >1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.81 E-value=6.6e-19 Score=158.86 Aligned_cols=203 Identities=13% Similarity=0.139 Sum_probs=129.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh---c------CCCceeeeccCCCHHHHHHHhc------
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---F------GTYVESMAGDASNKKFLKTALR------ 162 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~---~------~~~v~~v~~D~~d~~~l~~~~~------ 162 (306)
++++++||||+|+||++++++|+++|++|+++.|+.++..+. . +.++.++.+|++|.++++++++
T Consensus 5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 84 (278)
T 1spx_A 5 AEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKF 84 (278)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHHHc
Confidence 578999999999999999999999999999999998663321 1 2357889999999999888876
Q ss_pred -CccEEEEcCCch------------------------------hhhc----ccccCCCEEEEecCccc-ccCCCCccccc
Q 021854 163 -GVRSIICPSEGF------------------------------ISNA----GSLKGVQHVILLSQLSV-YRGSGGIQALM 206 (306)
Q Consensus 163 -~~d~vi~~~~g~------------------------------~~~~----a~~~gvkr~V~iSS~~~-~~~~~~~~~~~ 206 (306)
++|++||+++.. +.++ +++.+ ++||++||..+ +.+..+...|.
T Consensus 85 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~~Y~ 163 (278)
T 1spx_A 85 GKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK-GEIVNISSIASGLHATPDFPYYS 163 (278)
T ss_dssp SCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTTSSSSCCTTSHHHH
T ss_pred CCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEecccccccCCCCccHHH
Confidence 789999984310 0011 22235 89999999987 66655555665
Q ss_pred chHHHH--HHHHHHHHHHhcCCCEEEEEcCcccCCCCCCc----cee------e---ecCCCCccccCHHHHHHHHHHHh
Q 021854 207 KGNARK--LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQ----GFQ------F---EEGCAANGSLSKEDAAFICVEAL 271 (306)
Q Consensus 207 ~~~a~~--~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~~----~~~------~---~~g~~~~~~Is~~DVA~~iv~aL 271 (306)
.+++.. +.+.....+...++++++||||++........ ... . ........+.+++|+|++++.++
T Consensus 164 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~v~~l~ 243 (278)
T 1spx_A 164 IAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAGVMGQPQDIAEVIAFLA 243 (278)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHHHCTTSSCBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccCccccccccCchhhhhhhHHHHHHHhcCCCcCCCCHHHHHHHHHHHc
Confidence 443321 11222222335799999999999653321110 000 0 00011234689999999999998
Q ss_pred hCCC---CCCcEEEEecCC-cCHHHHHHHHHHHh
Q 021854 272 ESIP---QTGLIFEVVNGE-EKVSDWKKCFSRLM 301 (306)
Q Consensus 272 ~~~~---~~g~~~~v~~g~-~s~~d~~~l~~~l~ 301 (306)
.++. ..|+++++.+|. .++.++.+++.++.
T Consensus 244 s~~~~~~~tG~~~~vdgG~~~~~~~~~~~~~~~~ 277 (278)
T 1spx_A 244 DRKTSSYIIGHQLVVDGGSSLIMGLHCQDFAKLL 277 (278)
T ss_dssp CHHHHTTCCSCEEEESTTGGGC------------
T ss_pred CccccCcccCcEEEECCCcccccCcccccHHHHh
Confidence 7543 458999999875 47788888887653
|
| >1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=9.9e-19 Score=156.71 Aligned_cols=190 Identities=14% Similarity=0.121 Sum_probs=132.3
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhh---hcCCCceeeeccCCCHHHHHHHhc-------CccE
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALR-------GVRS 166 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~---~~~~~v~~v~~D~~d~~~l~~~~~-------~~d~ 166 (306)
..+++++||||+|+||++++++|+++|++|+++.|+.++..+ .....+.++.+|++|.++++++++ ++|+
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~ 84 (260)
T 1nff_A 5 LTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHV 84 (260)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhcCceEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 357899999999999999999999999999999999876432 222357889999999999888877 7899
Q ss_pred EEEcCCch------------------------------hhhcccccCCCEEEEecCcccccCCCCcccccchHHHH--HH
Q 021854 167 IICPSEGF------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK--LA 214 (306)
Q Consensus 167 vi~~~~g~------------------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~--~~ 214 (306)
+||+++.. +...+++.+.++||++||..++.+..+...|..+++.. +.
T Consensus 85 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~ 164 (260)
T 1nff_A 85 LVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGLT 164 (260)
T ss_dssp EEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHH
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEeehhhcCCCCCchhHHHHHHHHHHHH
Confidence 99984310 11223446778999999998887666666665543321 11
Q ss_pred HHHHHHHHhcCCCEEEEEcCcccCCCCCCcceeeecCCCCccccCHHHHHHHHHHHhhCCC--CCCcEEEEecCC
Q 021854 215 EQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVNGE 287 (306)
Q Consensus 215 ~~aE~~l~~sgi~~tiiRPg~l~~~~~~~~~~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~~~v~~g~ 287 (306)
+.....+...++++++||||++...........+. ......+.+++|+|++++.++.++. ..|++|++.+|.
T Consensus 165 ~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~-~~~~~~~~~~~dvA~~v~~l~s~~~~~~~G~~~~v~gG~ 238 (260)
T 1nff_A 165 KSTALELGPSGIRVNSIHPGLVKTPMTDWVPEDIF-QTALGRAAEPVEVSNLVVYLASDESSYSTGAEFVVDGGT 238 (260)
T ss_dssp HHHHHHHGGGTEEEEEEEECCBCSGGGTTSCTTCS-CCSSSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred HHHHHHhCccCcEEEEEEeCCCCCCccccchhhHH-hCccCCCCCHHHHHHHHHHHhCccccCCcCCEEEECCCe
Confidence 11222233479999999999865322110000000 1112346789999999999987543 358899999875
|
| >2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=7.6e-19 Score=155.15 Aligned_cols=191 Identities=13% Similarity=0.116 Sum_probs=131.4
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh-------cCCCceeeeccCCCHHHHHHHhc-------
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------FGTYVESMAGDASNKKFLKTALR------- 162 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~-------~~~~v~~v~~D~~d~~~l~~~~~------- 162 (306)
.++++|+||||+|+||++++++|+++|++|+++.|+.++..+. .+.++.++.+|++|.++++++++
T Consensus 5 ~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 84 (248)
T 2pnf_A 5 LQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNLVD 84 (248)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHSS
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHhcC
Confidence 4578999999999999999999999999999999988653321 34578899999999999988876
Q ss_pred CccEEEEcCCch------------------------------hhhcccccCCCEEEEecCcccccCCCCcccccchHHHH
Q 021854 163 GVRSIICPSEGF------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK 212 (306)
Q Consensus 163 ~~d~vi~~~~g~------------------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~ 212 (306)
++|+|||+++.. ....+.+.+.++||++||..++.+..+...|..+++..
T Consensus 85 ~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~ 164 (248)
T 2pnf_A 85 GIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFTGNVGQVNYSTTKAGL 164 (248)
T ss_dssp CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhcCCCCCCchHHHHHHHH
Confidence 789999984310 11123346788999999987766555555665443321
Q ss_pred --HHHHHHHHHHhcCCCEEEEEcCcccCCCCCC-cce---eeecCCCCccccCHHHHHHHHHHHhhCC--CCCCcEEEEe
Q 021854 213 --LAEQDESMLMASGIPYTIIRTGVLQNTPGGK-QGF---QFEEGCAANGSLSKEDAAFICVEALESI--PQTGLIFEVV 284 (306)
Q Consensus 213 --~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~-~~~---~~~~g~~~~~~Is~~DVA~~iv~aL~~~--~~~g~~~~v~ 284 (306)
+.+.....+...+++++++|||++....... ... .+........+++++|+|++++.++.++ ...|++|++.
T Consensus 165 ~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~ 244 (248)
T 2pnf_A 165 IGFTKSLAKELAPRNVLVNAVAPGFIETDMTAVLSEEIKQKYKEQIPLGRFGSPEEVANVVLFLCSELASYITGEVIHVN 244 (248)
T ss_dssp HHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSCHHHHHHHHHTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred HHHHHHHHHHhcccCeEEEEEEeceecCchhhhccHHHHHHHHhcCCCCCccCHHHHHHHHHHHhCchhhcCCCcEEEeC
Confidence 1111122233468999999999865322110 000 0111112245789999999999999754 3458899998
Q ss_pred cCC
Q 021854 285 NGE 287 (306)
Q Consensus 285 ~g~ 287 (306)
+|.
T Consensus 245 gg~ 247 (248)
T 2pnf_A 245 GGM 247 (248)
T ss_dssp TTC
T ss_pred CCc
Confidence 763
|
| >2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=99.80 E-value=1.2e-18 Score=154.16 Aligned_cols=190 Identities=13% Similarity=0.119 Sum_probs=131.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh-------cCCCceeeeccCCCHHHHHHHhc-------C
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------FGTYVESMAGDASNKKFLKTALR-------G 163 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~-------~~~~v~~v~~D~~d~~~l~~~~~-------~ 163 (306)
++++++||||+|+||++++++|+++|++|+++.|+.++..+. .+.++.++.+|++|.++++++++ +
T Consensus 1 ~~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (250)
T 2cfc_A 1 MSRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFGA 80 (250)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence 368999999999999999999999999999999988653321 13468899999999999888876 7
Q ss_pred ccEEEEcCCc--------h-------------------------hhhcccccCCCEEEEecCcccccCCCCcccccchHH
Q 021854 164 VRSIICPSEG--------F-------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA 210 (306)
Q Consensus 164 ~d~vi~~~~g--------~-------------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a 210 (306)
+|+|||+++. + +...+.+.+.++||++||..++.+..+...|..+++
T Consensus 81 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~ 160 (250)
T 2cfc_A 81 IDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIASVASLVAFPGRSAYTTSKG 160 (250)
T ss_dssp CCEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred CCEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCCCCchhHHHHHH
Confidence 8999998431 1 011123457889999999988776666666654433
Q ss_pred HH--HHHHHHHHHHhcCCCEEEEEcCcccCCCCCC---c-ce--eeecCCCCccccCHHHHHHHHHHHhhCCC--CCCcE
Q 021854 211 RK--LAEQDESMLMASGIPYTIIRTGVLQNTPGGK---Q-GF--QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLI 280 (306)
Q Consensus 211 ~~--~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~---~-~~--~~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~ 280 (306)
.. +.+.....+...++++++||||++....... . .. .+........+.+++|+|++++.++.++. ..|+.
T Consensus 161 a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~ 240 (250)
T 2cfc_A 161 AVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQWRLDQPELRDQVLARIPQKEIGTAAQVADAVMFLAGEDATYVNGAA 240 (250)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTTHHHHTSHHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSTTCTTCCSCE
T ss_pred HHHHHHHHHHHHhcccCeEEEEEEeCcCccCccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhhcccCCE
Confidence 21 1111122233459999999999865432211 0 00 00111222346799999999999997654 35889
Q ss_pred EEEecCC
Q 021854 281 FEVVNGE 287 (306)
Q Consensus 281 ~~v~~g~ 287 (306)
+++.+|.
T Consensus 241 ~~v~gG~ 247 (250)
T 2cfc_A 241 LVMDGAY 247 (250)
T ss_dssp EEESTTG
T ss_pred EEECCce
Confidence 9998764
|
| >2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=99.80 E-value=2.7e-18 Score=153.56 Aligned_cols=191 Identities=14% Similarity=0.141 Sum_probs=132.0
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh---c-----CCCceeeeccCCCHHHHHHHhc------
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---F-----GTYVESMAGDASNKKFLKTALR------ 162 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~---~-----~~~v~~v~~D~~d~~~l~~~~~------ 162 (306)
..+++++||||+|+||++++++|+++|++|+++.|+.++..+. . +.++.++.+|++|.++++++++
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 84 (260)
T 2z1n_A 5 IQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARDLG 84 (260)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHTT
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHHhc
Confidence 3578999999999999999999999999999999998653321 1 2268899999999999988886
Q ss_pred CccEEEEcCCch------------------------------hhhcccccCCCEEEEecCcccccCCCCcccccchHHHH
Q 021854 163 GVRSIICPSEGF------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK 212 (306)
Q Consensus 163 ~~d~vi~~~~g~------------------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~ 212 (306)
++|++||+++.. +...+.+.+.++||++||..++.+..+...|..+++..
T Consensus 85 gid~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~ 164 (260)
T 2z1n_A 85 GADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKGWGRMVYIGSVTLLRPWQDLALSNIMRLPV 164 (260)
T ss_dssp CCSEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHTHHH
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCCCchhHHHHHHH
Confidence 699999984410 11223356788999999999887766666665544321
Q ss_pred --HHHHHHHHHHhcCCCEEEEEcCcccCCCCC----------C-c-c---eeeecCCCCccccCHHHHHHHHHHHhhCC-
Q 021854 213 --LAEQDESMLMASGIPYTIIRTGVLQNTPGG----------K-Q-G---FQFEEGCAANGSLSKEDAAFICVEALESI- 274 (306)
Q Consensus 213 --~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~----------~-~-~---~~~~~g~~~~~~Is~~DVA~~iv~aL~~~- 274 (306)
+.+.....+...++++++|+||++...... . . . ..+........+.+++|+|++++.++.++
T Consensus 165 ~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v~~l~s~~~ 244 (260)
T 2z1n_A 165 IGVVRTLALELAPHGVTVNAVLPSLILTDRVRSLAEERARRSGITVEEALKSMASRIPMGRVGKPEELASVVAFLASEKA 244 (260)
T ss_dssp HHHHHHHHHHHGGGTEEEEEEEECHHHHCCCC-----------------------CCTTSSCCCHHHHHHHHHHHTSGGG
T ss_pred HHHHHHHHHHHhhhCeEEEEEEECCcccchhhhhhhhhhcccCCcHHHHHHHHHhcCCCCCccCHHHHHHHHHHHhCccc
Confidence 222222334456999999999985422111 0 0 0 00111112234568999999999998763
Q ss_pred -CCCCcEEEEecCC
Q 021854 275 -PQTGLIFEVVNGE 287 (306)
Q Consensus 275 -~~~g~~~~v~~g~ 287 (306)
...|+.+++.+|-
T Consensus 245 ~~~tG~~i~vdGG~ 258 (260)
T 2z1n_A 245 SFITGAVIPVDGGA 258 (260)
T ss_dssp TTCCSCEEEESTTT
T ss_pred cCCCCCEEEeCCCc
Confidence 3468899998763
|
| >1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=1.3e-18 Score=154.20 Aligned_cols=192 Identities=11% Similarity=0.079 Sum_probs=133.1
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh------cCCCceeeeccCCCHHHHHHHhc-------C
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------G 163 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~~~-------~ 163 (306)
..+++|+||||+|+||++++++|+++|++|+++.|+.++..+. .+.++.++.+|++|.++++++++ +
T Consensus 9 ~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 88 (255)
T 1fmc_A 9 LDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGK 88 (255)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhcCC
Confidence 4578999999999999999999999999999999998653321 24568889999999999888876 7
Q ss_pred ccEEEEcCCch-------------------------hhhc----ccccCCCEEEEecCcccccCCCCcccccchHHHHH-
Q 021854 164 VRSIICPSEGF-------------------------ISNA----GSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKL- 213 (306)
Q Consensus 164 ~d~vi~~~~g~-------------------------~~~~----a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~~- 213 (306)
+|+|||+++.. +.++ +++.+.++||++||..++.+..+...|..+++...
T Consensus 89 ~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~ 168 (255)
T 1fmc_A 89 VDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASH 168 (255)
T ss_dssp CCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHHHHHHHHH
T ss_pred CCEEEECCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCCCCCcccHHHHHHHHH
Confidence 89999984310 1111 23457889999999988876666666654433211
Q ss_pred -HHHHHHHHHhcCCCEEEEEcCcccCCCC--CCcc-e--eeecCCCCccccCHHHHHHHHHHHhhCCC--CCCcEEEEec
Q 021854 214 -AEQDESMLMASGIPYTIIRTGVLQNTPG--GKQG-F--QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVN 285 (306)
Q Consensus 214 -~~~aE~~l~~sgi~~tiiRPg~l~~~~~--~~~~-~--~~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~~~v~~ 285 (306)
.+.....+...+++++++|||++..... .... . .+..+.....+.+++|+|++++.++.++. ..|++|++.+
T Consensus 169 ~~~~~~~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~g 248 (255)
T 1fmc_A 169 LVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTPIRRLGQPQDIANAALFLCSPAASWVSGQILTVSG 248 (255)
T ss_dssp HHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCCHHHHHHHHHTCSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred HHHHHHHHhhhcCcEEEEEecccCcchhhhhccChHHHHHHHhcCCcccCCCHHHHHHHHHHHhCCccccCCCcEEEECC
Confidence 1111222334689999999998653211 0000 0 01112222457899999999999997543 3588999998
Q ss_pred CCc
Q 021854 286 GEE 288 (306)
Q Consensus 286 g~~ 288 (306)
|..
T Consensus 249 g~~ 251 (255)
T 1fmc_A 249 GGV 251 (255)
T ss_dssp TSC
T ss_pred cee
Confidence 763
|
| >3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=1e-18 Score=156.46 Aligned_cols=191 Identities=13% Similarity=0.108 Sum_probs=132.5
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh---c----CCCceeeeccCCCHHHHHHHhc-------
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---F----GTYVESMAGDASNKKFLKTALR------- 162 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~---~----~~~v~~v~~D~~d~~~l~~~~~------- 162 (306)
..+|+++||||+|+||++++++|+++|++|+++.|+.++..+. . +.++.++.+|++|.++++++++
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 84 (263)
T 3ai3_A 5 ISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSSFG 84 (263)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 3578999999999999999999999999999999998663321 1 4578899999999998888776
Q ss_pred CccEEEEcCCch--------------------------h----hhcccccCCCEEEEecCcccccCCCCcccccchHHHH
Q 021854 163 GVRSIICPSEGF--------------------------I----SNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK 212 (306)
Q Consensus 163 ~~d~vi~~~~g~--------------------------~----~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~ 212 (306)
++|++||+++.. + ...+++.+.++||++||..++.+..+...|..+++..
T Consensus 85 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~ 164 (263)
T 3ai3_A 85 GADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARGGGAIIHNASICAVQPLWYEPIYNVTKAAL 164 (263)
T ss_dssp SCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCCCCcchHHHHHHHH
Confidence 789999984310 0 1112345778999999999887666666665543321
Q ss_pred --HHHHHHHHHHhcCCCEEEEEcCcccCCCCC-------------Ccce--eeecC-CCCccccCHHHHHHHHHHHhhCC
Q 021854 213 --LAEQDESMLMASGIPYTIIRTGVLQNTPGG-------------KQGF--QFEEG-CAANGSLSKEDAAFICVEALESI 274 (306)
Q Consensus 213 --~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~-------------~~~~--~~~~g-~~~~~~Is~~DVA~~iv~aL~~~ 274 (306)
+.+.....+...++++++||||++...... .... .+... .....+.+++|+|++++.++..+
T Consensus 165 ~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~ 244 (263)
T 3ai3_A 165 MMFSKTLATEVIKDNIRVNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADEHAPIKRFASPEELANFFVFLCSER 244 (263)
T ss_dssp HHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHTTTTTCCHHHHHHHHHHHHCTTCSCBCHHHHHHHHHHHTSTT
T ss_pred HHHHHHHHHHhhhcCcEEEEEecCcccCcchhhhhHhhhcccCCcHHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHcCcc
Confidence 112222223347999999999986432100 0000 00001 12235789999999999999765
Q ss_pred C--CCCcEEEEecCC
Q 021854 275 P--QTGLIFEVVNGE 287 (306)
Q Consensus 275 ~--~~g~~~~v~~g~ 287 (306)
. ..|++|++.+|.
T Consensus 245 ~~~~~G~~~~vdgG~ 259 (263)
T 3ai3_A 245 ATYSVGSAYFVDGGM 259 (263)
T ss_dssp CTTCCSCEEEESTTC
T ss_pred ccCCCCcEEEECCCc
Confidence 3 358899998874
|
| >1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=3.5e-18 Score=152.54 Aligned_cols=191 Identities=13% Similarity=0.056 Sum_probs=132.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh---cCCCceeeeccCCCHHHHHHHhc-------CccEE
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALR-------GVRSI 167 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~---~~~~v~~v~~D~~d~~~l~~~~~-------~~d~v 167 (306)
.+|+++||||+|+||++++++|+++|++|+++.|+.++..+. .+.++.++.+|++|.++++++++ ++|++
T Consensus 4 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~l 83 (254)
T 1hdc_A 4 SGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDGL 83 (254)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 478999999999999999999999999999999998764332 23467889999999998888776 78999
Q ss_pred EEcCCch------------------------------hhhcccccCCCEEEEecCcccccCCCCcccccchHHHH--HHH
Q 021854 168 ICPSEGF------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK--LAE 215 (306)
Q Consensus 168 i~~~~g~------------------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~--~~~ 215 (306)
||+++.. +...+++.+.++||++||..++.+..+...|..+++.. +.+
T Consensus 84 v~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~ 163 (254)
T 1hdc_A 84 VNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGVRGLSK 163 (254)
T ss_dssp EECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHH
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCCCCchhHHHHHHHHHHHHH
Confidence 9984310 11223456778999999998887666666665543321 112
Q ss_pred HHHHHHHhcCCCEEEEEcCcccCCCC----CCcceeeecCCCCcccc-CHHHHHHHHHHHhhCCC--CCCcEEEEecCCc
Q 021854 216 QDESMLMASGIPYTIIRTGVLQNTPG----GKQGFQFEEGCAANGSL-SKEDAAFICVEALESIP--QTGLIFEVVNGEE 288 (306)
Q Consensus 216 ~aE~~l~~sgi~~tiiRPg~l~~~~~----~~~~~~~~~g~~~~~~I-s~~DVA~~iv~aL~~~~--~~g~~~~v~~g~~ 288 (306)
.....+...++++++||||++..... ......+........+. +++|+|++++.++.++. ..|+.+.+.+|..
T Consensus 164 ~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~p~~~~~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG~~ 243 (254)
T 1hdc_A 164 LAAVELGTDRIRVNSVHPGMTYTPMTAETGIRQGEGNYPNTPMGRVGNEPGEIAGAVVKLLSDTSSYVTGAELAVDGGWT 243 (254)
T ss_dssp HHHHHHGGGTEEEEEEEECSBCCHHHHHHTCCCSTTSCTTSTTSSCB-CHHHHHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred HHHHHhhhcCeEEEEEecccCcCccccccchhHHHHHHhcCCCCCCCCCHHHHHHHHHHHhCchhcCCCCCEEEECCCcc
Confidence 22222345789999999998642210 00000010111112356 89999999999997643 4689999988753
|
| >1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=8.4e-19 Score=159.74 Aligned_cols=199 Identities=12% Similarity=0.119 Sum_probs=133.3
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh-------cCCCceeeeccCCCHHHHHHHhcC------
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------FGTYVESMAGDASNKKFLKTALRG------ 163 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~-------~~~~v~~v~~D~~d~~~l~~~~~~------ 163 (306)
..+++|+||||+|+||++++++|+++|++|+++.|+.++..+. .+.++.++.+|++|.++++++++.
T Consensus 24 l~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 103 (302)
T 1w6u_A 24 FQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAG 103 (302)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHHHcC
Confidence 4579999999999999999999999999999999998653321 155789999999999988887764
Q ss_pred -ccEEEEcCCch--------------------------hhhc----cc-ccCCCEEEEecCcccccCCCCcccccchHHH
Q 021854 164 -VRSIICPSEGF--------------------------ISNA----GS-LKGVQHVILLSQLSVYRGSGGIQALMKGNAR 211 (306)
Q Consensus 164 -~d~vi~~~~g~--------------------------~~~~----a~-~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~ 211 (306)
+|++||+++.. +..+ +. +.+.++||++||..++.+..+...|..+++.
T Consensus 104 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a 183 (302)
T 1w6u_A 104 HPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSASAKAG 183 (302)
T ss_dssp SCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCTTCHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEcccccccCCCCcchhHHHHHH
Confidence 49999984410 1111 11 3456799999999887766666666544332
Q ss_pred HH--HHHHHHHHHhcCCCEEEEEcCcccCC-CCC---Ccce---eeecCCCCccccCHHHHHHHHHHHhhCCC--CCCcE
Q 021854 212 KL--AEQDESMLMASGIPYTIIRTGVLQNT-PGG---KQGF---QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLI 280 (306)
Q Consensus 212 ~~--~~~aE~~l~~sgi~~tiiRPg~l~~~-~~~---~~~~---~~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~ 280 (306)
.. .+.....+...++++++||||++... ... .... .+........+.+++|+|++++.++..+. ..|++
T Consensus 184 ~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dva~~~~~l~~~~~~~~~G~~ 263 (302)
T 1w6u_A 184 VEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPCGRLGTVEELANLAAFLCSDYASWINGAV 263 (302)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHHHHHHHTTCTTSSCBCHHHHHHHHHHHTSGGGTTCCSCE
T ss_pred HHHHHHHHHHHhhhcCcEEEEEeeccCCCcchhhhcccchhhHHHHHhcCCcCCCCCHHHHHHHHHHHcCCcccccCCCE
Confidence 11 11111223347999999999987532 111 0000 01111222346789999999999987543 36889
Q ss_pred EEEecCCc-CHHHHHH
Q 021854 281 FEVVNGEE-KVSDWKK 295 (306)
Q Consensus 281 ~~v~~g~~-s~~d~~~ 295 (306)
|++.+|.. ++.++.+
T Consensus 264 ~~v~gg~~~~~~~~~~ 279 (302)
T 1w6u_A 264 IKFDGGEEVLISGEFN 279 (302)
T ss_dssp EEESTTHHHHHHSTTG
T ss_pred EEECCCeeeccCCccc
Confidence 99998753 3444433
|
| >2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.79 E-value=2.5e-18 Score=152.59 Aligned_cols=190 Identities=15% Similarity=0.153 Sum_probs=130.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEec-Ccchhhhh------cCCCceeeeccCCCHHHHHHHhc-------C
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVK-DKRNAMES------FGTYVESMAGDASNKKFLKTALR-------G 163 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R-~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~~~-------~ 163 (306)
.+++++||||+|+||++++++|+++|++|+++.| +.++..+. .+.++.++.+|++|.++++++++ +
T Consensus 3 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 82 (246)
T 2uvd_A 3 KGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVFGQ 82 (246)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 4689999999999999999999999999999999 66543221 24568889999999998888776 7
Q ss_pred ccEEEEcCCch------------------------------hhhcccccCCCEEEEecCcccccCCCCcccccchHHHH-
Q 021854 164 VRSIICPSEGF------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK- 212 (306)
Q Consensus 164 ~d~vi~~~~g~------------------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~- 212 (306)
+|++||+++.. +...+++.+.++||++||..+..+..+...|..+++..
T Consensus 83 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~ 162 (246)
T 2uvd_A 83 VDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQRHGRIVNIASVVGVTGNPGQANYVAAKAGVI 162 (246)
T ss_dssp CCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTBHHHHHHHHHHH
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCHHhcCCCCCCchHHHHHHHHH
Confidence 89999984310 11123345778999999998876655666665543321
Q ss_pred -HHHHHHHHHHhcCCCEEEEEcCcccCCCCCC--cce--eeecCCCCccccCHHHHHHHHHHHhhCCC--CCCcEEEEec
Q 021854 213 -LAEQDESMLMASGIPYTIIRTGVLQNTPGGK--QGF--QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVN 285 (306)
Q Consensus 213 -~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~--~~~--~~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~~~v~~ 285 (306)
+.+.....+...++++++|+||++....... ... .+........+++++|+|++++.++.++. ..|+++.+.+
T Consensus 163 ~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~~~~tG~~~~vdg 242 (246)
T 2uvd_A 163 GLTKTSAKELASRNITVNAIAPGFIATDMTDVLDENIKAEMLKLIPAAQFGEAQDIANAVTFFASDQSKYITGQTLNVDG 242 (246)
T ss_dssp HHHHHHHHHHGGGTEEEEEEEECSBGGGCSSCCCTTHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred HHHHHHHHHhhhcCeEEEEEEeccccCcchhhcCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCCCCCEEEECc
Confidence 1122222344579999999999964322111 000 00011122347899999999999997543 4688999987
Q ss_pred CC
Q 021854 286 GE 287 (306)
Q Consensus 286 g~ 287 (306)
|.
T Consensus 243 G~ 244 (246)
T 2uvd_A 243 GM 244 (246)
T ss_dssp TS
T ss_pred Cc
Confidence 64
|
| >4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A | Back alignment and structure |
|---|
Probab=99.78 E-value=2.3e-18 Score=154.02 Aligned_cols=191 Identities=14% Similarity=0.139 Sum_probs=133.5
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhh---hcCCCceeeeccCCCHHHHHHHhc-------CccE
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALR-------GVRS 166 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~---~~~~~v~~v~~D~~d~~~l~~~~~-------~~d~ 166 (306)
..+|+++||||+|+||++++++|+++|++|+++.|+.++..+ ..+..+.++.+|++|.++++++++ ++|+
T Consensus 6 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~ 85 (259)
T 4e6p_A 6 LEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIGPAAYAVQMDVTRQDSIDAAIAATVEHAGGLDI 85 (259)
T ss_dssp TTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHSSSCCE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCceEEEeeCCCHHHHHHHHHHHHHHcCCCCE
Confidence 357899999999999999999999999999999999876432 345578899999999999888876 7899
Q ss_pred EEEcCCch--------------------------hhhc----ccccC-CCEEEEecCcccccCCCCcccccchHHHHH--
Q 021854 167 IICPSEGF--------------------------ISNA----GSLKG-VQHVILLSQLSVYRGSGGIQALMKGNARKL-- 213 (306)
Q Consensus 167 vi~~~~g~--------------------------~~~~----a~~~g-vkr~V~iSS~~~~~~~~~~~~~~~~~a~~~-- 213 (306)
+||+++-. +.++ ..+.+ ..+||++||..++.+......|..+++...
T Consensus 86 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~ 165 (259)
T 4e6p_A 86 LVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRRGEALVAIYCATKAAVISL 165 (259)
T ss_dssp EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHH
T ss_pred EEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhccCCCCChHHHHHHHHHHHH
Confidence 99984410 1111 12223 569999999998877777667765443221
Q ss_pred HHHHHHHHHhcCCCEEEEEcCcccCCCCC--------------Cc-ceeeecCCCCccccCHHHHHHHHHHHhhCCC--C
Q 021854 214 AEQDESMLMASGIPYTIIRTGVLQNTPGG--------------KQ-GFQFEEGCAANGSLSKEDAAFICVEALESIP--Q 276 (306)
Q Consensus 214 ~~~aE~~l~~sgi~~tiiRPg~l~~~~~~--------------~~-~~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~ 276 (306)
.+.....+...+++++.|+||++...... .. ...+........+.+++|+|++++.++.... -
T Consensus 166 ~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v~~L~s~~~~~i 245 (259)
T 4e6p_A 166 TQSAGLDLIKHRINVNAIAPGVVDGEHWDGVDALFARYENRPRGEKKRLVGEAVPFGRMGTAEDLTGMAIFLASAESDYI 245 (259)
T ss_dssp HHHHHHHHGGGTEEEEEEEECCBCSTTHHHHHHHHHHHHTCCTTHHHHHHHHHSTTSSCBCTHHHHHHHHHTTSGGGTTC
T ss_pred HHHHHHHhhhcCCEEEEEEECCCccchhhhhhhhhhhhccCChHHHHHHHhccCCCCCCcCHHHHHHHHHHHhCCccCCC
Confidence 11122223346999999999986533210 00 0001122233457899999999999886543 4
Q ss_pred CCcEEEEecCC
Q 021854 277 TGLIFEVVNGE 287 (306)
Q Consensus 277 ~g~~~~v~~g~ 287 (306)
.|++|+|.+|.
T Consensus 246 tG~~i~vdgG~ 256 (259)
T 4e6p_A 246 VSQTYNVDGGN 256 (259)
T ss_dssp CSCEEEESTTS
T ss_pred CCCEEEECcCh
Confidence 58999999875
|
| >3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.78 E-value=5.4e-18 Score=152.15 Aligned_cols=192 Identities=14% Similarity=0.105 Sum_probs=129.5
Q ss_pred CccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcC-CCceeeeccCCCHHHHHHHhc-------CccE
Q 021854 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG-TYVESMAGDASNKKFLKTALR-------GVRS 166 (306)
Q Consensus 95 ~~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~-~~v~~v~~D~~d~~~l~~~~~-------~~d~ 166 (306)
....+|+++||||+|+||++++++|+++|++|+++.|+.++..+... .++.++.+|++|.++++++++ .+|+
T Consensus 23 m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~ 102 (260)
T 3gem_A 23 MTLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQAGAVALYGDFSCETGIMAFIDLLKTQTSSLRA 102 (260)
T ss_dssp ----CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHHHHTCEEEECCTTSHHHHHHHHHHHHHHCSCCSE
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhcCCeEEECCCCCHHHHHHHHHHHHHhcCCCCE
Confidence 34557899999999999999999999999999999999876433221 258899999999998887775 6799
Q ss_pred EEEcCCch-----------------------------hhhcccccCCCEEEEecCcccccCCCCcccccchHHHHH--HH
Q 021854 167 IICPSEGF-----------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKL--AE 215 (306)
Q Consensus 167 vi~~~~g~-----------------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~~--~~ 215 (306)
+||+++.. ....+.+.+..+||++||..++.+..+...|..+++... .+
T Consensus 103 lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~ 182 (260)
T 3gem_A 103 VVHNASEWLAETPGEEADNFTRMFSVHMLAPYLINLHCEPLLTASEVADIVHISDDVTRKGSSKHIAYCATKAGLESLTL 182 (260)
T ss_dssp EEECCCCCCCCCTTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGTCCSSCHHHHHHHHHHHHHHH
T ss_pred EEECCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCCCCcHhHHHHHHHHHHHHH
Confidence 99984411 011233456789999999998887777777765443221 11
Q ss_pred HHHHHHHhcCCCEEEEEcCcccCCCCCCcce--eeecCCCCccccCHHHHHHHHHHHhhCCCCCCcEEEEecCC
Q 021854 216 QDESMLMASGIPYTIIRTGVLQNTPGGKQGF--QFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVVNGE 287 (306)
Q Consensus 216 ~aE~~l~~sgi~~tiiRPg~l~~~~~~~~~~--~~~~g~~~~~~Is~~DVA~~iv~aL~~~~~~g~~~~v~~g~ 287 (306)
.....+. .+++++.|+||++.......... .+........+.+++|+|++++.++..+...|++++|.+|.
T Consensus 183 ~la~e~~-~~Irvn~v~PG~v~t~~~~~~~~~~~~~~~~p~~r~~~~edva~~v~~L~~~~~itG~~i~vdGG~ 255 (260)
T 3gem_A 183 SFAARFA-PLVKVNGIAPALLMFQPKDDAAYRANALAKSALGIEPGAEVIYQSLRYLLDSTYVTGTTLTVNGGR 255 (260)
T ss_dssp HHHHHHT-TTCEEEEEEECTTCC---------------CCSCCCCCTHHHHHHHHHHHHCSSCCSCEEEESTTT
T ss_pred HHHHHHC-CCCEEEEEeecccccCCCCCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhhCCCCCCCEEEECCCc
Confidence 1111122 36999999999865322111100 01111122335678999999999997666789999999875
|
| >2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=6.8e-18 Score=150.10 Aligned_cols=191 Identities=14% Similarity=0.059 Sum_probs=129.8
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCc-chhhh---hcCCCceeeeccCCCHHHHHHHh-------cCcc
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK-RNAME---SFGTYVESMAGDASNKKFLKTAL-------RGVR 165 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~-~~~~~---~~~~~v~~v~~D~~d~~~l~~~~-------~~~d 165 (306)
..+++++||||+|+||++++++|+++|++|+++.|+. ++..+ ..+.++.++.+|++|.+++++++ .++|
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id 84 (249)
T 2ew8_A 5 LKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCD 84 (249)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHcCCCC
Confidence 3578999999999999999999999999999999998 55432 23457888999999998888775 4789
Q ss_pred EEEEcCCch------------------------------hhhcccccCCCEEEEecCcccccCCCCcccccchHHHH--H
Q 021854 166 SIICPSEGF------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK--L 213 (306)
Q Consensus 166 ~vi~~~~g~------------------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~--~ 213 (306)
++||+++.. +...+++.+.++||++||..++.+..+...|..+++.. +
T Consensus 85 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~ 164 (249)
T 2ew8_A 85 ILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYISTKAANIGF 164 (249)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCSSCHHHHHHHHHHHHH
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCCCCchhHHHHHHHHHHH
Confidence 999984310 11113446778999999999887766666675543321 1
Q ss_pred HHHHHHHHHhcCCCEEEEEcCcccCCCCC-Cc--c--eeeec-CCCCccccCHHHHHHHHHHHhhCC--CCCCcEEEEec
Q 021854 214 AEQDESMLMASGIPYTIIRTGVLQNTPGG-KQ--G--FQFEE-GCAANGSLSKEDAAFICVEALESI--PQTGLIFEVVN 285 (306)
Q Consensus 214 ~~~aE~~l~~sgi~~tiiRPg~l~~~~~~-~~--~--~~~~~-g~~~~~~Is~~DVA~~iv~aL~~~--~~~g~~~~v~~ 285 (306)
.+.....+...++++++|+||++...... .. . ..... ......+.+++|+|++++.++.++ ...|+.+.+.+
T Consensus 165 ~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~dva~~~~~l~s~~~~~~tG~~~~vdG 244 (249)
T 2ew8_A 165 TRALASDLGKDGITVNAIAPSLVRTATTEASALSAMFDVLPNMLQAIPRLQVPLDLTGAAAFLASDDASFITGQTLAVDG 244 (249)
T ss_dssp HHHHHHHHGGGTEEEEEEEECCC------------------CTTSSSCSCCCTHHHHHHHHHHTSGGGTTCCSCEEEESS
T ss_pred HHHHHHHHHhcCcEEEEEecCcCcCccchhccccchhhHHHHhhCccCCCCCHHHHHHHHHHHcCcccCCCCCcEEEECC
Confidence 12222223456999999999986533211 00 0 00000 011234678999999999999754 24688999987
Q ss_pred CC
Q 021854 286 GE 287 (306)
Q Consensus 286 g~ 287 (306)
|.
T Consensus 245 G~ 246 (249)
T 2ew8_A 245 GM 246 (249)
T ss_dssp SC
T ss_pred Cc
Confidence 74
|
| >2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.78 E-value=4.6e-18 Score=154.16 Aligned_cols=192 Identities=16% Similarity=0.162 Sum_probs=130.2
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh------cCCCceeeeccCCCHHHHHHHhc-------
Q 021854 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR------- 162 (306)
Q Consensus 96 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~~~------- 162 (306)
...+++|+||||+|+||++++++|+++|++|+++.|+.++..+. .+.++.++.+|++|.++++++++
T Consensus 41 ~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~ 120 (285)
T 2c07_A 41 CGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHK 120 (285)
T ss_dssp CCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCS
T ss_pred cCCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHHhcC
Confidence 34578999999999999999999999999999998887653321 14468889999999999888774
Q ss_pred CccEEEEcCCch--------------------------hh----hcccccCCCEEEEecCcccccCCCCcccccchHHHH
Q 021854 163 GVRSIICPSEGF--------------------------IS----NAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK 212 (306)
Q Consensus 163 ~~d~vi~~~~g~--------------------------~~----~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~ 212 (306)
++|+|||+++-. +. ..+.+.+.++||++||..++.+..+...|..+++..
T Consensus 121 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asK~a~ 200 (285)
T 2c07_A 121 NVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQANYSSSKAGV 200 (285)
T ss_dssp CCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCCCCCchHHHHHHHH
Confidence 689999984310 01 112345778999999998876665666665443321
Q ss_pred --HHHHHHHHHHhcCCCEEEEEcCcccCCCCCCcc-ee---eecCCCCccccCHHHHHHHHHHHhhCCC--CCCcEEEEe
Q 021854 213 --LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQG-FQ---FEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVV 284 (306)
Q Consensus 213 --~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~~~-~~---~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~~~v~ 284 (306)
+.+.....+...++++++||||++......... .. +........+++++|+|++++.++.++. ..|+.+++.
T Consensus 201 ~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~~~~~~~~~G~~i~v~ 280 (285)
T 2c07_A 201 IGFTKSLAKELASRNITVNAIAPGFISSDMTDKISEQIKKNIISNIPAGRMGTPEEVANLACFLSSDKSGYINGRVFVID 280 (285)
T ss_dssp HHHHHHHHHHHGGGTEEEEEEEECSBCC-----CCHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred HHHHHHHHHHHHHhCcEEEEEEeCcEecCchhhcCHHHHHHHHhhCCCCCCCCHHHHHHHHHHHhCCCcCCCCCCEEEeC
Confidence 112222223346999999999986533211100 00 0011122347899999999999997643 368899998
Q ss_pred cCC
Q 021854 285 NGE 287 (306)
Q Consensus 285 ~g~ 287 (306)
+|.
T Consensus 281 gG~ 283 (285)
T 2c07_A 281 GGL 283 (285)
T ss_dssp TTS
T ss_pred CCc
Confidence 764
|
| >3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.78 E-value=9.6e-18 Score=149.73 Aligned_cols=191 Identities=15% Similarity=0.105 Sum_probs=129.6
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh---cCCCceeeeccCCCHHHHHHHhc-------CccE
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALR-------GVRS 166 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~---~~~~v~~v~~D~~d~~~l~~~~~-------~~d~ 166 (306)
..+|+++||||+|+||++++++|+++|++|+++.|+.++..+. .+.++.++.+|++|.++++++++ .+|+
T Consensus 5 l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~ 84 (257)
T 3tpc_A 5 LKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAELGAAVRFRNADVTNEADATAALAFAKQEFGHVHG 84 (257)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC------------CEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 3579999999999999999999999999999999998764332 34578899999999998888776 7899
Q ss_pred EEEcCCch------------------------------hhhc----ccc------cCCCEEEEecCcccccCCCCccccc
Q 021854 167 IICPSEGF------------------------------ISNA----GSL------KGVQHVILLSQLSVYRGSGGIQALM 206 (306)
Q Consensus 167 vi~~~~g~------------------------------~~~~----a~~------~gvkr~V~iSS~~~~~~~~~~~~~~ 206 (306)
+||+++.. +.++ +.+ .+..+||++||..++.+..+...|.
T Consensus 85 lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~ 164 (257)
T 3tpc_A 85 LVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFDGQIGQAAYA 164 (257)
T ss_dssp EEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCTTCHHHH
T ss_pred EEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhccCCCCCcchH
Confidence 99984310 0111 122 2467899999999887777777776
Q ss_pred chHHHH--HHHHHHHHHHhcCCCEEEEEcCcccCCCCCC----cceeeecCCCC-ccccCHHHHHHHHHHHhhCCCCCCc
Q 021854 207 KGNARK--LAEQDESMLMASGIPYTIIRTGVLQNTPGGK----QGFQFEEGCAA-NGSLSKEDAAFICVEALESIPQTGL 279 (306)
Q Consensus 207 ~~~a~~--~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~----~~~~~~~g~~~-~~~Is~~DVA~~iv~aL~~~~~~g~ 279 (306)
.+++.. +.+.....+...+++++.|+||++....... ....+...... ..+.+++|+|++++.++.++...|+
T Consensus 165 asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~~r~~~~~dva~~v~~l~s~~~itG~ 244 (257)
T 3tpc_A 165 ASKGGVAALTLPAARELARFGIRVVTIAPGIFDTPMMAGMPQDVQDALAASVPFPPRLGRAEEYAALVKHICENTMLNGE 244 (257)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSCC--------------CCSSSSCSCBCHHHHHHHHHHHHHCTTCCSC
T ss_pred HHHHHHHHHHHHHHHHHHHcCeEEEEEEeCCCCChhhccCCHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHcccCCcCCc
Confidence 554322 1122222234579999999999965332111 00011111122 3467899999999999987667799
Q ss_pred EEEEecCC
Q 021854 280 IFEVVNGE 287 (306)
Q Consensus 280 ~~~v~~g~ 287 (306)
++.+.+|-
T Consensus 245 ~i~vdGG~ 252 (257)
T 3tpc_A 245 VIRLDGAL 252 (257)
T ss_dssp EEEESTTC
T ss_pred EEEECCCc
Confidence 99999875
|
| >1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.78 E-value=6.3e-18 Score=151.73 Aligned_cols=191 Identities=13% Similarity=0.126 Sum_probs=132.6
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh------c--CCCceeeeccCCCHHHHHHHhc------
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------F--GTYVESMAGDASNKKFLKTALR------ 162 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~------~--~~~v~~v~~D~~d~~~l~~~~~------ 162 (306)
..+|+++||||+|+||++++++|+++|++|+++.|+.++..+. . +.++.++.+|++|.++++++++
T Consensus 11 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 90 (267)
T 1iy8_A 11 FTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERF 90 (267)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 4579999999999999999999999999999999998663321 1 4578889999999998888775
Q ss_pred -CccEEEEcCC-----ch--------------------------hhhcccccCCCEEEEecCcccccCCCCcccccchHH
Q 021854 163 -GVRSIICPSE-----GF--------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA 210 (306)
Q Consensus 163 -~~d~vi~~~~-----g~--------------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a 210 (306)
++|++||+++ +. +...+++.+.++||++||..++.+..+...|..+++
T Consensus 91 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~ 170 (267)
T 1iy8_A 91 GRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAAAKH 170 (267)
T ss_dssp SCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBCSSBHHHHHHHH
T ss_pred CCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhccCCCCCccHHHHHH
Confidence 6799999843 10 112234467889999999988776666666755433
Q ss_pred HH--HHHHHHHHHHhcCCCEEEEEcCcccCCCCC-------Ccce-----eeecCCCCccccCHHHHHHHHHHHhhCCC-
Q 021854 211 RK--LAEQDESMLMASGIPYTIIRTGVLQNTPGG-------KQGF-----QFEEGCAANGSLSKEDAAFICVEALESIP- 275 (306)
Q Consensus 211 ~~--~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~-------~~~~-----~~~~g~~~~~~Is~~DVA~~iv~aL~~~~- 275 (306)
.. +.+.....+...+|+++.|+||++...... .... .+........+.+++|+|++++.++.++.
T Consensus 171 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dvA~~v~~l~s~~~~ 250 (267)
T 1iy8_A 171 GVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEAPEIAAVVAFLLSDDAS 250 (267)
T ss_dssp HHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTCTTCSCBCHHHHHHHHHHHTSGGGT
T ss_pred HHHHHHHHHHHHHHhcCeEEEEEEeCCCcCcchhccccccChhhhhhHHHHHhccCCCCCCcCHHHHHHHHHHHcCcccc
Confidence 22 112222233457999999999986422100 0000 01111122346799999999999987542
Q ss_pred -CCCcEEEEecCC
Q 021854 276 -QTGLIFEVVNGE 287 (306)
Q Consensus 276 -~~g~~~~v~~g~ 287 (306)
..|+.+.+.+|.
T Consensus 251 ~~tG~~i~vdGG~ 263 (267)
T 1iy8_A 251 YVNATVVPIDGGQ 263 (267)
T ss_dssp TCCSCEEEESTTT
T ss_pred CCCCCEEEECCCc
Confidence 468899998774
|
| >2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.78 E-value=2.9e-18 Score=150.55 Aligned_cols=171 Identities=18% Similarity=0.101 Sum_probs=116.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcC--CCceeeeccCCCHHHHHHHhc-------CccEEE
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG--TYVESMAGDASNKKFLKTALR-------GVRSII 168 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~--~~v~~v~~D~~d~~~l~~~~~-------~~d~vi 168 (306)
++++|+||||+|+||++++++|+++|++|+++.|+.++..+... .++.++.+|++|.++++++++ ++|++|
T Consensus 4 ~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li 83 (234)
T 2ehd_A 4 MKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELEGALPLPGDVREEGDWARAVAAMEEAFGELSALV 83 (234)
T ss_dssp CCCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhhceEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 56899999999999999999999999999999998876433211 268899999999988877765 679999
Q ss_pred EcCCch------------------------------hhhcccccCCCEEEEecCcccccCCCCcccccchHHHH--HHHH
Q 021854 169 CPSEGF------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK--LAEQ 216 (306)
Q Consensus 169 ~~~~g~------------------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~--~~~~ 216 (306)
|+++.. +...+.+.+.++||++||..++.+..+...|..+++.. +.+.
T Consensus 84 ~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~ 163 (234)
T 2ehd_A 84 NNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRGGGTIVNVGSLAGKNPFKGGAAYNASKFGLLGLAGA 163 (234)
T ss_dssp ECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHH
T ss_pred ECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEECCchhcCCCCCCchhhHHHHHHHHHHHH
Confidence 984310 11223456789999999998887666666665443321 1112
Q ss_pred HHHHHHhcCCCEEEEEcCcccCCCCCCcceeeecCCCCccccCHHHHHHHHHHHhhCCC
Q 021854 217 DESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIP 275 (306)
Q Consensus 217 aE~~l~~sgi~~tiiRPg~l~~~~~~~~~~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~ 275 (306)
....+...++++++||||++.......... . ..+++++|+|++++.++.++.
T Consensus 164 la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~-----~--~~~~~~~dvA~~~~~l~~~~~ 215 (234)
T 2ehd_A 164 AMLDLREANVRVVNVLPGSVDTGFAGNTPG-----Q--AWKLKPEDVAQAVLFALEMPG 215 (234)
T ss_dssp HHHHHGGGTEEEEEEECC-----------------------CCHHHHHHHHHHHHHSCC
T ss_pred HHHHHhhcCcEEEEEEeCCCcCCccccccc-----c--cCCCCHHHHHHHHHHHhCCCc
Confidence 222234579999999999865332211100 0 126899999999999998764
|
| >1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A | Back alignment and structure |
|---|
Probab=99.78 E-value=2.9e-18 Score=151.83 Aligned_cols=191 Identities=13% Similarity=0.139 Sum_probs=130.9
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh---cC--CCceeeeccCCCHHHHHHHhc-------Cc
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FG--TYVESMAGDASNKKFLKTALR-------GV 164 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~---~~--~~v~~v~~D~~d~~~l~~~~~-------~~ 164 (306)
..+++|+||||+|+||++++++|+++|++|+++.|+.++..+. .. .++.++.+|++|.++++++++ .+
T Consensus 4 ~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 83 (251)
T 1zk4_A 4 LDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPV 83 (251)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred CCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhccCceEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 3578999999999999999999999999999999988653321 12 468899999999998888776 48
Q ss_pred cEEEEcCCch------------------------------hhhcccccCC-CEEEEecCcccccCCCCcccccchHHHHH
Q 021854 165 RSIICPSEGF------------------------------ISNAGSLKGV-QHVILLSQLSVYRGSGGIQALMKGNARKL 213 (306)
Q Consensus 165 d~vi~~~~g~------------------------------~~~~a~~~gv-kr~V~iSS~~~~~~~~~~~~~~~~~a~~~ 213 (306)
|+|||+++.. +.+.+++.+. ++||++||..++.+..+...|..+++...
T Consensus 84 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~ 163 (251)
T 1zk4_A 84 STLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAVR 163 (251)
T ss_dssp CEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCTTCHHHHHHHHHHH
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCCchhccCCCCCccchHHHHHHH
Confidence 9999984310 1122345566 79999999988876666666755443211
Q ss_pred --HHHHHHHHH--hcCCCEEEEEcCcccCCCC-C-Cccee---eecCCCCccccCHHHHHHHHHHHhhCCC--CCCcEEE
Q 021854 214 --AEQDESMLM--ASGIPYTIIRTGVLQNTPG-G-KQGFQ---FEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFE 282 (306)
Q Consensus 214 --~~~aE~~l~--~sgi~~tiiRPg~l~~~~~-~-~~~~~---~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~~~ 282 (306)
.+.....+. ..++++++||||++..... . ..... +........+++++|+|++++.++.++. ..|+.++
T Consensus 164 ~~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~ 243 (251)
T 1zk4_A 164 IMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPGAEEAMSQRTKTPMGHIGEPNDIAYICVYLASNESKFATGSEFV 243 (251)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTSTTHHHHHTSTTTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred HHHHHHHHHhcccCCCeEEEEEeeCcCcchhhhhcCchhhhHHHhhcCCCCCCcCHHHHHHHHHHHcCcccccccCcEEE
Confidence 111111122 5789999999998642211 0 00000 1011122347899999999999997643 4588999
Q ss_pred EecCC
Q 021854 283 VVNGE 287 (306)
Q Consensus 283 v~~g~ 287 (306)
+.+|.
T Consensus 244 v~gG~ 248 (251)
T 1zk4_A 244 VDGGY 248 (251)
T ss_dssp ESTTG
T ss_pred ECCCc
Confidence 98764
|
| >3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.78 E-value=1.9e-18 Score=153.19 Aligned_cols=193 Identities=13% Similarity=0.112 Sum_probs=133.7
Q ss_pred CccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhh---hcCCCceeeeccCCCHHHHHHHhc---CccEEE
Q 021854 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALR---GVRSII 168 (306)
Q Consensus 95 ~~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~---~~~~~v~~v~~D~~d~~~l~~~~~---~~d~vi 168 (306)
....+++|+||||+|+||++++++|+++|++|+++.|+.++..+ .....+.++.+|++|.+++.++++ ++|++|
T Consensus 10 ~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~li 89 (249)
T 3f9i_A 10 IDLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDNYTIEVCNLANKEECSNLISKTSNLDILV 89 (249)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHTCSCCSEEE
T ss_pred ccCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhccCccEEEcCCCCHHHHHHHHHhcCCCCEEE
Confidence 34568999999999999999999999999999999999876433 345678899999999999998887 579999
Q ss_pred EcCCch--------------------------h----hhcccccCCCEEEEecCcccccCCCCcccccchHHHH--HHHH
Q 021854 169 CPSEGF--------------------------I----SNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK--LAEQ 216 (306)
Q Consensus 169 ~~~~g~--------------------------~----~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~--~~~~ 216 (306)
|+++.. + ...+.+.+.++||++||..++.+..+...|..+++.. +.+.
T Consensus 90 ~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~ 169 (249)
T 3f9i_A 90 CNAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVGIAGNPGQANYCASKAGLIGMTKS 169 (249)
T ss_dssp ECCC-------------CHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCC--CCSCSHHHHHHHHHHHHHHHH
T ss_pred ECCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEccHHhccCCCCCchhHHHHHHHHHHHHH
Confidence 984410 1 1112345677999999999887777766776544321 1121
Q ss_pred HHHHHHhcCCCEEEEEcCcccCCCCCCc-c---eeeecCCCCccccCHHHHHHHHHHHhhCCC--CCCcEEEEecCC
Q 021854 217 DESMLMASGIPYTIIRTGVLQNTPGGKQ-G---FQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVNGE 287 (306)
Q Consensus 217 aE~~l~~sgi~~tiiRPg~l~~~~~~~~-~---~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~~~v~~g~ 287 (306)
....+...+++++.|+||++........ . ..+........+.+++|+|++++.++.++. ..|+.+++.+|.
T Consensus 170 la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~tG~~~~vdgG~ 246 (249)
T 3f9i_A 170 LSYEVATRGITVNAVAPGFIKSDMTDKLNEKQREAIVQKIPLGTYGIPEDVAYAVAFLASNNASYITGQTLHVNGGM 246 (249)
T ss_dssp HHHHHGGGTEEEEEEEECCBC------CCHHHHHHHHHHCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred HHHHHHHcCcEEEEEecCccccCcccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCCccCCccCcEEEECCCE
Confidence 2222335789999999998653321110 0 001112223457789999999999997643 368999998875
|
| >1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.78 E-value=3.4e-18 Score=152.61 Aligned_cols=190 Identities=16% Similarity=0.106 Sum_probs=130.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh------cCCCceeeeccCCCHHHHHHHhc-------Cc
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GV 164 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~~~-------~~ 164 (306)
|+|+++||||+|+||++++++|+++|++|+++.|+.++..+. .+.++.++.+|++|.++++++++ ++
T Consensus 1 m~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i 80 (256)
T 1geg_A 1 MKKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGF 80 (256)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCC
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence 368999999999999999999999999999999988653321 13468889999999999888776 78
Q ss_pred cEEEEcCCch------------------------------hhhcccccC-CCEEEEecCcccccCCCCcccccchHHHH-
Q 021854 165 RSIICPSEGF------------------------------ISNAGSLKG-VQHVILLSQLSVYRGSGGIQALMKGNARK- 212 (306)
Q Consensus 165 d~vi~~~~g~------------------------------~~~~a~~~g-vkr~V~iSS~~~~~~~~~~~~~~~~~a~~- 212 (306)
|++||+++.. ....+.+.+ .++||++||..++.+......|..+++..
T Consensus 81 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~ 160 (256)
T 1geg_A 81 DVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVR 160 (256)
T ss_dssp CEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHHHHHHHHHH
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCCCCchhHHHHHHHHH
Confidence 9999984310 011123345 67999999998877666666665543321
Q ss_pred -HHHHHHHHHHhcCCCEEEEEcCcccCCCCC-------------Ccc--eeeecCCCCccccCHHHHHHHHHHHhhCCC-
Q 021854 213 -LAEQDESMLMASGIPYTIIRTGVLQNTPGG-------------KQG--FQFEEGCAANGSLSKEDAAFICVEALESIP- 275 (306)
Q Consensus 213 -~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~-------------~~~--~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~- 275 (306)
+.+.....+...++++++|+||++...... ... ..+........+.+++|+|++++.++.++.
T Consensus 161 ~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~~~~ 240 (256)
T 1geg_A 161 GLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACVSYLASPDSD 240 (256)
T ss_dssp HHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGGT
T ss_pred HHHHHHHHHHHHcCeEEEEEEECCCccchhhhhhhhccccccCChHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcccc
Confidence 112222223457999999999986432100 000 001111122346899999999999997543
Q ss_pred -CCCcEEEEecCC
Q 021854 276 -QTGLIFEVVNGE 287 (306)
Q Consensus 276 -~~g~~~~v~~g~ 287 (306)
..|+++.+.+|.
T Consensus 241 ~~tG~~i~vdGG~ 253 (256)
T 1geg_A 241 YMTGQSLLIDGGM 253 (256)
T ss_dssp TCCSCEEEESSSS
T ss_pred CCCCCEEEeCCCc
Confidence 468999998774
|
| >3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} | Back alignment and structure |
|---|
Probab=99.78 E-value=4.9e-18 Score=151.12 Aligned_cols=191 Identities=16% Similarity=0.106 Sum_probs=129.1
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh------cCCCceeeeccCCCHHHHHHHhc-------C
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------G 163 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~~~-------~ 163 (306)
..+++|+||||+|+||++++++|+++|++|+++.|+.++..+. .+.++.++.+|++|.++++++++ +
T Consensus 11 l~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 90 (260)
T 3awd_A 11 LDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQEGR 90 (260)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 3478999999999999999999999999999999988653221 24578899999999999888775 6
Q ss_pred ccEEEEcCCc-----h----------------------hhhc----ccccCCCEEEEecCcccccCCCCc--ccccchHH
Q 021854 164 VRSIICPSEG-----F----------------------ISNA----GSLKGVQHVILLSQLSVYRGSGGI--QALMKGNA 210 (306)
Q Consensus 164 ~d~vi~~~~g-----~----------------------~~~~----a~~~gvkr~V~iSS~~~~~~~~~~--~~~~~~~a 210 (306)
+|+|||+++. . +.++ +.+.+.++||++||..++.+.... ..|..+++
T Consensus 91 id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~Y~~sK~ 170 (260)
T 3awd_A 91 VDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIVNRPQQQAAYNASKA 170 (260)
T ss_dssp CCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSSCCHHHHHHHH
T ss_pred CCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEecchhcccCCCCCccccHHHHH
Confidence 8999998431 0 0111 223467899999998877654333 44544322
Q ss_pred HH--HHHHHHHHHHhcCCCEEEEEcCcccCCCCC-Cc---ce--eeecCCCCccccCHHHHHHHHHHHhhCC--CCCCcE
Q 021854 211 RK--LAEQDESMLMASGIPYTIIRTGVLQNTPGG-KQ---GF--QFEEGCAANGSLSKEDAAFICVEALESI--PQTGLI 280 (306)
Q Consensus 211 ~~--~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~-~~---~~--~~~~g~~~~~~Is~~DVA~~iv~aL~~~--~~~g~~ 280 (306)
.. +.+.....+...++++++||||++...... .. .. .+........+++++|+|++++.++..+ ...|+.
T Consensus 171 a~~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~ 250 (260)
T 3awd_A 171 GVHQYIRSLAAEWAPHGIRANAVAPTYIETTLTRFGMEKPELYDAWIAGTPMGRVGQPDEVASVVQFLASDAASLMTGAI 250 (260)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTHHHHTCHHHHHHHHHTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred HHHHHHHHHHHHhhhcCeEEEEEEeeeeccchhhcccCChHHHHHHHhcCCcCCCCCHHHHHHHHHHHhCchhccCCCcE
Confidence 11 111111122337999999999987543221 00 00 0111122245789999999999999753 246889
Q ss_pred EEEecCC
Q 021854 281 FEVVNGE 287 (306)
Q Consensus 281 ~~v~~g~ 287 (306)
|++.+|.
T Consensus 251 ~~v~gg~ 257 (260)
T 3awd_A 251 VNVDAGF 257 (260)
T ss_dssp EEESTTT
T ss_pred EEECCce
Confidence 9998875
|
| >1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.78 E-value=5.9e-18 Score=152.28 Aligned_cols=193 Identities=16% Similarity=0.085 Sum_probs=131.9
Q ss_pred CccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhh-------hcCCCceeeeccCCCHHHHHHHhc-----
Q 021854 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME-------SFGTYVESMAGDASNKKFLKTALR----- 162 (306)
Q Consensus 95 ~~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~-------~~~~~v~~v~~D~~d~~~l~~~~~----- 162 (306)
....+|+++||||+|+||++++++|+++|++|+++.|+.++..+ ..+.++.++.+|++|.++++++++
T Consensus 17 ~~l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 96 (267)
T 1vl8_A 17 FDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEK 96 (267)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 34567999999999999999999999999999999999865322 124568889999999998887775
Q ss_pred --CccEEEEcCCch--------------------------h----hhcccccCCCEEEEecCcc-cccCCCCcccccchH
Q 021854 163 --GVRSIICPSEGF--------------------------I----SNAGSLKGVQHVILLSQLS-VYRGSGGIQALMKGN 209 (306)
Q Consensus 163 --~~d~vi~~~~g~--------------------------~----~~~a~~~gvkr~V~iSS~~-~~~~~~~~~~~~~~~ 209 (306)
++|++||+++-. + ...+++.+.++||++||.. +..+..+...|..++
T Consensus 97 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~Y~asK 176 (267)
T 1vl8_A 97 FGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMPNISAYAASK 176 (267)
T ss_dssp HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCCSSSCHHHHHHH
T ss_pred cCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCcchhccCCCCChhHHHHH
Confidence 689999984310 0 1123456778999999988 655555555665443
Q ss_pred HHH--HHHHHHHHHHhcCCCEEEEEcCcccCCCCCC----cce--eeecCCCCccccCHHHHHHHHHHHhhCCC--CCCc
Q 021854 210 ARK--LAEQDESMLMASGIPYTIIRTGVLQNTPGGK----QGF--QFEEGCAANGSLSKEDAAFICVEALESIP--QTGL 279 (306)
Q Consensus 210 a~~--~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~----~~~--~~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~ 279 (306)
+.. +.+.....+...++++++|+||++....... ... .+........+.+++|+|++++.++.++. ..|+
T Consensus 177 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~s~~~~~itG~ 256 (267)
T 1vl8_A 177 GGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRIPLGRTGVPEDLKGVAVFLASEEAKYVTGQ 256 (267)
T ss_dssp HHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTCHHHHHHHHHTCTTSSCBCGGGGHHHHHHHHSGGGTTCCSC
T ss_pred HHHHHHHHHHHHHhcccCeEEEEEEeccCccccccccccChHHHHHHHhhCCCCCCcCHHHHHHHHHHHcCccccCCcCC
Confidence 321 1122222234469999999999875432110 000 00011122346899999999999997642 4688
Q ss_pred EEEEecCC
Q 021854 280 IFEVVNGE 287 (306)
Q Consensus 280 ~~~v~~g~ 287 (306)
.+.+.+|-
T Consensus 257 ~i~vdGG~ 264 (267)
T 1vl8_A 257 IIFVDGGW 264 (267)
T ss_dssp EEEESTTG
T ss_pred eEEECCCC
Confidence 99988763
|
| >2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=8.6e-18 Score=149.95 Aligned_cols=191 Identities=13% Similarity=0.074 Sum_probs=133.2
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhh---hcCCCceeeeccCCCHHHHHHHhc-------CccE
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALR-------GVRS 166 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~---~~~~~v~~v~~D~~d~~~l~~~~~-------~~d~ 166 (306)
..+++|+||||+|+||++++++|+++|++|+++.|+.++..+ ..+.++.++.+|++|.++++++++ ++|+
T Consensus 10 ~~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~ 89 (265)
T 2o23_A 10 VKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRVDV 89 (265)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCE
Confidence 457899999999999999999999999999999999876432 235578999999999999888876 7899
Q ss_pred EEEcCCc--------------h------------------hhhc----cccc------CCCEEEEecCcccccCCCCccc
Q 021854 167 IICPSEG--------------F------------------ISNA----GSLK------GVQHVILLSQLSVYRGSGGIQA 204 (306)
Q Consensus 167 vi~~~~g--------------~------------------~~~~----a~~~------gvkr~V~iSS~~~~~~~~~~~~ 204 (306)
+||+++. . +.++ +.+. +.++||++||..++.+..+...
T Consensus 90 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~ 169 (265)
T 2o23_A 90 AVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAA 169 (265)
T ss_dssp EEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCTTCHH
T ss_pred EEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeCChhhcCCCCCCch
Confidence 9998431 0 0111 1222 6789999999988776666666
Q ss_pred ccchHHHH--HHHHHHHHHHhcCCCEEEEEcCcccCCCCCC-ccee---eecCCCC-ccccCHHHHHHHHHHHhhCCCCC
Q 021854 205 LMKGNARK--LAEQDESMLMASGIPYTIIRTGVLQNTPGGK-QGFQ---FEEGCAA-NGSLSKEDAAFICVEALESIPQT 277 (306)
Q Consensus 205 ~~~~~a~~--~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~-~~~~---~~~g~~~-~~~Is~~DVA~~iv~aL~~~~~~ 277 (306)
|..+++.. +.+.....+...++++++|+||++....... .... +...... ..+.+++|+|++++.++.++...
T Consensus 170 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~ 249 (265)
T 2o23_A 170 YSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLPEKVCNFLASQVPFPSRLGDPAEYAHLVQAIIENPFLN 249 (265)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC----------CHHHHTCSSSCSCBCHHHHHHHHHHHHHCTTCC
T ss_pred hHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccccCccccccCHHHHHHHHHcCCCcCCCCCHHHHHHHHHHHhhcCccC
Confidence 65543321 1122222334579999999999865332111 0000 0011111 34679999999999999876678
Q ss_pred CcEEEEecCC
Q 021854 278 GLIFEVVNGE 287 (306)
Q Consensus 278 g~~~~v~~g~ 287 (306)
|+++.+.+|.
T Consensus 250 G~~i~vdgG~ 259 (265)
T 2o23_A 250 GEVIRLDGAI 259 (265)
T ss_dssp SCEEEESTTC
T ss_pred ceEEEECCCE
Confidence 8999998774
|
| >2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.78 E-value=4.7e-18 Score=151.57 Aligned_cols=192 Identities=20% Similarity=0.153 Sum_probs=128.1
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh---c---C-------CCceeeeccCCCHHHHHHHhcC
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---F---G-------TYVESMAGDASNKKFLKTALRG 163 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~---~---~-------~~v~~v~~D~~d~~~l~~~~~~ 163 (306)
.++++|+||||+|+||++++++|+++|++|+++.|+.++..+. . + .++.++.+|++|.++++++++.
T Consensus 5 ~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 84 (264)
T 2pd6_A 5 LRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLLEQ 84 (264)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHHHH
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHHHH
Confidence 3578999999999999999999999999999999998764321 1 1 4678999999999988887765
Q ss_pred c--------cEEEEcCCch--------------------------hhhc----ccccC-CCEEEEecCcccccCCCCccc
Q 021854 164 V--------RSIICPSEGF--------------------------ISNA----GSLKG-VQHVILLSQLSVYRGSGGIQA 204 (306)
Q Consensus 164 ~--------d~vi~~~~g~--------------------------~~~~----a~~~g-vkr~V~iSS~~~~~~~~~~~~ 204 (306)
+ |+|||+++.. +.++ +.+.+ .++||++||..++.+..+...
T Consensus 85 ~~~~~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~ 164 (264)
T 2pd6_A 85 VQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGNVGQTN 164 (264)
T ss_dssp HHHHHSSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHCCTTBHH
T ss_pred HHHHhCCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhccCCCCChh
Confidence 3 9999984310 1111 22234 679999999987766666666
Q ss_pred ccchHHHH--HHHHHHHHHHhcCCCEEEEEcCcccCCCCCC-ccee---eecCCCCccccCHHHHHHHHHHHhhCCC--C
Q 021854 205 LMKGNARK--LAEQDESMLMASGIPYTIIRTGVLQNTPGGK-QGFQ---FEEGCAANGSLSKEDAAFICVEALESIP--Q 276 (306)
Q Consensus 205 ~~~~~a~~--~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~-~~~~---~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~ 276 (306)
|..+++.. +.+.....+...++++++||||++....... .... +........+.+++|+|++++.++.++. .
T Consensus 165 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~ 244 (264)
T 2pd6_A 165 YAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQKVPQKVVDKITEMIPMGHLGDPEDVADVVAFLASEDSGYI 244 (264)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSCC----------CTGGGCTTCSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred hHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeecccccchhhcCHHHHHHHHHhCCCCCCCCHHHHHHHHHHHcCCcccCC
Confidence 65443321 1111122233479999999999865332111 0000 0011112346789999999999987543 4
Q ss_pred CCcEEEEecCCc
Q 021854 277 TGLIFEVVNGEE 288 (306)
Q Consensus 277 ~g~~~~v~~g~~ 288 (306)
.|+.+++.+|..
T Consensus 245 ~G~~~~v~gg~~ 256 (264)
T 2pd6_A 245 TGTSVEVTGGLF 256 (264)
T ss_dssp CSCEEEESTTC-
T ss_pred CCCEEEECCCce
Confidence 688999998753
|
| >3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.78 E-value=2.9e-18 Score=153.49 Aligned_cols=191 Identities=12% Similarity=0.070 Sum_probs=131.5
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh---cCCCceeeeccCCCHHHHHHHhc-------CccE
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALR-------GVRS 166 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~---~~~~v~~v~~D~~d~~~l~~~~~-------~~d~ 166 (306)
..+|+++||||+|+||++++++|+++|++|+++.|+.++..+. ...++.++.+|++|.++++++++ ++|+
T Consensus 10 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~iD~ 89 (263)
T 3ak4_A 10 LSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGGFAVEVDVTKRASVDAAMQKAIDALGGFDL 89 (263)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCTTCCEEEECCTTCHHHHHHHHHHHHHHHTCCCE
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHHHHHcCCCCE
Confidence 3578999999999999999999999999999999998764332 22367889999999999888876 7899
Q ss_pred EEEcCCch--------------------------hh----hcccccC-CCEEEEecCcccccCCCCcccccchHHHH--H
Q 021854 167 IICPSEGF--------------------------IS----NAGSLKG-VQHVILLSQLSVYRGSGGIQALMKGNARK--L 213 (306)
Q Consensus 167 vi~~~~g~--------------------------~~----~~a~~~g-vkr~V~iSS~~~~~~~~~~~~~~~~~a~~--~ 213 (306)
+||+++.. +. ..+.+.+ .++||++||..++.+......|..+++.. +
T Consensus 90 lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~ 169 (263)
T 3ak4_A 90 LCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVGAPLLAHYSASKFAVFGW 169 (263)
T ss_dssp EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTCHHHHHHHHHHHHH
T ss_pred EEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEecccccccCCCCchhHHHHHHHHHHH
Confidence 99984310 01 1122344 68999999998877665556665543321 1
Q ss_pred HHHHHHHHHhcCCCEEEEEcCcccCCCCCC-------------cce--eeecCCCCccccCHHHHHHHHHHHhhCCC--C
Q 021854 214 AEQDESMLMASGIPYTIIRTGVLQNTPGGK-------------QGF--QFEEGCAANGSLSKEDAAFICVEALESIP--Q 276 (306)
Q Consensus 214 ~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~-------------~~~--~~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~ 276 (306)
.+.....+...++++++||||++....... ... .+........+.+++|||++++.++.++. .
T Consensus 170 ~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~v~~l~s~~~~~~ 249 (263)
T 3ak4_A 170 TQALAREMAPKNIRVNCVCPGFVKTAMQEREIIWEAELRGMTPEAVRAEYVSLTPLGRIEEPEDVADVVVFLASDAARFM 249 (263)
T ss_dssp HHHHHHHHGGGTCEEEEEEECSBTTHHHHHHHHHHHHHHTSCHHHHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred HHHHHHHHhHcCeEEEEEecccccChhhhhhccccccccccCcHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCC
Confidence 122222233469999999999864321100 000 01111122347899999999999997643 4
Q ss_pred CCcEEEEecCC
Q 021854 277 TGLIFEVVNGE 287 (306)
Q Consensus 277 ~g~~~~v~~g~ 287 (306)
.|++|++.+|.
T Consensus 250 tG~~~~vdgG~ 260 (263)
T 3ak4_A 250 TGQGINVTGGV 260 (263)
T ss_dssp CSCEEEESSSS
T ss_pred CCCEEEECcCE
Confidence 68899998774
|
| >2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=1.7e-18 Score=154.81 Aligned_cols=192 Identities=15% Similarity=0.117 Sum_probs=133.0
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh------cCCCceeeeccCCCHHHHHHHhc-------C
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------G 163 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~~~-------~ 163 (306)
..+|+++||||+|+||++++++|+++|++|+++.|+.++..+. .+..+.++.+|++|.++++++++ +
T Consensus 12 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 91 (260)
T 2zat_A 12 LENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLHGG 91 (260)
T ss_dssp TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 3579999999999999999999999999999999998653321 23468889999999988887765 7
Q ss_pred ccEEEEcCCc-----h----------------------hhh----cccccCCCEEEEecCcccccCCCCcccccchHHHH
Q 021854 164 VRSIICPSEG-----F----------------------ISN----AGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK 212 (306)
Q Consensus 164 ~d~vi~~~~g-----~----------------------~~~----~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~ 212 (306)
+|++||+++. . +.+ .+++.+.++||++||..++.+..+...|..+++..
T Consensus 92 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~ 171 (260)
T 2zat_A 92 VDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHPFPNLGPYNVSKTAL 171 (260)
T ss_dssp CCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTBHHHHHHHHHH
T ss_pred CCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEechhhcCCCCCchhHHHHHHHH
Confidence 8999998431 0 011 12346778999999999887766666675543321
Q ss_pred --HHHHHHHHHHhcCCCEEEEEcCcccCCCCCC---cce---eeecCCCCccccCHHHHHHHHHHHhhCCC--CCCcEEE
Q 021854 213 --LAEQDESMLMASGIPYTIIRTGVLQNTPGGK---QGF---QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFE 282 (306)
Q Consensus 213 --~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~---~~~---~~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~~~ 282 (306)
+.+.....+...++++++|+||++....... ... .+........+.+++|+|++++.++.++. ..|++++
T Consensus 172 ~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~~~ 251 (260)
T 2zat_A 172 LGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQVLWMDKARKEYMKESLRIRRLGNPEDCAGIVSFLCSEDASYITGETVV 251 (260)
T ss_dssp HHHHHHHHHHHGGGTEEEEEEEECSBCSSTTHHHHSSHHHHHHHHHHHTCSSCBCGGGGHHHHHHHTSGGGTTCCSCEEE
T ss_pred HHHHHHHHHHhcccCeEEEEEEECcccCccchhcccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCcccCCccCCEEE
Confidence 1122222233469999999999865432110 000 01011112347899999999999987643 3689999
Q ss_pred EecCCc
Q 021854 283 VVNGEE 288 (306)
Q Consensus 283 v~~g~~ 288 (306)
+.+|..
T Consensus 252 vdgG~~ 257 (260)
T 2zat_A 252 VGGGTA 257 (260)
T ss_dssp ESTTCC
T ss_pred ECCCcc
Confidence 998753
|
| >3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.77 E-value=9.7e-18 Score=152.06 Aligned_cols=192 Identities=14% Similarity=0.059 Sum_probs=132.0
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCc-chhhh-------hcCCCceeeeccCCCHHHHHHHhc-----
Q 021854 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK-RNAME-------SFGTYVESMAGDASNKKFLKTALR----- 162 (306)
Q Consensus 96 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~-~~~~~-------~~~~~v~~v~~D~~d~~~l~~~~~----- 162 (306)
..++|+++||||+|+||++++++|+++|++|+++.|+. +...+ ..+..+.++.+|++|.++++++++
T Consensus 22 ~l~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 101 (281)
T 3v2h_A 22 SMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVADR 101 (281)
T ss_dssp CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHHHH
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 45679999999999999999999999999999999944 33211 114578899999999998888775
Q ss_pred --CccEEEEcCCch--------------------------hhh----cccccCCCEEEEecCcccccCCCCcccccchHH
Q 021854 163 --GVRSIICPSEGF--------------------------ISN----AGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA 210 (306)
Q Consensus 163 --~~d~vi~~~~g~--------------------------~~~----~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a 210 (306)
++|++||+++.. +.+ .+.+.+..+||++||..++.+......|..+++
T Consensus 102 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKa 181 (281)
T 3v2h_A 102 FGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGWGRIINIASAHGLVASPFKSAYVAAKH 181 (281)
T ss_dssp TSSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred CCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCcccccCCCCchHHHHHHH
Confidence 689999984410 111 124566789999999998877766667765443
Q ss_pred HH--HHHHHHHHHHhcCCCEEEEEcCcccCCCCCC--------cc--------eeeecCCCCccccCHHHHHHHHHHHhh
Q 021854 211 RK--LAEQDESMLMASGIPYTIIRTGVLQNTPGGK--------QG--------FQFEEGCAANGSLSKEDAAFICVEALE 272 (306)
Q Consensus 211 ~~--~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~--------~~--------~~~~~g~~~~~~Is~~DVA~~iv~aL~ 272 (306)
.. +.+.....+...+++++.|+||++....... .. ..+..+.....+.+++|+|++++.++.
T Consensus 182 a~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~edvA~~v~~L~s 261 (281)
T 3v2h_A 182 GIMGLTKTVALEVAESGVTVNSICPGYVLTPLVEKQIPDQARTRGITEEQVINEVMLKGQPTKKFITVEQVASLALYLAG 261 (281)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECSBCC----------------------------CCTTCSCBCHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHhhhcCcEEEEEECCCCcCcchhhhcchhhhhcCCCHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHcC
Confidence 22 1122222234568999999999864322100 00 011123333567899999999999997
Q ss_pred CCC--CCCcEEEEecCC
Q 021854 273 SIP--QTGLIFEVVNGE 287 (306)
Q Consensus 273 ~~~--~~g~~~~v~~g~ 287 (306)
+.. ..|+++++.+|-
T Consensus 262 ~~a~~itG~~i~vdGG~ 278 (281)
T 3v2h_A 262 DDAAQITGTHVSMDGGW 278 (281)
T ss_dssp SGGGGCCSCEEEESTTG
T ss_pred CCcCCCCCcEEEECCCc
Confidence 654 468999998774
|
| >2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A | Back alignment and structure |
|---|
Probab=99.77 E-value=1.6e-18 Score=154.56 Aligned_cols=190 Identities=16% Similarity=0.083 Sum_probs=130.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcch-h-hhh--cCCCceeeeccCCCHHHHHHHhc-------CccE
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-A-MES--FGTYVESMAGDASNKKFLKTALR-------GVRS 166 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~-~-~~~--~~~~v~~v~~D~~d~~~l~~~~~-------~~d~ 166 (306)
.+|+++||||+|+||++++++|+++|++|+++.|+.+. . .+. .+.++.++.+|++|.++++++++ ++|+
T Consensus 3 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~ 82 (255)
T 2q2v_A 3 KGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPAPALAEIARHGVKAVHHPADLSDVAQIEALFALAEREFGGVDI 82 (255)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHHHSSCSE
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 46899999999999999999999999999999998752 1 111 23467889999999999988887 7899
Q ss_pred EEEcCCch------------------------------hhhcccccCCCEEEEecCcccccCCCCcccccchHHHH--HH
Q 021854 167 IICPSEGF------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK--LA 214 (306)
Q Consensus 167 vi~~~~g~------------------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~--~~ 214 (306)
+||+++.. +...+++.+.++||++||..++.+..+...|..+++.. +.
T Consensus 83 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~ 162 (255)
T 2q2v_A 83 LVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARNWGRIINIASVHGLVGSTGKAAYVAAKHGVVGLT 162 (255)
T ss_dssp EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHH
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcCchhccCCCCchhHHHHHHHHHHHH
Confidence 99984310 11223456788999999998877666666665543321 11
Q ss_pred HHHHHHHHhcCCCEEEEEcCcccCCCCCC------c----c----eee-ecCCCCccccCHHHHHHHHHHHhhCCC--CC
Q 021854 215 EQDESMLMASGIPYTIIRTGVLQNTPGGK------Q----G----FQF-EEGCAANGSLSKEDAAFICVEALESIP--QT 277 (306)
Q Consensus 215 ~~aE~~l~~sgi~~tiiRPg~l~~~~~~~------~----~----~~~-~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~ 277 (306)
+.....+...++++++|+||++....... . . ..+ ........+++++|+|++++.++.++. ..
T Consensus 163 ~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~~~~t 242 (255)
T 2q2v_A 163 KVVGLETATSNVTCNAICPGWVLTPLVQKQIDDRAANGGDPLQAQHDLLAEKQPSLAFVTPEHLGELVLFLCSEAGSQVR 242 (255)
T ss_dssp HHHHHHTTTSSEEEEEEEESSBCCHHHHHHHHHHHHHTCCHHHHHHHHHTTTCTTCCCBCHHHHHHHHHHHTSGGGTTCC
T ss_pred HHHHHHhcccCcEEEEEeeCCCcCcchhhhcccccccccchHHHHHHHHhccCCCCCCcCHHHHHHHHHHHhCCccCCCC
Confidence 11112223468999999999864321100 0 0 001 112223457899999999999987643 35
Q ss_pred CcEEEEecCC
Q 021854 278 GLIFEVVNGE 287 (306)
Q Consensus 278 g~~~~v~~g~ 287 (306)
|+.|++.+|.
T Consensus 243 G~~~~vdgG~ 252 (255)
T 2q2v_A 243 GAAWNVDGGW 252 (255)
T ss_dssp SCEEEESTTG
T ss_pred CCEEEECCCc
Confidence 8899998764
|
| >1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A | Back alignment and structure |
|---|
Probab=99.77 E-value=5.9e-18 Score=151.38 Aligned_cols=191 Identities=16% Similarity=0.110 Sum_probs=119.2
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh------cCCCceeeeccCCCHHHHHHHh--------c
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTAL--------R 162 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~~--------~ 162 (306)
..+++|+||||+|+||++++++|+++|++|+++.|+.++..+. .+.++.++.+|++|.+++++++ .
T Consensus 12 l~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 91 (266)
T 1xq1_A 12 LKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGG 91 (266)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTT
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence 4578999999999999999999999999999999988653321 1346888999999998888777 5
Q ss_pred CccEEEEcCCch--------------------------hhhcc----cccCCCEEEEecCcccccCCCCcccccchHHHH
Q 021854 163 GVRSIICPSEGF--------------------------ISNAG----SLKGVQHVILLSQLSVYRGSGGIQALMKGNARK 212 (306)
Q Consensus 163 ~~d~vi~~~~g~--------------------------~~~~a----~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~ 212 (306)
++|+|||+++.. +.+++ ++.+.++||++||..++.+......|..+++..
T Consensus 92 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~ 171 (266)
T 1xq1_A 92 KLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSATKGAL 171 (266)
T ss_dssp CCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC----------CCHHHHHHHHH
T ss_pred CCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhccCCCCCchHHHHHHHH
Confidence 689999984310 11222 456789999999998876655555665443321
Q ss_pred --HHHHHHHHHHhcCCCEEEEEcCcccCCCCCCc--c-e--eeecCCCCccccCHHHHHHHHHHHhhCCC--CCCcEEEE
Q 021854 213 --LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQ--G-F--QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEV 283 (306)
Q Consensus 213 --~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~~--~-~--~~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~~~v 283 (306)
+.+.....+...++++++||||++........ . . .+........+.+++|+|++++.++..+. ..|+++++
T Consensus 172 ~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v 251 (266)
T 1xq1_A 172 NQLARNLACEWASDGIRANAVAPAVIATPLAEAVYDDEFKKVVISRKPLGRFGEPEEVSSLVAFLCMPAASYITGQTICV 251 (266)
T ss_dssp HHHHHHHHHHHGGGTCEEEEEECCSCC-------------------------CCGGGGHHHHHHHTSGGGTTCCSCEEEC
T ss_pred HHHHHHHHHHHhHhCcEEEEEeeCCCccchhhhhcCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCccCcEEEE
Confidence 11111122334699999999998653321110 0 0 00011111346789999999999987542 45889999
Q ss_pred ecCC
Q 021854 284 VNGE 287 (306)
Q Consensus 284 ~~g~ 287 (306)
.+|.
T Consensus 252 ~gG~ 255 (266)
T 1xq1_A 252 DGGL 255 (266)
T ss_dssp CCCE
T ss_pred cCCc
Confidence 8874
|
| >3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=9.8e-18 Score=147.92 Aligned_cols=191 Identities=15% Similarity=0.075 Sum_probs=130.8
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhc--CCCceeeeccCCCHHHHHHHhc---CccEEEEcC
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF--GTYVESMAGDASNKKFLKTALR---GVRSIICPS 171 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~--~~~v~~v~~D~~d~~~l~~~~~---~~d~vi~~~ 171 (306)
..+++|+||||+|+||++++++|+++|++|+++.|+.++..+.. -.+++++.+|++|.++++++++ .+|+|||++
T Consensus 5 l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~A 84 (244)
T 3d3w_A 5 LAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALGSVGPVDLLVNNA 84 (244)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCCEEEECC
T ss_pred cCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCCCEEEEeCCCHHHHHHHHHHcCCCCEEEECC
Confidence 45789999999999999999999999999999999987644321 1257788999999999999986 479999984
Q ss_pred Cch--------------------------hhhc----ccccC-CCEEEEecCcccccCCCCcccccchHHHHHH--HHHH
Q 021854 172 EGF--------------------------ISNA----GSLKG-VQHVILLSQLSVYRGSGGIQALMKGNARKLA--EQDE 218 (306)
Q Consensus 172 ~g~--------------------------~~~~----a~~~g-vkr~V~iSS~~~~~~~~~~~~~~~~~a~~~~--~~aE 218 (306)
+.. +.++ +.+.+ .++||++||..++.+..+...|..+++.... +...
T Consensus 85 g~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~la 164 (244)
T 3d3w_A 85 AVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKVMA 164 (244)
T ss_dssp CCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhccCCCCCchHHHHHHHHHHHHHHHH
Confidence 310 0111 22235 6899999999887766666666554332111 1111
Q ss_pred HHHHhcCCCEEEEEcCcccCCCCC----Ccce--eeecCCCCccccCHHHHHHHHHHHhhCCC--CCCcEEEEecCC
Q 021854 219 SMLMASGIPYTIIRTGVLQNTPGG----KQGF--QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVNGE 287 (306)
Q Consensus 219 ~~l~~sgi~~tiiRPg~l~~~~~~----~~~~--~~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~~~v~~g~ 287 (306)
..+...++++++||||++...... .... .+........+++++|+|++++.++.++. ..|++|++.+|.
T Consensus 165 ~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~ 241 (244)
T 3d3w_A 165 LELGPHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPLGKFAEVEHVVNAILFLLSDRSGMTTGSTLPVEGGF 241 (244)
T ss_dssp HHHGGGTEEEEEEEECCBTTTTHHHHSCSTTHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred HHhcccCeEEEEEEeccccccchhhhccChHHHHHHHhhCCCCCCcCHHHHHHHHHHHcCccccCCCCCEEEECCCc
Confidence 112236899999999986533211 0000 01112223457899999999999997542 468899998764
|
| >3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.77 E-value=1e-17 Score=150.24 Aligned_cols=188 Identities=14% Similarity=0.133 Sum_probs=129.1
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhc-------CccEEEE
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR-------GVRSIIC 169 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~-------~~d~vi~ 169 (306)
.++|+|+||||+|+||++++++|+++|++|+++.|+.++.. ...+.++.+|++|.++++++++ ++|++||
T Consensus 26 ~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~ 102 (260)
T 3un1_A 26 NQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSA---DPDIHTVAGDISKPETADRIVREGIERFGRIDSLVN 102 (260)
T ss_dssp TTCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCS---STTEEEEESCTTSHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhcc---cCceEEEEccCCCHHHHHHHHHHHHHHCCCCCEEEE
Confidence 45789999999999999999999999999999999886543 2368899999999999888776 7899999
Q ss_pred cCCch--------------------------hhhc----ccccCCCEEEEecCcccccCCC--CcccccchHHHH--HHH
Q 021854 170 PSEGF--------------------------ISNA----GSLKGVQHVILLSQLSVYRGSG--GIQALMKGNARK--LAE 215 (306)
Q Consensus 170 ~~~g~--------------------------~~~~----a~~~gvkr~V~iSS~~~~~~~~--~~~~~~~~~a~~--~~~ 215 (306)
+++-. +.++ +.+.+.+++|++||..++.+.. +...|..+++.. +.+
T Consensus 103 nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~~Y~~sKaa~~~l~~ 182 (260)
T 3un1_A 103 NAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQGSGHIVSITTSLVDQPMVGMPSALASLTKGGLNAVTR 182 (260)
T ss_dssp CCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCTTTTSCBTTCCCHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechhhccCCCCCccHHHHHHHHHHHHHHH
Confidence 84310 1111 2456778999999987764332 223443322211 111
Q ss_pred HHHHHHHhcCCCEEEEEcCcccCCCCCCcc-eeeecCCCCccccCHHHHHHHHHHHhhCCCCCCcEEEEecCC
Q 021854 216 QDESMLMASGIPYTIIRTGVLQNTPGGKQG-FQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVVNGE 287 (306)
Q Consensus 216 ~aE~~l~~sgi~~tiiRPg~l~~~~~~~~~-~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~~~g~~~~v~~g~ 287 (306)
.....+...||+++.|+||++......... ..+........+.+++|||++++.+.......|+++++.+|.
T Consensus 183 ~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~p~~r~~~~~dva~av~~L~~~~~itG~~i~vdGG~ 255 (260)
T 3un1_A 183 SLAMEFSRSGVRVNAVSPGVIKTPMHPAETHSTLAGLHPVGRMGEIRDVVDAVLYLEHAGFITGEILHVDGGQ 255 (260)
T ss_dssp HHHHHTTTTTEEEEEEEECCBCCTTSCGGGHHHHHTTSTTSSCBCHHHHHHHHHHHHHCTTCCSCEEEESTTG
T ss_pred HHHHHhCcCCeEEEEEeecCCCCCCCCHHHHHHHhccCCCCCCcCHHHHHHHHHHhcccCCCCCcEEEECCCe
Confidence 111112235899999999986543321111 111122233456789999999999966566679999998875
|
| >2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.77 E-value=1.8e-17 Score=147.39 Aligned_cols=187 Identities=11% Similarity=0.076 Sum_probs=124.8
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhc-------CccEEEE
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR-------GVRSIIC 169 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~-------~~d~vi~ 169 (306)
.++|+++||||+|+||++++++|+++|++|+++.|+.+... . ++.++.+|++|.++++++++ ++|++||
T Consensus 5 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~--~--~~~~~~~D~~d~~~~~~~~~~~~~~~g~id~lv~ 80 (250)
T 2fwm_X 5 FSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQEQ--Y--PFATEVMDVADAAQVAQVCQRLLAETERLDALVN 80 (250)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCSSC--C--SSEEEECCTTCHHHHHHHHHHHHHHCSCCCEEEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhhhc--C--CceEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 35789999999999999999999999999999999875311 1 37889999999999888876 7899999
Q ss_pred cCCch--------------------------hhhc----ccccCCCEEEEecCcccccCCCCcccccchHHHH--HHHHH
Q 021854 170 PSEGF--------------------------ISNA----GSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK--LAEQD 217 (306)
Q Consensus 170 ~~~g~--------------------------~~~~----a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~--~~~~a 217 (306)
+++.. +.++ +++.+.++||++||..++.+..+...|..+++.. +.+..
T Consensus 81 ~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~l 160 (250)
T 2fwm_X 81 AAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAHTPRIGMSAYGASKAALKSLALSV 160 (250)
T ss_dssp CCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHH
T ss_pred CCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCCCCCchHHHHHHHHHHHHHHH
Confidence 84310 1111 2445788999999998887666666665543321 11222
Q ss_pred HHHHHhcCCCEEEEEcCcccCCCCCC----cc--e-eeec-------CCCCccccCHHHHHHHHHHHhhCCC--CCCcEE
Q 021854 218 ESMLMASGIPYTIIRTGVLQNTPGGK----QG--F-QFEE-------GCAANGSLSKEDAAFICVEALESIP--QTGLIF 281 (306)
Q Consensus 218 E~~l~~sgi~~tiiRPg~l~~~~~~~----~~--~-~~~~-------g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~~ 281 (306)
...+...++++++|+||++....... .. . .+.. ......+.+++|+|++++.++.++. ..|+.+
T Consensus 161 a~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~s~~~~~~tG~~i 240 (250)
T 2fwm_X 161 GLELAGSGVRCNVVSPGSTDTDMQRTLWVSDDAEEQRIRGFGEQFKLGIPLGKIARPQEIANTILFLASDLASHITLQDI 240 (250)
T ss_dssp HHHHGGGTCEEEEEEECCC------------------------------------CHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred HHHhCccCCEEEEEECCcccCccccccccChhHHHHHHhhhhhcccccCCCCCCcCHHHHHHHHHHHhCccccCCCCCEE
Confidence 22234569999999999864322110 00 0 0100 1112346789999999999997643 468999
Q ss_pred EEecCC
Q 021854 282 EVVNGE 287 (306)
Q Consensus 282 ~v~~g~ 287 (306)
.+.+|.
T Consensus 241 ~vdGG~ 246 (250)
T 2fwm_X 241 VVDGGS 246 (250)
T ss_dssp EESTTT
T ss_pred EECCCc
Confidence 998774
|
| >3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=99.77 E-value=1.5e-17 Score=148.74 Aligned_cols=191 Identities=15% Similarity=0.143 Sum_probs=133.2
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh------cCCCceeeeccCCCHHHHHHHhc-------C
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------G 163 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~~~-------~ 163 (306)
..+|+++||||+|+||++++++|+++|++|+++.|+.++..+. .+.++.++.+|++|.++++++++ +
T Consensus 4 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 83 (257)
T 3imf_A 4 MKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKFGR 83 (257)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 3579999999999999999999999999999999998764321 23478899999999988887775 6
Q ss_pred ccEEEEcCCch--------------------------hhhc----c-cccCCCEEEEecCcccccCCCCcccccchHHHH
Q 021854 164 VRSIICPSEGF--------------------------ISNA----G-SLKGVQHVILLSQLSVYRGSGGIQALMKGNARK 212 (306)
Q Consensus 164 ~d~vi~~~~g~--------------------------~~~~----a-~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~ 212 (306)
+|++||+++.. +.++ + ++.+..+||++||..++.+..+...|..+++..
T Consensus 84 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~ 163 (257)
T 3imf_A 84 IDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAWDAGPGVIHSAAAKAGV 163 (257)
T ss_dssp CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGGSCCTTCHHHHHHHHHH
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhhccCCCCcHHHHHHHHHH
Confidence 79999984410 1111 1 334578999999999887776666776544322
Q ss_pred --HHHHHHHHHH-hcCCCEEEEEcCcccCCCCCCcc-----e--eeecCCCCccccCHHHHHHHHHHHhhCCC--CCCcE
Q 021854 213 --LAEQDESMLM-ASGIPYTIIRTGVLQNTPGGKQG-----F--QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLI 280 (306)
Q Consensus 213 --~~~~aE~~l~-~sgi~~tiiRPg~l~~~~~~~~~-----~--~~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~ 280 (306)
+.+.....+. ..+|+++.|+||++......... . .+........+.+++|+|++++.++.+.. ..|++
T Consensus 164 ~~l~~~la~e~~~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~itG~~ 243 (257)
T 3imf_A 164 LAMTKTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWISEEMAKRTIQSVPLGRLGTPEEIAGLAYYLCSDEAAYINGTC 243 (257)
T ss_dssp HHHHHHHHHHHHHHHCCEEEEEEECCBSSCCCC-------CCSHHHHTTSTTCSCBCHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred HHHHHHHHHHhccccCeEEEEEEECCCcCCcchhhcccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCccCCE
Confidence 1122212232 56999999999986533211100 0 00111122346789999999999997643 46899
Q ss_pred EEEecCC
Q 021854 281 FEVVNGE 287 (306)
Q Consensus 281 ~~v~~g~ 287 (306)
+.+.+|.
T Consensus 244 i~vdGG~ 250 (257)
T 3imf_A 244 MTMDGGQ 250 (257)
T ss_dssp EEESTTT
T ss_pred EEECCCc
Confidence 9999875
|
| >1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=8e-18 Score=150.49 Aligned_cols=190 Identities=15% Similarity=0.061 Sum_probs=129.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcch-hhhh---c----CCCceeeeccCCCHHHHHHHhc-------
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-AMES---F----GTYVESMAGDASNKKFLKTALR------- 162 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~-~~~~---~----~~~v~~v~~D~~d~~~l~~~~~------- 162 (306)
.+|+++||||+|+||++++++|+++|++|+++.|+.++ ..+. . +.++.++.+|++|.++++++++
T Consensus 3 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 82 (260)
T 1x1t_A 3 KGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMG 82 (260)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence 46899999999999999999999999999999998765 3321 1 4568889999999998887775
Q ss_pred CccEEEEcCCch--------------------------h----hhcccccCCCEEEEecCcccccCCCCcccccchHHHH
Q 021854 163 GVRSIICPSEGF--------------------------I----SNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK 212 (306)
Q Consensus 163 ~~d~vi~~~~g~--------------------------~----~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~ 212 (306)
++|++||+++-. + ...+++.+.++||++||..++.+..+...|..+++..
T Consensus 83 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~ 162 (260)
T 1x1t_A 83 RIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGV 162 (260)
T ss_dssp CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECcHHhCcCCCCCchHHHHHHHH
Confidence 689999984310 0 1112345678999999998877666666665543321
Q ss_pred --HHHHHHHHHHhcCCCEEEEEcCcccCCCCCCc-------------ce--ee-ecCCCCccccCHHHHHHHHHHHhhCC
Q 021854 213 --LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQ-------------GF--QF-EEGCAANGSLSKEDAAFICVEALESI 274 (306)
Q Consensus 213 --~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~~-------------~~--~~-~~g~~~~~~Is~~DVA~~iv~aL~~~ 274 (306)
+.+.....+...+++++.|+||++........ .. .+ ........+.+++|+|++++.++.++
T Consensus 163 ~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dva~~~~~l~s~~ 242 (260)
T 1x1t_A 163 VGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGGTAVFLASDA 242 (260)
T ss_dssp HHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------CHHHHCTTCCCBCHHHHHHHHHHHHSGG
T ss_pred HHHHHHHHHHhccCCEEEEEEeecCccCchHHHhhhhhccccCCchHHHHHHHhhccCCCCCCcCHHHHHHHHHHHhChh
Confidence 11111222334689999999998653221100 00 00 00111234678999999999999754
Q ss_pred C--CCCcEEEEecCC
Q 021854 275 P--QTGLIFEVVNGE 287 (306)
Q Consensus 275 ~--~~g~~~~v~~g~ 287 (306)
. ..|+++++.+|.
T Consensus 243 ~~~~tG~~~~vdgG~ 257 (260)
T 1x1t_A 243 AAQITGTTVSVDGGW 257 (260)
T ss_dssp GTTCCSCEEEESTTG
T ss_pred hcCCCCCEEEECCCc
Confidence 2 468899998763
|
| >2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} | Back alignment and structure |
|---|
Probab=99.77 E-value=2.1e-18 Score=152.40 Aligned_cols=175 Identities=9% Similarity=0.050 Sum_probs=121.9
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhc----CccEEEEcCCch-
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR----GVRSIICPSEGF- 174 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~----~~d~vi~~~~g~- 174 (306)
|+|+||||+|+||++++++|+++|++|++++|+.++... .+.+|++|.++++++++ ++|+|||+++..
T Consensus 2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-------~~~~D~~~~~~~~~~~~~~~~~~d~vi~~Ag~~~ 74 (255)
T 2dkn_A 2 SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEA-------DLSTPGGRETAVAAVLDRCGGVLDGLVCCAGVGV 74 (255)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC-------CTTSHHHHHHHHHHHHHHHTTCCSEEEECCCCCT
T ss_pred cEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHccc-------cccCCcccHHHHHHHHHHcCCCccEEEECCCCCC
Confidence 689999999999999999999999999999998865431 26789999999988886 889999984311
Q ss_pred ------------------hhhc----ccccCCCEEEEecCcccccCC--------------------------CCccccc
Q 021854 175 ------------------ISNA----GSLKGVQHVILLSQLSVYRGS--------------------------GGIQALM 206 (306)
Q Consensus 175 ------------------~~~~----a~~~gvkr~V~iSS~~~~~~~--------------------------~~~~~~~ 206 (306)
+.++ +.+.+.++||++||..++.+. .+...|.
T Consensus 75 ~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~ 154 (255)
T 2dkn_A 75 TAANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPGAAELPMVEAMLAGDEARAIELAEQQGQTHLAYA 154 (255)
T ss_dssp TSSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSTTGGGCHHHHHHHHTCHHHHHHHHHHHCCHHHHHH
T ss_pred cchhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEeccccccccccccchhhhhcccchhhhhhhccccCCcchhHH
Confidence 1122 233467899999999887643 1222232
Q ss_pred chHHHHHHHHHHHHHH-------hcCCCEEEEEcCcccCCCC-------CCccee-eecCCCCccccCHHHHHHHHHHHh
Q 021854 207 KGNARKLAEQDESMLM-------ASGIPYTIIRTGVLQNTPG-------GKQGFQ-FEEGCAANGSLSKEDAAFICVEAL 271 (306)
Q Consensus 207 ~~~a~~~~~~aE~~l~-------~sgi~~tiiRPg~l~~~~~-------~~~~~~-~~~g~~~~~~Is~~DVA~~iv~aL 271 (306)
. .|...|.+++ ..++++++||||++..... ...... ...+ ....+++++|+|++++.++
T Consensus 155 ~-----sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~dva~~~~~l~ 228 (255)
T 2dkn_A 155 G-----SKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPLLQASKADPRYGESTRRFVA-PLGRGSEPREVAEAIAFLL 228 (255)
T ss_dssp H-----HHHHHHHHHHHTHHHHHHTTCEEEEEEECCBCSHHHHHHHHCTTTHHHHHSCCC-TTSSCBCHHHHHHHHHHHH
T ss_pred H-----HHHHHHHHHHHHHHHHhhcCcEEEEEcCCcccchhhhhcccchhhHHHHHHHHH-HhcCCCCHHHHHHHHHHHh
Confidence 2 2333333332 3689999999998643210 000000 0001 3346899999999999999
Q ss_pred hCC--CCCCcEEEEecCC
Q 021854 272 ESI--PQTGLIFEVVNGE 287 (306)
Q Consensus 272 ~~~--~~~g~~~~v~~g~ 287 (306)
.++ ...|+.|++.+|.
T Consensus 229 ~~~~~~~~G~~~~v~gg~ 246 (255)
T 2dkn_A 229 GPQASFIHGSVLFVDGGM 246 (255)
T ss_dssp SGGGTTCCSCEEEESTTH
T ss_pred CCCcccceeeEEEecCCe
Confidence 865 3568899999875
|
| >2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} | Back alignment and structure |
|---|
Probab=99.77 E-value=4.1e-18 Score=150.51 Aligned_cols=190 Identities=12% Similarity=0.102 Sum_probs=121.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEE-ecCcchhhh------hcCCCceeeeccCCCHHHHHHHhc-------C
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKAL-VKDKRNAME------SFGTYVESMAGDASNKKFLKTALR-------G 163 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l-~R~~~~~~~------~~~~~v~~v~~D~~d~~~l~~~~~-------~ 163 (306)
.+++|+||||+|+||++++++|+++|++|+++ .|+.+...+ ..+.++.++.+|++|.++++++++ +
T Consensus 4 ~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 83 (247)
T 2hq1_A 4 KGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDAFGR 83 (247)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 46899999999999999999999999999998 566554321 124568899999999999888776 7
Q ss_pred ccEEEEcCCch--------------------------hh----hcccccCCCEEEEecCcccccCCCCcccccchHHHH-
Q 021854 164 VRSIICPSEGF--------------------------IS----NAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK- 212 (306)
Q Consensus 164 ~d~vi~~~~g~--------------------------~~----~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~- 212 (306)
+|+|||+++.. +. ..+++.+.++||++||..+..+......|..+++..
T Consensus 84 ~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~ 163 (247)
T 2hq1_A 84 IDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSGKIINITSIAGIIGNAGQANYAASKAGLI 163 (247)
T ss_dssp CCEEEECC---------------CHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECC---------CHHHHHHHHHHH
T ss_pred CCEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCCCCcHhHHHHHHHH
Confidence 89999984310 01 112345778999999987665544555564433211
Q ss_pred -HHHHHHHHHHhcCCCEEEEEcCcccCCCC-CCcce---eeecCCCCccccCHHHHHHHHHHHhhCCC--CCCcEEEEec
Q 021854 213 -LAEQDESMLMASGIPYTIIRTGVLQNTPG-GKQGF---QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVN 285 (306)
Q Consensus 213 -~~~~aE~~l~~sgi~~tiiRPg~l~~~~~-~~~~~---~~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~~~v~~ 285 (306)
+.+.....+...++++++++||++..... ..... .+..+.....+++++|+|++++.++..+. ..|++|++.+
T Consensus 164 ~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~g 243 (247)
T 2hq1_A 164 GFTKSIAKEFAAKGIYCNAVAPGIIKTDMTDVLPDKVKEMYLNNIPLKRFGTPEEVANVVGFLASDDSNYITGQVINIDG 243 (247)
T ss_dssp HHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred HHHHHHHHHHHHcCcEEEEEEEEEEeccchhhcchHHHHHHHhhCCCCCCCCHHHHHHHHHHHcCcccccccCcEEEeCC
Confidence 11111122334689999999998643211 00000 01112223457899999999999887542 3688999987
Q ss_pred CC
Q 021854 286 GE 287 (306)
Q Consensus 286 g~ 287 (306)
|.
T Consensus 244 G~ 245 (247)
T 2hq1_A 244 GL 245 (247)
T ss_dssp TC
T ss_pred Cc
Confidence 64
|
| >1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.77 E-value=1.2e-17 Score=148.26 Aligned_cols=189 Identities=16% Similarity=0.119 Sum_probs=129.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcC-CCceeeeccCCCHHHHHHHhc-------CccEEEE
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG-TYVESMAGDASNKKFLKTALR-------GVRSIIC 169 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~-~~v~~v~~D~~d~~~l~~~~~-------~~d~vi~ 169 (306)
.+++++||||+|+||++++++|+++|++|+++.|+.++..+... .++.++.+|++|.++++++++ .+|++||
T Consensus 4 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lvn 83 (245)
T 1uls_A 4 KDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERGFAEALAHLGRLDGVVH 83 (245)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 46899999999999999999999999999999999876443221 137889999999998887765 4799999
Q ss_pred cCCch--------------------------h----hhcccccCCCEEEEecCcccccCCCCcccccchHHHH--HHHHH
Q 021854 170 PSEGF--------------------------I----SNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK--LAEQD 217 (306)
Q Consensus 170 ~~~g~--------------------------~----~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~--~~~~a 217 (306)
+++-. + ...+++.+.++||++||.. ..+..+...|..+++.. +.+..
T Consensus 84 ~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~-~~~~~~~~~Y~asK~a~~~~~~~l 162 (245)
T 1uls_A 84 YAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRV-YLGNLGQANYAASMAGVVGLTRTL 162 (245)
T ss_dssp CCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGG-GGCCTTCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEccch-hcCCCCchhHHHHHHHHHHHHHHH
Confidence 84310 0 1123345678999999988 55555555665543321 22222
Q ss_pred HHHHHhcCCCEEEEEcCcccCCCCCCcc-ee---eecCCCCccccCHHHHHHHHHHHhhCCC--CCCcEEEEecCC
Q 021854 218 ESMLMASGIPYTIIRTGVLQNTPGGKQG-FQ---FEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVNGE 287 (306)
Q Consensus 218 E~~l~~sgi~~tiiRPg~l~~~~~~~~~-~~---~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~~~v~~g~ 287 (306)
...+...++++++|+||++......... .. +........+.+++|+|++++.++.++. ..|+.+.+.+|.
T Consensus 163 a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG~ 238 (245)
T 1uls_A 163 ALELGRWGIRVNTLAPGFIETRMTAKVPEKVREKAIAATPLGRAGKPLEVAYAALFLLSDESSFITGQVLFVDGGR 238 (245)
T ss_dssp HHHHGGGTEEEEEEEECSBCCTTTSSSCHHHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred HHHHhHhCeEEEEEEeCcCcCcchhhcCHHHHHHHHhhCCCCCCcCHHHHHHHHHHHhCchhcCCcCCEEEECCCc
Confidence 2334457999999999987533221100 00 0011112346899999999999997543 468899998774
|
| >3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E | Back alignment and structure |
|---|
Probab=99.77 E-value=3.3e-18 Score=152.26 Aligned_cols=191 Identities=15% Similarity=0.134 Sum_probs=135.0
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhh---hcCCCceeeeccCCCHHHHHHHhc-------CccE
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALR-------GVRS 166 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~---~~~~~v~~v~~D~~d~~~l~~~~~-------~~d~ 166 (306)
..+|+++||||+|+||++++++|+++|++|+++.|+.++..+ ..+..+..+.+|++|.++++++++ ++|+
T Consensus 7 l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~ 86 (248)
T 3op4_A 7 LEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNVTNPESIEAVLKAITDEFGGVDI 86 (248)
T ss_dssp CTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHCCCSE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceEEEEeCCCHHHHHHHHHHHHHHcCCCCE
Confidence 457999999999999999999999999999999999876432 234467889999999998888776 7899
Q ss_pred EEEcCCch--------------------------hh----hcccccCCCEEEEecCcccccCCCCcccccchHHHH--HH
Q 021854 167 IICPSEGF--------------------------IS----NAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK--LA 214 (306)
Q Consensus 167 vi~~~~g~--------------------------~~----~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~--~~ 214 (306)
+||+++.. +. ..+.+.+..+||++||..++.+..+...|..+++.. +.
T Consensus 87 lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~l~ 166 (248)
T 3op4_A 87 LVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFT 166 (248)
T ss_dssp EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHHHHHHHH
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCCCCChHHHHHHHHHHHHH
Confidence 99984410 11 112345678999999998887777777776544321 12
Q ss_pred HHHHHHHHhcCCCEEEEEcCcccCCCCCCcc----eeeecCCCCccccCHHHHHHHHHHHhhCCC--CCCcEEEEecCC
Q 021854 215 EQDESMLMASGIPYTIIRTGVLQNTPGGKQG----FQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVNGE 287 (306)
Q Consensus 215 ~~aE~~l~~sgi~~tiiRPg~l~~~~~~~~~----~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~~~v~~g~ 287 (306)
+.....+...+++++.|+||++......... ..+........+.+++|+|++++.++.+.. -.|+++++.+|.
T Consensus 167 ~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v~~L~s~~~~~itG~~i~vdgG~ 245 (248)
T 3op4_A 167 KSMAREVASRGVTVNTVAPGFIETDMTKALNDEQRTATLAQVPAGRLGDPREIASAVAFLASPEAAYITGETLHVNGGM 245 (248)
T ss_dssp HHHHHHHGGGTEEEEEEEECSBSSTTTTTSCHHHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred HHHHHHHHHhCeEEEEEeeCCCCCchhhhcCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCCccCCccCcEEEECCCe
Confidence 2222234457999999999986543221110 001112223456799999999999887543 468999998875
|
| >4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.77 E-value=1e-17 Score=151.69 Aligned_cols=193 Identities=15% Similarity=0.110 Sum_probs=136.3
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhh---hcCCCceeeeccCCCHHHHHHHhc-------Ccc
Q 021854 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALR-------GVR 165 (306)
Q Consensus 96 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~---~~~~~v~~v~~D~~d~~~l~~~~~-------~~d 165 (306)
...+|+++||||+|+||++++++|+++|++|+++.|+.++..+ ..+..+.++.+|++|.++++++++ .+|
T Consensus 24 ~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD 103 (277)
T 4dqx_A 24 DLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIGSKAFGVRVDVSSAKDAESMVEKTTAKWGRVD 103 (277)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 4457999999999999999999999999999999999876432 245678899999999998887775 789
Q ss_pred EEEEcCCch------------------------------hhhcccccCCCEEEEecCcccccCCCCcccccchHHHH--H
Q 021854 166 SIICPSEGF------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK--L 213 (306)
Q Consensus 166 ~vi~~~~g~------------------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~--~ 213 (306)
++||+++.. ....+++.+..+||++||..++.+..+...|..+++.. +
T Consensus 104 ~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l 183 (277)
T 4dqx_A 104 VLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTATSAIADRTAYVASKGAISSL 183 (277)
T ss_dssp EEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHH
T ss_pred EEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECchhhCcCCCCChhHHHHHHHHHHH
Confidence 999984410 11123445667999999999888777777776554322 1
Q ss_pred HHHHHHHHHhcCCCEEEEEcCcccCCC-C-----CCcc-ee---eecCCCCccccCHHHHHHHHHHHhhCCC--CCCcEE
Q 021854 214 AEQDESMLMASGIPYTIIRTGVLQNTP-G-----GKQG-FQ---FEEGCAANGSLSKEDAAFICVEALESIP--QTGLIF 281 (306)
Q Consensus 214 ~~~aE~~l~~sgi~~tiiRPg~l~~~~-~-----~~~~-~~---~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~~ 281 (306)
.+.....+...+++++.|+||++.... . .... .. +........+.+++|+|++++.++.+.. ..|+++
T Consensus 184 ~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~~L~s~~~~~itG~~i 263 (277)
T 4dqx_A 184 TRAMAMDHAKEGIRVNAVAPGTIDSPYFTKIFAEAKDPAKLRSDFNARAVMDRMGTAEEIAEAMLFLASDRSRFATGSIL 263 (277)
T ss_dssp HHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHHTCSCHHHHHHHHHTTSTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred HHHHHHHhhhcCeEEEEEeeCcCcCchhhhhcccccchhHHHHHHHhcCcccCCcCHHHHHHHHHHHhCCccCCCcCCEE
Confidence 122222234568999999999864321 0 0000 00 1122223456789999999999997543 468999
Q ss_pred EEecCCc
Q 021854 282 EVVNGEE 288 (306)
Q Consensus 282 ~v~~g~~ 288 (306)
++.+|..
T Consensus 264 ~vdGG~~ 270 (277)
T 4dqx_A 264 TVDGGSS 270 (277)
T ss_dssp EESSSSS
T ss_pred EECCchh
Confidence 9998763
|
| >2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.77 E-value=8.9e-18 Score=149.94 Aligned_cols=187 Identities=14% Similarity=0.075 Sum_probs=128.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh---cCCCceeeeccCCCHHHHHHHhc-------CccEE
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALR-------GVRSI 167 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~---~~~~v~~v~~D~~d~~~l~~~~~-------~~d~v 167 (306)
.+|+++||||+|+||++++++|+++|++|+++.|+.++ .+. .. . .++.+|++|.++++++++ .+|++
T Consensus 5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~-~-~~~~~D~~~~~~~~~~~~~~~~~~g~iD~l 81 (256)
T 2d1y_A 5 AGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAIG-G-AFFQVDLEDERERVRFVEEAAYALGRVDVL 81 (256)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHHHT-C-EEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHhh-C-CEEEeeCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 47899999999999999999999999999999998865 321 22 3 788999999988887765 67999
Q ss_pred EEcCCch--------------------------h----hhcccccCCCEEEEecCcccccCCCCcccccchHHHH--HHH
Q 021854 168 ICPSEGF--------------------------I----SNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK--LAE 215 (306)
Q Consensus 168 i~~~~g~--------------------------~----~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~--~~~ 215 (306)
||+++.. + ...+++.+.++||++||..++.+..+...|..+++.. +.+
T Consensus 82 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~ 161 (256)
T 2d1y_A 82 VNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQENAAYNASKGGLVNLTR 161 (256)
T ss_dssp EECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBCTTBHHHHHHHHHHHHHHH
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccccccCCCCCChhHHHHHHHHHHHHH
Confidence 9984310 1 1122345678999999998876665666665543321 111
Q ss_pred HHHHHHHhcCCCEEEEEcCcccCCCC---------CCcc-eeeecCCCCccccCHHHHHHHHHHHhhCCC--CCCcEEEE
Q 021854 216 QDESMLMASGIPYTIIRTGVLQNTPG---------GKQG-FQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEV 283 (306)
Q Consensus 216 ~aE~~l~~sgi~~tiiRPg~l~~~~~---------~~~~-~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~~~v 283 (306)
.....+...+++++.|+||++..... .... ..+........+.+++|+|++++.++.++. ..|+++++
T Consensus 162 ~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~s~~~~~~~G~~~~v 241 (256)
T 2d1y_A 162 SLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLFLASEKASFITGAILPV 241 (256)
T ss_dssp HHHHHHGGGTEEEEEEEECSBCCHHHHHHHC--------CHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEE
T ss_pred HHHHHHhhcCeEEEEEeeCCccCchhhhccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCCCCCEEEE
Confidence 12222334689999999998642210 0000 001111222457899999999999997653 46889999
Q ss_pred ecCC
Q 021854 284 VNGE 287 (306)
Q Consensus 284 ~~g~ 287 (306)
.+|.
T Consensus 242 ~gG~ 245 (256)
T 2d1y_A 242 DGGM 245 (256)
T ss_dssp STTG
T ss_pred CCCc
Confidence 9875
|
| >1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.77 E-value=6e-18 Score=149.14 Aligned_cols=191 Identities=15% Similarity=0.094 Sum_probs=130.8
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhc--CCCceeeeccCCCHHHHHHHhcC---ccEEEEcC
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF--GTYVESMAGDASNKKFLKTALRG---VRSIICPS 171 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~--~~~v~~v~~D~~d~~~l~~~~~~---~d~vi~~~ 171 (306)
..+++|+||||+|+||++++++|+++|++|+++.|+.++..+.. ..+++++.+|++|.++++++++. +|+|||++
T Consensus 5 ~~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~A 84 (244)
T 1cyd_A 5 FSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALGGIGPVDLLVNNA 84 (244)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCSEEEECC
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCCcEEecCCCHHHHHHHHHHcCCCCEEEECC
Confidence 35789999999999999999999999999999999987643321 13578889999999999999874 69999984
Q ss_pred Cch--------------------------hhhc----ccccC-CCEEEEecCcccccCCCCcccccchHHHHH--HHHHH
Q 021854 172 EGF--------------------------ISNA----GSLKG-VQHVILLSQLSVYRGSGGIQALMKGNARKL--AEQDE 218 (306)
Q Consensus 172 ~g~--------------------------~~~~----a~~~g-vkr~V~iSS~~~~~~~~~~~~~~~~~a~~~--~~~aE 218 (306)
+.. +.++ +.+.+ .++||++||..++.+..+...|..+++... .+...
T Consensus 85 g~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~~a 164 (244)
T 1cyd_A 85 ALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTKGAMTMLTKAMA 164 (244)
T ss_dssp CCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHH
T ss_pred cccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhcCCCCCcchhHHHHHHHHHHHHHHH
Confidence 410 1111 22235 689999999988876666666654432211 11111
Q ss_pred HHHHhcCCCEEEEEcCcccCCCCC---Ccc-e--eeecCCCCccccCHHHHHHHHHHHhhCCC--CCCcEEEEecCC
Q 021854 219 SMLMASGIPYTIIRTGVLQNTPGG---KQG-F--QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVNGE 287 (306)
Q Consensus 219 ~~l~~sgi~~tiiRPg~l~~~~~~---~~~-~--~~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~~~v~~g~ 287 (306)
..+...++++++||||++...... ... . .+..+.....+++++|+|++++.++.++. ..|+.+++.+|.
T Consensus 165 ~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~ 241 (244)
T 1cyd_A 165 MELGPHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKERHPLRKFAEVEDVVNSILFLLSDRSASTSGGGILVDAGY 241 (244)
T ss_dssp HHHGGGTEEEEEEEECCBTTHHHHHHTCCHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGGGTTCCSSEEEESTTG
T ss_pred HHhhhcCeEEEEEecCcccCccccccccCHHHHHHHHhcCCccCCCCHHHHHHHHHHHhCchhhcccCCEEEECCCc
Confidence 112236899999999986532110 000 0 01112233567899999999999997653 357889988764
|
| >3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=99.77 E-value=3.8e-18 Score=152.32 Aligned_cols=191 Identities=13% Similarity=0.136 Sum_probs=132.4
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhc------CccEEEEc
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR------GVRSIICP 170 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~------~~d~vi~~ 170 (306)
..+|+++||||+|+||++++++|+++|++|+++.|+.+...+..+..+.++.+|++|.++++++++ .+|++||+
T Consensus 7 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~g~id~lv~n 86 (257)
T 3tl3_A 7 IRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDVVADLGDRARFAAADVTDEAAVASALDLAETMGTLRIVVNC 86 (257)
T ss_dssp ---CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHTCTTEEEEECCTTCHHHHHHHHHHHHHHSCEEEEEEC
T ss_pred ecCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhCCCCEEEEC
Confidence 457999999999999999999999999999999998777666667789999999999999888776 78999998
Q ss_pred CCc------------h------------------hhh----cccc--------cCCCEEEEecCcccccCCCCcccccch
Q 021854 171 SEG------------F------------------ISN----AGSL--------KGVQHVILLSQLSVYRGSGGIQALMKG 208 (306)
Q Consensus 171 ~~g------------~------------------~~~----~a~~--------~gvkr~V~iSS~~~~~~~~~~~~~~~~ 208 (306)
++. . +.+ .+.+ .+-.+||++||..++.+..+...|..+
T Consensus 87 Ag~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as 166 (257)
T 3tl3_A 87 AGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDGQIGQAAYSAS 166 (257)
T ss_dssp GGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC--CCHHHHHHHHHH
T ss_pred CCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhhcCCCCCCccHHHH
Confidence 431 0 001 1122 345689999999888766555666554
Q ss_pred HHHH--HHHHHHHHHHhcCCCEEEEEcCcccCCCCCCcc-e---eeecCCCC-ccccCHHHHHHHHHHHhhCCCCCCcEE
Q 021854 209 NARK--LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQG-F---QFEEGCAA-NGSLSKEDAAFICVEALESIPQTGLIF 281 (306)
Q Consensus 209 ~a~~--~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~~~-~---~~~~g~~~-~~~Is~~DVA~~iv~aL~~~~~~g~~~ 281 (306)
++.. +.+.....+...+|+++.|+||++......... . .+...... ..+.+++|+|++++.++.++...|+++
T Consensus 167 Kaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~r~~~p~dva~~v~~l~s~~~itG~~i 246 (257)
T 3tl3_A 167 KGGVVGMTLPIARDLASHRIRVMTIAPGLFDTPLLASLPEEARASLGKQVPHPSRLGNPDEYGALAVHIIENPMLNGEVI 246 (257)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTC---CHHHHHHHHHTSSSSCSCBCHHHHHHHHHHHHHCTTCCSCEE
T ss_pred HHHHHHHHHHHHHHhcccCcEEEEEEecCccChhhhhccHHHHHHHHhcCCCCCCccCHHHHHHHHHHHhcCCCCCCCEE
Confidence 3321 112222234457899999999986543221100 0 00111122 456789999999999999876789999
Q ss_pred EEecCC
Q 021854 282 EVVNGE 287 (306)
Q Consensus 282 ~v~~g~ 287 (306)
.+.+|-
T Consensus 247 ~vdGG~ 252 (257)
T 3tl3_A 247 RLDGAI 252 (257)
T ss_dssp EESTTC
T ss_pred EECCCc
Confidence 998875
|
| >2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=7.2e-18 Score=150.80 Aligned_cols=191 Identities=14% Similarity=0.053 Sum_probs=130.8
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh------cCCCceeeeccCCCHHHHHHHh--------c
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTAL--------R 162 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~~--------~ 162 (306)
..+|+++||||+|+||++++++|+++|++|+++.|+.++..+. .+.++.++.+|++|.+++++++ .
T Consensus 7 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g 86 (260)
T 2ae2_A 7 LEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHG 86 (260)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTT
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 3578999999999999999999999999999999998764321 1346888999999998888877 4
Q ss_pred CccEEEEcCCch--------------------------hhhc----ccccCCCEEEEecCcccccCCCCcccccchHHHH
Q 021854 163 GVRSIICPSEGF--------------------------ISNA----GSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK 212 (306)
Q Consensus 163 ~~d~vi~~~~g~--------------------------~~~~----a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~ 212 (306)
.+|++||+++-. +.++ +++.+.++||++||..++.+..+...|..+++..
T Consensus 87 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~ 166 (260)
T 2ae2_A 87 KLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKGAM 166 (260)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCCTTCHHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCCcchHHHHHHHH
Confidence 689999984310 1111 2345678999999998877665666665443321
Q ss_pred H--HHHHHHHHHhcCCCEEEEEcCcccCCCC----CCcc--e---eeecCCCCccccCHHHHHHHHHHHhhCCC--CCCc
Q 021854 213 L--AEQDESMLMASGIPYTIIRTGVLQNTPG----GKQG--F---QFEEGCAANGSLSKEDAAFICVEALESIP--QTGL 279 (306)
Q Consensus 213 ~--~~~aE~~l~~sgi~~tiiRPg~l~~~~~----~~~~--~---~~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~ 279 (306)
. .+.....+...++++++|+||++..... .... . .+........+.+++|+|++++.++..+. ..|+
T Consensus 167 ~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~v~~l~s~~~~~~tG~ 246 (260)
T 2ae2_A 167 DQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAAMVAFLCFPAASYVTGQ 246 (260)
T ss_dssp HHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTSTTCSCBCHHHHHHHHHHHHSGGGTTCCSC
T ss_pred HHHHHHHHHHHhhcCcEEEEEecCCCCCcchhhhccChhhHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCccccCCCCC
Confidence 1 1111112234689999999998643210 0000 0 01111222347899999999999987543 4689
Q ss_pred EEEEecCC
Q 021854 280 IFEVVNGE 287 (306)
Q Consensus 280 ~~~v~~g~ 287 (306)
++++.+|.
T Consensus 247 ~~~vdgG~ 254 (260)
T 2ae2_A 247 IIYVDGGL 254 (260)
T ss_dssp EEEESTTG
T ss_pred EEEECCCc
Confidence 99998774
|
| >1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.76 E-value=5.2e-18 Score=151.96 Aligned_cols=189 Identities=14% Similarity=0.098 Sum_probs=127.1
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEec-Ccchhhh------hcCCCceeeeccCCCHHHHHHHhc-------
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVK-DKRNAME------SFGTYVESMAGDASNKKFLKTALR------- 162 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R-~~~~~~~------~~~~~v~~v~~D~~d~~~l~~~~~------- 162 (306)
..+++|+||||+|+||++++++|+++|++|+++.| +.++..+ ..+.++.++.+|++|.++++++++
T Consensus 19 ~~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 98 (274)
T 1ja9_A 19 LAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFG 98 (274)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 45789999999999999999999999999999999 5544321 124578899999999999888876
Q ss_pred CccEEEEcCCch--------------------------hhh----cccccCCCEEEEecCcccc-cCCCCcccccchHHH
Q 021854 163 GVRSIICPSEGF--------------------------ISN----AGSLKGVQHVILLSQLSVY-RGSGGIQALMKGNAR 211 (306)
Q Consensus 163 ~~d~vi~~~~g~--------------------------~~~----~a~~~gvkr~V~iSS~~~~-~~~~~~~~~~~~~a~ 211 (306)
++|+|||+++.. +.+ .++ .+ ++||++||..++ .+......|..+++.
T Consensus 99 ~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~-~~iv~~sS~~~~~~~~~~~~~Y~~sK~a 176 (274)
T 1ja9_A 99 GLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCR-RG-GRIILTSSIAAVMTGIPNHALYAGSKAA 176 (274)
T ss_dssp CEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEE-EE-EEEEEECCGGGTCCSCCSCHHHHHHHHH
T ss_pred CCCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHh-hC-CEEEEEcChHhccCCCCCCchHHHHHHH
Confidence 789999984310 111 122 23 799999999887 555555556443322
Q ss_pred HHH--HHHHHHHHhcCCCEEEEEcCcccCCCCC------------Cc--ce---eeecCCCCccccCHHHHHHHHHHHhh
Q 021854 212 KLA--EQDESMLMASGIPYTIIRTGVLQNTPGG------------KQ--GF---QFEEGCAANGSLSKEDAAFICVEALE 272 (306)
Q Consensus 212 ~~~--~~aE~~l~~sgi~~tiiRPg~l~~~~~~------------~~--~~---~~~~g~~~~~~Is~~DVA~~iv~aL~ 272 (306)
... +.....+...+++++++|||++...... .. .. .+..+.....+++++|+|++++.++.
T Consensus 177 ~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~~ 256 (274)
T 1ja9_A 177 VEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIGYPADIGRAVSALCQ 256 (274)
T ss_dssp HHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHhhhcCeEEEEEeeCcccccchhcccccccccccccCchHHHHHHHHhcCCCCCccCHHHHHHHHHHHhC
Confidence 111 1111112236999999999986422100 00 00 01122233457899999999999997
Q ss_pred CCC--CCCcEEEEecCC
Q 021854 273 SIP--QTGLIFEVVNGE 287 (306)
Q Consensus 273 ~~~--~~g~~~~v~~g~ 287 (306)
++. ..|++|++.+|.
T Consensus 257 ~~~~~~~G~~~~v~gG~ 273 (274)
T 1ja9_A 257 EESEWINGQVIKLTGGG 273 (274)
T ss_dssp GGGTTCCSCEEEESTTC
T ss_pred cccccccCcEEEecCCc
Confidence 643 368899998764
|
| >1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.76 E-value=1e-17 Score=149.19 Aligned_cols=193 Identities=15% Similarity=0.084 Sum_probs=129.0
Q ss_pred CCCccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCC-CHHHHHHHhcCccEEEEcC
Q 021854 93 EFPEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDAS-NKKFLKTALRGVRSIICPS 171 (306)
Q Consensus 93 ~~~~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~-d~~~l~~~~~~~d~vi~~~ 171 (306)
......+|+|+||||+|+||++++++|+++|++|+++.|+.+...+. + .+.++ +|+. +.+.+.+.+.++|++||++
T Consensus 13 ~~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~-~-~~~~~-~D~~~~~~~~~~~~~~iD~lv~~A 89 (249)
T 1o5i_A 13 MELGIRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRS-G-HRYVV-CDLRKDLDLLFEKVKEVDILVLNA 89 (249)
T ss_dssp ---CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHT-C-SEEEE-CCTTTCHHHHHHHSCCCSEEEECC
T ss_pred HHhccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHhh-C-CeEEE-eeHHHHHHHHHHHhcCCCEEEECC
Confidence 34556789999999999999999999999999999999998554433 3 56666 9993 3444444555899999984
Q ss_pred Cch------------------------------hhhcccccCCCEEEEecCcccccCCCCcccccchHHHH--HHHHHHH
Q 021854 172 EGF------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK--LAEQDES 219 (306)
Q Consensus 172 ~g~------------------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~--~~~~aE~ 219 (306)
+.. +...+++.+.++||++||..++.+..+...|..+++.. +.+....
T Consensus 90 g~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~ 169 (249)
T 1o5i_A 90 GGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIENLYTSNSARMALTGFLKTLSF 169 (249)
T ss_dssp CCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchHhcCCCCCCchHHHHHHHHHHHHHHHHH
Confidence 310 11224456788999999999887766666665543321 1122222
Q ss_pred HHHhcCCCEEEEEcCcccCCCCCC--cce---eeecCCCCccccCHHHHHHHHHHHhhCCC--CCCcEEEEecCCc
Q 021854 220 MLMASGIPYTIIRTGVLQNTPGGK--QGF---QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVNGEE 288 (306)
Q Consensus 220 ~l~~sgi~~tiiRPg~l~~~~~~~--~~~---~~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~~~v~~g~~ 288 (306)
.+...++++++|+||++....... ... .+........+.+++|+|++++.++.++. ..|+.+++.+|..
T Consensus 170 e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~i~~l~s~~~~~~tG~~~~vdgG~~ 245 (249)
T 1o5i_A 170 EVAPYGITVNCVAPGWTETERVKELLSEEKKKQVESQIPMRRMAKPEEIASVVAFLCSEKASYLTGQTIVVDGGLS 245 (249)
T ss_dssp HHGGGTEEEEEEEECSBCCTTHHHHSCHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTCC
T ss_pred HhhhcCeEEEEEeeCCCccCcccccchhhHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCCCCCEEEECCCcc
Confidence 334579999999999865332100 000 11111222446799999999999987543 4589999998753
|
| >3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A | Back alignment and structure |
|---|
Probab=99.76 E-value=4e-18 Score=153.45 Aligned_cols=192 Identities=14% Similarity=0.132 Sum_probs=129.8
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhh---hcCCCceeeeccCCCHHHHHHHhc-------Ccc
Q 021854 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALR-------GVR 165 (306)
Q Consensus 96 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~---~~~~~v~~v~~D~~d~~~l~~~~~-------~~d 165 (306)
...+|+++||||+|+||++++++|+++|++|+++.|+.++..+ ..+.++.++.+|++|.++++++++ ++|
T Consensus 24 ~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD 103 (266)
T 3grp_A 24 KLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLGKDVFVFSANLSDRKSIKQLAEVAEREMEGID 103 (266)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHHHHHHHTSCC
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEeecCCHHHHHHHHHHHHHHcCCCC
Confidence 3457999999999999999999999999999999999876433 345678999999999998887775 789
Q ss_pred EEEEcCCch------------------------------hhhcccccCCCEEEEecCcccccCCCCcccccchHHHH--H
Q 021854 166 SIICPSEGF------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK--L 213 (306)
Q Consensus 166 ~vi~~~~g~------------------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~--~ 213 (306)
++||+++.. +...+.+.+.++||++||..++.+..+...|..+++.. +
T Consensus 104 ~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~~ 183 (266)
T 3grp_A 104 ILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRRYGRIINITSIVGVVGNPGQTNYCAAKAGLIGF 183 (266)
T ss_dssp EEEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCC-------CHHHHHHHHHHHHHH
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEECCHHHcCCCCCchhHHHHHHHHHHH
Confidence 999984411 11123446678999999998887766666675544321 1
Q ss_pred HHHHHHHHHhcCCCEEEEEcCcccCCCCC--Cc--ceeeecCCCCccccCHHHHHHHHHHHhhCCC--CCCcEEEEecCC
Q 021854 214 AEQDESMLMASGIPYTIIRTGVLQNTPGG--KQ--GFQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVNGE 287 (306)
Q Consensus 214 ~~~aE~~l~~sgi~~tiiRPg~l~~~~~~--~~--~~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~~~v~~g~ 287 (306)
.+.....+...+++++.|+||++...... .. ...+........+.+++|+|++++.++.+.. -.|++++|.+|-
T Consensus 184 ~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~r~~~~edvA~~v~~L~s~~~~~itG~~i~vdGG~ 263 (266)
T 3grp_A 184 SKALAQEIASRNITVNCIAPGFIKSAMTDKLNEKQKEAIMAMIPMKRMGIGEEIAFATVYLASDEAAYLTGQTLHINGGM 263 (266)
T ss_dssp HHHHHHHHGGGTEEEEEEEECSBCSHHHHTCCHHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred HHHHHHHhhhhCcEEEEEeeCcCCCchhhccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccCCEEEECCCe
Confidence 12222223456999999999986432110 00 0001122223456788999999999987543 468999998774
|
| >2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.76 E-value=1.1e-17 Score=147.62 Aligned_cols=182 Identities=12% Similarity=0.111 Sum_probs=126.4
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCC-------eEEEEecCcchhhhh------cCCCceeeeccCCCHHHHHHHhc---
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKRT-------RIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR--- 162 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g~-------~V~~l~R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~~~--- 162 (306)
+++|+||||+|+||++++++|+++|+ +|+++.|+.++.... .+.++.++.+|++|.++++++++
T Consensus 2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~ 81 (244)
T 2bd0_A 2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIV 81 (244)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHHHHH
Confidence 57899999999999999999999999 999999988653321 13468899999999998888775
Q ss_pred ----CccEEEEcCCch--------------------------hhhc----ccccCCCEEEEecCcccccCCCCcccccch
Q 021854 163 ----GVRSIICPSEGF--------------------------ISNA----GSLKGVQHVILLSQLSVYRGSGGIQALMKG 208 (306)
Q Consensus 163 ----~~d~vi~~~~g~--------------------------~~~~----a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~ 208 (306)
++|+|||+++.. +.++ +.+.+.++||++||..++.+..+...|..+
T Consensus 82 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~s 161 (244)
T 2bd0_A 82 ERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAFRHSSIYCMS 161 (244)
T ss_dssp HHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred HhCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEEecchhcCCCCCCchhHHH
Confidence 689999984310 1111 234577899999999888766666666554
Q ss_pred HHHH--HHHHHHHHHHhcCCCEEEEEcCcccCCCCCCcceeeecCCCCccccCHHHHHHHHHHHhhCCCC--CCcEEEEe
Q 021854 209 NARK--LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQ--TGLIFEVV 284 (306)
Q Consensus 209 ~a~~--~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~~~~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~~--~g~~~~v~ 284 (306)
++.. +.+.....+...++++++||||++......... . .....+++++|+|++++.++.++.. .++++...
T Consensus 162 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~----~-~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~ 236 (244)
T 2bd0_A 162 KFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVD----D-EMQALMMMPEDIAAPVVQAYLQPSRTVVEEIILRP 236 (244)
T ss_dssp HHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCC----S-TTGGGSBCHHHHHHHHHHHHTSCTTEEEEEEEEEE
T ss_pred HHHHHHHHHHHHHHhhccCcEEEEEECCCccchhhhhcc----c-cccccCCCHHHHHHHHHHHHhCCccccchheEEec
Confidence 3321 111122233457899999999986543221110 0 1123678999999999999986643 34444444
Q ss_pred c
Q 021854 285 N 285 (306)
Q Consensus 285 ~ 285 (306)
+
T Consensus 237 ~ 237 (244)
T 2bd0_A 237 T 237 (244)
T ss_dssp T
T ss_pred c
Confidence 3
|
| >1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.76 E-value=1.3e-17 Score=150.30 Aligned_cols=191 Identities=14% Similarity=0.098 Sum_probs=130.3
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh------cCCCceeeeccCCCHHHHHHHh--------c
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTAL--------R 162 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~~--------~ 162 (306)
..+++++||||+|+||++++++|+++|++|+++.|+.++..+. .+.++.++.+|++|.+++++++ .
T Consensus 19 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g 98 (273)
T 1ae1_A 19 LKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDG 98 (273)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTS
T ss_pred CCCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 3578999999999999999999999999999999998654321 2456888999999998888776 5
Q ss_pred CccEEEEcCCch--------------------------hhh----cccccCCCEEEEecCcccccCCCCcccccchHHHH
Q 021854 163 GVRSIICPSEGF--------------------------ISN----AGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK 212 (306)
Q Consensus 163 ~~d~vi~~~~g~--------------------------~~~----~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~ 212 (306)
.+|++||+++.. +.+ .+++.+.++||++||..++.+..+...|..+++..
T Consensus 99 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~ 178 (273)
T 1ae1_A 99 KLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASKGAI 178 (273)
T ss_dssp CCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCCTTCHHHHHHHHHH
T ss_pred CCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHhhcCCCCCcchhHHHHHHH
Confidence 689999984310 111 12345678999999999887766666675543321
Q ss_pred --HHHHHHHHHHhcCCCEEEEEcCcccCCCCCCc-c------ee---eecCCCCccccCHHHHHHHHHHHhhCCC--CCC
Q 021854 213 --LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQ-G------FQ---FEEGCAANGSLSKEDAAFICVEALESIP--QTG 278 (306)
Q Consensus 213 --~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~~-~------~~---~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g 278 (306)
+.+.....+...++++++|+||++........ . .. +........+.+++|+|++++.++..+. ..|
T Consensus 179 ~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~~~~~~tG 258 (273)
T 1ae1_A 179 NQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQEVSALIAFLCFPAASYITG 258 (273)
T ss_dssp HHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHHSTTCSCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred HHHHHHHHHHHhhcCcEEEEEEeCCCcCchhhhhhhcccCcHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCcCC
Confidence 11222222345699999999998653321110 0 00 0000112346789999999999986543 468
Q ss_pred cEEEEecCC
Q 021854 279 LIFEVVNGE 287 (306)
Q Consensus 279 ~~~~v~~g~ 287 (306)
+++++.+|.
T Consensus 259 ~~i~vdGG~ 267 (273)
T 1ae1_A 259 QIIWADGGF 267 (273)
T ss_dssp CEEEESTTG
T ss_pred CEEEECCCc
Confidence 999998774
|
| >3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=99.76 E-value=7.3e-18 Score=151.78 Aligned_cols=180 Identities=13% Similarity=0.102 Sum_probs=128.4
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhc-------CccEEEE
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR-------GVRSIIC 169 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~-------~~d~vi~ 169 (306)
.++|+++||||+|+||++++++|+++|++|+++.|+.++..+.....+.++.+|++|.++++++++ ++|++||
T Consensus 14 ~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvn 93 (266)
T 3p19_A 14 SMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKALNLPNTLCAQVDVTDKYTFDTAITRAEKIYGPADAIVN 93 (266)
T ss_dssp -CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHTTCCTTEEEEECCTTCHHHHHHHHHHHHHHHCSEEEEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHhhcCCceEEEecCCCHHHHHHHHHHHHHHCCCCCEEEE
Confidence 457999999999999999999999999999999999887665555578899999999988887775 7899999
Q ss_pred cCCch------------------------------hhhcccccCCCEEEEecCcccccCCCCcccccchHHHH--HHHHH
Q 021854 170 PSEGF------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK--LAEQD 217 (306)
Q Consensus 170 ~~~g~------------------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~--~~~~a 217 (306)
+++.. +...+++.+.++||++||..++.+..+...|..+++.. +.+..
T Consensus 94 nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~asK~a~~~~~~~l 173 (266)
T 3p19_A 94 NAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARNCGTIINISSIAGKKTFPDHAAYCGTKFAVHAISENV 173 (266)
T ss_dssp CCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHH
T ss_pred CCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhCCCCCCCchHHHHHHHHHHHHHHH
Confidence 84410 11223456788999999999887776766776544322 11222
Q ss_pred HHHHHhcCCCEEEEEcCcccCCCCCCcc--ee---eec-CCCCccccCHHHHHHHHHHHhhCCCC
Q 021854 218 ESMLMASGIPYTIIRTGVLQNTPGGKQG--FQ---FEE-GCAANGSLSKEDAAFICVEALESIPQ 276 (306)
Q Consensus 218 E~~l~~sgi~~tiiRPg~l~~~~~~~~~--~~---~~~-g~~~~~~Is~~DVA~~iv~aL~~~~~ 276 (306)
...+...+++++.|+||++......... .. +.. ......+++++|||++++.++.++..
T Consensus 174 a~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~av~~l~~~~~~ 238 (266)
T 3p19_A 174 REEVAASNVRVMTIAPSAVKTELLSHTTSQQIKDGYDAWRVDMGGVLAADDVARAVLFAYQQPQN 238 (266)
T ss_dssp HHHHGGGTCEEEEEEECSBSSSGGGGCSCHHHHHHHHHHHHHTTCCBCHHHHHHHHHHHHHSCTT
T ss_pred HHHhcccCcEEEEEeeCccccchhhcccchhhhHHHHhhcccccCCCCHHHHHHHHHHHHcCCCC
Confidence 2223457999999999986533211100 00 000 00123468999999999999998764
|
| >3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.76 E-value=1.9e-17 Score=149.27 Aligned_cols=191 Identities=12% Similarity=0.015 Sum_probs=135.8
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhh---hcCCCceeeeccCCCHHHHHHHhc-------CccE
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALR-------GVRS 166 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~---~~~~~v~~v~~D~~d~~~l~~~~~-------~~d~ 166 (306)
..+|+++||||+|+||++++++|+++|++|+++.|+.++..+ ..+.++.++.+|++|.++++++++ .+|+
T Consensus 9 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~ 88 (271)
T 3tzq_B 9 LENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVGRGAVHHVVDLTNEVSVRALIDFTIDTFGRLDI 88 (271)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCCeEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 457999999999999999999999999999999999876432 335678899999999998888776 7899
Q ss_pred EEEcCCch----------------------------hhhc----ccccCCCEEEEecCcccccCCCCcccccchHHHHH-
Q 021854 167 IICPSEGF----------------------------ISNA----GSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKL- 213 (306)
Q Consensus 167 vi~~~~g~----------------------------~~~~----a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~~- 213 (306)
+||+++.. +.++ +++.+.++||++||..++.+..+...|..+++...
T Consensus 89 lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~ 168 (271)
T 3tzq_B 89 VDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAGGGAIVNISSATAHAAYDMSTAYACTKAAIET 168 (271)
T ss_dssp EEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSBCSSCHHHHHHHHHHHH
T ss_pred EEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCHHHcCCCCCChHHHHHHHHHHH
Confidence 99983310 1111 24567789999999998877777777765443221
Q ss_pred -HHHHHHHHHhcCCCEEEEEcCcccCCCCC-Ccc--e--eeecCCCCccccCHHHHHHHHHHHhhCCC--CCCcEEEEec
Q 021854 214 -AEQDESMLMASGIPYTIIRTGVLQNTPGG-KQG--F--QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVN 285 (306)
Q Consensus 214 -~~~aE~~l~~sgi~~tiiRPg~l~~~~~~-~~~--~--~~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~~~v~~ 285 (306)
.+.....+...+++++.|+||++...... ... . .+........+.+++|+|++++.++.+.. -.|+++++.+
T Consensus 169 l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdG 248 (271)
T 3tzq_B 169 LTRYVATQYGRHGVRCNAIAPGLVRTPRLEVGLPQPIVDIFATHHLAGRIGEPHEIAELVCFLASDRAAFITGQVIAADS 248 (271)
T ss_dssp HHHHHHHHHGGGTEEEEEEEECCBCCTTTC---CHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred HHHHHHHHHhhcCEEEEEEEeCCCcCccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcccCCcCCCEEEECC
Confidence 12222223347999999999986543221 100 0 01112222446789999999999997543 4689999998
Q ss_pred CC
Q 021854 286 GE 287 (306)
Q Consensus 286 g~ 287 (306)
|.
T Consensus 249 G~ 250 (271)
T 3tzq_B 249 GL 250 (271)
T ss_dssp TT
T ss_pred Cc
Confidence 84
|
| >1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.76 E-value=7.3e-18 Score=148.14 Aligned_cols=184 Identities=15% Similarity=0.163 Sum_probs=127.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhc------CccEEEEcC
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR------GVRSIICPS 171 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~------~~d~vi~~~ 171 (306)
++++|+||||+|+||++++++|+++|++|+++.|+.+ ...+.++.+|++|.++++++++ ++|++||++
T Consensus 1 ~~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~------~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~li~~a 74 (242)
T 1uay_A 1 MERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE------GEDLIYVEGDVTREEDVRRAVARAQEEAPLFAVVSAA 74 (242)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC------SSSSEEEECCTTCHHHHHHHHHHHHHHSCEEEEEECC
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc------ccceEEEeCCCCCHHHHHHHHHHHHhhCCceEEEEcc
Confidence 3689999999999999999999999999999999875 2356889999999999998887 789999984
Q ss_pred Cc----------------h--------------hhhcc----cccC------CCEEEEecCcccccCCCCcccccchHHH
Q 021854 172 EG----------------F--------------ISNAG----SLKG------VQHVILLSQLSVYRGSGGIQALMKGNAR 211 (306)
Q Consensus 172 ~g----------------~--------------~~~~a----~~~g------vkr~V~iSS~~~~~~~~~~~~~~~~~a~ 211 (306)
+. . +.+++ .+.+ .++||++||..++.+..+...|..+++.
T Consensus 75 g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a 154 (242)
T 1uay_A 75 GVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAAYAASKGG 154 (242)
T ss_dssp CCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCTTCHHHHHHHHH
T ss_pred cccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCCCCchhhHHHHH
Confidence 31 1 01111 1121 2399999999888776666666554332
Q ss_pred H--HHHHHHHHHHhcCCCEEEEEcCcccCCCCCC-cce---eeecCCCC-ccccCHHHHHHHHHHHhhCCCCCCcEEEEe
Q 021854 212 K--LAEQDESMLMASGIPYTIIRTGVLQNTPGGK-QGF---QFEEGCAA-NGSLSKEDAAFICVEALESIPQTGLIFEVV 284 (306)
Q Consensus 212 ~--~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~-~~~---~~~~g~~~-~~~Is~~DVA~~iv~aL~~~~~~g~~~~v~ 284 (306)
. +.+.....+...++++++||||++....... ... .+...... ..+.+++|+|++++.++.++...|+.|++.
T Consensus 155 ~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~G~~~~v~ 234 (242)
T 1uay_A 155 VVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLPEKAKASLAAQVPFPPRLGRPEEYAALVLHILENPMLNGEVVRLD 234 (242)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTSCHHHHHHHHTTCCSSCSCCCHHHHHHHHHHHHHCTTCCSCEEEES
T ss_pred HHHHHHHHHHHHhhcCcEEEEEEeccCcchhhhccchhHHHHHHhhCCCcccCCCHHHHHHHHHHHhcCCCCCCcEEEEc
Confidence 1 1112222233469999999999864321100 000 00011111 346799999999999998855678999998
Q ss_pred cCC
Q 021854 285 NGE 287 (306)
Q Consensus 285 ~g~ 287 (306)
+|.
T Consensus 235 gG~ 237 (242)
T 1uay_A 235 GAL 237 (242)
T ss_dssp TTC
T ss_pred CCe
Confidence 875
|
| >3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=99.76 E-value=2.5e-18 Score=155.61 Aligned_cols=208 Identities=15% Similarity=0.153 Sum_probs=141.9
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh------cCC---CceeeeccCCCHHHHHHHhc----
Q 021854 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGT---YVESMAGDASNKKFLKTALR---- 162 (306)
Q Consensus 96 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~------~~~---~v~~v~~D~~d~~~l~~~~~---- 162 (306)
...+|+++||||+|+||++++++|+++|++|+++.|+.++..+. .+. .+.++.+|++|.++++++++
T Consensus 8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 87 (281)
T 3svt_A 8 SFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTA 87 (281)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHH
Confidence 34579999999999999999999999999999999998763321 122 67889999999988887765
Q ss_pred ---CccEEEEcCCc-----h----------------------hh----hcccccCCCEEEEecCcccccCCCCcccccch
Q 021854 163 ---GVRSIICPSEG-----F----------------------IS----NAGSLKGVQHVILLSQLSVYRGSGGIQALMKG 208 (306)
Q Consensus 163 ---~~d~vi~~~~g-----~----------------------~~----~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~ 208 (306)
.+|++||+++. . +. ....+.+-.+||++||..++.+..+...|..+
T Consensus 88 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as 167 (281)
T 3svt_A 88 WHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASNTHRWFGAYGVT 167 (281)
T ss_dssp HHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCTTCTHHHHH
T ss_pred HcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEeCHHHcCCCCCChhHHHH
Confidence 57999998442 0 01 11233455699999999988777777677654
Q ss_pred HHHHH--HHHHHHHHHhcCCCEEEEEcCcccCCCCCC----cce--eeecCCCCccccCHHHHHHHHHHHhhCCC--CCC
Q 021854 209 NARKL--AEQDESMLMASGIPYTIIRTGVLQNTPGGK----QGF--QFEEGCAANGSLSKEDAAFICVEALESIP--QTG 278 (306)
Q Consensus 209 ~a~~~--~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~----~~~--~~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g 278 (306)
++... .+.....+...+|+++.|+||++....... ... .+........+.+++|+|++++.++.+.. -.|
T Consensus 168 K~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~~~~l~s~~~~~itG 247 (281)
T 3svt_A 168 KSAVDHLMQLAADELGASWVRVNSIRPGLIRTDLVAAITESAELSSDYAMCTPLPRQGEVEDVANMAMFLLSDAASFVTG 247 (281)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTCHHHHHHHHHHCSSSSCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred HHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcccCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCcccCCCCC
Confidence 43221 111222233568999999999865322100 000 01111222346689999999999997643 368
Q ss_pred cEEEEecCCc-C-HHHHHHHHHHHhhh
Q 021854 279 LIFEVVNGEE-K-VSDWKKCFSRLMEK 303 (306)
Q Consensus 279 ~~~~v~~g~~-s-~~d~~~l~~~l~~~ 303 (306)
+++++.+|.. . ..++.+++..+.+.
T Consensus 248 ~~~~vdgG~~~~~~~~~~~~~~~~~~~ 274 (281)
T 3svt_A 248 QVINVDGGQMLRRGPDFSAMLEPVFGR 274 (281)
T ss_dssp CEEEESTTGGGSCCCCCHHHHHHHHCT
T ss_pred CEEEeCCChhcccCCcchhccccccCC
Confidence 9999998764 2 55677777766544
|
| >2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=7.3e-18 Score=149.50 Aligned_cols=191 Identities=13% Similarity=0.122 Sum_probs=128.7
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhh---hcCCCc-eeeeccCCCHHHHHHHh------cCccE
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYV-ESMAGDASNKKFLKTAL------RGVRS 166 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~---~~~~~v-~~v~~D~~d~~~l~~~~------~~~d~ 166 (306)
..+++++||||+|+||++++++|+++|++|+++.|+.++..+ ..+..+ .++.+|++|.+++++++ .++|+
T Consensus 9 ~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id~ 88 (254)
T 2wsb_A 9 LDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELGAAVAARIVADVTDAEAMTAAAAEAEAVAPVSI 88 (254)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEEECCTTCHHHHHHHHHHHHHHSCCCE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceeEEEEecCCHHHHHHHHHHHHhhCCCcE
Confidence 457899999999999999999999999999999999876432 223355 78999999999888776 47899
Q ss_pred EEEcCCch------------------------------hhhcccccCCCEEEEecCcccccCCCCc--ccccchHHHH--
Q 021854 167 IICPSEGF------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGI--QALMKGNARK-- 212 (306)
Q Consensus 167 vi~~~~g~------------------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~--~~~~~~~a~~-- 212 (306)
+||+++-. +...+++.+.++||++||..++.+.... ..|..+++..
T Consensus 89 li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~Y~~sK~a~~~ 168 (254)
T 2wsb_A 89 LVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARGAGAIVNLGSMSGTIVNRPQFASSYMASKGAVHQ 168 (254)
T ss_dssp EEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSSCBHHHHHHHHHHHH
T ss_pred EEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEecchhccCCCCCcchHHHHHHHHHHH
Confidence 99984310 1112334678899999999887654443 4554433221
Q ss_pred HHHHHHHHHHhcCCCEEEEEcCcccCCCCC----Ccce--eeecCCCCccccCHHHHHHHHHHHhhCCC--CCCcEEEEe
Q 021854 213 LAEQDESMLMASGIPYTIIRTGVLQNTPGG----KQGF--QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVV 284 (306)
Q Consensus 213 ~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~----~~~~--~~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~~~v~ 284 (306)
+.+.....+...++++++||||++...... .... .+........+.+++|+|++++.++.++. ..|+.+++.
T Consensus 169 ~~~~~~~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~ 248 (254)
T 2wsb_A 169 LTRALAAEWAGRGVRVNALAPGYVATEMTLKMRERPELFETWLDMTPMGRCGEPSEIAAAALFLASPAASYVTGAILAVD 248 (254)
T ss_dssp HHHHHHHHHGGGTEEEEEEEECCBCSHHHHHHHTCHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred HHHHHHHHHhhcCeEEEEEEecccCchhhhccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCcccccccCCEEEEC
Confidence 111111222346999999999986432110 0000 00011122347899999999999986542 468899998
Q ss_pred cCC
Q 021854 285 NGE 287 (306)
Q Consensus 285 ~g~ 287 (306)
+|.
T Consensus 249 gG~ 251 (254)
T 2wsb_A 249 GGY 251 (254)
T ss_dssp TTG
T ss_pred CCE
Confidence 764
|
| >2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A | Back alignment and structure |
|---|
Probab=99.76 E-value=7.6e-18 Score=148.77 Aligned_cols=187 Identities=15% Similarity=0.180 Sum_probs=126.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHh-------cCccEEEEc
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTAL-------RGVRSIICP 170 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~-------~~~d~vi~~ 170 (306)
++|+++||||+|+||++++++|+++|++|+++.|+.++..+..+ +.++.+|++| +++++++ .++|++||+
T Consensus 1 ~~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~--~~~~~~D~~~-~~~~~~~~~~~~~~g~id~lv~~ 77 (239)
T 2ekp_A 1 MERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEEAAQSLG--AVPLPTDLEK-DDPKGLVKRALEALGGLHVLVHA 77 (239)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHT--CEEEECCTTT-SCHHHHHHHHHHHHTSCCEEEEC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhhC--cEEEecCCch-HHHHHHHHHHHHHcCCCCEEEEC
Confidence 36899999999999999999999999999999999876444343 7889999998 6665554 478999998
Q ss_pred CCch--------------------------hh----hcccccCCCEEEEecCcccccCC--CCcccccchHHHH--HHHH
Q 021854 171 SEGF--------------------------IS----NAGSLKGVQHVILLSQLSVYRGS--GGIQALMKGNARK--LAEQ 216 (306)
Q Consensus 171 ~~g~--------------------------~~----~~a~~~gvkr~V~iSS~~~~~~~--~~~~~~~~~~a~~--~~~~ 216 (306)
++.. +. ..+.+.+.++||++||..++.+. .+...|..+++.. +.+.
T Consensus 78 Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~Y~~sK~a~~~~~~~ 157 (239)
T 2ekp_A 78 AAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWGRVLFIGSVTTFTAGGPVPIPAYTTAKTALLGLTRA 157 (239)
T ss_dssp CCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTSCCHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhccCCCCCCCccHHHHHHHHHHHHHH
Confidence 4310 01 11234578899999999887655 4555565443321 1122
Q ss_pred HHHHHHhcCCCEEEEEcCcccCCCCC----Ccce--eeecCCCCccccCHHHHHHHHHHHhhCCC--CCCcEEEEecCC
Q 021854 217 DESMLMASGIPYTIIRTGVLQNTPGG----KQGF--QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVNGE 287 (306)
Q Consensus 217 aE~~l~~sgi~~tiiRPg~l~~~~~~----~~~~--~~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~~~v~~g~ 287 (306)
....+...++++++||||++...... .... .+........+.+++|+|++++.++.++. ..|+.+.+.+|.
T Consensus 158 la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~~~~tG~~~~vdgG~ 236 (239)
T 2ekp_A 158 LAKEWARLGIRVNLLCPGYVETEFTLPLRQNPELYEPITARIPMGRWARPEEIARVAAVLCGDEAEYLTGQAVAVDGGF 236 (239)
T ss_dssp HHHHHGGGTEEEEEEEECSBCSGGGHHHHTCHHHHHHHHTTCTTSSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTT
T ss_pred HHHHhhhcCcEEEEEEeCCccCchhhccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCCCCCEEEECCCc
Confidence 22234456999999999986533210 0000 00011122346799999999999987542 468899998774
|
| >3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=6.3e-18 Score=150.06 Aligned_cols=190 Identities=15% Similarity=0.106 Sum_probs=131.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCc-chhhh------hcCCCceeeeccCCCHHHHHHHhc-------C
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK-RNAME------SFGTYVESMAGDASNKKFLKTALR-------G 163 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~-~~~~~------~~~~~v~~v~~D~~d~~~l~~~~~-------~ 163 (306)
++|+++||||+|+||++++++|+++|++|+++.|.. ++..+ ..+.++.++.+|++|.++++++++ +
T Consensus 3 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 82 (246)
T 3osu_A 3 MTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFGS 82 (246)
T ss_dssp CSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 578999999999999999999999999999988754 33211 124578899999999998888776 7
Q ss_pred ccEEEEcCCch--------------------------hhhc----ccccCCCEEEEecCcccccCCCCcccccchHHHH-
Q 021854 164 VRSIICPSEGF--------------------------ISNA----GSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK- 212 (306)
Q Consensus 164 ~d~vi~~~~g~--------------------------~~~~----a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~- 212 (306)
+|++||+++.. +.++ +.+.+.++||++||..++.+..+...|..+++..
T Consensus 83 id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~ 162 (246)
T 3osu_A 83 LDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVI 162 (246)
T ss_dssp CCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHHHHH
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCCCCChHHHHHHHHHH
Confidence 89999984310 1112 2446778999999998887776777776544322
Q ss_pred -HHHHHHHHHHhcCCCEEEEEcCcccCCCCCCc-ce---eeecCCCCccccCHHHHHHHHHHHhhCCC--CCCcEEEEec
Q 021854 213 -LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQ-GF---QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVN 285 (306)
Q Consensus 213 -~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~~-~~---~~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~~~v~~ 285 (306)
+.+.....+...+++++.|+||++........ .. .+........+.+++|+|++++.++.++. -.|+++++.+
T Consensus 163 ~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v~~l~s~~~~~itG~~i~vdg 242 (246)
T 3osu_A 163 GLTKSAARELASRGITVNAVAPGFIVSDMTDALSDELKEQMLTQIPLARFGQDTDIANTVAFLASDKAKYITGQTIHVNG 242 (246)
T ss_dssp HHHHHHHHHHGGGTEEEEEEEECSBGGGCCSCSCHHHHHHHHTTCTTCSCBCHHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred HHHHHHHHHhcccCeEEEEEEECCCcCCcccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCCCCEEEeCC
Confidence 11222222345799999999998653321110 00 01122223446788999999999887543 3589999987
Q ss_pred CC
Q 021854 286 GE 287 (306)
Q Consensus 286 g~ 287 (306)
|-
T Consensus 243 G~ 244 (246)
T 3osu_A 243 GM 244 (246)
T ss_dssp TS
T ss_pred Cc
Confidence 74
|
| >1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=1.2e-17 Score=148.90 Aligned_cols=192 Identities=12% Similarity=0.054 Sum_probs=129.9
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEec-Ccchhhhh------cCCCceeeeccCCCHHHHHHHhc-------
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVK-DKRNAMES------FGTYVESMAGDASNKKFLKTALR------- 162 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R-~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~~~------- 162 (306)
..+++|+||||+|+||++++++|+++|++|+++.| +.++..+. .+.++.++.+|++|.++++++++
T Consensus 5 l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 84 (261)
T 1gee_A 5 LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFG 84 (261)
T ss_dssp GTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 35789999999999999999999999999999999 65543221 23467889999999998888776
Q ss_pred CccEEEEcCCch------------------------------hhhcccccC-CCEEEEecCcccccCCCCcccccchHHH
Q 021854 163 GVRSIICPSEGF------------------------------ISNAGSLKG-VQHVILLSQLSVYRGSGGIQALMKGNAR 211 (306)
Q Consensus 163 ~~d~vi~~~~g~------------------------------~~~~a~~~g-vkr~V~iSS~~~~~~~~~~~~~~~~~a~ 211 (306)
++|+|||+++-. ....+.+.+ .++||++||..++.+..+...|..+++.
T Consensus 85 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a 164 (261)
T 1gee_A 85 KLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGG 164 (261)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhcCCCCCccHHHHHHHH
Confidence 789999984310 011123344 6899999999887766666666554322
Q ss_pred H--HHHHHHHHHHhcCCCEEEEEcCcccCCCCCCc---ce---eeecCCCCccccCHHHHHHHHHHHhhCC--CCCCcEE
Q 021854 212 K--LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQ---GF---QFEEGCAANGSLSKEDAAFICVEALESI--PQTGLIF 281 (306)
Q Consensus 212 ~--~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~~---~~---~~~~g~~~~~~Is~~DVA~~iv~aL~~~--~~~g~~~ 281 (306)
. +.+.....+...++++++||||++........ .. .+........+.+++|+|++++.++.++ ...|+.+
T Consensus 165 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~ 244 (261)
T 1gee_A 165 MKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMGYIGEPEEIAAVAAWLASSEASYVTGITL 244 (261)
T ss_dssp HHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHSHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred HHHHHHHHHHHhcccCeEEEEEeeCCcCCchhhhcccChhHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCCCcEE
Confidence 1 11111222334699999999998653321100 00 0001112234689999999999998753 2468899
Q ss_pred EEecCCc
Q 021854 282 EVVNGEE 288 (306)
Q Consensus 282 ~v~~g~~ 288 (306)
++.+|..
T Consensus 245 ~v~gg~~ 251 (261)
T 1gee_A 245 FADGGMT 251 (261)
T ss_dssp EESTTGG
T ss_pred EEcCCcc
Confidence 9998753
|
| >2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.76 E-value=3e-18 Score=153.73 Aligned_cols=190 Identities=14% Similarity=0.117 Sum_probs=131.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhh---hc-----CCCceeeeccCCCHHHHHHHhc-------
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SF-----GTYVESMAGDASNKKFLKTALR------- 162 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~---~~-----~~~v~~v~~D~~d~~~l~~~~~------- 162 (306)
.+++++||||+|+||++++++|+++|++|+++.|+.++..+ .. +.++.++.+|++|.++++++++
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 85 (267)
T 2gdz_A 6 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFG 85 (267)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHcC
Confidence 46899999999999999999999999999999999865321 11 2357889999999998888775
Q ss_pred CccEEEEcCCch----------------------hhhcccccC---CCEEEEecCcccccCCCCcccccchHHHHH--HH
Q 021854 163 GVRSIICPSEGF----------------------ISNAGSLKG---VQHVILLSQLSVYRGSGGIQALMKGNARKL--AE 215 (306)
Q Consensus 163 ~~d~vi~~~~g~----------------------~~~~a~~~g---vkr~V~iSS~~~~~~~~~~~~~~~~~a~~~--~~ 215 (306)
.+|++||+++.. +...+.+.+ .++||++||..++.+..+...|..+++... .+
T Consensus 86 ~id~lv~~Ag~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~ 165 (267)
T 2gdz_A 86 RLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTR 165 (267)
T ss_dssp CCCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEECCCCCChhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccCCCCCCchHHHHHHHHHHHHH
Confidence 469999984411 112233332 679999999988876666666655443211 11
Q ss_pred H--HHHHHHhcCCCEEEEEcCcccCCCCCC--cceee----------ecCCCCccccCHHHHHHHHHHHhhCCCCCCcEE
Q 021854 216 Q--DESMLMASGIPYTIIRTGVLQNTPGGK--QGFQF----------EEGCAANGSLSKEDAAFICVEALESIPQTGLIF 281 (306)
Q Consensus 216 ~--aE~~l~~sgi~~tiiRPg~l~~~~~~~--~~~~~----------~~g~~~~~~Is~~DVA~~iv~aL~~~~~~g~~~ 281 (306)
. .+..+...++++++|+||++....... ..... ........+++++|+|++++.++.++...|+++
T Consensus 166 ~~ala~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~v~~l~s~~~~~G~~~ 245 (267)
T 2gdz_A 166 SAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPPLIANGLITLIEDDALNGAIM 245 (267)
T ss_dssp HHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHHHHHHHCCBCHHHHHHHHHHHHHCTTCSSCEE
T ss_pred HHHHHHHhccCCcEEEEEecCcCcchhhhccccccccchhhhHHHHHHHHhccccCCCHHHHHHHHHHHhcCcCCCCcEE
Confidence 1 123345679999999999864321000 00000 000011246799999999999998877789999
Q ss_pred EEecCC
Q 021854 282 EVVNGE 287 (306)
Q Consensus 282 ~v~~g~ 287 (306)
++.++.
T Consensus 246 ~v~gg~ 251 (267)
T 2gdz_A 246 KITTSK 251 (267)
T ss_dssp EEETTT
T ss_pred EecCCC
Confidence 999866
|
| >3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.76 E-value=8.7e-18 Score=148.78 Aligned_cols=191 Identities=14% Similarity=0.091 Sum_probs=133.8
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh------cCCCceeeeccCCCHHHHHHHhc-------C
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------G 163 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~~~-------~ 163 (306)
..+|+++||||+|+||++++++|+++|++|+++.|+.++..+. .+.++.++.+|++|.++++++++ .
T Consensus 3 l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (247)
T 3lyl_A 3 LNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAENLA 82 (247)
T ss_dssp TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTTCC
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 3578999999999999999999999999999999998763321 24578899999999998888775 4
Q ss_pred ccEEEEcCCch--------------------------hh----hcccccCCCEEEEecCcccccCCCCcccccchHHHH-
Q 021854 164 VRSIICPSEGF--------------------------IS----NAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK- 212 (306)
Q Consensus 164 ~d~vi~~~~g~--------------------------~~----~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~- 212 (306)
+|++||+++-. +. ....+.+..+||++||..++.+..+...|..+++..
T Consensus 83 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~ 162 (247)
T 3lyl_A 83 IDILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKRWGRIISIGSVVGSAGNPGQTNYCAAKAGVI 162 (247)
T ss_dssp CSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHHHHH
T ss_pred CCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCCCCcHHHHHHHHHHH
Confidence 69999984310 11 112335667999999998887776666776544321
Q ss_pred -HHHHHHHHHHhcCCCEEEEEcCcccCCCCCCc-c---eeeecCCCCccccCHHHHHHHHHHHhhCCC--CCCcEEEEec
Q 021854 213 -LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQ-G---FQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVN 285 (306)
Q Consensus 213 -~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~~-~---~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~~~v~~ 285 (306)
+.+.....+...+++++.|+||++........ . ..+........+.+++|+|++++.++.+.. ..|+++++.+
T Consensus 163 ~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~~~~~~tG~~i~vdg 242 (247)
T 3lyl_A 163 GFSKSLAYEVASRNITVNVVAPGFIATDMTDKLTDEQKSFIATKIPSGQIGEPKDIAAAVAFLASEEAKYITGQTLHVNG 242 (247)
T ss_dssp HHHHHHHHHHGGGTEEEEEEEECSBCCTTTTTSCHHHHHHHHTTSTTCCCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred HHHHHHHHHHHHcCeEEEEEeeCcEecccchhccHHHHHHHhhcCCCCCCcCHHHHHHHHHHHhCCCcCCccCCEEEECC
Confidence 11222222345789999999998654322110 0 011122233457899999999999986543 4689999987
Q ss_pred CC
Q 021854 286 GE 287 (306)
Q Consensus 286 g~ 287 (306)
|-
T Consensus 243 G~ 244 (247)
T 3lyl_A 243 GM 244 (247)
T ss_dssp TS
T ss_pred CE
Confidence 74
|
| >3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.76 E-value=1.9e-17 Score=149.65 Aligned_cols=191 Identities=13% Similarity=0.114 Sum_probs=131.7
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcc------------hhh------hhcCCCceeeeccCCCHHHHH
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR------------NAM------ESFGTYVESMAGDASNKKFLK 158 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~------------~~~------~~~~~~v~~v~~D~~d~~~l~ 158 (306)
..+|+++||||+|+||++++++|+++|++|+++.|+.. ... ...+.++.++.+|++|.++++
T Consensus 8 l~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~ 87 (281)
T 3s55_A 8 FEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAALE 87 (281)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHH
Confidence 45799999999999999999999999999999999732 111 123457889999999999888
Q ss_pred HHhc-------CccEEEEcCCch--------------------------hhh----cccccCCCEEEEecCcccccCCCC
Q 021854 159 TALR-------GVRSIICPSEGF--------------------------ISN----AGSLKGVQHVILLSQLSVYRGSGG 201 (306)
Q Consensus 159 ~~~~-------~~d~vi~~~~g~--------------------------~~~----~a~~~gvkr~V~iSS~~~~~~~~~ 201 (306)
++++ ++|++||+++.. +.+ .+.+.+..+||++||..++.+..+
T Consensus 88 ~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~ 167 (281)
T 3s55_A 88 SFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHSANFA 167 (281)
T ss_dssp HHHHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCTT
T ss_pred HHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhcCCCCC
Confidence 8775 789999984310 111 133456789999999998877777
Q ss_pred cccccchHHHH--HHHHHHHHHHhcCCCEEEEEcCcccCCCCCCc----cee--e-------------ecCCCCccccCH
Q 021854 202 IQALMKGNARK--LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQ----GFQ--F-------------EEGCAANGSLSK 260 (306)
Q Consensus 202 ~~~~~~~~a~~--~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~~----~~~--~-------------~~g~~~~~~Is~ 260 (306)
...|..+++.. +.+.....+...||+++.|+||++........ ... + ........+.++
T Consensus 168 ~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 247 (281)
T 3s55_A 168 QASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKPTLKDVESVFASLHLQYAPFLKP 247 (281)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSTTTSSHHHHHC-------CCHHHHHHHHHHHCSSSCSCBCH
T ss_pred CchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccccchhhhccccccccccchhHHHHHHHhhhccCcCCCCH
Confidence 66775543321 11111122234689999999998653322110 000 0 011122457899
Q ss_pred HHHHHHHHHHhhCCC--CCCcEEEEecCC
Q 021854 261 EDAAFICVEALESIP--QTGLIFEVVNGE 287 (306)
Q Consensus 261 ~DVA~~iv~aL~~~~--~~g~~~~v~~g~ 287 (306)
+|||++++.++.+.. -.|++++|.+|.
T Consensus 248 ~dvA~~v~~L~s~~~~~itG~~i~vdgG~ 276 (281)
T 3s55_A 248 EEVTRAVLFLVDEASSHITGTVLPIDAGA 276 (281)
T ss_dssp HHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred HHHHHHHHHHcCCcccCCCCCEEEECCCc
Confidence 999999999997653 458999999875
|
| >1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.76 E-value=1.1e-17 Score=149.22 Aligned_cols=189 Identities=13% Similarity=0.068 Sum_probs=130.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhh---hcCCCceeeeccCCCHHHHHHHhc-------CccEE
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALR-------GVRSI 167 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~---~~~~~v~~v~~D~~d~~~l~~~~~-------~~d~v 167 (306)
.+|+++||||+|+||++++++|+++|++|+++.|+.++..+ ..+.++.++.+|++|.++++++++ .+|++
T Consensus 5 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~l 84 (253)
T 1hxh_A 5 QGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNVL 84 (253)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCEE
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 57899999999999999999999999999999998876432 234578899999999988887765 46999
Q ss_pred EEcCCch------------------------------hhhcccccCCCEEEEecCcccccCCCCcccccchHHHH--HHH
Q 021854 168 ICPSEGF------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK--LAE 215 (306)
Q Consensus 168 i~~~~g~------------------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~--~~~ 215 (306)
||+++-. +...+++.+ ++||++||..++.+..+...|..+++.. +.+
T Consensus 85 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~ 163 (253)
T 1hxh_A 85 VNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG-GSIINMASVSSWLPIEQYAGYSASKAAVSALTR 163 (253)
T ss_dssp EECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC-EEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHH
T ss_pred EECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcC-CEEEEEcchhhcCCCCCCccHHHHHHHHHHHHH
Confidence 9984310 112234456 8999999999887766666675544321 111
Q ss_pred HHHHHHHhc--CCCEEEEEcCcccCCCCC---Ccce--e-eec---CCCCccccCHHHHHHHHHHHhhCCC--CCCcEEE
Q 021854 216 QDESMLMAS--GIPYTIIRTGVLQNTPGG---KQGF--Q-FEE---GCAANGSLSKEDAAFICVEALESIP--QTGLIFE 282 (306)
Q Consensus 216 ~aE~~l~~s--gi~~tiiRPg~l~~~~~~---~~~~--~-~~~---g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~~~ 282 (306)
.....+... ++++++||||++...... .... . +.. ......+.+++|+|++++.++.++. ..|+.+.
T Consensus 164 ~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~~~~tG~~~~ 243 (253)
T 1hxh_A 164 AAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGVSKEMVLHDPKLNRAGRAYMPERIAQLVLFLASDESSVMSGSELH 243 (253)
T ss_dssp HHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTTCCHHHHBCBTTTBTTCCEECHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred HHHHHhhhcCCCeEEEEEEeCCccCchhhhccchhhhHHHHhhhhccCccCCCCCHHHHHHHHHHHcCccccCCCCcEEE
Confidence 122223334 899999999986422100 0000 0 101 1122346789999999999997653 4688999
Q ss_pred EecCC
Q 021854 283 VVNGE 287 (306)
Q Consensus 283 v~~g~ 287 (306)
+.+|.
T Consensus 244 vdgG~ 248 (253)
T 1hxh_A 244 ADNSI 248 (253)
T ss_dssp ESSSC
T ss_pred ECCCc
Confidence 98775
|
| >2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=4.6e-18 Score=153.76 Aligned_cols=191 Identities=11% Similarity=0.107 Sum_probs=131.0
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh------cCCCceeeeccCCCHHHHHHHhc-------C
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------G 163 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~~~-------~ 163 (306)
..+++++||||+|+||++++++|+++|++|+++.|+.++..+. .+.++.++.+|++|.++++++++ +
T Consensus 20 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 99 (277)
T 2rhc_B 20 QDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGP 99 (277)
T ss_dssp TTSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCS
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence 4578999999999999999999999999999999998663321 14568889999999998887775 6
Q ss_pred ccEEEEcCCc----h----------------------hhhc------ccccCCCEEEEecCcccccCCCCcccccchHHH
Q 021854 164 VRSIICPSEG----F----------------------ISNA------GSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR 211 (306)
Q Consensus 164 ~d~vi~~~~g----~----------------------~~~~------a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~ 211 (306)
+|++||+++- . +.++ +.+.+.++||++||..++.+......|..+++.
T Consensus 100 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a 179 (277)
T 2rhc_B 100 VDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHG 179 (277)
T ss_dssp CSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHTEEEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcCCeEEEEECccccccCCCCCccHHHHHHH
Confidence 8999998431 0 1111 223366899999999887766566666554332
Q ss_pred H--HHHHHHHHHHhcCCCEEEEEcCcccCCCCCC------c------ce---eeecCCCCccccCHHHHHHHHHHHhhCC
Q 021854 212 K--LAEQDESMLMASGIPYTIIRTGVLQNTPGGK------Q------GF---QFEEGCAANGSLSKEDAAFICVEALESI 274 (306)
Q Consensus 212 ~--~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~------~------~~---~~~~g~~~~~~Is~~DVA~~iv~aL~~~ 274 (306)
. +.+.....+...++++++|+||++....... . .. .+........+++++|+|++++.++.++
T Consensus 180 ~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dvA~~v~~l~s~~ 259 (277)
T 2rhc_B 180 VVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAYLIGPG 259 (277)
T ss_dssp HHHHHHHHHHHHTTTEEEEEEEEECSBCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGG
T ss_pred HHHHHHHHHHHHHHhCcEEEEEecCcCcCchhhhhhhhcccccccchHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCch
Confidence 1 1122222233468999999999865321100 0 00 0001112234789999999999999764
Q ss_pred C--CCCcEEEEecCC
Q 021854 275 P--QTGLIFEVVNGE 287 (306)
Q Consensus 275 ~--~~g~~~~v~~g~ 287 (306)
. ..|+++++.+|.
T Consensus 260 ~~~~tG~~~~vdGG~ 274 (277)
T 2rhc_B 260 AAAVTAQALNVCGGL 274 (277)
T ss_dssp GTTCCSCEEEESTTC
T ss_pred hcCCCCcEEEECCCc
Confidence 3 468999998875
|
| >3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} | Back alignment and structure |
|---|
Probab=99.76 E-value=9.6e-18 Score=143.82 Aligned_cols=161 Identities=14% Similarity=0.089 Sum_probs=115.4
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcC---ccEEEEcCCch--
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRG---VRSIICPSEGF-- 174 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~---~d~vi~~~~g~-- 174 (306)
|+|+||||+|+||++++++|+ +|++|+++.|+.+ .+.+|++|.+++++++++ +|+|||+++..
T Consensus 4 M~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~-----------~~~~D~~~~~~~~~~~~~~~~~d~vi~~ag~~~~ 71 (202)
T 3d7l_A 4 MKILLIGASGTLGSAVKERLE-KKAEVITAGRHSG-----------DVTVDITNIDSIKKMYEQVGKVDAIVSATGSATF 71 (202)
T ss_dssp CEEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS-----------SEECCTTCHHHHHHHHHHHCCEEEEEECCCCCCC
T ss_pred cEEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc-----------ceeeecCCHHHHHHHHHHhCCCCEEEECCCCCCC
Confidence 589999999999999999999 9999999999874 578999999999988875 79999984310
Q ss_pred ------------------------hhhccccc---CCCEEEEecCcccccCCCCcccccchHHHHHHHHHHHHHH-----
Q 021854 175 ------------------------ISNAGSLK---GVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLM----- 222 (306)
Q Consensus 175 ------------------------~~~~a~~~---gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~~~~~aE~~l~----- 222 (306)
+.+++... + ++||++||..++.+..+...|..+ |...|.+.+
T Consensus 72 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~iv~~sS~~~~~~~~~~~~Y~~s-----K~~~~~~~~~~~~e 145 (202)
T 3d7l_A 72 SPLTELTPEKNAVTISSKLGGQINLVLLGIDSLNDK-GSFTLTTGIMMEDPIVQGASAAMA-----NGAVTAFAKSAAIE 145 (202)
T ss_dssp CCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEEE-EEEEEECCGGGTSCCTTCHHHHHH-----HHHHHHHHHHHTTS
T ss_pred CChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhccC-CEEEEEcchhhcCCCCccHHHHHH-----HHHHHHHHHHHHHH
Confidence 11222222 3 799999999887665555555433 333343333
Q ss_pred -hcCCCEEEEEcCcccCCCCCCcceeeecCCCCccccCHHHHHHHHHHHhhCCCCCCcEEEEe
Q 021854 223 -ASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVV 284 (306)
Q Consensus 223 -~sgi~~tiiRPg~l~~~~~~~~~~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~~~g~~~~v~ 284 (306)
..++++++||||++...... .........+++++|+|++++.++. ....|++|++.
T Consensus 146 ~~~gi~v~~v~pg~v~~~~~~-----~~~~~~~~~~~~~~dva~~~~~~~~-~~~~G~~~~vd 202 (202)
T 3d7l_A 146 MPRGIRINTVSPNVLEESWDK-----LEPFFEGFLPVPAAKVARAFEKSVF-GAQTGESYQVY 202 (202)
T ss_dssp CSTTCEEEEEEECCBGGGHHH-----HGGGSTTCCCBCHHHHHHHHHHHHH-SCCCSCEEEEC
T ss_pred ccCCeEEEEEecCccCCchhh-----hhhhccccCCCCHHHHHHHHHHhhh-ccccCceEecC
Confidence 24899999999986533210 1111223568999999999998884 44567888863
|
| >4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A | Back alignment and structure |
|---|
Probab=99.76 E-value=1.9e-17 Score=148.95 Aligned_cols=192 Identities=14% Similarity=0.111 Sum_probs=132.2
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchh-h------hhcCCCceeeeccCCCHHHHHHHhc------
Q 021854 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-M------ESFGTYVESMAGDASNKKFLKTALR------ 162 (306)
Q Consensus 96 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~-~------~~~~~~v~~v~~D~~d~~~l~~~~~------ 162 (306)
...+|+|+||||+|+||++++++|+++|++|+++.|+.+.. . ...+.++.++.+|++|.++++++++
T Consensus 26 ~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 105 (271)
T 4iin_A 26 QFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIVQSD 105 (271)
T ss_dssp CCSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhc
Confidence 34579999999999999999999999999999999965431 1 1224578899999999988887775
Q ss_pred -CccEEEEcCCch------------------------------hhhcccccCCCEEEEecCcccccCCCCcccccchHHH
Q 021854 163 -GVRSIICPSEGF------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR 211 (306)
Q Consensus 163 -~~d~vi~~~~g~------------------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~ 211 (306)
++|++||+++.. +...+++.+..+||++||..+..+..+...|..+++.
T Consensus 106 g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a 185 (271)
T 4iin_A 106 GGLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSRFGSVVNVASIIGERGNMGQTNYSASKGG 185 (271)
T ss_dssp SSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHHH
T ss_pred CCCCEEEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEechhhcCCCCCchHhHHHHHH
Confidence 789999984410 1112234567899999999888777676677654432
Q ss_pred HH--HHHHHHHHHhcCCCEEEEEcCcccCCCCCCc----ceeeecCCCCccccCHHHHHHHHHHHhhCCC--CCCcEEEE
Q 021854 212 KL--AEQDESMLMASGIPYTIIRTGVLQNTPGGKQ----GFQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEV 283 (306)
Q Consensus 212 ~~--~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~~----~~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~~~v 283 (306)
.. .+.....+...+++++.|+||++........ ...+........+.+++|+|++++.++.++. ..|+++++
T Consensus 186 ~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~p~dvA~~i~~l~s~~~~~itG~~i~v 265 (271)
T 4iin_A 186 MIAMSKSFAYEGALRNIRFNSVTPGFIETDMNANLKDELKADYVKNIPLNRLGSAKEVAEAVAFLLSDHSSYITGETLKV 265 (271)
T ss_dssp HHHHHHHHHHHHHTTTEEEEEEEECSBCCC------------CGGGCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEE
T ss_pred HHHHHHHHHHHHHHhCcEEEEEEeCcccCCchhhhcHHHHHHHHhcCCcCCCcCHHHHHHHHHHHhCCCcCCCcCCEEEe
Confidence 21 1112222345789999999998653321110 0011112222456789999999999997643 46899999
Q ss_pred ecCC
Q 021854 284 VNGE 287 (306)
Q Consensus 284 ~~g~ 287 (306)
.+|-
T Consensus 266 dGG~ 269 (271)
T 4iin_A 266 NGGL 269 (271)
T ss_dssp STTS
T ss_pred CCCe
Confidence 8764
|
| >3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=4.3e-18 Score=151.00 Aligned_cols=192 Identities=14% Similarity=0.146 Sum_probs=129.3
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecC-cchhhhh------cCCCceeeeccCCCHHHHHHHhc-------
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKD-KRNAMES------FGTYVESMAGDASNKKFLKTALR------- 162 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~-~~~~~~~------~~~~v~~v~~D~~d~~~l~~~~~------- 162 (306)
..+++|+||||+|+||++++++|+++|++|+++.|+ .++..+. .+.++.++.+|++|.++++++++
T Consensus 5 l~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 84 (258)
T 3afn_B 5 LKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFVAKFG 84 (258)
T ss_dssp GTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 357899999999999999999999999999999998 6543221 14568899999999999988887
Q ss_pred CccEEEEcCCc------h---------------------hhh----cccccC--C---CEEEEecCccccc-CCCCcccc
Q 021854 163 GVRSIICPSEG------F---------------------ISN----AGSLKG--V---QHVILLSQLSVYR-GSGGIQAL 205 (306)
Q Consensus 163 ~~d~vi~~~~g------~---------------------~~~----~a~~~g--v---kr~V~iSS~~~~~-~~~~~~~~ 205 (306)
++|+|||+++. . +.+ .+.+.+ . ++||++||..++. +..+...|
T Consensus 85 ~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~Y 164 (258)
T 3afn_B 85 GIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTGGGPGAGLY 164 (258)
T ss_dssp SCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHHHCCCTTCHHH
T ss_pred CCCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhccCCCCCchHH
Confidence 78999998442 0 000 111222 2 7999999988776 55555556
Q ss_pred cchHHHHH--HHHHHHHHHhcCCCEEEEEcCcccCCCCCCc-c-e--eeecCCCCccccCHHHHHHHHHHHhhCC---CC
Q 021854 206 MKGNARKL--AEQDESMLMASGIPYTIIRTGVLQNTPGGKQ-G-F--QFEEGCAANGSLSKEDAAFICVEALESI---PQ 276 (306)
Q Consensus 206 ~~~~a~~~--~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~~-~-~--~~~~g~~~~~~Is~~DVA~~iv~aL~~~---~~ 276 (306)
..+++... .+.....+...++++++||||++........ . . .+..+.....+++++|+|++++.++.++ ..
T Consensus 165 ~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~ 244 (258)
T 3afn_B 165 GAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAFHADKTQDVRDRISNGIPMGRFGTAEEMAPAFLFFASHLASGYI 244 (258)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSGGGTTCCHHHHHHHHTTCTTCSCBCGGGTHHHHHHHHCHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHhhcccCeEEEEEeCCCcccccccccCHHHHHHHhccCCCCcCCCHHHHHHHHHHHhCcchhccc
Confidence 54432211 1111112234589999999998653321110 0 0 0111222345789999999999999754 23
Q ss_pred CCcEEEEecCCc
Q 021854 277 TGLIFEVVNGEE 288 (306)
Q Consensus 277 ~g~~~~v~~g~~ 288 (306)
.|++|++.+|..
T Consensus 245 ~G~~~~v~gg~~ 256 (258)
T 3afn_B 245 TGQVLDINGGQY 256 (258)
T ss_dssp CSEEEEESTTSS
T ss_pred cCCEEeECCCcc
Confidence 688999998753
|
| >3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.76 E-value=9e-18 Score=150.62 Aligned_cols=192 Identities=16% Similarity=0.156 Sum_probs=132.0
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh------cC-CCceeeeccCCCHHHHHHHhc-------
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FG-TYVESMAGDASNKKFLKTALR------- 162 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~------~~-~~v~~v~~D~~d~~~l~~~~~------- 162 (306)
..+|+++||||+|+||++++++|+++|++|+++.|+.++..+. .+ .++.++.+|++|.++++++++
T Consensus 8 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 87 (262)
T 3pk0_A 8 LQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEEFG 87 (262)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence 4579999999999999999999999999999999998763321 12 478899999999998887765
Q ss_pred CccEEEEcCCch--------------------------h----hhcccccCCCEEEEecCcccc-cCCCCcccccchHHH
Q 021854 163 GVRSIICPSEGF--------------------------I----SNAGSLKGVQHVILLSQLSVY-RGSGGIQALMKGNAR 211 (306)
Q Consensus 163 ~~d~vi~~~~g~--------------------------~----~~~a~~~gvkr~V~iSS~~~~-~~~~~~~~~~~~~a~ 211 (306)
++|++||+++.. + ...+++.+..+||++||..+. .+..+...|..+++.
T Consensus 88 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~Y~asK~a 167 (262)
T 3pk0_A 88 GIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGSGRVVLTSSITGPITGYPGWSHYGATKAA 167 (262)
T ss_dssp CCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCEEEEECCSBTTTBCCTTCHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCCCCCChhhHHHHHH
Confidence 789999984410 1 112334577899999998875 555555566554332
Q ss_pred H--HHHHHHHHHHhcCCCEEEEEcCcccCCCC--CCcce--eeecCCCCccccCHHHHHHHHHHHhhCCC--CCCcEEEE
Q 021854 212 K--LAEQDESMLMASGIPYTIIRTGVLQNTPG--GKQGF--QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEV 283 (306)
Q Consensus 212 ~--~~~~aE~~l~~sgi~~tiiRPg~l~~~~~--~~~~~--~~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~~~v 283 (306)
. +.+.....+...|++++.|+||++..... ..... .+........+.+++|+|+++++++.+.. ..|+++.+
T Consensus 168 ~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v~~L~s~~~~~itG~~i~v 247 (262)
T 3pk0_A 168 QLGFMRTAAIELAPHKITVNAIMPGNIMTEGLLENGEEYIASMARSIPAGALGTPEDIGHLAAFLATKEAGYITGQAIAV 247 (262)
T ss_dssp HHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHTTCHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEE
T ss_pred HHHHHHHHHHHHHhhCcEEEEEEeCcCcCccccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCcCCEEEE
Confidence 1 11222222334799999999998643211 00000 01111222346789999999999987543 56899999
Q ss_pred ecCCc
Q 021854 284 VNGEE 288 (306)
Q Consensus 284 ~~g~~ 288 (306)
.+|..
T Consensus 248 dGG~~ 252 (262)
T 3pk0_A 248 DGGQV 252 (262)
T ss_dssp STTTT
T ss_pred CCCee
Confidence 98763
|
| >3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} | Back alignment and structure |
|---|
Probab=99.76 E-value=2.7e-17 Score=147.90 Aligned_cols=192 Identities=12% Similarity=0.077 Sum_probs=130.6
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCc-chhhh------hcCCCceeeeccCCCHHHHHHHhc------
Q 021854 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK-RNAME------SFGTYVESMAGDASNKKFLKTALR------ 162 (306)
Q Consensus 96 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~-~~~~~------~~~~~v~~v~~D~~d~~~l~~~~~------ 162 (306)
...+++++||||+|+||++++++|+++|++|+++.|.. +...+ ..+.++.++.+|++|.++++++++
T Consensus 22 ~~~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 101 (269)
T 3gk3_A 22 MQAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLADF 101 (269)
T ss_dssp --CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred hhcCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence 34578999999999999999999999999999998544 33211 124578999999999998887775
Q ss_pred -CccEEEEcCCch------------------------------hhhcccccCCCEEEEecCcccccCCCCcccccchHHH
Q 021854 163 -GVRSIICPSEGF------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR 211 (306)
Q Consensus 163 -~~d~vi~~~~g~------------------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~ 211 (306)
.+|++||+++.. +...+.+.+..+||++||..++.+..+...|..+++.
T Consensus 102 g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa 181 (269)
T 3gk3_A 102 GKVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNGSRGAFGQANYASAKAG 181 (269)
T ss_dssp SCCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTBHHHHHHHHH
T ss_pred CCCCEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEeCChhhccCCCCcchHHHHHHH
Confidence 789999984410 0111234566899999999888777676677654432
Q ss_pred H--HHHHHHHHHHhcCCCEEEEEcCcccCCCCCCc--ce---eeecCCCCccccCHHHHHHHHHHHhhCCC--CCCcEEE
Q 021854 212 K--LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQ--GF---QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFE 282 (306)
Q Consensus 212 ~--~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~~--~~---~~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~~~ 282 (306)
. +.+.....+...+++++.|+||++........ .. .+........+.+++|+|++++.++.+.. ..|++++
T Consensus 182 ~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~dvA~~v~~L~s~~~~~itG~~i~ 261 (269)
T 3gk3_A 182 IHGFTKTLALETAKRGITVNTVSPGYLATAMVEAVPQDVLEAKILPQIPVGRLGRPDEVAALIAFLCSDDAGFVTGADLA 261 (269)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTC-------CCSGGGCTTSSCBCHHHHHHHHHHHTSTTCTTCCSCEEE
T ss_pred HHHHHHHHHHHhhhcCCEEEEEecCcccchhhhhhchhHHHHHhhhcCCcCCccCHHHHHHHHHHHhCCCcCCeeCcEEE
Confidence 1 11222222344689999999998653322110 00 11111222345689999999999987654 4689999
Q ss_pred EecCC
Q 021854 283 VVNGE 287 (306)
Q Consensus 283 v~~g~ 287 (306)
+.+|.
T Consensus 262 vdgG~ 266 (269)
T 3gk3_A 262 INGGM 266 (269)
T ss_dssp ESTTS
T ss_pred ECCCE
Confidence 99875
|
| >3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=3.4e-17 Score=146.09 Aligned_cols=188 Identities=13% Similarity=0.094 Sum_probs=130.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhc--CCCceeeeccCCCHHHHHHHh-------cCccEEE
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF--GTYVESMAGDASNKKFLKTAL-------RGVRSII 168 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~--~~~v~~v~~D~~d~~~l~~~~-------~~~d~vi 168 (306)
|+|+|+||||+++||+++++.|+++|++|+++.|+.++..+.. ..++..+.+|++|++++++++ ..+|++|
T Consensus 1 MnK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iDiLV 80 (247)
T 3ged_A 1 MNRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKERPNLFYFHGDVADPLTLKKFVEYAMEKLQRIDVLV 80 (247)
T ss_dssp -CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEE
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 5699999999999999999999999999999999987754332 347888999999998877665 3679999
Q ss_pred EcCCch------------------------------hhhcccccCCCEEEEecCcccccCCCCcccccchHHHH--HHHH
Q 021854 169 CPSEGF------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK--LAEQ 216 (306)
Q Consensus 169 ~~~~g~------------------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~--~~~~ 216 (306)
++++.. ....+.+.+ .++|++||..+..+......|..+++.- +.+.
T Consensus 81 NNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~-G~IInisS~~~~~~~~~~~~Y~asKaal~~ltk~ 159 (247)
T 3ged_A 81 NNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNK-GRIINIASTRAFQSEPDSEAYASAKGGIVALTHA 159 (247)
T ss_dssp ECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHH
T ss_pred ECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CcEEEEeecccccCCCCCHHHHHHHHHHHHHHHH
Confidence 884310 111123334 7999999999988777777776654321 2222
Q ss_pred HHHHHHhcCCCEEEEEcCcccCCCCCCcceeeecCCCCccccCHHHHHHHHHHHhhCCCCCCcEEEEecCC
Q 021854 217 DESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVVNGE 287 (306)
Q Consensus 217 aE~~l~~sgi~~tiiRPg~l~~~~~~~~~~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~~~g~~~~v~~g~ 287 (306)
....+. .+|++..|.||++...................-+-.++|||.++++++.+..-.|+++.|.+|-
T Consensus 160 lA~ela-~~IrVN~I~PG~i~t~~~~~~~~~~~~~~Pl~R~g~pediA~~v~fL~s~~~iTG~~i~VDGG~ 229 (247)
T 3ged_A 160 LAMSLG-PDVLVNCIAPGWINVTEQQEFTQEDCAAIPAGKVGTPKDISNMVLFLCQQDFITGETIIVDGGM 229 (247)
T ss_dssp HHHHHT-TTSEEEEEEECSBCCCC---CCHHHHHTSTTSSCBCHHHHHHHHHHHHHCSSCCSCEEEESTTG
T ss_pred HHHHHC-CCCEEEEEecCcCCCCCcHHHHHHHHhcCCCCCCcCHHHHHHHHHHHHhCCCCCCCeEEECcCH
Confidence 222233 4899999999986432211110000011122335688999999999998665679999998774
|
| >3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} | Back alignment and structure |
|---|
Probab=99.75 E-value=1.8e-17 Score=148.02 Aligned_cols=189 Identities=16% Similarity=0.117 Sum_probs=129.8
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcch--hhhh------cCCCceeeeccCCCHHHHHHHhc-------C
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN--AMES------FGTYVESMAGDASNKKFLKTALR-------G 163 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~--~~~~------~~~~v~~v~~D~~d~~~l~~~~~-------~ 163 (306)
+|+++||||+|+||++++++|+++|++|+++.|+.++ ..+. .+.++.++.+|++|.++++++++ +
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 81 (258)
T 3a28_C 2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKLGG 81 (258)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHTC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 6899999999999999999999999999999998765 3221 13468889999999998887775 7
Q ss_pred ccEEEEcCCch--------------------------hh----hcccccCC-CEEEEecCcccccCCCCcccccchHHHH
Q 021854 164 VRSIICPSEGF--------------------------IS----NAGSLKGV-QHVILLSQLSVYRGSGGIQALMKGNARK 212 (306)
Q Consensus 164 ~d~vi~~~~g~--------------------------~~----~~a~~~gv-kr~V~iSS~~~~~~~~~~~~~~~~~a~~ 212 (306)
+|++||+++.. +. ..+.+.+. ++||++||..++.+......|..+++..
T Consensus 82 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~ 161 (258)
T 3a28_C 82 FDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINAASIAAIQGFPILSAYSTTKFAV 161 (258)
T ss_dssp CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGTSCCTTCHHHHHHHHHH
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEEECcchhccCCCCchhHHHHHHHH
Confidence 89999984310 11 11223466 8999999998877666666665543321
Q ss_pred --HHHHHHHHHHhcCCCEEEEEcCcccCCCCC-----------C--cce--eeecCCCCccccCHHHHHHHHHHHhhCCC
Q 021854 213 --LAEQDESMLMASGIPYTIIRTGVLQNTPGG-----------K--QGF--QFEEGCAANGSLSKEDAAFICVEALESIP 275 (306)
Q Consensus 213 --~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~-----------~--~~~--~~~~g~~~~~~Is~~DVA~~iv~aL~~~~ 275 (306)
+.+.....+...++++++|+||++...... . ... .+........+.+++|+|++++.++.++.
T Consensus 162 ~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~~~ 241 (258)
T 3a28_C 162 RGLTQAAAQELAPKGHTVNAYAPGIVGTGMWEQIDAELSKINGKPIGENFKEYSSSIALGRPSVPEDVAGLVSFLASENS 241 (258)
T ss_dssp HHHHHHHHHHHGGGTCEEEEEEECCBCSHHHHHHHHHHHHHHCCCTTHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGG
T ss_pred HHHHHHHHHHHHhhCeEEEEEECCccCChhhhhhhhhhccccCCchHHHHHHHHhcCCCCCccCHHHHHHHHHHHhCccc
Confidence 112222223457999999999986422100 0 000 01011122346789999999999997543
Q ss_pred --CCCcEEEEecCC
Q 021854 276 --QTGLIFEVVNGE 287 (306)
Q Consensus 276 --~~g~~~~v~~g~ 287 (306)
..|+.+.+.+|.
T Consensus 242 ~~~tG~~i~vdGG~ 255 (258)
T 3a28_C 242 NYVTGQVMLVDGGM 255 (258)
T ss_dssp TTCCSCEEEESSSS
T ss_pred CCCCCCEEEECCCE
Confidence 468899998764
|
| >4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=1.2e-17 Score=150.49 Aligned_cols=192 Identities=14% Similarity=0.105 Sum_probs=132.9
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCc-chhhh------hcCCCceeeeccCCCHHHHHHHhc------
Q 021854 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK-RNAME------SFGTYVESMAGDASNKKFLKTALR------ 162 (306)
Q Consensus 96 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~-~~~~~------~~~~~v~~v~~D~~d~~~l~~~~~------ 162 (306)
...+|+++||||+|+||++++++|+++|++|+++.|.. +...+ ..+..+.++.+|++|.++++++++
T Consensus 25 ~l~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~ 104 (269)
T 4dmm_A 25 PLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIERW 104 (269)
T ss_dssp TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 34579999999999999999999999999999998844 33211 124578899999999998887775
Q ss_pred -CccEEEEcCCch--------------------------hh----hcccccCCCEEEEecCcccccCCCCcccccchHHH
Q 021854 163 -GVRSIICPSEGF--------------------------IS----NAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR 211 (306)
Q Consensus 163 -~~d~vi~~~~g~--------------------------~~----~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~ 211 (306)
.+|++||+++.. +. ..+.+.+..+||++||..+..+..+...|..+++.
T Consensus 105 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a 184 (269)
T 4dmm_A 105 GRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSGRIINIASVVGEMGNPGQANYSAAKAG 184 (269)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCHHHHHCCTTCHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCCCCchhHHHHHHH
Confidence 689999984311 11 11244567899999999888776666677654432
Q ss_pred H--HHHHHHHHHHhcCCCEEEEEcCcccCCCCCCcc-eeeecCCCCccccCHHHHHHHHHHHhhCCC---CCCcEEEEec
Q 021854 212 K--LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQG-FQFEEGCAANGSLSKEDAAFICVEALESIP---QTGLIFEVVN 285 (306)
Q Consensus 212 ~--~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~~~-~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~---~~g~~~~v~~ 285 (306)
. +.+.....+...|++++.|+||++......... ..+........+.+++|+|++++.++.++. -.|++++|.+
T Consensus 185 ~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~p~~r~~~~~dvA~~v~~l~s~~~~~~itG~~i~vdG 264 (269)
T 4dmm_A 185 VIGLTKTVAKELASRGITVNAVAPGFIATDMTSELAAEKLLEVIPLGRYGEAAEVAGVVRFLAADPAAAYITGQVINIDG 264 (269)
T ss_dssp HHHHHHHHHHHHGGGTCEEEEEEECCBTTSCSCHHHHHHHGGGCTTSSCBCHHHHHHHHHHHHHCGGGGGCCSCEEEEST
T ss_pred HHHHHHHHHHHHhhhCcEEEEEEECCCcCcccccccHHHHHhcCCCCCCCCHHHHHHHHHHHhCCcccCCCcCCEEEECC
Confidence 1 112222223457999999999986543221100 001111222346789999999999998743 3589999987
Q ss_pred CC
Q 021854 286 GE 287 (306)
Q Consensus 286 g~ 287 (306)
|-
T Consensus 265 G~ 266 (269)
T 4dmm_A 265 GL 266 (269)
T ss_dssp TS
T ss_pred Ce
Confidence 74
|
| >2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A | Back alignment and structure |
|---|
Probab=99.75 E-value=1.4e-17 Score=149.64 Aligned_cols=185 Identities=9% Similarity=0.033 Sum_probs=128.3
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhc-------CccEEEE
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR-------GVRSIIC 169 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~-------~~d~vi~ 169 (306)
..+|+|+||||+|+||++++++|+++|++|+++.|+.++ +.++.++.+|++|.++++++++ ++|++||
T Consensus 6 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-----~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lv~ 80 (264)
T 2dtx_A 6 LRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG-----EAKYDHIECDVTNPDQVKASIDHIFKEYGSISVLVN 80 (264)
T ss_dssp GTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC-----SCSSEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc-----CCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 357899999999999999999999999999999998755 3468899999999998888776 6899999
Q ss_pred cCCch------------------------------hhhcccccCCCEEEEecCcccccCCCCcccccchHHHHH--HHHH
Q 021854 170 PSEGF------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKL--AEQD 217 (306)
Q Consensus 170 ~~~g~------------------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~~--~~~a 217 (306)
+++.. ....+++.+.++||++||..++.+..+...|..+++... .+..
T Consensus 81 ~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~l 160 (264)
T 2dtx_A 81 NAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQASIITKNASAYVTSKHAVIGLTKSI 160 (264)
T ss_dssp CCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCchhccCCCCchhHHHHHHHHHHHHHHH
Confidence 84310 111233456789999999988876666666655433211 1111
Q ss_pred HHHHHhcCCCEEEEEcCcccCCCCC---------Cc----ce--eeecCCCCccccCHHHHHHHHHHHhhCCC--CCCcE
Q 021854 218 ESMLMASGIPYTIIRTGVLQNTPGG---------KQ----GF--QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLI 280 (306)
Q Consensus 218 E~~l~~sgi~~tiiRPg~l~~~~~~---------~~----~~--~~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~ 280 (306)
...+... +++++|+||++...... .. .. .+........+++++|+|++++.++.++. ..|+.
T Consensus 161 a~e~~~~-i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~s~~~~~~tG~~ 239 (264)
T 2dtx_A 161 ALDYAPL-LRCNAVCPATIDTPLVRKAAELEVGSDPMRIEKKISEWGHEHPMQRIGKPQEVASAVAFLASREASFITGTC 239 (264)
T ss_dssp HHHHTTT-SEEEEEEECSBCSHHHHHHHHHHHCSCHHHHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred HHHhcCC-cEEEEEEeCCCcCcchhhhhhcccccCchhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCCCCcE
Confidence 1112234 99999999986432100 00 00 00011122347899999999999997543 46889
Q ss_pred EEEecCC
Q 021854 281 FEVVNGE 287 (306)
Q Consensus 281 ~~v~~g~ 287 (306)
+.+.+|.
T Consensus 240 i~vdGG~ 246 (264)
T 2dtx_A 240 LYVDGGL 246 (264)
T ss_dssp EEESTTG
T ss_pred EEECCCc
Confidence 9998764
|
| >2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} | Back alignment and structure |
|---|
Probab=99.75 E-value=4.6e-18 Score=149.83 Aligned_cols=190 Identities=12% Similarity=0.120 Sum_probs=128.0
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEE-ecCcchhhhh------cCCCcee-eeccCCCHHHHHHHhc-------C
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKAL-VKDKRNAMES------FGTYVES-MAGDASNKKFLKTALR-------G 163 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l-~R~~~~~~~~------~~~~v~~-v~~D~~d~~~l~~~~~-------~ 163 (306)
+|+|+||||+|+||++++++|+++|++|+++ .|+.++..+. .+.++.. +.+|++|.++++++++ +
T Consensus 1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (245)
T 2ph3_A 1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEVLGG 80 (245)
T ss_dssp CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHHTC
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHhcCC
Confidence 4789999999999999999999999999998 7877653321 1345666 8999999988887754 7
Q ss_pred ccEEEEcCCch------------------------------hhhcccccCCCEEEEecCcccccCCCCcccccchHHHH-
Q 021854 164 VRSIICPSEGF------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK- 212 (306)
Q Consensus 164 ~d~vi~~~~g~------------------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~- 212 (306)
+|++||+++.. +...+++.+.++||++||..++.+..+...|..+++..
T Consensus 81 ~d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~ 160 (245)
T 2ph3_A 81 LDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKARFGRIVNITSVVGILGNPGQANYVASKAGLI 160 (245)
T ss_dssp CCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCSSBHHHHHHHHHHH
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCEEEEEeChhhccCCCCCcchHHHHHHHH
Confidence 89999984310 11223456789999999987766655555665443321
Q ss_pred -HHHHHHHHHHhcCCCEEEEEcCcccCCCCCC-cc-e--eeecCCCCccccCHHHHHHHHHHHhhCCC--CCCcEEEEec
Q 021854 213 -LAEQDESMLMASGIPYTIIRTGVLQNTPGGK-QG-F--QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVN 285 (306)
Q Consensus 213 -~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~-~~-~--~~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~~~v~~ 285 (306)
+.+.....+...++++++||||++....... .. . .+........+++++|+|++++.++.++. ..|+.|++.+
T Consensus 161 ~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~g 240 (245)
T 2ph3_A 161 GFTRAVAKEYAQRGITVNAVAPGFIETEMTERLPQEVKEAYLKQIPAGRFGRPEEVAEAVAFLVSEKAGYITGQTLCVDG 240 (245)
T ss_dssp HHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHHHHHHHHHTCTTCSCBCHHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred HHHHHHHHHHHHcCeEEEEEEEEeecCcchhhcCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcccccccCCEEEECC
Confidence 1122222233468999999999864221100 00 0 00011122356899999999999997643 3588999988
Q ss_pred CCc
Q 021854 286 GEE 288 (306)
Q Consensus 286 g~~ 288 (306)
|..
T Consensus 241 g~~ 243 (245)
T 2ph3_A 241 GLT 243 (245)
T ss_dssp TCS
T ss_pred CCC
Confidence 753
|
| >3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.75 E-value=7.8e-17 Score=144.29 Aligned_cols=192 Identities=10% Similarity=-0.006 Sum_probs=130.9
Q ss_pred ccCCCeEEEEcCCC-hHHHHHHHHHHHCCCeEEEEecCcchhhh-------hcCCCceeeeccCCCHHHHHHHhc-----
Q 021854 96 EEARDAVLVTDGDS-DIGQMVILSLIVKRTRIKALVKDKRNAME-------SFGTYVESMAGDASNKKFLKTALR----- 162 (306)
Q Consensus 96 ~~~~~~ilVtGatG-~iG~~l~~~L~~~g~~V~~l~R~~~~~~~-------~~~~~v~~v~~D~~d~~~l~~~~~----- 162 (306)
...+++++||||+| +||++++++|+++|++|+++.|+.++..+ ..+.++.++.+|++|.++++++++
T Consensus 19 ~l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 98 (266)
T 3o38_A 19 LLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVEK 98 (266)
T ss_dssp TTTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHHH
Confidence 45689999999997 79999999999999999999999876322 113578999999999998887775
Q ss_pred --CccEEEEcCCch--------------------------hhh----ccccc-CCCEEEEecCcccccCCCCcccccchH
Q 021854 163 --GVRSIICPSEGF--------------------------ISN----AGSLK-GVQHVILLSQLSVYRGSGGIQALMKGN 209 (306)
Q Consensus 163 --~~d~vi~~~~g~--------------------------~~~----~a~~~-gvkr~V~iSS~~~~~~~~~~~~~~~~~ 209 (306)
.+|++||+++-. +.+ ...+. +..+||++||..++.+..+...|..++
T Consensus 99 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK 178 (266)
T 3o38_A 99 AGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWRAQHSQSHYAAAK 178 (266)
T ss_dssp HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGTCCCTTCHHHHHHH
T ss_pred hCCCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHcCCCCCCchHHHHH
Confidence 569999984410 111 12222 567899999998887777777776544
Q ss_pred HHHH--HHHHHHHHHhcCCCEEEEEcCcccCCCCCC----c-ceeeecCCCCccccCHHHHHHHHHHHhhCC--CCCCcE
Q 021854 210 ARKL--AEQDESMLMASGIPYTIIRTGVLQNTPGGK----Q-GFQFEEGCAANGSLSKEDAAFICVEALESI--PQTGLI 280 (306)
Q Consensus 210 a~~~--~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~----~-~~~~~~g~~~~~~Is~~DVA~~iv~aL~~~--~~~g~~ 280 (306)
+... .+.....+...+++++.|+||++....... . ...+........+.+++|+|++++.++.+. ...|++
T Consensus 179 aa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~r~~~~~dva~~i~~l~s~~~~~~tG~~ 258 (266)
T 3o38_A 179 AGVMALTRCSAIEAVEFGVRINAVSPSIARHKFLEKTSSSELLDRLASDEAFGRAAEPWEVAATIAFLASDYSSYMTGEV 258 (266)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECCCCC-----------------CCTTSSCCCHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred HHHHHHHHHHHHHHHHcCcEEEEEeCCcccchhhhccCcHHHHHHHHhcCCcCCCCCHHHHHHHHHHHcCccccCccCCE
Confidence 3221 111222233479999999999865332110 0 001112222345678999999999998753 356899
Q ss_pred EEEecCC
Q 021854 281 FEVVNGE 287 (306)
Q Consensus 281 ~~v~~g~ 287 (306)
+++.+|-
T Consensus 259 i~vdgG~ 265 (266)
T 3o38_A 259 VSVSSQR 265 (266)
T ss_dssp EEESSCC
T ss_pred EEEcCCc
Confidence 9998763
|
| >2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.75 E-value=9e-18 Score=144.23 Aligned_cols=167 Identities=16% Similarity=0.188 Sum_probs=119.5
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh---cCCCceeeeccCCCHHHHHHHhc---CccEEEEcCCc
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALR---GVRSIICPSEG 173 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~---~~~~v~~v~~D~~d~~~l~~~~~---~~d~vi~~~~g 173 (306)
|+|+||||+|+||++++++|+++ +|+++.|+.++.... .+. +++.+|++|.++++++++ ++|+|||+++.
T Consensus 1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~~~~~~--~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag~ 76 (207)
T 2yut_A 1 MRVLITGATGGLGGAFARALKGH--DLLLSGRRAGALAELAREVGA--RALPADLADELEAKALLEEAGPLDLLVHAVGK 76 (207)
T ss_dssp CEEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHHHHHTC--EECCCCTTSHHHHHHHHHHHCSEEEEEECCCC
T ss_pred CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHHHhccC--cEEEeeCCCHHHHHHHHHhcCCCCEEEECCCc
Confidence 58999999999999999999988 999999988764332 222 788999999999999988 89999998431
Q ss_pred h--------------------------hhhcccccCCCEEEEecCcccccCCCCcccccchHHHH--HHHHHHHHHHhcC
Q 021854 174 F--------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK--LAEQDESMLMASG 225 (306)
Q Consensus 174 ~--------------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~--~~~~aE~~l~~sg 225 (306)
. +.+++.+.+.++||++||..++.+..+...|..+++.. +.+.....+...+
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~g 156 (207)
T 2yut_A 77 AGRASVREAGRDLVEEMLAAHLLTAAFVLKHARFQKGARAVFFGAYPRYVQVPGFAAYAAAKGALEAYLEAARKELLREG 156 (207)
T ss_dssp CCCBCSCC---CHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCCHHHHSSTTBHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred CCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHhcCCcEEEEEcChhhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhC
Confidence 0 23344556778999999999887766666665443321 1111122233479
Q ss_pred CCEEEEEcCcccCCCCCCcceeeecCCCCccccCHHHHHHHHHHHhhCCCC
Q 021854 226 IPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQ 276 (306)
Q Consensus 226 i~~tiiRPg~l~~~~~~~~~~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~~ 276 (306)
+++++||||++...... ..+.....+++++|+|++++.++.++..
T Consensus 157 i~v~~v~pg~v~t~~~~------~~~~~~~~~~~~~dva~~~~~~~~~~~~ 201 (207)
T 2yut_A 157 VHLVLVRLPAVATGLWA------PLGGPPKGALSPEEAARKVLEGLFREPV 201 (207)
T ss_dssp CEEEEECCCCBCSGGGG------GGTSCCTTCBCHHHHHHHHHHHHC--CC
T ss_pred CEEEEEecCcccCCCcc------ccCCCCCCCCCHHHHHHHHHHHHhCCCC
Confidence 99999999986533211 1222335789999999999999986643
|
| >2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.75 E-value=1.2e-17 Score=151.06 Aligned_cols=191 Identities=15% Similarity=0.136 Sum_probs=129.4
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh---cC--CCceeeeccCCCHHHHHHHhc-------Cc
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FG--TYVESMAGDASNKKFLKTALR-------GV 164 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~---~~--~~v~~v~~D~~d~~~l~~~~~-------~~ 164 (306)
..+++++||||+|+||++++++|+++|++|+++.|+.++..+. .. .++.++.+|++|.++++++++ ++
T Consensus 27 l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 106 (276)
T 2b4q_A 27 LAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYGDCQAIPADLSSEAGARRLAQALGELSARL 106 (276)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTSSCEEECCCCTTSHHHHHHHHHHHHHHCSCC
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence 4578999999999999999999999999999999998663321 11 267889999999988887775 68
Q ss_pred cEEEEcCCch------------------------------hhhcccccCC----CEEEEecCcccccCCCCcc-cccchH
Q 021854 165 RSIICPSEGF------------------------------ISNAGSLKGV----QHVILLSQLSVYRGSGGIQ-ALMKGN 209 (306)
Q Consensus 165 d~vi~~~~g~------------------------------~~~~a~~~gv----kr~V~iSS~~~~~~~~~~~-~~~~~~ 209 (306)
|++||+++.. ....+++.+. ++||++||..++.+..... .|..++
T Consensus 107 D~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~~~~~~~~~~~Y~asK 186 (276)
T 2b4q_A 107 DILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGISAMGEQAYAYGPSK 186 (276)
T ss_dssp SEEEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGGTCCCCCSCTTHHHHH
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHHcCCCCCCccccHHHH
Confidence 9999984310 0111223343 8999999998876655544 665443
Q ss_pred HHH--HHHHHHHHHHhcCCCEEEEEcCcccCCCCCC--cce--eeec--CCCCccccCHHHHHHHHHHHhhCCC--CCCc
Q 021854 210 ARK--LAEQDESMLMASGIPYTIIRTGVLQNTPGGK--QGF--QFEE--GCAANGSLSKEDAAFICVEALESIP--QTGL 279 (306)
Q Consensus 210 a~~--~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~--~~~--~~~~--g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~ 279 (306)
+.. +.+.....+...++++++|+||++....... ... .+.. ......+.+++|+|++++.++.++. ..|+
T Consensus 187 ~a~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~~~~~~tG~ 266 (276)
T 2b4q_A 187 AALHQLSRMLAKELVGEHINVNVIAPGRFPSRMTRHIANDPQALEADSASIPMGRWGRPEEMAALAISLAGTAGAYMTGN 266 (276)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECCCCSTTTHHHHHCHHHHHHHHHTSTTSSCCCHHHHHHHHHHHHSGGGTTCCSC
T ss_pred HHHHHHHHHHHHHhcccCeEEEEEEeccCcCcchhhcchhHHHHHHhhcCCCCCCcCCHHHHHHHHHHHhCccccCCCCC
Confidence 321 1111222233469999999999865432211 000 0001 1122346799999999999997643 4688
Q ss_pred EEEEecCC
Q 021854 280 IFEVVNGE 287 (306)
Q Consensus 280 ~~~v~~g~ 287 (306)
++.+.+|.
T Consensus 267 ~i~vdGG~ 274 (276)
T 2b4q_A 267 VIPIDGGF 274 (276)
T ss_dssp EEEESTTT
T ss_pred EEEeCCCc
Confidence 99998763
|
| >1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G | Back alignment and structure |
|---|
Probab=99.75 E-value=5.7e-18 Score=149.29 Aligned_cols=189 Identities=15% Similarity=0.159 Sum_probs=127.6
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEE-ecCcchhhh------hcCCCceeeeccCCCHHHHHHHhc-------Cc
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKAL-VKDKRNAME------SFGTYVESMAGDASNKKFLKTALR-------GV 164 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l-~R~~~~~~~------~~~~~v~~v~~D~~d~~~l~~~~~-------~~ 164 (306)
+|+|+||||+|+||++++++|+++|++|+++ .|+.++..+ ..+.++.++.+|++|.++++++++ ++
T Consensus 1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i 80 (244)
T 1edo_A 1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTI 80 (244)
T ss_dssp CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCC
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence 4789999999999999999999999999995 787655322 124568889999999999888876 68
Q ss_pred cEEEEcCCch--------------------------hhhc----ccccCCCEEEEecCcccccCCCCcccccchHHHH--
Q 021854 165 RSIICPSEGF--------------------------ISNA----GSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK-- 212 (306)
Q Consensus 165 d~vi~~~~g~--------------------------~~~~----a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~-- 212 (306)
|++||+++-. +.++ +.+.+.++||++||..++.+..+...|..+++..
T Consensus 81 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~ 160 (244)
T 1edo_A 81 DVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIG 160 (244)
T ss_dssp SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHHHHHH
T ss_pred CEEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCEEEEECChhhcCCCCCCccchhhHHHHHH
Confidence 9999984310 1111 2235778999999998776655556665443321
Q ss_pred HHHHHHHHHHhcCCCEEEEEcCcccCCCCC--Ccce--eeecCCCCccccCHHHHHHHHHHHhhCCC---CCCcEEEEec
Q 021854 213 LAEQDESMLMASGIPYTIIRTGVLQNTPGG--KQGF--QFEEGCAANGSLSKEDAAFICVEALESIP---QTGLIFEVVN 285 (306)
Q Consensus 213 ~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~--~~~~--~~~~g~~~~~~Is~~DVA~~iv~aL~~~~---~~g~~~~v~~ 285 (306)
+.+.....+...++++++||||++...... .... .+........+++++|+|++++.++.++. ..|+.|++.+
T Consensus 161 ~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~~G~~~~v~g 240 (244)
T 1edo_A 161 FSKTAAREGASRNINVNVVCPGFIASDMTAKLGEDMEKKILGTIPLGRTGQPENVAGLVEFLALSPAASYITGQAFTIDG 240 (244)
T ss_dssp HHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCHHHHHHHHTSCTTCSCBCHHHHHHHHHHHHHCSGGGGCCSCEEEEST
T ss_pred HHHHHHHHhhhcCCEEEEEeeCccccchhhhcChHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCccCCcCCCEEEeCC
Confidence 112222223457899999999986432110 0000 00011122346899999999999985443 3588999987
Q ss_pred CC
Q 021854 286 GE 287 (306)
Q Consensus 286 g~ 287 (306)
|.
T Consensus 241 G~ 242 (244)
T 1edo_A 241 GI 242 (244)
T ss_dssp TT
T ss_pred Cc
Confidence 64
|
| >3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.75 E-value=4.9e-17 Score=148.83 Aligned_cols=179 Identities=17% Similarity=0.130 Sum_probs=122.5
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh------cCCCceeeeccCCCHHHHHHHhc-------C
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------G 163 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~~~-------~ 163 (306)
..+++|+||||+|+||++++++|+++|++|+++.|+.++..+. .+.++.++.+|++|.++++++++ +
T Consensus 29 l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 108 (301)
T 3tjr_A 29 FDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLLGG 108 (301)
T ss_dssp STTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhCCC
Confidence 4679999999999999999999999999999999998764322 24578899999999998888775 7
Q ss_pred ccEEEEcCCch--------------------------hhhc----ccccC-CCEEEEecCcccccCCCCcccccchHHHH
Q 021854 164 VRSIICPSEGF--------------------------ISNA----GSLKG-VQHVILLSQLSVYRGSGGIQALMKGNARK 212 (306)
Q Consensus 164 ~d~vi~~~~g~--------------------------~~~~----a~~~g-vkr~V~iSS~~~~~~~~~~~~~~~~~a~~ 212 (306)
+|++||+++.. +.++ +.+.+ ..+||++||..++.+..+...|..+++..
T Consensus 109 id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~ 188 (301)
T 3tjr_A 109 VDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVPNAGLGTYGVAKYGV 188 (301)
T ss_dssp CSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCTTBHHHHHHHHHH
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCCCchHHHHHHHHH
Confidence 89999984410 1111 22334 57999999999988777777776554322
Q ss_pred --HHHHHHHHHHhcCCCEEEEEcCcccCCCCC--------Ccc------eeeecCCCCccccCHHHHHHHHHHHhhCCC
Q 021854 213 --LAEQDESMLMASGIPYTIIRTGVLQNTPGG--------KQG------FQFEEGCAANGSLSKEDAAFICVEALESIP 275 (306)
Q Consensus 213 --~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~--------~~~------~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~ 275 (306)
+.+.....+...|++++.|+||++...... ... ..+........+++++|||+.++.+++.+.
T Consensus 189 ~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~i~~~l~~~~ 267 (301)
T 3tjr_A 189 VGLAETLAREVKPNGIGVSVLCPMVVETKLVSNSERIRGADYGMSATPEGAFGPLPTQDESVSADDVARLTADAILANR 267 (301)
T ss_dssp HHHHHHHHHHHGGGTEEEEEECCSCCCSSHHHHHHHHC----------------------CCCHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHhcccCcEEEEEECCccccccccccccccchhhccccChhhhccccccccCCCCHHHHHHHHHHHHhcCC
Confidence 112222224457899999999986432110 000 001111122457899999999999998653
|
| >1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.75 E-value=2.6e-17 Score=144.92 Aligned_cols=180 Identities=18% Similarity=0.150 Sum_probs=118.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCC--CeEEEEecCcchhhhhc---CCCceeeeccCCCHHHHHHHhc---------C
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRNAMESF---GTYVESMAGDASNKKFLKTALR---------G 163 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g--~~V~~l~R~~~~~~~~~---~~~v~~v~~D~~d~~~l~~~~~---------~ 163 (306)
++++|+||||+|+||++++++|+++| ++|+++.|+.++..... +.++.++.+|++|.++++++++ +
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~~ 81 (250)
T 1yo6_A 2 SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDG 81 (250)
T ss_dssp CCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGGC
T ss_pred CCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHhccCCceEEEEeecCCHHHHHHHHHHHHHhcCCCC
Confidence 36899999999999999999999999 99999999987643321 3478899999999999888876 8
Q ss_pred ccEEEEcCC--c-h------------------------hhhc----cccc------C-----CCEEEEecCcccccCC--
Q 021854 164 VRSIICPSE--G-F------------------------ISNA----GSLK------G-----VQHVILLSQLSVYRGS-- 199 (306)
Q Consensus 164 ~d~vi~~~~--g-~------------------------~~~~----a~~~------g-----vkr~V~iSS~~~~~~~-- 199 (306)
+|++||+++ . . +.++ +.+. + .++||++||..++.+.
T Consensus 82 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~ 161 (250)
T 1yo6_A 82 LSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNT 161 (250)
T ss_dssp CCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTTCC
T ss_pred CcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCccccCCcc
Confidence 999999833 1 0 0111 1222 4 7899999998876543
Q ss_pred -----CCcccccchHHHHH--HHHHHHHHHhcCCCEEEEEcCcccCCCCCCcceeeecCCCCccccCHHHHHHHHHHHhh
Q 021854 200 -----GGIQALMKGNARKL--AEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALE 272 (306)
Q Consensus 200 -----~~~~~~~~~~a~~~--~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~~~~~~~~g~~~~~~Is~~DVA~~iv~aL~ 272 (306)
.+...|..+++... .+.....+...++++++|+||++....... ..+++++|+|+.++.++.
T Consensus 162 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-----------~~~~~~~~~a~~~~~~~~ 230 (250)
T 1yo6_A 162 SGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGK-----------NAALTVEQSTAELISSFN 230 (250)
T ss_dssp STTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC------------------------HHHHHHHHHHHT
T ss_pred cccccCCccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcCCceecCCCCC-----------CCCCCHHHHHHHHHHHHh
Confidence 23344543322111 111111122358999999999875332211 246899999999999998
Q ss_pred CCC--CCCcEEEEecCCc
Q 021854 273 SIP--QTGLIFEVVNGEE 288 (306)
Q Consensus 273 ~~~--~~g~~~~v~~g~~ 288 (306)
.+. ..|+.+.+.++..
T Consensus 231 ~~~~~~~G~~~~~~g~~~ 248 (250)
T 1yo6_A 231 KLDNSHNGRFFMRNLKPY 248 (250)
T ss_dssp TCCGGGTTCEEETTEEEC
T ss_pred cccccCCCeEEEECCcCC
Confidence 765 3566666665543
|
| >3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} | Back alignment and structure |
|---|
Probab=99.75 E-value=1.3e-17 Score=149.13 Aligned_cols=193 Identities=11% Similarity=0.087 Sum_probs=135.2
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhh------hcCCCceeeeccCCCHHHHHHHhc-------
Q 021854 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTALR------- 162 (306)
Q Consensus 96 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~------~~~~~v~~v~~D~~d~~~l~~~~~------- 162 (306)
...+++++||||+|+||++++++|+++|++|+++.|+.++..+ ..+.++.++.+|++|.++++++++
T Consensus 9 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 88 (256)
T 3gaf_A 9 HLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQFG 88 (256)
T ss_dssp CCTTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 3467999999999999999999999999999999999876332 124578899999999988887775
Q ss_pred CccEEEEcCCch-------------------------hh----hcccccCCCEEEEecCcccccCCCCcccccchHHHH-
Q 021854 163 GVRSIICPSEGF-------------------------IS----NAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK- 212 (306)
Q Consensus 163 ~~d~vi~~~~g~-------------------------~~----~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~- 212 (306)
.+|++||+++.. +. ..+++.+..+||++||..++.+..+...|..+++..
T Consensus 89 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~ 168 (256)
T 3gaf_A 89 KITVLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAGENTNVRMASYGSSKAAVN 168 (256)
T ss_dssp CCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTCCCTTCHHHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHHcCCCCCchHHHHHHHHHH
Confidence 789999984310 11 113345678999999999888777777776544322
Q ss_pred -HHHHHHHHHHhcCCCEEEEEcCcccCCCC----CCc-ceeeecCCCCccccCHHHHHHHHHHHhhCCC--CCCcEEEEe
Q 021854 213 -LAEQDESMLMASGIPYTIIRTGVLQNTPG----GKQ-GFQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVV 284 (306)
Q Consensus 213 -~~~~aE~~l~~sgi~~tiiRPg~l~~~~~----~~~-~~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~~~v~ 284 (306)
+.+.....+...+++++.|+||++..... ... ...+........+.+++|+|++++.++.+.. -.|+++++.
T Consensus 169 ~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~~~~L~s~~~~~itG~~i~vd 248 (256)
T 3gaf_A 169 HLTRNIAFDVGPMGIRVNAIAPGAIKTDALATVLTPEIERAMLKHTPLGRLGEAQDIANAALFLCSPAAAWISGQVLTVS 248 (256)
T ss_dssp HHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHCCHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred HHHHHHHHHHhhhCcEEEEEEEccccCchhhhccCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCCcccCccCCEEEEC
Confidence 11222222334689999999998653211 000 0001122223456789999999999987543 468999999
Q ss_pred cCCc
Q 021854 285 NGEE 288 (306)
Q Consensus 285 ~g~~ 288 (306)
+|..
T Consensus 249 gG~~ 252 (256)
T 3gaf_A 249 GGGV 252 (256)
T ss_dssp TTSC
T ss_pred CCcc
Confidence 8764
|
| >3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} | Back alignment and structure |
|---|
Probab=99.75 E-value=1.3e-17 Score=150.96 Aligned_cols=191 Identities=14% Similarity=0.140 Sum_probs=131.1
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh------cCCCceeeeccCCCHHHHHHHhc-------C
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------G 163 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~~~-------~ 163 (306)
..+|++|||||+|+||++++++|+++|++|+++.|+.++..+. .+.++.++.+|++|.++++++++ .
T Consensus 22 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 101 (279)
T 3sju_A 22 SRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERFGP 101 (279)
T ss_dssp ---CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHCS
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 3578999999999999999999999999999999998763321 24578899999999988887765 6
Q ss_pred ccEEEEcCCch--------------------------hhhc------ccccCCCEEEEecCcccccCCCCcccccchHHH
Q 021854 164 VRSIICPSEGF--------------------------ISNA------GSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR 211 (306)
Q Consensus 164 ~d~vi~~~~g~--------------------------~~~~------a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~ 211 (306)
+|++||+++.. +.++ +.+.+..+||++||..++.+..+...|..+++.
T Consensus 102 id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~asKaa 181 (279)
T 3sju_A 102 IGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGGKQGVMYAAPYTASKHG 181 (279)
T ss_dssp CCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred CcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcCCcEEEEECChhhccCCCCChhHHHHHHH
Confidence 79999984310 1111 233567899999999988777776677654432
Q ss_pred H--HHHHHHHHHHhcCCCEEEEEcCcccCCCC--------CCcc-------eeeecCCCCccccCHHHHHHHHHHHhhCC
Q 021854 212 K--LAEQDESMLMASGIPYTIIRTGVLQNTPG--------GKQG-------FQFEEGCAANGSLSKEDAAFICVEALESI 274 (306)
Q Consensus 212 ~--~~~~aE~~l~~sgi~~tiiRPg~l~~~~~--------~~~~-------~~~~~g~~~~~~Is~~DVA~~iv~aL~~~ 274 (306)
. +.+.....+...+++++.|+||++..... .... ..+........+.+++|||++++.++.+.
T Consensus 182 ~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~ 261 (279)
T 3sju_A 182 VVGFTKSVGFELAKTGITVNAVCPGYVETPMAERVREGYARHWGVTEQEVHERFNAKIPLGRYSTPEEVAGLVGYLVTDA 261 (279)
T ss_dssp HHHHHHHHHHHTGGGTEEEEEEEESSBCSHHHHHHHHSCCSSSCCCHHHHHHHHHTTCTTSSCBCHHHHHHHHHHHTSSG
T ss_pred HHHHHHHHHHHHHhhCcEEEEEeeCcccchHHHHHHhhhhhcccCChHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCcc
Confidence 1 11111122334789999999998642210 0000 00111222244678999999999998765
Q ss_pred C--CCCcEEEEecCC
Q 021854 275 P--QTGLIFEVVNGE 287 (306)
Q Consensus 275 ~--~~g~~~~v~~g~ 287 (306)
. ..|++++|.+|-
T Consensus 262 a~~itG~~i~vdGG~ 276 (279)
T 3sju_A 262 AASITAQALNVCGGL 276 (279)
T ss_dssp GGGCCSCEEEESTTC
T ss_pred ccCcCCcEEEECCCc
Confidence 3 468999998875
|
| >3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.75 E-value=5.8e-17 Score=146.50 Aligned_cols=192 Identities=14% Similarity=0.067 Sum_probs=131.7
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecC-------------cchhhh------hcCCCceeeeccCCCHHH
Q 021854 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKD-------------KRNAME------SFGTYVESMAGDASNKKF 156 (306)
Q Consensus 96 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~-------------~~~~~~------~~~~~v~~v~~D~~d~~~ 156 (306)
...+|+++||||+|+||++++++|+++|++|+++.|+ .++..+ ..+.++.++.+|++|.++
T Consensus 12 ~l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~ 91 (280)
T 3pgx_A 12 SLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDAA 91 (280)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHH
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHH
Confidence 3457999999999999999999999999999999983 332211 124578889999999998
Q ss_pred HHHHhc-------CccEEEEcCCch--------------------------hhh----cccccC-CCEEEEecCcccccC
Q 021854 157 LKTALR-------GVRSIICPSEGF--------------------------ISN----AGSLKG-VQHVILLSQLSVYRG 198 (306)
Q Consensus 157 l~~~~~-------~~d~vi~~~~g~--------------------------~~~----~a~~~g-vkr~V~iSS~~~~~~ 198 (306)
++++++ .+|++||+++.. +.+ .+.+.+ ..+||++||..++.+
T Consensus 92 v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~ 171 (280)
T 3pgx_A 92 LRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLKA 171 (280)
T ss_dssp HHHHHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEcchhhccC
Confidence 888765 689999984410 111 122333 578999999998887
Q ss_pred CCCcccccchHHHH--HHHHHHHHHHhcCCCEEEEEcCcccCCCCCC--------------cceeeecCCCCccccCHHH
Q 021854 199 SGGIQALMKGNARK--LAEQDESMLMASGIPYTIIRTGVLQNTPGGK--------------QGFQFEEGCAANGSLSKED 262 (306)
Q Consensus 199 ~~~~~~~~~~~a~~--~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~--------------~~~~~~~g~~~~~~Is~~D 262 (306)
..+...|..+++.. +.+.....+...+|+++.|+||++....... ..+.. .......+.+++|
T Consensus 172 ~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~r~~~p~d 250 (280)
T 3pgx_A 172 TPGNGHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMIEPEAMMEIFARHPSFVHSFPP-MPVQPNGFMTADE 250 (280)
T ss_dssp CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCHHHHHHHHHHCGGGGGGSCC-BTTBCSSCBCHHH
T ss_pred CCCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccCcccchhhhhhhhhcCchhhhhhhh-cccCCCCCCCHHH
Confidence 77777776544322 1122222234579999999999865332211 00001 1111224789999
Q ss_pred HHHHHHHHhhCCC--CCCcEEEEecCCc
Q 021854 263 AAFICVEALESIP--QTGLIFEVVNGEE 288 (306)
Q Consensus 263 VA~~iv~aL~~~~--~~g~~~~v~~g~~ 288 (306)
||+++++++.+.. -.|+++++.+|..
T Consensus 251 vA~~v~~L~s~~~~~itG~~i~vdGG~~ 278 (280)
T 3pgx_A 251 VADVVAWLAGDGSGTLTGTQIPVDKGAL 278 (280)
T ss_dssp HHHHHHHHHSGGGTTCSSCEEEESTTGG
T ss_pred HHHHHHHHhCccccCCCCCEEEECCCcc
Confidence 9999999997543 4689999988753
|
| >3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.75 E-value=1.6e-17 Score=150.09 Aligned_cols=192 Identities=14% Similarity=0.165 Sum_probs=135.1
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhh---hcCCCceeeeccCCCHHHHHHHhc------CccE
Q 021854 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALR------GVRS 166 (306)
Q Consensus 96 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~---~~~~~v~~v~~D~~d~~~l~~~~~------~~d~ 166 (306)
...+++++||||+|+||++++++|+++|++|+++.|+.++..+ ..+.++.++.+|++|.++++++++ ++|+
T Consensus 27 ~l~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~id~ 106 (281)
T 3ppi_A 27 QFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADELGNRAEFVSTNVTSEDSVLAAIEAANQLGRLRY 106 (281)
T ss_dssp GGTTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHTTSSEEEE
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhCCCCe
Confidence 3457899999999999999999999999999999999876432 345678999999999999888775 5699
Q ss_pred EEEcCCch--------------------------------hhhc----ccc------cCCCEEEEecCcccccCCCCccc
Q 021854 167 IICPSEGF--------------------------------ISNA----GSL------KGVQHVILLSQLSVYRGSGGIQA 204 (306)
Q Consensus 167 vi~~~~g~--------------------------------~~~~----a~~------~gvkr~V~iSS~~~~~~~~~~~~ 204 (306)
+||++++. +..+ ..+ .+..+||++||..++.+..+...
T Consensus 107 lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~ 186 (281)
T 3ppi_A 107 AVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYEGQIGQTA 186 (281)
T ss_dssp EEECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCGGGTSCCTTCHH
T ss_pred EEEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEecccccCCCCCCcc
Confidence 99873211 0000 111 34569999999999887777777
Q ss_pred ccchHHHH--HHHHHHHHHHhcCCCEEEEEcCcccCCCCC--Ccc--eeeecCCCC-ccccCHHHHHHHHHHHhhCCCCC
Q 021854 205 LMKGNARK--LAEQDESMLMASGIPYTIIRTGVLQNTPGG--KQG--FQFEEGCAA-NGSLSKEDAAFICVEALESIPQT 277 (306)
Q Consensus 205 ~~~~~a~~--~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~--~~~--~~~~~g~~~-~~~Is~~DVA~~iv~aL~~~~~~ 277 (306)
|..+++.. +.+.....+...+++++.|+||++...... ... ..+...... ..+.+++|+|++++.++.++...
T Consensus 187 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~~l~s~~~~t 266 (281)
T 3ppi_A 187 YAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTPIMESVGEEALAKFAANIPFPKRLGTPDEFADAAAFLLTNGYIN 266 (281)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTTCHHHHHHHHHTCCSSSSCBCHHHHHHHHHHHHHCSSCC
T ss_pred cHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCCchhhhcccHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHcCCCcC
Confidence 76554322 112222224456899999999986432110 000 001111112 45789999999999999987678
Q ss_pred CcEEEEecCC
Q 021854 278 GLIFEVVNGE 287 (306)
Q Consensus 278 g~~~~v~~g~ 287 (306)
|+++++.+|.
T Consensus 267 G~~i~vdGG~ 276 (281)
T 3ppi_A 267 GEVMRLDGAQ 276 (281)
T ss_dssp SCEEEESTTC
T ss_pred CcEEEECCCc
Confidence 9999998875
|
| >2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=99.75 E-value=1.1e-17 Score=149.51 Aligned_cols=186 Identities=16% Similarity=0.140 Sum_probs=125.4
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcC-------ccEEEE
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRG-------VRSIIC 169 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~-------~d~vi~ 169 (306)
.++++|+||||+|+||++++++|+++|++|+++.|+.++.. .+.++.+|++|.++++++++. +|++|+
T Consensus 19 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~-----~~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~lv~ 93 (253)
T 2nm0_A 19 HMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPE-----GFLAVKCDITDTEQVEQAYKEIEETHGPVEVLIA 93 (253)
T ss_dssp -CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT-----TSEEEECCTTSHHHHHHHHHHHHHHTCSCSEEEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhhc-----cceEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 35789999999999999999999999999999999876543 378899999999988877754 699998
Q ss_pred cCCch--------------------------hh----hcccccCCCEEEEecCcccccCCCCcccccchHHHH--HHHHH
Q 021854 170 PSEGF--------------------------IS----NAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK--LAEQD 217 (306)
Q Consensus 170 ~~~g~--------------------------~~----~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~--~~~~a 217 (306)
+++.. +. ..+.+.+.++||++||..++.+......|..+++.. +.+..
T Consensus 94 nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~l 173 (253)
T 2nm0_A 94 NAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAKKGRVVLISSVVGLLGSAGQANYAASKAGLVGFARSL 173 (253)
T ss_dssp ECSCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCCCCcHHHHHHHHHHHHHHHHH
Confidence 74310 11 122335778999999988776544444554433211 11112
Q ss_pred HHHHHhcCCCEEEEEcCcccCCCCCCc-c-e--eeecCCCCccccCHHHHHHHHHHHhhCCC--CCCcEEEEecCC
Q 021854 218 ESMLMASGIPYTIIRTGVLQNTPGGKQ-G-F--QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVNGE 287 (306)
Q Consensus 218 E~~l~~sgi~~tiiRPg~l~~~~~~~~-~-~--~~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~~~v~~g~ 287 (306)
...+...++++++|+||++........ . . .+........+++++|+|++++.++.++. ..|+.+.+.+|.
T Consensus 174 a~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~i~~l~s~~~~~~tG~~i~vdGG~ 249 (253)
T 2nm0_A 174 ARELGSRNITFNVVAPGFVDTDMTKVLTDEQRANIVSQVPLGRYARPEEIAATVRFLASDDASYITGAVIPVDGGL 249 (253)
T ss_dssp HHHHCSSSEEEEEEEECSBCC---------CHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred HHHhhhcCeEEEEEEeCcCcCcchhhcCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCcCcEEEECCcc
Confidence 222334689999999998643321110 0 0 00011122346899999999999997643 468899998764
|
| >3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} | Back alignment and structure |
|---|
Probab=99.74 E-value=6.5e-17 Score=144.28 Aligned_cols=192 Identities=13% Similarity=0.074 Sum_probs=128.8
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhh---hcCCCceeeeccCCCHHHHHHHhc-------CccE
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALR-------GVRS 166 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~---~~~~~v~~v~~D~~d~~~l~~~~~-------~~d~ 166 (306)
..+++++||||+|+||++++++|+++|++|+++.|+.++..+ ..+..+.++.+|++|.++++++++ .+|+
T Consensus 7 l~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~ 86 (261)
T 3n74_A 7 LEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIGDAALAVAADISKEADVDAAVEAALSKFGKVDI 86 (261)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHhcCCCCE
Confidence 457999999999999999999999999999999999876433 345678999999999988887776 6799
Q ss_pred EEEcCCch---------------------------hhh----ccccc----CCCEEEEecCcccccCCCCcccccchHHH
Q 021854 167 IICPSEGF---------------------------ISN----AGSLK----GVQHVILLSQLSVYRGSGGIQALMKGNAR 211 (306)
Q Consensus 167 vi~~~~g~---------------------------~~~----~a~~~----gvkr~V~iSS~~~~~~~~~~~~~~~~~a~ 211 (306)
+||+++-. +.+ .+.+. +..+||++||..++.+......|..+++.
T Consensus 87 li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asKaa 166 (261)
T 3n74_A 87 LVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGRPRPNLAWYNATKGW 166 (261)
T ss_dssp EEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTTSCCTTCHHHHHHHHH
T ss_pred EEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhcCCCCCccHHHHHHHH
Confidence 99984310 001 11122 14579999999888776666667554432
Q ss_pred H--HHHHHHHHHHhcCCCEEEEEcCcccCCCCC------Cc--ceeeecCCCCccccCHHHHHHHHHHHhhCCC--CCCc
Q 021854 212 K--LAEQDESMLMASGIPYTIIRTGVLQNTPGG------KQ--GFQFEEGCAANGSLSKEDAAFICVEALESIP--QTGL 279 (306)
Q Consensus 212 ~--~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~------~~--~~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~ 279 (306)
. +.+.....+...+++++.|+||++...... .. ...+........+++++|+|++++.++.... ..|+
T Consensus 167 ~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~itG~ 246 (261)
T 3n74_A 167 VVSVTKALAIELAPAKIRVVALNPVAGETPLLTTFMGEDSEEIRKKFRDSIPMGRLLKPDDLAEAAAFLCSPQASMITGV 246 (261)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEEC-------------------------CTTSSCCCHHHHHHHHHHHTSGGGTTCCSC
T ss_pred HHHHHHHHHHHhhhcCcEEEEEecCcccChhhhhhcccCcHHHHHHHhhcCCcCCCcCHHHHHHHHHHHcCCcccCcCCc
Confidence 2 112222223447899999999985422110 00 0011122223457899999999999996433 4689
Q ss_pred EEEEecCCc
Q 021854 280 IFEVVNGEE 288 (306)
Q Consensus 280 ~~~v~~g~~ 288 (306)
++++.+|..
T Consensus 247 ~i~vdgG~~ 255 (261)
T 3n74_A 247 ALDVDGGRS 255 (261)
T ss_dssp EEEESTTTT
T ss_pred EEEecCCcc
Confidence 999998753
|
| >3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
Probab=99.74 E-value=4.5e-17 Score=145.31 Aligned_cols=178 Identities=12% Similarity=0.054 Sum_probs=118.5
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh------cCCCceeeeccCCCHHHHHHHhc------Cc
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR------GV 164 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~~~------~~ 164 (306)
..+++++||||+|+||++++++|+++|++|+++.|+.++..+. .+.++.++.+|++|.++++++++ .+
T Consensus 5 ~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~g~i 84 (252)
T 3h7a_A 5 PRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAHAPL 84 (252)
T ss_dssp CCSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHSCE
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhhCCc
Confidence 3579999999999999999999999999999999998764322 24578899999999999988876 67
Q ss_pred cEEEEcCCch------------------------------hhhcccccCCCEEEEecCcccccCCCCcccccchHHHH--
Q 021854 165 RSIICPSEGF------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK-- 212 (306)
Q Consensus 165 d~vi~~~~g~------------------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~-- 212 (306)
|++||+++.. +...+++.+..+||++||..+..+..+...|..+++..
T Consensus 85 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~ 164 (252)
T 3h7a_A 85 EVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHGQGKIFFTGATASLRGGSGFAAFASAKFGLRA 164 (252)
T ss_dssp EEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTCCCTTCHHHHHHHHHHHH
T ss_pred eEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHHcCCCCCCccHHHHHHHHHH
Confidence 9999984410 11123445667999999999887777777776554322
Q ss_pred HHHHHHHHHHhcCCCE-EEEEcCcccCCCCCCc-ce---eeecCCCCccccCHHHHHHHHHHHhhCCC
Q 021854 213 LAEQDESMLMASGIPY-TIIRTGVLQNTPGGKQ-GF---QFEEGCAANGSLSKEDAAFICVEALESIP 275 (306)
Q Consensus 213 ~~~~aE~~l~~sgi~~-tiiRPg~l~~~~~~~~-~~---~~~~g~~~~~~Is~~DVA~~iv~aL~~~~ 275 (306)
+.+.....+...++++ +.|+||++........ .. .+... ....+.+++|+|++++.++.++.
T Consensus 165 l~~~la~e~~~~gi~v~n~v~PG~v~T~~~~~~~~~~~~~~~~~-~~~~~~~pedvA~~~~~l~s~~~ 231 (252)
T 3h7a_A 165 VAQSMARELMPKNIHVAHLIIDSGVDTAWVRERREQMFGKDALA-NPDLLMPPAAVAGAYWQLYQQPK 231 (252)
T ss_dssp HHHHHHHHHGGGTEEEEEEEEC----------------------------CCHHHHHHHHHHHHHCCG
T ss_pred HHHHHHHHhhhcCCEEEEEecCCccCChhhhccchhhhhhhhhc-CCccCCCHHHHHHHHHHHHhCch
Confidence 1122222344578999 8999998643221110 00 01111 12238899999999999998665
|
| >3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.74 E-value=3.4e-17 Score=148.48 Aligned_cols=191 Identities=16% Similarity=0.120 Sum_probs=132.6
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh------cCCCceeeeccCCCHHHHHHHhc-------C
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------G 163 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~~~-------~ 163 (306)
..+|+++||||+|+||++++++|+++|++|+++.|+.++..+. .+.++.++.+|++|.++++++++ +
T Consensus 6 l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 85 (280)
T 3tox_A 6 LEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRRFGG 85 (280)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 3578999999999999999999999999999999998763321 23578899999999988887775 6
Q ss_pred ccEEEEcCCch---------------------------h----hhcccccCCCEEEEecCcccc-cCCCCcccccchHHH
Q 021854 164 VRSIICPSEGF---------------------------I----SNAGSLKGVQHVILLSQLSVY-RGSGGIQALMKGNAR 211 (306)
Q Consensus 164 ~d~vi~~~~g~---------------------------~----~~~a~~~gvkr~V~iSS~~~~-~~~~~~~~~~~~~a~ 211 (306)
+|++||+++.. + ...+.+.+..+||++||..++ .+..+...|..+++.
T Consensus 86 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~asKaa 165 (280)
T 3tox_A 86 LDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGHTAGFAGVAPYAASKAG 165 (280)
T ss_dssp CCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCSBTTTBCCTTCHHHHHHHHH
T ss_pred CCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhCcCCCCCchhHHHHHHH
Confidence 89999984310 0 111234566799999998887 455555666554432
Q ss_pred H--HHHHHHHHHHhcCCCEEEEEcCcccCCCCCC-----cce---eeecCCCCccccCHHHHHHHHHHHhhCCC--CCCc
Q 021854 212 K--LAEQDESMLMASGIPYTIIRTGVLQNTPGGK-----QGF---QFEEGCAANGSLSKEDAAFICVEALESIP--QTGL 279 (306)
Q Consensus 212 ~--~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~-----~~~---~~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~ 279 (306)
. +.+.....+...+|+++.|+||++....... ... .+........+.+++|||++++.++.+.. -.|+
T Consensus 166 ~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~a~~itG~ 245 (280)
T 3tox_A 166 LIGLVQALAVELGARGIRVNALLPGGTDTPANFANLPGAAPETRGFVEGLHALKRIARPEEIAEAALYLASDGASFVTGA 245 (280)
T ss_dssp HHHHHHHHHHHHHTTTEEEEEEEECSBSSTTSGGGSTTCCTHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSC
T ss_pred HHHHHHHHHHHhhhcCeEEEEEEECCCCCchhhhhccccCHHHHHHHhccCccCCCcCHHHHHHHHHHHhCccccCCcCc
Confidence 1 1122222344579999999999865332111 000 01112222456789999999999997643 4689
Q ss_pred EEEEecCC
Q 021854 280 IFEVVNGE 287 (306)
Q Consensus 280 ~~~v~~g~ 287 (306)
+++|.+|.
T Consensus 246 ~i~vdGG~ 253 (280)
T 3tox_A 246 ALLADGGA 253 (280)
T ss_dssp EEEESTTG
T ss_pred EEEECCCc
Confidence 99999875
|
| >3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} | Back alignment and structure |
|---|
Probab=99.74 E-value=4.5e-17 Score=148.02 Aligned_cols=191 Identities=15% Similarity=0.132 Sum_probs=125.6
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh---cCCCceeeeccCCCHHHHHHHhc---CccEEEE
Q 021854 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALR---GVRSIIC 169 (306)
Q Consensus 96 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~---~~~~v~~v~~D~~d~~~l~~~~~---~~d~vi~ 169 (306)
...+|+|+||||+|+||++++++|+++|++|++++|+.++..+. .+.++.++.+|++|.++++++++ .+|++||
T Consensus 13 ~l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~iD~lv~ 92 (291)
T 3rd5_A 13 SFAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMAGQVEVRELDLQDLSSVRRFADGVSGADVLIN 92 (291)
T ss_dssp CCTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTSSSEEEEEECCTTCHHHHHHHHHTCCCEEEEEE
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCeeEEEcCCCCHHHHHHHHHhcCCCCEEEE
Confidence 44679999999999999999999999999999999998774433 34578999999999999999887 5699999
Q ss_pred cCCch------------------------hhhcccccCCCEEEEecCcccccCC-------------CCcccccchHHHH
Q 021854 170 PSEGF------------------------ISNAGSLKGVQHVILLSQLSVYRGS-------------GGIQALMKGNARK 212 (306)
Q Consensus 170 ~~~g~------------------------~~~~a~~~gvkr~V~iSS~~~~~~~-------------~~~~~~~~~~a~~ 212 (306)
+++-. +.+++.....++||++||..++.+. .+...|..+++..
T Consensus 93 nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~riv~isS~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~ 172 (291)
T 3rd5_A 93 NAGIMAVPYALTVDGFESQIGTNHLGHFALTNLLLPRLTDRVVTVSSMAHWPGRINLEDLNWRSRRYSPWLAYSQSKLAN 172 (291)
T ss_dssp CCCCCSCCCCBCTTSCBHHHHHHTHHHHHHHHHHGGGEEEEEEEECCGGGTTCCCCSSCTTCSSSCCCHHHHHHHHHHHH
T ss_pred CCcCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeEeechhhccCCCCcccccccccCCCCcchHHHHHHHH
Confidence 84410 2223333445699999998876432 1222343332211
Q ss_pred --HHHHHHHHHHhcC--CCEEEEEcCcccCCCCCCcceee----ecCCCCccccCHHHHHHHHHHHhhCCCCCCcEEEEe
Q 021854 213 --LAEQDESMLMASG--IPYTIIRTGVLQNTPGGKQGFQF----EEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVV 284 (306)
Q Consensus 213 --~~~~aE~~l~~sg--i~~tiiRPg~l~~~~~~~~~~~~----~~g~~~~~~Is~~DVA~~iv~aL~~~~~~g~~~~v~ 284 (306)
+.+.....+...+ ++++.|+||++...........+ ..........+++|+|+.++.++.++...|+.+.+.
T Consensus 173 ~~~~~~la~e~~~~g~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~l~~~~~~~G~~~~vd 252 (291)
T 3rd5_A 173 LLFTSELQRRLTAAGSPLRALAAHPGYSHTNLQGASGRKLGDALMSAATRVVATDADFGARQTLYAASQDLPGDSFVGPR 252 (291)
T ss_dssp HHHHHHHHHHHHHTTCCCEEEEECCSGGGSCC--------------------CHHHHHHHHHHHHHHHSCCCTTCEEEET
T ss_pred HHHHHHHHHHHhhCCCCEEEEEeeCCCCccccccccchHHHHHHHHHHHHHHhCCHHHHHHHHHHHHcCCCCCCceeCCc
Confidence 1111112233345 99999999996533221110000 000011122358999999999999876778888886
Q ss_pred cC
Q 021854 285 NG 286 (306)
Q Consensus 285 ~g 286 (306)
+|
T Consensus 253 gG 254 (291)
T 3rd5_A 253 FG 254 (291)
T ss_dssp TS
T ss_pred cc
Confidence 54
|
| >2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.74 E-value=1.1e-17 Score=148.45 Aligned_cols=190 Identities=13% Similarity=0.109 Sum_probs=128.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcC-CCceeeeccCCCHHHHHHHh---cCccEEEEcCCc
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG-TYVESMAGDASNKKFLKTAL---RGVRSIICPSEG 173 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~-~~v~~v~~D~~d~~~l~~~~---~~~d~vi~~~~g 173 (306)
.+|+++||||+|+||++++++|+++|++|+++.|+.++..+... .++.++.+|++|.+++++++ .++|++||+++.
T Consensus 5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~lv~~Ag~ 84 (246)
T 2ag5_A 5 DGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQTRVLDVTKKKQIDQFANEVERLDVLFNVAGF 84 (246)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGGSTTEEEEECCTTCHHHHHHHHHHCSCCSEEEECCCC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhccCceEEEeeCCCHHHHHHHHHHhCCCCEEEECCcc
Confidence 47899999999999999999999999999999999876543321 26788999999999887664 478999998431
Q ss_pred h--------------------------hhh----cccccCCCEEEEecCcccccCCC-CcccccchHHHH--HHHHHHHH
Q 021854 174 F--------------------------ISN----AGSLKGVQHVILLSQLSVYRGSG-GIQALMKGNARK--LAEQDESM 220 (306)
Q Consensus 174 ~--------------------------~~~----~a~~~gvkr~V~iSS~~~~~~~~-~~~~~~~~~a~~--~~~~aE~~ 220 (306)
. +.+ .+.+.+.++||++||..++.+.. +...|..+++.. +.+.....
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e 164 (246)
T 2ag5_A 85 VHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLTKSVAAD 164 (246)
T ss_dssp CCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCTTBHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechHhCcCCCCCCccHHHHHHHHHHHHHHHHHH
Confidence 0 011 12345678999999988776544 455565443321 11111122
Q ss_pred HHhcCCCEEEEEcCcccCCCCCC--------cce--eeecCCCCccccCHHHHHHHHHHHhhCCC--CCCcEEEEecCC
Q 021854 221 LMASGIPYTIIRTGVLQNTPGGK--------QGF--QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVNGE 287 (306)
Q Consensus 221 l~~sgi~~tiiRPg~l~~~~~~~--------~~~--~~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~~~v~~g~ 287 (306)
+...++++++||||++....... ... .+........+.+++|+|++++.++.++. ..|+.+.+.+|.
T Consensus 165 ~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~v~~l~s~~~~~~tG~~i~vdgG~ 243 (246)
T 2ag5_A 165 FIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTGRFATAEEIAMLCVYLASDESAYVTGNPVIIDGGW 243 (246)
T ss_dssp HGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCTTSSCEEHHHHHHHHHHHHSGGGTTCCSCEEEECTTG
T ss_pred hhhcCcEEEEEeeCcCcCcchhhhhhcccCcHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCc
Confidence 33469999999999864321000 000 01011122346789999999999997543 468999998763
|
| >3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=1.7e-17 Score=147.52 Aligned_cols=191 Identities=18% Similarity=0.207 Sum_probs=134.0
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhh---hcCCCceeeeccCCCHHHHHHHhc-------CccE
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALR-------GVRS 166 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~---~~~~~v~~v~~D~~d~~~l~~~~~-------~~d~ 166 (306)
..+|+++||||+|+||++++++|+++|++|+++.|+.++..+ ..+.++.++.+|++|.++++++++ ++|+
T Consensus 4 l~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~ 83 (247)
T 3rwb_A 4 LAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKARAIAADISDPGSVKALFAEIQALTGGIDI 83 (247)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEECCCCTTCHHHHHHHHHHHHHHHSCCSE
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCE
Confidence 457999999999999999999999999999999999876433 235678999999999998888776 6899
Q ss_pred EEEcCCch--------------------------hhh----cccccC-CCEEEEecCcccccCCCCcccccchHHHH--H
Q 021854 167 IICPSEGF--------------------------ISN----AGSLKG-VQHVILLSQLSVYRGSGGIQALMKGNARK--L 213 (306)
Q Consensus 167 vi~~~~g~--------------------------~~~----~a~~~g-vkr~V~iSS~~~~~~~~~~~~~~~~~a~~--~ 213 (306)
+||+++.. +.+ .+++.+ ..+||++||..++.+..+...|..+++.. +
T Consensus 84 lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~ 163 (247)
T 3rwb_A 84 LVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAGTPNMAAYVAAKGGVIGF 163 (247)
T ss_dssp EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHTCTTCHHHHHHHHHHHHH
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhccCCCCchhhHHHHHHHHHH
Confidence 99984410 111 133444 67999999998887777777776544321 1
Q ss_pred HHHHHHHHHhcCCCEEEEEcCcccCCCC----CCcceeeecC-CCCccccCHHHHHHHHHHHhhCCC--CCCcEEEEecC
Q 021854 214 AEQDESMLMASGIPYTIIRTGVLQNTPG----GKQGFQFEEG-CAANGSLSKEDAAFICVEALESIP--QTGLIFEVVNG 286 (306)
Q Consensus 214 ~~~aE~~l~~sgi~~tiiRPg~l~~~~~----~~~~~~~~~g-~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~~~v~~g 286 (306)
.+.....+...+++++.|+||++..... ......+... .....+.+++|+|++++.++.+.. -.|+++++.+|
T Consensus 164 ~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~r~~~pedva~~v~~L~s~~~~~itG~~i~vdGG 243 (247)
T 3rwb_A 164 TRALATELGKYNITANAVTPGLIESDGVKASPHNEAFGFVEMLQAMKGKGQPEHIADVVSFLASDDARWITGQTLNVDAG 243 (247)
T ss_dssp HHHHHHHHGGGTEEEEEEEECSBCCHHHHTSGGGGGHHHHHHHSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred HHHHHHHhhhcCeEEEEEeeCcCcCccccccChhHHHHHHhcccccCCCcCHHHHHHHHHHHhCccccCCCCCEEEECCC
Confidence 2222223445799999999998643210 0000000000 122346789999999999987643 46899999877
Q ss_pred C
Q 021854 287 E 287 (306)
Q Consensus 287 ~ 287 (306)
-
T Consensus 244 ~ 244 (247)
T 3rwb_A 244 M 244 (247)
T ss_dssp S
T ss_pred c
Confidence 4
|
| >3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=1.6e-17 Score=148.71 Aligned_cols=191 Identities=14% Similarity=0.120 Sum_probs=131.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEE-ecCcchhhh------hcCCCceeeeccCCCHHHHHHHhc-------C
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKAL-VKDKRNAME------SFGTYVESMAGDASNKKFLKTALR-------G 163 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l-~R~~~~~~~------~~~~~v~~v~~D~~d~~~l~~~~~-------~ 163 (306)
.+|+++||||+|+||++++++|+++|++|+++ .|+.++..+ ..+.++.++.+|++|.++++++++ .
T Consensus 3 ~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 82 (258)
T 3oid_A 3 QNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETFGR 82 (258)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 46899999999999999999999999999997 777765322 124578899999999988887775 4
Q ss_pred ccEEEEcCCch--------------------------h----hhcccccCCCEEEEecCcccccCCCCcccccchHHHHH
Q 021854 164 VRSIICPSEGF--------------------------I----SNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKL 213 (306)
Q Consensus 164 ~d~vi~~~~g~--------------------------~----~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~~ 213 (306)
+|++||+++.. + ...+++.+..+||++||..++.+..+...|..+++...
T Consensus 83 id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~ 162 (258)
T 3oid_A 83 LDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIVSISSLGSIRYLENYTTVGVSKAALE 162 (258)
T ss_dssp CCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEEEEGGGTSBCTTCHHHHHHHHHHH
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhCCCCCCcHHHHHHHHHHH
Confidence 59999985310 1 11234456789999999998877766667755433211
Q ss_pred --HHHHHHHHHhcCCCEEEEEcCcccCCCCCCc---c-e--eeecCCCCccccCHHHHHHHHHHHhhCCC--CCCcEEEE
Q 021854 214 --AEQDESMLMASGIPYTIIRTGVLQNTPGGKQ---G-F--QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEV 283 (306)
Q Consensus 214 --~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~~---~-~--~~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~~~v 283 (306)
.+.....+...+++++.|+||++........ . . .+........+.+++|+|++++.++.+.. ..|++++|
T Consensus 163 ~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v~~L~s~~~~~itG~~i~v 242 (258)
T 3oid_A 163 ALTRYLAVELSPKQIIVNAVSGGAIDTDALKHFPNREDLLEDARQNTPAGRMVEIKDMVDTVEFLVSSKADMIRGQTIIV 242 (258)
T ss_dssp HHHHHHHHHTGGGTEEEEEEEECCBCSGGGGGCTTHHHHHHHHHHHCTTSSCBCHHHHHHHHHHHTSSTTTTCCSCEEEE
T ss_pred HHHHHHHHHHhhcCcEEEEEeeCCCcChhhhhcccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcccCCccCCEEEE
Confidence 1111122234689999999998653221100 0 0 00111222456789999999999997654 46899999
Q ss_pred ecCCc
Q 021854 284 VNGEE 288 (306)
Q Consensus 284 ~~g~~ 288 (306)
.+|..
T Consensus 243 dGG~~ 247 (258)
T 3oid_A 243 DGGRS 247 (258)
T ss_dssp STTGG
T ss_pred CCCcc
Confidence 98753
|
| >3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=99.74 E-value=3.6e-17 Score=149.41 Aligned_cols=192 Identities=18% Similarity=0.155 Sum_probs=131.0
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh---c---C-CCceeeeccCCCHHHHHHHhc------
Q 021854 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---F---G-TYVESMAGDASNKKFLKTALR------ 162 (306)
Q Consensus 96 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~---~---~-~~v~~v~~D~~d~~~l~~~~~------ 162 (306)
...+|+|+||||+|+||++++++|+++|++|+++.|+.++..+. + + .++.++.+|++|.++++++++
T Consensus 38 ~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 117 (293)
T 3rih_A 38 DLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDAF 117 (293)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHHHc
Confidence 44679999999999999999999999999999999998764321 1 2 468899999999988777664
Q ss_pred -CccEEEEcCCch--------------------------hhhc----ccccCCCEEEEecCcccc-cCCCCcccccchHH
Q 021854 163 -GVRSIICPSEGF--------------------------ISNA----GSLKGVQHVILLSQLSVY-RGSGGIQALMKGNA 210 (306)
Q Consensus 163 -~~d~vi~~~~g~--------------------------~~~~----a~~~gvkr~V~iSS~~~~-~~~~~~~~~~~~~a 210 (306)
.+|++||+++.. +.++ +++.+..+||++||..+. .+..+...|..+++
T Consensus 118 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iV~isS~~~~~~~~~~~~~Y~asKa 197 (293)
T 3rih_A 118 GALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGPVTGYPGWSHYGASKA 197 (293)
T ss_dssp SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHSSCEEEEECCSBTTTBBCTTCHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEeChhhccCCCCCCHHHHHHHH
Confidence 679999984310 1111 245677899999998875 55555556655433
Q ss_pred HH--HHHHHHHHHHhcCCCEEEEEcCcccCCCC--CCcce--eeecCCCCccccCHHHHHHHHHHHhhCCC--CCCcEEE
Q 021854 211 RK--LAEQDESMLMASGIPYTIIRTGVLQNTPG--GKQGF--QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFE 282 (306)
Q Consensus 211 ~~--~~~~aE~~l~~sgi~~tiiRPg~l~~~~~--~~~~~--~~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~~~ 282 (306)
.. +.+.....+...||+++.|+||++..... ..... .+........+.+++|+|++++.++.+.. -.|+++.
T Consensus 198 a~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~fL~s~~a~~itG~~i~ 277 (293)
T 3rih_A 198 AQLGFMRTAAIELAPRGVTVNAILPGNILTEGLVDMGEEYISGMARSIPMGMLGSPVDIGHLAAFLATDEAGYITGQAIV 277 (293)
T ss_dssp HHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHTCHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred HHHHHHHHHHHHHhhhCeEEEEEecCCCcCcchhhccHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCccccCCCCCEEE
Confidence 21 11222222345799999999998653211 00000 01111222345688999999999986543 4689999
Q ss_pred EecCC
Q 021854 283 VVNGE 287 (306)
Q Consensus 283 v~~g~ 287 (306)
|.+|.
T Consensus 278 vdGG~ 282 (293)
T 3rih_A 278 VDGGQ 282 (293)
T ss_dssp ESTTT
T ss_pred ECCCc
Confidence 99875
|
| >4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.74 E-value=1.6e-17 Score=149.29 Aligned_cols=192 Identities=15% Similarity=0.091 Sum_probs=132.6
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhh-------hcCCCceeeeccCCCHHHHHHHhc------
Q 021854 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME-------SFGTYVESMAGDASNKKFLKTALR------ 162 (306)
Q Consensus 96 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~-------~~~~~v~~v~~D~~d~~~l~~~~~------ 162 (306)
...+|+++||||+|+||++++++|+++|++|+++.|+.++..+ ..+.++.++.+|++|.++++++++
T Consensus 17 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 96 (266)
T 4egf_A 17 RLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAEAF 96 (266)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 3457999999999999999999999999999999999876332 135678999999999888777665
Q ss_pred -CccEEEEcCCch--------------------------hh----hcccccC-CCEEEEecCcccccCCCCcccccchHH
Q 021854 163 -GVRSIICPSEGF--------------------------IS----NAGSLKG-VQHVILLSQLSVYRGSGGIQALMKGNA 210 (306)
Q Consensus 163 -~~d~vi~~~~g~--------------------------~~----~~a~~~g-vkr~V~iSS~~~~~~~~~~~~~~~~~a 210 (306)
++|++||+++.. +. ..+.+.+ ..+||++||..++.+..+...|..+++
T Consensus 97 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~ 176 (266)
T 4egf_A 97 GGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALAPLPDHYAYCTSKA 176 (266)
T ss_dssp TSCSEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhccCCCCChHHHHHHH
Confidence 789999984310 01 1122233 469999999998877777667765443
Q ss_pred HH--HHHHHHHHHHhcCCCEEEEEcCcccCCCC----CCcc--eeeecCCCCccccCHHHHHHHHHHHhhCC--CCCCcE
Q 021854 211 RK--LAEQDESMLMASGIPYTIIRTGVLQNTPG----GKQG--FQFEEGCAANGSLSKEDAAFICVEALESI--PQTGLI 280 (306)
Q Consensus 211 ~~--~~~~aE~~l~~sgi~~tiiRPg~l~~~~~----~~~~--~~~~~g~~~~~~Is~~DVA~~iv~aL~~~--~~~g~~ 280 (306)
.. +.+.....+...+|+++.|+||++..... .... ..+........+.+++|||+++++++.+. .-.|++
T Consensus 177 a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v~~L~s~~~~~itG~~ 256 (266)
T 4egf_A 177 GLVMATKVLARELGPHGIRANSVCPTVVLTEMGQRVWGDEAKSAPMIARIPLGRFAVPHEVSDAVVWLASDAASMINGVD 256 (266)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEESCBCSHHHHHHTCSHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred HHHHHHHHHHHHHhhhCeEEEEEEeCCCcCchhhhhccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCccCcE
Confidence 21 11222222345799999999998653211 0000 00111122234678999999999998754 346899
Q ss_pred EEEecCC
Q 021854 281 FEVVNGE 287 (306)
Q Consensus 281 ~~v~~g~ 287 (306)
++|.+|.
T Consensus 257 i~vdGG~ 263 (266)
T 4egf_A 257 IPVDGGY 263 (266)
T ss_dssp EEESTTG
T ss_pred EEECCCc
Confidence 9998774
|
| >3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.74 E-value=8.3e-17 Score=146.12 Aligned_cols=190 Identities=17% Similarity=0.188 Sum_probs=128.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh------cCCCceeeeccCCCHHHHHHHhc-------Cc
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GV 164 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~~~-------~~ 164 (306)
.+++++||||+|+||++++++|+++|++|+++.|+.++..+. .+..+.++.+|++|.++++++++ .+
T Consensus 27 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 106 (283)
T 3v8b_A 27 PSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVLKFGHL 106 (283)
T ss_dssp CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 468999999999999999999999999999999998763321 23478899999999988887765 68
Q ss_pred cEEEEcCCc-----h----------------------hhhc----ccccCCCEEEEecCccccc--CCCCcccccchHHH
Q 021854 165 RSIICPSEG-----F----------------------ISNA----GSLKGVQHVILLSQLSVYR--GSGGIQALMKGNAR 211 (306)
Q Consensus 165 d~vi~~~~g-----~----------------------~~~~----a~~~gvkr~V~iSS~~~~~--~~~~~~~~~~~~a~ 211 (306)
|++||+++. . +.++ +++.+.++||++||..+.. +..+...|..+++.
T Consensus 107 D~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~~~Y~asKaa 186 (283)
T 3v8b_A 107 DIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRGGGAIVVVSSINGTRTFTTPGATAYTATKAA 186 (283)
T ss_dssp CEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCSTTCHHHHHHHHH
T ss_pred CEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCceEEEEcChhhccCCCCCCchHHHHHHHH
Confidence 999998431 0 1111 2456678999999988765 44555566544332
Q ss_pred HH--HHHHHHHHHhcCCCEEEEEcCcccCCCCCCcc----------eeeecCC-CC--ccccCHHHHHHHHHHHhhCCC-
Q 021854 212 KL--AEQDESMLMASGIPYTIIRTGVLQNTPGGKQG----------FQFEEGC-AA--NGSLSKEDAAFICVEALESIP- 275 (306)
Q Consensus 212 ~~--~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~~~----------~~~~~g~-~~--~~~Is~~DVA~~iv~aL~~~~- 275 (306)
.. .+.....+...+|+++.|+||++......... ....... .. ..+.+++|||++++.++.+..
T Consensus 187 ~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~r~~~pedvA~~v~fL~s~~a~ 266 (283)
T 3v8b_A 187 QVAIVQQLALELGKHHIRVNAVCPGAIETNISDNTKLRHEEETAIPVEWPKGQVPITDGQPGRSEDVAELIRFLVSERAR 266 (283)
T ss_dssp HHHHHHHHHHHTTTTTEEEEEEEECSBSSCTTCCTTBCCHHHHSCCCBCTTCSCGGGTTCCBCHHHHHHHHHHHTSGGGT
T ss_pred HHHHHHHHHHHhCccCcEEEEEEeCCCcCCcccccccccchhhhhhhhhhhhcCccccCCCCCHHHHHHHHHHHcCcccc
Confidence 11 11111112246899999999986533221110 0000000 11 234688999999999987543
Q ss_pred -CCCcEEEEecCC
Q 021854 276 -QTGLIFEVVNGE 287 (306)
Q Consensus 276 -~~g~~~~v~~g~ 287 (306)
-.|+++.|.+|.
T Consensus 267 ~itG~~i~vdGG~ 279 (283)
T 3v8b_A 267 HVTGSPVWIDGGQ 279 (283)
T ss_dssp TCCSCEEEESTTH
T ss_pred CCcCCEEEECcCc
Confidence 468999998774
|
| >3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.74 E-value=1.9e-17 Score=149.88 Aligned_cols=191 Identities=18% Similarity=0.115 Sum_probs=133.1
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhh---hcCCCceeeeccCCCHHHHHHHhc-------CccE
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALR-------GVRS 166 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~---~~~~~v~~v~~D~~d~~~l~~~~~-------~~d~ 166 (306)
..+|+++||||+|+||++++++|+++|++|+++.|+.++..+ ..+..+.++.+|++|.++++++++ ++|+
T Consensus 27 l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~ 106 (277)
T 3gvc_A 27 LAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIGCGAAACRVDVSDEQQIIAMVDACVAAFGGVDK 106 (277)
T ss_dssp CTTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCSSCEEEECCTTCHHHHHHHHHHHHHHHSSCCE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCcceEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 457999999999999999999999999999999999876432 345678999999999988877765 6799
Q ss_pred EEEcCCch------------------------------hhhcccccCCCEEEEecCcccccCCCCcccccchHHHH--HH
Q 021854 167 IICPSEGF------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK--LA 214 (306)
Q Consensus 167 vi~~~~g~------------------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~--~~ 214 (306)
+||+++.. ....+.+.+..+||++||..++.+..+...|..+++.. +.
T Consensus 107 lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~l~ 186 (277)
T 3gvc_A 107 LVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQVAVGGTGAYGMSKAGIIQLS 186 (277)
T ss_dssp EEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHH
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCCchhHHHHHHHHHHHH
Confidence 99984410 11113345677999999999887777766776544322 11
Q ss_pred HHHHHHHHhcCCCEEEEEcCcccCCCC-----CCc-cee--eec---CCCCccccCHHHHHHHHHHHhhCCC--CCCcEE
Q 021854 215 EQDESMLMASGIPYTIIRTGVLQNTPG-----GKQ-GFQ--FEE---GCAANGSLSKEDAAFICVEALESIP--QTGLIF 281 (306)
Q Consensus 215 ~~aE~~l~~sgi~~tiiRPg~l~~~~~-----~~~-~~~--~~~---g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~~ 281 (306)
+.....+...+++++.|+||++..... ... ... ... ......+.+++|||++++.++.+.. -.|+++
T Consensus 187 ~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~~L~s~~a~~itG~~i 266 (277)
T 3gvc_A 187 RITAAELRSSGIRSNTLLPAFVDTPMQQTAMAMFDGALGAGGARSMIARLQGRMAAPEEMAGIVVFLLSDDASMITGTTQ 266 (277)
T ss_dssp HHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTCC------CCHHHHHHHHHSSCBCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred HHHHHHhcccCeEEEEEeeCCccCchHHHhhhcchhhHHHHhhhhhhhccccCCCCHHHHHHHHHHHcCCccCCccCcEE
Confidence 222222345799999999998643210 000 000 000 0111346789999999999997543 468999
Q ss_pred EEecCC
Q 021854 282 EVVNGE 287 (306)
Q Consensus 282 ~v~~g~ 287 (306)
+|.+|.
T Consensus 267 ~vdGG~ 272 (277)
T 3gvc_A 267 IADGGT 272 (277)
T ss_dssp EESTTG
T ss_pred EECCcc
Confidence 999875
|
| >3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.74 E-value=4.6e-17 Score=146.03 Aligned_cols=190 Identities=12% Similarity=0.095 Sum_probs=133.1
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh------cCCCceeeeccCCCHHHHHHHhc-------C
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------G 163 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~~~-------~ 163 (306)
..+|+++||||+|+||++++++|+++|++|+++.|+.++..+. .+.++.++.+|++|.++++++++ .
T Consensus 9 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 88 (264)
T 3ucx_A 9 LTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKAYGR 88 (264)
T ss_dssp TTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTSC
T ss_pred cCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 4579999999999999999999999999999999998764321 24578899999999998887775 6
Q ss_pred ccEEEEcCCch---------------------------hhh----cccccCCCEEEEecCcccccCCCCcccccchHHHH
Q 021854 164 VRSIICPSEGF---------------------------ISN----AGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK 212 (306)
Q Consensus 164 ~d~vi~~~~g~---------------------------~~~----~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~ 212 (306)
+|++||+++.. +.+ .+.+.+ .+||++||..++.+......|..+++..
T Consensus 89 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~asKaa~ 167 (264)
T 3ucx_A 89 VDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESK-GAVVNVNSMVVRHSQAKYGAYKMAKSAL 167 (264)
T ss_dssp CSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHT-CEEEEECCGGGGCCCTTCHHHHHHHHHH
T ss_pred CcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEECcchhccCCCccHHHHHHHHHH
Confidence 79999984310 011 122334 7999999999888777776776544322
Q ss_pred --HHHHHHHHHHhcCCCEEEEEcCcccCCCCC------------C-cc--eeeecCCCCccccCHHHHHHHHHHHhhCCC
Q 021854 213 --LAEQDESMLMASGIPYTIIRTGVLQNTPGG------------K-QG--FQFEEGCAANGSLSKEDAAFICVEALESIP 275 (306)
Q Consensus 213 --~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~------------~-~~--~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~ 275 (306)
+.+.....+...+|+++.|+||++...... . .. ..+........+.+++|||+++++++.+..
T Consensus 168 ~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~L~s~~~ 247 (264)
T 3ucx_A 168 LAMSQTLATELGEKGIRVNSVLPGYIWGGTLKSYFEHQAGKYGTSVEDIYNAAAAGSDLKRLPTEDEVASAILFMASDLA 247 (264)
T ss_dssp HHHHHHHHHHHHTTTCEEEEEEESSCBSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSSSSSCCBHHHHHHHHHHHHSGGG
T ss_pred HHHHHHHHHHhCccCeEEEEEecCccccccHHHHHHhhhhhcCCCHHHHHHHHhccCCcccCCCHHHHHHHHHHHcCccc
Confidence 112222234457999999999986422100 0 00 001122233457789999999999987543
Q ss_pred --CCCcEEEEecCC
Q 021854 276 --QTGLIFEVVNGE 287 (306)
Q Consensus 276 --~~g~~~~v~~g~ 287 (306)
-.|+++++.+|.
T Consensus 248 ~~itG~~i~vdGG~ 261 (264)
T 3ucx_A 248 SGITGQALDVNCGE 261 (264)
T ss_dssp TTCCSCEEEESTTS
T ss_pred cCCCCCEEEECCCc
Confidence 468999999875
|
| >3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} | Back alignment and structure |
|---|
Probab=99.74 E-value=6.4e-17 Score=144.86 Aligned_cols=176 Identities=16% Similarity=0.093 Sum_probs=121.3
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh------cCCCceeeeccCCCHHHHHHHhc-------C
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------G 163 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~~~-------~ 163 (306)
..+++||||||+|+||++++++|+++|++|+++.|+.++..+. .+.++.++.+|++|.++++++++ .
T Consensus 27 l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 106 (262)
T 3rkr_A 27 LSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAAHGR 106 (262)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHhcCC
Confidence 4579999999999999999999999999999999998764322 24578899999999998887765 4
Q ss_pred ccEEEEcCCc-----h--------------------------hhhcccccCCCEEEEecCcccccCCCCcccccchHHHH
Q 021854 164 VRSIICPSEG-----F--------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK 212 (306)
Q Consensus 164 ~d~vi~~~~g-----~--------------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~ 212 (306)
+|++||+++. . +...+.+.+.++||++||..++.+..+...|..+++..
T Consensus 107 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~ 186 (262)
T 3rkr_A 107 CDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRGHIINISSLAGKNPVADGAAYTASKWGL 186 (262)
T ss_dssp CSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCEEEEECSSCSSCCCTTCHHHHHHHHHH
T ss_pred CCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCceEEEEechhhcCCCCCCchHHHHHHHH
Confidence 7999998442 0 01113346678999999999888777766776544321
Q ss_pred --HHHHHHHHHHhcCCCEEEEEcCcccCCCCCCcceeeecCCCCccccCHHHHHHHHHHHhhCCCC
Q 021854 213 --LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQ 276 (306)
Q Consensus 213 --~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~~~~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~~ 276 (306)
+.+.....+...+++++.|+||++......... ........++++|||++++.++.++..
T Consensus 187 ~~l~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~----~~~~~~~~~~p~dvA~~v~~l~s~~~~ 248 (262)
T 3rkr_A 187 NGLMTSAAEELRQHQVRVSLVAPGSVRTEFGVGLS----AKKSALGAIEPDDIADVVALLATQADQ 248 (262)
T ss_dssp HHHHHHHHHHHGGGTCEEEEEEECCC--------------------CCCHHHHHHHHHHHHTCCTT
T ss_pred HHHHHHHHHHhhhcCcEEEEEecCCCcCCcccccc----cccccccCCCHHHHHHHHHHHhcCccc
Confidence 112222223457999999999987543321110 111234578999999999999987543
|
| >1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=4.9e-17 Score=147.21 Aligned_cols=191 Identities=9% Similarity=0.042 Sum_probs=127.2
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchh-h------hhcCCCceeeeccCCCHHHHHHHhc-------
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-M------ESFGTYVESMAGDASNKKFLKTALR------- 162 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~-~------~~~~~~v~~v~~D~~d~~~l~~~~~------- 162 (306)
..+|+++||||+|+||++++++|+++|++|+++.|+.++. . ...+.++.++.+|++|.++++++++
T Consensus 27 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 106 (283)
T 1g0o_A 27 LEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFG 106 (283)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 4579999999999999999999999999999999987542 1 1124578889999999988777654
Q ss_pred CccEEEEcCCch--------------------------hhhcccc--cCCCEEEEecCcccccCCCC-cccccchHHHH-
Q 021854 163 GVRSIICPSEGF--------------------------ISNAGSL--KGVQHVILLSQLSVYRGSGG-IQALMKGNARK- 212 (306)
Q Consensus 163 ~~d~vi~~~~g~--------------------------~~~~a~~--~gvkr~V~iSS~~~~~~~~~-~~~~~~~~a~~- 212 (306)
++|++||+++.. +.+++.. .+.++||++||..+..+..+ ...|..+++..
T Consensus 107 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~asK~a~~ 186 (283)
T 1g0o_A 107 KLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAKAVPKHAVYSGSKGAIE 186 (283)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCSSCSSCHHHHHHHHHHH
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEechhhccCCCCCCcchHHHHHHHH
Confidence 689999984310 1122222 25689999999887665433 55565443321
Q ss_pred -HHHHHHHHHHhcCCCEEEEEcCcccCCCC---------CC---cce---eeec--CCCCccccCHHHHHHHHHHHhhCC
Q 021854 213 -LAEQDESMLMASGIPYTIIRTGVLQNTPG---------GK---QGF---QFEE--GCAANGSLSKEDAAFICVEALESI 274 (306)
Q Consensus 213 -~~~~aE~~l~~sgi~~tiiRPg~l~~~~~---------~~---~~~---~~~~--g~~~~~~Is~~DVA~~iv~aL~~~ 274 (306)
+.+.....+...+|++++|+||++..... .. ... .+.. ......+.+++|+|++++.++.+.
T Consensus 187 ~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~~ 266 (283)
T 1g0o_A 187 TFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPIDIARVVCFLASND 266 (283)
T ss_dssp HHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCTTCSCBCHHHHHHHHHHHHSGG
T ss_pred HHHHHHHHHhcccCeEEEEEecCcccchhhhhhhhhccccccccCHHHHHHHHhhcCCCCCCCcCHHHHHHHHHHHhCcc
Confidence 11112222335799999999998643210 00 000 0001 122234678999999999999754
Q ss_pred C--CCCcEEEEecCC
Q 021854 275 P--QTGLIFEVVNGE 287 (306)
Q Consensus 275 ~--~~g~~~~v~~g~ 287 (306)
. ..|+++.+.+|-
T Consensus 267 ~~~itG~~i~vdgG~ 281 (283)
T 1g0o_A 267 GGWVTGKVIGIDGGA 281 (283)
T ss_dssp GTTCCSCEEEESTTC
T ss_pred ccCcCCCEEEeCCCc
Confidence 3 468899998763
|
| >3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.73 E-value=2.7e-17 Score=146.07 Aligned_cols=188 Identities=17% Similarity=0.146 Sum_probs=110.3
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh------cCCCceeeeccCCCHHHHHHHhc-------C
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------G 163 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~~~-------~ 163 (306)
..+++++||||+|+||++++++|+++|++|+++.|+.++..+. .+..+.++.+|++|.++++++++ +
T Consensus 7 ~~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 86 (253)
T 3qiv_A 7 FENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAEFGG 86 (253)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 4579999999999999999999999999999999998764321 24568899999999998888776 7
Q ss_pred ccEEEEcCCc---h------------------------------hhhcccccCCCEEEEecCcccccCCCCcccccchHH
Q 021854 164 VRSIICPSEG---F------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA 210 (306)
Q Consensus 164 ~d~vi~~~~g---~------------------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a 210 (306)
+|++||+++- . +...+.+.+.++||++||..++. ....|..+++
T Consensus 87 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~---~~~~Y~asK~ 163 (253)
T 3qiv_A 87 IDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRGGGAIVNQSSTAAWL---YSNYYGLAKV 163 (253)
T ss_dssp CCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECC--------------CCHH
T ss_pred CCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEECCccccC---CCchhHHHHH
Confidence 8999998431 0 11123445678999999998873 2334544433
Q ss_pred HH--HHHHHHHHHHhcCCCEEEEEcCcccCCCCCC---cce--eeecCCCCccccCHHHHHHHHHHHhhCCC--CCCcEE
Q 021854 211 RK--LAEQDESMLMASGIPYTIIRTGVLQNTPGGK---QGF--QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIF 281 (306)
Q Consensus 211 ~~--~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~---~~~--~~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~~ 281 (306)
.. +.+.....+...+++++.|+||++....... ... .+..+.....+.+++|+|++++.++.+.. ..|++|
T Consensus 164 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~tG~~~ 243 (253)
T 3qiv_A 164 GINGLTQQLSRELGGRNIRINAIAPGPIDTEANRTTTPKEMVDDIVKGLPLSRMGTPDDLVGMCLFLLSDEASWITGQIF 243 (253)
T ss_dssp HHHHHHHHHHHHTTTTTEEEEEEEC-------------------------------CCHHHHHHHHHHSGGGTTCCSCEE
T ss_pred HHHHHHHHHHHHHhhcCeEEEEEEecCCcccchhhcCcHHHHHHHhccCCCCCCCCHHHHHHHHHHHcCccccCCCCCEE
Confidence 21 1111111223468999999999865332110 000 01111222345678999999999997543 368999
Q ss_pred EEecCC
Q 021854 282 EVVNGE 287 (306)
Q Consensus 282 ~v~~g~ 287 (306)
++.+|.
T Consensus 244 ~vdgG~ 249 (253)
T 3qiv_A 244 NVDGGQ 249 (253)
T ss_dssp EC----
T ss_pred EECCCe
Confidence 998875
|
| >3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=99.73 E-value=1.8e-17 Score=149.54 Aligned_cols=191 Identities=13% Similarity=0.108 Sum_probs=133.2
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhh------hcCCCceeeeccCCCHHHHHHHhc-------C
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTALR-------G 163 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~------~~~~~v~~v~~D~~d~~~l~~~~~-------~ 163 (306)
..+|+++||||+|+||++++++|+++|++|+++.|+.++..+ ..+.++..+.+|++|.++++++++ .
T Consensus 26 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 105 (270)
T 3ftp_A 26 LDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKEFGA 105 (270)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHHHcCC
Confidence 457999999999999999999999999999999998876332 124578899999999988887775 7
Q ss_pred ccEEEEcCCch--------------------------hhh----cccccCCCEEEEecCcccccCCCCcccccchHHHH-
Q 021854 164 VRSIICPSEGF--------------------------ISN----AGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK- 212 (306)
Q Consensus 164 ~d~vi~~~~g~--------------------------~~~----~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~- 212 (306)
+|++||+++-. +.+ .+.+.+..+||++||..++.+..+...|..+++..
T Consensus 106 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~ 185 (270)
T 3ftp_A 106 LNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSAGNPGQVNYAAAKAGVA 185 (270)
T ss_dssp CCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTBHHHHHHHHHHH
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCCCCchhHHHHHHHHH
Confidence 89999984410 111 12335667999999998887777777776544322
Q ss_pred -HHHHHHHHHHhcCCCEEEEEcCcccCCCCC----CcceeeecCCCCccccCHHHHHHHHHHHhhCCC--CCCcEEEEec
Q 021854 213 -LAEQDESMLMASGIPYTIIRTGVLQNTPGG----KQGFQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVN 285 (306)
Q Consensus 213 -~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~----~~~~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~~~v~~ 285 (306)
+.+.....+...+++++.|+||++...... .....+........+.+++|+|++++.++.... -.|++++|.+
T Consensus 186 ~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdG 265 (270)
T 3ftp_A 186 GMTRALAREIGSRGITVNCVAPGFIDTDMTKGLPQEQQTALKTQIPLGRLGSPEDIAHAVAFLASPQAGYITGTTLHVNG 265 (270)
T ss_dssp HHHHHHHHHHGGGTEEEEEEEECSBCSHHHHHSCHHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred HHHHHHHHHHhhhCeEEEEEEeCCCcCcchhhcCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCCCcCCccCcEEEECC
Confidence 112222223457899999999986432110 000001112223456789999999999986433 4689999988
Q ss_pred CC
Q 021854 286 GE 287 (306)
Q Consensus 286 g~ 287 (306)
|.
T Consensus 266 G~ 267 (270)
T 3ftp_A 266 GM 267 (270)
T ss_dssp TS
T ss_pred Cc
Confidence 75
|
| >1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.73 E-value=2.3e-17 Score=149.11 Aligned_cols=190 Identities=12% Similarity=0.100 Sum_probs=129.4
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh------cCC---CceeeeccCCCHHHHHHHhc-----
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGT---YVESMAGDASNKKFLKTALR----- 162 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~------~~~---~v~~v~~D~~d~~~l~~~~~----- 162 (306)
..+|+++||||+|+||++++++|+++|++|+++.|+.++..+. .+. ++.++.+|++|.++++++++
T Consensus 4 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 83 (280)
T 1xkq_A 4 FSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQ 83 (280)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHHh
Confidence 3578999999999999999999999999999999998764321 122 68889999999988887765
Q ss_pred --CccEEEEcCCc---------h---------------------hhh----cccccCCCEEEEecCcccccCC-CCcccc
Q 021854 163 --GVRSIICPSEG---------F---------------------ISN----AGSLKGVQHVILLSQLSVYRGS-GGIQAL 205 (306)
Q Consensus 163 --~~d~vi~~~~g---------~---------------------~~~----~a~~~gvkr~V~iSS~~~~~~~-~~~~~~ 205 (306)
.+|++||+++. . +.+ .+.+.+ ++||++||..++.+. .+...|
T Consensus 84 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~~Y 162 (280)
T 1xkq_A 84 FGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK-GEIVNVSSIVAGPQAQPDFLYY 162 (280)
T ss_dssp HSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGSSSCCCSSHHH
T ss_pred cCCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCC-CcEEEecCccccCCCCCcccHH
Confidence 68999998431 1 001 112234 899999999887665 555566
Q ss_pred cchHHHH--HHHHHHHHHHhcCCCEEEEEcCcccCCCCCCc-----------ce--eeecCCCCccccCHHHHHHHHHHH
Q 021854 206 MKGNARK--LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQ-----------GF--QFEEGCAANGSLSKEDAAFICVEA 270 (306)
Q Consensus 206 ~~~~a~~--~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~~-----------~~--~~~~g~~~~~~Is~~DVA~~iv~a 270 (306)
..+++.. +.+.....+...+++++.|+||++........ .. .+........+.+++|+|++++.+
T Consensus 163 ~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pedvA~~v~~l 242 (280)
T 1xkq_A 163 AIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIGAAGKPEHIANIILFL 242 (280)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhccCCeEEEEEeeCcCcCCcccccccccccccchHHHHHHHHcCCCCCCCCCHHHHHHHHHHh
Confidence 5543321 11222223445799999999998653211000 00 000111223467999999999999
Q ss_pred hhCC---CCCCcEEEEecCC
Q 021854 271 LESI---PQTGLIFEVVNGE 287 (306)
Q Consensus 271 L~~~---~~~g~~~~v~~g~ 287 (306)
+.++ ...|+.+++.+|.
T Consensus 243 ~s~~~~~~~tG~~i~vdgG~ 262 (280)
T 1xkq_A 243 ADRNLSFYILGQSIVADGGT 262 (280)
T ss_dssp HCHHHHTTCCSCEEEESTTG
T ss_pred cCcccccCccCCeEEECCCc
Confidence 8754 3568999998874
|
| >4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=3.1e-17 Score=148.29 Aligned_cols=191 Identities=13% Similarity=0.087 Sum_probs=133.2
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhh-------hcCCCceeeeccCCCHHHHHHHhc-------
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME-------SFGTYVESMAGDASNKKFLKTALR------- 162 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~-------~~~~~v~~v~~D~~d~~~l~~~~~------- 162 (306)
..+|+++||||+|+||++++++|+++|++|+++.|+.++..+ ..+.++.++.+|++|.++++++++
T Consensus 25 l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 104 (277)
T 4fc7_A 25 LRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKEFG 104 (277)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 467999999999999999999999999999999999865322 235578899999999988887765
Q ss_pred CccEEEEcCCch--------------------------hhhc----ccccCCCEEEEecCcccccCCCCcccccchHHHH
Q 021854 163 GVRSIICPSEGF--------------------------ISNA----GSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK 212 (306)
Q Consensus 163 ~~d~vi~~~~g~--------------------------~~~~----a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~ 212 (306)
.+|++||+++.. +.++ +.+.+..+||++||..++.+......|..+++..
T Consensus 105 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~ 184 (277)
T 4fc7_A 105 RIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGGVIVNITATLGNRGQALQVHAGSAKAAV 184 (277)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCSHHHHTCTTCHHHHHHHHHH
T ss_pred CCCEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCCCCcHHHHHHHHHH
Confidence 689999985410 1111 2334567999999998887766666675543321
Q ss_pred --HHHHHHHHHHhcCCCEEEEEcCcccCCCC-----CCcce--eeecCCCCccccCHHHHHHHHHHHhhCCC--CCCcEE
Q 021854 213 --LAEQDESMLMASGIPYTIIRTGVLQNTPG-----GKQGF--QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIF 281 (306)
Q Consensus 213 --~~~~aE~~l~~sgi~~tiiRPg~l~~~~~-----~~~~~--~~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~~ 281 (306)
+.+.....+...+|+++.|+||++..... ..... .+........+.+++|+|++++.++.+.. -.|+++
T Consensus 185 ~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~fL~s~~~~~itG~~i 264 (277)
T 4fc7_A 185 DAMTRHLAVEWGPQNIRVNSLAPGPISGTEGLRRLGGPQASLSTKVTASPLQRLGNKTEIAHSVLYLASPLASYVTGAVL 264 (277)
T ss_dssp HHHHHHHHHHHGGGTEEEEEEEECCBSSSHHHHHHSCCHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred HHHHHHHHHHhhhcCeEEEEEEECCEecchhhhhccCCHHHHHHHhccCCCCCCcCHHHHHHHHHHHcCCccCCcCCCEE
Confidence 11222222345689999999998753211 00000 01112222446789999999999997533 568999
Q ss_pred EEecCC
Q 021854 282 EVVNGE 287 (306)
Q Consensus 282 ~v~~g~ 287 (306)
.+.+|.
T Consensus 265 ~vdGG~ 270 (277)
T 4fc7_A 265 VADGGA 270 (277)
T ss_dssp EESTTH
T ss_pred EECCCc
Confidence 998774
|
| >3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=3.3e-16 Score=137.57 Aligned_cols=183 Identities=11% Similarity=-0.006 Sum_probs=124.3
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhh-------hcCCCceeeeccCCCHHHHHHHhc-------Cc
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME-------SFGTYVESMAGDASNKKFLKTALR-------GV 164 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~-------~~~~~v~~v~~D~~d~~~l~~~~~-------~~ 164 (306)
+|+++||||+|+||++++++|+++|++|+++.|+.++..+ ..+.++.++.+|++|.++++++++ .+
T Consensus 2 ~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i 81 (235)
T 3l77_A 2 MKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERFGDV 81 (235)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHHSSC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhcCCC
Confidence 5899999999999999999999999999999999876322 235678899999999999988876 67
Q ss_pred cEEEEcCCch--------------------------hhhccc---ccCCCEEEEecCcccccCCCCcccccchHHHHHHH
Q 021854 165 RSIICPSEGF--------------------------ISNAGS---LKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAE 215 (306)
Q Consensus 165 d~vi~~~~g~--------------------------~~~~a~---~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~~~~ 215 (306)
|++||+++-. +.+++. +.+..++|++||..+..+......|..+++....
T Consensus 82 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~sKaa~~~- 160 (235)
T 3l77_A 82 DVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRTGGLALVTTSDVSARLIPYGGGYVSTKWAARA- 160 (235)
T ss_dssp SEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSCCTTCHHHHHHHHHHHH-
T ss_pred CEEEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEEecchhcccCCCcchHHHHHHHHHH-
Confidence 9999984310 111111 1334678888887776665555566544332111
Q ss_pred HHHH-HHHhcCCCEEEEEcCcccCCCCCCcceeeecCCCCccccCHHHHHHHHHHHhhCCCC--CCcEEEEecC
Q 021854 216 QDES-MLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQ--TGLIFEVVNG 286 (306)
Q Consensus 216 ~aE~-~l~~sgi~~tiiRPg~l~~~~~~~~~~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~~--~g~~~~v~~g 286 (306)
.++. .+...+++++.|+||++......... .......+++++|+|++++.++.++.. .+++....++
T Consensus 161 ~~~~l~~~~~~i~v~~v~PG~v~T~~~~~~~----~~~~~~~~~~p~dva~~v~~l~~~~~~~~~~~~~~~~~~ 230 (235)
T 3l77_A 161 LVRTFQIENPDVRFFELRPGAVDTYFGGSKP----GKPKEKGYLKPDEIAEAVRCLLKLPKDVRVEELMLRSVY 230 (235)
T ss_dssp HHHHHHHHCTTSEEEEEEECSBSSSTTTCCS----CCCGGGTCBCHHHHHHHHHHHHTSCTTCCCCEEEECCTT
T ss_pred HHHHHhhcCCCeEEEEEeCCccccccccccC----CcccccCCCCHHHHHHHHHHHHcCCCCCccceEEEeecc
Confidence 1111 13346899999999987543322111 111123578999999999999988763 3444444433
|
| >1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.73 E-value=2.2e-17 Score=147.16 Aligned_cols=191 Identities=15% Similarity=0.167 Sum_probs=125.0
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhh-------hcCCCceeeeccCCCHHHHHHHhc-------
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME-------SFGTYVESMAGDASNKKFLKTALR------- 162 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~-------~~~~~v~~v~~D~~d~~~l~~~~~------- 162 (306)
.++++|+||||+|+||++++++|+++|++|+++.|+.++..+ ..+.++.++.+|++|.++++++++
T Consensus 12 ~~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 91 (265)
T 1h5q_A 12 FVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLG 91 (265)
T ss_dssp CTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSC
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHHHhcC
Confidence 356899999999999999999999999999999997654221 125578899999999988887765
Q ss_pred CccEEEEcCCch--------------------------hhhc----ccccC-CCEEEEecCcccccCCCC-------ccc
Q 021854 163 GVRSIICPSEGF--------------------------ISNA----GSLKG-VQHVILLSQLSVYRGSGG-------IQA 204 (306)
Q Consensus 163 ~~d~vi~~~~g~--------------------------~~~~----a~~~g-vkr~V~iSS~~~~~~~~~-------~~~ 204 (306)
.+|++||+++.. +.++ ..+.+ .++||++||..++.+... ...
T Consensus 92 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~ 171 (265)
T 1h5q_A 92 PISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVF 171 (265)
T ss_dssp SEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEETTEECSCHH
T ss_pred CCCEEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhccccccccccccccc
Confidence 379999984310 1111 12223 489999999877654321 233
Q ss_pred ccchHHHH--HHHHHHHHHHhcCCCEEEEEcCcccCCCCCC-cc-e--eeecCCCCccccCHHHHHHHHHHHhhCCC--C
Q 021854 205 LMKGNARK--LAEQDESMLMASGIPYTIIRTGVLQNTPGGK-QG-F--QFEEGCAANGSLSKEDAAFICVEALESIP--Q 276 (306)
Q Consensus 205 ~~~~~a~~--~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~-~~-~--~~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~ 276 (306)
|..+++.. +.+.....+...++++++||||++....... .. . .+........+.+++|+|++++.++.++. .
T Consensus 172 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~ 251 (265)
T 1h5q_A 172 YNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMDKKIRDHQASNIPLNRFAQPEEMTGQAILLLSDHATYM 251 (265)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSCHHHHHHHHHTCTTSSCBCGGGGHHHHHHHHSGGGTTC
T ss_pred cHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCccccccccccchhHHHHHHhcCcccCCCCHHHHHHHHHhhccCchhcC
Confidence 43322211 1111112223468999999999865332111 00 0 00111122346899999999999997643 4
Q ss_pred CCcEEEEecCC
Q 021854 277 TGLIFEVVNGE 287 (306)
Q Consensus 277 ~g~~~~v~~g~ 287 (306)
.|++|++.+|.
T Consensus 252 ~G~~~~v~gG~ 262 (265)
T 1h5q_A 252 TGGEYFIDGGQ 262 (265)
T ss_dssp CSCEEEECTTG
T ss_pred cCcEEEecCCE
Confidence 68999999874
|
| >1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.73 E-value=2.5e-17 Score=150.62 Aligned_cols=190 Identities=12% Similarity=0.112 Sum_probs=129.7
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh------cCC---CceeeeccCCCHHHHHHHhc-----
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGT---YVESMAGDASNKKFLKTALR----- 162 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~------~~~---~v~~v~~D~~d~~~l~~~~~----- 162 (306)
..+|+++||||+|+||++++++|+++|++|+++.|+.++..+. .+. ++.++.+|++|.++++++++
T Consensus 24 l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 103 (297)
T 1xhl_A 24 FSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAK 103 (297)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHHh
Confidence 4578999999999999999999999999999999998764321 122 68889999999998887775
Q ss_pred --CccEEEEcCCc-------h---------------------h----hhcccccCCCEEEEecCcccccCC-CCcccccc
Q 021854 163 --GVRSIICPSEG-------F---------------------I----SNAGSLKGVQHVILLSQLSVYRGS-GGIQALMK 207 (306)
Q Consensus 163 --~~d~vi~~~~g-------~---------------------~----~~~a~~~gvkr~V~iSS~~~~~~~-~~~~~~~~ 207 (306)
++|++||+++. + + ...+.+.+ ++||++||..++.+. .+...|..
T Consensus 104 ~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-g~IV~isS~~~~~~~~~~~~~Y~a 182 (297)
T 1xhl_A 104 FGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK-GEIVNVSSIVAGPQAHSGYPYYAC 182 (297)
T ss_dssp HSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGSSSCCTTSHHHHH
T ss_pred cCCCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CEEEEEcCchhccCCCCCcchHHH
Confidence 78999998431 1 0 01122345 899999999887665 55556654
Q ss_pred hHHHH--HHHHHHHHHHhcCCCEEEEEcCcccCCCCCCc-----------ce--eeecCCCCccccCHHHHHHHHHHHhh
Q 021854 208 GNARK--LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQ-----------GF--QFEEGCAANGSLSKEDAAFICVEALE 272 (306)
Q Consensus 208 ~~a~~--~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~~-----------~~--~~~~g~~~~~~Is~~DVA~~iv~aL~ 272 (306)
+++.. +.+.....+...++++++|+||++........ .. .+........+.+++|||++++.++.
T Consensus 183 sKaa~~~l~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~l~s 262 (297)
T 1xhl_A 183 AKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGKPEEIANIIVFLAD 262 (297)
T ss_dssp HHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcCccccccccccccccchHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC
Confidence 43321 11222222345799999999998653211000 00 00011112346789999999999997
Q ss_pred CC---CCCCcEEEEecCC
Q 021854 273 SI---PQTGLIFEVVNGE 287 (306)
Q Consensus 273 ~~---~~~g~~~~v~~g~ 287 (306)
++ ...|+++.+.+|.
T Consensus 263 ~~~~~~itG~~i~vdGG~ 280 (297)
T 1xhl_A 263 RNLSSYIIGQSIVADGGS 280 (297)
T ss_dssp HHHHTTCCSCEEEESTTG
T ss_pred CcccCCccCcEEEECCCc
Confidence 54 3568999999875
|
| >3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} | Back alignment and structure |
|---|
Probab=99.73 E-value=1.5e-16 Score=146.84 Aligned_cols=201 Identities=12% Similarity=0.115 Sum_probs=130.5
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh------cCC--CceeeeccCCCHHHHHHHhc------
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGT--YVESMAGDASNKKFLKTALR------ 162 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~------~~~--~v~~v~~D~~d~~~l~~~~~------ 162 (306)
..+++||||||+|+||++++++|+++|++|++++|+.++..+. .+. .+.++.+|++|.++++++++
T Consensus 6 l~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 85 (319)
T 3ioy_A 6 FAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEARF 85 (319)
T ss_dssp CTTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHhC
Confidence 3578999999999999999999999999999999998764321 122 68899999999998888775
Q ss_pred -CccEEEEcCCc-----h---------------------hh----hccccc------CCCEEEEecCcccccCCCCcccc
Q 021854 163 -GVRSIICPSEG-----F---------------------IS----NAGSLK------GVQHVILLSQLSVYRGSGGIQAL 205 (306)
Q Consensus 163 -~~d~vi~~~~g-----~---------------------~~----~~a~~~------gvkr~V~iSS~~~~~~~~~~~~~ 205 (306)
.+|++||+++- + +. ....+. +..+||++||..++.+......|
T Consensus 86 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~~~~~~~~Y 165 (319)
T 3ioy_A 86 GPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAAGSPGIY 165 (319)
T ss_dssp CCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTCCCSSSHHH
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEecccccccCCCCCHHH
Confidence 56999998441 0 01 111221 46789999999998877777777
Q ss_pred cchHHHH--HHHHHHHHHHhcCCCEEEEEcCcccCCCCCCc----ce----e-------eec-CCCCccccCHHHHHHHH
Q 021854 206 MKGNARK--LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQ----GF----Q-------FEE-GCAANGSLSKEDAAFIC 267 (306)
Q Consensus 206 ~~~~a~~--~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~~----~~----~-------~~~-g~~~~~~Is~~DVA~~i 267 (306)
..+++.. +.+.....+...++++++|+||++........ .. . ... .......++++|+|+.+
T Consensus 166 ~aSKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~vA~~~ 245 (319)
T 3ioy_A 166 NTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYIYASDDIRPDALKGEVKPVDKTAVERLAGVHEFGMEPDVIGARV 245 (319)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCBC-----------------------------CCGGGSSBCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhcCCEEEEEEcCeEccCcccccccCchhhcccccchhHHHHHHHHHhhhcCCCHHHHHHHH
Confidence 6554421 22222222445799999999998643221100 00 0 000 00011227999999999
Q ss_pred HHHhhCCCCCCcEEEEecCCcCHHHHHHHHHHHhh
Q 021854 268 VEALESIPQTGLIFEVVNGEEKVSDWKKCFSRLME 302 (306)
Q Consensus 268 v~aL~~~~~~g~~~~v~~g~~s~~d~~~l~~~l~~ 302 (306)
+.+++.+. .+. ..++.-...+.+.|.++..
T Consensus 246 ~~al~~~~----~~i-~~~~~~~~~~~~~~~~~~~ 275 (319)
T 3ioy_A 246 IEAMKANR----LHI-FSHPDHKEELREVFDEIIA 275 (319)
T ss_dssp HHHHHTTC----SEE-CCCSTTHHHHHHHHHHHHH
T ss_pred HHHHHcCC----CEE-EcCHHHHHHHHHHHHHHHH
Confidence 99998753 233 3344444556666666543
|
| >1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=5.8e-17 Score=145.92 Aligned_cols=189 Identities=14% Similarity=0.076 Sum_probs=127.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEec-Ccchhhhh---c----CCCceeeeccCCCH----HHHHHHhc---
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVK-DKRNAMES---F----GTYVESMAGDASNK----KFLKTALR--- 162 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R-~~~~~~~~---~----~~~v~~v~~D~~d~----~~l~~~~~--- 162 (306)
.+++++||||+|+||++++++|+++|++|+++.| +.++..+. . +.++.++.+|++|. ++++++++
T Consensus 10 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 89 (276)
T 1mxh_A 10 ECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSF 89 (276)
T ss_dssp -CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHHHHH
Confidence 4689999999999999999999999999999999 76553221 1 45788999999999 88877765
Q ss_pred ----CccEEEEcCCc----------------------h---------------hhhcccc---cCC------CEEEEecC
Q 021854 163 ----GVRSIICPSEG----------------------F---------------ISNAGSL---KGV------QHVILLSQ 192 (306)
Q Consensus 163 ----~~d~vi~~~~g----------------------~---------------~~~~a~~---~gv------kr~V~iSS 192 (306)
++|++||+++- . +.+++.. .+. ++||++||
T Consensus 90 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~g~iv~isS 169 (276)
T 1mxh_A 90 RAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCD 169 (276)
T ss_dssp HHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECC
T ss_pred HhcCCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHhcCCCCCCCCcEEEEECc
Confidence 78999998431 0 0111111 344 79999999
Q ss_pred cccccCCCCcccccchHHHH--HHHHHHHHHHhcCCCEEEEEcCcccCCCCCCccee---eecCCCCcc-ccCHHHHHHH
Q 021854 193 LSVYRGSGGIQALMKGNARK--LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQ---FEEGCAANG-SLSKEDAAFI 266 (306)
Q Consensus 193 ~~~~~~~~~~~~~~~~~a~~--~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~~~~~---~~~g~~~~~-~Is~~DVA~~ 266 (306)
..++.+..+...|..+++.. +.+.....+...+|++++|+||++... ....... +........ +.+++|+|++
T Consensus 170 ~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~PG~v~t~-~~~~~~~~~~~~~~~p~~r~~~~~~dva~~ 248 (276)
T 1mxh_A 170 AMTDLPLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLP-PAMPQETQEEYRRKVPLGQSEASAAQIADA 248 (276)
T ss_dssp GGGGSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCC-SSSCHHHHHHHHTTCTTTSCCBCHHHHHHH
T ss_pred hhhcCCCCCCeehHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCC-ccCCHHHHHHHHhcCCCCCCCCCHHHHHHH
Confidence 99887766666675544322 112222223446999999999987544 2110000 001111123 7899999999
Q ss_pred HHHHhhCCC--CCCcEEEEecCC
Q 021854 267 CVEALESIP--QTGLIFEVVNGE 287 (306)
Q Consensus 267 iv~aL~~~~--~~g~~~~v~~g~ 287 (306)
++.++.++. ..|+.+++.+|.
T Consensus 249 v~~l~s~~~~~~tG~~~~vdgG~ 271 (276)
T 1mxh_A 249 IAFLVSKDAGYITGTTLKVDGGL 271 (276)
T ss_dssp HHHHHSGGGTTCCSCEEEESTTG
T ss_pred HHHHhCccccCccCcEEEECCch
Confidence 999997543 368899998774
|
| >1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.73 E-value=5.4e-17 Score=146.43 Aligned_cols=180 Identities=19% Similarity=0.111 Sum_probs=119.8
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhc--------CCCceeeeccCCCHHHHHHHhc------
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF--------GTYVESMAGDASNKKFLKTALR------ 162 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~--------~~~v~~v~~D~~d~~~l~~~~~------ 162 (306)
..+++|+||||+|+||++++++|+++|++|+++.|+.++..+.. +..+.++.+|++|.++++++++
T Consensus 30 l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 109 (279)
T 1xg5_A 30 WRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQH 109 (279)
T ss_dssp GTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHhC
Confidence 45789999999999999999999999999999999986533211 2357788999999998887775
Q ss_pred -CccEEEEcCCch------------------------------hhhcccccCC--CEEEEecCccccc--CCCCcccccc
Q 021854 163 -GVRSIICPSEGF------------------------------ISNAGSLKGV--QHVILLSQLSVYR--GSGGIQALMK 207 (306)
Q Consensus 163 -~~d~vi~~~~g~------------------------------~~~~a~~~gv--kr~V~iSS~~~~~--~~~~~~~~~~ 207 (306)
++|+|||+++.. +...+++.++ ++||++||..++. +..+...|..
T Consensus 110 g~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~Y~~ 189 (279)
T 1xg5_A 110 SGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYSA 189 (279)
T ss_dssp CCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCSCGGGHHHHH
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCceEEEEcChhhcccCCCCCCchhHH
Confidence 789999984310 1123445565 7999999998873 3334445544
Q ss_pred hHHHH--HHHHHHHHHH--hcCCCEEEEEcCcccCCCC----CCcceeeecCCCCccccCHHHHHHHHHHHhhCCCC
Q 021854 208 GNARK--LAEQDESMLM--ASGIPYTIIRTGVLQNTPG----GKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQ 276 (306)
Q Consensus 208 ~~a~~--~~~~aE~~l~--~sgi~~tiiRPg~l~~~~~----~~~~~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~~ 276 (306)
+++.. +.+.....+. ..++++++|+||++..... ...............+++++|+|++++.++..+..
T Consensus 190 sK~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~i~~l~~~~~~ 266 (279)
T 1xg5_A 190 TKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDKDPEKAAATYEQMKCLKPEDVAEAVIYVLSTPAH 266 (279)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTTCHHHHHHHHC---CBCHHHHHHHHHHHHHSCTT
T ss_pred HHHHHHHHHHHHHHHHhhcCCCeEEEEEecCcccchhhhhhcccChhHHhhhcccccCCCHHHHHHHHHHHhcCCcc
Confidence 33321 1122222233 5689999999998653321 00000000001123468999999999999987653
|
| >2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=1.2e-16 Score=141.93 Aligned_cols=177 Identities=12% Similarity=0.115 Sum_probs=121.9
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh------cCCCceeeeccCCCHHHHHHHhc-------C
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------G 163 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~~~-------~ 163 (306)
.++++++||||+|+||++++++|+++|++|+++.|+.++..+. .+.++.++.+|++|.++++++++ +
T Consensus 5 l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~ 84 (247)
T 2jah_A 5 LQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEALGG 84 (247)
T ss_dssp TTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 3578999999999999999999999999999999998664321 14468889999999988887765 7
Q ss_pred ccEEEEcCCch--------------------------hh----hcccccCCCEEEEecCcccccCCCCcccccchHHHH-
Q 021854 164 VRSIICPSEGF--------------------------IS----NAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK- 212 (306)
Q Consensus 164 ~d~vi~~~~g~--------------------------~~----~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~- 212 (306)
+|++||+++-. +. ..+.+.+ ++||++||..++.+..+...|..+++..
T Consensus 85 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~asK~a~~ 163 (247)
T 2jah_A 85 LDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSK-GTVVQMSSIAGRVNVRNAAVYQATKFGVN 163 (247)
T ss_dssp CSEEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTCCCTTCHHHHHHHHHHH
T ss_pred CCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC-CEEEEEccHHhcCCCCCCcHHHHHHHHHH
Confidence 89999984310 11 1123345 8999999998877666666675544321
Q ss_pred -HHHHHHHHHHhcCCCEEEEEcCcccCCCCCCc--ce---ee-ecCCCCccccCHHHHHHHHHHHhhCCC
Q 021854 213 -LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQ--GF---QF-EEGCAANGSLSKEDAAFICVEALESIP 275 (306)
Q Consensus 213 -~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~~--~~---~~-~~g~~~~~~Is~~DVA~~iv~aL~~~~ 275 (306)
+.+.....+...|++++.|+||++........ .. .+ ... ....+++++|+|++++.++.++.
T Consensus 164 ~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~-~~~~~~~pedvA~~v~~l~s~~~ 232 (247)
T 2jah_A 164 AFSETLRQEVTERGVRVVVIEPGTTDTELRGHITHTATKEMYEQRI-SQIRKLQAQDIAEAVRYAVTAPH 232 (247)
T ss_dssp HHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCCCHHHHHHHHHHT-TTSCCBCHHHHHHHHHHHHHSCT
T ss_pred HHHHHHHHHhcccCcEEEEEECCCCCCcchhcccchhhHHHHHhcc-cccCCCCHHHHHHHHHHHhCCCc
Confidence 22222333455799999999998653321100 00 00 000 11124899999999999998654
|
| >1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=3.9e-17 Score=145.18 Aligned_cols=181 Identities=9% Similarity=0.068 Sum_probs=117.7
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCc----cEEEEcCCch-
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGV----RSIICPSEGF- 174 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~----d~vi~~~~g~- 174 (306)
|+|+||||+|+||++++++|+++|++|+++.|+.++... . +.+|++|.++++++++.+ |++||+++..
T Consensus 2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~------~-~~~Dl~~~~~v~~~~~~~~~~id~lv~~Ag~~~ 74 (257)
T 1fjh_A 2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIA------D-LSTAEGRKQAIADVLAKCSKGMDGLVLCAGLGP 74 (257)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC------C-TTSHHHHHHHHHHHHTTCTTCCSEEEECCCCCT
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhcc------c-cccCCCCHHHHHHHHHHhCCCCCEEEECCCCCC
Confidence 689999999999999999999999999999998866432 1 678999999999988654 9999984311
Q ss_pred ------------------hhh----cccccCCCEEEEecCccccc----------------------------CCCCccc
Q 021854 175 ------------------ISN----AGSLKGVQHVILLSQLSVYR----------------------------GSGGIQA 204 (306)
Q Consensus 175 ------------------~~~----~a~~~gvkr~V~iSS~~~~~----------------------------~~~~~~~ 204 (306)
+.+ .+.+.+.++||++||..++. +..+...
T Consensus 75 ~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (257)
T 1fjh_A 75 QTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQGGNLA 154 (257)
T ss_dssp TCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHHHHHHHTCCTTHHHHH
T ss_pred CcccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhhhccccccchhhhhhcccchhhhhhhhhcccCCCCccH
Confidence 111 22356678999999998872 1112233
Q ss_pred ccchHHHH--HHHHHHHHHHhcCCCEEEEEcCcccCCCCCCc---ce---eeec-CCCCccccCHHHHHHHHHHHhhCC-
Q 021854 205 LMKGNARK--LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQ---GF---QFEE-GCAANGSLSKEDAAFICVEALESI- 274 (306)
Q Consensus 205 ~~~~~a~~--~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~~---~~---~~~~-g~~~~~~Is~~DVA~~iv~aL~~~- 274 (306)
|..+++.. +.+.....+...++++++|+||++........ .. .... ......+.+++|+|++++.++..+
T Consensus 155 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~~~~~ 234 (257)
T 1fjh_A 155 YAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGESIAKFVPPMGRRAEPSEMASVIAFLMSPAA 234 (257)
T ss_dssp HHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC---------------------CCCSTTSCCCTHHHHHHHHHHTSGGG
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCccchhhccchhHHHHHHhcccccCCCCCHHHHHHHHHHHhCchh
Confidence 43322211 11111122334789999999998643221110 00 0000 112234688999999999999765
Q ss_pred -CCCCcEEEEecCC
Q 021854 275 -PQTGLIFEVVNGE 287 (306)
Q Consensus 275 -~~~g~~~~v~~g~ 287 (306)
...|+.+.+.+|.
T Consensus 235 ~~~tG~~~~vdgG~ 248 (257)
T 1fjh_A 235 SYVHGAQIVIDGGI 248 (257)
T ss_dssp TTCCSCEEEESTTH
T ss_pred cCCcCCEEEECCCc
Confidence 3468899998774
|
| >3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.73 E-value=3.8e-17 Score=146.06 Aligned_cols=191 Identities=17% Similarity=0.098 Sum_probs=126.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhh-------hcCCCceeeeccCCCHHHHHHHhc-------C
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME-------SFGTYVESMAGDASNKKFLKTALR-------G 163 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~-------~~~~~v~~v~~D~~d~~~l~~~~~-------~ 163 (306)
++++++||||+|+||++++++|+++|++|+++.|+.+...+ ..+.++.++.+|++|.++++++++ .
T Consensus 6 ~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 85 (264)
T 3i4f_A 6 FVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSHFGK 85 (264)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred ccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence 56899999999999999999999999999999887654211 123478899999999999888776 7
Q ss_pred ccEEEEcCC--c----h----------------------hhhc----ccccCCCEEEEecCcccc--cCCCCcccccchH
Q 021854 164 VRSIICPSE--G----F----------------------ISNA----GSLKGVQHVILLSQLSVY--RGSGGIQALMKGN 209 (306)
Q Consensus 164 ~d~vi~~~~--g----~----------------------~~~~----a~~~gvkr~V~iSS~~~~--~~~~~~~~~~~~~ 209 (306)
+|++||+++ . . +.++ +++.+..+||++||.++. .+......|..++
T Consensus 86 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~Y~asK 165 (264)
T 3i4f_A 86 IDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQNFGRIINYGFQGADSAPGWIYRSAFAAAK 165 (264)
T ss_dssp CCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTTGGGCCCCTTCHHHHHHH
T ss_pred CCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCeEEEEeechhcccCCCCCCchhHHHH
Confidence 899999854 1 0 1111 245677899999988544 2333334554433
Q ss_pred HHH--HHHHHHHHHHhcCCCEEEEEcCcccCCCCCCc-c---eeeecCCCCccccCHHHHHHHHHHHhhCCC--CCCcEE
Q 021854 210 ARK--LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQ-G---FQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIF 281 (306)
Q Consensus 210 a~~--~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~~-~---~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~~ 281 (306)
+.. +.+.....+...+++++.|+||++........ . ..+........+.+++|||++++.++.++. ..|+++
T Consensus 166 aa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v~~l~s~~~~~itG~~i 245 (264)
T 3i4f_A 166 VGLVSLTKTVAYEEAEYGITANMVCPGDIIGEMKEATIQEARQLKEHNTPIGRSGTGEDIARTISFLCEDDSDMITGTII 245 (264)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECCCCGGGGSCCHHHHHHC--------CCCCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred HHHHHHHHHHHHHhhhcCcEEEEEccCCccCccchhccHHHHHHHhhcCCCCCCcCHHHHHHHHHHHcCcccCCCCCcEE
Confidence 221 11111122334789999999998653321110 0 001111122346789999999999997643 468999
Q ss_pred EEecCCc
Q 021854 282 EVVNGEE 288 (306)
Q Consensus 282 ~v~~g~~ 288 (306)
++.+|-.
T Consensus 246 ~vdGG~~ 252 (264)
T 3i4f_A 246 EVTGAVD 252 (264)
T ss_dssp EESCSCC
T ss_pred EEcCcee
Confidence 9998753
|
| >3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=99.73 E-value=2e-17 Score=149.07 Aligned_cols=188 Identities=14% Similarity=0.139 Sum_probs=129.5
Q ss_pred CccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhc-------CccEE
Q 021854 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR-------GVRSI 167 (306)
Q Consensus 95 ~~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~-------~~d~v 167 (306)
....+|+||||||+|+||++++++|+++|++|+++.|+.+... ..+..+.+|++|.++++++++ .+|++
T Consensus 10 ~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~----~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~l 85 (269)
T 3vtz_A 10 EEFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDV----NVSDHFKIDVTNEEEVKEAVEKTTKKYGRIDIL 85 (269)
T ss_dssp CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--CT----TSSEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhcc----CceeEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 3446899999999999999999999999999999999886642 257788999999998887775 68999
Q ss_pred EEcCCch--------------------------h----hhcccccCCCEEEEecCcccccCCCCcccccchHHHHHH--H
Q 021854 168 ICPSEGF--------------------------I----SNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLA--E 215 (306)
Q Consensus 168 i~~~~g~--------------------------~----~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~~~--~ 215 (306)
||+++.. + ...+.+.+.++||++||..++.+......|..+++.... +
T Consensus 86 v~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~ 165 (269)
T 3vtz_A 86 VNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHGSIINIASVQSYAATKNAAAYVTSKHALLGLTR 165 (269)
T ss_dssp EECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBCTTCHHHHHHHHHHHHHHH
T ss_pred EECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCCCCChhHHHHHHHHHHHHH
Confidence 9984410 0 111334567899999999998877666677654332111 1
Q ss_pred HHHHHHHhcCCCEEEEEcCcccCCCC---------CCc----c--eeeecCCCCccccCHHHHHHHHHHHhhCCC--CCC
Q 021854 216 QDESMLMASGIPYTIIRTGVLQNTPG---------GKQ----G--FQFEEGCAANGSLSKEDAAFICVEALESIP--QTG 278 (306)
Q Consensus 216 ~aE~~l~~sgi~~tiiRPg~l~~~~~---------~~~----~--~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g 278 (306)
.....+. .+++++.|+||++..... ... . ..+........+.+++|||++++.++.+.. ..|
T Consensus 166 ~la~e~~-~~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~itG 244 (269)
T 3vtz_A 166 SVAIDYA-PKIRCNAVCPGTIMTPMVIKAAKMEVGEDENAVERKIEEWGRQHPMGRIGRPEEVAEVVAFLASDRSSFITG 244 (269)
T ss_dssp HHHHHHT-TTEEEEEEEECSBCCHHHHHHHHHHHCCSTTHHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred HHHHHhc-CCCEEEEEEECCCcCcchhhhhhccccccchhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCCccCCCcC
Confidence 1111122 389999999998643210 000 0 000111222346789999999999997543 468
Q ss_pred cEEEEecCC
Q 021854 279 LIFEVVNGE 287 (306)
Q Consensus 279 ~~~~v~~g~ 287 (306)
+++++.+|-
T Consensus 245 ~~i~vdGG~ 253 (269)
T 3vtz_A 245 ACLTVDGGL 253 (269)
T ss_dssp CEEEESTTG
T ss_pred cEEEECCCc
Confidence 999999875
|
| >1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A | Back alignment and structure |
|---|
Probab=99.73 E-value=2.7e-17 Score=146.15 Aligned_cols=186 Identities=13% Similarity=0.125 Sum_probs=123.7
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhc-------CccEEEE
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR-------GVRSIIC 169 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~-------~~d~vi~ 169 (306)
..+++|+||||+|+||++++++|+++|++|+++.|+.++..+. ..+.+|++|.++++++++ .+|++||
T Consensus 13 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~-----~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~ 87 (247)
T 1uzm_A 13 FVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGL-----FGVEVDVTDSDAVDRAFTAVEEHQGPVEVLVS 87 (247)
T ss_dssp CCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTTS-----EEEECCTTCHHHHHHHHHHHHHHHSSCSEEEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHh-----cCeeccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 4578999999999999999999999999999999988664322 247899999988887765 5799999
Q ss_pred cCCch--------------------------hhh----cccccCCCEEEEecCcccccCCCCcccccchHHHH--HHHHH
Q 021854 170 PSEGF--------------------------ISN----AGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK--LAEQD 217 (306)
Q Consensus 170 ~~~g~--------------------------~~~----~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~--~~~~a 217 (306)
+++.. +.+ .+++.+.++||++||..++.+..+...|..+++.. +.+..
T Consensus 88 ~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~l 167 (247)
T 1uzm_A 88 NAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGNQANYAASKAGVIGMARSI 167 (247)
T ss_dssp ECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-----CCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEECCHhhccCCCCChhHHHHHHHHHHHHHHH
Confidence 84310 111 12345778999999998876655556665543321 11222
Q ss_pred HHHHHhcCCCEEEEEcCcccCCCCC--Ccce--eeecCCCCccccCHHHHHHHHHHHhhCCC--CCCcEEEEecCC
Q 021854 218 ESMLMASGIPYTIIRTGVLQNTPGG--KQGF--QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVNGE 287 (306)
Q Consensus 218 E~~l~~sgi~~tiiRPg~l~~~~~~--~~~~--~~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~~~v~~g~ 287 (306)
...+...++++++|+||++...... .... .+........+.+++|+|++++.++..+. ..|+.+++.+|.
T Consensus 168 a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~~~~~G~~i~vdgG~ 243 (247)
T 1uzm_A 168 ARELSKANVTANVVAPGYIDTDMTRALDERIQQGALQFIPAKRVGTPAEVAGVVSFLASEDASYISGAVIPVDGGM 243 (247)
T ss_dssp HHHHGGGTEEEEEEEECSBCCHHHHHSCHHHHHHHGGGCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred HHHhhhcCcEEEEEEeCCCcccchhhcCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCCcCCEEEECCCc
Confidence 2223457999999999986432100 0000 00011112346899999999999997542 468999998774
|
| >4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.73 E-value=1.3e-16 Score=144.50 Aligned_cols=192 Identities=16% Similarity=0.122 Sum_probs=121.5
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEec-Ccchhhh------hcCCCceeeeccCCCHHHHHHHhc------
Q 021854 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVK-DKRNAME------SFGTYVESMAGDASNKKFLKTALR------ 162 (306)
Q Consensus 96 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R-~~~~~~~------~~~~~v~~v~~D~~d~~~l~~~~~------ 162 (306)
...+++++||||+|+||++++++|+++|++|+++.| +.++..+ ..+.++.++.+|++|.++++++++
T Consensus 26 ~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 105 (280)
T 4da9_A 26 QKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAEF 105 (280)
T ss_dssp CCCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHHH
T ss_pred ccCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 345789999999999999999999999999999986 4443221 124578899999999888877775
Q ss_pred -CccEEEEcCCc--h--------------------------h----hhcccccC---CCEEEEecCcccccCCCCccccc
Q 021854 163 -GVRSIICPSEG--F--------------------------I----SNAGSLKG---VQHVILLSQLSVYRGSGGIQALM 206 (306)
Q Consensus 163 -~~d~vi~~~~g--~--------------------------~----~~~a~~~g---vkr~V~iSS~~~~~~~~~~~~~~ 206 (306)
.+|++||+++. . + ...+.+.+ ..+||++||..++.+..+...|.
T Consensus 106 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~ 185 (280)
T 4da9_A 106 GRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVMTSPERLDYC 185 (280)
T ss_dssp SCCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC-------CCHHHH
T ss_pred CCCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhccCCCCccHHH
Confidence 78999998432 0 0 01122222 56899999998887766666675
Q ss_pred chHHHHH--HHHHHHHHHhcCCCEEEEEcCcccCCCCCCc-c---eeeec-CCCCccccCHHHHHHHHHHHhhCCC--CC
Q 021854 207 KGNARKL--AEQDESMLMASGIPYTIIRTGVLQNTPGGKQ-G---FQFEE-GCAANGSLSKEDAAFICVEALESIP--QT 277 (306)
Q Consensus 207 ~~~a~~~--~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~~-~---~~~~~-g~~~~~~Is~~DVA~~iv~aL~~~~--~~ 277 (306)
.+++... .+.....+...+|+++.|+||++........ . ..+.. ......+.+++|||++++.++.+.. ..
T Consensus 186 asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~it 265 (280)
T 4da9_A 186 MSKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDMTAAVSGKYDGLIESGLVPMRRWGEPEDIGNIVAGLAGGQFGFAT 265 (280)
T ss_dssp HHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC----------------------CCBCHHHHHHHHHHHHTSTTGGGT
T ss_pred HHHHHHHHHHHHHHHHHHHhCcEEEEEeecCCcCCchhhcchhHHHHHhhcCCCcCCcCCHHHHHHHHHHHhCccccCCC
Confidence 5443221 1112222334789999999998653321100 0 00101 1122346789999999999997654 46
Q ss_pred CcEEEEecCC
Q 021854 278 GLIFEVVNGE 287 (306)
Q Consensus 278 g~~~~v~~g~ 287 (306)
|++++|.+|-
T Consensus 266 G~~i~vdGG~ 275 (280)
T 4da9_A 266 GSVIQADGGL 275 (280)
T ss_dssp TCEEEESTTC
T ss_pred CCEEEECCCc
Confidence 8999998775
|
| >3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.73 E-value=2.8e-17 Score=146.28 Aligned_cols=193 Identities=13% Similarity=0.098 Sum_probs=130.4
Q ss_pred CccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEe-cCcchhhh------hcCCCceeeeccCCCHHHHHHHhc-----
Q 021854 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALV-KDKRNAME------SFGTYVESMAGDASNKKFLKTALR----- 162 (306)
Q Consensus 95 ~~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~-R~~~~~~~------~~~~~v~~v~~D~~d~~~l~~~~~----- 162 (306)
....+++||||||+|+||++++++|+++|++|+++. |+.++..+ ..+.++.++.+|++|.++++++++
T Consensus 9 ~~~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 88 (256)
T 3ezl_A 9 MVMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDKVKAE 88 (256)
T ss_dssp ----CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHHHHHh
Confidence 344689999999999999999999999999999988 55443211 124578899999999988887775
Q ss_pred --CccEEEEcCCch------------------------------hhhcccccCCCEEEEecCcccccCCCCcccccchHH
Q 021854 163 --GVRSIICPSEGF------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA 210 (306)
Q Consensus 163 --~~d~vi~~~~g~------------------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a 210 (306)
.+|++||+++.. +...+.+.+.++||++||..++.+..+...|..+++
T Consensus 89 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~ 168 (256)
T 3ezl_A 89 VGEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFGQTNYSTAKA 168 (256)
T ss_dssp TCCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCGGGSCSCCHHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhccCCCCCcccHHHHH
Confidence 679999984310 112234567789999999998887777777765543
Q ss_pred HH--HHHHHHHHHHhcCCCEEEEEcCcccCCCCCC-cce---eeecCCCCccccCHHHHHHHHHHHhhCC--CCCCcEEE
Q 021854 211 RK--LAEQDESMLMASGIPYTIIRTGVLQNTPGGK-QGF---QFEEGCAANGSLSKEDAAFICVEALESI--PQTGLIFE 282 (306)
Q Consensus 211 ~~--~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~-~~~---~~~~g~~~~~~Is~~DVA~~iv~aL~~~--~~~g~~~~ 282 (306)
.. +.+.....+...+++++.|+||++....... ... .+........+.+++|+|++++.++... ...|++++
T Consensus 169 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~tG~~i~ 248 (256)
T 3ezl_A 169 GIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIRPDVLEKIVATIPVRRLGSPDEIGSIVAWLASEESGFSTGADFS 248 (256)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred HHHHHHHHHHHHHHHhCCEEEEEEECcccCccccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCCcccCCcCcEEE
Confidence 22 1122222234578999999999864321100 000 0011112234678999999999998653 35689999
Q ss_pred EecCC
Q 021854 283 VVNGE 287 (306)
Q Consensus 283 v~~g~ 287 (306)
+.+|-
T Consensus 249 vdgG~ 253 (256)
T 3ezl_A 249 LNGGL 253 (256)
T ss_dssp ESTTS
T ss_pred ECCCE
Confidence 98774
|
| >4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A | Back alignment and structure |
|---|
Probab=99.73 E-value=1.7e-16 Score=141.84 Aligned_cols=192 Identities=13% Similarity=0.141 Sum_probs=130.8
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhh---hcCCCceeeeccCCCHHHHHHHhc-------CccE
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALR-------GVRS 166 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~---~~~~~v~~v~~D~~d~~~l~~~~~-------~~d~ 166 (306)
..+|+++||||+|+||++++++|+++|++|+++.|+.++..+ ..+.++.++.+|++|.++++++++ .+|+
T Consensus 6 l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~ 85 (255)
T 4eso_A 6 YQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPRVHALRSDIADLNEIAVLGAAAGQTLGAIDL 85 (255)
T ss_dssp TTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSSEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence 357999999999999999999999999999999999876433 234578899999999988876654 6799
Q ss_pred EEEcCCch--------------------------hhhcccc--cCCCEEEEecCcccccCCCCcccccchHHHH--HHHH
Q 021854 167 IICPSEGF--------------------------ISNAGSL--KGVQHVILLSQLSVYRGSGGIQALMKGNARK--LAEQ 216 (306)
Q Consensus 167 vi~~~~g~--------------------------~~~~a~~--~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~--~~~~ 216 (306)
+||+++-. +.+++.. ..-.+||++||..++.+..+...|..+++.. +.+.
T Consensus 86 lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~ 165 (255)
T 4eso_A 86 LHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSVADEGGHPGMSVYSASKAALVSFASV 165 (255)
T ss_dssp EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCGGGSSBCTTBHHHHHHHHHHHHHHHH
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECChhhcCCCCCchHHHHHHHHHHHHHHH
Confidence 99984310 1111111 1135899999999887776776776544321 1111
Q ss_pred HHHHHHhcCCCEEEEEcCcccCCCCCCccee----------eecCCCCccccCHHHHHHHHHHHhhCCC-CCCcEEEEec
Q 021854 217 DESMLMASGIPYTIIRTGVLQNTPGGKQGFQ----------FEEGCAANGSLSKEDAAFICVEALESIP-QTGLIFEVVN 285 (306)
Q Consensus 217 aE~~l~~sgi~~tiiRPg~l~~~~~~~~~~~----------~~~g~~~~~~Is~~DVA~~iv~aL~~~~-~~g~~~~v~~ 285 (306)
....+...|++++.|+||++........... .........+.+++|+|++++.++.+.. ..|+++++.+
T Consensus 166 la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~itG~~i~vdG 245 (255)
T 4eso_A 166 LAAELLPRGIRVNSVSPGFIDTPTKGVAGITEAERAEFKTLGDNITPMKRNGTADEVARAVLFLAFEATFTTGAKLAVDG 245 (255)
T ss_dssp HHHHTGGGTCEEEEEEECSBCCSSTTCTTSCHHHHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHHTCTTCCSCEEEEST
T ss_pred HHHHHhhhCcEEEEEecCcccCcccccccCChhhHHHHHHHHhccCCCCCCcCHHHHHHHHHHHcCcCcCccCCEEEECC
Confidence 2222334689999999998653321110000 0011122345689999999999987632 4689999998
Q ss_pred CCc
Q 021854 286 GEE 288 (306)
Q Consensus 286 g~~ 288 (306)
|..
T Consensus 246 G~~ 248 (255)
T 4eso_A 246 GLG 248 (255)
T ss_dssp TTT
T ss_pred Ccc
Confidence 753
|
| >3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.72 E-value=5.1e-17 Score=146.77 Aligned_cols=192 Identities=15% Similarity=0.127 Sum_probs=131.7
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchh---hh--hcCCCceeeeccCCCHHHHHHHhc------Cc
Q 021854 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA---ME--SFGTYVESMAGDASNKKFLKTALR------GV 164 (306)
Q Consensus 96 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~---~~--~~~~~v~~v~~D~~d~~~l~~~~~------~~ 164 (306)
...+|+++||||+|+||++++++|+++|++|+++.|+.... .+ ..+.++.++.+|++|.++++++.+ ++
T Consensus 28 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~g~i 107 (273)
T 3uf0_A 28 SLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDGVKEVADEIADGGGSAEAVVADLADLEGAANVAEELAATRRV 107 (273)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTHHHHHHHHHHTTTCEEEEEECCTTCHHHHHHHHHHHHHHSCC
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHhcCCC
Confidence 34579999999999999999999999999999999775321 11 123468899999999988776653 78
Q ss_pred cEEEEcCCch--------------------------hhh----cccccCCCEEEEecCcccccCCCCcccccchHHHH--
Q 021854 165 RSIICPSEGF--------------------------ISN----AGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK-- 212 (306)
Q Consensus 165 d~vi~~~~g~--------------------------~~~----~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~-- 212 (306)
|++||+++.. +.+ .+.+.+..+||++||..++.+..+...|..+++..
T Consensus 108 D~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~~~~Y~asKaa~~~ 187 (273)
T 3uf0_A 108 DVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASMLSFQGGRNVAAYAASKHAVVG 187 (273)
T ss_dssp CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSCHHHHHHHHHHHH
T ss_pred cEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchHhcCCCCCChhHHHHHHHHHH
Confidence 9999984310 111 12446778999999999888777777776544322
Q ss_pred HHHHHHHHHHhcCCCEEEEEcCcccCCCCC----Ccce--eeecCCCCccccCHHHHHHHHHHHhhCC--CCCCcEEEEe
Q 021854 213 LAEQDESMLMASGIPYTIIRTGVLQNTPGG----KQGF--QFEEGCAANGSLSKEDAAFICVEALESI--PQTGLIFEVV 284 (306)
Q Consensus 213 ~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~----~~~~--~~~~g~~~~~~Is~~DVA~~iv~aL~~~--~~~g~~~~v~ 284 (306)
+.+.....+...||+++.|+||++...... .... .+........+.+++|||++++.++.+. ...|++++|.
T Consensus 188 l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~v~~L~s~~a~~itG~~i~vd 267 (273)
T 3uf0_A 188 LTRALASEWAGRGVGVNALAPGYVVTANTAALRADDERAAEITARIPAGRWATPEDMVGPAVFLASDAASYVHGQVLAVD 267 (273)
T ss_dssp HHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTSHHHHHHHHHHSTTSSCBCGGGGHHHHHHHHSGGGTTCCSCEEEES
T ss_pred HHHHHHHHHhhcCcEEEEEEeCCCcCCchhhcccCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCchhcCCcCCEEEEC
Confidence 112222223457999999999986532210 0000 0011112234678999999999998764 3468999998
Q ss_pred cCC
Q 021854 285 NGE 287 (306)
Q Consensus 285 ~g~ 287 (306)
+|.
T Consensus 268 GG~ 270 (273)
T 3uf0_A 268 GGW 270 (273)
T ss_dssp TTG
T ss_pred cCc
Confidence 874
|
| >3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* | Back alignment and structure |
|---|
Probab=99.72 E-value=1.6e-16 Score=141.47 Aligned_cols=188 Identities=13% Similarity=0.061 Sum_probs=125.4
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhh---hcCCCceeeeccCCCHHHHHHHhc-------CccEEEE
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALR-------GVRSIIC 169 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~---~~~~~v~~v~~D~~d~~~l~~~~~-------~~d~vi~ 169 (306)
|+++||||+|+||++++++|+++|++|+++.|+.++..+ ..+.++.++.+|++|.++++++++ ++|++||
T Consensus 1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lvn 80 (248)
T 3asu_A 1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWCNIDILVN 80 (248)
T ss_dssp CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHTSCTTTCCCCEEEE
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEE
Confidence 579999999999999999999999999999999876432 234568899999999999998876 5799999
Q ss_pred cCCc-----h----------------------hh----hcccccCCCEEEEecCcccccCCCCcccccchHHHHH--HHH
Q 021854 170 PSEG-----F----------------------IS----NAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKL--AEQ 216 (306)
Q Consensus 170 ~~~g-----~----------------------~~----~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~~--~~~ 216 (306)
+++- . +. ..+.+.+.++||++||..++.+..+...|..+++... .+.
T Consensus 81 nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~ 160 (248)
T 3asu_A 81 NAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLN 160 (248)
T ss_dssp CCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHH
T ss_pred CCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEccchhccCCCCCchHHHHHHHHHHHHHH
Confidence 8431 0 01 1122456789999999988776666666655433211 111
Q ss_pred HHHHHHhcCCCEEEEEcCccc-CCCCCC----cceeeecCCCCccccCHHHHHHHHHHHhhCCC-CCCcEEEEecCC
Q 021854 217 DESMLMASGIPYTIIRTGVLQ-NTPGGK----QGFQFEEGCAANGSLSKEDAAFICVEALESIP-QTGLIFEVVNGE 287 (306)
Q Consensus 217 aE~~l~~sgi~~tiiRPg~l~-~~~~~~----~~~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~-~~g~~~~v~~g~ 287 (306)
....+...+++++.|+||++. ...... .............+++++|+|++++.++.++. ..++.+.+....
T Consensus 161 la~e~~~~gi~v~~v~PG~v~gT~~~~~~~~~~~~~~~~~~~~~~~~~p~dvA~~v~~l~s~~~~~~g~~i~v~~~~ 237 (248)
T 3asu_A 161 LRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDDGKAEKTYQNTVALTPEDVSEAVWWVSTLPAHVNINTLEMMPVT 237 (248)
T ss_dssp HHHHTTTSCCEEEEEEECSBCC----------------------CCBCHHHHHHHHHHHHHSCTTCCCCEEEECCTT
T ss_pred HHHHhhhcCcEEEEEeccccccCcchhhcccCchHHHHHHHhccCCCCHHHHHHHHHHHhcCCccceeeEEEEcccc
Confidence 111223468999999999975 332110 00000000011235799999999999998754 456777776554
|
| >3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=99.72 E-value=1.2e-16 Score=145.85 Aligned_cols=192 Identities=19% Similarity=0.208 Sum_probs=129.7
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcch--h------hhhcCCCceeeeccCCCHHHHHHHhc-----
Q 021854 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN--A------MESFGTYVESMAGDASNKKFLKTALR----- 162 (306)
Q Consensus 96 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~--~------~~~~~~~v~~v~~D~~d~~~l~~~~~----- 162 (306)
...+|++|||||+|+||++++++|+++|++|+++.|+.+. . .+..+.++.++.+|++|.++++++++
T Consensus 46 ~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 125 (294)
T 3r3s_A 46 RLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAREA 125 (294)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 3457999999999999999999999999999999887432 1 11234578899999999988877664
Q ss_pred --CccEEEEcCCc-----h----------------------hhhccccc--CCCEEEEecCcccccCCCCcccccchHHH
Q 021854 163 --GVRSIICPSEG-----F----------------------ISNAGSLK--GVQHVILLSQLSVYRGSGGIQALMKGNAR 211 (306)
Q Consensus 163 --~~d~vi~~~~g-----~----------------------~~~~a~~~--gvkr~V~iSS~~~~~~~~~~~~~~~~~a~ 211 (306)
++|++||+++. . +.+++... +-.+||++||..++.+..+...|..+++.
T Consensus 126 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa 205 (294)
T 3r3s_A 126 LGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSIQAYQPSPHLLDYAATKAA 205 (294)
T ss_dssp HTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred cCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECChhhccCCCCchHHHHHHHH
Confidence 68999998431 0 11112111 22599999999998877777677654432
Q ss_pred H--HHHHHHHHHHhcCCCEEEEEcCcccCCC----CCCcce--eeecCCCCccccCHHHHHHHHHHHhhCCC--CCCcEE
Q 021854 212 K--LAEQDESMLMASGIPYTIIRTGVLQNTP----GGKQGF--QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIF 281 (306)
Q Consensus 212 ~--~~~~aE~~l~~sgi~~tiiRPg~l~~~~----~~~~~~--~~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~~ 281 (306)
. +.+.....+...||+++.|+||++.... ...... .+........+.+++|+|+++++++.+.. -.|+++
T Consensus 206 ~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~L~s~~~~~itG~~i 285 (294)
T 3r3s_A 206 ILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPMKRAGQPAELAPVYVYLASQESSYVTAEVH 285 (294)
T ss_dssp HHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHTTTSCGGGSTTTTTTSTTSSCBCGGGGHHHHHHHHSGGGTTCCSCEE
T ss_pred HHHHHHHHHHHHhhcCeEEEEEecCcCccccccccCCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCCCCEE
Confidence 2 1122222234569999999999865321 000000 01112222446788999999999986543 468999
Q ss_pred EEecCC
Q 021854 282 EVVNGE 287 (306)
Q Consensus 282 ~v~~g~ 287 (306)
+|.+|.
T Consensus 286 ~vdGG~ 291 (294)
T 3r3s_A 286 GVCGGE 291 (294)
T ss_dssp EESTTC
T ss_pred EECCCc
Confidence 999874
|
| >1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.72 E-value=9.2e-17 Score=146.37 Aligned_cols=190 Identities=14% Similarity=0.103 Sum_probs=126.3
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh-----------cCCCceeeeccCCCHHHHHHHhc---
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-----------FGTYVESMAGDASNKKFLKTALR--- 162 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~-----------~~~~v~~v~~D~~d~~~l~~~~~--- 162 (306)
..+++|+||||+|+||++++++|+++|++|+++.|+.++..+. .+.++.++.+|++|.++++++++
T Consensus 16 l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~ 95 (303)
T 1yxm_A 16 LQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTL 95 (303)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHHHH
Confidence 3578999999999999999999999999999999998653221 24578899999999999888776
Q ss_pred ----CccEEEEcCCch--------------------------hhhcc----cccCCCEEEEecCcccccCCCCcccccch
Q 021854 163 ----GVRSIICPSEGF--------------------------ISNAG----SLKGVQHVILLSQLSVYRGSGGIQALMKG 208 (306)
Q Consensus 163 ----~~d~vi~~~~g~--------------------------~~~~a----~~~gvkr~V~iSS~~~~~~~~~~~~~~~~ 208 (306)
.+|+|||+++.. +.+++ .+.+.++||++||.. ..+......|..+
T Consensus 96 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~-~~~~~~~~~Y~~s 174 (303)
T 1yxm_A 96 DTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPT-KAGFPLAVHSGAA 174 (303)
T ss_dssp HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCC-TTCCTTCHHHHHH
T ss_pred HHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCeEEEEEeec-ccCCCcchhhHHH
Confidence 489999984410 11111 123457899999987 4444444455433
Q ss_pred HHHH--HHHHHHHHHHhcCCCEEEEEcCcccCC--CCCCcc---eee---ecCCCCccccCHHHHHHHHHHHhhCCC--C
Q 021854 209 NARK--LAEQDESMLMASGIPYTIIRTGVLQNT--PGGKQG---FQF---EEGCAANGSLSKEDAAFICVEALESIP--Q 276 (306)
Q Consensus 209 ~a~~--~~~~aE~~l~~sgi~~tiiRPg~l~~~--~~~~~~---~~~---~~g~~~~~~Is~~DVA~~iv~aL~~~~--~ 276 (306)
++.. +.+.....+...++++++||||++... ...... ... ........+.+++|+|++++.++.+.. .
T Consensus 175 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~i~~l~~~~~~~~ 254 (303)
T 1yxm_A 175 RAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAKRIGVPEEVSSVVCFLLSPAASFI 254 (303)
T ss_dssp HHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGGSTTSSCBCTHHHHHHHHHHHSGGGTTC
T ss_pred HHHHHHHHHHHHHHhcccCeEEEEEecCCcccchhhhhccccchHHHHHHHhcCcccCCCCHHHHHHHHHHHhCcccccC
Confidence 3211 111111222346899999999996533 111100 000 011112346789999999999997543 4
Q ss_pred CCcEEEEecCC
Q 021854 277 TGLIFEVVNGE 287 (306)
Q Consensus 277 ~g~~~~v~~g~ 287 (306)
.|+.+++.+|.
T Consensus 255 ~G~~~~v~gG~ 265 (303)
T 1yxm_A 255 TGQSVDVDGGR 265 (303)
T ss_dssp CSCEEEESTTG
T ss_pred CCcEEEECCCe
Confidence 68899998874
|
| >1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.72 E-value=2.9e-17 Score=147.14 Aligned_cols=190 Identities=13% Similarity=0.077 Sum_probs=129.1
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh------cCCCceeeeccCCCHHHHHHHhc-------C
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------G 163 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~~~-------~ 163 (306)
..+|+++||||+|+||++++++|+++|++|+++.|+.++..+. .+.++.++.+|++|.++++++++ +
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 84 (262)
T 1zem_A 5 FNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGK 84 (262)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence 3578999999999999999999999999999999998653321 13468889999999988877665 7
Q ss_pred ccEEEEcCCch---------------------------hh----hcccccCCCEEEEecCcccccCCCCcccccchHHHH
Q 021854 164 VRSIICPSEGF---------------------------IS----NAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK 212 (306)
Q Consensus 164 ~d~vi~~~~g~---------------------------~~----~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~ 212 (306)
+|++||+++.. +. ..+.+.+.++||++||..++.+......|..+++..
T Consensus 85 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~ 164 (262)
T 1zem_A 85 IDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSKGAI 164 (262)
T ss_dssp CCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCTTBHHHHHHHHHH
T ss_pred CCEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCCCchHHHHHHHH
Confidence 89999984310 01 112334678999999998877666666675544321
Q ss_pred --HHHHHHHHHHhcCCCEEEEEcCcccCCCCC---------------C-cce-e---eecCCCCccccCHHHHHHHHHHH
Q 021854 213 --LAEQDESMLMASGIPYTIIRTGVLQNTPGG---------------K-QGF-Q---FEEGCAANGSLSKEDAAFICVEA 270 (306)
Q Consensus 213 --~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~---------------~-~~~-~---~~~g~~~~~~Is~~DVA~~iv~a 270 (306)
+.+.....+...+++++.|+||++...... . ... . +........+.+++|||++++.+
T Consensus 165 ~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l 244 (262)
T 1zem_A 165 IALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGDINEIPGVVAFL 244 (262)
T ss_dssp HHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTSTTSSCBCGGGSHHHHHHH
T ss_pred HHHHHHHHHHHHhhCeEEEEEecCCcCcchhhhhccchhhhccccccccCHHHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence 122222334457999999999986432110 0 000 0 00111123456889999999999
Q ss_pred hhCCC--CCCcEEEEecC
Q 021854 271 LESIP--QTGLIFEVVNG 286 (306)
Q Consensus 271 L~~~~--~~g~~~~v~~g 286 (306)
+.+.. ..|+.+.+.+|
T Consensus 245 ~s~~~~~itG~~i~vdGG 262 (262)
T 1zem_A 245 LGDDSSFMTGVNLPIAGG 262 (262)
T ss_dssp HSGGGTTCCSCEEEESCC
T ss_pred cCchhcCcCCcEEecCCC
Confidence 87543 46888888764
|
| >4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=99.72 E-value=1.5e-16 Score=143.75 Aligned_cols=181 Identities=12% Similarity=0.044 Sum_probs=119.8
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhh---hcCCCceeeeccCCCHHHHHHHhc-------CccE
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALR-------GVRS 166 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~---~~~~~v~~v~~D~~d~~~l~~~~~-------~~d~ 166 (306)
..+++++||||+|+||++++++|+++|++|+++.|+.+++.+ ..+.++.++.+|++|.++++++++ .+|+
T Consensus 26 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~ 105 (272)
T 4dyv_A 26 TGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIGDDALCVPTDVTDPDSVRALFTATVEKFGRVDV 105 (272)
T ss_dssp --CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTSCCEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 357899999999999999999999999999999999876433 334678999999999998888776 7899
Q ss_pred EEEcCCc-----h----------------------hh----hcccccC--CCEEEEecCcccccCCCCcccccchHHHH-
Q 021854 167 IICPSEG-----F----------------------IS----NAGSLKG--VQHVILLSQLSVYRGSGGIQALMKGNARK- 212 (306)
Q Consensus 167 vi~~~~g-----~----------------------~~----~~a~~~g--vkr~V~iSS~~~~~~~~~~~~~~~~~a~~- 212 (306)
+|++++. . +. ..+.+.+ -.+||++||..++.+..+...|..+++..
T Consensus 106 lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~asKaa~~ 185 (272)
T 4dyv_A 106 LFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATSPRPYSAPYTATKHAIT 185 (272)
T ss_dssp EEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTTSCCTTCHHHHHHHHHHH
T ss_pred EEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhcCCCCCchHHHHHHHHHH
Confidence 9998431 0 01 1122233 46999999999888777776776544322
Q ss_pred -HHHHHHHHHHhcCCCEEEEEcCcccCCCCCC--cce-eeecCCCCccccCHHHHHHHHHHHhhCCCCC
Q 021854 213 -LAEQDESMLMASGIPYTIIRTGVLQNTPGGK--QGF-QFEEGCAANGSLSKEDAAFICVEALESIPQT 277 (306)
Q Consensus 213 -~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~--~~~-~~~~g~~~~~~Is~~DVA~~iv~aL~~~~~~ 277 (306)
+.+.....+...+|+++.|+||++....... ... ..........+.+++|+|++++.++.++...
T Consensus 186 ~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~fL~s~~~~~ 254 (272)
T 4dyv_A 186 GLTKSTSLDGRVHDIACGQIDIGNADTPMAQKMKAGVPQADLSIKVEPVMDVAHVASAVVYMASLPLDA 254 (272)
T ss_dssp HHHHHHHHHHGGGTEEEEEEEEEECC------------------------CHHHHHHHHHHHHHSCTTS
T ss_pred HHHHHHHHHhCccCEEEEEEEECcccChhhhhhcccchhhhhcccccCCCCHHHHHHHHHHHhCCCCcC
Confidence 1122222234579999999999865322110 000 0001112234679999999999999987643
|
| >3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* | Back alignment and structure |
|---|
Probab=99.72 E-value=8.3e-17 Score=146.62 Aligned_cols=192 Identities=18% Similarity=0.193 Sum_probs=131.7
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhh-------hhcCCCceeeeccCCCHHHHHHHhc------
Q 021854 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM-------ESFGTYVESMAGDASNKKFLKTALR------ 162 (306)
Q Consensus 96 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~-------~~~~~~v~~v~~D~~d~~~l~~~~~------ 162 (306)
...+|++|||||+|+||++++++|+++|++|+++.|+.+... +..+.++.++.+|++|.++++++++
T Consensus 44 ~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 123 (291)
T 3ijr_A 44 KLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQL 123 (291)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 446799999999999999999999999999999999876421 1234578899999999988887775
Q ss_pred -CccEEEEcCCch---------------------------hhhcccc--cCCCEEEEecCcccccCCCCcccccchHHHH
Q 021854 163 -GVRSIICPSEGF---------------------------ISNAGSL--KGVQHVILLSQLSVYRGSGGIQALMKGNARK 212 (306)
Q Consensus 163 -~~d~vi~~~~g~---------------------------~~~~a~~--~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~ 212 (306)
.+|++||+++.. +.+++.. .+.++||++||..++.+......|..+++..
T Consensus 124 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~ 203 (291)
T 3ijr_A 124 GSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTASIVAYEGNETLIDYSATKGAI 203 (291)
T ss_dssp SSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECCTHHHHCCTTCHHHHHHHHHH
T ss_pred CCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEechHhcCCCCCChhHHHHHHHH
Confidence 679999984310 1111111 1345999999999887776766776544322
Q ss_pred --HHHHHHHHHHhcCCCEEEEEcCcccCCCC----CCcc-eeeecCCCCccccCHHHHHHHHHHHhhCCC--CCCcEEEE
Q 021854 213 --LAEQDESMLMASGIPYTIIRTGVLQNTPG----GKQG-FQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEV 283 (306)
Q Consensus 213 --~~~~aE~~l~~sgi~~tiiRPg~l~~~~~----~~~~-~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~~~v 283 (306)
+.+.....+...+++++.|+||++..... .... ..+........+.+++|+|++++.++.+.. ..|+++++
T Consensus 204 ~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~v 283 (291)
T 3ijr_A 204 VAFTRSLSQSLVQKGIRVNGVAPGPIWTPLIPSSFDEKKVSQFGSNVPMQRPGQPYELAPAYVYLASSDSSYVTGQMIHV 283 (291)
T ss_dssp HHHHHHHHHHHGGGTCEEEEEEECSBCSTHHHHHSCHHHHHHTTTTSTTSSCBCGGGTHHHHHHHHSGGGTTCCSCEEEE
T ss_pred HHHHHHHHHHHhhcCEEEEEEeeCCCcCCcccccCCHHHHHHHHccCCCCCCcCHHHHHHHHHHHhCCccCCCcCCEEEE
Confidence 11222222334699999999998653221 0000 001122223456789999999999997543 46899999
Q ss_pred ecCC
Q 021854 284 VNGE 287 (306)
Q Consensus 284 ~~g~ 287 (306)
.+|-
T Consensus 284 dGG~ 287 (291)
T 3ijr_A 284 NGGV 287 (291)
T ss_dssp SSSC
T ss_pred CCCc
Confidence 8775
|
| >4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=99.72 E-value=1.9e-17 Score=149.44 Aligned_cols=192 Identities=16% Similarity=0.130 Sum_probs=134.6
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh------cCCCceeeeccCCCHHHHHHHhc-------
Q 021854 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR------- 162 (306)
Q Consensus 96 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~~~------- 162 (306)
...+|+++||||+|+||++++++|+++|++|+++.|+.++..+. .+.++.++.+|++|.++++++++
T Consensus 23 ~l~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 102 (271)
T 4ibo_A 23 DLGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQGI 102 (271)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHHTC
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHCC
Confidence 45679999999999999999999999999999999998763321 24578899999999999888776
Q ss_pred CccEEEEcCCch--------------------------h----hhcccccCCCEEEEecCcccccCCCCcccccchHHHH
Q 021854 163 GVRSIICPSEGF--------------------------I----SNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK 212 (306)
Q Consensus 163 ~~d~vi~~~~g~--------------------------~----~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~ 212 (306)
++|++||+++-. + ...+.+.+..+||++||..+..+..+...|..+++..
T Consensus 103 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~asKaa~ 182 (271)
T 4ibo_A 103 DVDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRGYGKIVNIGSLTSELARATVAPYTVAKGGI 182 (271)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBCTTCHHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCCCCCCchhHHHHHHHH
Confidence 689999984410 1 1123345668999999998887776666776544321
Q ss_pred --HHHHHHHHHHhcCCCEEEEEcCcccCCCCCC----cce--eeecCCCCccccCHHHHHHHHHHHhhCCC--CCCcEEE
Q 021854 213 --LAEQDESMLMASGIPYTIIRTGVLQNTPGGK----QGF--QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFE 282 (306)
Q Consensus 213 --~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~----~~~--~~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~~~ 282 (306)
+.+.....+...+|+++.|+||++....... ... .+........+.+++|+|++++.++.+.. ..|++++
T Consensus 183 ~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~v~~L~s~~~~~itG~~i~ 262 (271)
T 4ibo_A 183 KMLTRAMAAEWAQYGIQANAIGPGYMLTDMNQALIDNPEFDAWVKARTPAKRWGKPQELVGTAVFLSASASDYVNGQIIY 262 (271)
T ss_dssp HHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHHCHHHHHHHHHHSTTCSCBCGGGGHHHHHHHHSGGGTTCCSCEEE
T ss_pred HHHHHHHHHHHhhhCeEEEEEEeccEeCcchhhcccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCCCcEEE
Confidence 1122222234579999999999865332110 000 01111222346789999999999887543 4689999
Q ss_pred EecCC
Q 021854 283 VVNGE 287 (306)
Q Consensus 283 v~~g~ 287 (306)
|.+|.
T Consensus 263 vdGG~ 267 (271)
T 4ibo_A 263 VDGGM 267 (271)
T ss_dssp ESTTG
T ss_pred ECCCe
Confidence 99875
|
| >4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A* | Back alignment and structure |
|---|
Probab=99.72 E-value=1.4e-16 Score=142.82 Aligned_cols=193 Identities=16% Similarity=0.118 Sum_probs=130.8
Q ss_pred CccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEe-cCcchhhh------hcCCCceeeeccCCCHHHHHHHhc-----
Q 021854 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALV-KDKRNAME------SFGTYVESMAGDASNKKFLKTALR----- 162 (306)
Q Consensus 95 ~~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~-R~~~~~~~------~~~~~v~~v~~D~~d~~~l~~~~~----- 162 (306)
...++++|+||||+|+||++++++|+++|++|+++. |+.++..+ ..+.++.++.+|++|.++++++++
T Consensus 22 ~~l~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 101 (267)
T 4iiu_A 22 SNAMSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHEIAQ 101 (267)
T ss_dssp ---CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence 345679999999999999999999999999997765 44443221 124578999999999998888775
Q ss_pred --CccEEEEcCCch--------------------------hhhcc-----cccCCCEEEEecCcccccCCCCcccccchH
Q 021854 163 --GVRSIICPSEGF--------------------------ISNAG-----SLKGVQHVILLSQLSVYRGSGGIQALMKGN 209 (306)
Q Consensus 163 --~~d~vi~~~~g~--------------------------~~~~a-----~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~ 209 (306)
.+|++||+++.. +.+++ ++.+..+||++||..++.+..+...|..++
T Consensus 102 ~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK 181 (267)
T 4iiu_A 102 HGAWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSSVSGVMGNRGQVNYSAAK 181 (267)
T ss_dssp HCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCHHHHHCCTTCHHHHHHH
T ss_pred hCCccEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcchHhccCCCCCchhHHHH
Confidence 789999984310 11111 245678999999998887776777776544
Q ss_pred HHH--HHHHHHHHHHhcCCCEEEEEcCcccCCCCCCccee---eecCCCCccccCHHHHHHHHHHHhhCCC--CCCcEEE
Q 021854 210 ARK--LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQ---FEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFE 282 (306)
Q Consensus 210 a~~--~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~~~~~---~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~~~ 282 (306)
+.. +.+.....+...+++++.|+||++........... .........+.+++|+|++++.++.+.. ..|++++
T Consensus 182 aa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~p~~~~~~~edva~~~~~L~s~~~~~itG~~i~ 261 (267)
T 4iiu_A 182 AGIIGATKALAIELAKRKITVNCIAPGLIDTGMIEMEESALKEAMSMIPMKRMGQAEEVAGLASYLMSDIAGYVTRQVIS 261 (267)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCCCHHHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred HHHHHHHHHHHHHHhhcCeEEEEEEEeeecCCcccccHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCCcccCccCCEEE
Confidence 322 11222222445689999999999754332111100 0111222446789999999999997543 5689999
Q ss_pred EecCC
Q 021854 283 VVNGE 287 (306)
Q Consensus 283 v~~g~ 287 (306)
+.+|-
T Consensus 262 vdGG~ 266 (267)
T 4iiu_A 262 INGGM 266 (267)
T ss_dssp ESTTC
T ss_pred eCCCc
Confidence 98763
|
| >3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.72 E-value=1.8e-16 Score=142.93 Aligned_cols=185 Identities=11% Similarity=0.083 Sum_probs=124.3
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhh-------------hhcCCCceeeeccCCCHHHHHHHhc-
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM-------------ESFGTYVESMAGDASNKKFLKTALR- 162 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~-------------~~~~~~v~~v~~D~~d~~~l~~~~~- 162 (306)
..+|+++||||+++||++++++|+++|++|+++.|+.++.. ...+.++.++.+|++|.++++++++
T Consensus 4 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~ 83 (274)
T 3e03_A 4 LSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAVAA 83 (274)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHHHH
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHH
Confidence 45799999999999999999999999999999999875411 1124578899999999988877765
Q ss_pred ------CccEEEEcCCch------------------------------hhhcccccCCCEEEEecCcccccC--CCCccc
Q 021854 163 ------GVRSIICPSEGF------------------------------ISNAGSLKGVQHVILLSQLSVYRG--SGGIQA 204 (306)
Q Consensus 163 ------~~d~vi~~~~g~------------------------------~~~~a~~~gvkr~V~iSS~~~~~~--~~~~~~ 204 (306)
.+|++||+++.. ....+++.+..+||++||..++.+ ..+...
T Consensus 84 ~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~~ 163 (274)
T 3e03_A 84 TVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPAWWGAHTG 163 (274)
T ss_dssp HHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSSCEEEECCCCCCCCHHHHHHCHH
T ss_pred HHHHcCCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCCceEEEECChHhcCCCCCCCCch
Confidence 679999984410 111234456789999999887654 233445
Q ss_pred ccchHHHH--HHHHHHHHHHhcCCCEEEEEcCcccCCCCCCcceeeecCCCCccccCHHHHHHHHHHHhhCCC--CCCcE
Q 021854 205 LMKGNARK--LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLI 280 (306)
Q Consensus 205 ~~~~~a~~--~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~~~~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~ 280 (306)
|..+++.. +.+.....+...+|+++.|+||++.+.+.... . .........+++|+|++++.++.... ..|+.
T Consensus 164 Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~v~T~~~~~---~-~~~~~~~~~~pedvA~~v~~l~s~~~~~itG~~ 239 (274)
T 3e03_A 164 YTLAKMGMSLVTLGLAAEFGPQGVAINALWPRTVIATDAINM---L-PGVDAAACRRPEIMADAAHAVLTREAAGFHGQF 239 (274)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTCEEEEEECSBCBCC-----------CCCGGGSBCTHHHHHHHHHHHTSCCTTCCSCE
T ss_pred HHHHHHHHHHHHHHHHHHhhhcCEEEEEEECCcccccchhhh---c-ccccccccCCHHHHHHHHHHHhCccccccCCeE
Confidence 54443321 11222223445799999999996443332110 1 11122346789999999999997654 35777
Q ss_pred EEEecC
Q 021854 281 FEVVNG 286 (306)
Q Consensus 281 ~~v~~g 286 (306)
+ +.+|
T Consensus 240 i-~~~g 244 (274)
T 3e03_A 240 L-IDDE 244 (274)
T ss_dssp E-EHHH
T ss_pred E-EcCc
Confidence 7 4433
|
| >4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1} | Back alignment and structure |
|---|
Probab=99.72 E-value=2.1e-16 Score=140.48 Aligned_cols=189 Identities=15% Similarity=0.112 Sum_probs=134.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhc---CccEEEEcCCch
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR---GVRSIICPSEGF 174 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~---~~d~vi~~~~g~ 174 (306)
.+|+++||||+++||+++++.|+++|++|++..|+.+++.+....++..+.+|++|+++++++++ .+|++|++++-.
T Consensus 10 ~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~g~iDiLVNNAGi~ 89 (242)
T 4b79_A 10 AGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHAPRHPRIRREELDITDSQRLQRLFEALPRLDVLVNNAGIS 89 (242)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTSCCCTTEEEEECCTTCHHHHHHHHHHCSCCSEEEECCCCC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhhhhcCCeEEEEecCCCHHHHHHHHHhcCCCCEEEECCCCC
Confidence 58999999999999999999999999999999999988766566688999999999998887765 569999984411
Q ss_pred ----------------------------hhhcccccCCCEEEEecCcccccCCCCcccccchHHH--HHHHHHHHHHHhc
Q 021854 175 ----------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--KLAEQDESMLMAS 224 (306)
Q Consensus 175 ----------------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~--~~~~~aE~~l~~s 224 (306)
....+++.+ .+||++||..+..+......|..+++. .+.+.....+...
T Consensus 90 ~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~-G~IVnisS~~~~~~~~~~~~Y~asKaav~~ltr~lA~Ela~~ 168 (242)
T 4b79_A 90 RDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRG-GSILNIASMYSTFGSADRPAYSASKGAIVQLTRSLACEYAAE 168 (242)
T ss_dssp CGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHC-EEEEEECCGGGTSCCSSCHHHHHHHHHHHHHHHHHHHHHGGG
T ss_pred CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CeEEEEeeccccCCCCCCHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 111223333 799999999988877777777665432 1223333345568
Q ss_pred CCCEEEEEcCcccCCCCCC---cce---eeecCCCCccccCHHHHHHHHHHHhhCCC--CCCcEEEEecCC
Q 021854 225 GIPYTIIRTGVLQNTPGGK---QGF---QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVNGE 287 (306)
Q Consensus 225 gi~~tiiRPg~l~~~~~~~---~~~---~~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~~~v~~g~ 287 (306)
||++..|.||++....... ... .+.......-+-.++|||.++++++.+.. -.|+++.|.+|-
T Consensus 169 gIrVNaV~PG~i~T~m~~~~~~~~~~~~~~~~~~PlgR~g~peeiA~~v~fLaSd~a~~iTG~~l~VDGG~ 239 (242)
T 4b79_A 169 RIRVNAIAPGWIDTPLGAGLKADVEATRRIMQRTPLARWGEAPEVASAAAFLCGPGASFVTGAVLAVDGGY 239 (242)
T ss_dssp TEEEEEEEECSBCCC-----CCCHHHHHHHHHTCTTCSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred CeEEEEEEeCCCCChhhhcccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCccCceEEECccH
Confidence 9999999999865322110 000 00011112235578999999999986543 468999998763
|
| >3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.72 E-value=2.8e-16 Score=141.69 Aligned_cols=191 Identities=15% Similarity=0.118 Sum_probs=127.5
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCc------------chhh------hhcCCCceeeeccCCCHHHH
Q 021854 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK------------RNAM------ESFGTYVESMAGDASNKKFL 157 (306)
Q Consensus 96 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~------------~~~~------~~~~~~v~~v~~D~~d~~~l 157 (306)
...+|++|||||+|+||++++++|+++|++|+++.|+. +... ...+.++.++.+|++|.+++
T Consensus 10 ~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v 89 (278)
T 3sx2_A 10 PLTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRESL 89 (278)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHHH
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHHH
Confidence 34579999999999999999999999999999999872 2211 12345789999999999998
Q ss_pred HHHhc-------CccEEEEcCCch----------------------hhh----cccccC-CCEEEEecCcccccCC----
Q 021854 158 KTALR-------GVRSIICPSEGF----------------------ISN----AGSLKG-VQHVILLSQLSVYRGS---- 199 (306)
Q Consensus 158 ~~~~~-------~~d~vi~~~~g~----------------------~~~----~a~~~g-vkr~V~iSS~~~~~~~---- 199 (306)
+++++ .+|++||+++-. +.+ .+.+.+ ..+||++||..++.+.
T Consensus 90 ~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~ 169 (278)
T 3sx2_A 90 SAALQAGLDELGRLDIVVANAGIAPMSAGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVGSAD 169 (278)
T ss_dssp HHHHHHHHHHHCCCCEEEECCCCCCCSSTHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCCCSS
T ss_pred HHHHHHHHHHcCCCCEEEECCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHHhcCCCccCC
Confidence 88776 789999984411 111 122233 5799999999877654
Q ss_pred CCcccccchHHHH--HHHHHHHHHHhcCCCEEEEEcCcccCCCCCCcc---------------eeeecCCCCccccCHHH
Q 021854 200 GGIQALMKGNARK--LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQG---------------FQFEEGCAANGSLSKED 262 (306)
Q Consensus 200 ~~~~~~~~~~a~~--~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~~~---------------~~~~~g~~~~~~Is~~D 262 (306)
.+...|..+++.. +.+.....+...+|+++.|+||++......... ..+..... ..+.+++|
T Consensus 170 ~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~p~d 248 (278)
T 3sx2_A 170 PGSVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMINNEFTREWLAKMAAATDTPGAMGNAMP-VEVLAPED 248 (278)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHHHHHHHCC--CTTSCSSS-CSSBCHHH
T ss_pred CCchHhHHHHHHHHHHHHHHHHHHhccCcEEEEEecCCccCccchhhhHHHHHhhccchhhhhhhhhhhcC-cCcCCHHH
Confidence 2333454433211 112122223356899999999986543221100 00111111 45678999
Q ss_pred HHHHHHHHhhCCC--CCCcEEEEecCC
Q 021854 263 AAFICVEALESIP--QTGLIFEVVNGE 287 (306)
Q Consensus 263 VA~~iv~aL~~~~--~~g~~~~v~~g~ 287 (306)
||+++++++.+.. ..|++++|.+|-
T Consensus 249 vA~~v~~l~s~~~~~itG~~i~vdGG~ 275 (278)
T 3sx2_A 249 VANAVAWLVSDQARYITGVTLPVDAGF 275 (278)
T ss_dssp HHHHHHHHTSGGGTTCCSCEEEESTTT
T ss_pred HHHHHHHHhCcccccccCCEEeECCCc
Confidence 9999999986543 568999998774
|
| >3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=99.71 E-value=1e-16 Score=145.55 Aligned_cols=187 Identities=14% Similarity=0.085 Sum_probs=126.8
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhh-------------hhcCCCceeeeccCCCHHHHHHHhc-
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM-------------ESFGTYVESMAGDASNKKFLKTALR- 162 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~-------------~~~~~~v~~v~~D~~d~~~l~~~~~- 162 (306)
..+++++||||+++||++++++|+++|++|+++.|+.++.. ...+.++.++.+|++|.++++++++
T Consensus 7 l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~ 86 (285)
T 3sc4_A 7 LRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAAVAK 86 (285)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHH
Confidence 45799999999999999999999999999999999986311 1124578899999999998887775
Q ss_pred ------CccEEEEcCCch------------------------------hhhcccccCCCEEEEecCcccccCC-CCcccc
Q 021854 163 ------GVRSIICPSEGF------------------------------ISNAGSLKGVQHVILLSQLSVYRGS-GGIQAL 205 (306)
Q Consensus 163 ------~~d~vi~~~~g~------------------------------~~~~a~~~gvkr~V~iSS~~~~~~~-~~~~~~ 205 (306)
.+|++||+++.. ....+++.+..+||++||..+..+. .+...|
T Consensus 87 ~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~Y 166 (285)
T 3sc4_A 87 TVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEPKWLRPTPY 166 (285)
T ss_dssp HHHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSCEEEECCCCCCCSGGGSCSHHH
T ss_pred HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhccCCCCCCchH
Confidence 789999984410 1122344567899999998876654 444556
Q ss_pred cchHHHH--HHHHHHHHHHhcCCCEEEEEcCcccCCCCCCcceeeecCCCCccccCHHHHHHHHHHHhhCCC-CCCcEEE
Q 021854 206 MKGNARK--LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIP-QTGLIFE 282 (306)
Q Consensus 206 ~~~~a~~--~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~~~~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~-~~g~~~~ 282 (306)
..+++.. +.+.....+...||+++.|+||++.+.+.... . .........+.+++|+|++++.++.++. ..|+.+.
T Consensus 167 ~asKaal~~~~~~la~e~~~~gI~vn~v~PG~~v~t~~~~~-~-~~~~~~~~r~~~pedvA~~~~~l~s~~~~~tG~~i~ 244 (285)
T 3sc4_A 167 MMAKYGMTLCALGIAEELRDAGIASNTLWPRTTVATAAVQN-L-LGGDEAMARSRKPEVYADAAYVVLNKPSSYTGNTLL 244 (285)
T ss_dssp HHHHHHHHHHHHHHHHHTGGGTCEEEEEECSSCBCCHHHHH-H-HTSCCCCTTCBCTHHHHHHHHHHHTSCTTCCSCEEE
T ss_pred HHHHHHHHHHHHHHHHHhcccCcEEEEEeCCCccccHHHHh-h-ccccccccCCCCHHHHHHHHHHHhCCcccccceEEE
Confidence 5443321 11112222334799999999996443321100 0 0011112346789999999999998765 4567776
Q ss_pred Eec
Q 021854 283 VVN 285 (306)
Q Consensus 283 v~~ 285 (306)
+.+
T Consensus 245 ~dg 247 (285)
T 3sc4_A 245 CED 247 (285)
T ss_dssp HHH
T ss_pred EcC
Confidence 654
|
| >3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.71 E-value=9.8e-17 Score=141.63 Aligned_cols=173 Identities=13% Similarity=0.127 Sum_probs=118.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhh---hcCCCceeeeccCCCHHHHHHHhc-------CccEE
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALR-------GVRSI 167 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~---~~~~~v~~v~~D~~d~~~l~~~~~-------~~d~v 167 (306)
++++++||||+|+||++++++|+++|++|+++.|+.++..+ ..+.++.++.+|++|.++++++++ .+|++
T Consensus 2 s~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~l 81 (235)
T 3l6e_A 2 SLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLGNAVIGIVADLAHHEDVDVAFAAAVEWGGLPELV 81 (235)
T ss_dssp -CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTSHHHHHHHHHHHHHHHCSCSEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcCCCcEE
Confidence 36899999999999999999999999999999999876432 223468899999999988887765 57999
Q ss_pred EEcCCch--------------------------hhh----cccccCCCEEEEecCcccccCCCCcccccchHHHHH--HH
Q 021854 168 ICPSEGF--------------------------ISN----AGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKL--AE 215 (306)
Q Consensus 168 i~~~~g~--------------------------~~~----~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~~--~~ 215 (306)
||+++.. +.+ .+++.+ .++|++||..+..+......|..+++... .+
T Consensus 82 vnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~ 160 (235)
T 3l6e_A 82 LHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERG-GVLANVLSSAAQVGKANESLYCASKWGMRGFLE 160 (235)
T ss_dssp EEECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC-EEEEEECCEECCSSCSSHHHHHHHHHHHHHHHH
T ss_pred EECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEEeCHHhcCCCCCCcHHHHHHHHHHHHHH
Confidence 9984410 011 122233 39999999988877766667765443221 11
Q ss_pred HHHHHHHhcCCCEEEEEcCcccCCCCCCcceeeecCCCCccccCHHHHHHHHHHHhhCCCC
Q 021854 216 QDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQ 276 (306)
Q Consensus 216 ~aE~~l~~sgi~~tiiRPg~l~~~~~~~~~~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~~ 276 (306)
.....+...+++++.|+||++.......... .....+.+++|+|+.++.++.++..
T Consensus 161 ~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~-----~~~~~~~~pedvA~~v~~l~~~~~~ 216 (235)
T 3l6e_A 161 SLRAELKDSPLRLVNLYPSGIRSEFWDNTDH-----VDPSGFMTPEDAAAYMLDALEARSS 216 (235)
T ss_dssp HHHHHTTTSSEEEEEEEEEEECCCC----------------CBCHHHHHHHHHHHTCCCSS
T ss_pred HHHHHhhccCCEEEEEeCCCccCcchhccCC-----CCCcCCCCHHHHHHHHHHHHhCCCC
Confidence 1112233468999999999865332211100 1123578999999999999986543
|
| >3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} | Back alignment and structure |
|---|
Probab=99.71 E-value=2.3e-16 Score=142.64 Aligned_cols=192 Identities=13% Similarity=0.104 Sum_probs=130.2
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh------cCCCceeeeccCCCHHHHHHHhc-------
Q 021854 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR------- 162 (306)
Q Consensus 96 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~~~------- 162 (306)
...+|+++||||+|+||++++++|+++|++|+++.|+.++..+. .+.++.++.+|++|.++++++++
T Consensus 29 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g 108 (276)
T 3r1i_A 29 DLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGELG 108 (276)
T ss_dssp CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 34679999999999999999999999999999999998764321 23578899999999999888776
Q ss_pred CccEEEEcCCch--------------------------hh----hcccccC-CCEEEEecCcccccCC--CCcccccchH
Q 021854 163 GVRSIICPSEGF--------------------------IS----NAGSLKG-VQHVILLSQLSVYRGS--GGIQALMKGN 209 (306)
Q Consensus 163 ~~d~vi~~~~g~--------------------------~~----~~a~~~g-vkr~V~iSS~~~~~~~--~~~~~~~~~~ 209 (306)
++|++||+++-. +. ..+.+.+ -.+||++||..++... .+...|..++
T Consensus 109 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~~~~~~~~~~Y~asK 188 (276)
T 3r1i_A 109 GIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIINIPQQVSHYCTSK 188 (276)
T ss_dssp CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCCSSCCHHHHHHH
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhcccCCCCCcchHHHHH
Confidence 789999984311 01 1122333 3789999998876543 2344565443
Q ss_pred HHH--HHHHHHHHHHhcCCCEEEEEcCcccCCCCCCcce---eeecCCCCccccCHHHHHHHHHHHhhCCC--CCCcEEE
Q 021854 210 ARK--LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGF---QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFE 282 (306)
Q Consensus 210 a~~--~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~~~~---~~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~~~ 282 (306)
+.. +.+.....+...+|+++.|+||++.......... .+........+.+++|+|++++.++.+.. -.|+++.
T Consensus 189 aa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~fL~s~~~~~itG~~i~ 268 (276)
T 3r1i_A 189 AAVVHLTKAMAVELAPHQIRVNSVSPGYIRTELVEPLADYHALWEPKIPLGRMGRPEELTGLYLYLASAASSYMTGSDIV 268 (276)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTTGGGGGGHHHHGGGSTTSSCBCGGGSHHHHHHHHSGGGTTCCSCEEE
T ss_pred HHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCccccchHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCccCcEEE
Confidence 321 1122222233479999999999865433211100 01111122346788999999999997543 4689999
Q ss_pred EecCC
Q 021854 283 VVNGE 287 (306)
Q Consensus 283 v~~g~ 287 (306)
|.+|.
T Consensus 269 vdGG~ 273 (276)
T 3r1i_A 269 IDGGY 273 (276)
T ss_dssp ESTTT
T ss_pred ECcCc
Confidence 98875
|
| >3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.71 E-value=1.8e-16 Score=142.70 Aligned_cols=178 Identities=11% Similarity=0.095 Sum_probs=118.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh------cCCCceeeeccCCCHHHHHHHhc-------Cc
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GV 164 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~~~-------~~ 164 (306)
++|+++||||+|+||++++++|+++|++|+++.|+.++..+. .+..+.++.+|++|.++++++++ .+
T Consensus 3 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 82 (264)
T 3tfo_A 3 MDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWGRI 82 (264)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 578999999999999999999999999999999998763321 24567889999999988887765 68
Q ss_pred cEEEEcCCch------------------------------hhhcccccCCCEEEEecCcccccCCCCcccccchHHHHHH
Q 021854 165 RSIICPSEGF------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLA 214 (306)
Q Consensus 165 d~vi~~~~g~------------------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~~~ 214 (306)
|++||+++.. +...+++.+.++||++||..++.+......|..+++....
T Consensus 83 D~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~~~~Y~asKaal~~ 162 (264)
T 3tfo_A 83 DVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSGQIINIGSIGALSVVPTAAVYCATKFAVRA 162 (264)
T ss_dssp CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHHHHHHHHH
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEEcCHHHcccCCCChhHHHHHHHHHH
Confidence 9999984410 1112334567899999999988877676677654432111
Q ss_pred HHHHHHHHh-cCCCEEEEEcCcccCCCCCC--cceeee-cCCCCccccCHHHHHHHHHHHhhCCCC
Q 021854 215 EQDESMLMA-SGIPYTIIRTGVLQNTPGGK--QGFQFE-EGCAANGSLSKEDAAFICVEALESIPQ 276 (306)
Q Consensus 215 ~~aE~~l~~-sgi~~tiiRPg~l~~~~~~~--~~~~~~-~g~~~~~~Is~~DVA~~iv~aL~~~~~ 276 (306)
.++.+-.+ .+|+++.|+||++....... ...... .......+.+++|||++++.++.++..
T Consensus 163 -l~~~la~e~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~~l~s~~~~ 227 (264)
T 3tfo_A 163 -ISDGLRQESTNIRVTCVNPGVVESELAGTITHEETMAAMDTYRAIALQPADIARAVRQVIEAPQS 227 (264)
T ss_dssp -HHHHHHHHCSSEEEEEEEECCC-----------------------CCCHHHHHHHHHHHHHSCTT
T ss_pred -HHHHHHHhCCCCEEEEEecCCCcCcccccccchhHHHHHHhhhccCCCHHHHHHHHHHHhcCCcc
Confidence 11111111 38999999999865322110 000000 000112257899999999999988764
|
| >3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=99.71 E-value=1.7e-16 Score=139.10 Aligned_cols=172 Identities=12% Similarity=0.083 Sum_probs=115.9
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhh---hcCCCceeeeccCCCHHHHHHHhcCc----cEEEEcC
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALRGV----RSIICPS 171 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~---~~~~~v~~v~~D~~d~~~l~~~~~~~----d~vi~~~ 171 (306)
+|+|+||||+|+||++++++|+++|++|+++.|+.++..+ ..+.++.++.+|++|.++++++++.+ |++||++
T Consensus 1 Mk~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~d~lv~~A 80 (230)
T 3guy_A 1 MSLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLSNNVGYRARDLASHQEVEQLFEQLDSIPSTVVHSA 80 (230)
T ss_dssp --CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTCSSCCCEEECCTTCHHHHHHHHHSCSSCCSEEEECC
T ss_pred CCEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhccCeEeecCCCHHHHHHHHHHHhhcCCEEEEeC
Confidence 3689999999999999999999999999999999877443 23457889999999999999998765 8999984
Q ss_pred Cch--------------------------hh----hcccccCCCEEEEecCcccccCCCCcccccchHHHHH--HHHHHH
Q 021854 172 EGF--------------------------IS----NAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKL--AEQDES 219 (306)
Q Consensus 172 ~g~--------------------------~~----~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~~--~~~aE~ 219 (306)
+.. +. ....+.+. +||++||..++.+......|..+++... .+....
T Consensus 81 g~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~-~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~ 159 (230)
T 3guy_A 81 GSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQPV-NVVMIMSTAAQQPKAQESTYCAVKWAVKGLIESVRL 159 (230)
T ss_dssp CCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCC-EEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHH
T ss_pred CcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-eEEEEeecccCCCCCCCchhHHHHHHHHHHHHHHHH
Confidence 310 01 11222333 9999999998877766667755433221 111112
Q ss_pred HHHhcCCCEEEEEcCcccCCCCCCcceeeecCCCCccccCHHHHHHHHHHHhhCCC
Q 021854 220 MLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIP 275 (306)
Q Consensus 220 ~l~~sgi~~tiiRPg~l~~~~~~~~~~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~ 275 (306)
.+...+++++.|+||++......... .......+.+++|+|++++.++.++.
T Consensus 160 e~~~~gi~v~~v~PG~v~t~~~~~~~----~~~~~~~~~~~~dvA~~i~~l~~~~~ 211 (230)
T 3guy_A 160 ELKGKPMKIIAVYPGGMATEFWETSG----KSLDTSSFMSAEDAALMIHGALANIG 211 (230)
T ss_dssp HTTTSSCEEEEEEECCC--------------------CCCHHHHHHHHHHHCCEET
T ss_pred HHHhcCeEEEEEECCcccChHHHhcC----CCCCcccCCCHHHHHHHHHHHHhCcC
Confidence 22346899999999986543221111 11123457899999999999997654
|
| >2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.71 E-value=1e-16 Score=143.98 Aligned_cols=189 Identities=15% Similarity=0.170 Sum_probs=127.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh---cCCCceeeeccCCCHHHHHHHhc-------CccEE
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALR-------GVRSI 167 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~---~~~~v~~v~~D~~d~~~l~~~~~-------~~d~v 167 (306)
.+|+++||||+|+||++++++|+++|++|+++.|+.++..+. ...++.++.+|++|.++++++++ .+|++
T Consensus 5 ~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~l 84 (263)
T 2a4k_A 5 SGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLHGV 84 (263)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHHcCCCcEE
Confidence 468999999999999999999999999999999998764332 23468889999999998887765 46999
Q ss_pred EEcCCch--------------------------hhhcccc--cCCCEEEEecCcccccCCCCcccccchHHH--HHHHHH
Q 021854 168 ICPSEGF--------------------------ISNAGSL--KGVQHVILLSQLSVYRGSGGIQALMKGNAR--KLAEQD 217 (306)
Q Consensus 168 i~~~~g~--------------------------~~~~a~~--~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~--~~~~~a 217 (306)
||+++-. +.+++.. ...++||++||..++ +......|..+++. .+.+..
T Consensus 85 vnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~-~~~~~~~Y~asK~a~~~~~~~l 163 (263)
T 2a4k_A 85 AHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGL-GAFGLAHYAAGKLGVVGLARTL 163 (263)
T ss_dssp EEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTC-CHHHHHHHHHCSSHHHHHHHHH
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEecchhc-CCCCcHHHHHHHHHHHHHHHHH
Confidence 9983310 1111111 115799999999887 44444455443321 122222
Q ss_pred HHHHHhcCCCEEEEEcCcccCCCCCCc-cee---eecCCCCccccCHHHHHHHHHHHhhCCC--CCCcEEEEecCC
Q 021854 218 ESMLMASGIPYTIIRTGVLQNTPGGKQ-GFQ---FEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVNGE 287 (306)
Q Consensus 218 E~~l~~sgi~~tiiRPg~l~~~~~~~~-~~~---~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~~~v~~g~ 287 (306)
...+...++++++|+||++........ ... +........+.+++|+|++++.++.++. ..|+.+.+.+|.
T Consensus 164 a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdgG~ 239 (263)
T 2a4k_A 164 ALELARKGVRVNVLLPGLIQTPMTAGLPPWAWEQEVGASPLGRAGRPEEVAQAALFLLSEESAYITGQALYVDGGR 239 (263)
T ss_dssp HHHHTTTTCEEEEEEECSBCCGGGTTSCHHHHHHHHHTSTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred HHHhhhhCcEEEEEEeCcCcCchhhhcCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCcCCEEEECCCc
Confidence 233445799999999998653321110 000 0011122346799999999999997543 468899998875
|
| >3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.71 E-value=1e-15 Score=138.08 Aligned_cols=191 Identities=17% Similarity=0.150 Sum_probs=126.7
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcch-hh------hhcCCCceeeeccCCCHHHHHHHhc-------
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-AM------ESFGTYVESMAGDASNKKFLKTALR------- 162 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~-~~------~~~~~~v~~v~~D~~d~~~l~~~~~------- 162 (306)
..+|+++||||+|+||++++++|+++|++|+++.|+... .. ...+.++.++.+|++|.++++++++
T Consensus 29 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 108 (271)
T 3v2g_A 29 LAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEALG 108 (271)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 457999999999999999999999999999998776532 21 1124578899999999998888776
Q ss_pred CccEEEEcCCch--------------------------hhhcccc--cCCCEEEEecCcccccC-CCCcccccchHHHH-
Q 021854 163 GVRSIICPSEGF--------------------------ISNAGSL--KGVQHVILLSQLSVYRG-SGGIQALMKGNARK- 212 (306)
Q Consensus 163 ~~d~vi~~~~g~--------------------------~~~~a~~--~gvkr~V~iSS~~~~~~-~~~~~~~~~~~a~~- 212 (306)
.+|++||+++.. +.+++.. .+..+||++||..+... ..+...|..+++..
T Consensus 109 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS~~~~~~~~~~~~~Y~asKaa~~ 188 (271)
T 3v2g_A 109 GLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGSNLAELVPWPGISLYSASKAALA 188 (271)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCGGGTCCCSTTCHHHHHHHHHHH
T ss_pred CCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeChhhccCCCCCchHHHHHHHHHH
Confidence 789999984410 1111111 23579999998766543 44555665543321
Q ss_pred -HHHHHHHHHHhcCCCEEEEEcCcccCCCCCCcce---eeecCCCCccccCHHHHHHHHHHHhhCC--CCCCcEEEEecC
Q 021854 213 -LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGF---QFEEGCAANGSLSKEDAAFICVEALESI--PQTGLIFEVVNG 286 (306)
Q Consensus 213 -~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~~~~---~~~~g~~~~~~Is~~DVA~~iv~aL~~~--~~~g~~~~v~~g 286 (306)
+.+.....+...+|+++.|+||++.......... ..........+.+++|+|++++.++... .-.|+++.|.+|
T Consensus 189 ~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~fL~s~~~~~itG~~i~vdGG 268 (271)
T 3v2g_A 189 GLTKGLARDLGPRGITVNIVHPGSTDTDMNPADGDHAEAQRERIATGSYGEPQDIAGLVAWLAGPQGKFVTGASLTIDGG 268 (271)
T ss_dssp HHHHHHHHHHGGGTCEEEEEEECSBCSSSSCSSCSSHHHHHHTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred HHHHHHHHHhhhhCeEEEEEecCCCcCCcccccchhHHHHHhcCCCCCCCCHHHHHHHHHHHhCcccCCccCCEEEeCcC
Confidence 1122222234569999999999865332211100 0111122234678999999999998643 356899999876
Q ss_pred C
Q 021854 287 E 287 (306)
Q Consensus 287 ~ 287 (306)
-
T Consensus 269 ~ 269 (271)
T 3v2g_A 269 A 269 (271)
T ss_dssp T
T ss_pred c
Confidence 4
|
| >1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.71 E-value=9.3e-17 Score=144.56 Aligned_cols=173 Identities=12% Similarity=0.120 Sum_probs=119.4
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh------cCCCceeeeccCCCHHHHHHHhc-------C
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------G 163 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~~~-------~ 163 (306)
..+++|+||||+|+||++++++|+++|++|+++.|+.++..+. .+.++.++.+|++|.++++++++ +
T Consensus 29 l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 108 (272)
T 1yb1_A 29 VTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGD 108 (272)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCC
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHHCCC
Confidence 3579999999999999999999999999999999988653321 24578899999999998887765 6
Q ss_pred ccEEEEcCCch------------------------------hhhcccccCCCEEEEecCcccccCCCCcccccchHHHH-
Q 021854 164 VRSIICPSEGF------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK- 212 (306)
Q Consensus 164 ~d~vi~~~~g~------------------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~- 212 (306)
+|+|||+++-. +...+.+.+.++||++||..++.+..+...|..+++..
T Consensus 109 iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~ 188 (272)
T 1yb1_A 109 VSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYCSSKFAAV 188 (272)
T ss_dssp CSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCHHHHHHHHHHHHHHH
T ss_pred CcEEEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCCCCchhHHHHHHHHH
Confidence 89999984310 11123346788999999998876554445554433321
Q ss_pred -HHHHHHHHHH---hcCCCEEEEEcCcccCCCCCCcceeeecCCCCccccCHHHHHHHHHHHhhCCC
Q 021854 213 -LAEQDESMLM---ASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIP 275 (306)
Q Consensus 213 -~~~~aE~~l~---~sgi~~tiiRPg~l~~~~~~~~~~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~ 275 (306)
+.+.....+. ..++++++||||++........ . .....+++++|+|++++.++.++.
T Consensus 189 ~l~~~la~e~~~~~~~gi~v~~v~Pg~v~t~~~~~~-~-----~~~~~~~~~~dva~~i~~~~~~~~ 249 (272)
T 1yb1_A 189 GFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKNP-S-----TSLGPTLEPEEVVNRLMHGILTEQ 249 (272)
T ss_dssp HHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTCT-H-----HHHCCCCCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHhCCCCeEEEEEeCCcccCCccccc-c-----ccccCCCCHHHHHHHHHHHHHcCC
Confidence 1111111122 3489999999998643321111 0 011347899999999999998654
|
| >3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=99.71 E-value=3.6e-16 Score=139.88 Aligned_cols=195 Identities=13% Similarity=0.136 Sum_probs=123.6
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecC-cchhhh------hcCCCceeeeccCCCHHHHHHHhc-------
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKD-KRNAME------SFGTYVESMAGDASNKKFLKTALR------- 162 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~-~~~~~~------~~~~~v~~v~~D~~d~~~l~~~~~------- 162 (306)
..+|+++||||+|+||++++++|+++|++|+++.|. .+...+ ..+.++.++.+|++|.++++++++
T Consensus 6 l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 85 (259)
T 3edm_A 6 FTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADKFG 85 (259)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence 457999999999999999999999999999998554 433211 124578899999999998888775
Q ss_pred CccEEEEcCCch---------------------------hhhccccc--CCCEEEEecCcccc-cCCCCcccccchHHHH
Q 021854 163 GVRSIICPSEGF---------------------------ISNAGSLK--GVQHVILLSQLSVY-RGSGGIQALMKGNARK 212 (306)
Q Consensus 163 ~~d~vi~~~~g~---------------------------~~~~a~~~--gvkr~V~iSS~~~~-~~~~~~~~~~~~~a~~ 212 (306)
.+|++||+++.. +.+++... .-.+||++||..++ .+..+...|..+++..
T Consensus 86 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~asKaa~ 165 (259)
T 3edm_A 86 EIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFSSQAGRDGGGPGALAYATSKGAV 165 (259)
T ss_dssp SEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHCCSTTCHHHHHHHHHH
T ss_pred CCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEcCHHhccCCCCCcHHHHHHHHHH
Confidence 679999984311 11111111 13489999999887 5555566665543322
Q ss_pred HH--HHHHHHHHhcCCCEEEEEcCcccCCCCCCc--c---eeeecCCCCccccCHHHHHHHHHHHhhCCC--CCCcEEEE
Q 021854 213 LA--EQDESMLMASGIPYTIIRTGVLQNTPGGKQ--G---FQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEV 283 (306)
Q Consensus 213 ~~--~~aE~~l~~sgi~~tiiRPg~l~~~~~~~~--~---~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~~~v 283 (306)
.. +.....+. ..+++..|+||++........ . ..+........+.+++|+|++++.++.+.. -.|+.+++
T Consensus 166 ~~l~~~la~e~~-~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~v~~L~s~~~~~itG~~i~v 244 (259)
T 3edm_A 166 MTFTRGLAKEVG-PKIRVNAVCPGMISTTFHDTFTKPEVRERVAGATSLKREGSSEDVAGLVAFLASDDAAYVTGACYDI 244 (259)
T ss_dssp HHHHHHHHHHHT-TTCEEEEEEECCBCC----------------------CCBCHHHHHHHHHHHHSGGGTTCCSCEEEE
T ss_pred HHHHHHHHHHHC-CCCEEEEEEECCCcCcccccccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCccCCEEEE
Confidence 11 11111122 249999999998653221100 0 001111122346789999999999987543 46899999
Q ss_pred ecCCcCHHH
Q 021854 284 VNGEEKVSD 292 (306)
Q Consensus 284 ~~g~~s~~d 292 (306)
.+|...+.+
T Consensus 245 dGg~~~~~~ 253 (259)
T 3edm_A 245 NGGVLFSEG 253 (259)
T ss_dssp SBCSSBC--
T ss_pred CCCcCCCCC
Confidence 998765433
|
| >1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=7.6e-17 Score=143.41 Aligned_cols=190 Identities=13% Similarity=0.105 Sum_probs=124.8
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCe-EEEEecCcch--hhh---hc-CCCceeeeccCCCH-HHHHHHhc------
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTR-IKALVKDKRN--AME---SF-GTYVESMAGDASNK-KFLKTALR------ 162 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~-V~~l~R~~~~--~~~---~~-~~~v~~v~~D~~d~-~~l~~~~~------ 162 (306)
..+++++||||+|+||++++++|+++|++ |+++.|+.+. ..+ .. +.++.++.+|++|. ++++++++
T Consensus 3 l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 82 (254)
T 1sby_A 3 LTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQL 82 (254)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchHHHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHHHhc
Confidence 35789999999999999999999999996 9999998742 211 12 23688899999997 77776665
Q ss_pred -CccEEEEcCCch------------------hhhc----ccccC---CCEEEEecCcccccCCCCcccccchHHHH--HH
Q 021854 163 -GVRSIICPSEGF------------------ISNA----GSLKG---VQHVILLSQLSVYRGSGGIQALMKGNARK--LA 214 (306)
Q Consensus 163 -~~d~vi~~~~g~------------------~~~~----a~~~g---vkr~V~iSS~~~~~~~~~~~~~~~~~a~~--~~ 214 (306)
++|++||+++-. +.++ ..+.+ ..+||++||..++.+......|..+++.. +.
T Consensus 83 g~id~lv~~Ag~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~ 162 (254)
T 1sby_A 83 KTVDILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPVYSASKAAVVSFT 162 (254)
T ss_dssp SCCCEEEECCCCCCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTSHHHHHHHHHHHHHH
T ss_pred CCCCEEEECCccCCHHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhccCCCCchHHHHHHHHHHHHH
Confidence 789999985411 1111 22222 46899999998887766666675543321 11
Q ss_pred HHHHHHHHhcCCCEEEEEcCcccCCCCCC-cce-----eeecCCCCccccCHHHHHHHHHHHhhCCCCCCcEEEEecCC
Q 021854 215 EQDESMLMASGIPYTIIRTGVLQNTPGGK-QGF-----QFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVVNGE 287 (306)
Q Consensus 215 ~~aE~~l~~sgi~~tiiRPg~l~~~~~~~-~~~-----~~~~g~~~~~~Is~~DVA~~iv~aL~~~~~~g~~~~v~~g~ 287 (306)
+.....+...++++++|+||++....... ... .+..........+++|+|++++.++.. ...|++|++.+|.
T Consensus 163 ~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~i~~~~~~-~~~G~~~~v~gG~ 240 (254)
T 1sby_A 163 NSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLLSHPTQTSEQCGQNFVKAIEA-NKNGAIWKLDLGT 240 (254)
T ss_dssp HHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHHHTTSCCEEHHHHHHHHHHHHHH-CCTTCEEEEETTE
T ss_pred HHHHHHhccCCeEEEEEecCCccCccccccchhhhhhHHHHHHHhcCCCCCHHHHHHHHHHHHHc-CCCCCEEEEeCCc
Confidence 11112233479999999999854221100 000 000000112345899999999999873 4568899999874
|
| >3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} | Back alignment and structure |
|---|
Probab=99.70 E-value=5e-17 Score=146.27 Aligned_cols=187 Identities=14% Similarity=0.083 Sum_probs=128.9
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhc-------CccEEE
Q 021854 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR-------GVRSII 168 (306)
Q Consensus 96 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~-------~~d~vi 168 (306)
...+|+++||||+|+||++++++|+++|++|+++.|+.+.... ...+.+|++|.++++.+++ .+|++|
T Consensus 25 ~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~-----~~~~~~Dv~~~~~~~~~~~~~~~~~g~iD~lv 99 (266)
T 3uxy_A 25 GFEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIAA-----DLHLPGDLREAAYADGLPGAVAAGLGRLDIVV 99 (266)
T ss_dssp -CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSCC-----SEECCCCTTSHHHHHHHHHHHHHHHSCCCEEE
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHh-----hhccCcCCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence 3457999999999999999999999999999999998765432 2445899999887776654 789999
Q ss_pred EcCCch--------------------------hhhc----ccccCCCEEEEecCcccccCCCCcccccchHHHH--HHHH
Q 021854 169 CPSEGF--------------------------ISNA----GSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK--LAEQ 216 (306)
Q Consensus 169 ~~~~g~--------------------------~~~~----a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~--~~~~ 216 (306)
|+++.. +.++ +++.+.++||++||..++.+..+...|..+++.. +.+.
T Consensus 100 nnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~ 179 (266)
T 3uxy_A 100 NNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAGGGAIVNVASCWGLRPGPGHALYCLTKAALASLTQC 179 (266)
T ss_dssp ECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTBCCTTBHHHHHHHHHHHHHHHH
T ss_pred ECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCCCCChHHHHHHHHHHHHHHH
Confidence 984410 1111 2456778999999999887777776776544322 1122
Q ss_pred HHHHHHhcCCCEEEEEcCcccCCCC------CCcc-----eeeecCCCCccccCHHHHHHHHHHHhhCCC--CCCcEEEE
Q 021854 217 DESMLMASGIPYTIIRTGVLQNTPG------GKQG-----FQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEV 283 (306)
Q Consensus 217 aE~~l~~sgi~~tiiRPg~l~~~~~------~~~~-----~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~~~v 283 (306)
....+...+|+++.|+||++..... .... ..+........+.+++|+|++++.++.+.. ..|+++++
T Consensus 180 la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~v 259 (266)
T 3uxy_A 180 MGMDHAPQGIRINAVCPNEVNTPMLRTGFAKRGFDPDRAVAELGRTVPLGRIAEPEDIADVVLFLASDAARYLCGSLVEV 259 (266)
T ss_dssp HHHHHGGGTEEEEEEEESSBCCHHHHHHHHHTTCCHHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEE
T ss_pred HHHHhhhcCcEEEEEeeCCCcchHhhhhhhcccccchHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCCcCCEEEE
Confidence 2222334689999999998643210 0000 011122223456789999999999997653 45899999
Q ss_pred ecCC
Q 021854 284 VNGE 287 (306)
Q Consensus 284 ~~g~ 287 (306)
.+|.
T Consensus 260 dGG~ 263 (266)
T 3uxy_A 260 NGGK 263 (266)
T ss_dssp STTC
T ss_pred CcCE
Confidence 8875
|
| >3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=1.5e-16 Score=142.68 Aligned_cols=191 Identities=12% Similarity=0.071 Sum_probs=131.0
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh-------cCC-CceeeeccCCCHHHHHHHhc------
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------FGT-YVESMAGDASNKKFLKTALR------ 162 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~-------~~~-~v~~v~~D~~d~~~l~~~~~------ 162 (306)
..+++++||||+++||++++++|+++|++|+++.|+.++..+. .+. ++.++.+|++|.++++++++
T Consensus 6 l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 85 (265)
T 3lf2_A 6 LSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACERTL 85 (265)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHHHc
Confidence 4579999999999999999999999999999999998763321 232 48899999999988877664
Q ss_pred -CccEEEEcCCch--------------------------h----hhcccccCCCEEEEecCcccccCCCCcccccchHHH
Q 021854 163 -GVRSIICPSEGF--------------------------I----SNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR 211 (306)
Q Consensus 163 -~~d~vi~~~~g~--------------------------~----~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~ 211 (306)
.+|++||+++.. + ...+.+.+..+||++||..++.+......|..+++.
T Consensus 86 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa 165 (265)
T 3lf2_A 86 GCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLASQPEPHMVATSAARAG 165 (265)
T ss_dssp CSCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEEGGGTSCCTTBHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEECCcccCCCCCCchhhHHHHHH
Confidence 679999984410 1 111234566799999999988777777777654432
Q ss_pred H--HHHHHHHHHHhcCCCEEEEEcCcccCCCC-------CCccee---e----e--cCCCCccccCHHHHHHHHHHHhhC
Q 021854 212 K--LAEQDESMLMASGIPYTIIRTGVLQNTPG-------GKQGFQ---F----E--EGCAANGSLSKEDAAFICVEALES 273 (306)
Q Consensus 212 ~--~~~~aE~~l~~sgi~~tiiRPg~l~~~~~-------~~~~~~---~----~--~g~~~~~~Is~~DVA~~iv~aL~~ 273 (306)
. +.+.....+...||++..|+||++..... ...... + . .......+.+++|+|++++.++.+
T Consensus 166 ~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~fL~s~ 245 (265)
T 3lf2_A 166 VKNLVRSMAFEFAPKGVRVNGILIGLVESGQWRRRFEAREERELDWAQWTAQLARNKQIPLGRLGKPIEAARAILFLASP 245 (265)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTC------CHHHHHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSG
T ss_pred HHHHHHHHHHHhcccCeEEEEEEeCcCcCchhhhhhhhhhhhccCHHHHHHHHhhccCCCcCCCcCHHHHHHHHHHHhCc
Confidence 1 11222223345699999999998642210 000000 0 0 001223467899999999999875
Q ss_pred CC--CCCcEEEEecCC
Q 021854 274 IP--QTGLIFEVVNGE 287 (306)
Q Consensus 274 ~~--~~g~~~~v~~g~ 287 (306)
.. -.|+++.+.+|-
T Consensus 246 ~~~~itG~~i~vdGG~ 261 (265)
T 3lf2_A 246 LSAYTTGSHIDVSGGL 261 (265)
T ss_dssp GGTTCCSEEEEESSSC
T ss_pred hhcCcCCCEEEECCCC
Confidence 33 468999998775
|
| >3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.70 E-value=1e-15 Score=141.66 Aligned_cols=201 Identities=15% Similarity=0.114 Sum_probs=126.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcc-----hhh------hhcCCCceeeeccCCCHHHHHHHhc----
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR-----NAM------ESFGTYVESMAGDASNKKFLKTALR---- 162 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~-----~~~------~~~~~~v~~v~~D~~d~~~l~~~~~---- 162 (306)
.+++++||||+|+||++++++|+++|++|++.+|+.. +.. ...+.++.++.+|++|.++++++++
T Consensus 4 ~~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~ 83 (324)
T 3u9l_A 4 SKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQIIG 83 (324)
T ss_dssp -CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Confidence 4689999999999999999999999999999998742 111 1124578999999999999888876
Q ss_pred ---CccEEEEcCCch--------------------------hhhc----ccccCCCEEEEecCcccccC-CCCcccccch
Q 021854 163 ---GVRSIICPSEGF--------------------------ISNA----GSLKGVQHVILLSQLSVYRG-SGGIQALMKG 208 (306)
Q Consensus 163 ---~~d~vi~~~~g~--------------------------~~~~----a~~~gvkr~V~iSS~~~~~~-~~~~~~~~~~ 208 (306)
++|++||+++-. +.++ +++.+.++||++||..+... ......|..+
T Consensus 84 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~~g~iV~isS~~~~~~~~~~~~~Y~as 163 (324)
T 3u9l_A 84 EDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQKHGLLIWISSSSSAGGTPPYLAPYFAA 163 (324)
T ss_dssp HHSCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCCSSCHHHHHH
T ss_pred HcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEecchhccCCCCcchhHHHH
Confidence 789999984410 1112 25567889999999987743 3444556554
Q ss_pred HHHHH--HHHHHHHHHhcCCCEEEEEcCcccCCCC----CCccee------eec-CC-------------CCccccCHHH
Q 021854 209 NARKL--AEQDESMLMASGIPYTIIRTGVLQNTPG----GKQGFQ------FEE-GC-------------AANGSLSKED 262 (306)
Q Consensus 209 ~a~~~--~~~aE~~l~~sgi~~tiiRPg~l~~~~~----~~~~~~------~~~-g~-------------~~~~~Is~~D 262 (306)
++... .+.....+...||++++|+||++..... ...... +.. +. ......+++|
T Consensus 164 Kaa~~~~~~~la~el~~~gI~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~p~~ 243 (324)
T 3u9l_A 164 KAAMDAIAVQYARELSRWGIETSIIVPGAFTSGTNHFAHSGVPDDHARQAEYEAGPNAGLGEEIKKAFAAIVPPDADVSL 243 (324)
T ss_dssp HHHHHHHHHHHHHHHHTTTEEEEEEEECCC---------CBCCSCHHHHHHHHHTTTTTHHHHHHHHHHHTSCTTCCTHH
T ss_pred HHHHHHHHHHHHHHhhhhCcEEEEEECCccccCchhhcccCCchHHHHHHhhccccccCCHHHHHHHHHHhcCCCCCHHH
Confidence 33211 1112222344799999999998742111 000000 000 00 0011257899
Q ss_pred HHHHHHHHhhCCCCC-CcEEEEecCCcCHHHHHHHHH
Q 021854 263 AAFICVEALESIPQT-GLIFEVVNGEEKVSDWKKCFS 298 (306)
Q Consensus 263 VA~~iv~aL~~~~~~-g~~~~v~~g~~s~~d~~~l~~ 298 (306)
||++++.++..+... ...+.+.........+.+++.
T Consensus 244 vA~aiv~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~ 280 (324)
T 3u9l_A 244 VADAIVRVVGTASGKRPFRVHVDPAEDGADVGFSVLD 280 (324)
T ss_dssp HHHHHHHHHTSCTTCCCSEEEECTTCCSHHHHHHHHH
T ss_pred HHHHHHHHhcCCCCCCCeEEEeCCcchHHHHHHHHHH
Confidence 999999999887532 344555433334444443333
|
| >3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.70 E-value=4e-16 Score=140.78 Aligned_cols=191 Identities=13% Similarity=0.022 Sum_probs=129.4
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecC-------------cchhhh------hcCCCceeeeccCCCHHHH
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKD-------------KRNAME------SFGTYVESMAGDASNKKFL 157 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~-------------~~~~~~------~~~~~v~~v~~D~~d~~~l 157 (306)
..+|+++||||+++||++++++|+++|++|+++.|+ .+...+ ..+..+.++.+|++|.+++
T Consensus 9 l~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v 88 (277)
T 3tsc_A 9 LEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFDRL 88 (277)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHH
T ss_pred cCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHH
Confidence 457999999999999999999999999999999883 222211 1245788999999999888
Q ss_pred HHHhc-------CccEEEEcCCch--------------------------hhh----cccccC-CCEEEEecCcccccCC
Q 021854 158 KTALR-------GVRSIICPSEGF--------------------------ISN----AGSLKG-VQHVILLSQLSVYRGS 199 (306)
Q Consensus 158 ~~~~~-------~~d~vi~~~~g~--------------------------~~~----~a~~~g-vkr~V~iSS~~~~~~~ 199 (306)
+++++ .+|++||+++-. +.. .+.+.+ -.+||++||..++.+.
T Consensus 89 ~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~ 168 (277)
T 3tsc_A 89 RKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMKMQ 168 (277)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC
T ss_pred HHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEccHhhCCCC
Confidence 87765 579999984310 111 122333 5699999999988777
Q ss_pred CCcccccchHHHH--HHHHHHHHHHhcCCCEEEEEcCcccCCCCCC------------cceee--ecCCCCccccCHHHH
Q 021854 200 GGIQALMKGNARK--LAEQDESMLMASGIPYTIIRTGVLQNTPGGK------------QGFQF--EEGCAANGSLSKEDA 263 (306)
Q Consensus 200 ~~~~~~~~~~a~~--~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~------------~~~~~--~~g~~~~~~Is~~DV 263 (306)
.....|..+++.. +.+.....+...+|+++.|+||++....... ..... ........+.+++|+
T Consensus 169 ~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~r~~~pedv 248 (277)
T 3tsc_A 169 PFMIHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPMGSGDMVTAVGQAMETNPQLSHVLTPFLPDWVAEPEDI 248 (277)
T ss_dssp SSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSGGGSHHHHHHHHHHHHTCGGGTTTTCCSSSCSCBCHHHH
T ss_pred CCchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeCCCcCCcccchhhhhhhhcccccHHHHHHhhhccCCCCCCHHHH
Confidence 7776776544322 1122222234578999999999865332110 00000 001111246789999
Q ss_pred HHHHHHHhhCCC--CCCcEEEEecCC
Q 021854 264 AFICVEALESIP--QTGLIFEVVNGE 287 (306)
Q Consensus 264 A~~iv~aL~~~~--~~g~~~~v~~g~ 287 (306)
|+++++++.+.. -.|+++.|.+|.
T Consensus 249 A~~v~~L~s~~~~~itG~~i~vdGG~ 274 (277)
T 3tsc_A 249 ADTVCWLASDESRKVTAAQIPVDQGS 274 (277)
T ss_dssp HHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred HHHHHHHhCccccCCcCCEEeeCCCc
Confidence 999999997543 468999999875
|
| >1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.70 E-value=3.4e-16 Score=139.85 Aligned_cols=183 Identities=13% Similarity=0.114 Sum_probs=123.4
Q ss_pred CccCCCeEEEEcCCChHHHHHHHHHHHCC---CeEEEEecCcchhhhh-----cCCCceeeeccCCCHHHHHHHhc----
Q 021854 95 PEEARDAVLVTDGDSDIGQMVILSLIVKR---TRIKALVKDKRNAMES-----FGTYVESMAGDASNKKFLKTALR---- 162 (306)
Q Consensus 95 ~~~~~~~ilVtGatG~iG~~l~~~L~~~g---~~V~~l~R~~~~~~~~-----~~~~v~~v~~D~~d~~~l~~~~~---- 162 (306)
...++++|+||||+|+||++++++|+++| ++|+++.|+.++.... ...++.++.+|++|.++++++++
T Consensus 17 ~~~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~ 96 (267)
T 1sny_A 17 RGSHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEG 96 (267)
T ss_dssp ---CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHH
T ss_pred cCCCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHHHHhhccCCceEEEEecCCChHHHHHHHHHHHH
Confidence 34567899999999999999999999999 9999999998653211 13478999999999988888776
Q ss_pred -----CccEEEEcCCc-----h----------------------hhhc----cccc------C-----CCEEEEecCccc
Q 021854 163 -----GVRSIICPSEG-----F----------------------ISNA----GSLK------G-----VQHVILLSQLSV 195 (306)
Q Consensus 163 -----~~d~vi~~~~g-----~----------------------~~~~----a~~~------g-----vkr~V~iSS~~~ 195 (306)
.+|++||+++. . +.++ +.+. + .++||++||..+
T Consensus 97 ~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~ 176 (267)
T 1sny_A 97 VTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILG 176 (267)
T ss_dssp HHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGG
T ss_pred hcCCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEEEEecccc
Confidence 79999998431 0 0111 1111 2 579999999888
Q ss_pred ccCCC---CcccccchHHHHH--HHHHHHHHHhcCCCEEEEEcCcccCCCCCCcceeeecCCCCccccCHHHHHHHHHHH
Q 021854 196 YRGSG---GIQALMKGNARKL--AEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEA 270 (306)
Q Consensus 196 ~~~~~---~~~~~~~~~a~~~--~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~~~~~~~~g~~~~~~Is~~DVA~~iv~a 270 (306)
+.+.. +...|..+++... .+.....+...++++++||||++....... ..+++++|+|+.++.+
T Consensus 177 ~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-----------~~~~~~~~~a~~~~~~ 245 (267)
T 1sny_A 177 SIQGNTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGS-----------SAPLDVPTSTGQIVQT 245 (267)
T ss_dssp CSTTCCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCT-----------TCSBCHHHHHHHHHHH
T ss_pred cccCCCCCCchHHHHHHHHHHHHHHHHHHHhhcCCcEEEEeCCcceecCCCCC-----------CCCCCHHHHHHHHHHH
Confidence 76532 3344544332211 111112233469999999999875433211 2468999999999999
Q ss_pred hhCCC--CCCcEEEEecCCc
Q 021854 271 LESIP--QTGLIFEVVNGEE 288 (306)
Q Consensus 271 L~~~~--~~g~~~~v~~g~~ 288 (306)
+.... ..|..+.+.++..
T Consensus 246 ~~~~~~~~~G~~~~~~g~~~ 265 (267)
T 1sny_A 246 ISKLGEKQNGGFVNYDGTPL 265 (267)
T ss_dssp HHHCCGGGTTCEECTTSCBC
T ss_pred HHhcCcCCCCcEEccCCcCc
Confidence 98643 3566666554443
|
| >3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.70 E-value=9.5e-17 Score=148.20 Aligned_cols=207 Identities=14% Similarity=0.100 Sum_probs=136.1
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecC----------cchhhh------hcCCCceeeeccCCCHHHHHHH
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKD----------KRNAME------SFGTYVESMAGDASNKKFLKTA 160 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~----------~~~~~~------~~~~~v~~v~~D~~d~~~l~~~ 160 (306)
..+++++||||+|+||++++++|+++|++|+++.|+ .+...+ ..+..+.++.+|++|.++++++
T Consensus 25 l~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~ 104 (322)
T 3qlj_A 25 VDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAAGL 104 (322)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHHHH
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHH
Confidence 457999999999999999999999999999999987 332211 1235688899999999988877
Q ss_pred hc-------CccEEEEcCCch--------------------------hhhcc----ccc---C---CCEEEEecCccccc
Q 021854 161 LR-------GVRSIICPSEGF--------------------------ISNAG----SLK---G---VQHVILLSQLSVYR 197 (306)
Q Consensus 161 ~~-------~~d~vi~~~~g~--------------------------~~~~a----~~~---g---vkr~V~iSS~~~~~ 197 (306)
++ .+|++||+++.. +.+++ .+. + -.+||++||..++.
T Consensus 105 ~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~ 184 (322)
T 3qlj_A 105 IQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGLQ 184 (322)
T ss_dssp HHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEECCHHHHH
T ss_pred HHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEEEcCHHHcc
Confidence 75 789999984410 11111 111 1 15999999998887
Q ss_pred CCCCcccccchHHHH--HHHHHHHHHHhcCCCEEEEEcCcccCCCCCCcceeeecCCCCccccCHHHHHHHHHHHhhCCC
Q 021854 198 GSGGIQALMKGNARK--LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIP 275 (306)
Q Consensus 198 ~~~~~~~~~~~~a~~--~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~~~~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~ 275 (306)
+..+...|..+++.. +.+.....+...+|+++.|+||...+..................+++++|||.+++.++....
T Consensus 185 ~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~t~~~~~~~~~~~~~~~~~~~~~~pedva~~v~~L~s~~~ 264 (322)
T 3qlj_A 185 GSVGQGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPSARTRMTETVFAEMMATQDQDFDAMAPENVSPLVVWLGSAEA 264 (322)
T ss_dssp CBTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECTTSCCSCCSCCC--------CCTTCGGGTHHHHHHHTSGGG
T ss_pred CCCCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEecCCCCCccchhhhhhhhhccccccCCCCHHHHHHHHHHHhCccc
Confidence 766666776544322 112222223347999999999932221111111111111222345789999999999986543
Q ss_pred --CCCcEEEEecCCc------------------CHHHHHHHHHHHhhh
Q 021854 276 --QTGLIFEVVNGEE------------------KVSDWKKCFSRLMEK 303 (306)
Q Consensus 276 --~~g~~~~v~~g~~------------------s~~d~~~l~~~l~~~ 303 (306)
..|+++++.+|.. ++.++.+++.++.++
T Consensus 265 ~~itG~~i~vdGG~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~~~ 312 (322)
T 3qlj_A 265 RDVTGKVFEVEGGKIRVAEGWAHGPQIDKGARWDPAELGPVVADLLGK 312 (322)
T ss_dssp GGCCSCEEEEETTEEEEEECCEEEEEEECSSCCCGGGHHHHHHHHHHH
T ss_pred cCCCCCEEEECCCccccCCCcccccccCccCCCCHHHHHHHHHHHhhc
Confidence 3689999988752 457888888777654
|
| >3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} | Back alignment and structure |
|---|
Probab=99.70 E-value=1.6e-16 Score=143.17 Aligned_cols=190 Identities=11% Similarity=0.025 Sum_probs=127.0
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhh------hcCCCceeeeccCCCHHHHHHHhcC-------
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTALRG------- 163 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~------~~~~~v~~v~~D~~d~~~l~~~~~~------- 163 (306)
..+++|+||||+|+||++++++|+++|++|+++.|+.++... ..+.++.++.+|++|.++++++++.
T Consensus 32 l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~ 111 (279)
T 3ctm_A 32 LKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVEETISQQEKDFGT 111 (279)
T ss_dssp CTTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCHHHHHHHHHHHHHHhCC
Confidence 457899999999999999999999999999999998765321 1245788999999999988887754
Q ss_pred ccEEEEcCC-----ch---------------------------hhhcccccCCCEEEEecCcccccC--CCCcccccchH
Q 021854 164 VRSIICPSE-----GF---------------------------ISNAGSLKGVQHVILLSQLSVYRG--SGGIQALMKGN 209 (306)
Q Consensus 164 ~d~vi~~~~-----g~---------------------------~~~~a~~~gvkr~V~iSS~~~~~~--~~~~~~~~~~~ 209 (306)
+|+|||+++ +. +.+.+.+.+.++||++||..++.+ ..+...|..++
T Consensus 112 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~Y~~sK 191 (279)
T 3ctm_A 112 IDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNGKGSLIITSSISGKIVNIPQLQAPYNTAK 191 (279)
T ss_dssp CSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCCTTSCC---CCHHHHHHHH
T ss_pred CCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEECchHhccCCCCCCcccHHHHH
Confidence 899999832 10 112234467899999999987765 44444554432
Q ss_pred HHHHH--HHHHHHHHhcCCCEEEEEcCcccCCCCCCcc--e--eeecCCCCccccCHHHHHHHHHHHhhCCC--CCCcEE
Q 021854 210 ARKLA--EQDESMLMASGIPYTIIRTGVLQNTPGGKQG--F--QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIF 281 (306)
Q Consensus 210 a~~~~--~~aE~~l~~sgi~~tiiRPg~l~~~~~~~~~--~--~~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~~ 281 (306)
+.... +.....+...+ ++++|+||++......... . .+........+++++|+|++++.++.++. ..|+++
T Consensus 192 ~a~~~~~~~la~e~~~~~-~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~~~~tG~~i 270 (279)
T 3ctm_A 192 AACTHLAKSLAIEWAPFA-RVNTISPGYIDTDITDFASKDMKAKWWQLTPLGREGLTQELVGGYLYLASNASTFTTGSDV 270 (279)
T ss_dssp HHHHHHHHHHHHHTTTTC-EEEEEEECSBSSTTTSSCCHHHHHHHHHHSTTCSCBCGGGTHHHHHHHHSGGGTTCCSCEE
T ss_pred HHHHHHHHHHHHHhcccC-CEEEEeccCCccccccccChHHHHHHHHhCCccCCcCHHHHHHHHHHHhCccccCccCCEE
Confidence 21111 11111112256 8999999986543321100 0 00011112347899999999999997642 468899
Q ss_pred EEecCC
Q 021854 282 EVVNGE 287 (306)
Q Consensus 282 ~v~~g~ 287 (306)
++.+|.
T Consensus 271 ~vdgG~ 276 (279)
T 3ctm_A 271 VIDGGY 276 (279)
T ss_dssp EESTTC
T ss_pred EECCCe
Confidence 998774
|
| >3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=5.2e-16 Score=140.57 Aligned_cols=191 Identities=13% Similarity=0.019 Sum_probs=130.0
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCc----------------chhhh------hcCCCceeeeccCCCH
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK----------------RNAME------SFGTYVESMAGDASNK 154 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~----------------~~~~~------~~~~~v~~v~~D~~d~ 154 (306)
..+|+++||||+++||++++++|+++|++|+++.|+. +++.+ ..+.++.++.+|++|.
T Consensus 9 l~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~ 88 (286)
T 3uve_A 9 VEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVRDY 88 (286)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCH
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCCCH
Confidence 4579999999999999999999999999999998872 22111 1245788999999999
Q ss_pred HHHHHHhc-------CccEEEEcCCc------h---------------------hhh----cccccC-CCEEEEecCccc
Q 021854 155 KFLKTALR-------GVRSIICPSEG------F---------------------ISN----AGSLKG-VQHVILLSQLSV 195 (306)
Q Consensus 155 ~~l~~~~~-------~~d~vi~~~~g------~---------------------~~~----~a~~~g-vkr~V~iSS~~~ 195 (306)
++++++++ .+|++||+++- . +.+ .+.+.+ ..+||++||..+
T Consensus 89 ~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~ 168 (286)
T 3uve_A 89 DALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVGG 168 (286)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGG
T ss_pred HHHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCcEEEEECchhh
Confidence 98887775 68999998431 1 011 122223 569999999998
Q ss_pred ccCCCCcccccchHHHH--HHHHHHHHHHhcCCCEEEEEcCcccCCCCCCc------------cee-----e--ecCCCC
Q 021854 196 YRGSGGIQALMKGNARK--LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQ------------GFQ-----F--EEGCAA 254 (306)
Q Consensus 196 ~~~~~~~~~~~~~~a~~--~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~~------------~~~-----~--~~g~~~ 254 (306)
+.+......|..+++.. +.+.....+...+|+++.|+||++........ ... . ......
T Consensus 169 ~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 248 (286)
T 3uve_A 169 LKAYPHTGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGTFKMFRPDLENPGPDDMAPICQMFHTLP 248 (286)
T ss_dssp TSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHHHTTCSSS
T ss_pred ccCCCCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCCcccccchhhhccccccccchhhHHHHHHhhhccC
Confidence 87777777776544322 11222223445789999999998653322110 000 0 001111
Q ss_pred ccccCHHHHHHHHHHHhhCCC--CCCcEEEEecCC
Q 021854 255 NGSLSKEDAAFICVEALESIP--QTGLIFEVVNGE 287 (306)
Q Consensus 255 ~~~Is~~DVA~~iv~aL~~~~--~~g~~~~v~~g~ 287 (306)
..+.+++|||+++++++.+.. -.|++++|.+|.
T Consensus 249 ~r~~~p~dvA~~v~fL~s~~a~~itG~~i~vdGG~ 283 (286)
T 3uve_A 249 IPWVEPIDISNAVLFFASDEARYITGVTLPIDAGS 283 (286)
T ss_dssp CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred CCcCCHHHHHHHHHHHcCccccCCcCCEEeECCcc
Confidence 456789999999999997543 468999998774
|
| >2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.70 E-value=1.1e-16 Score=144.49 Aligned_cols=186 Identities=13% Similarity=0.083 Sum_probs=123.5
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh---cC--CCceeeeccCCCHHHHHHHhcCc-------cEE
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FG--TYVESMAGDASNKKFLKTALRGV-------RSI 167 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~---~~--~~v~~v~~D~~d~~~l~~~~~~~-------d~v 167 (306)
|+++||||+|+||++++++|+++|++|+++.|+.++..+. .. .++.++.+|++|.++++++++.+ |++
T Consensus 22 k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l 101 (272)
T 2nwq_A 22 STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAKTRVLPLTLDVRDRAAMSAAVDNLPEEFATLRGL 101 (272)
T ss_dssp CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHTCCGGGSSCCEE
T ss_pred cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 8999999999999999999999999999999998764322 22 36888999999999999888654 999
Q ss_pred EEcCCc-----h--------------------------hhhcccccCCC-EEEEecCcccccCCCCcccccchHHHHHHH
Q 021854 168 ICPSEG-----F--------------------------ISNAGSLKGVQ-HVILLSQLSVYRGSGGIQALMKGNARKLAE 215 (306)
Q Consensus 168 i~~~~g-----~--------------------------~~~~a~~~gvk-r~V~iSS~~~~~~~~~~~~~~~~~a~~~~~ 215 (306)
||+++. . +...+.+.+.+ +||++||..++.+..+...|..+++.. .
T Consensus 102 vnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~~IV~isS~~~~~~~~~~~~Y~asKaa~--~ 179 (272)
T 2nwq_A 102 INNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKWPYPGSHVYGGTKAFV--E 179 (272)
T ss_dssp EECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGTSCCTTCHHHHHHHHHH--H
T ss_pred EECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeCCchhccCCCCCchHHHHHHHH--H
Confidence 998431 0 11123345667 999999998877665555665433211 1
Q ss_pred HHHHHH----HhcCCCEEEEEcCcccCCCCCC----cceeeecCCCCccccCHHHHHHHHHHHhhCCC-CCCcEEEEecC
Q 021854 216 QDESML----MASGIPYTIIRTGVLQNTPGGK----QGFQFEEGCAANGSLSKEDAAFICVEALESIP-QTGLIFEVVNG 286 (306)
Q Consensus 216 ~aE~~l----~~sgi~~tiiRPg~l~~~~~~~----~~~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~-~~g~~~~v~~g 286 (306)
..-+.+ ...+|+++.|+||++....... .............+++++|+|++++.++.++. ..++.+.+.++
T Consensus 180 ~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~~l~s~~~~~~g~~i~v~~~ 259 (272)
T 2nwq_A 180 QFSLNLRCDLQGTGVRVTNLEPGLCESEFSLVRFGGDQARYDKTYAGAHPIQPEDIAETIFWIMNQPAHLNINSLEIMPV 259 (272)
T ss_dssp HHHHHHHTTCTTSCCEEEEEEECSBC--------------------CCCCBCHHHHHHHHHHHHTSCTTEEEEEEEEEET
T ss_pred HHHHHHHHHhCccCeEEEEEEcCCCcCcchhcccccchHHHHHhhccCCCCCHHHHHHHHHHHhCCCccCccceEEEeec
Confidence 111112 2358999999999865332110 00000000011235799999999999998654 34566777765
Q ss_pred C
Q 021854 287 E 287 (306)
Q Consensus 287 ~ 287 (306)
.
T Consensus 260 ~ 260 (272)
T 2nwq_A 260 S 260 (272)
T ss_dssp T
T ss_pred c
Confidence 4
|
| >3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.70 E-value=1.1e-16 Score=142.65 Aligned_cols=185 Identities=15% Similarity=0.136 Sum_probs=121.0
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhc--------C-CCceeeeccCCCHHHHHHHhc-----
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF--------G-TYVESMAGDASNKKFLKTALR----- 162 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~--------~-~~v~~v~~D~~d~~~l~~~~~----- 162 (306)
..+++++||||+|+||++++++|+++|++|+++.|+.++..+.. + .++.++.+|++|.++++++++
T Consensus 5 ~~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 84 (250)
T 3nyw_A 5 KQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQK 84 (250)
T ss_dssp CCCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHHh
Confidence 35789999999999999999999999999999999987633211 2 568899999999988877765
Q ss_pred --CccEEEEcCCch-------------------------hh----hcccccCCCEEEEecCcccccCCCCcccccchHHH
Q 021854 163 --GVRSIICPSEGF-------------------------IS----NAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR 211 (306)
Q Consensus 163 --~~d~vi~~~~g~-------------------------~~----~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~ 211 (306)
.+|++||+++-. +. ..+++.+..+||++||..+..+..+...|..+++.
T Consensus 85 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa 164 (250)
T 3nyw_A 85 YGAVDILVNAAAMFMDGSLSEPVDNFRKIMEINVIAQYGILKTVTEIMKVQKNGYIFNVASRAAKYGFADGGIYGSTKFA 164 (250)
T ss_dssp HCCEEEEEECCCCCCCCCCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC-------CCTTHHHHHHHH
T ss_pred cCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEccHHhcCCCCCCcchHHHHHH
Confidence 679999984410 11 11234567899999999887754455566554332
Q ss_pred H--HHHHHHHHHHhcCCCEEEEEcCcccCCCCCCcceeeecCCCCccccCHHHHHHHHHHHhhCCCC---CCcEEEEec
Q 021854 212 K--LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQ---TGLIFEVVN 285 (306)
Q Consensus 212 ~--~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~~~~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~~---~g~~~~v~~ 285 (306)
. +.+.....+...+++++.|+||++......... .......+++++|+|++++.++.++.. .+..+.|.+
T Consensus 165 ~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~----~~~~~~~~~~p~dva~~v~~l~s~~~~~~~~~~~i~vd~ 239 (250)
T 3nyw_A 165 LLGLAESLYRELAPLGIRVTTLCPGWVNTDMAKKAG----TPFKDEEMIQPDDLLNTIRCLLNLSENVCIKDIVFEMKK 239 (250)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHTT----CCSCGGGSBCHHHHHHHHHHHHTSCTTEECCEEEEEEHH
T ss_pred HHHHHHHHHHHhhhcCcEEEEEecCcccCchhhhcC----CCcccccCCCHHHHHHHHHHHHcCCCceEeeEEEEEeec
Confidence 1 112222223456999999999986432110000 011224578999999999999987653 233444443
|
| >4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.70 E-value=3.6e-16 Score=140.58 Aligned_cols=189 Identities=17% Similarity=0.167 Sum_probs=122.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEE-ecCcchhhh------hcCCCceeeeccCCCHHHHHHHhc-------C
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKAL-VKDKRNAME------SFGTYVESMAGDASNKKFLKTALR-------G 163 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l-~R~~~~~~~------~~~~~v~~v~~D~~d~~~l~~~~~-------~ 163 (306)
.+++|+||||+|+||++++++|+++|++|+++ .|+.+.... ..+.++.++.+|++|.++++++++ .
T Consensus 25 ~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 104 (272)
T 4e3z_A 25 DTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQFGR 104 (272)
T ss_dssp CSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence 46899999999999999999999999999887 555544221 124578899999999988887765 6
Q ss_pred ccEEEEcCC-----ch----------------------hhhc----ccc---cCCCEEEEecCcccccCCC-Ccccccch
Q 021854 164 VRSIICPSE-----GF----------------------ISNA----GSL---KGVQHVILLSQLSVYRGSG-GIQALMKG 208 (306)
Q Consensus 164 ~d~vi~~~~-----g~----------------------~~~~----a~~---~gvkr~V~iSS~~~~~~~~-~~~~~~~~ 208 (306)
+|++||+++ .. +..+ ..+ .+.++||++||..++.+.. ....|..+
T Consensus 105 id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~as 184 (272)
T 4e3z_A 105 LDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGSATQYVDYAAS 184 (272)
T ss_dssp CCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHHCCTTTCHHHHHH
T ss_pred CCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhccCCCCCcchhHHH
Confidence 799999843 10 0011 111 2457899999988876543 44456544
Q ss_pred HHHH--HHHHHHHHHHhcCCCEEEEEcCcccCCCCCC-----cceeeecCCCCccccCHHHHHHHHHHHhhCCC--CCCc
Q 021854 209 NARK--LAEQDESMLMASGIPYTIIRTGVLQNTPGGK-----QGFQFEEGCAANGSLSKEDAAFICVEALESIP--QTGL 279 (306)
Q Consensus 209 ~a~~--~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~-----~~~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~ 279 (306)
++.. +.+.....+...+++++.|+||++....... ....+........+.+++|+|++++.++.... ..|+
T Consensus 185 Kaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~s~~~~~~tG~ 264 (272)
T 4e3z_A 185 KAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDLHASGGLPDRAREMAPSVPMQRAGMPEEVADAILYLLSPSASYVTGS 264 (272)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEECSBC------------------CCTTSSCBCHHHHHHHHHHHHSGGGTTCCSC
T ss_pred HHHHHHHHHHHHHHHHHcCcEEEEEecCCCcCCcccccCChHHHHHHhhcCCcCCCcCHHHHHHHHHHHhCCccccccCC
Confidence 3321 1111222233469999999999865332111 00011122222345679999999999996543 4689
Q ss_pred EEEEecC
Q 021854 280 IFEVVNG 286 (306)
Q Consensus 280 ~~~v~~g 286 (306)
+|++.+|
T Consensus 265 ~i~vdgG 271 (272)
T 4e3z_A 265 ILNVSGG 271 (272)
T ss_dssp EEEESTT
T ss_pred EEeecCC
Confidence 9999876
|
| >4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} | Back alignment and structure |
|---|
Probab=99.69 E-value=6.4e-16 Score=138.42 Aligned_cols=192 Identities=15% Similarity=0.107 Sum_probs=134.7
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhh------hcCCCceeeeccCCCHHHHHHHhc-------
Q 021854 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTALR------- 162 (306)
Q Consensus 96 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~------~~~~~v~~v~~D~~d~~~l~~~~~------- 162 (306)
.+.+|+++||||+++||+++++.|+++|++|+++.|+.+++++ ..+.++..+.+|++|+++++++++
T Consensus 4 sL~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G 83 (254)
T 4fn4_A 4 SLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETYS 83 (254)
T ss_dssp GGTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 3568999999999999999999999999999999999876432 234578899999999988877654
Q ss_pred CccEEEEcCCc------h-------------------------hhhcccccCCCEEEEecCcccccCCCCcccccchHHH
Q 021854 163 GVRSIICPSEG------F-------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR 211 (306)
Q Consensus 163 ~~d~vi~~~~g------~-------------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~ 211 (306)
.+|++|++++- + ....+++.+-.+||++||..+..+......|..+++.
T Consensus 84 ~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~g~~~~~~~~~Y~asKaa 163 (254)
T 4fn4_A 84 RIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAGIRGGFAGAPYTVAKHG 163 (254)
T ss_dssp CCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCSSSSCHHHHHHHHH
T ss_pred CCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEechhhcCCCCCChHHHHHHHH
Confidence 57999988431 0 1122445666899999999988877777777655432
Q ss_pred --HHHHHHHHHHHhcCCCEEEEEcCcccCCCCCC----ccee---eecC-CCCccccCHHHHHHHHHHHhhCCC--CCCc
Q 021854 212 --KLAEQDESMLMASGIPYTIIRTGVLQNTPGGK----QGFQ---FEEG-CAANGSLSKEDAAFICVEALESIP--QTGL 279 (306)
Q Consensus 212 --~~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~----~~~~---~~~g-~~~~~~Is~~DVA~~iv~aL~~~~--~~g~ 279 (306)
.+.+.....+...||++..|.||++....... .... +... ....-+-.++|||.++++++.+.. -.|+
T Consensus 164 l~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~R~g~pediA~~v~fLaSd~a~~iTG~ 243 (254)
T 4fn4_A 164 LIGLTRSIAAHYGDQGIRAVAVLPGTVKTNIGLGSSKPSELGMRTLTKLMSLSSRLAEPEDIANVIVFLASDEASFVNGD 243 (254)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECSBCSSCTTSCSSCCHHHHHHHHHHHTTCCCCBCHHHHHHHHHHHHSGGGTTCCSC
T ss_pred HHHHHHHHHHHhhhhCeEEEEEEeCCCCCcccccccCCcHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHhCchhcCCcCC
Confidence 22233334455689999999999865332111 0000 0000 011234578999999999986543 4689
Q ss_pred EEEEecCC
Q 021854 280 IFEVVNGE 287 (306)
Q Consensus 280 ~~~v~~g~ 287 (306)
++.|.+|-
T Consensus 244 ~i~VDGG~ 251 (254)
T 4fn4_A 244 AVVVDGGL 251 (254)
T ss_dssp EEEESTTG
T ss_pred EEEeCCCc
Confidence 99998763
|
| >3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.69 E-value=1.6e-16 Score=141.73 Aligned_cols=189 Identities=12% Similarity=0.081 Sum_probs=125.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCC--CeEEEEecCcchhhh---hcCCCceeeeccCCCHHHHHHHhc-------Ccc
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALR-------GVR 165 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g--~~V~~l~R~~~~~~~---~~~~~v~~v~~D~~d~~~l~~~~~-------~~d 165 (306)
|+|+++||||+|+||++++++|+++| +.|+++.|+.++..+ ..+.++.++.+|++|.++++++++ .+|
T Consensus 1 Mgk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id 80 (254)
T 3kzv_A 1 MGKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYGDRFFYVVGDITEDSVLKQLVNAAVKGHGKID 80 (254)
T ss_dssp -CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHHGGGEEEEESCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred CCCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHhcCCcc
Confidence 47899999999999999999999985 789999998876432 234578899999999998887775 679
Q ss_pred EEEEcCCch---------------------------hhhc----ccccCCCEEEEecCcccccCCCCcccccchHHHHHH
Q 021854 166 SIICPSEGF---------------------------ISNA----GSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLA 214 (306)
Q Consensus 166 ~vi~~~~g~---------------------------~~~~----a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~~~ 214 (306)
++||+++.. +..+ +++.+ .+||++||..++.+..+...|..+++....
T Consensus 81 ~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-g~iv~isS~~~~~~~~~~~~Y~asK~a~~~ 159 (254)
T 3kzv_A 81 SLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTN-GNVVFVSSDACNMYFSSWGAYGSSKAALNH 159 (254)
T ss_dssp EEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCSCCCCSSCCSHHHHHHHHHHHH
T ss_pred EEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CeEEEEcCchhccCCCCcchHHHHHHHHHH
Confidence 999884310 1111 23345 799999999988777676677654432211
Q ss_pred HHHHHHHHh-cCCCEEEEEcCcccCCCCCCccee-------------eecCCCCccccCHHHHHHHHHHHhhCCC---CC
Q 021854 215 EQDESMLMA-SGIPYTIIRTGVLQNTPGGKQGFQ-------------FEEGCAANGSLSKEDAAFICVEALESIP---QT 277 (306)
Q Consensus 215 ~~aE~~l~~-sgi~~tiiRPg~l~~~~~~~~~~~-------------~~~g~~~~~~Is~~DVA~~iv~aL~~~~---~~ 277 (306)
.++.+-.+ .+++++.|+||++........... +........+.+++|+|++++.++.+.. ..
T Consensus 160 -~~~~la~e~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~p~dva~~v~~L~s~~~~~~it 238 (254)
T 3kzv_A 160 -FAMTLANEERQVKAIAVAPGIVDTDMQVNIRENVGPSSMSAEQLKMFRGLKENNQLLDSSVPATVYAKLALHGIPDGVN 238 (254)
T ss_dssp -HHHHHHHHCTTSEEEEEECSSCCCCCSCCCCCCCCTTTSCHHHHHHHHHHHTTC----CHHHHHHHHHHHHHCCCGGGT
T ss_pred -HHHHHHhhccCcEEEEEeCCcccchhHHHhhcccCccccCHHHHHHHHHHHhcCCcCCcccHHHHHHHHHhhcccCCCC
Confidence 11111112 589999999998653322110000 0001112335688999999999998663 56
Q ss_pred CcEEEEecCCc
Q 021854 278 GLIFEVVNGEE 288 (306)
Q Consensus 278 g~~~~v~~g~~ 288 (306)
|+.+++.+++.
T Consensus 239 G~~i~vdg~~~ 249 (254)
T 3kzv_A 239 GQYLSYNDPAL 249 (254)
T ss_dssp TCEEETTCGGG
T ss_pred ccEEEecCccc
Confidence 88998887653
|
| >3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.69 E-value=1.2e-16 Score=143.65 Aligned_cols=192 Identities=12% Similarity=0.133 Sum_probs=131.7
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh-------c-CCCceeeeccCCCHHHHHHHhc---Ccc
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------F-GTYVESMAGDASNKKFLKTALR---GVR 165 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~-------~-~~~v~~v~~D~~d~~~l~~~~~---~~d 165 (306)
..+|+++||||+|+||++++++|+++|++|+++.|+.++..+. . ...+..+.+|++|.+.++++++ .+|
T Consensus 8 l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id 87 (267)
T 3t4x_A 8 LKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEKYPKVD 87 (267)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHHCCCCS
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHhcCCCC
Confidence 4579999999999999999999999999999999998763321 1 2357788999999998888776 679
Q ss_pred EEEEcCCch------------------------------hhhcccccCCCEEEEecCcccccCCCCcccccchHHHHH--
Q 021854 166 SIICPSEGF------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKL-- 213 (306)
Q Consensus 166 ~vi~~~~g~------------------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~~-- 213 (306)
++||+++.. +...+.+.+.++||++||..++.+..+...|..+++...
T Consensus 88 ~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l 167 (267)
T 3t4x_A 88 ILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEGRVIFIASEAAIMPSQEMAHYSATKTMQLSL 167 (267)
T ss_dssp EEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTEEEEEEECCGGGTSCCTTCHHHHHHHHHHHHH
T ss_pred EEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEEcchhhccCCCcchHHHHHHHHHHHH
Confidence 999984410 111233456789999999998887777777765443211
Q ss_pred HHHHHHHHHhcCCCEEEEEcCcccCCC--------CCCccee--------e---ecCCCCccccCHHHHHHHHHHHhhCC
Q 021854 214 AEQDESMLMASGIPYTIIRTGVLQNTP--------GGKQGFQ--------F---EEGCAANGSLSKEDAAFICVEALESI 274 (306)
Q Consensus 214 ~~~aE~~l~~sgi~~tiiRPg~l~~~~--------~~~~~~~--------~---~~g~~~~~~Is~~DVA~~iv~aL~~~ 274 (306)
.+.....+...++++..|+||++.... ....... . ........+.+++|||++++.++.+.
T Consensus 168 ~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~fL~s~~ 247 (267)
T 3t4x_A 168 SRSLAELTTGTNVTVNTIMPGSTLTEGVETMLNSLYPNEQLTIEEAEKRFMKENRPTSIIQRLIRPEEIAHLVTFLSSPL 247 (267)
T ss_dssp HHHHHHHTTTSEEEEEEEEECCBCCHHHHHHHHHSSTTSCCCHHHHHHHHHHHHCTTCSSCSCBCTHHHHHHHHHHHSGG
T ss_pred HHHHHHHhCCCCeEEEEEeCCeecCccHHHHHhhcCcccCCCHHHHHHHHhhccCCcccccCccCHHHHHHHHHHHcCcc
Confidence 111111222357999999999854221 0000000 0 00111245778999999999998753
Q ss_pred --CCCCcEEEEecCCc
Q 021854 275 --PQTGLIFEVVNGEE 288 (306)
Q Consensus 275 --~~~g~~~~v~~g~~ 288 (306)
.-.|++++|.+|..
T Consensus 248 ~~~itG~~i~vdGG~~ 263 (267)
T 3t4x_A 248 SSAINGSALRIDGGLV 263 (267)
T ss_dssp GTTCCSCEEEESTTCS
T ss_pred ccCccCCeEEECCCcc
Confidence 34689999998753
|
| >4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.69 E-value=6.8e-16 Score=139.92 Aligned_cols=180 Identities=12% Similarity=0.041 Sum_probs=120.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh-------cCCCceeeeccCCCHHHHHHHhc-------C
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------FGTYVESMAGDASNKKFLKTALR-------G 163 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~-------~~~~v~~v~~D~~d~~~l~~~~~-------~ 163 (306)
.+|+++||||+|+||++++++|+++|++|+++.|+.++..+. .+..+.++.+|++|.++++++++ .
T Consensus 32 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 111 (281)
T 4dry_A 32 EGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAEFAR 111 (281)
T ss_dssp --CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 479999999999999999999999999999999998763321 12335889999999988887765 5
Q ss_pred ccEEEEcCCch-------------------------------hhhcccccC--CCEEEEecCcccccCCCCcccccchHH
Q 021854 164 VRSIICPSEGF-------------------------------ISNAGSLKG--VQHVILLSQLSVYRGSGGIQALMKGNA 210 (306)
Q Consensus 164 ~d~vi~~~~g~-------------------------------~~~~a~~~g--vkr~V~iSS~~~~~~~~~~~~~~~~~a 210 (306)
+|++||+++.. ....+.+.+ ..+||++||..+..+..+...|..+++
T Consensus 112 iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~asKa 191 (281)
T 4dry_A 112 LDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQTPRPNSAPYTATKH 191 (281)
T ss_dssp CSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGTCCCTTCHHHHHHHH
T ss_pred CCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhCCCCCCChhHHHHHH
Confidence 69999984310 011122232 569999999998887777777765543
Q ss_pred HH--HHHHHHHHHHhcCCCEEEEEcCcccCCCCCCc-ceeee-cC-CCCccccCHHHHHHHHHHHhhCCCCC
Q 021854 211 RK--LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQ-GFQFE-EG-CAANGSLSKEDAAFICVEALESIPQT 277 (306)
Q Consensus 211 ~~--~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~~-~~~~~-~g-~~~~~~Is~~DVA~~iv~aL~~~~~~ 277 (306)
.. +.+.....+...+|+++.|+||++........ ..... .. .....+++++|+|+++++++.++...
T Consensus 192 a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~fL~s~~~~~ 263 (281)
T 4dry_A 192 AITGLTKSTALDGRMHDIACGQIDIGNAATDMTARMSTGVLQANGEVAAEPTIPIEHIAEAVVYMASLPLSA 263 (281)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEEECBCC-------CEEECTTSCEEECCCBCHHHHHHHHHHHHHSCTTE
T ss_pred HHHHHHHHHHHHhcccCeEEEEEEECcCcChhhhhhcchhhhhhhcccccCCCCHHHHHHHHHHHhCCCccC
Confidence 22 11222222345799999999998653321110 00000 00 11234678999999999999987653
|
| >3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} | Back alignment and structure |
|---|
Probab=99.69 E-value=3.7e-16 Score=140.15 Aligned_cols=195 Identities=13% Similarity=0.093 Sum_probs=125.8
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcch---hhh------hcCCCceeeeccCCCHHHHHHHhc----
Q 021854 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN---AME------SFGTYVESMAGDASNKKFLKTALR---- 162 (306)
Q Consensus 96 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~---~~~------~~~~~v~~v~~D~~d~~~l~~~~~---- 162 (306)
...+|+++||||+++||++++++|+++|++|+++.|.... +.+ ..+.++.++.+|++|.++++++++
T Consensus 8 ~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 87 (262)
T 3ksu_A 8 DLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAEK 87 (262)
T ss_dssp CCTTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence 3457999999999999999999999999999999876432 111 124568899999999998888775
Q ss_pred ---CccEEEEcCCch--------------------------hhhcccc--cCCCEEEEecCcccccCCCCcccccchHHH
Q 021854 163 ---GVRSIICPSEGF--------------------------ISNAGSL--KGVQHVILLSQLSVYRGSGGIQALMKGNAR 211 (306)
Q Consensus 163 ---~~d~vi~~~~g~--------------------------~~~~a~~--~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~ 211 (306)
.+|++||+++.. +.+++.. .+..++|++||..+..+......|..+++.
T Consensus 88 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~~~~~Y~asKaa 167 (262)
T 3ksu_A 88 EFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIATSLLAAYTGFYSTYAGNKAP 167 (262)
T ss_dssp HHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECCCHHHHHHCCCCC-----CH
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEechhhccCCCCCchhHHHHHH
Confidence 679999984410 1111111 234689999998887665556667654432
Q ss_pred H--HHHHHHHHHHhcCCCEEEEEcCcccCCC-----CCCcceeeecCCCCccccCHHHHHHHHHHHhhCCC-CCCcEEEE
Q 021854 212 K--LAEQDESMLMASGIPYTIIRTGVLQNTP-----GGKQGFQFEEGCAANGSLSKEDAAFICVEALESIP-QTGLIFEV 283 (306)
Q Consensus 212 ~--~~~~aE~~l~~sgi~~tiiRPg~l~~~~-----~~~~~~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~-~~g~~~~v 283 (306)
. +.+.....+...++++..|+||++.... .......+........+.+++|+|++++.++.+.. -.|+.+.+
T Consensus 168 ~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~~L~s~~~~itG~~i~v 247 (262)
T 3ksu_A 168 VEHYTRAASKELMKQQISVNAIAPGPMDTSFFYGQETKESTAFHKSQAMGNQLTKIEDIAPIIKFLTTDGWWINGQTIFA 247 (262)
T ss_dssp HHHHHHHHHHHTTTTTCEEEEEEECCCCTHHHHTCC------------CCCCSCCGGGTHHHHHHHHTTTTTCCSCEEEE
T ss_pred HHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccCchHHHHHHHhcCcccCCCCHHHHHHHHHHHcCCCCCccCCEEEE
Confidence 2 1222222233468999999999864211 11110111111222346789999999999998622 46899999
Q ss_pred ecCCcCH
Q 021854 284 VNGEEKV 290 (306)
Q Consensus 284 ~~g~~s~ 290 (306)
.+|...+
T Consensus 248 dGg~~~~ 254 (262)
T 3ksu_A 248 NGGYTTR 254 (262)
T ss_dssp STTCCCC
T ss_pred CCCccCC
Confidence 9887543
|
| >3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.69 E-value=1.1e-16 Score=145.71 Aligned_cols=192 Identities=13% Similarity=0.099 Sum_probs=131.7
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCC---eEEEEecCcchhhhh-------c-CCCceeeeccCCCHHHHHHHhc---
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRT---RIKALVKDKRNAMES-------F-GTYVESMAGDASNKKFLKTALR--- 162 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~---~V~~l~R~~~~~~~~-------~-~~~v~~v~~D~~d~~~l~~~~~--- 162 (306)
..+|+++||||+|+||++++++|+++|+ +|+++.|+.++..+. . +.++.++.+|++|.++++++++
T Consensus 31 l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 110 (287)
T 3rku_A 31 LAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENLP 110 (287)
T ss_dssp HTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTSC
T ss_pred cCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHH
Confidence 3579999999999999999999999998 999999998764321 1 3468899999999999988876
Q ss_pred ----CccEEEEcCCch---------------------------hh----hcccccCCCEEEEecCcccccCCCCcccccc
Q 021854 163 ----GVRSIICPSEGF---------------------------IS----NAGSLKGVQHVILLSQLSVYRGSGGIQALMK 207 (306)
Q Consensus 163 ----~~d~vi~~~~g~---------------------------~~----~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~ 207 (306)
.+|++|++++.. +. ..+++.+..+||++||..++.+..+...|..
T Consensus 111 ~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~~~~Y~a 190 (287)
T 3rku_A 111 QEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGRDAYPTGSIYCA 190 (287)
T ss_dssp GGGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHHHH
T ss_pred HhcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECChhhcCCCCCCchHHH
Confidence 469999984310 11 1124467789999999998877767667765
Q ss_pred hHHHHH--HHHHHHHHHhcCCCEEEEEcCcccCCCC----CCcceeeecCCCCccccCHHHHHHHHHHHhhCCCC--CCc
Q 021854 208 GNARKL--AEQDESMLMASGIPYTIIRTGVLQNTPG----GKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQ--TGL 279 (306)
Q Consensus 208 ~~a~~~--~~~aE~~l~~sgi~~tiiRPg~l~~~~~----~~~~~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~~--~g~ 279 (306)
+++... .+.....+...+|+++.|+||++..... ...............+++++|||++++.++.++.. .++
T Consensus 191 sKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~~pedvA~~v~~l~s~~~~~i~g~ 270 (287)
T 3rku_A 191 SKFAVGAFTDSLRKELINTKIRVILIAPGLVETEFSLVRYRGNEEQAKNVYKDTTPLMADDVADLIVYATSRKQNTVIAD 270 (287)
T ss_dssp HHHHHHHHHHHHHHHTTTSSCEEEEEEESCEESSHHHHHTTTCHHHHHHHHTTSCCEEHHHHHHHHHHHHTSCTTEEEEE
T ss_pred HHHHHHHHHHHHHHHhhhcCCEEEEEeCCcCcCccccccccCcHHHHHHhhcccCCCCHHHHHHHHHHHhCCCCCeEecc
Confidence 443211 1111122234789999999998653321 00000000000112356899999999999987653 478
Q ss_pred EEEEecCCc
Q 021854 280 IFEVVNGEE 288 (306)
Q Consensus 280 ~~~v~~g~~ 288 (306)
++.+.++..
T Consensus 271 ~i~v~~g~~ 279 (287)
T 3rku_A 271 TLIFPTNQA 279 (287)
T ss_dssp EEEEETTEE
T ss_pred eEEeeCCCC
Confidence 888887653
|
| >3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.69 E-value=9.1e-16 Score=140.16 Aligned_cols=191 Identities=13% Similarity=0.088 Sum_probs=130.2
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCc------------chhh------hhcCCCceeeeccCCCHHHHH
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK------------RNAM------ESFGTYVESMAGDASNKKFLK 158 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~------------~~~~------~~~~~~v~~v~~D~~d~~~l~ 158 (306)
..+|+++||||+++||++++++|+++|++|+++.|+. +++. ...+.++.++.+|++|.++++
T Consensus 26 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~ 105 (299)
T 3t7c_A 26 VEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDAMQ 105 (299)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHH
Confidence 4579999999999999999999999999999999872 2211 123457889999999999888
Q ss_pred HHhc-------CccEEEEcCCc------h---------------------hhhc----ccc-cCCCEEEEecCcccccCC
Q 021854 159 TALR-------GVRSIICPSEG------F---------------------ISNA----GSL-KGVQHVILLSQLSVYRGS 199 (306)
Q Consensus 159 ~~~~-------~~d~vi~~~~g------~---------------------~~~~----a~~-~gvkr~V~iSS~~~~~~~ 199 (306)
++++ .+|++|++++. . +..+ +.+ .+..+||++||..++.+.
T Consensus 106 ~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~isS~~~~~~~ 185 (299)
T 3t7c_A 106 AAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLRGA 185 (299)
T ss_dssp HHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEEEEECCGGGTSCC
T ss_pred HHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCC
Confidence 7775 68999998431 0 0111 122 236799999999988777
Q ss_pred CCcccccchHHHH--HHHHHHHHHHhcCCCEEEEEcCcccCCCCCCcc-----------eee--------ecCCCCcccc
Q 021854 200 GGIQALMKGNARK--LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQG-----------FQF--------EEGCAANGSL 258 (306)
Q Consensus 200 ~~~~~~~~~~a~~--~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~~~-----------~~~--------~~g~~~~~~I 258 (306)
.....|..+++.. +.+.....+...||+++.|+||++......... ... ........+.
T Consensus 186 ~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~r~~ 265 (299)
T 3t7c_A 186 ENIGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPMLLNEPTYRMFRPDLENPTVEDFQVASRQMHVLPIPYV 265 (299)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHHHHHSSSSCSCB
T ss_pred CCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCccCccccccchhhhhhhhhccchhhHHHHHhhhhcccCcCCC
Confidence 7777776544322 112222223456999999999986533221100 000 0001113467
Q ss_pred CHHHHHHHHHHHhhCCC--CCCcEEEEecCC
Q 021854 259 SKEDAAFICVEALESIP--QTGLIFEVVNGE 287 (306)
Q Consensus 259 s~~DVA~~iv~aL~~~~--~~g~~~~v~~g~ 287 (306)
+++|||++++.++.+.. -.|++++|.+|.
T Consensus 266 ~pedvA~~v~fL~s~~a~~itG~~i~vdGG~ 296 (299)
T 3t7c_A 266 EPADISNAILFLVSDDARYITGVSLPVDGGA 296 (299)
T ss_dssp CHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred CHHHHHHHHHHHhCcccccCcCCEEeeCCCc
Confidence 89999999999997543 468999998774
|
| >4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=99.69 E-value=1.1e-16 Score=144.71 Aligned_cols=190 Identities=12% Similarity=0.081 Sum_probs=130.4
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh------cCCCceeeeccCCCHHHHHHHhc------Cc
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR------GV 164 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~~~------~~ 164 (306)
..+|+++||||+|+||++++++|+++|++|+++.|+.++..+. .+..+.++.+|++|.++++++++ .+
T Consensus 31 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~g~i 110 (275)
T 4imr_A 31 LRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEAIAPV 110 (275)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHHHSCC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHhCCC
Confidence 4579999999999999999999999999999999988763321 24578899999999888877765 68
Q ss_pred cEEEEcCCch--------------------------hh----hcccccCCCEEEEecCcccccCCCCcccccchHHHH--
Q 021854 165 RSIICPSEGF--------------------------IS----NAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK-- 212 (306)
Q Consensus 165 d~vi~~~~g~--------------------------~~----~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~-- 212 (306)
|++|++++.. +. ..+.+.+..+||++||..++.+......|..+++..
T Consensus 111 D~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~ 190 (275)
T 4imr_A 111 DILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARKWGRVVSIGSINQLRPKSVVTAYAATKAAQHN 190 (275)
T ss_dssp CEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHH
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCCCCchhhHHHHHHHHH
Confidence 9999984410 11 112345678999999998887665555565544321
Q ss_pred HHHHHHHHHHhcCCCEEEEEcCcccCCCCCC----ccee---eecCC-CCccccCHHHHHHHHHHHhhCCC--CCCcEEE
Q 021854 213 LAEQDESMLMASGIPYTIIRTGVLQNTPGGK----QGFQ---FEEGC-AANGSLSKEDAAFICVEALESIP--QTGLIFE 282 (306)
Q Consensus 213 ~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~----~~~~---~~~g~-~~~~~Is~~DVA~~iv~aL~~~~--~~g~~~~ 282 (306)
+.+.....+...+|+++.|+||++....... .... +.... ....+.+++|+|++++.++.+.. -.|+++.
T Consensus 191 l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~fL~s~~a~~itG~~i~ 270 (275)
T 4imr_A 191 LIQSQARDFAGDNVLLNTLAPGLVDTDRNADRRAQDPEGWDEYVRTLNWMGRAGRPEEMVGAALFLASEACSFMTGETIF 270 (275)
T ss_dssp HHHHHHHHHGGGTEEEEEEEESSBCSHHHHHHHHHCHHHHHHHHHHHSTTCSCBCGGGGHHHHHHHHSGGGTTCCSCEEE
T ss_pred HHHHHHHHhcccCcEEEEEEeccccCcccccccccChHHHHHHHhhcCccCCCcCHHHHHHHHHHHcCcccCCCCCCEEE
Confidence 1122222234469999999999865321100 0000 00000 12335688999999999987543 4689999
Q ss_pred EecC
Q 021854 283 VVNG 286 (306)
Q Consensus 283 v~~g 286 (306)
|.+|
T Consensus 271 vdGG 274 (275)
T 4imr_A 271 LTGG 274 (275)
T ss_dssp ESSC
T ss_pred eCCC
Confidence 9876
|
| >3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A | Back alignment and structure |
|---|
Probab=99.69 E-value=3.8e-16 Score=139.13 Aligned_cols=187 Identities=10% Similarity=0.074 Sum_probs=128.8
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh-------cCCCceeeeccC--CCHHHHHHHhc-----
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------FGTYVESMAGDA--SNKKFLKTALR----- 162 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~-------~~~~v~~v~~D~--~d~~~l~~~~~----- 162 (306)
..+|+++||||+|+||++++++|+++|++|+++.|+.++..+. .+..+.++.+|+ +|.++++++++
T Consensus 10 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 89 (252)
T 3f1l_A 10 LNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIAVN 89 (252)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHHHh
Confidence 4579999999999999999999999999999999998763321 233788999999 88888777665
Q ss_pred --CccEEEEcCCc-----h----------------------hhh----cccccCCCEEEEecCcccccCCCCcccccchH
Q 021854 163 --GVRSIICPSEG-----F----------------------ISN----AGSLKGVQHVILLSQLSVYRGSGGIQALMKGN 209 (306)
Q Consensus 163 --~~d~vi~~~~g-----~----------------------~~~----~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~ 209 (306)
.+|++||+++. . +.+ .+++.+.++||++||..++.+..+...|..++
T Consensus 90 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK 169 (252)
T 3f1l_A 90 YPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASK 169 (252)
T ss_dssp CSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred CCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCCCCEEEEECChhhccCCCCCchhHHHH
Confidence 68999998431 0 111 12456778999999999887776666775543
Q ss_pred HHHHHHHHHHHHHh--cCCCEEEEEcCcccCCCCCCcceeeecCCCCccccCHHHHHHHHHHHhhCCC--CCCcEEEEec
Q 021854 210 ARKLAEQDESMLMA--SGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVN 285 (306)
Q Consensus 210 a~~~~~~aE~~l~~--sgi~~tiiRPg~l~~~~~~~~~~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~~~v~~ 285 (306)
+.... ..+.+-.+ ..++++.|+||++....... .+ .......+.+++|+|.++++++.+.. -.|+++++.+
T Consensus 170 ~a~~~-l~~~la~e~~~~irvn~v~PG~v~t~~~~~---~~-~~~~~~~~~~p~dva~~~~~L~s~~~~~itG~~i~vdg 244 (252)
T 3f1l_A 170 FATEG-MMQVLADEYQQRLRVNCINPGGTRTAMRAS---AF-PTEDPQKLKTPADIMPLYLWLMGDDSRRKTGMTFDAQP 244 (252)
T ss_dssp HHHHH-HHHHHHHHTTTTCEEEEEECCSBSSHHHHH---HC-TTCCGGGSBCTGGGHHHHHHHHSGGGTTCCSCEEESSC
T ss_pred HHHHH-HHHHHHHHhcCCcEEEEEecCcccCchhhh---hC-CccchhccCCHHHHHHHHHHHcCccccCCCCCEEEeCC
Confidence 32111 11111111 23999999999865321100 00 11112346788999999999997643 4689999998
Q ss_pred CCc
Q 021854 286 GEE 288 (306)
Q Consensus 286 g~~ 288 (306)
|..
T Consensus 245 G~~ 247 (252)
T 3f1l_A 245 GRK 247 (252)
T ss_dssp C--
T ss_pred CcC
Confidence 764
|
| >3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} | Back alignment and structure |
|---|
Probab=99.69 E-value=2.4e-16 Score=140.32 Aligned_cols=182 Identities=13% Similarity=0.117 Sum_probs=123.5
Q ss_pred CccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhc-------CccEE
Q 021854 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR-------GVRSI 167 (306)
Q Consensus 95 ~~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~-------~~d~v 167 (306)
...|+|+|+||||+|+||++++++|+++|++|+++.|+.++.. -..+.+|++|.++++++++ .+|++
T Consensus 18 ~~~m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~------~~~~~~d~~d~~~v~~~~~~~~~~~g~iD~l 91 (251)
T 3orf_A 18 GSHMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNA------DHSFTIKDSGEEEIKSVIEKINSKSIKVDTF 91 (251)
T ss_dssp ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTS------SEEEECSCSSHHHHHHHHHHHHTTTCCEEEE
T ss_pred ccccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc------ccceEEEeCCHHHHHHHHHHHHHHcCCCCEE
Confidence 3456899999999999999999999999999999999986643 2457789999988887765 45999
Q ss_pred EEcCCc------h---------------------hhhcccc--cCCCEEEEecCcccccCCCCcccccchHHHHHHHHHH
Q 021854 168 ICPSEG------F---------------------ISNAGSL--KGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDE 218 (306)
Q Consensus 168 i~~~~g------~---------------------~~~~a~~--~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~~~~~aE 218 (306)
||+++. . +.+++.. ..-.+||++||..++.+..+...|..+++.... .++
T Consensus 92 i~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaa~~~-~~~ 170 (251)
T 3orf_A 92 VCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGASAALNRTSGMIAYGATKAATHH-IIK 170 (251)
T ss_dssp EECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTTBHHHHHHHHHHHH-HHH
T ss_pred EECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEechhhccCCCCCchhHHHHHHHHH-HHH
Confidence 998441 0 1111111 112589999999988776666667554332111 111
Q ss_pred HHHH-----hcCCCEEEEEcCcccCCCCCCcceeeecCCCCccccCHHHHHHHHHHHhhC---CCCCCcEEEEecCC
Q 021854 219 SMLM-----ASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALES---IPQTGLIFEVVNGE 287 (306)
Q Consensus 219 ~~l~-----~sgi~~tiiRPg~l~~~~~~~~~~~~~~g~~~~~~Is~~DVA~~iv~aL~~---~~~~g~~~~v~~g~ 287 (306)
.+-+ ..+++++.|+||++...... . +........+++++|+|++++.++.+ ....|+++++.++.
T Consensus 171 ~la~e~~~~~~gi~v~~v~PG~v~t~~~~--~--~~~~~~~~~~~~~~dva~~i~~l~~~~~~~~~tG~~i~v~~g~ 243 (251)
T 3orf_A 171 DLASENGGLPAGSTSLGILPVTLDTPTNR--K--YMSDANFDDWTPLSEVAEKLFEWSTNSDSRPTNGSLVKFETKS 243 (251)
T ss_dssp HHTSTTSSSCTTCEEEEEEESCBCCHHHH--H--HCTTSCGGGSBCHHHHHHHHHHHHHCGGGCCCTTCEEEEEEET
T ss_pred HHHHHhcccCCCcEEEEEecCcCcCcchh--h--hcccccccccCCHHHHHHHHHHHhcCccccCCcceEEEEecCC
Confidence 1111 35899999999986432110 0 01112234578999999999999988 34578999998765
|
| >4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A* | Back alignment and structure |
|---|
Probab=99.68 E-value=1.4e-15 Score=136.55 Aligned_cols=191 Identities=12% Similarity=0.082 Sum_probs=132.4
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhh-----hhcCCCceeeeccCCCHHHHHHHhc-------C
Q 021854 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM-----ESFGTYVESMAGDASNKKFLKTALR-------G 163 (306)
Q Consensus 96 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~-----~~~~~~v~~v~~D~~d~~~l~~~~~-------~ 163 (306)
...+|+++||||+++||+++++.|+++|++|+++.|+.+... ...+.++.++.+|++|+++++++++ .
T Consensus 4 ~L~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~G~ 83 (258)
T 4gkb_A 4 NLQDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGAFLDALAQRQPRATYLPVELQDDAQCRDAVAQTIATFGR 83 (258)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHHHHHHHHhcCCCEEEEEeecCCHHHHHHHHHHHHHHhCC
Confidence 456899999999999999999999999999999999886521 1234678899999999888776653 5
Q ss_pred ccEEEEcCCch-----------------------------hhhcccccCCCEEEEecCcccccCCCCcccccchHHH--H
Q 021854 164 VRSIICPSEGF-----------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--K 212 (306)
Q Consensus 164 ~d~vi~~~~g~-----------------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~--~ 212 (306)
+|++|++++-. ....+++.+ .++|++||..+..+......|..+++. .
T Consensus 84 iDiLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-G~IVnisS~~~~~~~~~~~~Y~asKaav~~ 162 (258)
T 4gkb_A 84 LDGLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATR-GAIVNISSKTAVTGQGNTSGYCASKGAQLA 162 (258)
T ss_dssp CCEEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTHHHHCCSSCHHHHHHHHHHHH
T ss_pred CCEEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CeEEEEeehhhccCCCCchHHHHHHHHHHH
Confidence 79999984410 111133333 799999999988877777777665432 1
Q ss_pred HHHHHHHHHHhcCCCEEEEEcCcccCCCCCCc------ce-e---eecCCCC-ccccCHHHHHHHHHHHhhCCC--CCCc
Q 021854 213 LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQ------GF-Q---FEEGCAA-NGSLSKEDAAFICVEALESIP--QTGL 279 (306)
Q Consensus 213 ~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~~------~~-~---~~~g~~~-~~~Is~~DVA~~iv~aL~~~~--~~g~ 279 (306)
+.+.....+...||++..|.||++........ .. . +...... .-+-.++|||.++++++.+.. -.|+
T Consensus 163 ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~plg~R~g~peeiA~~v~fLaS~~a~~iTG~ 242 (258)
T 4gkb_A 163 LTREWAVALREHGVRVNAVIPAEVMTPLYRNWIATFEDPEAKLAEIAAKVPLGRRFTTPDEIADTAVFLLSPRASHTTGE 242 (258)
T ss_dssp HHHHHHHHHGGGTCEEEEEEECSBCCSCC-----------CHHHHHHTTCTTTTSCBCHHHHHHHHHHHHSGGGTTCCSC
T ss_pred HHHHHHHHhcccCeEEEEEecCCCCChhHhhhhhcccChHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHhCchhcCccCC
Confidence 22333344556899999999998653221110 00 0 0011111 135678999999999986543 4789
Q ss_pred EEEEecCC
Q 021854 280 IFEVVNGE 287 (306)
Q Consensus 280 ~~~v~~g~ 287 (306)
++.|.+|-
T Consensus 243 ~i~VDGG~ 250 (258)
T 4gkb_A 243 WLFVDGGY 250 (258)
T ss_dssp EEEESTTT
T ss_pred eEEECCCc
Confidence 99998875
|
| >4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=99.68 E-value=2.6e-16 Score=139.34 Aligned_cols=186 Identities=13% Similarity=0.087 Sum_probs=127.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHH-CCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhc-----CccEEEEcC
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIV-KRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR-----GVRSIICPS 171 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~-~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~-----~~d~vi~~~ 171 (306)
.+|+++||||+|+||++++++|++ .|++|+++.|+.+.. ...+.++.+|++|.++++++++ .+|++||++
T Consensus 3 ~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~~----~~~~~~~~~Dv~~~~~v~~~~~~~~~~~id~lv~nA 78 (244)
T 4e4y_A 3 AMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFS----AENLKFIKADLTKQQDITNVLDIIKNVSFDGIFLNA 78 (244)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCCC----CTTEEEEECCTTCHHHHHHHHHHTTTCCEEEEEECC
T ss_pred CCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEeccccccc----cccceEEecCcCCHHHHHHHHHHHHhCCCCEEEECC
Confidence 468999999999999999999999 789999998887521 2357899999999999988876 679999984
Q ss_pred Cch--------------------------hhhccccc--CCCEEEEecCcccccCCCCcccccchHHHHH--HHHHHHHH
Q 021854 172 EGF--------------------------ISNAGSLK--GVQHVILLSQLSVYRGSGGIQALMKGNARKL--AEQDESML 221 (306)
Q Consensus 172 ~g~--------------------------~~~~a~~~--gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~~--~~~aE~~l 221 (306)
+.. +.+++... .-.++|++||..++.+..+...|..+++... .+.....+
T Consensus 79 g~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~ 158 (244)
T 4e4y_A 79 GILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVGASIVFNGSDQCFIAKPNSFAYTLSKGAIAQMTKSLALDL 158 (244)
T ss_dssp CCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEEEEEEEECCGGGTCCCTTBHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccCcEEEEECCHHHccCCCCCchhHHHHHHHHHHHHHHHHHH
Confidence 410 11111111 1158999999998877777667765443221 12222223
Q ss_pred HhcCCCEEEEEcCcccCCCCCC---------------cceeeecCCCCccccCHHHHHHHHHHHhhCCC--CCCcEEEEe
Q 021854 222 MASGIPYTIIRTGVLQNTPGGK---------------QGFQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVV 284 (306)
Q Consensus 222 ~~sgi~~tiiRPg~l~~~~~~~---------------~~~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~~~v~ 284 (306)
...+++++.|+||++....... ....+........+.+++|+|++++.++.++. ..|+++++.
T Consensus 159 ~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~~~~~itG~~i~vd 238 (244)
T 4e4y_A 159 AKYQIRVNTVCPGTVDTDLYRNLIQKYANNVGISFDEAQKQEEKEFPLNRIAQPQEIAELVIFLLSDKSKFMTGGLIPID 238 (244)
T ss_dssp GGGTCEEEEEEESCBCCHHHHHHHHHHHHHHTCCHHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred HHcCeEEEEEecCccCchhhHHHHHhhhhhcCCCHHHHHHHHhhcCCCCCCcCHHHHHHHHHHHhcCccccccCCeEeEC
Confidence 4579999999999864321100 00001112223457789999999999997543 468999998
Q ss_pred cCC
Q 021854 285 NGE 287 (306)
Q Consensus 285 ~g~ 287 (306)
+|.
T Consensus 239 GG~ 241 (244)
T 4e4y_A 239 GGY 241 (244)
T ss_dssp TTG
T ss_pred CCc
Confidence 774
|
| >2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... | Back alignment and structure |
|---|
Probab=99.68 E-value=5.6e-16 Score=140.59 Aligned_cols=192 Identities=14% Similarity=0.088 Sum_probs=127.9
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCc-chhhh-------hcCCCceeeeccCCC----HHHHHHHhc-
Q 021854 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK-RNAME-------SFGTYVESMAGDASN----KKFLKTALR- 162 (306)
Q Consensus 96 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~-~~~~~-------~~~~~v~~v~~D~~d----~~~l~~~~~- 162 (306)
...+++++||||+|+||++++++|+++|++|+++.|+. ++..+ ..+.++.++.+|++| .++++++++
T Consensus 20 ~l~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~ 99 (288)
T 2x9g_A 20 HMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEIINS 99 (288)
T ss_dssp --CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHHHH
Confidence 34579999999999999999999999999999999998 54321 224578899999999 888877765
Q ss_pred ------CccEEEEcCCc----hh-----hh-------------------------------cccccC------CCEEEEe
Q 021854 163 ------GVRSIICPSEG----FI-----SN-------------------------------AGSLKG------VQHVILL 190 (306)
Q Consensus 163 ------~~d~vi~~~~g----~~-----~~-------------------------------~a~~~g------vkr~V~i 190 (306)
++|++||+++. .+ .+ .+.+.+ ..+||++
T Consensus 100 ~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iv~i 179 (288)
T 2x9g_A 100 CFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNL 179 (288)
T ss_dssp HHHHHSCCCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--------CCCEEEEEE
T ss_pred HHHhcCCCCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCCCCCeEEEEE
Confidence 78999998431 01 11 112223 5699999
Q ss_pred cCcccccCCCCcccccchHHHH--HHHHHHHHHHhcCCCEEEEEcCcccCCCCCCcce--eeecCCCCccc-cCHHHHHH
Q 021854 191 SQLSVYRGSGGIQALMKGNARK--LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGF--QFEEGCAANGS-LSKEDAAF 265 (306)
Q Consensus 191 SS~~~~~~~~~~~~~~~~~a~~--~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~~~~--~~~~g~~~~~~-Is~~DVA~ 265 (306)
||..++.+..+...|..+++.. +.+.....+...+|+++.|+||++.......... .+........+ .+++|+|+
T Consensus 180 sS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~p~~r~~~~pedvA~ 259 (288)
T 2x9g_A 180 CDAMVDQPCMAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPVAMGEEEKDKWRRKVPLGRREASAEQIAD 259 (288)
T ss_dssp CCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSCSCCTTSCHHHHHHHHHTCTTTSSCCCHHHHHH
T ss_pred ecccccCCCCCCchHHHHHHHHHHHHHHHHHHhhccCeEEEEEEeccccCccccChHHHHHHHhhCCCCCCCCCHHHHHH
Confidence 9998887766666676544321 1222222344569999999999865433110000 00011112234 78999999
Q ss_pred HHHHHhhCC--CCCCcEEEEecCC
Q 021854 266 ICVEALESI--PQTGLIFEVVNGE 287 (306)
Q Consensus 266 ~iv~aL~~~--~~~g~~~~v~~g~ 287 (306)
+++.++... ...|+.+.+.+|.
T Consensus 260 ~v~~l~s~~~~~itG~~i~vdGG~ 283 (288)
T 2x9g_A 260 AVIFLVSGSAQYITGSIIKVDGGL 283 (288)
T ss_dssp HHHHHHSGGGTTCCSCEEEESTTG
T ss_pred HHHHHhCccccCccCCEEEECcch
Confidence 999999753 2468889888764
|
| >1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.68 E-value=3.1e-16 Score=141.24 Aligned_cols=191 Identities=14% Similarity=0.063 Sum_probs=128.1
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhc--CCCceeeeccCCCHHHHHHHhc-------CccEE
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF--GTYVESMAGDASNKKFLKTALR-------GVRSI 167 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~--~~~v~~v~~D~~d~~~l~~~~~-------~~d~v 167 (306)
..+++++||||+|+||++++++|+++|++|+++.|+.++..+.. -.++.++.+|++|.++++++++ ++|++
T Consensus 7 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l 86 (270)
T 1yde_A 7 YAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDCV 86 (270)
T ss_dssp TTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCeEEEcCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 35789999999999999999999999999999999987643221 1247889999999998887775 68999
Q ss_pred EEcCCc-----h----------------------hhhccc---ccCCCEEEEecCcccccCCCCcccccchHHHH--HHH
Q 021854 168 ICPSEG-----F----------------------ISNAGS---LKGVQHVILLSQLSVYRGSGGIQALMKGNARK--LAE 215 (306)
Q Consensus 168 i~~~~g-----~----------------------~~~~a~---~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~--~~~ 215 (306)
||+++. . +.+++. ..+.++||++||..+..+......|..+++.. +.+
T Consensus 87 v~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~ 166 (270)
T 1yde_A 87 VNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAIGQAQAVPYVATKGAVTAMTK 166 (270)
T ss_dssp EECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHHHCCTTCHHHHHHHHHHHHHHH
T ss_pred EECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCEEEEEcCccccCCCCCCcccHHHHHHHHHHHH
Confidence 998431 0 011111 11258999999987766655555665543321 112
Q ss_pred HHHHHHHhcCCCEEEEEcCcccCCCC------CCcce-ee---ecCCCCccccCHHHHHHHHHHHhhCCC-CCCcEEEEe
Q 021854 216 QDESMLMASGIPYTIIRTGVLQNTPG------GKQGF-QF---EEGCAANGSLSKEDAAFICVEALESIP-QTGLIFEVV 284 (306)
Q Consensus 216 ~aE~~l~~sgi~~tiiRPg~l~~~~~------~~~~~-~~---~~g~~~~~~Is~~DVA~~iv~aL~~~~-~~g~~~~v~ 284 (306)
.....+...++++++|+||++..... ..... .+ ........+.+++|+|++++.++.+.. ..|+++.|.
T Consensus 167 ~la~e~~~~gi~vn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v~~L~s~~~~itG~~i~vd 246 (270)
T 1yde_A 167 ALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPLGRMGQPAEVGAAAVFLASEANFCTGIELLVT 246 (270)
T ss_dssp HHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHHHCTTCCSCEEEES
T ss_pred HHHHHhhhhCcEEEEEEeCccccchhhhhhhcccchHHHHHHHhhcCCCCCCcCHHHHHHHHHHHcccCCCcCCCEEEEC
Confidence 22222345799999999998643210 00000 00 001112335789999999999987633 468999999
Q ss_pred cCC
Q 021854 285 NGE 287 (306)
Q Consensus 285 ~g~ 287 (306)
+|.
T Consensus 247 GG~ 249 (270)
T 1yde_A 247 GGA 249 (270)
T ss_dssp TTT
T ss_pred CCe
Confidence 875
|
| >3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A* | Back alignment and structure |
|---|
Probab=99.68 E-value=1.5e-15 Score=135.86 Aligned_cols=191 Identities=13% Similarity=0.032 Sum_probs=128.6
Q ss_pred cCCCeEEEEcCCCh--HHHHHHHHHHHCCCeEEEEecCcchhh------hhcCC-CceeeeccCCCHHHHHHHhc-----
Q 021854 97 EARDAVLVTDGDSD--IGQMVILSLIVKRTRIKALVKDKRNAM------ESFGT-YVESMAGDASNKKFLKTALR----- 162 (306)
Q Consensus 97 ~~~~~ilVtGatG~--iG~~l~~~L~~~g~~V~~l~R~~~~~~------~~~~~-~v~~v~~D~~d~~~l~~~~~----- 162 (306)
..+++++||||+|+ ||++++++|+++|++|+++.|+.+... +..+. ++.++.+|++|.++++++++
T Consensus 5 l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 84 (266)
T 3oig_A 5 LEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKEQ 84 (266)
T ss_dssp CTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHHH
T ss_pred cCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHHH
Confidence 45799999999977 999999999999999999999864311 12233 68999999999888877765
Q ss_pred --CccEEEEcCCc--------h----------------------hhhcccc--cCCCEEEEecCcccccCCCCcccccch
Q 021854 163 --GVRSIICPSEG--------F----------------------ISNAGSL--KGVQHVILLSQLSVYRGSGGIQALMKG 208 (306)
Q Consensus 163 --~~d~vi~~~~g--------~----------------------~~~~a~~--~gvkr~V~iSS~~~~~~~~~~~~~~~~ 208 (306)
.+|++||+++. . +..++.. .+-.+||++||..++.+......|..+
T Consensus 85 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as 164 (266)
T 3oig_A 85 VGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYLGGELVMPNYNVMGVA 164 (266)
T ss_dssp HSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSCCTTTHHHHHH
T ss_pred hCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEecccccccCCCcchhHHH
Confidence 67999998331 0 1111111 123589999999988776666667554
Q ss_pred HHHH--HHHHHHHHHHhcCCCEEEEEcCcccCCCCCCc-c--e---eeecCCCCccccCHHHHHHHHHHHhhCCC--CCC
Q 021854 209 NARK--LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQ-G--F---QFEEGCAANGSLSKEDAAFICVEALESIP--QTG 278 (306)
Q Consensus 209 ~a~~--~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~~-~--~---~~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g 278 (306)
++.. +.+.....+...+++++.|+||++........ . . .+........+.+++|+|++++.++.++. ..|
T Consensus 165 Kaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~p~dva~~v~~l~s~~~~~~tG 244 (266)
T 3oig_A 165 KASLDASVKYLAADLGKENIRVNSISAGPIRTLSAKGISDFNSILKDIEERAPLRRTTTPEEVGDTAAFLFSDMSRGITG 244 (266)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGGTTCCS
T ss_pred HHHHHHHHHHHHHHHhhcCcEEEEEecCcccccccccccchHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCCchhcCcC
Confidence 4321 11222222345689999999998653221110 0 0 00011122346789999999999997643 568
Q ss_pred cEEEEecCC
Q 021854 279 LIFEVVNGE 287 (306)
Q Consensus 279 ~~~~v~~g~ 287 (306)
+++++.+|-
T Consensus 245 ~~i~vdGG~ 253 (266)
T 3oig_A 245 ENLHVDSGF 253 (266)
T ss_dssp CEEEESTTG
T ss_pred CEEEECCCe
Confidence 999999875
|
| >3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.68 E-value=7.8e-16 Score=138.51 Aligned_cols=191 Identities=14% Similarity=0.047 Sum_probs=124.4
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCc-chhhh------hcCCCceeeeccCCCHHHHHHHhc-------
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK-RNAME------SFGTYVESMAGDASNKKFLKTALR------- 162 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~-~~~~~------~~~~~v~~v~~D~~d~~~l~~~~~------- 162 (306)
..+|+++||||+|+||++++++|+++|++|+++.+.. +...+ ..+.++.++.+|++|.++++++++
T Consensus 25 ~~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 104 (267)
T 3u5t_A 25 ETNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEAFG 104 (267)
T ss_dssp --CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 3478999999999999999999999999999885544 33221 224578899999999998887775
Q ss_pred CccEEEEcCCch--------------------------hhhcccc--cCCCEEEEecCcccccCCCCcccccchHHHHH-
Q 021854 163 GVRSIICPSEGF--------------------------ISNAGSL--KGVQHVILLSQLSVYRGSGGIQALMKGNARKL- 213 (306)
Q Consensus 163 ~~d~vi~~~~g~--------------------------~~~~a~~--~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~~- 213 (306)
.+|++||+++-. +..++.. ..-.+||++||..+..+......|..+++...
T Consensus 105 ~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~ 184 (267)
T 3u5t_A 105 GVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMSTSQVGLLHPSYGIYAAAKAGVEA 184 (267)
T ss_dssp CEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCTHHHHCCTTCHHHHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeChhhccCCCCchHHHHHHHHHHH
Confidence 689999984410 0111110 11358999999988777666666755433221
Q ss_pred -HHHHHHHHHhcCCCEEEEEcCcccCCCCCC---cc--eeeecCCCCccccCHHHHHHHHHHHhhCCC--CCCcEEEEec
Q 021854 214 -AEQDESMLMASGIPYTIIRTGVLQNTPGGK---QG--FQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVN 285 (306)
Q Consensus 214 -~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~---~~--~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~~~v~~ 285 (306)
.+.....+...+|+++.|+||++....... .. ..+........+.+++|+|++++.++.... -.|+++.+.+
T Consensus 185 l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdG 264 (267)
T 3u5t_A 185 MTHVLSKELRGRDITVNAVAPGPTATDLFLEGKSDEVRDRFAKLAPLERLGTPQDIAGAVAFLAGPDGAWVNGQVLRANG 264 (267)
T ss_dssp HHHHHHHHTTTSCCEEEEEEECCBC-----------CHHHHHTSSTTCSCBCHHHHHHHHHHHHSTTTTTCCSEEEEESS
T ss_pred HHHHHHHHhhhhCCEEEEEEECCCcCccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccCCEEEeCC
Confidence 111111223468999999999865332110 00 001122223456789999999999987543 3689999987
Q ss_pred CC
Q 021854 286 GE 287 (306)
Q Consensus 286 g~ 287 (306)
|-
T Consensus 265 G~ 266 (267)
T 3u5t_A 265 GI 266 (267)
T ss_dssp SC
T ss_pred Cc
Confidence 63
|
| >2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=99.68 E-value=1.2e-15 Score=138.27 Aligned_cols=191 Identities=13% Similarity=0.003 Sum_probs=126.2
Q ss_pred cCCCeEEEEcCC--ChHHHHHHHHHHHCCCeEEEEecCcc---hhhhhc--CCCceeeeccCCCHHHHHHHhc-------
Q 021854 97 EARDAVLVTDGD--SDIGQMVILSLIVKRTRIKALVKDKR---NAMESF--GTYVESMAGDASNKKFLKTALR------- 162 (306)
Q Consensus 97 ~~~~~ilVtGat--G~iG~~l~~~L~~~g~~V~~l~R~~~---~~~~~~--~~~v~~v~~D~~d~~~l~~~~~------- 162 (306)
..+++|+||||+ |+||++++++|+++|++|+++.|+.+ ...+.. ...+.++.+|++|.++++++++
T Consensus 19 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 98 (285)
T 2p91_A 19 LEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLEKRVREIAKGFGSDLVVKCDVSLDEDIKNLKKFLEENWG 98 (285)
T ss_dssp TTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred cCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 457899999999 99999999999999999999999874 111111 1247889999999998887775
Q ss_pred CccEEEEcCCc---------h---------------------hhhccccc---CCCEEEEecCcccccCCCCcccccchH
Q 021854 163 GVRSIICPSEG---------F---------------------ISNAGSLK---GVQHVILLSQLSVYRGSGGIQALMKGN 209 (306)
Q Consensus 163 ~~d~vi~~~~g---------~---------------------~~~~a~~~---gvkr~V~iSS~~~~~~~~~~~~~~~~~ 209 (306)
++|++||+++. + +.+++... +-++||++||..++.+......|..++
T Consensus 99 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK 178 (285)
T 2p91_A 99 SLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGRNGAIVTLSYYGAEKVVPHYNVMGIAK 178 (285)
T ss_dssp CCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTSCCEEEEEECGGGTSBCTTTTHHHHHH
T ss_pred CCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCEEEEEccchhccCCCCccHHHHHH
Confidence 67999998431 0 01111111 237999999988876655555665443
Q ss_pred HHH--HHHHHHHHHHhcCCCEEEEEcCcccCCCCCCc-c--ee---eecCCCCccccCHHHHHHHHHHHhhCCC--CCCc
Q 021854 210 ARK--LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQ-G--FQ---FEEGCAANGSLSKEDAAFICVEALESIP--QTGL 279 (306)
Q Consensus 210 a~~--~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~~-~--~~---~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~ 279 (306)
+.. +.+.....+...+|++++|+||++........ . .. +........+.+++|+|++++.++.... ..|+
T Consensus 179 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dva~~~~~l~s~~~~~~tG~ 258 (285)
T 2p91_A 179 AALESTVRYLAYDIAKHGHRINAISAGPVKTLAAYSITGFHLLMEHTTKVNPFGKPITIEDVGDTAVFLCSDWARAITGE 258 (285)
T ss_dssp HHHHHHHHHHHHHHHTTTCEEEEEEECCCCCSCC--CTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHTSGGGTTCCSC
T ss_pred HHHHHHHHHHHHHhcccCcEEEEEEeCcccCchhhcccchHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCCcccCCCCC
Confidence 321 11222223445799999999998654322110 0 00 0001112346789999999999986533 3688
Q ss_pred EEEEecCC
Q 021854 280 IFEVVNGE 287 (306)
Q Consensus 280 ~~~v~~g~ 287 (306)
.|++.+|.
T Consensus 259 ~~~vdgg~ 266 (285)
T 2p91_A 259 VVHVDNGY 266 (285)
T ss_dssp EEEESTTG
T ss_pred EEEECCCc
Confidence 99998874
|
| >3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.68 E-value=1.5e-15 Score=137.20 Aligned_cols=191 Identities=14% Similarity=0.069 Sum_probs=124.1
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecC------------cchhh------hhcCCCceeeeccCCCHHHHH
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKD------------KRNAM------ESFGTYVESMAGDASNKKFLK 158 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~------------~~~~~------~~~~~~v~~v~~D~~d~~~l~ 158 (306)
..+|++|||||+|+||++++++|+++|++|+++.|+ .+... ...+.++.++.+|++|.++++
T Consensus 8 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~ 87 (287)
T 3pxx_A 8 VQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAVS 87 (287)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHH
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHHHH
Confidence 457999999999999999999999999999999987 22211 122457889999999999888
Q ss_pred HHhc-------CccEEEEcCCch------------------------hhhcccc--cCCCEEEEecCcccccCC------
Q 021854 159 TALR-------GVRSIICPSEGF------------------------ISNAGSL--KGVQHVILLSQLSVYRGS------ 199 (306)
Q Consensus 159 ~~~~-------~~d~vi~~~~g~------------------------~~~~a~~--~gvkr~V~iSS~~~~~~~------ 199 (306)
++++ .+|++||+++.. +.+++.. .+..+||++||..++.+.
T Consensus 88 ~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~ 167 (287)
T 3pxx_A 88 RELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGSVAGLIAAAQPPGA 167 (287)
T ss_dssp HHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCHHHHHHHHCCC--
T ss_pred HHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEeccchhcccccccccc
Confidence 7775 789999984310 1111211 234689999998776432
Q ss_pred -----CCcccccchHHHH--HHHHHHHHHHhcCCCEEEEEcCcccCCCCCCc------------cee-------eecCCC
Q 021854 200 -----GGIQALMKGNARK--LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQ------------GFQ-------FEEGCA 253 (306)
Q Consensus 200 -----~~~~~~~~~~a~~--~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~~------------~~~-------~~~g~~ 253 (306)
.+...|..+++.. +.+.....+...+|+++.|+||++........ ... ......
T Consensus 168 ~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (287)
T 3pxx_A 168 GGPQGPGGAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSAPMYRQFRPDLEAPSRADALLAFPAMQAM 247 (287)
T ss_dssp ---CHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESSBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHGGGGCSS
T ss_pred cccCCCccchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccccccccccchhhhhccccccchhHHHHhhhhhhccc
Confidence 2223343322211 11111122334699999999999653322110 000 001111
Q ss_pred CccccCHHHHHHHHHHHhhCCC--CCCcEEEEecCC
Q 021854 254 ANGSLSKEDAAFICVEALESIP--QTGLIFEVVNGE 287 (306)
Q Consensus 254 ~~~~Is~~DVA~~iv~aL~~~~--~~g~~~~v~~g~ 287 (306)
...+.+++|||++++.++.+.. -.|++++|.+|.
T Consensus 248 ~~~~~~p~dva~~v~fL~s~~a~~itG~~i~vdGG~ 283 (287)
T 3pxx_A 248 PTPYVEASDISNAVCFLASDESRYVTGLQFKVDAGA 283 (287)
T ss_dssp SCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred CCCCCCHHHHHhhHheecchhhcCCCCceEeECchh
Confidence 2456789999999999996543 468999999875
|
| >3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A* | Back alignment and structure |
|---|
Probab=99.67 E-value=2.9e-15 Score=136.71 Aligned_cols=191 Identities=9% Similarity=0.001 Sum_probs=129.5
Q ss_pred ccCCCeEEEEcCCC--hHHHHHHHHHHHCCCeEEEEecCcchhh------hhcCCCceeeeccCCCHHHHHHHhc-----
Q 021854 96 EEARDAVLVTDGDS--DIGQMVILSLIVKRTRIKALVKDKRNAM------ESFGTYVESMAGDASNKKFLKTALR----- 162 (306)
Q Consensus 96 ~~~~~~ilVtGatG--~iG~~l~~~L~~~g~~V~~l~R~~~~~~------~~~~~~v~~v~~D~~d~~~l~~~~~----- 162 (306)
...+|+++||||+| +||++++++|+++|++|+++.|+.+... +.. ..+.++.+|++|.++++++++
T Consensus 27 ~l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~ 105 (296)
T 3k31_A 27 LMEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESL-GVKLTVPCDVSDAESVDNMFKVLAEE 105 (296)
T ss_dssp TTTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHH-TCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred ccCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhc-CCeEEEEcCCCCHHHHHHHHHHHHHH
Confidence 44579999999997 9999999999999999999999875321 112 346889999999998888775
Q ss_pred --CccEEEEcCCc--------h----------------------hhhcccc--cCCCEEEEecCcccccCCCCcccccch
Q 021854 163 --GVRSIICPSEG--------F----------------------ISNAGSL--KGVQHVILLSQLSVYRGSGGIQALMKG 208 (306)
Q Consensus 163 --~~d~vi~~~~g--------~----------------------~~~~a~~--~gvkr~V~iSS~~~~~~~~~~~~~~~~ 208 (306)
.+|++||+++- . +.+++.. ....+||++||..++.+......|..+
T Consensus 106 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS~~~~~~~~~~~~Y~as 185 (296)
T 3k31_A 106 WGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSYYGAEKVVPHYNVMGVC 185 (296)
T ss_dssp HSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSCCTTTTHHHHH
T ss_pred cCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEehhhccCCCCchhhHHH
Confidence 57999998431 0 0111111 124599999999888776666667554
Q ss_pred HHHH--HHHHHHHHHHhcCCCEEEEEcCcccCCCCCCcce------eeecCCCCccccCHHHHHHHHHHHhhCC--CCCC
Q 021854 209 NARK--LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGF------QFEEGCAANGSLSKEDAAFICVEALESI--PQTG 278 (306)
Q Consensus 209 ~a~~--~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~~~~------~~~~g~~~~~~Is~~DVA~~iv~aL~~~--~~~g 278 (306)
++.. +.+.....+...+|+++.|+||++.......... .+........+.+++|||++++.++.+. ...|
T Consensus 186 Kaal~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~fL~s~~a~~itG 265 (296)
T 3k31_A 186 KAALEASVKYLAVDLGKQQIRVNAISAGPVRTLASSGISDFHYILTWNKYNSPLRRNTTLDDVGGAALYLLSDLGRGTTG 265 (296)
T ss_dssp HHHHHHHHHHHHHHHHTTTEEEEEEEECCCCCSSCCSCHHHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGGTTCCS
T ss_pred HHHHHHHHHHHHHHHhhcCcEEEEEEECCCcCchhhcccchHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCCccCCccC
Confidence 4321 1222222344579999999999865432211100 0001112234678999999999999753 3568
Q ss_pred cEEEEecCC
Q 021854 279 LIFEVVNGE 287 (306)
Q Consensus 279 ~~~~v~~g~ 287 (306)
++++|.+|.
T Consensus 266 ~~i~vdGG~ 274 (296)
T 3k31_A 266 ETVHVDCGY 274 (296)
T ss_dssp CEEEESTTG
T ss_pred CEEEECCCc
Confidence 999999875
|
| >1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... | Back alignment and structure |
|---|
Probab=99.67 E-value=3.1e-16 Score=142.05 Aligned_cols=175 Identities=14% Similarity=0.140 Sum_probs=120.2
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh------cC-CCceeeeccCCCHHHHHHHhc-------
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FG-TYVESMAGDASNKKFLKTALR------- 162 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~------~~-~~v~~v~~D~~d~~~l~~~~~------- 162 (306)
..+++|+||||+|+||++++++|+++|++|+++.|+.++..+. .+ .++.++.+|++|.++++++++
T Consensus 26 ~~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g 105 (286)
T 1xu9_A 26 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMG 105 (286)
T ss_dssp GTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHT
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence 4579999999999999999999999999999999998764321 12 368899999999988877765
Q ss_pred CccEEEEcC-Cch-------------------------hhhccc---ccCCCEEEEecCcccccCCCCcccccchHHHHH
Q 021854 163 GVRSIICPS-EGF-------------------------ISNAGS---LKGVQHVILLSQLSVYRGSGGIQALMKGNARKL 213 (306)
Q Consensus 163 ~~d~vi~~~-~g~-------------------------~~~~a~---~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~~ 213 (306)
++|++||++ +.. +..++. ..+.++||++||..++.+..+...|..+++...
T Consensus 106 ~iD~li~naag~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~ 185 (286)
T 1xu9_A 106 GLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAYPMVAAYSASKFALD 185 (286)
T ss_dssp SCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGTSCCTTCHHHHHHHHHHH
T ss_pred CCCEEEECCccCCCCccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHCCCEEEEECCcccccCCCCccHHHHHHHHHH
Confidence 789999873 310 011111 123479999999988776666666765443221
Q ss_pred --HHHHHHHH--HhcCCCEEEEEcCcccCCCCCCcceeeecCCCCccccCHHHHHHHHHHHhhCCC
Q 021854 214 --AEQDESML--MASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIP 275 (306)
Q Consensus 214 --~~~aE~~l--~~sgi~~tiiRPg~l~~~~~~~~~~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~ 275 (306)
.+.....+ ...++++++++||++........ . .+......++++|+|+.++.++..+.
T Consensus 186 ~~~~~l~~e~~~~~~~i~v~~v~Pg~v~t~~~~~~---~-~~~~~~~~~~~~~vA~~i~~~~~~~~ 247 (286)
T 1xu9_A 186 GFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKA---V-SGIVHMQAAPKEECALEIIKGGALRQ 247 (286)
T ss_dssp HHHHHHHHHHHHHTCCCEEEEEEECCBCCHHHHHH---S-CGGGGGGCBCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHhhcCCCeEEEEeecCccCChhHHHh---c-cccccCCCCCHHHHHHHHHHHHhcCC
Confidence 11111122 45689999999998653211000 0 11112357899999999999998653
|
| >3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=99.67 E-value=7.8e-16 Score=141.88 Aligned_cols=192 Identities=13% Similarity=0.075 Sum_probs=129.4
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCc------------chhh------hhcCCCceeeeccCCCHHHH
Q 021854 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK------------RNAM------ESFGTYVESMAGDASNKKFL 157 (306)
Q Consensus 96 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~------------~~~~------~~~~~~v~~v~~D~~d~~~l 157 (306)
...+|+++||||+|+||++++++|+++|++|+++.|+. +.+. ...+..+.++.+|++|.+++
T Consensus 43 ~l~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v 122 (317)
T 3oec_A 43 RLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLASL 122 (317)
T ss_dssp TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHH
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHH
Confidence 34579999999999999999999999999999998762 2211 11245788999999999988
Q ss_pred HHHhc-------CccEEEEcCCch--------------------------hhh----cccccC-CCEEEEecCcccccCC
Q 021854 158 KTALR-------GVRSIICPSEGF--------------------------ISN----AGSLKG-VQHVILLSQLSVYRGS 199 (306)
Q Consensus 158 ~~~~~-------~~d~vi~~~~g~--------------------------~~~----~a~~~g-vkr~V~iSS~~~~~~~ 199 (306)
+++++ .+|++||+++.. +.. .+.+.+ -.+||++||..++.+.
T Consensus 123 ~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~isS~~~~~~~ 202 (317)
T 3oec_A 123 QAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLRGA 202 (317)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEECCGGGSSCC
T ss_pred HHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEECcHHhcCCC
Confidence 88775 689999984410 111 122232 4689999999988777
Q ss_pred CCcccccchHHHH--HHHHHHHHHHhcCCCEEEEEcCcccCCCCC------------Ccce------ee-ecCCCCcccc
Q 021854 200 GGIQALMKGNARK--LAEQDESMLMASGIPYTIIRTGVLQNTPGG------------KQGF------QF-EEGCAANGSL 258 (306)
Q Consensus 200 ~~~~~~~~~~a~~--~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~------------~~~~------~~-~~g~~~~~~I 258 (306)
.+...|..+++.. +.+.....+...||+++.|+||++...... .... .+ ........+.
T Consensus 203 ~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 282 (317)
T 3oec_A 203 PGQSHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEMALNEKLLKMFLPHLENPTREDAAELFSQLTLLPIPWV 282 (317)
T ss_dssp TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHCHHHHHHHCTTCSSCCHHHHHHHHTTTCSSSSSSB
T ss_pred CCCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCccccchhhhhhhhhhccccchhHHHHHHhhhccCCCCCC
Confidence 7766776544322 112222223456999999999986432100 0000 00 0011114567
Q ss_pred CHHHHHHHHHHHhhCCC--CCCcEEEEecCC
Q 021854 259 SKEDAAFICVEALESIP--QTGLIFEVVNGE 287 (306)
Q Consensus 259 s~~DVA~~iv~aL~~~~--~~g~~~~v~~g~ 287 (306)
+++|||+++++++.+.. -.|++++|.+|.
T Consensus 283 ~pedvA~av~fL~s~~a~~itG~~i~vdGG~ 313 (317)
T 3oec_A 283 EPEDVSNAVAWLASDEARYIHGAAIPVDGGQ 313 (317)
T ss_dssp CHHHHHHHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred CHHHHHHHHHHHcCCcccCCCCCEEEECcch
Confidence 99999999999986543 468999999875
|
| >2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.67 E-value=1.2e-15 Score=141.47 Aligned_cols=190 Identities=11% Similarity=-0.001 Sum_probs=130.4
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEe-cCcchhhh-------hcCCCceeeeccCCCHH-------------
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALV-KDKRNAME-------SFGTYVESMAGDASNKK------------- 155 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~-R~~~~~~~-------~~~~~v~~v~~D~~d~~------------- 155 (306)
..+++++||||+|+||++++++|+++|++|+++. |+.++..+ ..+.++.++.+|++|.+
T Consensus 44 l~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~ 123 (328)
T 2qhx_A 44 PTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPV 123 (328)
T ss_dssp -CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCC-------CCB
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCeEEEEEeeCCCchhcccccccccccc
Confidence 3578999999999999999999999999999999 98765322 22457889999999988
Q ss_pred ----HHHHHhc-------CccEEEEcCCc------------------------h----------------hhh----ccc
Q 021854 156 ----FLKTALR-------GVRSIICPSEG------------------------F----------------ISN----AGS 180 (306)
Q Consensus 156 ----~l~~~~~-------~~d~vi~~~~g------------------------~----------------~~~----~a~ 180 (306)
+++++++ .+|++||+++. . +.+ .+.
T Consensus 124 ~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~ 203 (328)
T 2qhx_A 124 TLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVA 203 (328)
T ss_dssp CHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-------------CHHHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8877765 78999998431 0 001 122
Q ss_pred ccC------CCEEEEecCcccccCCCCcccccchHHHH--HHHHHHHHHHhcCCCEEEEEcCcccCCCCCCccee---ee
Q 021854 181 LKG------VQHVILLSQLSVYRGSGGIQALMKGNARK--LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQ---FE 249 (306)
Q Consensus 181 ~~g------vkr~V~iSS~~~~~~~~~~~~~~~~~a~~--~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~~~~~---~~ 249 (306)
+.+ .++||++||..++.+..+...|..+++.. +.+.....+...+|+++.|+||++.... ...... +.
T Consensus 204 ~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~-~~~~~~~~~~~ 282 (328)
T 2qhx_A 204 GTPAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD-DMPPAVWEGHR 282 (328)
T ss_dssp HSCGGGSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCC-CSCHHHHHHHH
T ss_pred hcCCcCCCCCcEEEEECchhhccCCCCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCCc-cccHHHHHHHH
Confidence 334 67999999998887766666676544322 1122222234569999999999965433 111000 00
Q ss_pred cCCCCc-cccCHHHHHHHHHHHhhCC--CCCCcEEEEecCC
Q 021854 250 EGCAAN-GSLSKEDAAFICVEALESI--PQTGLIFEVVNGE 287 (306)
Q Consensus 250 ~g~~~~-~~Is~~DVA~~iv~aL~~~--~~~g~~~~v~~g~ 287 (306)
...... .+.+++|+|++++.++... ...|+++.+.+|.
T Consensus 283 ~~~p~~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~ 323 (328)
T 2qhx_A 283 SKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGY 323 (328)
T ss_dssp TTCTTTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred hhCCCCCCCCCHHHHHHHHHHHhCccccCccCcEEEECCCc
Confidence 111122 4678999999999999653 3468899998774
|
| >2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A* | Back alignment and structure |
|---|
Probab=99.67 E-value=6.6e-16 Score=138.15 Aligned_cols=189 Identities=12% Similarity=0.129 Sum_probs=125.1
Q ss_pred CCCeEEEEcCC--ChHHHHHHHHHHHCCCeEEEEecCcc---hhhh---hcCCCceeeeccCCCHHHHHHHhc-------
Q 021854 98 ARDAVLVTDGD--SDIGQMVILSLIVKRTRIKALVKDKR---NAME---SFGTYVESMAGDASNKKFLKTALR------- 162 (306)
Q Consensus 98 ~~~~ilVtGat--G~iG~~l~~~L~~~g~~V~~l~R~~~---~~~~---~~~~~v~~v~~D~~d~~~l~~~~~------- 162 (306)
.+|+++||||+ |+||++++++|+++|++|+++.|+.+ ...+ ..+ .+.++.+|++|.++++++++
T Consensus 7 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~-~~~~~~~D~~~~~~v~~~~~~~~~~~g 85 (261)
T 2wyu_A 7 SGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALG-GALLFRADVTQDEELDALFAGVKEAFG 85 (261)
T ss_dssp TTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHHHHTT-CCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcC-CcEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 46899999999 99999999999999999999999875 2211 122 47889999999998888776
Q ss_pred CccEEEEcCCc---------h---------------------hhhccccc--CCCEEEEecCcccccCCCCcccccchHH
Q 021854 163 GVRSIICPSEG---------F---------------------ISNAGSLK--GVQHVILLSQLSVYRGSGGIQALMKGNA 210 (306)
Q Consensus 163 ~~d~vi~~~~g---------~---------------------~~~~a~~~--gvkr~V~iSS~~~~~~~~~~~~~~~~~a 210 (306)
++|++||+++. + +.+++... +-++||++||..++.+..+...|..+++
T Consensus 86 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~ 165 (261)
T 2wyu_A 86 GLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKVVPKYNVMAIAKA 165 (261)
T ss_dssp SEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSBCTTCHHHHHHHH
T ss_pred CCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhccCCEEEEEecccccCCCCCchHHHHHHH
Confidence 67999998431 0 01111111 1258999999888766555556654433
Q ss_pred HH--HHHHHHHHHHhcCCCEEEEEcCcccCCCCCCc-c--ee---eecCCCCccccCHHHHHHHHHHHhhCCC--CCCcE
Q 021854 211 RK--LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQ-G--FQ---FEEGCAANGSLSKEDAAFICVEALESIP--QTGLI 280 (306)
Q Consensus 211 ~~--~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~~-~--~~---~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~ 280 (306)
.. +.+.....+...+++++.|+||++........ . .. +........+.+++|+|++++.++.... ..|++
T Consensus 166 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dva~~v~~l~s~~~~~~tG~~ 245 (261)
T 2wyu_A 166 ALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPLRRNITQEEVGNLGLFLLSPLASGITGEV 245 (261)
T ss_dssp HHHHHHHHHHHHHGGGTCEEEEEEECCCCCTGGGGCTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred HHHHHHHHHHHHHhhhCcEEEEEeeCCCcCchhhhccccHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcChhhcCCCCCE
Confidence 21 11111222334699999999998653321110 0 00 0011112346789999999999986533 35889
Q ss_pred EEEecCC
Q 021854 281 FEVVNGE 287 (306)
Q Consensus 281 ~~v~~g~ 287 (306)
+++.+|.
T Consensus 246 ~~vdgG~ 252 (261)
T 2wyu_A 246 VYVDAGY 252 (261)
T ss_dssp EEESTTG
T ss_pred EEECCCc
Confidence 9998874
|
| >3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* | Back alignment and structure |
|---|
Probab=99.67 E-value=1.1e-15 Score=138.35 Aligned_cols=189 Identities=15% Similarity=0.115 Sum_probs=127.7
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhh---hcCCCceeeeccCCCHHHHHHHhc-------CccE
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALR-------GVRS 166 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~---~~~~~v~~v~~D~~d~~~l~~~~~-------~~d~ 166 (306)
..+|+++||||+++||++++++|+++|++|+++.|+.++..+ ..+.++.++.+|++|.++++++++ .+|+
T Consensus 3 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~ 82 (281)
T 3zv4_A 3 LTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAHGGNAVGVVGDVRSLQDQKRAAERCLAAFGKIDT 82 (281)
T ss_dssp TTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTBTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCCCE
Confidence 357999999999999999999999999999999999876433 234578899999999988777664 5699
Q ss_pred EEEcCCc-----h--------------------------hhhc----ccccCCCEEEEecCcccccCCCCcccccchHHH
Q 021854 167 IICPSEG-----F--------------------------ISNA----GSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR 211 (306)
Q Consensus 167 vi~~~~g-----~--------------------------~~~~----a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~ 211 (306)
+||+++- . +.++ +.+.+ .++|++||..++.+......|..+++.
T Consensus 83 lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~asKaa 161 (281)
T 3zv4_A 83 LIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSSR-GSVVFTISNAGFYPNGGGPLYTATKHA 161 (281)
T ss_dssp EECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTSSSSSCHHHHHHHHH
T ss_pred EEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CeEEEEecchhccCCCCCchhHHHHHH
Confidence 9998431 0 0011 12223 699999999988777666667654432
Q ss_pred HH--HHHHHHHHHhcCCCEEEEEcCcccCCCCCCcc-----ee---------eecCCCCccccCHHHHHHHHHHHhhCCC
Q 021854 212 KL--AEQDESMLMASGIPYTIIRTGVLQNTPGGKQG-----FQ---------FEEGCAANGSLSKEDAAFICVEALESIP 275 (306)
Q Consensus 212 ~~--~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~~~-----~~---------~~~g~~~~~~Is~~DVA~~iv~aL~~~~ 275 (306)
.. .+.....+.. .|++..|+||++......... .. +........+.+++|+|.+++.++.++.
T Consensus 162 ~~~l~~~la~e~~~-~Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~fL~s~~~ 240 (281)
T 3zv4_A 162 VVGLVRQMAFELAP-HVRVNGVAPGGMNTDLRGPSSLGLSEQSISSVPLADMLKSVLPIGRMPALEEYTGAYVFFATRGD 240 (281)
T ss_dssp HHHHHHHHHHHHTT-TSEEEEEEECSSCC--CCCTTCC--------CCHHHHHHHTCTTSSCCCGGGGSHHHHHHHSTTT
T ss_pred HHHHHHHHHHHhcC-CCEEEEEECCcCcCCcccccccccccccccchhHHHHHHhcCCCCCCCCHHHHHHHHHHhhcccc
Confidence 21 1111111222 399999999986533211000 00 0011122345688999999999997333
Q ss_pred ---CCCcEEEEecCC
Q 021854 276 ---QTGLIFEVVNGE 287 (306)
Q Consensus 276 ---~~g~~~~v~~g~ 287 (306)
-.|++++|.+|-
T Consensus 241 ~~~itG~~i~vdGG~ 255 (281)
T 3zv4_A 241 SLPATGALLNYDGGM 255 (281)
T ss_dssp STTCSSCEEEESSSG
T ss_pred cccccCcEEEECCCC
Confidence 468999998874
|
| >3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A | Back alignment and structure |
|---|
Probab=99.67 E-value=1.1e-15 Score=137.55 Aligned_cols=192 Identities=10% Similarity=0.017 Sum_probs=125.5
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcch-hh------hhcCCCceeeeccCCCHHHHHHHhc------
Q 021854 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-AM------ESFGTYVESMAGDASNKKFLKTALR------ 162 (306)
Q Consensus 96 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~-~~------~~~~~~v~~v~~D~~d~~~l~~~~~------ 162 (306)
...+|+++||||+|+||++++++|+++|++|+++.|+... .. ...+.++.++.+|++|.++++++++
T Consensus 15 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 94 (270)
T 3is3_A 15 RLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAHF 94 (270)
T ss_dssp CCTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CcCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 3457999999999999999999999999999998776533 11 1234578899999999998887775
Q ss_pred -CccEEEEcCCch--------------------------hhhccccc--CCCEEEEecCcc-cccCCCCcccccchHHHH
Q 021854 163 -GVRSIICPSEGF--------------------------ISNAGSLK--GVQHVILLSQLS-VYRGSGGIQALMKGNARK 212 (306)
Q Consensus 163 -~~d~vi~~~~g~--------------------------~~~~a~~~--gvkr~V~iSS~~-~~~~~~~~~~~~~~~a~~ 212 (306)
.+|++||+++.. +.+++... .-.+||++||.. ...+..+...|..+++..
T Consensus 95 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~asKaa~ 174 (270)
T 3is3_A 95 GHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNTSKDFSVPKHSLYSGSKGAV 174 (270)
T ss_dssp SCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCTTTTTCCCTTCHHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCchhccCCCCCCchhHHHHHHH
Confidence 679999984410 11111111 235999999987 334445555665543321
Q ss_pred --HHHHHHHHHHhcCCCEEEEEcCcccCCCCC---------Ccce-------eeecCCCCccccCHHHHHHHHHHHhhCC
Q 021854 213 --LAEQDESMLMASGIPYTIIRTGVLQNTPGG---------KQGF-------QFEEGCAANGSLSKEDAAFICVEALESI 274 (306)
Q Consensus 213 --~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~---------~~~~-------~~~~g~~~~~~Is~~DVA~~iv~aL~~~ 274 (306)
+.+.....+...+|+++.|+||++...... .... .+........+.+++|||+++++++.+.
T Consensus 175 ~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~L~s~~ 254 (270)
T 3is3_A 175 DSFVRIFSKDCGDKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASPLHRNGWPQDVANVVGFLVSKE 254 (270)
T ss_dssp HHHHHHHHHHHGGGTCEEEEEEECSBCSTTHHHHGGGGSTTGGGSCHHHHHHHHHHHSTTCSCBCHHHHHHHHHHHTSGG
T ss_pred HHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhhhhccccccccchHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCCc
Confidence 112222223447999999999986533210 0000 0001112234567999999999998654
Q ss_pred C--CCCcEEEEecCC
Q 021854 275 P--QTGLIFEVVNGE 287 (306)
Q Consensus 275 ~--~~g~~~~v~~g~ 287 (306)
. -.|++++|.+|-
T Consensus 255 ~~~itG~~i~vdGG~ 269 (270)
T 3is3_A 255 GEWVNGKVLTLDGGA 269 (270)
T ss_dssp GTTCCSCEEEESTTC
T ss_pred cCCccCcEEEeCCCC
Confidence 3 468999998763
|
| >3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=99.67 E-value=3.7e-16 Score=138.31 Aligned_cols=185 Identities=13% Similarity=0.028 Sum_probs=109.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcC-CCceeeeccCCCHHHH---HHH---hcCccEEEEc
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG-TYVESMAGDASNKKFL---KTA---LRGVRSIICP 170 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~-~~v~~v~~D~~d~~~l---~~~---~~~~d~vi~~ 170 (306)
.+++++||||+|+||++++++|++ |++|+++.|+.++..+... .++.++.+|++|.+.. .+. +..+|++||+
T Consensus 4 ~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id~lv~~ 82 (245)
T 3e9n_A 4 KKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALAEIEGVEPIESDIVKEVLEEGGVDKLKNLDHVDTLVHA 82 (245)
T ss_dssp --CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHHTSTTEEEEECCHHHHHHTSSSCGGGTTCSCCSEEEEC
T ss_pred CCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHhhcCCcceecccchHHHHHHHHHHHHhcCCCCEEEEC
Confidence 478999999999999999999987 9999999999877544322 4688899999886442 112 2367999998
Q ss_pred CCch--------------------------hh----hcccccCCCEEEEecCcccccCCCCcccccchHHHHH--HHHHH
Q 021854 171 SEGF--------------------------IS----NAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKL--AEQDE 218 (306)
Q Consensus 171 ~~g~--------------------------~~----~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~~--~~~aE 218 (306)
++.. +. ..+++.+ .++|++||..++.+..+...|..+++... .+...
T Consensus 83 Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la 161 (245)
T 3e9n_A 83 AAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAAS-GCVIYINSGAGNGPHPGNTIYAASKHALRGLADAFR 161 (245)
T ss_dssp C----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEC----------CHHHHHHHHHHHHHHHHHH
T ss_pred CCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEcCcccccCCCCchHHHHHHHHHHHHHHHHH
Confidence 4310 01 1122334 79999999998877666667765443221 11111
Q ss_pred HHHHhcCCCEEEEEcCcccCCCCCCcceeeecCCCCccccCHHHHHHHHHHHhhCCCCCCcEEEEec
Q 021854 219 SMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVVN 285 (306)
Q Consensus 219 ~~l~~sgi~~tiiRPg~l~~~~~~~~~~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~~~g~~~~v~~ 285 (306)
..+...+++++.|+||++....................+++++|+|++++.++..+. .+.++++.-
T Consensus 162 ~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~p~dvA~~i~~l~~~~~-~~~~~~i~~ 227 (245)
T 3e9n_A 162 KEEANNGIRVSTVSPGPTNTPMLQGLMDSQGTNFRPEIYIEPKEIANAIRFVIDAGE-TTQITNVDV 227 (245)
T ss_dssp HHHGGGTCEEEEEEECCC----------------CCGGGSCHHHHHHHHHHHHTSCT-TEEEEEEEE
T ss_pred HHhhhcCeEEEEEecCCccCchhhhhhhhhhcccccccCCCHHHHHHHHHHHHcCCC-ccceeeeEE
Confidence 223347899999999986533211110000111122457899999999999998765 356777664
|
| >3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=99.67 E-value=1.9e-15 Score=134.00 Aligned_cols=191 Identities=17% Similarity=0.058 Sum_probs=127.2
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEE-ecCcchhhh------hcCCCceeeeccCCCHHHHHHHhcC------
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKAL-VKDKRNAME------SFGTYVESMAGDASNKKFLKTALRG------ 163 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l-~R~~~~~~~------~~~~~v~~v~~D~~d~~~l~~~~~~------ 163 (306)
..+|+++||||+++||++++++|+++|++|+++ .|+.++..+ ..+..+.++.+|++|.++++.+++.
T Consensus 5 l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 84 (255)
T 3icc_A 5 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQ 84 (255)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhcCCceEEEecCcCCHHHHHHHHHHHHHHhc
Confidence 357999999999999999999999999999986 455444221 1235678899999998887776643
Q ss_pred -------ccEEEEcCCch--------------------------hhhcccc--cCCCEEEEecCcccccCCCCcccccch
Q 021854 164 -------VRSIICPSEGF--------------------------ISNAGSL--KGVQHVILLSQLSVYRGSGGIQALMKG 208 (306)
Q Consensus 164 -------~d~vi~~~~g~--------------------------~~~~a~~--~gvkr~V~iSS~~~~~~~~~~~~~~~~ 208 (306)
+|++||+++-. +.+++.. .+..+||++||..++.+......|..+
T Consensus 85 ~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~as 164 (255)
T 3icc_A 85 NRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRISLPDFIAYSMT 164 (255)
T ss_dssp HHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGTSCCTTBHHHHHH
T ss_pred ccccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCCCCEEEEeCChhhccCCCCcchhHHh
Confidence 89999984310 1111111 133589999999988777777777654
Q ss_pred HHHH--HHHHHHHHHHhcCCCEEEEEcCcccCCCCCC---cc---eeeecCCCCccccCHHHHHHHHHHHhhCC--CCCC
Q 021854 209 NARK--LAEQDESMLMASGIPYTIIRTGVLQNTPGGK---QG---FQFEEGCAANGSLSKEDAAFICVEALESI--PQTG 278 (306)
Q Consensus 209 ~a~~--~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~---~~---~~~~~g~~~~~~Is~~DVA~~iv~aL~~~--~~~g 278 (306)
++.. +.+.....+...+++++.|+||++....... .. ...........+.+++|+|++++.++... ...|
T Consensus 165 Kaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~tG 244 (255)
T 3icc_A 165 KGAINTMTFTLAKQLGARGITVNAILPGFVKTDMNAELLSDPMMKQYATTISAFNRLGEVEDIADTAAFLASPDSRWVTG 244 (255)
T ss_dssp HHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCSSSTTTTTSHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred HHHHHHHHHHHHHHHHhcCeEEEEEEEeeecccchhhhcccHHHHHhhhccCCcCCCCCHHHHHHHHHHHhCcccCCccC
Confidence 4322 1122222234579999999999965432211 00 00111222244678999999999988643 3568
Q ss_pred cEEEEecCC
Q 021854 279 LIFEVVNGE 287 (306)
Q Consensus 279 ~~~~v~~g~ 287 (306)
+++++.+|.
T Consensus 245 ~~i~vdgG~ 253 (255)
T 3icc_A 245 QLIDVSGGS 253 (255)
T ss_dssp CEEEESSST
T ss_pred CEEEecCCe
Confidence 999998774
|
| >1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.66 E-value=2.2e-16 Score=139.02 Aligned_cols=182 Identities=9% Similarity=0.066 Sum_probs=121.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhc---------CccEEE
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR---------GVRSII 168 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~---------~~d~vi 168 (306)
++++++||||+|+||++++++|+++|++|+++.|+.++.. ....++.+|++|.++++++++ ++|++|
T Consensus 2 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~id~lv 77 (236)
T 1ooe_A 2 SSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA----DSNILVDGNKNWTEQEQSILEQTASSLQGSQVDGVF 77 (236)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS----SEEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCccccc----cccEEEeCCCCCHHHHHHHHHHHHHHhCCCCCCEEE
Confidence 3689999999999999999999999999999999986643 235678899999988877665 789999
Q ss_pred EcCCc-------h--------------------hhhcccc--cCCCEEEEecCcccccCCCCcccccchHHHHH--HHHH
Q 021854 169 CPSEG-------F--------------------ISNAGSL--KGVQHVILLSQLSVYRGSGGIQALMKGNARKL--AEQD 217 (306)
Q Consensus 169 ~~~~g-------~--------------------~~~~a~~--~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~~--~~~a 217 (306)
|+++. . +.+++.. ....+||++||..++.+..+...|..+++... .+..
T Consensus 78 ~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~l 157 (236)
T 1ooe_A 78 CVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGPTPSMIGYGMAKAAVHHLTSSL 157 (236)
T ss_dssp ECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTTBHHHHHHHHHHHHHHHHH
T ss_pred ECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEECchhhccCCCCcHHHHHHHHHHHHHHHHH
Confidence 98431 0 0111111 01258999999988876666666654432211 1111
Q ss_pred HHHHH--hcCCCEEEEEcCcccCCCCCCcceeeecCCCCccccCHHHHHHHHHHHhhCC---CCCCcEEEEecCC
Q 021854 218 ESMLM--ASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESI---PQTGLIFEVVNGE 287 (306)
Q Consensus 218 E~~l~--~sgi~~tiiRPg~l~~~~~~~~~~~~~~g~~~~~~Is~~DVA~~iv~aL~~~---~~~g~~~~v~~g~ 287 (306)
...+. ..+++++.|+||++...... . . . ........++++|+|++++..|..+ ...|+.+.+.++.
T Consensus 158 a~e~~~~~~gi~v~~v~Pg~v~t~~~~-~-~-~-~~~~~~~~~~~~dvA~~i~~~l~s~~~~~~~G~~~~v~gg~ 228 (236)
T 1ooe_A 158 AAKDSGLPDNSAVLTIMPVTLDTPMNR-K-W-M-PNADHSSWTPLSFISEHLLKWTTETSSRPSSGALLKITTEN 228 (236)
T ss_dssp HSTTSSCCTTCEEEEEEESCBCCHHHH-H-H-S-TTCCGGGCBCHHHHHHHHHHHHHCGGGCCCTTCEEEEEEET
T ss_pred HHHhcccCCCeEEEEEecCcccCcchh-h-c-C-CCccccccCCHHHHHHHHHHHHcCCCcccccccEEEEecCC
Confidence 11122 34699999999986432110 0 0 0 0111234678999999999777443 2458889888754
|
| >1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* | Back alignment and structure |
|---|
Probab=99.66 E-value=2.1e-15 Score=134.46 Aligned_cols=174 Identities=16% Similarity=0.085 Sum_probs=116.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHH-CCCeEEEEecCcchhhhh------cCCCceeeeccCCCHHHHHHHhc-------C
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIV-KRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------G 163 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~-~g~~V~~l~R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~~~-------~ 163 (306)
.+++|+||||+|+||++++++|++ .|++|+++.|+.++..+. .+.++.++.+|++|.++++++++ +
T Consensus 3 ~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~ 82 (276)
T 1wma_A 3 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGG 82 (276)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 468999999999999999999999 999999999987653221 13568899999999999888776 7
Q ss_pred ccEEEEcCCch--------------------------hhhccccc--CCCEEEEecCcccccC--C--------------
Q 021854 164 VRSIICPSEGF--------------------------ISNAGSLK--GVQHVILLSQLSVYRG--S-------------- 199 (306)
Q Consensus 164 ~d~vi~~~~g~--------------------------~~~~a~~~--gvkr~V~iSS~~~~~~--~-------------- 199 (306)
+|+|||+++.. +.+++... ..++||++||..++.+ .
T Consensus 83 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~ 162 (276)
T 1wma_A 83 LDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSETI 162 (276)
T ss_dssp EEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCHHHHHHHHCSSC
T ss_pred CCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEECChhhhcccccCChhHHhhcccccc
Confidence 89999984310 11112111 1259999999876532 0
Q ss_pred -------------------------CCcccccchHHHH--HHHHHHHHHHh----cCCCEEEEEcCcccCCCCCCcceee
Q 021854 200 -------------------------GGIQALMKGNARK--LAEQDESMLMA----SGIPYTIIRTGVLQNTPGGKQGFQF 248 (306)
Q Consensus 200 -------------------------~~~~~~~~~~a~~--~~~~aE~~l~~----sgi~~tiiRPg~l~~~~~~~~~~~~ 248 (306)
.+...|..+++.. +.+.....+.. .+++++.|+||++.......
T Consensus 163 ~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~~~i~v~~v~PG~v~t~~~~~----- 237 (276)
T 1wma_A 163 TEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGP----- 237 (276)
T ss_dssp CHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTCT-----
T ss_pred chhhhhhhhhhhhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHhhcccCCCceEEEEecCCccccCcCCc-----
Confidence 0113343332211 11111112223 58999999999875433211
Q ss_pred ecCCCCccccCHHHHHHHHHHHhhCCC----CCCcEEE
Q 021854 249 EEGCAANGSLSKEDAAFICVEALESIP----QTGLIFE 282 (306)
Q Consensus 249 ~~g~~~~~~Is~~DVA~~iv~aL~~~~----~~g~~~~ 282 (306)
..+.+++|+|+.++.++..+. ..|+.+.
T Consensus 238 ------~~~~~~~~~a~~~~~l~~~~~~~~~~~G~~~~ 269 (276)
T 1wma_A 238 ------KATKSPEEGAETPVYLALLPPDAEGPHGQFVS 269 (276)
T ss_dssp ------TCSBCHHHHTHHHHHHHSCCTTCCCCCSCEEE
T ss_pred ------cccCChhHhhhhHhhhhcCcccccccCceEec
Confidence 246899999999999997552 3455554
|
| >3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.66 E-value=2.2e-15 Score=134.72 Aligned_cols=194 Identities=12% Similarity=0.022 Sum_probs=128.9
Q ss_pred CccCCCeEEEEcCC--ChHHHHHHHHHHHCCCeEEEEecCcchh---hhh--cCCCceeeeccCCCHHHHHHHhc-----
Q 021854 95 PEEARDAVLVTDGD--SDIGQMVILSLIVKRTRIKALVKDKRNA---MES--FGTYVESMAGDASNKKFLKTALR----- 162 (306)
Q Consensus 95 ~~~~~~~ilVtGat--G~iG~~l~~~L~~~g~~V~~l~R~~~~~---~~~--~~~~v~~v~~D~~d~~~l~~~~~----- 162 (306)
....+|+|+||||+ |+||++++++|+++|++|+++.|+.+.. .+. ....+.++.+|++|.++++++++
T Consensus 10 ~~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 89 (271)
T 3ek2_A 10 GFLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSELVFPCDVADDAQIDALFASLKTH 89 (271)
T ss_dssp CTTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred cccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHcCCcEEEECCCCCHHHHHHHHHHHHHH
Confidence 34568999999999 9999999999999999999999985431 111 12358899999999998888775
Q ss_pred --CccEEEEcCCc-------------h------------------hhhcccc--cCCCEEEEecCcccccCCCCcccccc
Q 021854 163 --GVRSIICPSEG-------------F------------------ISNAGSL--KGVQHVILLSQLSVYRGSGGIQALMK 207 (306)
Q Consensus 163 --~~d~vi~~~~g-------------~------------------~~~~a~~--~gvkr~V~iSS~~~~~~~~~~~~~~~ 207 (306)
.+|++||+++. . +.+++.. .+..+||++||..++.+..+...|..
T Consensus 90 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a 169 (271)
T 3ek2_A 90 WDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAERAIPNYNTMGL 169 (271)
T ss_dssp CSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTTTTHHHH
T ss_pred cCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEeccccccCCCCccchhH
Confidence 56999998431 0 0011111 12358999999988877666666755
Q ss_pred hHHHH--HHHHHHHHHHhcCCCEEEEEcCcccCCCCCCcce------eeecCCCCccccCHHHHHHHHHHHhhCC--CCC
Q 021854 208 GNARK--LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGF------QFEEGCAANGSLSKEDAAFICVEALESI--PQT 277 (306)
Q Consensus 208 ~~a~~--~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~~~~------~~~~g~~~~~~Is~~DVA~~iv~aL~~~--~~~ 277 (306)
+++.. +.+.....+...+++++.|+||++.......... .+........+.+++|+|++++.++.+. ...
T Consensus 170 sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~pedva~~i~~l~s~~~~~~t 249 (271)
T 3ek2_A 170 AKAALEASVRYLAVSLGAKGVRVNAISAGPIKTLAASGIKSFGKILDFVESNSPLKRNVTIEQVGNAGAFLLSDLASGVT 249 (271)
T ss_dssp HHHHHHHHHHHHHHHHHTTTCEEEEEEECCC-----CCCHHHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGGTTCC
T ss_pred HHHHHHHHHHHHHHHHHhcCcEEEEEecCcccchhhhcccchHHHHHHHHhcCCcCCCCCHHHHHHHHHHHcCcccCCee
Confidence 43321 1122222344579999999999865432211100 0001122234678999999999999753 356
Q ss_pred CcEEEEecCCc
Q 021854 278 GLIFEVVNGEE 288 (306)
Q Consensus 278 g~~~~v~~g~~ 288 (306)
|+++++.+|..
T Consensus 250 G~~i~vdgG~~ 260 (271)
T 3ek2_A 250 AEVMHVDSGFN 260 (271)
T ss_dssp SEEEEESTTGG
T ss_pred eeEEEECCCee
Confidence 89999998763
|
| >3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.66 E-value=1.6e-15 Score=141.74 Aligned_cols=186 Identities=12% Similarity=0.043 Sum_probs=124.7
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhh-------------hhcCCCceeeeccCCCHHHHHHHhc
Q 021854 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM-------------ESFGTYVESMAGDASNKKFLKTALR 162 (306)
Q Consensus 96 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~-------------~~~~~~v~~v~~D~~d~~~l~~~~~ 162 (306)
...+++|+||||+++||++++++|+++|++|+++.|+.++.. ...+.++.++.+|++|.++++++++
T Consensus 42 ~l~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~ 121 (346)
T 3kvo_A 42 RLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAAVE 121 (346)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHH
T ss_pred CCCCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHH
Confidence 345799999999999999999999999999999999886421 1124578889999999998887775
Q ss_pred -------CccEEEEcCCch--------------------------hh----hcccccCCCEEEEecCcccccC--CCCcc
Q 021854 163 -------GVRSIICPSEGF--------------------------IS----NAGSLKGVQHVILLSQLSVYRG--SGGIQ 203 (306)
Q Consensus 163 -------~~d~vi~~~~g~--------------------------~~----~~a~~~gvkr~V~iSS~~~~~~--~~~~~ 203 (306)
++|++||+++.. +. ..+++.+..+||++||..++.+ ..+..
T Consensus 122 ~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~~~~~~~~~~~~~ 201 (346)
T 3kvo_A 122 KAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNLNPVWFKQHC 201 (346)
T ss_dssp HHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSSCEEEEECCCCCCCGGGTSSSH
T ss_pred HHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCCEEEEECCHHHcCCCCCCCch
Confidence 789999984410 11 1234567789999999887765 34445
Q ss_pred cccchHHHHH--HHHHHHHHHhcCCCEEEEEcCcccCCCCCCcceeeecCCCCccccCHHHHHHHHHHHhhCCC-CCCcE
Q 021854 204 ALMKGNARKL--AEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIP-QTGLI 280 (306)
Q Consensus 204 ~~~~~~a~~~--~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~~~~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~-~~g~~ 280 (306)
.|..+++... .+.....+. .+|++..|.||+..+.+... .+..........+++|+|++++.++.+.. ..|+.
T Consensus 202 ~Y~aSKaal~~l~~~la~e~~-~gIrvn~v~PG~~i~T~~~~---~~~~~~~~~r~~~pedvA~~v~~L~s~~~~itG~~ 277 (346)
T 3kvo_A 202 AYTIAKYGMSMYVLGMAEEFK-GEIAVNALWPKTAIHTAAMD---MLGGPGIESQCRKVDIIADAAYSIFQKPKSFTGNF 277 (346)
T ss_dssp HHHHHHHHHHHHHHHHHHHTT-TTCEEEEEECSBCBCCHHHH---HHCC--CGGGCBCTHHHHHHHHHHHTSCTTCCSCE
T ss_pred HHHHHHHHHHHHHHHHHHHhc-CCcEEEEEeCCCccccHHHH---hhccccccccCCCHHHHHHHHHHHHhcCCCCCceE
Confidence 5654433211 111111122 68999999999633322100 00011112346788999999999998733 35676
Q ss_pred EEEecC
Q 021854 281 FEVVNG 286 (306)
Q Consensus 281 ~~v~~g 286 (306)
+ +.++
T Consensus 278 i-vdgg 282 (346)
T 3kvo_A 278 V-IDEN 282 (346)
T ss_dssp E-EHHH
T ss_pred E-ECCc
Confidence 6 6544
|
| >1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* | Back alignment and structure |
|---|
Probab=99.66 E-value=3.8e-16 Score=137.97 Aligned_cols=182 Identities=13% Similarity=0.080 Sum_probs=122.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhc---------CccEEE
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR---------GVRSII 168 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~---------~~d~vi 168 (306)
++|+|+||||+|+||++++++|+++|++|+++.|+.++.. ....++.+|++|.++++++++ ++|++|
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~----~~~~~~~~D~~~~~~v~~~~~~~~~~~~~g~iD~lv 81 (241)
T 1dhr_A 6 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA----SASVIVKMTDSFTEQADQVTAEVGKLLGDQKVDAIL 81 (241)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS----SEEEECCCCSCHHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhcc----CCcEEEEcCCCCHHHHHHHHHHHHHHhCCCCCCEEE
Confidence 4689999999999999999999999999999999986643 235678899999988877765 689999
Q ss_pred EcCCc-------h--------------------hhhcccc--cCCCEEEEecCcccccCCCCcccccchHHHHH--HHHH
Q 021854 169 CPSEG-------F--------------------ISNAGSL--KGVQHVILLSQLSVYRGSGGIQALMKGNARKL--AEQD 217 (306)
Q Consensus 169 ~~~~g-------~--------------------~~~~a~~--~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~~--~~~a 217 (306)
|+++. . +.+++.. ..-++||++||..++.+..+...|..+++... .+..
T Consensus 82 ~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~l 161 (241)
T 1dhr_A 82 CVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDGTPGMIGYGMAKGAVHQLCQSL 161 (241)
T ss_dssp ECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTTBHHHHHHHHHHHHHHHHH
T ss_pred EcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCEEEEECCHHHccCCCCchHHHHHHHHHHHHHHHH
Confidence 98431 0 0011111 01269999999988876666666654332211 1111
Q ss_pred HHHHH--hcCCCEEEEEcCcccCCCCCCcceeeecCCCCccccCHHHHHHHHHHHhhCCC--CCCcEEEEecCC
Q 021854 218 ESMLM--ASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVNGE 287 (306)
Q Consensus 218 E~~l~--~sgi~~tiiRPg~l~~~~~~~~~~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~~~v~~g~ 287 (306)
...+. ..+++++.|+||++....... . . ........++++|+|++++.++.... ..|+.+.+.++.
T Consensus 162 a~e~~~~~~gi~v~~v~PG~v~T~~~~~--~-~-~~~~~~~~~~~~~vA~~v~~l~~~~~~~~~G~~~~v~g~~ 231 (241)
T 1dhr_A 162 AGKNSGMPSGAAAIAVLPVTLDTPMNRK--S-M-PEADFSSWTPLEFLVETFHDWITGNKRPNSGSLIQVVTTD 231 (241)
T ss_dssp TSTTSSCCTTCEEEEEEESCEECHHHHH--H-S-TTSCGGGSEEHHHHHHHHHHHHTTTTCCCTTCEEEEEEET
T ss_pred HHHhccCCCCeEEEEEecCcccCccccc--c-C-cchhhccCCCHHHHHHHHHHHhcCCCcCccceEEEEeCCC
Confidence 11122 357999999999854221100 0 0 00112346788999999999997643 358889888754
|
| >2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.66 E-value=2.1e-15 Score=134.67 Aligned_cols=186 Identities=13% Similarity=0.093 Sum_probs=119.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh------cCCCceeeeccCCCHHHHHHHhc--------C
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR--------G 163 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~~~--------~ 163 (306)
.+++++||||+|+||++++++|+++|++|+++.|+.++..+. .+.++.++.+|++|.++++++++ .
T Consensus 4 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g~ 83 (260)
T 2qq5_A 4 NGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDREQQGR 83 (260)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHHHTTC
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence 478999999999999999999999999999999998663321 14468889999999988776553 4
Q ss_pred ccEEEEcCC-ch------------------------------------hhhcccccCCCEEEEecCcccccCCCCccccc
Q 021854 164 VRSIICPSE-GF------------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALM 206 (306)
Q Consensus 164 ~d~vi~~~~-g~------------------------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~ 206 (306)
+|++||+++ +. ....+.+.+.++||++||..++.+. +...|.
T Consensus 84 id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-~~~~Y~ 162 (260)
T 2qq5_A 84 LDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAGQGLIVVISSPGSLQYM-FNVPYG 162 (260)
T ss_dssp CCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGTCCEEEEECCGGGTSCC-SSHHHH
T ss_pred ceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcCCcEEEEEcChhhcCCC-CCCchH
Confidence 699999862 11 0011234567899999998876543 234454
Q ss_pred chHHHH--HHHHHHHHHHhcCCCEEEEEcCcccCCCCCC----ccee----ee-cCCCCccccCHHHHHHHHHHHhhCCC
Q 021854 207 KGNARK--LAEQDESMLMASGIPYTIIRTGVLQNTPGGK----QGFQ----FE-EGCAANGSLSKEDAAFICVEALESIP 275 (306)
Q Consensus 207 ~~~a~~--~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~----~~~~----~~-~g~~~~~~Is~~DVA~~iv~aL~~~~ 275 (306)
.+++.. +.+.....+...++++++|+||++....... .... .. .........+++|+|++++.++.++.
T Consensus 163 asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~va~~v~~l~s~~~ 242 (260)
T 2qq5_A 163 VGKAACDKLAADCAHELRRHGVSCVSLWPGIVQTELLKEHMAKEEVLQDPVLKQFKSAFSSAETTELSGKCVVALATDPN 242 (260)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTCEEEEEECCCSCTTTC----------------------CHHHHHHHHHHHHHHHHTCTT
T ss_pred HHHHHHHHHHHHHHHHhccCCeEEEEEecCccccHHHHHhhccccccchhHHHHHHhhhccCCCHHHHHHHHHHHhcCcc
Confidence 433221 1111222234579999999999865332111 0000 00 00001112468999999999998764
Q ss_pred C---CCcEEEEe
Q 021854 276 Q---TGLIFEVV 284 (306)
Q Consensus 276 ~---~g~~~~v~ 284 (306)
. .|+.+.+.
T Consensus 243 ~~~itG~~i~~~ 254 (260)
T 2qq5_A 243 ILSLSGKVLPSC 254 (260)
T ss_dssp GGGGTTCEEEHH
T ss_pred cccccceeechh
Confidence 2 56666654
|
| >1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* | Back alignment and structure |
|---|
Probab=99.66 E-value=1.6e-15 Score=137.99 Aligned_cols=190 Identities=11% Similarity=0.005 Sum_probs=130.2
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEe-cCcchhhh-------hcCCCceeeeccCCCHH-------------
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALV-KDKRNAME-------SFGTYVESMAGDASNKK------------- 155 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~-R~~~~~~~-------~~~~~v~~v~~D~~d~~------------- 155 (306)
..+|+++||||+|+||++++++|+++|++|+++. |+.++..+ ..+.++.++.+|++|.+
T Consensus 7 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 86 (291)
T 1e7w_A 7 PTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPV 86 (291)
T ss_dssp -CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCB
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhcCCeeEEEEeecCCccccccccccccccc
Confidence 3578999999999999999999999999999999 98765322 22457889999999988
Q ss_pred ----HHHHHhc-------CccEEEEcCCc------------------------h----------------hhh----ccc
Q 021854 156 ----FLKTALR-------GVRSIICPSEG------------------------F----------------ISN----AGS 180 (306)
Q Consensus 156 ----~l~~~~~-------~~d~vi~~~~g------------------------~----------------~~~----~a~ 180 (306)
+++++++ .+|++||+++. . +.+ .+.
T Consensus 87 ~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~ 166 (291)
T 1e7w_A 87 TLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVA 166 (291)
T ss_dssp CHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 8877765 78999998431 0 001 122
Q ss_pred ccC------CCEEEEecCcccccCCCCcccccchHHHH--HHHHHHHHHHhcCCCEEEEEcCcccCCCCCCccee---ee
Q 021854 181 LKG------VQHVILLSQLSVYRGSGGIQALMKGNARK--LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQ---FE 249 (306)
Q Consensus 181 ~~g------vkr~V~iSS~~~~~~~~~~~~~~~~~a~~--~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~~~~~---~~ 249 (306)
+.+ .++||++||..++.+..+...|..+++.. +.+.....+...+|+++.|+||++.... ...... +.
T Consensus 167 ~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~-~~~~~~~~~~~ 245 (291)
T 1e7w_A 167 GTPAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD-DMPPAVWEGHR 245 (291)
T ss_dssp TSCGGGSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGG-GSCHHHHHHHH
T ss_pred hcCCCCCCCCcEEEEEechhhcCCCCCCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCccCCc-cCCHHHHHHHH
Confidence 334 57999999998887766666776544322 1222223344579999999999864332 100000 00
Q ss_pred cCCCCc-cccCHHHHHHHHHHHhhCCC--CCCcEEEEecCC
Q 021854 250 EGCAAN-GSLSKEDAAFICVEALESIP--QTGLIFEVVNGE 287 (306)
Q Consensus 250 ~g~~~~-~~Is~~DVA~~iv~aL~~~~--~~g~~~~v~~g~ 287 (306)
...... .+.+++|+|+++++++.... ..|+.+.+.+|.
T Consensus 246 ~~~p~~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~ 286 (291)
T 1e7w_A 246 SKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGY 286 (291)
T ss_dssp TTCTTTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred hhCCCCCCCCCHHHHHHHHHHHhCCcccCccCcEEEECCCc
Confidence 111112 46789999999999997532 468899988764
|
| >2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A* | Back alignment and structure |
|---|
Probab=99.65 E-value=2.1e-15 Score=135.81 Aligned_cols=189 Identities=13% Similarity=0.036 Sum_probs=125.6
Q ss_pred CCCeEEEEcCC--ChHHHHHHHHHHHCCCeEEEEecCcc---hhhhh---cCCCceeeeccCCCHHHHHHHhc-------
Q 021854 98 ARDAVLVTDGD--SDIGQMVILSLIVKRTRIKALVKDKR---NAMES---FGTYVESMAGDASNKKFLKTALR------- 162 (306)
Q Consensus 98 ~~~~ilVtGat--G~iG~~l~~~L~~~g~~V~~l~R~~~---~~~~~---~~~~v~~v~~D~~d~~~l~~~~~------- 162 (306)
.+++++||||+ |+||++++++|+++|++|+++.|+.+ ...+. .+ .+.++.+|++|.++++++++
T Consensus 5 ~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~-~~~~~~~D~~~~~~v~~~~~~~~~~~g 83 (275)
T 2pd4_A 5 KGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELN-SPYVYELDVSKEEHFKSLYNSVKKDLG 83 (275)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTT-CCCEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-CcEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 46899999999 99999999999999999999999875 22111 22 47889999999998887765
Q ss_pred CccEEEEcCCc---------h---------------------hhhccccc--CCCEEEEecCcccccCCCCcccccchHH
Q 021854 163 GVRSIICPSEG---------F---------------------ISNAGSLK--GVQHVILLSQLSVYRGSGGIQALMKGNA 210 (306)
Q Consensus 163 ~~d~vi~~~~g---------~---------------------~~~~a~~~--gvkr~V~iSS~~~~~~~~~~~~~~~~~a 210 (306)
.+|++||+++- + +.+++... +-.+||++||..+..+..+...|..+++
T Consensus 84 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~ 163 (275)
T 2pd4_A 84 SLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKYMAHYNVMGLAKA 163 (275)
T ss_dssp CEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTTCHHHHHHHH
T ss_pred CCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEecchhcCCCCCchhhHHHHH
Confidence 67999998431 0 01111111 1269999999888766555556655433
Q ss_pred HH--HHHHHHHHHHhcCCCEEEEEcCcccCCCCCCc-c--ee---eecCCCCccccCHHHHHHHHHHHhhCCC--CCCcE
Q 021854 211 RK--LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQ-G--FQ---FEEGCAANGSLSKEDAAFICVEALESIP--QTGLI 280 (306)
Q Consensus 211 ~~--~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~~-~--~~---~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~ 280 (306)
.. +.+.....+...+++++.|+||++........ . .. +........+.+++|+|++++.++.... ..|+.
T Consensus 164 a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dva~~~~~l~s~~~~~~tG~~ 243 (275)
T 2pd4_A 164 ALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADFRMILKWNEINAPLRKNVSLEEVGNAGMYLLSSLSSGVSGEV 243 (275)
T ss_dssp HHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred HHHHHHHHHHHHhhhcCeEEEEEeeCccccchhhhccccHHHHHHHHhcCCcCCCCCHHHHHHHHHHHhCccccCCCCCE
Confidence 22 11222223445699999999998653321110 0 00 0001112335789999999999997532 46888
Q ss_pred EEEecCC
Q 021854 281 FEVVNGE 287 (306)
Q Consensus 281 ~~v~~g~ 287 (306)
+.+.+|.
T Consensus 244 ~~vdgg~ 250 (275)
T 2pd4_A 244 HFVDAGY 250 (275)
T ss_dssp EEESTTG
T ss_pred EEECCCc
Confidence 9988764
|
| >1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A* | Back alignment and structure |
|---|
Probab=99.65 E-value=1.2e-15 Score=136.58 Aligned_cols=190 Identities=12% Similarity=0.034 Sum_probs=124.0
Q ss_pred CCCeEEEEcCC--ChHHHHHHHHHHHCCCeEEEEecCcc---hhhhh--cCCCceeeeccCCCHHHHHHHhc-------C
Q 021854 98 ARDAVLVTDGD--SDIGQMVILSLIVKRTRIKALVKDKR---NAMES--FGTYVESMAGDASNKKFLKTALR-------G 163 (306)
Q Consensus 98 ~~~~ilVtGat--G~iG~~l~~~L~~~g~~V~~l~R~~~---~~~~~--~~~~v~~v~~D~~d~~~l~~~~~-------~ 163 (306)
.+++++||||+ |+||++++++|+++|++|+++.|+.. ...+. ......++.+|++|.++++++++ +
T Consensus 8 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 87 (265)
T 1qsg_A 8 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWPK 87 (265)
T ss_dssp TTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCSS
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHHhcCCcEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 46899999999 99999999999999999999999872 11111 11235788999999999888775 6
Q ss_pred ccEEEEcCCc--------hhh-----------------------hccccc--CCCEEEEecCcccccCCCCcccccchHH
Q 021854 164 VRSIICPSEG--------FIS-----------------------NAGSLK--GVQHVILLSQLSVYRGSGGIQALMKGNA 210 (306)
Q Consensus 164 ~d~vi~~~~g--------~~~-----------------------~~a~~~--gvkr~V~iSS~~~~~~~~~~~~~~~~~a 210 (306)
+|++||+++- .+. +++... +-++||++||..++.+..+...|..+++
T Consensus 88 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~ 167 (265)
T 1qsg_A 88 FDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPNYNVMGLAKA 167 (265)
T ss_dssp EEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTTTTHHHHHHH
T ss_pred CCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEcchhhccCCCCchHHHHHHH
Confidence 7999998431 000 111111 1258999999888766555556654433
Q ss_pred HHH--HHHHHHHHHhcCCCEEEEEcCcccCCCCCCc-c--ee---eecCCCCccccCHHHHHHHHHHHhhCCC--CCCcE
Q 021854 211 RKL--AEQDESMLMASGIPYTIIRTGVLQNTPGGKQ-G--FQ---FEEGCAANGSLSKEDAAFICVEALESIP--QTGLI 280 (306)
Q Consensus 211 ~~~--~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~~-~--~~---~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~ 280 (306)
... .+.....+...+++++.|+||++........ . .. +........+.+++|+|++++.++.++. ..|+.
T Consensus 168 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dva~~v~~l~s~~~~~~tG~~ 247 (265)
T 1qsg_A 168 SLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAAFLCSDLSAGISGEV 247 (265)
T ss_dssp HHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHTSGGGTTCCSCE
T ss_pred HHHHHHHHHHHHhhhcCeEEEEEEeCCCccchhhcccccHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCchhcCccCCE
Confidence 211 1111122334689999999998653321110 0 00 0011112346799999999999987543 35889
Q ss_pred EEEecCC
Q 021854 281 FEVVNGE 287 (306)
Q Consensus 281 ~~v~~g~ 287 (306)
+++.+|.
T Consensus 248 ~~vdgG~ 254 (265)
T 1qsg_A 248 VHVDGGF 254 (265)
T ss_dssp EEESTTG
T ss_pred EEECCCc
Confidence 9998874
|
| >3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=99.65 E-value=1.7e-15 Score=132.20 Aligned_cols=175 Identities=16% Similarity=0.142 Sum_probs=119.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhc---CccEEEEcCCch
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR---GVRSIICPSEGF 174 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~---~~d~vi~~~~g~ 174 (306)
.+|+++||||+|+||++++++|+++|++|+++.|+.+ +|++|.++++++++ .+|++||+++..
T Consensus 5 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~--------------~D~~~~~~v~~~~~~~g~id~lv~nAg~~ 70 (223)
T 3uce_A 5 DKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG--------------LDISDEKSVYHYFETIGAFDHLIVTAGSY 70 (223)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT--------------CCTTCHHHHHHHHHHHCSEEEEEECCCCC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc--------------cCCCCHHHHHHHHHHhCCCCEEEECCCCC
Confidence 4689999999999999999999999999999998874 89999999888775 679999984311
Q ss_pred ---------------------------hhhcccc--cCCCEEEEecCcccccCCCCcccccchHHHHHHHHHHHHHHh-c
Q 021854 175 ---------------------------ISNAGSL--KGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMA-S 224 (306)
Q Consensus 175 ---------------------------~~~~a~~--~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~~~~~aE~~l~~-s 224 (306)
+.+++.. .+-.+||++||..++.+..+...|..+++.... .++.+-++ .
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~asK~a~~~-~~~~la~e~~ 149 (223)
T 3uce_A 71 APAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGMLSRKVVANTYVKAAINAAIEA-TTKVLAKELA 149 (223)
T ss_dssp CCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCGGGTSCCTTCHHHHHHHHHHHH-HHHHHHHHHT
T ss_pred CCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecchhhccCCCCchHHHHHHHHHHH-HHHHHHHhhc
Confidence 1111111 112589999999988776666667554332111 11111112 2
Q ss_pred CCCEEEEEcCcccCCCCCCcce--------eeecCCCCccccCHHHHHHHHHHHhhCCCCCCcEEEEecCC
Q 021854 225 GIPYTIIRTGVLQNTPGGKQGF--------QFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVVNGE 287 (306)
Q Consensus 225 gi~~tiiRPg~l~~~~~~~~~~--------~~~~g~~~~~~Is~~DVA~~iv~aL~~~~~~g~~~~v~~g~ 287 (306)
.++++.|+||++.......... .+........+.+++|+|++++.++..+...|+++++.+|.
T Consensus 150 ~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~~~~~~tG~~i~vdgG~ 220 (223)
T 3uce_A 150 PIRVNAISPGLTKTEAYKGMNADDRDAMYQRTQSHLPVGKVGEASDIAMAYLFAIQNSYMTGTVIDVDGGA 220 (223)
T ss_dssp TSEEEEEEECSBCSGGGTTSCHHHHHHHHHHHHHHSTTCSCBCHHHHHHHHHHHHHCTTCCSCEEEESTTG
T ss_pred CcEEEEEEeCCCcchhhhhcchhhHHHHHHHHhhcCCCCCccCHHHHHHHHHHHccCCCCCCcEEEecCCe
Confidence 3999999999865322111000 00111222456789999999999998766789999998774
|
| >2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A* | Back alignment and structure |
|---|
Probab=99.64 E-value=5.8e-15 Score=143.88 Aligned_cols=177 Identities=16% Similarity=0.192 Sum_probs=123.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCe-EEEEecCcch---hh------hhcCCCceeeeccCCCHHHHHHHhcCc---
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTR-IKALVKDKRN---AM------ESFGTYVESMAGDASNKKFLKTALRGV--- 164 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~-V~~l~R~~~~---~~------~~~~~~v~~v~~D~~d~~~l~~~~~~~--- 164 (306)
.+++||||||+|+||++++++|+++|++ |++++|+... .. +..+.++.++.+|++|.+++.++++.+
T Consensus 225 ~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~i~~~ 304 (486)
T 2fr1_A 225 PTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGDD 304 (486)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTT
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHHHHHhc
Confidence 4689999999999999999999999995 9999998742 11 123457889999999999999998765
Q ss_pred ---cEEEEcCCc----h----------------------hhhcccccCCCEEEEecCcccccCCCCcccccchHHHHHHH
Q 021854 165 ---RSIICPSEG----F----------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAE 215 (306)
Q Consensus 165 ---d~vi~~~~g----~----------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~~~~ 215 (306)
|+|||+++- . +.+++...+.++||++||..+..+..+...|..+++. ..
T Consensus 305 g~ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~V~~SS~a~~~g~~g~~~Yaaaka~--l~ 382 (486)
T 2fr1_A 305 VPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELDLTAFVLFSSFASAFGAPGLGGYAPGNAY--LD 382 (486)
T ss_dssp SCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSCCSEEEEEEEHHHHTCCTTCTTTHHHHHH--HH
T ss_pred CCCcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCcCCCCEEEEEcChHhcCCCCCCHHHHHHHHH--HH
Confidence 999998431 0 2234555688999999998877666666677554332 22
Q ss_pred HHHHHHHhcCCCEEEEEcCcccCCCCCCcceeeecCCCCccccCHHHHHHHHHHHhhCCCC
Q 021854 216 QDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQ 276 (306)
Q Consensus 216 ~aE~~l~~sgi~~tiiRPg~l~~~~~~~~~~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~~ 276 (306)
.....++..|+++++|+||.+....-......-.........++.+|+++++..++..+..
T Consensus 383 ~la~~~~~~gi~v~~i~pG~~~~~gm~~~~~~~~~~~~g~~~i~~e~~a~~l~~~l~~~~~ 443 (486)
T 2fr1_A 383 GLAQQRRSDGLPATAVAWGTWAGSGMAEGPVADRFRRHGVIEMPPETACRALQNALDRAEV 443 (486)
T ss_dssp HHHHHHHHTTCCCEEEEECCBC------------CTTTTEECBCHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHhcCCeEEEEECCeeCCCcccchhHHHHHHhcCCCCCCHHHHHHHHHHHHhCCCC
Confidence 2233456789999999999865331111100000111224579999999999999986543
|
| >4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.64 E-value=3.3e-15 Score=135.05 Aligned_cols=189 Identities=15% Similarity=0.084 Sum_probs=130.5
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhh---hcCCCceeeeccCCCHHHHHHHhc-------CccE
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALR-------GVRS 166 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~---~~~~~v~~v~~D~~d~~~l~~~~~-------~~d~ 166 (306)
..+|+++||||+++||+++++.|+++|++|++..|+.+++++ .++.++..+.+|++|+++++++++ .+|+
T Consensus 27 L~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDi 106 (273)
T 4fgs_A 27 LNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGGGAVGIQADSANLAELDRLYEKVKAEAGRIDV 106 (273)
T ss_dssp TTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCEEE
T ss_pred hCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 568999999999999999999999999999999999877433 346678899999999988777654 5699
Q ss_pred EEEcCCch------------------------------hhhcccccCCCEEEEecCcccccCCCCcccccchHHHH--HH
Q 021854 167 IICPSEGF------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK--LA 214 (306)
Q Consensus 167 vi~~~~g~------------------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~--~~ 214 (306)
+|++++.. ....+++. .++|++||..+..+......|..+++.- +.
T Consensus 107 LVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~--G~IInisS~~~~~~~~~~~~Y~asKaav~~lt 184 (273)
T 4fgs_A 107 LFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARG--SSVVLTGSTAGSTGTPAFSVYAASKAALRSFA 184 (273)
T ss_dssp EEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEE--EEEEEECCGGGGSCCTTCHHHHHHHHHHHHHH
T ss_pred EEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhC--CeEEEEeehhhccCCCCchHHHHHHHHHHHHH
Confidence 99884421 11123333 5899999998887777777776554321 22
Q ss_pred HHHHHHHHhcCCCEEEEEcCcccCCCCC----Cccee-------eecCCCCccccCHHHHHHHHHHHhhCCC--CCCcEE
Q 021854 215 EQDESMLMASGIPYTIIRTGVLQNTPGG----KQGFQ-------FEEGCAANGSLSKEDAAFICVEALESIP--QTGLIF 281 (306)
Q Consensus 215 ~~aE~~l~~sgi~~tiiRPg~l~~~~~~----~~~~~-------~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~~ 281 (306)
+.....+...||++..|.||++...... ..+.. +.......-+-.++|||.++++++.+.. -.|+++
T Consensus 185 r~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~peeiA~~v~FLaSd~a~~iTG~~i 264 (273)
T 4fgs_A 185 RNWILDLKDRGIRINTLSPGPTETTGLVELAGKDPVQQQGLLNALAAQVPMGRVGRAEEVAAAALFLASDDSSFVTGAEL 264 (273)
T ss_dssp HHHHHHTTTSCEEEEEEEECSBCC---------CHHHHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred HHHHHHhcccCeEEEEEeeCCCCChhHHHhhccCchhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCccCCeE
Confidence 2222334457999999999986432110 00000 0011111235578999999999996543 468999
Q ss_pred EEecCC
Q 021854 282 EVVNGE 287 (306)
Q Consensus 282 ~v~~g~ 287 (306)
.|.+|-
T Consensus 265 ~VDGG~ 270 (273)
T 4fgs_A 265 FVDGGS 270 (273)
T ss_dssp EESTTT
T ss_pred eECcCh
Confidence 998764
|
| >3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A* | Back alignment and structure |
|---|
Probab=99.64 E-value=3.1e-15 Score=135.23 Aligned_cols=192 Identities=10% Similarity=0.047 Sum_probs=129.1
Q ss_pred ccCCCeEEEEcCCCh--HHHHHHHHHHHCCCeEEEEecCc--chhhhh--cCCCceeeeccCCCHHHHHHHhc-------
Q 021854 96 EEARDAVLVTDGDSD--IGQMVILSLIVKRTRIKALVKDK--RNAMES--FGTYVESMAGDASNKKFLKTALR------- 162 (306)
Q Consensus 96 ~~~~~~ilVtGatG~--iG~~l~~~L~~~g~~V~~l~R~~--~~~~~~--~~~~v~~v~~D~~d~~~l~~~~~------- 162 (306)
...+|+|+||||+|+ ||++++++|+++|++|+++.|+. +...+. ....+.++.+|++|.++++++++
T Consensus 23 ~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 102 (280)
T 3nrc_A 23 FLAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQFKDRVEKLCAEFNPAAVLPCDVISDQEIKDLFVELGKVWD 102 (280)
T ss_dssp TTTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHGGGCCSEEEECCTTCHHHHHHHHHHHHHHCS
T ss_pred ccCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCchHHHHHHHHHHhcCCceEEEeecCCHHHHHHHHHHHHHHcC
Confidence 345799999999955 99999999999999999999987 332221 11358899999999998887775
Q ss_pred CccEEEEcCCc-------------h------------------hhhccc---ccCCCEEEEecCcccccCCCCcccccch
Q 021854 163 GVRSIICPSEG-------------F------------------ISNAGS---LKGVQHVILLSQLSVYRGSGGIQALMKG 208 (306)
Q Consensus 163 ~~d~vi~~~~g-------------~------------------~~~~a~---~~gvkr~V~iSS~~~~~~~~~~~~~~~~ 208 (306)
.+|++||+++- . +.+++. ..+..+||++||..++.+......|..+
T Consensus 103 ~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as 182 (280)
T 3nrc_A 103 GLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNRNASMVALTYIGAEKAMPSYNTMGVA 182 (280)
T ss_dssp SCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECGGGTSCCTTTHHHHHH
T ss_pred CCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeccccccCCCCchhhHHH
Confidence 46999998431 0 001111 1235799999999988777666667554
Q ss_pred HHHH--HHHHHHHHHHhcCCCEEEEEcCcccCCCCCCcc---ee---eecCCCCccccCHHHHHHHHHHHhhCCC--CCC
Q 021854 209 NARK--LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQG---FQ---FEEGCAANGSLSKEDAAFICVEALESIP--QTG 278 (306)
Q Consensus 209 ~a~~--~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~~~---~~---~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g 278 (306)
++.. +.+.....+...+++++.|+||++......... .. +........+.+++|+|++++.++.+.. ..|
T Consensus 183 Kaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~~~~~pedvA~~v~~l~s~~~~~~tG 262 (280)
T 3nrc_A 183 KASLEATVRYTALALGEDGIKVNAVSAGPIKTLAASGISNFKKMLDYNAMVSPLKKNVDIMEVGNTVAFLCSDMATGITG 262 (280)
T ss_dssp HHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCSGGGGCTTHHHHHHHHHHHSTTCSCCCHHHHHHHHHHTTSGGGTTCCS
T ss_pred HHHHHHHHHHHHHHHHHcCcEEEEEeeccccchhhhcCcchHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCcccCCcCC
Confidence 4321 112222223457899999999986533211100 00 0011122346789999999999987543 568
Q ss_pred cEEEEecCC
Q 021854 279 LIFEVVNGE 287 (306)
Q Consensus 279 ~~~~v~~g~ 287 (306)
+++++.+|.
T Consensus 263 ~~i~vdgG~ 271 (280)
T 3nrc_A 263 EVVHVDAGY 271 (280)
T ss_dssp CEEEESTTG
T ss_pred cEEEECCCc
Confidence 999999875
|
| >3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.64 E-value=1.6e-15 Score=134.03 Aligned_cols=183 Identities=9% Similarity=0.030 Sum_probs=123.6
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh-------cCCCceeeeccC--CCHHHHHHHhc-----
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------FGTYVESMAGDA--SNKKFLKTALR----- 162 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~-------~~~~v~~v~~D~--~d~~~l~~~~~----- 162 (306)
..+++++||||+|+||++++++|+++|++|+++.|+.++..+. ...++.++.+|+ +|.++++++++
T Consensus 12 l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~~~ 91 (247)
T 3i1j_A 12 LKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVEHE 91 (247)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHHHHh
Confidence 4579999999999999999999999999999999998764321 124677777877 88887776654
Q ss_pred --CccEEEEcCCch---------------------------hhh----cccccCCCEEEEecCcccccCCCCcccccchH
Q 021854 163 --GVRSIICPSEGF---------------------------ISN----AGSLKGVQHVILLSQLSVYRGSGGIQALMKGN 209 (306)
Q Consensus 163 --~~d~vi~~~~g~---------------------------~~~----~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~ 209 (306)
.+|++||+++.. +.+ .+++.+.++||++||..++.+..+...|..++
T Consensus 92 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK 171 (247)
T 3i1j_A 92 FGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSEDASIAFTSSSVGRKGRANWGAYGVSK 171 (247)
T ss_dssp HSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred CCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCeEEEEcchhhcCCCCCcchhHHHH
Confidence 789999984310 111 12445678999999998887776766776544
Q ss_pred HHHH--HHHHHHHHHh-cCCCEEEEEcCcccCCCCCCcceeeecCCCCccccCHHHHHHHHHHHhhCCC--CCCcEEEE
Q 021854 210 ARKL--AEQDESMLMA-SGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEV 283 (306)
Q Consensus 210 a~~~--~~~aE~~l~~-sgi~~tiiRPg~l~~~~~~~~~~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~~~v 283 (306)
+... .+.....+.. .+++++.|+||++........ . .........+++|+|++++.++.+.. -.|+.+++
T Consensus 172 ~a~~~~~~~la~e~~~~~~i~v~~v~PG~v~t~~~~~~---~-~~~~~~~~~~p~dva~~~~~l~s~~~~~itG~~i~~ 246 (247)
T 3i1j_A 172 FATEGLMQTLADELEGVTAVRANSINPGATRTGMRAQA---Y-PDENPLNNPAPEDIMPVYLYLMGPDSTGINGQALNA 246 (247)
T ss_dssp HHHHHHHHHHHHHHTTTSSEEEEEEECCCCSSHHHHHH---S-TTSCGGGSCCGGGGTHHHHHHHSGGGTTCCSCEEEC
T ss_pred HHHHHHHHHHHHHhcCCCCeEEEEEecCcccCccchhc---c-cccCccCCCCHHHHHHHHHHHhCchhccccCeeecC
Confidence 3221 1111122223 689999999998653211000 0 11122345788999999999986532 35666654
|
| >4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A | Back alignment and structure |
|---|
Probab=99.64 E-value=5.8e-15 Score=132.05 Aligned_cols=192 Identities=10% Similarity=0.014 Sum_probs=129.3
Q ss_pred ccCCCeEEEEcCCC--hHHHHHHHHHHHCCCeEEEEecCcchhhh------h-cCCCceeeeccCCCHHHHHHHhc----
Q 021854 96 EEARDAVLVTDGDS--DIGQMVILSLIVKRTRIKALVKDKRNAME------S-FGTYVESMAGDASNKKFLKTALR---- 162 (306)
Q Consensus 96 ~~~~~~ilVtGatG--~iG~~l~~~L~~~g~~V~~l~R~~~~~~~------~-~~~~v~~v~~D~~d~~~l~~~~~---- 162 (306)
...+|+++||||+| +||++++++|+++|++|++..|+.+..++ . .+.++.++.+|++|+++++++++
T Consensus 3 ~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 82 (256)
T 4fs3_A 3 NLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIGK 82 (256)
T ss_dssp CCTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 34689999999987 89999999999999999999999765321 1 23478899999999888776653
Q ss_pred ---CccEEEEcCCch--------hh----------------------hcc--cccCCCEEEEecCcccccCCCCcccccc
Q 021854 163 ---GVRSIICPSEGF--------IS----------------------NAG--SLKGVQHVILLSQLSVYRGSGGIQALMK 207 (306)
Q Consensus 163 ---~~d~vi~~~~g~--------~~----------------------~~a--~~~gvkr~V~iSS~~~~~~~~~~~~~~~ 207 (306)
.+|++|++++.. .. ..+ ...+-.+||++||..+..+......|..
T Consensus 83 ~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnisS~~~~~~~~~~~~Y~a 162 (256)
T 4fs3_A 83 DVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYLGGEFAVQNYNVMGV 162 (256)
T ss_dssp HHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEECGGGTSCCTTTHHHHH
T ss_pred HhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEeccccccCcccchhhHH
Confidence 679999874310 00 000 1122368999999998877777777765
Q ss_pred hHHH--HHHHHHHHHHHhcCCCEEEEEcCcccCCCCCC---ccee---eecCCCCccccCHHHHHHHHHHHhhCCC--CC
Q 021854 208 GNAR--KLAEQDESMLMASGIPYTIIRTGVLQNTPGGK---QGFQ---FEEGCAANGSLSKEDAAFICVEALESIP--QT 277 (306)
Q Consensus 208 ~~a~--~~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~---~~~~---~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~ 277 (306)
+++. .+.+.....+...||++..|.||++....... .... +.......-+..++|||.++++++.+.. -.
T Consensus 163 sKaal~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~Pl~R~g~peevA~~v~fL~Sd~a~~iT 242 (256)
T 4fs3_A 163 AKASLEANVKYLALDLGPDNIRVNAISAGPIRTLSAKGVGGFNTILKEIKERAPLKRNVDQVEVGKTAAYLLSDLSSGVT 242 (256)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGGTTCC
T ss_pred HHHHHHHHHHHHHHHhCccCeEEEEEecCCCCChhhhhccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCcc
Confidence 5432 12232333355689999999999864321110 0000 0011112235678999999999986543 46
Q ss_pred CcEEEEecCC
Q 021854 278 GLIFEVVNGE 287 (306)
Q Consensus 278 g~~~~v~~g~ 287 (306)
|+++.|.+|-
T Consensus 243 G~~i~VDGG~ 252 (256)
T 4fs3_A 243 GENIHVDSGF 252 (256)
T ss_dssp SCEEEESTTG
T ss_pred CCEEEECcCH
Confidence 8999998774
|
| >4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=99.64 E-value=7.7e-16 Score=137.96 Aligned_cols=192 Identities=13% Similarity=0.050 Sum_probs=133.5
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhh------hcCCCceeeeccCCCHHHHHHHhc-------
Q 021854 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTALR------- 162 (306)
Q Consensus 96 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~------~~~~~v~~v~~D~~d~~~l~~~~~------- 162 (306)
+..+|+++||||+++||+++++.|+++|++|++..|+.+++.+ ..+.++..+.+|++|+++++++++
T Consensus 6 ~L~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G 85 (255)
T 4g81_D 6 DLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEGI 85 (255)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHTTC
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHCC
Confidence 3568999999999999999999999999999999999876332 124578889999999988877654
Q ss_pred CccEEEEcCCch------------------------------hhhcc-cccCCCEEEEecCcccccCCCCcccccchHHH
Q 021854 163 GVRSIICPSEGF------------------------------ISNAG-SLKGVQHVILLSQLSVYRGSGGIQALMKGNAR 211 (306)
Q Consensus 163 ~~d~vi~~~~g~------------------------------~~~~a-~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~ 211 (306)
.+|++|++++.. ....+ ++.+-.++|++||..+..+......|..+++.
T Consensus 86 ~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~~~~~~~~~Y~asKaa 165 (255)
T 4g81_D 86 HVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQAARPTVAPYTAAKGG 165 (255)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSBCTTCHHHHHHHHH
T ss_pred CCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhcCCCCCchhHHHHHHH
Confidence 569999984411 11112 23456799999999988877777777654432
Q ss_pred --HHHHHHHHHHHhcCCCEEEEEcCcccCCCC----CCcce--eeecCCCCccccCHHHHHHHHHHHhhCCC--CCCcEE
Q 021854 212 --KLAEQDESMLMASGIPYTIIRTGVLQNTPG----GKQGF--QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIF 281 (306)
Q Consensus 212 --~~~~~aE~~l~~sgi~~tiiRPg~l~~~~~----~~~~~--~~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~~ 281 (306)
.+.+.....+...||++..|.||++..... ..... .+.......-+-.++|||.++++++.+.. -.|+++
T Consensus 166 l~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~Pl~R~g~pediA~~v~fL~S~~a~~iTG~~i 245 (255)
T 4g81_D 166 IKMLTCSMAAEWAQFNIQTNAIGPGYILTDMNTALIEDKQFDSWVKSSTPSQRWGRPEELIGTAIFLSSKASDYINGQII 245 (255)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGHHHHTCHHHHHHHHHHSTTCSCBCGGGGHHHHHHHHSGGGTTCCSCEE
T ss_pred HHHHHHHHHHHhcccCeEEEEEeeCCCCCchhhcccCCHHHHHHHHhCCCCCCCcCHHHHHHHHHHHhCchhCCCcCCEE
Confidence 222333344556899999999998653211 00000 00011112235578999999999886543 468999
Q ss_pred EEecCC
Q 021854 282 EVVNGE 287 (306)
Q Consensus 282 ~v~~g~ 287 (306)
.|.+|-
T Consensus 246 ~VDGG~ 251 (255)
T 4g81_D 246 YVDGGW 251 (255)
T ss_dssp EESTTG
T ss_pred EECCCe
Confidence 998774
|
| >3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A* | Back alignment and structure |
|---|
Probab=99.64 E-value=5.5e-15 Score=134.69 Aligned_cols=192 Identities=8% Similarity=-0.007 Sum_probs=127.8
Q ss_pred ccCCCeEEEEcCCCh--HHHHHHHHHHHCCCeEEEEecCcchh---hhh--cCCCceeeeccCCCHHHHHHHhc------
Q 021854 96 EEARDAVLVTDGDSD--IGQMVILSLIVKRTRIKALVKDKRNA---MES--FGTYVESMAGDASNKKFLKTALR------ 162 (306)
Q Consensus 96 ~~~~~~ilVtGatG~--iG~~l~~~L~~~g~~V~~l~R~~~~~---~~~--~~~~v~~v~~D~~d~~~l~~~~~------ 162 (306)
...+|+++||||+|+ ||++++++|+++|++|+++.|+.+.. .+. ....+.++.+|++|.++++++++
T Consensus 28 ~l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 107 (293)
T 3grk_A 28 LLQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEELGAFVAGHCDVADAASIDAVFETLEKKW 107 (293)
T ss_dssp TTTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred cCCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhc
Confidence 346799999999977 99999999999999999999986421 111 11357899999999998888775
Q ss_pred -CccEEEEcCCch------------------------------hhhcccc--cCCCEEEEecCcccccCCCCcccccchH
Q 021854 163 -GVRSIICPSEGF------------------------------ISNAGSL--KGVQHVILLSQLSVYRGSGGIQALMKGN 209 (306)
Q Consensus 163 -~~d~vi~~~~g~------------------------------~~~~a~~--~gvkr~V~iSS~~~~~~~~~~~~~~~~~ 209 (306)
.+|++||+++-. +.+++.. .+..+||++||..++.+......|..++
T Consensus 108 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~~~~~Y~asK 187 (293)
T 3grk_A 108 GKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYYGAEKVMPNYNVMGVAK 187 (293)
T ss_dssp SCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECGGGTSBCTTTTHHHHHH
T ss_pred CCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeehhhccCCCchHHHHHHH
Confidence 679999984310 0111111 1246999999998887766666675544
Q ss_pred HHH--HHHHHHHHHHhcCCCEEEEEcCcccCCCCCCcc---e---eeecCCCCccccCHHHHHHHHHHHhhCCC--CCCc
Q 021854 210 ARK--LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQG---F---QFEEGCAANGSLSKEDAAFICVEALESIP--QTGL 279 (306)
Q Consensus 210 a~~--~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~~~---~---~~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~ 279 (306)
+.. +.+.....+...+|+++.|+||++......... . .+........+.+++|+|++++.++.+.. ..|+
T Consensus 188 aa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~itG~ 267 (293)
T 3grk_A 188 AALEASVKYLAVDLGPQNIRVNAISAGPIKTLAASGIGDFRYILKWNEYNAPLRRTVTIDEVGDVGLYFLSDLSRSVTGE 267 (293)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECCCCC------CCHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGGTTCCSC
T ss_pred HHHHHHHHHHHHHHhHhCCEEEEEecCCCcchhhhcccchHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCccccCCcce
Confidence 322 112222223457999999999986543211100 0 00011122346789999999999997543 5689
Q ss_pred EEEEecCC
Q 021854 280 IFEVVNGE 287 (306)
Q Consensus 280 ~~~v~~g~ 287 (306)
++++.+|.
T Consensus 268 ~i~vdGG~ 275 (293)
T 3grk_A 268 VHHADSGY 275 (293)
T ss_dssp EEEESTTG
T ss_pred EEEECCCc
Confidence 99999875
|
| >3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A | Back alignment and structure |
|---|
Probab=99.63 E-value=1.7e-15 Score=135.55 Aligned_cols=191 Identities=8% Similarity=0.026 Sum_probs=126.8
Q ss_pred ccCCCeEEEEcCC--ChHHHHHHHHHHHCCCeEEEEecCcchh--------hhhcCCCceeeeccCCCHHHHHHHhc---
Q 021854 96 EEARDAVLVTDGD--SDIGQMVILSLIVKRTRIKALVKDKRNA--------MESFGTYVESMAGDASNKKFLKTALR--- 162 (306)
Q Consensus 96 ~~~~~~ilVtGat--G~iG~~l~~~L~~~g~~V~~l~R~~~~~--------~~~~~~~v~~v~~D~~d~~~l~~~~~--- 162 (306)
...+++++||||+ ++||++++++|+++|++|+++.|+.++. .+..+.++.++.+|++|.++++++++
T Consensus 17 ~l~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~ 96 (267)
T 3gdg_A 17 SLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVKDVV 96 (267)
T ss_dssp CCTTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHHHHH
T ss_pred CcCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHHHHH
Confidence 3467999999999 8999999999999999999998886542 11235688999999999998887765
Q ss_pred ----CccEEEEcCCch--------------------------hh----hcccccCCCEEEEecCcccccCC--CCccccc
Q 021854 163 ----GVRSIICPSEGF--------------------------IS----NAGSLKGVQHVILLSQLSVYRGS--GGIQALM 206 (306)
Q Consensus 163 ----~~d~vi~~~~g~--------------------------~~----~~a~~~gvkr~V~iSS~~~~~~~--~~~~~~~ 206 (306)
.+|++||+++.. +. ..+++.+..+||++||..+..+. .+...|.
T Consensus 97 ~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~Y~ 176 (267)
T 3gdg_A 97 ADFGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERGTGSLVITASMSGHIANFPQEQTSYN 176 (267)
T ss_dssp HHTSCCSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCSSSCCHHHH
T ss_pred HHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcCCceEEEEccccccccCCCCCCCcch
Confidence 569999984310 11 11244567899999998876543 2444564
Q ss_pred chHHHHHHHHHHHHHHh--cCCCEEEEEcCcccCCCCCCc-c---eeeecCCCCccccCHHHHHHHHHHHhhCCC--CCC
Q 021854 207 KGNARKLAEQDESMLMA--SGIPYTIIRTGVLQNTPGGKQ-G---FQFEEGCAANGSLSKEDAAFICVEALESIP--QTG 278 (306)
Q Consensus 207 ~~~a~~~~~~aE~~l~~--sgi~~tiiRPg~l~~~~~~~~-~---~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g 278 (306)
.+++.... .++.+-++ ..++++.|.||++........ . ..+........+.+++|+|++++.++.+.. ..|
T Consensus 177 ~sK~a~~~-~~~~la~e~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~r~~~~~dva~~~~~l~s~~~~~itG 255 (267)
T 3gdg_A 177 VAKAGCIH-MARSLANEWRDFARVNSISPGYIDTGLSDFVPKETQQLWHSMIPMGRDGLAKELKGAYVYFASDASTYTTG 255 (267)
T ss_dssp HHHHHHHH-HHHHHHHHTTTTCEEEEEEECCEECSCGGGSCHHHHHHHHTTSTTSSCEETHHHHHHHHHHHSTTCTTCCS
T ss_pred HHHHHHHH-HHHHHHHHhccCcEEEEEECCccccchhhhCCHHHHHHHHhcCCCCCCcCHHHHHhHhheeecCccccccC
Confidence 43322111 11111111 238899999998653321110 0 001122223445678999999999997543 468
Q ss_pred cEEEEecCC
Q 021854 279 LIFEVVNGE 287 (306)
Q Consensus 279 ~~~~v~~g~ 287 (306)
+++++.+|.
T Consensus 256 ~~i~vdgG~ 264 (267)
T 3gdg_A 256 ADLLIDGGY 264 (267)
T ss_dssp CEEEESTTG
T ss_pred CEEEECCce
Confidence 999998764
|
| >1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* | Back alignment and structure |
|---|
Probab=99.61 E-value=1e-14 Score=129.87 Aligned_cols=187 Identities=13% Similarity=0.065 Sum_probs=119.5
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh-----cCCCceeeeccCCCHHHH----HHHhcCccEEEEc
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-----FGTYVESMAGDASNKKFL----KTALRGVRSIICP 170 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~-----~~~~v~~v~~D~~d~~~l----~~~~~~~d~vi~~ 170 (306)
|+++||||+|+||++++++|+++|++|+++.|+.++.... .+..+..+ |..+.+.+ .+.+.++|++||+
T Consensus 2 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~--d~~~v~~~~~~~~~~~g~iD~lv~n 79 (254)
T 1zmt_A 2 STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAETYPQLKPM--SEQEPAELIEAVTSAYGQVDVLVSN 79 (254)
T ss_dssp CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHCTTSEEC--CCCSHHHHHHHHHHHHSCCCEEEEE
T ss_pred eEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCcEEEE--CHHHHHHHHHHHHHHhCCCCEEEEC
Confidence 6899999999999999999999999999999988764321 12333333 65554332 2234578999998
Q ss_pred CCch---------------------------h----hhcccccCCCEEEEecCcccccCCCCcccccchHHHH--HHHHH
Q 021854 171 SEGF---------------------------I----SNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK--LAEQD 217 (306)
Q Consensus 171 ~~g~---------------------------~----~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~--~~~~a 217 (306)
++-. + ...+++.+.++||++||..++.+......|..+++.. +.+..
T Consensus 80 Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~l 159 (254)
T 1zmt_A 80 DIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPWKELSTYTSARAGACTLANAL 159 (254)
T ss_dssp CCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCCTTCHHHHHHHHHHHHHHHHH
T ss_pred CCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCcccccCCCCchHHHHHHHHHHHHHHHH
Confidence 4310 0 1112345678999999998887666666665543321 11222
Q ss_pred HHHHHhcCCCEEEEEcCcccCCCC---------CCccee---eecCCCCccccCHHHHHHHHHHHhhCCC--CCCcEEEE
Q 021854 218 ESMLMASGIPYTIIRTGVLQNTPG---------GKQGFQ---FEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEV 283 (306)
Q Consensus 218 E~~l~~sgi~~tiiRPg~l~~~~~---------~~~~~~---~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~~~v 283 (306)
...+...+++++.|+||++..... ...... +........+.+++|+|++++.++.++. ..|+.+.+
T Consensus 160 a~e~~~~gi~v~~v~PG~v~~~~~~~~~~T~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~s~~~~~~tG~~~~v 239 (254)
T 1zmt_A 160 SKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQRLGTQKELGELVAFLASGSCDYLTGQVFWL 239 (254)
T ss_dssp HHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHHSSSSSCBCHHHHHHHHHHHHTTSCGGGTTCEEEE
T ss_pred HHHhhhcCcEEEEEecCccccccccccCCCcccccChHHHHHHhccCCCCCCcCHHHHHHHHHHHhCcccCCccCCEEEE
Confidence 222345699999999999721100 000000 0001112346789999999999997654 36889999
Q ss_pred ecCCc
Q 021854 284 VNGEE 288 (306)
Q Consensus 284 ~~g~~ 288 (306)
.+|..
T Consensus 240 dgG~~ 244 (254)
T 1zmt_A 240 AGGFP 244 (254)
T ss_dssp STTCC
T ss_pred CCCch
Confidence 88753
|
| >4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.60 E-value=4.3e-15 Score=132.28 Aligned_cols=191 Identities=16% Similarity=0.150 Sum_probs=132.2
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcch----hhhhcCCCceeeeccCCCHHHHHHHhc--CccEEEEc
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN----AMESFGTYVESMAGDASNKKFLKTALR--GVRSIICP 170 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~----~~~~~~~~v~~v~~D~~d~~~l~~~~~--~~d~vi~~ 170 (306)
..+|+++||||+++||+++++.|+++|++|++..|+... .....+.++..+.+|++|++.++.+++ ++|++|++
T Consensus 7 L~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~g~iDiLVNN 86 (247)
T 4hp8_A 7 LEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAPDETLDIIAKDGGNASALLIDFADPLAAKDSFTDAGFDILVNN 86 (247)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTSTTTTTTSSTTTCCCEEEEC
T ss_pred CCCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHhCCCCEEEEC
Confidence 468999999999999999999999999999999998643 112345678899999999888877765 47999988
Q ss_pred CCch------------------------------hhhccccc-CCCEEEEecCcccccCCCCcccccchHHH--HHHHHH
Q 021854 171 SEGF------------------------------ISNAGSLK-GVQHVILLSQLSVYRGSGGIQALMKGNAR--KLAEQD 217 (306)
Q Consensus 171 ~~g~------------------------------~~~~a~~~-gvkr~V~iSS~~~~~~~~~~~~~~~~~a~--~~~~~a 217 (306)
++.. ....+.+. +-.+||++||..+..+......|..+++. .+.+..
T Consensus 87 AGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~~g~~~~~~Y~asKaav~~ltr~l 166 (247)
T 4hp8_A 87 AGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQGGIRVPSYTAAKHGVAGLTKLL 166 (247)
T ss_dssp CCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCSSCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhCCCCCCChHHHHHHHHHHHHHHHH
Confidence 4411 01112233 35799999999988877777777665432 222333
Q ss_pred HHHHHhcCCCEEEEEcCcccCCCC----CCcc--eeeecCCCCccccCHHHHHHHHHHHhhCCC--CCCcEEEEecCC
Q 021854 218 ESMLMASGIPYTIIRTGVLQNTPG----GKQG--FQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVNGE 287 (306)
Q Consensus 218 E~~l~~sgi~~tiiRPg~l~~~~~----~~~~--~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~~~v~~g~ 287 (306)
...+...||++..|.||++..... .... ..+.......-+-.++|||.++++++.+.. -.|+++.|.+|-
T Consensus 167 A~Ela~~gIrVNaV~PG~i~T~~~~~~~~~~~~~~~~~~~~PlgR~g~peeiA~~v~fLaSd~a~~iTG~~i~VDGG~ 244 (247)
T 4hp8_A 167 ANEWAAKGINVNAIAPGYIETNNTEALRADAARNKAILERIPAGRWGHSEDIAGAAVFLSSAAADYVHGAILNVDGGW 244 (247)
T ss_dssp HHHHGGGTEEEEEEEECSBCSGGGHHHHTSHHHHHHHHTTCTTSSCBCTHHHHHHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred HHHHhhcCeEEEEEeeCCCCCcchhhcccCHHHHHHHHhCCCCCCCcCHHHHHHHHHHHhCchhcCCcCCeEEECccc
Confidence 344556899999999998643221 0000 001011112234577999999999886543 468999998774
|
| >2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae} | Back alignment and structure |
|---|
Probab=99.60 E-value=2e-14 Score=140.88 Aligned_cols=176 Identities=17% Similarity=0.164 Sum_probs=122.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEecCcch---hh----h--hcCCCceeeeccCCCHHHHHHHhcC--cc
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRN---AM----E--SFGTYVESMAGDASNKKFLKTALRG--VR 165 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~l~R~~~~---~~----~--~~~~~v~~v~~D~~d~~~l~~~~~~--~d 165 (306)
++++||||||+|+||.+++++|+++|+ +|++++|+... .. + ..+.++.++.+|++|.+++.+++++ +|
T Consensus 258 ~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~~~ld 337 (511)
T 2z5l_A 258 PSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAERDALAALVTAYPPN 337 (511)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSSCHHHHHHHHHHSCCS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHhcCCCc
Confidence 468999999999999999999999999 68999998742 11 1 1234688999999999999999975 89
Q ss_pred EEEEcCCc----h----------------------hhhccccc-CCCEEEEecCcccccCCCCcccccchHHHHHHHHHH
Q 021854 166 SIICPSEG----F----------------------ISNAGSLK-GVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDE 218 (306)
Q Consensus 166 ~vi~~~~g----~----------------------~~~~a~~~-gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~~~~~aE 218 (306)
+|||+++- . +.+++... +.++||++||..+..+..+...|..+++. ....-
T Consensus 338 ~VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~~V~~SS~a~~~g~~g~~~YaaaKa~--ld~la 415 (511)
T 2z5l_A 338 AVFHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADIKGLDAFVLFSSVTGTWGNAGQGAYAAANAA--LDALA 415 (511)
T ss_dssp EEEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSCTTCCCEEEEEEGGGTTCCTTBHHHHHHHHH--HHHHH
T ss_pred EEEECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeCHHhcCCCCCCHHHHHHHHH--HHHHH
Confidence 99998431 0 12233344 78899999999877666666667544332 22222
Q ss_pred HHHHhcCCCEEEEEcCcccCCCCCCcceeeecCCCCccccCHHHHHHHHHHHhhCCC
Q 021854 219 SMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIP 275 (306)
Q Consensus 219 ~~l~~sgi~~tiiRPg~l~~~~~~~~~~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~ 275 (306)
..++..|+++++|+||.+.+..-......-.........++++|+++++..++..+.
T Consensus 416 ~~~~~~gi~v~sv~pG~~~~tgm~~~~~~~~~~~~g~~~l~~e~~a~~l~~al~~~~ 472 (511)
T 2z5l_A 416 ERRRAAGLPATSVAWGLWGGGGMAAGAGEESLSRRGLRAMDPDAAVDALLGAMGRND 472 (511)
T ss_dssp HHHHTTTCCCEEEEECCBCSTTCCCCHHHHHHHHHTBCCBCHHHHHHHHHHHHHHTC
T ss_pred HHHHHcCCcEEEEECCcccCCcccccccHHHHHhcCCCCCCHHHHHHHHHHHHhCCC
Confidence 335678999999999987432211110000000122457999999999999998654
|
| >4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A* | Back alignment and structure |
|---|
Probab=99.59 E-value=8.2e-15 Score=131.74 Aligned_cols=189 Identities=12% Similarity=0.126 Sum_probs=127.2
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhc-------CccEEE
Q 021854 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR-------GVRSII 168 (306)
Q Consensus 96 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~-------~~d~vi 168 (306)
...+|+++||||+++||++++++|+++|++|++..|+.+... .....+.+|++|.++++.+++ .+|++|
T Consensus 8 ~L~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~----~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDilV 83 (261)
T 4h15_A 8 NLRGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPEGL----PEELFVEADLTTKEGCAIVAEATRQRLGGVDVIV 83 (261)
T ss_dssp CCTTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCTTS----CTTTEEECCTTSHHHHHHHHHHHHHHTSSCSEEE
T ss_pred CCCCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchhCC----CcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 557899999999999999999999999999999999865421 234578899999888776553 579999
Q ss_pred EcCCc-------h-------------------------hhhcccccCCCEEEEecCcccccCCC-CcccccchHHH--HH
Q 021854 169 CPSEG-------F-------------------------ISNAGSLKGVQHVILLSQLSVYRGSG-GIQALMKGNAR--KL 213 (306)
Q Consensus 169 ~~~~g-------~-------------------------~~~~a~~~gvkr~V~iSS~~~~~~~~-~~~~~~~~~a~--~~ 213 (306)
++++. + ....+++.+-.++|++||..+..+.+ ....|..+++. .+
T Consensus 84 nnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Iv~isS~~~~~~~~~~~~~Y~asKaal~~l 163 (261)
T 4h15_A 84 HMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARGSGVVVHVTSIQRVLPLPESTTAYAAAKAALSTY 163 (261)
T ss_dssp ECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTTCHHHHHHHHHHHHH
T ss_pred ECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcCCceEEEEEehhhccCCCCccHHHHHHHHHHHHH
Confidence 87431 0 11123446678999999998776543 34455443321 12
Q ss_pred HHHHHHHHHhcCCCEEEEEcCcccCCCC----------CCcc------ee--eecCCCCccccCHHHHHHHHHHHhhCCC
Q 021854 214 AEQDESMLMASGIPYTIIRTGVLQNTPG----------GKQG------FQ--FEEGCAANGSLSKEDAAFICVEALESIP 275 (306)
Q Consensus 214 ~~~aE~~l~~sgi~~tiiRPg~l~~~~~----------~~~~------~~--~~~g~~~~~~Is~~DVA~~iv~aL~~~~ 275 (306)
.+.....+...||++..|.||++..... .... .. ........-+..++|||.++++++.+..
T Consensus 164 t~~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~peevA~~v~fLaS~~a 243 (261)
T 4h15_A 164 SKAMSKEVSPKGVRVVRVSPGWIETEASVRLAERLAKQAGTDLEGGKKIIMDGLGGIPLGRPAKPEEVANLIAFLASDRA 243 (261)
T ss_dssp HHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTCCTTSSCBCHHHHHHHHHHHHSGGG
T ss_pred HHHHHHHhhhhCeEEEEEeCCCcCCcchhhhhHHHHHhhccchhhHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHhCchh
Confidence 2333334556899999999998643210 0000 00 0011112335678999999999986543
Q ss_pred --CCCcEEEEecCCc
Q 021854 276 --QTGLIFEVVNGEE 288 (306)
Q Consensus 276 --~~g~~~~v~~g~~ 288 (306)
-.|+++.|.+|-.
T Consensus 244 ~~itG~~i~VDGG~v 258 (261)
T 4h15_A 244 ASITGAEYTIDGGTV 258 (261)
T ss_dssp TTCCSCEEEESTTCS
T ss_pred cCccCcEEEECCcCc
Confidence 4689999998753
|
| >3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.59 E-value=3.3e-14 Score=129.12 Aligned_cols=76 Identities=16% Similarity=0.143 Sum_probs=61.6
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhh-------hcCCCceeeeccCCCH-HHHHHHhc------
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME-------SFGTYVESMAGDASNK-KFLKTALR------ 162 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~-------~~~~~v~~v~~D~~d~-~~l~~~~~------ 162 (306)
..+++|+||||+|+||++++++|+++|++|++++|+.++..+ ..+.++.++.+|++|. +.++.+++
T Consensus 10 ~~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~~ 89 (311)
T 3o26_A 10 TKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTHF 89 (311)
T ss_dssp --CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHhC
Confidence 357899999999999999999999999999999999876322 1234788999999997 76665554
Q ss_pred -CccEEEEcCC
Q 021854 163 -GVRSIICPSE 172 (306)
Q Consensus 163 -~~d~vi~~~~ 172 (306)
.+|++||+++
T Consensus 90 g~iD~lv~nAg 100 (311)
T 3o26_A 90 GKLDILVNNAG 100 (311)
T ss_dssp SSCCEEEECCC
T ss_pred CCCCEEEECCc
Confidence 7899999844
|
| >1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... | Back alignment and structure |
|---|
Probab=99.58 E-value=1.1e-14 Score=134.93 Aligned_cols=177 Identities=17% Similarity=0.182 Sum_probs=117.3
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhh---hh---------cCCCceeeeccCCCHHHHHHHhcC---
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM---ES---------FGTYVESMAGDASNKKFLKTALRG--- 163 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~---~~---------~~~~v~~v~~D~~d~~~l~~~~~~--- 163 (306)
+++|+||||+|+||++++++|+++|++|+++.|+.++.. +. .+.++.++.+|++|.++++++++.
T Consensus 2 ~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 81 (327)
T 1jtv_A 2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTE 81 (327)
T ss_dssp CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTT
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHHhc
Confidence 578999999999999999999999999998888654421 11 124688999999999999998875
Q ss_pred --ccEEEEcCCc-----h---------------------hhh----cccccCCCEEEEecCcccccCCCCcccccchHHH
Q 021854 164 --VRSIICPSEG-----F---------------------ISN----AGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR 211 (306)
Q Consensus 164 --~d~vi~~~~g-----~---------------------~~~----~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~ 211 (306)
+|++||+++- + +.+ .+++.+.++||++||..++.+......|..+++.
T Consensus 82 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~IV~isS~~~~~~~~~~~~Y~aSK~a 161 (327)
T 1jtv_A 82 GRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFA 161 (327)
T ss_dssp SCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCCTTCHHHHHHHHH
T ss_pred CCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCcccccCCCCChHHHHHHHH
Confidence 7999998431 0 111 1334578899999999887765555666554332
Q ss_pred H--HHHHHHHHHHhcCCCEEEEEcCcccCCCCCCc-ce---eeecCCC-----------------CccccCHHHHHHHHH
Q 021854 212 K--LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQ-GF---QFEEGCA-----------------ANGSLSKEDAAFICV 268 (306)
Q Consensus 212 ~--~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~~-~~---~~~~g~~-----------------~~~~Is~~DVA~~iv 268 (306)
. +.+.....+...+|++++|+||++........ .. .+...+. .....+++|||++++
T Consensus 162 ~~~~~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~i~ 241 (327)
T 1jtv_A 162 LEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFREAAQNPEEVAEVFL 241 (327)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHCBCHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhcCcEEEEEEeCcccChHHhhhhhcchhhhccCCHHHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHH
Confidence 1 11222222345799999999998653321110 00 0000000 001258999999999
Q ss_pred HHhhCCC
Q 021854 269 EALESIP 275 (306)
Q Consensus 269 ~aL~~~~ 275 (306)
.++..+.
T Consensus 242 ~l~~~~~ 248 (327)
T 1jtv_A 242 TALRAPK 248 (327)
T ss_dssp HHHHCSS
T ss_pred HHHcCCC
Confidence 9998653
|
| >3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A | Back alignment and structure |
|---|
Probab=99.57 E-value=2.7e-14 Score=137.99 Aligned_cols=191 Identities=15% Similarity=0.098 Sum_probs=128.0
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcch--hhhhc-CCCceeeeccCCCHHHHHHHhc-------C-cc
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN--AMESF-GTYVESMAGDASNKKFLKTALR-------G-VR 165 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~--~~~~~-~~~v~~v~~D~~d~~~l~~~~~-------~-~d 165 (306)
..+++++||||+|+||++++++|+++|++|+++.|+... ..+.. ..++.++.+|++|.++++++++ + +|
T Consensus 211 l~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~~~l~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~~~g~~id 290 (454)
T 3u0b_A 211 LDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAAEDLKRVADKVGGTALTLDVTADDAVDKITAHVTEHHGGKVD 290 (454)
T ss_dssp TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHTCEEEECCTTSTTHHHHHHHHHHHHSTTCCS
T ss_pred CCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHHcCCCce
Confidence 457999999999999999999999999999999987532 11111 1246789999999888777664 4 89
Q ss_pred EEEEcCCch--------------------------hhhc----ccccCCCEEEEecCcccccCCCCcccccchHHHH--H
Q 021854 166 SIICPSEGF--------------------------ISNA----GSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK--L 213 (306)
Q Consensus 166 ~vi~~~~g~--------------------------~~~~----a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~--~ 213 (306)
+|||+++-. +.++ +.+.+..+||++||..+..+..+...|..+++.. +
T Consensus 291 ~lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~g~iV~iSS~a~~~g~~g~~~YaasKaal~~l 370 (454)
T 3u0b_A 291 ILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIAGNRGQTNYATTKAGMIGL 370 (454)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCTTCEEEEECCHHHHHCCTTCHHHHHHHHHHHHH
T ss_pred EEEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEEeChHhCCCCCCCHHHHHHHHHHHHH
Confidence 999984410 1111 2223678999999998887777777776554422 2
Q ss_pred HHHHHHHHHhcCCCEEEEEcCcccCCCCCCcce----eeecCCCCccccCHHHHHHHHHHHhhCCC--CCCcEEEEecCC
Q 021854 214 AEQDESMLMASGIPYTIIRTGVLQNTPGGKQGF----QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVNGE 287 (306)
Q Consensus 214 ~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~~~~----~~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~~~v~~g~ 287 (306)
.+.....+...||+++.|+||++.......... .............++|+|+++++++.... -.|+++.+.+|.
T Consensus 371 ~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~l~r~g~pedvA~~v~fL~s~~a~~itG~~i~vdGG~ 450 (454)
T 3u0b_A 371 AEALAPVLADKGITINAVAPGFIETKMTEAIPLATREVGRRLNSLFQGGQPVDVAELIAYFASPASNAVTGNTIRVCGQA 450 (454)
T ss_dssp HHHHHHHHHTTTCEEEEEEECSBCC----------CHHHHHSBTTSSCBCHHHHHHHHHHHHCGGGTTCCSCEEEESSSB
T ss_pred HHHHHHHhhhcCcEEEEEEcCcccChhhhhcchhhHHHHHhhccccCCCCHHHHHHHHHHHhCCccCCCCCcEEEECCcc
Confidence 222223345679999999999865332211000 00011112234578999999999987533 468999998764
|
| >1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} | Back alignment and structure |
|---|
Probab=99.57 E-value=3.2e-15 Score=132.38 Aligned_cols=187 Identities=12% Similarity=0.020 Sum_probs=117.5
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEE-e--cCcchhhhhcC--CCceeeeccCCCHHHH-HHH---hcCccEEEE
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKAL-V--KDKRNAMESFG--TYVESMAGDASNKKFL-KTA---LRGVRSIIC 169 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l-~--R~~~~~~~~~~--~~v~~v~~D~~d~~~l-~~~---~~~~d~vi~ 169 (306)
+|+++||||+|+||++++++|+++|++|+++ . |+.++..+... .+.++. |..+.+.+ +++ +..+|++||
T Consensus 1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~g~iD~lv~ 78 (244)
T 1zmo_A 1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESENPGTIAL--AEQKPERLVDATLQHGEAIDTIVS 78 (244)
T ss_dssp -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHSTTEEEC--CCCCGGGHHHHHGGGSSCEEEEEE
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHHhCCCccc--CHHHHHHHHHHHHHHcCCCCEEEE
Confidence 4789999999999999999999999999999 6 98866432211 122222 44443332 222 346899999
Q ss_pred cCC-------ch----------------------hh----hcccccCCCEEEEecCcccccCCCCcccccchHHHH--HH
Q 021854 170 PSE-------GF----------------------IS----NAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK--LA 214 (306)
Q Consensus 170 ~~~-------g~----------------------~~----~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~--~~ 214 (306)
+++ +. +. ..+.+.+.++||++||..++.+......|..+++.. +.
T Consensus 79 ~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~ 158 (244)
T 1zmo_A 79 NDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAGGASVIFITSSVGKKPLAYNPLYGPARAATVALV 158 (244)
T ss_dssp CCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTCTTHHHHHHHHHHHH
T ss_pred CCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhCCCCCCchHHHHHHHHHHHHH
Confidence 833 11 00 112345678999999998887666666675543321 11
Q ss_pred HHHHHHHHhcCCCEEEEEcCcccCCCC---CCc---ce--eeec-CCCCccccCHHHHHHHHHHHhhCCC--CCCcEEEE
Q 021854 215 EQDESMLMASGIPYTIIRTGVLQNTPG---GKQ---GF--QFEE-GCAANGSLSKEDAAFICVEALESIP--QTGLIFEV 283 (306)
Q Consensus 215 ~~aE~~l~~sgi~~tiiRPg~l~~~~~---~~~---~~--~~~~-g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~~~v 283 (306)
+.....+...+++++.|+||++..... ... .. .+.. ......+.+++|+|++++.++.+.. ..|+.+.+
T Consensus 159 ~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pe~vA~~v~~l~s~~~~~~tG~~i~v 238 (244)
T 1zmo_A 159 ESAAKTLSRDGILLYAIGPNFFNNPTYFPTSDWENNPELRERVDRDVPLGRLGRPDEMGALITFLASRRAAPIVGQFFAF 238 (244)
T ss_dssp HHHHHHHGGGTEEEEEEEESSBCBTTTBCHHHHHHCHHHHHHHHHHCTTCSCBCHHHHHHHHHHHHTTTTGGGTTCEEEE
T ss_pred HHHHHHHhhcCcEEEEEeeCCCcCCcccccccccchHHHHHHHhcCCCCCCCcCHHHHHHHHHHHcCccccCccCCEEEe
Confidence 222222345699999999998654322 100 00 0000 1112346789999999999997644 35889998
Q ss_pred ecCC
Q 021854 284 VNGE 287 (306)
Q Consensus 284 ~~g~ 287 (306)
.+|.
T Consensus 239 dgG~ 242 (244)
T 1zmo_A 239 TGGY 242 (244)
T ss_dssp STTC
T ss_pred CCCC
Confidence 8764
|
| >1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* | Back alignment and structure |
|---|
Probab=99.57 E-value=5.8e-15 Score=131.66 Aligned_cols=185 Identities=12% Similarity=0.062 Sum_probs=119.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHH---CCCeEEEEecCcchhhhh---c-----CCCceeeeccCCCHHHHHHHhc----
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIV---KRTRIKALVKDKRNAMES---F-----GTYVESMAGDASNKKFLKTALR---- 162 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~---~g~~V~~l~R~~~~~~~~---~-----~~~v~~v~~D~~d~~~l~~~~~---- 162 (306)
.+|+++||||+|+||++++++|++ +|++|+++.|+.++..+. . +.++.++.+|++|.++++++++
T Consensus 5 ~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 84 (259)
T 1oaa_A 5 GCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVRE 84 (259)
T ss_dssp BSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHHHHh
Confidence 468999999999999999999999 899999999998663321 1 3468889999999988877653
Q ss_pred -----Ccc--EEEEcCCc------hhh-----------------------h----ccccc--CCCEEEEecCcccccCCC
Q 021854 163 -----GVR--SIICPSEG------FIS-----------------------N----AGSLK--GVQHVILLSQLSVYRGSG 200 (306)
Q Consensus 163 -----~~d--~vi~~~~g------~~~-----------------------~----~a~~~--gvkr~V~iSS~~~~~~~~ 200 (306)
.+| ++||+++. .+. + .+.+. +..+||++||..++.+..
T Consensus 85 ~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~ 164 (259)
T 1oaa_A 85 LPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPYK 164 (259)
T ss_dssp SCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTSCCT
T ss_pred ccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEEcCchhcCCCC
Confidence 357 99987331 000 0 11223 456899999999887766
Q ss_pred CcccccchHHHHHHHHHHHHHHh-cCCCEEEEEcCcccCCCCCC------cce---eeecCCCCccccCHHHHHHHHHHH
Q 021854 201 GIQALMKGNARKLAEQDESMLMA-SGIPYTIIRTGVLQNTPGGK------QGF---QFEEGCAANGSLSKEDAAFICVEA 270 (306)
Q Consensus 201 ~~~~~~~~~a~~~~~~aE~~l~~-sgi~~tiiRPg~l~~~~~~~------~~~---~~~~g~~~~~~Is~~DVA~~iv~a 270 (306)
+...|..+++.... ..+.+-.+ .+++++.|+||++....... ... .+........+.+++|+|++++.+
T Consensus 165 ~~~~Y~asKaa~~~-~~~~la~e~~~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l 243 (259)
T 1oaa_A 165 GWGLYCAGKAARDM-LYQVLAAEEPSVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKSDGALVDCGTSAQKLLGL 243 (259)
T ss_dssp TCHHHHHHHHHHHH-HHHHHHHHCTTEEEEEEECCSBSSHHHHHHHHHCSCHHHHHHHHHHHHTTCSBCHHHHHHHHHHH
T ss_pred CccHHHHHHHHHHH-HHHHHHhhCCCceEEEecCCCcCcchHHHHhhccCChhHHHHHHHhhhcCCcCCHHHHHHHHHHH
Confidence 66667554332111 11111112 24899999999864321100 000 000000123467999999999999
Q ss_pred hhCCC-CCCcEEEE
Q 021854 271 LESIP-QTGLIFEV 283 (306)
Q Consensus 271 L~~~~-~~g~~~~v 283 (306)
+.... ..|+.+.+
T Consensus 244 ~~~~~~itG~~i~v 257 (259)
T 1oaa_A 244 LQKDTFQSGAHVDF 257 (259)
T ss_dssp HHHCCSCTTEEEET
T ss_pred HhhccccCCcEEec
Confidence 97533 34666554
|
| >1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* | Back alignment and structure |
|---|
Probab=99.55 E-value=1.1e-14 Score=134.49 Aligned_cols=184 Identities=13% Similarity=0.050 Sum_probs=117.4
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEec---------Ccchhhh---hcCCCceeeeccCCCHHHHHHHh---
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVK---------DKRNAME---SFGTYVESMAGDASNKKFLKTAL--- 161 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R---------~~~~~~~---~~~~~v~~v~~D~~d~~~l~~~~--- 161 (306)
..+|+++||||+|+||++++++|+++|++|++..| +.++..+ ........+.+|+.|.+++++++
T Consensus 7 l~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~~~~~D~~~~~~~~~~~~~~ 86 (319)
T 1gz6_A 7 FDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVKTA 86 (319)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhCCeEEEeCCCHHHHHHHHHHH
Confidence 45799999999999999999999999999999644 4444221 11111123457999877655543
Q ss_pred ----cCccEEEEcCCc-----h---------------------hh----hcccccCCCEEEEecCcccccCCCCcccccc
Q 021854 162 ----RGVRSIICPSEG-----F---------------------IS----NAGSLKGVQHVILLSQLSVYRGSGGIQALMK 207 (306)
Q Consensus 162 ----~~~d~vi~~~~g-----~---------------------~~----~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~ 207 (306)
..+|++||+++- + +. ..+++.+.++||++||..+..+..+...|..
T Consensus 87 ~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~grIV~vsS~~~~~~~~~~~~Y~a 166 (319)
T 1gz6_A 87 LDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNFGQANYSA 166 (319)
T ss_dssp HHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHH
T ss_pred HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCCCCCHHHHH
Confidence 468999998431 0 01 1124456789999999877655555556655
Q ss_pred hHHHHH--HHHHHHHHHhcCCCEEEEEcCcccCCCCCCcceeeecCCCCccccCHHHHHHHHHHHhhCCC-CCCcEEEEe
Q 021854 208 GNARKL--AEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIP-QTGLIFEVV 284 (306)
Q Consensus 208 ~~a~~~--~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~~~~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~-~~g~~~~v~ 284 (306)
+++... .+.....+...+|+++.|+||++.+ .. .. . + .......++++|+|.+++.++..+. ..|+.|++.
T Consensus 167 SK~a~~~~~~~la~el~~~gI~vn~v~PG~~t~-~~-~~-~-~--~~~~~~~~~p~dvA~~~~~l~s~~~~~tG~~~~v~ 240 (319)
T 1gz6_A 167 AKLGLLGLANTLVIEGRKNNIHCNTIAPNAGSR-MT-ET-V-M--PEDLVEALKPEYVAPLVLWLCHESCEENGGLFEVG 240 (319)
T ss_dssp HHHHHHHHHHHHHHHTGGGTEEEEEEEEECCST-TT-GG-G-S--CHHHHHHSCGGGTHHHHHHHTSTTCCCCSCEEEEE
T ss_pred HHHHHHHHHHHHHHHhcccCEEEEEEeCCCccc-cc-cc-c-C--ChhhhccCCHHHHHHHHHHHhCchhhcCCCEEEEC
Confidence 433221 1111222334689999999998632 11 11 1 0 0111235789999999999987654 357888876
Q ss_pred cC
Q 021854 285 NG 286 (306)
Q Consensus 285 ~g 286 (306)
+|
T Consensus 241 GG 242 (319)
T 1gz6_A 241 AG 242 (319)
T ss_dssp TT
T ss_pred CC
Confidence 54
|
| >2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ... | Back alignment and structure |
|---|
Probab=99.54 E-value=5.2e-14 Score=126.29 Aligned_cols=190 Identities=10% Similarity=0.030 Sum_probs=122.2
Q ss_pred cCCCeEEEEcC--CChHHHHHHHHHHHCCCeEEEEecCcchh-h---hhcCCCceeeeccCCCHHHHHHHhc--------
Q 021854 97 EARDAVLVTDG--DSDIGQMVILSLIVKRTRIKALVKDKRNA-M---ESFGTYVESMAGDASNKKFLKTALR-------- 162 (306)
Q Consensus 97 ~~~~~ilVtGa--tG~iG~~l~~~L~~~g~~V~~l~R~~~~~-~---~~~~~~v~~v~~D~~d~~~l~~~~~-------- 162 (306)
..+|+++|||| +|+||++++++|+++|++|+++.|+.++. . +..+.++.++.+|++|.++++++++
T Consensus 5 l~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 84 (269)
T 2h7i_A 5 LDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIGA 84 (269)
T ss_dssp TTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHCT
T ss_pred cCCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHhcCCCceEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 34689999999 99999999999999999999999987552 2 2234468889999999998888776
Q ss_pred --CccEEEEcCC--c-------h----------------------hhhcccc--cCCCEEEEecCcccccCCCCcccccc
Q 021854 163 --GVRSIICPSE--G-------F----------------------ISNAGSL--KGVQHVILLSQLSVYRGSGGIQALMK 207 (306)
Q Consensus 163 --~~d~vi~~~~--g-------~----------------------~~~~a~~--~gvkr~V~iSS~~~~~~~~~~~~~~~ 207 (306)
.+|++||+++ . . +.+++.. ..-.+||++||... .+......|..
T Consensus 85 ~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~iss~~~-~~~~~~~~Y~a 163 (269)
T 2h7i_A 85 GNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPS-RAMPAYNWMTV 163 (269)
T ss_dssp TCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCS-SCCTTTHHHHH
T ss_pred CCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCeEEEEcCccc-cccCchHHHHH
Confidence 7899999833 1 0 0011111 11258999998765 23333344443
Q ss_pred hHHHH--HHHHHHHHHHhcCCCEEEEEcCcccCCCCC-------Ccc---------eeeecCCCCc-cccCHHHHHHHHH
Q 021854 208 GNARK--LAEQDESMLMASGIPYTIIRTGVLQNTPGG-------KQG---------FQFEEGCAAN-GSLSKEDAAFICV 268 (306)
Q Consensus 208 ~~a~~--~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~-------~~~---------~~~~~g~~~~-~~Is~~DVA~~iv 268 (306)
+++.. +.+.....+...+++++.|+||++...... ... ..+....... .+.+++|+|++++
T Consensus 164 sKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~rr~~~p~dvA~~v~ 243 (269)
T 2h7i_A 164 AKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIGWNMKDATPVAKTVC 243 (269)
T ss_dssp HHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHCTTCCCTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcccCcEEEEEecCcccchhhhccccccchhhHHHHHHHHHHhhhccCCcccCCCCHHHHHHHHH
Confidence 33211 112222224457999999999986432100 000 0000001112 3568899999999
Q ss_pred HHhhCCC--CCCcEEEEecCC
Q 021854 269 EALESIP--QTGLIFEVVNGE 287 (306)
Q Consensus 269 ~aL~~~~--~~g~~~~v~~g~ 287 (306)
.++.+.. -.|+.+.+.+|-
T Consensus 244 ~L~s~~~~~itG~~i~vdGG~ 264 (269)
T 2h7i_A 244 ALLSDWLPATTGDIIYADGGA 264 (269)
T ss_dssp HHHSSSCTTCCSEEEEESTTG
T ss_pred HHhCchhccCcceEEEecCCe
Confidence 9997543 468889888763
|
| >3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A* | Back alignment and structure |
|---|
Probab=99.49 E-value=3.7e-13 Score=131.26 Aligned_cols=178 Identities=18% Similarity=0.140 Sum_probs=123.8
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEecCcch---hh------hhcCCCceeeeccCCCHHHHHHHhcC--
Q 021854 96 EEARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRN---AM------ESFGTYVESMAGDASNKKFLKTALRG-- 163 (306)
Q Consensus 96 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~l~R~~~~---~~------~~~~~~v~~v~~D~~d~~~l~~~~~~-- 163 (306)
..+++++|||||+|+||.+++++|+++|+ +|+++.|+... .. +..+.++.++.+|++|.+++.++++.
T Consensus 236 ~~~~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~ 315 (496)
T 3mje_A 236 PPVHGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAADREALAALLAELP 315 (496)
T ss_dssp CCCCSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTCC
T ss_pred CCCCCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHH
Confidence 33469999999999999999999999998 78888887432 11 12345788999999999999998863
Q ss_pred ----ccEEEEcCCch---------------------------hhhcccccCCCEEEEecCcccccCCCCcccccchHHHH
Q 021854 164 ----VRSIICPSEGF---------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK 212 (306)
Q Consensus 164 ----~d~vi~~~~g~---------------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~ 212 (306)
+|+|||+++-. +.+++...+.++||++||..+..+..+...|..+++..
T Consensus 316 ~~g~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~~~~~iV~~SS~a~~~g~~g~~~YaAaKa~l 395 (496)
T 3mje_A 316 EDAPLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADLDLDAFVLFSSGAAVWGSGGQPGYAAANAYL 395 (496)
T ss_dssp TTSCEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTSCCSEEEEEEEHHHHTTCTTCHHHHHHHHHH
T ss_pred HhCCCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeChHhcCCCCCcHHHHHHHHHH
Confidence 69999984310 22334456778999999998887777777776544432
Q ss_pred HHHHHHHHHHhcCCCEEEEEcCcccCCCCCCcceee-ecCCCCccccCHHHHHHHHHHHhhCCC
Q 021854 213 LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQF-EEGCAANGSLSKEDAAFICVEALESIP 275 (306)
Q Consensus 213 ~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~~~~~~-~~g~~~~~~Is~~DVA~~iv~aL~~~~ 275 (306)
...-..++..|++++.|+||.+.+..-....... .........++++++++++..++..+.
T Consensus 396 --dala~~~~~~Gi~v~sV~pG~w~~~gm~~~~~~~~~l~~~g~~~l~pe~~~~~l~~~l~~~~ 457 (496)
T 3mje_A 396 --DALAEHRRSLGLTASSVAWGTWGEVGMATDPEVHDRLVRQGVLAMEPEHALGALDQMLENDD 457 (496)
T ss_dssp --HHHHHHHHHTTCCCEEEEECEESSSCC------CHHHHHTTEEEECHHHHHHHHHHHHHHTC
T ss_pred --HHHHHHHHhcCCeEEEEECCcccCCccccChHHHHHHHhcCCCCCCHHHHHHHHHHHHcCCC
Confidence 2222346678999999999976532211110000 000112345799999999999998664
|
| >3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=99.41 E-value=5.1e-13 Score=133.66 Aligned_cols=186 Identities=12% Similarity=-0.002 Sum_probs=116.0
Q ss_pred CccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEec---------Ccchhhh---hcCCCceeeeccCCCHHHHHHHhc
Q 021854 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVK---------DKRNAME---SFGTYVESMAGDASNKKFLKTALR 162 (306)
Q Consensus 95 ~~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R---------~~~~~~~---~~~~~v~~v~~D~~d~~~l~~~~~ 162 (306)
....+|+++||||+++||++++++|+++|++|+++.| +.+++.. ........+.+|+.|.++++++++
T Consensus 15 ~~l~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~D~~d~~~~~~~~~ 94 (613)
T 3oml_A 15 LRYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGEAVADYNSVIDGAKVIE 94 (613)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHTTCCEEECCCCGGGHHHHHC
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhCCeEEEEeCCHHHHHHHHH
Confidence 3456899999999999999999999999999999987 3333221 111111234579999887777765
Q ss_pred -------CccEEEEcCCch--------------------------h----hhcccccCCCEEEEecCcccccCCCCcccc
Q 021854 163 -------GVRSIICPSEGF--------------------------I----SNAGSLKGVQHVILLSQLSVYRGSGGIQAL 205 (306)
Q Consensus 163 -------~~d~vi~~~~g~--------------------------~----~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~ 205 (306)
.+|++|++++-. + ...+++.+..+||++||..+..+..+...|
T Consensus 95 ~~~~~~g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~~g~IV~isS~a~~~~~~~~~~Y 174 (613)
T 3oml_A 95 TAIKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGIYGNFGQVNY 174 (613)
T ss_dssp ----------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCHHHHHCCTTCHHH
T ss_pred HHHHHCCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCCCCCChHH
Confidence 469999884410 1 112345667899999999887776666677
Q ss_pred cchHHHH--HHHHHHHHHHhcCCCEEEEEcCcccCCCCCCcceeeecCCCCccccCHHHHHHHHHHHhhCCC-CCCcEEE
Q 021854 206 MKGNARK--LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIP-QTGLIFE 282 (306)
Q Consensus 206 ~~~~a~~--~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~~~~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~-~~g~~~~ 282 (306)
..+++.. +.+.....+...+|.+..|.||.......... .......+.++|+|.+++.++.+.. ..|+.++
T Consensus 175 ~asKaal~~lt~~la~e~~~~gI~vn~v~Pg~~t~~~~~~~------~~~~~~~~~pedvA~~v~~L~s~~~~~tG~~i~ 248 (613)
T 3oml_A 175 TAAKMGLIGLANTVAIEGARNNVLCNVIVPTAASRMTEGIL------PDILFNELKPKLIAPVVAYLCHESCEDNGSYIE 248 (613)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC------CCCC------CHHHHTTCCGGGTHHHHHHTTSTTCCCCSCEEE
T ss_pred HHHHHHHHHHHHHHHHHhCccCeEEEEEECCCCChhhhhcc------chhhhhcCCHHHHHHHHHHhcCCCcCCCceEEE
Confidence 6544322 11222222445799999999997432111100 1112345689999999999887653 3578888
Q ss_pred EecC
Q 021854 283 VVNG 286 (306)
Q Consensus 283 v~~g 286 (306)
+.+|
T Consensus 249 vdGG 252 (613)
T 3oml_A 249 SAAG 252 (613)
T ss_dssp EETT
T ss_pred ECCC
Confidence 8765
|
| >3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae} | Back alignment and structure |
|---|
Probab=99.41 E-value=4.6e-13 Score=131.60 Aligned_cols=176 Identities=15% Similarity=0.063 Sum_probs=116.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCe-EEEE-ecCc-------------chhh------hhcCCCceeeeccCCCHHH
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTR-IKAL-VKDK-------------RNAM------ESFGTYVESMAGDASNKKF 156 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~-V~~l-~R~~-------------~~~~------~~~~~~v~~v~~D~~d~~~ 156 (306)
+++++|||||+|+||.+++++|+++|++ |+++ .|+. +... +..+.++.++.+|++|.++
T Consensus 250 ~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~ 329 (525)
T 3qp9_A 250 ADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLTDAEA 329 (525)
T ss_dssp TTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTTSHHH
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCCCHHH
Confidence 4789999999999999999999999997 5555 7874 2211 1234578899999999999
Q ss_pred HHHHhcC------ccEEEEcCCc----h----------------------hhhcc----cccC-CCEEEEecCcccccCC
Q 021854 157 LKTALRG------VRSIICPSEG----F----------------------ISNAG----SLKG-VQHVILLSQLSVYRGS 199 (306)
Q Consensus 157 l~~~~~~------~d~vi~~~~g----~----------------------~~~~a----~~~g-vkr~V~iSS~~~~~~~ 199 (306)
+.++++. +|+|||+++- . +.+++ ++.+ ..+||++||..+..+.
T Consensus 330 v~~~~~~i~~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~SS~a~~~g~ 409 (525)
T 3qp9_A 330 AARLLAGVSDAHPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPPVLVLFSSVAAIWGG 409 (525)
T ss_dssp HHHHHHTSCTTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCCEEEEEEEGGGTTCC
T ss_pred HHHHHHHHHhcCCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCEEEEECCHHHcCCC
Confidence 9998865 5999998441 0 11112 2223 7899999999988777
Q ss_pred CCcccccchHHHHHHHHHHHHHHhcCCCEEEEEcCcccCCCCCCcceeeecCCCCccccCHHHHHHHHHHHhhCCC
Q 021854 200 GGIQALMKGNARKLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIP 275 (306)
Q Consensus 200 ~~~~~~~~~~a~~~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~~~~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~ 275 (306)
.+...|..+++.... .-..++..|++++.|+||.+...........-.........++.+++++++..++..+.
T Consensus 410 ~g~~~YaaaKa~l~~--lA~~~~~~gi~v~sI~pG~~~tgm~~~~~~~~~~~~~g~~~l~pee~a~~l~~~l~~~~ 483 (525)
T 3qp9_A 410 AGQGAYAAGTAFLDA--LAGQHRADGPTVTSVAWSPWEGSRVTEGATGERLRRLGLRPLAPATALTALDTALGHGD 483 (525)
T ss_dssp TTCHHHHHHHHHHHH--HHTSCCSSCCEEEEEEECCBTTSGGGSSHHHHHHHHTTBCCBCHHHHHHHHHHHHHHTC
T ss_pred CCCHHHHHHHHHHHH--HHHHHHhCCCCEEEEECCccccccccchhhHHHHHhcCCCCCCHHHHHHHHHHHHhCCC
Confidence 777777554332111 11123346899999999997322111110000001112356899999999999998654
|
| >3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ... | Back alignment and structure |
|---|
Probab=99.35 E-value=1.3e-12 Score=120.87 Aligned_cols=187 Identities=15% Similarity=0.094 Sum_probs=117.0
Q ss_pred CCeEEEEcCCC--hHHHHHHHHHHHCCCeEEEEecCc---------chhh---hhc---C---CCceeeeccCCCH--H-
Q 021854 99 RDAVLVTDGDS--DIGQMVILSLIVKRTRIKALVKDK---------RNAM---ESF---G---TYVESMAGDASNK--K- 155 (306)
Q Consensus 99 ~~~ilVtGatG--~iG~~l~~~L~~~g~~V~~l~R~~---------~~~~---~~~---~---~~v~~v~~D~~d~--~- 155 (306)
+|+++||||++ +||++++++|+++|++|++.+|+. ++.. ... . ..+.++.+|+++. +
T Consensus 2 ~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~ 81 (329)
T 3lt0_A 2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAND 81 (329)
T ss_dssp CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTCSSGGG
T ss_pred CcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCccccccccchHHHHHHHHHHHhhcccccccccccccccccchhh
Confidence 58999999975 999999999999999999777554 2211 110 1 2356778888765 5
Q ss_pred -----------------HHHHHh-------cCccEEEEcCC-c---h----------------------------hhhcc
Q 021854 156 -----------------FLKTAL-------RGVRSIICPSE-G---F----------------------------ISNAG 179 (306)
Q Consensus 156 -----------------~l~~~~-------~~~d~vi~~~~-g---~----------------------------~~~~a 179 (306)
++++++ ..+|++|++++ + . +...+
T Consensus 82 ~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m 161 (329)
T 3lt0_A 82 IDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIM 161 (329)
T ss_dssp CCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGE
T ss_pred hhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 555443 35799999843 1 0 01112
Q ss_pred cccCCCEEEEecCcccccCCCCcc-cccchHHHH--HHHHHHHHHHh-cCCCEEEEEcCcccCCCCCC------------
Q 021854 180 SLKGVQHVILLSQLSVYRGSGGIQ-ALMKGNARK--LAEQDESMLMA-SGIPYTIIRTGVLQNTPGGK------------ 243 (306)
Q Consensus 180 ~~~gvkr~V~iSS~~~~~~~~~~~-~~~~~~a~~--~~~~aE~~l~~-sgi~~tiiRPg~l~~~~~~~------------ 243 (306)
++. .+||++||..+..+..... .|..+++.. +.+.....+.. .+|++..|.||++.......
T Consensus 162 ~~~--g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~~~~~la~el~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~ 239 (329)
T 3lt0_A 162 KPQ--SSIISLTYHASQKVVPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATAINKLNNTYENNT 239 (329)
T ss_dssp EEE--EEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHTCC----------
T ss_pred hhC--CeEEEEeCccccCCCCcchHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEecceeechhHhhhhhhcccccccc
Confidence 222 6899999998877666654 676554322 22222333445 79999999999854211000
Q ss_pred -----------------ccee--------------------eecCCCCccccCHHHHHHHHHHHhhCC--CCCCcEEEEe
Q 021854 244 -----------------QGFQ--------------------FEEGCAANGSLSKEDAAFICVEALESI--PQTGLIFEVV 284 (306)
Q Consensus 244 -----------------~~~~--------------------~~~g~~~~~~Is~~DVA~~iv~aL~~~--~~~g~~~~v~ 284 (306)
.+.. +........+.+++|||+++++++.+. .-.|+.+.+.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~v~fL~s~~a~~itG~~i~vd 319 (329)
T 3lt0_A 240 NQNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPLRQKLLSTDIGSVASFLLSRESRAITGQTIYVD 319 (329)
T ss_dssp --------------------------------CHHHHHHHHHHHHSSSCSCCCHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred cccccccccccchhhcccccchhhhhhhhcccchhHHHHHHHhhcCcccCcCCHHHHHHHHHHHhCchhccccCcEEEEc
Confidence 0000 000011123568899999999999643 2468899988
Q ss_pred cCC
Q 021854 285 NGE 287 (306)
Q Consensus 285 ~g~ 287 (306)
+|-
T Consensus 320 GG~ 322 (329)
T 3lt0_A 320 NGL 322 (329)
T ss_dssp TTG
T ss_pred CCe
Confidence 765
|
| >1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A* | Back alignment and structure |
|---|
Probab=99.35 E-value=2.7e-11 Score=109.98 Aligned_cols=191 Identities=13% Similarity=0.018 Sum_probs=111.5
Q ss_pred cCCCeEEEEcCC--ChHHHHHHHHHHHCCCeEEEEecCc-----------chhhhh--cCCC-----ceeeecc------
Q 021854 97 EARDAVLVTDGD--SDIGQMVILSLIVKRTRIKALVKDK-----------RNAMES--FGTY-----VESMAGD------ 150 (306)
Q Consensus 97 ~~~~~ilVtGat--G~iG~~l~~~L~~~g~~V~~l~R~~-----------~~~~~~--~~~~-----v~~v~~D------ 150 (306)
..+|+++||||+ ++||++++++|+++|++|+++.|+. ++..+. ...+ ...+.+|
T Consensus 6 l~~k~~lVTGas~~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (297)
T 1d7o_A 6 LRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVFDNP 85 (297)
T ss_dssp CTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTCCSG
T ss_pred cCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEeeccccchhhhhhhhhhHhhhhhhhccccccccccccccceeccch
Confidence 357899999999 9999999999999999999998642 111111 1100 1222332
Q ss_pred --CC----C--------HHHHHHH-------hcCccEEEEcCCc------h----------------------hhhcccc
Q 021854 151 --AS----N--------KKFLKTA-------LRGVRSIICPSEG------F----------------------ISNAGSL 181 (306)
Q Consensus 151 --~~----d--------~~~l~~~-------~~~~d~vi~~~~g------~----------------------~~~~a~~ 181 (306)
+. | .++++++ +..+|++||+++- . +.+++..
T Consensus 86 ~dv~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~ 165 (297)
T 1d7o_A 86 EDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLP 165 (297)
T ss_dssp GGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGG
T ss_pred hhhhhhhhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 22 1 2233333 3478999998431 0 0111111
Q ss_pred c--CCCEEEEecCcccccCCCCc-ccccchHHHH--HHHHHHHHHH-hcCCCEEEEEcCcccCCCCCCcce---e---ee
Q 021854 182 K--GVQHVILLSQLSVYRGSGGI-QALMKGNARK--LAEQDESMLM-ASGIPYTIIRTGVLQNTPGGKQGF---Q---FE 249 (306)
Q Consensus 182 ~--gvkr~V~iSS~~~~~~~~~~-~~~~~~~a~~--~~~~aE~~l~-~sgi~~tiiRPg~l~~~~~~~~~~---~---~~ 249 (306)
. .-++||++||..+..+.... ..|..+++.. +.+.....+. ..+|+++.|+||++.......... . +.
T Consensus 166 ~m~~~g~iv~isS~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~ 245 (297)
T 1d7o_A 166 IMNPGGASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGFIDTMIEYSY 245 (297)
T ss_dssp GEEEEEEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCCSHHHHHHHHHH
T ss_pred HhccCceEEEEeccccccCCCCcchHHHHHHHHHHHHHHHHHHHhCcccCcEEEEEeccccccchhhhccccHHHHHHhh
Confidence 0 12689999998877655444 3565544322 1122222233 369999999999865332211100 0 00
Q ss_pred cCCCCccccCHHHHHHHHHHHhhCCC--CCCcEEEEecCC
Q 021854 250 EGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVNGE 287 (306)
Q Consensus 250 ~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~~~v~~g~ 287 (306)
.......+.+++|+|++++.++.... ..|+.+++.+|-
T Consensus 246 ~~~p~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdgG~ 285 (297)
T 1d7o_A 246 NNAPIQKTLTADEVGNAAAFLVSPLASAITGATIYVDNGL 285 (297)
T ss_dssp HHSSSCCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred ccCCCCCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCc
Confidence 01112335789999999999887532 468899998774
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=99.30 E-value=4.3e-11 Score=119.42 Aligned_cols=202 Identities=12% Similarity=0.037 Sum_probs=129.0
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCc-chhhhh---cCCCceeeeccC-CCHHHH----HHHhcCccE
Q 021854 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK-RNAMES---FGTYVESMAGDA-SNKKFL----KTALRGVRS 166 (306)
Q Consensus 96 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~-~~~~~~---~~~~v~~v~~D~-~d~~~l----~~~~~~~d~ 166 (306)
...+|+++||||+++||++++++|+++|++|++..|.. +...+. .+..+..+.+|+ .+.+.+ .+.+..+|+
T Consensus 319 ~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~~~~~~~~~~~~~~~G~iDi 398 (604)
T 2et6_A 319 SLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKDATKTVDEIKAAGGEAWPDQHDVAKDSEAIIKNVIDKYGTIDI 398 (604)
T ss_dssp CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHHHSCCCE
T ss_pred ccCCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCccHHHHHHHHHhcCCeEEEEEcChHHHHHHHHHHHHHhcCCCCE
Confidence 34679999999999999999999999999999987633 222111 233456677888 554432 233457899
Q ss_pred EEEcCCch------------------------------hhhcccccCCCEEEEecCcccccCCCCcccccchHHHH--HH
Q 021854 167 IICPSEGF------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK--LA 214 (306)
Q Consensus 167 vi~~~~g~------------------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~--~~ 214 (306)
+|++++-. ....+++.+-.+||++||..+..+..+...|..+++.- +.
T Consensus 399 LVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~ag~~~~~~~~~Y~asKaal~~lt 478 (604)
T 2et6_A 399 LVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSGIYGNFGQANYSSSKAGILGLS 478 (604)
T ss_dssp EEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCTTBHHHHHHHHHHHHHH
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCCCCChhHHHHHHHHHHHH
Confidence 99984410 11123344557999999998877666666676554322 22
Q ss_pred HHHHHHHHhcCCCEEEEEcCcccCCCCCCcceeeecCCCCccccCHHHHHHHHHHHhhCCC-CCCcEEEEecCC------
Q 021854 215 EQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIP-QTGLIFEVVNGE------ 287 (306)
Q Consensus 215 ~~aE~~l~~sgi~~tiiRPg~l~~~~~~~~~~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~-~~g~~~~v~~g~------ 287 (306)
+.....+...||++..|.||. ..+-... . +. ........++|||.++++++.... ..|+++.+.+|.
T Consensus 479 ~~la~El~~~gIrVn~v~PG~--~T~m~~~-~-~~--~~~~~~~~pe~vA~~v~~L~s~~~~itG~~~~vdGG~~~~~~~ 552 (604)
T 2et6_A 479 KTMAIEGAKNNIKVNIVAPHA--ETAMTLS-I-MR--EQDKNLYHADQVAPLLVYLGTDDVPVTGETFEIGGGWIGNTRW 552 (604)
T ss_dssp HHHHHHHGGGTEEEEEEEECC--CCCC-------------CCSSCGGGTHHHHHHTTSTTCCCCSCEEEEETTEEEEEEE
T ss_pred HHHHHHhCccCeEEEEEcCCC--CCccccc-c-Cc--hhhccCCCHHHHHHHHHHHhCCccCCCCcEEEECCCeeEeeee
Confidence 223333556899999999995 2221111 1 10 111235689999999999886543 467888887651
Q ss_pred ------------cCHHHHHHHHHHHhhh
Q 021854 288 ------------EKVSDWKKCFSRLMEK 303 (306)
Q Consensus 288 ------------~s~~d~~~l~~~l~~~ 303 (306)
.+..++.+.+.++...
T Consensus 553 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 580 (604)
T 2et6_A 553 QRAKGAVSHDEHTTVEFIKEHLNEITDF 580 (604)
T ss_dssp EECCCEECCSSSCCHHHHHHHHHHHTCC
T ss_pred eccccccCCCCCCCHHHHHHHHHHHhcc
Confidence 2456777777766543
|
| >2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella} | Back alignment and structure |
|---|
Probab=99.30 E-value=2.8e-11 Score=111.16 Aligned_cols=189 Identities=14% Similarity=0.087 Sum_probs=98.7
Q ss_pred cCCCeEEEEcC--CChHHHHHHHHHHHCCCeEEEEecCc-----------chhhh--------------hcCC------C
Q 021854 97 EARDAVLVTDG--DSDIGQMVILSLIVKRTRIKALVKDK-----------RNAME--------------SFGT------Y 143 (306)
Q Consensus 97 ~~~~~ilVtGa--tG~iG~~l~~~L~~~g~~V~~l~R~~-----------~~~~~--------------~~~~------~ 143 (306)
..+|+++|||| +++||++++++|+++|++|+++.|++ ++..+ .... .
T Consensus 7 l~~k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (319)
T 2ptg_A 7 LRGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEKPVDLVF 86 (319)
T ss_dssp CTTCEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEECHHHHHHHHC--------------------------------CC
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhccccccc
Confidence 34689999999 89999999999999999999998642 11110 0000 0
Q ss_pred ceeeeccC------------CC--------HHHHHHH-------hcCccEEEEcCC------ch----------------
Q 021854 144 VESMAGDA------------SN--------KKFLKTA-------LRGVRSIICPSE------GF---------------- 174 (306)
Q Consensus 144 v~~v~~D~------------~d--------~~~l~~~-------~~~~d~vi~~~~------g~---------------- 174 (306)
..++.+|+ +| .++++++ +..+|++||+++ +.
T Consensus 87 ~~~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~vN 166 (319)
T 2ptg_A 87 DKIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSRKGYLAAVSSS 166 (319)
T ss_dssp SEEEECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEECCSSSSSCGGGCCHHHHHHHHHHH
T ss_pred cccccccccccccccccchhcccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCCccccCCHHHHHHHHhHh
Confidence 24444332 22 1233333 347899998732 10
Q ss_pred ------hhhc----ccccCCCEEEEecCcccccCCCCc-ccccchHHH--HHHHHHHHHHHh-cCCCEEEEEcCcccCCC
Q 021854 175 ------ISNA----GSLKGVQHVILLSQLSVYRGSGGI-QALMKGNAR--KLAEQDESMLMA-SGIPYTIIRTGVLQNTP 240 (306)
Q Consensus 175 ------~~~~----a~~~gvkr~V~iSS~~~~~~~~~~-~~~~~~~a~--~~~~~aE~~l~~-sgi~~tiiRPg~l~~~~ 240 (306)
+..+ +.+ + .+||++||..+..+.... ..|..+++. .+.+.....+.. .+|+++.|+||++....
T Consensus 167 ~~g~~~l~~~~~~~m~~-~-g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~~ 244 (319)
T 2ptg_A 167 SYSFVSLLQHFLPLMKE-G-GSALALSYIASEKVIPGYGGGMSSAKAALESDCRTLAFEAGRARAVRVNCISAGPLKSRA 244 (319)
T ss_dssp THHHHHHHHHHGGGEEE-E-EEEEEEEECC------------------THHHHHHHHHHHHHHHCCEEEEEEECCCC---
T ss_pred hHHHHHHHHHHHHHHhc-C-ceEEEEeccccccccCccchhhHHHHHHHHHHHHHHHHHhccccCeeEEEEeeCCccChh
Confidence 0111 111 2 699999998877654444 356554432 122222223443 79999999999865322
Q ss_pred CCCcc------e---e---eecCCCCccccCHHHHHHHHHHHhhCC--CCCCcEEEEecCC
Q 021854 241 GGKQG------F---Q---FEEGCAANGSLSKEDAAFICVEALESI--PQTGLIFEVVNGE 287 (306)
Q Consensus 241 ~~~~~------~---~---~~~g~~~~~~Is~~DVA~~iv~aL~~~--~~~g~~~~v~~g~ 287 (306)
..... . . +........+.+++|+|+++++++... ...|+.+.+.+|.
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~v~~L~s~~~~~itG~~i~vdGG~ 305 (319)
T 2ptg_A 245 ASAIGKAGDKTFIDLAIDYSEANAPLQKELESDDVGRAALFLLSPLARAVTGATLYVDNGL 305 (319)
T ss_dssp ----------------------------CCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTC
T ss_pred hhhcccccchhhHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhCcccCCccCCEEEECCCc
Confidence 11000 0 0 000011123568899999999998753 2468899998775
|
| >2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A* | Back alignment and structure |
|---|
Probab=99.27 E-value=2e-11 Score=112.02 Aligned_cols=189 Identities=15% Similarity=0.098 Sum_probs=111.2
Q ss_pred cCCCeEEEEcC--CChHHHHHHHHHHHCCCeEEEEecCc-----------chhhh--hcCCC-----ceeeecc------
Q 021854 97 EARDAVLVTDG--DSDIGQMVILSLIVKRTRIKALVKDK-----------RNAME--SFGTY-----VESMAGD------ 150 (306)
Q Consensus 97 ~~~~~ilVtGa--tG~iG~~l~~~L~~~g~~V~~l~R~~-----------~~~~~--~~~~~-----v~~v~~D------ 150 (306)
..+|+++|||| +++||++++++|+++|++|+++.|++ ++..+ ....+ +.++.+|
T Consensus 7 l~gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 86 (315)
T 2o2s_A 7 LRGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDEDRKLPDGSLIEFAGVYPLDAAFDKP 86 (315)
T ss_dssp CTTCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECHHHHHHHHHHHHHTTTHHHHBCTTSCBCCCSCEEECCTTCSST
T ss_pred CCCCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEecccccchhhhhhhhhhhhhhhhhhcccccccccccccccccccc
Confidence 35789999999 89999999999999999999998753 11111 11100 2344333
Q ss_pred ------CCC--------HHHHHHH-------hcCccEEEEcCCc------hh----------------------hhc---
Q 021854 151 ------ASN--------KKFLKTA-------LRGVRSIICPSEG------FI----------------------SNA--- 178 (306)
Q Consensus 151 ------~~d--------~~~l~~~-------~~~~d~vi~~~~g------~~----------------------~~~--- 178 (306)
++| .++++++ +..+|++||+++. .+ .++
T Consensus 87 ~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~ 166 (315)
T 2o2s_A 87 EDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQHFGP 166 (315)
T ss_dssp TSSCHHHHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHST
T ss_pred chhhhhhhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 222 2233333 3478999998431 00 011
Q ss_pred -ccccCCCEEEEecCcccccCCCCc-ccccchHHHH--HHHHHHHHHH-hcCCCEEEEEcCcccCCC----CC-Cc-ce-
Q 021854 179 -GSLKGVQHVILLSQLSVYRGSGGI-QALMKGNARK--LAEQDESMLM-ASGIPYTIIRTGVLQNTP----GG-KQ-GF- 246 (306)
Q Consensus 179 -a~~~gvkr~V~iSS~~~~~~~~~~-~~~~~~~a~~--~~~~aE~~l~-~sgi~~tiiRPg~l~~~~----~~-~~-~~- 246 (306)
+++ + ++||++||..+..+.... ..|..+++.. +.+.....+. ..+|+++.|+||++.... .. .. ..
T Consensus 167 ~m~~-~-g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~ 244 (315)
T 2o2s_A 167 IMNE-G-GSAVTLSYLAAERVVPGYGGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAGPLKSRAASAIGKSGEKSFI 244 (315)
T ss_dssp TEEE-E-EEEEEEEEGGGTSCCTTCCTTHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECCCCCHHHHHTTCSSSSCHH
T ss_pred HHhc-C-CEEEEEecccccccCCCccHHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEecccccchhhhhccccccchhH
Confidence 111 2 689999998887655444 3565544322 1222222233 379999999999864221 00 00 00
Q ss_pred -e----eecCCCCccccCHHHHHHHHHHHhhCCC--CCCcEEEEecCC
Q 021854 247 -Q----FEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVNGE 287 (306)
Q Consensus 247 -~----~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~~~v~~g~ 287 (306)
. +........+.+++|+|+++++++.... -.|+.+.+.+|.
T Consensus 245 ~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~ 292 (315)
T 2o2s_A 245 DYAIDYSYNNAPLRRDLHSDDVGGAALFLLSPLARAVSGVTLYVDNGL 292 (315)
T ss_dssp HHHHHHHHHHSSSCCCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred HHHHHHHhccCCCCCCCCHHHHHHHHHHHhCchhccCcCCEEEECCCe
Confidence 0 0000112235689999999999987532 468889988764
|
| >3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi} | Back alignment and structure |
|---|
Probab=99.25 E-value=2.2e-11 Score=94.51 Aligned_cols=91 Identities=23% Similarity=0.196 Sum_probs=77.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCC-CeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcCCch--
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEGF-- 174 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~g~-- 174 (306)
++++|+|+|+ |++|+.+++.|.+.| ++|+++.|++++.......++.++.+|+.+.+.+.++++++|+||++++..
T Consensus 4 ~~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~~~~~~~ 82 (118)
T 3ic5_A 4 MRWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAALAVLNRMGVATKQVDAKDEAGLAKALGGFDAVISAAPFFLT 82 (118)
T ss_dssp TCEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHHTTTCEEEECCTTCHHHHHHHTTTCSEEEECSCGGGH
T ss_pred CcCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhCCCcEEEecCCCHHHHHHHHcCCCEEEECCCchhh
Confidence 4689999999 999999999999999 999999999987665555578899999999999999999999999986533
Q ss_pred --hhhcccccCCCEEEE
Q 021854 175 --ISNAGSLKGVQHVIL 189 (306)
Q Consensus 175 --~~~~a~~~gvkr~V~ 189 (306)
+.+++.+.++++|.+
T Consensus 83 ~~~~~~~~~~g~~~~~~ 99 (118)
T 3ic5_A 83 PIIAKAAKAAGAHYFDL 99 (118)
T ss_dssp HHHHHHHHHTTCEEECC
T ss_pred HHHHHHHHHhCCCEEEe
Confidence 456677888876654
|
| >3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV} | Back alignment and structure |
|---|
Probab=99.14 E-value=6e-10 Score=105.93 Aligned_cols=176 Identities=13% Similarity=0.004 Sum_probs=110.6
Q ss_pred CCeEEEEcCCChHHHHHHHHHHH-CCCeEEEEecCcchhh------------------hhcCCCceeeeccCCCHHHHHH
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIV-KRTRIKALVKDKRNAM------------------ESFGTYVESMAGDASNKKFLKT 159 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~-~g~~V~~l~R~~~~~~------------------~~~~~~v~~v~~D~~d~~~l~~ 159 (306)
+|++|||||+++||+++++.|++ .|++|+++.|+.+... ...+..+..+.+|++|.+.+++
T Consensus 61 gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dvtd~~~v~~ 140 (422)
T 3s8m_A 61 PKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDAFSDAARAQ 140 (422)
T ss_dssp CSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHHHH
T ss_pred CCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecCCCHHHHHH
Confidence 69999999999999999999999 9999999998765421 1224467889999999877665
Q ss_pred Hh--------cCccEEEEcCCc-----------------hh---------------------------------------
Q 021854 160 AL--------RGVRSIICPSEG-----------------FI--------------------------------------- 175 (306)
Q Consensus 160 ~~--------~~~d~vi~~~~g-----------------~~--------------------------------------- 175 (306)
++ ..+|++|++++. .+
T Consensus 141 ~v~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~v~Vn~~~ 220 (422)
T 3s8m_A 141 VIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIEPASAQEIEDTITVMGGQ 220 (422)
T ss_dssp HHHHHHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHSSH
T ss_pred HHHHHHHHcCCCCCEEEEcCccccccccccccccccccccccccccccccccccccccccccCCCCHHHHHHHHHhhchh
Confidence 44 457999987321 00
Q ss_pred -----hhcccc----cCCCEEEEecCcccccCCCCc--ccccchHHH--HHHHHHHHHHHhcCCCEEEEEcCcccCCCCC
Q 021854 176 -----SNAGSL----KGVQHVILLSQLSVYRGSGGI--QALMKGNAR--KLAEQDESMLMASGIPYTIIRTGVLQNTPGG 242 (306)
Q Consensus 176 -----~~~a~~----~gvkr~V~iSS~~~~~~~~~~--~~~~~~~a~--~~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~ 242 (306)
...+.. .+-.++|++||..+..+.... ..|..+++. .+.+.....+...||++..|.||++......
T Consensus 221 ~~~~~~~a~~~~~m~~~gG~IVniSSi~g~~~~p~~~~~aY~ASKaAl~~lTrsLA~Ela~~GIRVNaVaPG~i~T~~~~ 300 (422)
T 3s8m_A 221 DWELWIDALEGAGVLADGARSVAFSYIGTEITWPIYWHGALGKAKVDLDRTAQRLNARLAKHGGGANVAVLKSVVTQASA 300 (422)
T ss_dssp HHHHHHHHHHHTTCEEEEEEEEEEEECCCGGGHHHHTSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGG
T ss_pred HHHHHHHHHHHHHHhhCCCEEEEEeCchhhccCCCccchHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEcCCCcChhhh
Confidence 011111 112589999998876543332 445443321 1223333345568999999999986543221
Q ss_pred Ccceeee----cCCCCccccCHHHHHHHHHHHhhCC
Q 021854 243 KQGFQFE----EGCAANGSLSKEDAAFICVEALESI 274 (306)
Q Consensus 243 ~~~~~~~----~g~~~~~~Is~~DVA~~iv~aL~~~ 274 (306)
.-+.... ........=..+|||..+.+++.+.
T Consensus 301 ~ip~~~~~~~~~~~~m~r~G~pEdva~~v~~L~sd~ 336 (422)
T 3s8m_A 301 AIPVMPLYISMVYKIMKEKGLHEGTIEQLDRLFRER 336 (422)
T ss_dssp GSTHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHT
T ss_pred cCCCChHHHHHHHhhhcCCcChHHHHHHHHHHhcch
Confidence 1100000 0000011224599999999998754
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=99.12 E-value=4.3e-10 Score=112.25 Aligned_cols=183 Identities=14% Similarity=0.018 Sum_probs=113.0
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCc---------chhhh---hc-CCCceeeeccCCCHHHH------
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK---------RNAME---SF-GTYVESMAGDASNKKFL------ 157 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~---------~~~~~---~~-~~~v~~v~~D~~d~~~l------ 157 (306)
..+|+++||||+++||++++++|+++|++|++..|+. +.+.+ .. ..+.+ ...|+.|.+++
T Consensus 6 l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~-~~~d~~d~~~~~~~v~~ 84 (604)
T 2et6_A 6 FKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGV-AVADYNNVLDGDKIVET 84 (604)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHTTCE-EEEECCCTTCHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhcCCe-EEEEcCCHHHHHHHHHH
Confidence 3578999999999999999999999999999987754 22211 11 11112 23455554222
Q ss_pred -HHHhcCccEEEEcCCch------------------------------hhhcccccCCCEEEEecCcccccCCCCccccc
Q 021854 158 -KTALRGVRSIICPSEGF------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALM 206 (306)
Q Consensus 158 -~~~~~~~d~vi~~~~g~------------------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~ 206 (306)
.+.+..+|++|++++-. ....+++.+-.+||++||..+..+..+...|.
T Consensus 85 ~~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVnisS~ag~~~~~~~~~Y~ 164 (604)
T 2et6_A 85 AVKNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAGLYGNFGQANYA 164 (604)
T ss_dssp HHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTBHHHH
T ss_pred HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCCCCCchHHH
Confidence 23345789999984410 11123345567999999998876666666676
Q ss_pred chHHHH--HHHHHHHHHHhcCCCEEEEEcCcccCCCCCCcceeeecCCCCccccCHHHHHHHHHHHhhCCC-CCCcEEEE
Q 021854 207 KGNARK--LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIP-QTGLIFEV 283 (306)
Q Consensus 207 ~~~a~~--~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~~~~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~-~~g~~~~v 283 (306)
.+++.- +.+.....+...||++..|.|+..++. ... . . .........++|||.++++++.... -.|+++.+
T Consensus 165 asKaal~~lt~~la~El~~~gIrVn~v~Pg~~T~m--~~~-~-~--~~~~~~~~~pe~vA~~v~~L~s~~~~itG~~~~v 238 (604)
T 2et6_A 165 SAKSALLGFAETLAKEGAKYNIKANAIAPLARSRM--TES-I-M--PPPMLEKLGPEKVAPLVLYLSSAENELTGQFFEV 238 (604)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCHH--HHT-T-S--CHHHHTTCSHHHHHHHHHHHTSSSCCCCSCEEEE
T ss_pred HHHHHHHHHHHHHHHHhCccCeEEEEEccCCcCcc--ccc-c-C--ChhhhccCCHHHHHHHHHHHhCCcccCCCCEEEE
Confidence 544321 222223335567999999999742110 000 0 0 0011234689999999999987653 35788888
Q ss_pred ecC
Q 021854 284 VNG 286 (306)
Q Consensus 284 ~~g 286 (306)
.+|
T Consensus 239 dgG 241 (604)
T 2et6_A 239 AAG 241 (604)
T ss_dssp ETT
T ss_pred CCC
Confidence 765
|
| >3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} | Back alignment and structure |
|---|
Probab=99.07 E-value=1.5e-09 Score=111.60 Aligned_cols=174 Identities=19% Similarity=0.195 Sum_probs=120.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHHH-HCCC-eEEEEecCcch---hhh------hcCCCceeeeccCCCHHHHHHHhcC---
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLI-VKRT-RIKALVKDKRN---AME------SFGTYVESMAGDASNKKFLKTALRG--- 163 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~-~~g~-~V~~l~R~~~~---~~~------~~~~~v~~v~~D~~d~~~l~~~~~~--- 163 (306)
++++++||||+|+||+++++.|+ ++|+ +|++++|+... +.+ ..+.++.++.+|++|.++++++++.
T Consensus 529 ~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~G~~v~~~~~Dvsd~~~v~~~~~~~~~ 608 (795)
T 3slk_A 529 AAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAYGAEVSLQACDVADRETLAKVLASIPD 608 (795)
T ss_dssp TTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCT
T ss_pred cccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Confidence 57899999999999999999999 7998 59999998432 111 1245788999999999999988864
Q ss_pred ---ccEEEEcCCc----h----------------------hhhcccccCCCEEEEecCcccccCCCCcccccchHHHHHH
Q 021854 164 ---VRSIICPSEG----F----------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLA 214 (306)
Q Consensus 164 ---~d~vi~~~~g----~----------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~~~ 214 (306)
+|++||+++- . +.++. .... +||++||..+..+..+...|..+++ +.
T Consensus 609 ~~~id~lVnnAGv~~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~-~~~l-~iV~~SS~ag~~g~~g~~~YaAaka--~~ 684 (795)
T 3slk_A 609 EHPLTAVVHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLELI-DPDV-ALVLFSSVSGVLGSGGQGNYAAANS--FL 684 (795)
T ss_dssp TSCEEEEEECCCCCCCCCGGGCCHHHHHHHHCCCCCHHHHHHHHS-CTTS-EEEEEEETHHHHTCSSCHHHHHHHH--HH
T ss_pred hCCCEEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHH-hhCC-EEEEEccHHhcCCCCCCHHHHHHHH--HH
Confidence 5899998431 1 11111 1223 8999999998888777777866543 33
Q ss_pred HHHHHHHHhcCCCEEEEEcCcccCCCCCC---cceeeecCCCCccccCHHHHHHHHHHHhhCCC
Q 021854 215 EQDESMLMASGIPYTIIRTGVLQNTPGGK---QGFQFEEGCAANGSLSKEDAAFICVEALESIP 275 (306)
Q Consensus 215 ~~aE~~l~~sgi~~tiiRPg~l~~~~~~~---~~~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~ 275 (306)
+..-.+++..|++++.|.||.+.+..-.. ....-.........++.+++...+..++..+.
T Consensus 685 ~alA~~~~~~Gi~v~sI~pG~v~t~g~~~~~~~~~~~~~~~~g~~~l~~~e~~~~~~~~l~~~~ 748 (795)
T 3slk_A 685 DALAQQRQSRGLPTRSLAWGPWAEHGMASTLREAEQDRLARSGLLPISTEEGLSQFDAACGGAH 748 (795)
T ss_dssp HHHHHHHHHTTCCEEEEEECCCSCCCHHHHHHHHHHHHHHHTTBCCCCHHHHHHHHHHHHTSSC
T ss_pred HHHHHHHHHcCCeEEEEECCeECcchhhccccHHHHHHHHhcCCCCCCHHHHHHHHHHHHhCCC
Confidence 33445567889999999999876331100 00000001122356888999999988887654
|
| >2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* | Back alignment and structure |
|---|
Probab=99.05 E-value=4.2e-10 Score=122.68 Aligned_cols=188 Identities=12% Similarity=0.058 Sum_probs=114.5
Q ss_pred cCCCeEEEEcCCCh-HHHHHHHHHHHCCCeEEEE-ecCcchhhh-------hc---CCCceeeeccCCCHHHHHHHhc--
Q 021854 97 EARDAVLVTDGDSD-IGQMVILSLIVKRTRIKAL-VKDKRNAME-------SF---GTYVESMAGDASNKKFLKTALR-- 162 (306)
Q Consensus 97 ~~~~~ilVtGatG~-iG~~l~~~L~~~g~~V~~l-~R~~~~~~~-------~~---~~~v~~v~~D~~d~~~l~~~~~-- 162 (306)
..+++++||||+++ ||++++++|++.|++|+++ .|+.++..+ .. +..+.++.+|++|.++++.+++
T Consensus 673 l~gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~alv~~i 752 (1887)
T 2uv8_A 673 FKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEFI 752 (1887)
T ss_dssp CTTCEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHHHHHHH
Confidence 45789999999998 9999999999999999998 566654321 11 3467889999999988887653
Q ss_pred -----------CccEEEEcCC----c-hhh------------------------hcc------cccCCCEEEEecCcccc
Q 021854 163 -----------GVRSIICPSE----G-FIS------------------------NAG------SLKGVQHVILLSQLSVY 196 (306)
Q Consensus 163 -----------~~d~vi~~~~----g-~~~------------------------~~a------~~~gvkr~V~iSS~~~~ 196 (306)
.+|++||+++ + .+. .++ .+.+-.+||++||..+.
T Consensus 753 ~~~~~~~G~G~~LDiLVNNAGi~~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~~~G~IVnISS~ag~ 832 (1887)
T 2uv8_A 753 YDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNHGT 832 (1887)
T ss_dssp HSCTTTTSCCCCCSEEEECCCCCCCSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSCCEEEEEEECSCTTC
T ss_pred HHhccccccCCCCeEEEECCCcCCCCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhCCCCEEEEEcChHhc
Confidence 4899999843 2 100 111 11223589999998876
Q ss_pred cCCCCcccccchHHHHHHHHHHHHHHh---cCCCEEEEEcCccc-CCCCCCcceee-ecCCCCccccCHHHHHHHHHHHh
Q 021854 197 RGSGGIQALMKGNARKLAEQDESMLMA---SGIPYTIIRTGVLQ-NTPGGKQGFQF-EEGCAANGSLSKEDAAFICVEAL 271 (306)
Q Consensus 197 ~~~~~~~~~~~~~a~~~~~~aE~~l~~---sgi~~tiiRPg~l~-~~~~~~~~~~~-~~g~~~~~~Is~~DVA~~iv~aL 271 (306)
.+ +...|..+++.... .....+.. ..|+++.|+||++. ........... ..........+++|+|.+++.++
T Consensus 833 ~g--g~~aYaASKAAL~~-Lttr~lA~ela~~IrVNaV~PG~V~tT~m~~~~~~~~~~~~~~plr~~sPEEVA~avlfLa 909 (1887)
T 2uv8_A 833 FG--GDGMYSESKLSLET-LFNRWHSESWANQLTVCGAIIGWTRGTGLMSANNIIAEGIEKMGVRTFSQKEMAFNLLGLL 909 (1887)
T ss_dssp SS--CBTTHHHHHHHGGG-HHHHHHHSSCTTTEEEEEEEECCEECC-----CCTTHHHHHTTSCCCEEHHHHHHHHHGGG
T ss_pred cC--CCchHHHHHHHHHH-HHHHHHHHHhCCCeEEEEEEecccccccccccchhHHHHHHhcCCCCCCHHHHHHHHHHHh
Confidence 55 34455443321111 00122222 22889999999875 22111000000 00001113458899999999988
Q ss_pred hCC-C--CCCcEEEEe--cCC
Q 021854 272 ESI-P--QTGLIFEVV--NGE 287 (306)
Q Consensus 272 ~~~-~--~~g~~~~v~--~g~ 287 (306)
... . ..|+.+.+. +|-
T Consensus 910 Sd~~as~iTGq~I~VDVDGG~ 930 (1887)
T 2uv8_A 910 TPEVVELCQKSPVMADLNGGL 930 (1887)
T ss_dssp SHHHHHHHHHSCEEEEESCST
T ss_pred CCCccccccCcEEEEECCCCe
Confidence 654 1 235666663 553
|
| >4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A* | Back alignment and structure |
|---|
Probab=99.02 E-value=2.8e-09 Score=101.62 Aligned_cols=187 Identities=9% Similarity=0.001 Sum_probs=114.9
Q ss_pred CCCeEEEEcCCChHHHH--HHHHHHHCCCeEEEEecCcchh------------------hhhcCCCceeeeccCCCHHHH
Q 021854 98 ARDAVLVTDGDSDIGQM--VILSLIVKRTRIKALVKDKRNA------------------MESFGTYVESMAGDASNKKFL 157 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~--l~~~L~~~g~~V~~l~R~~~~~------------------~~~~~~~v~~v~~D~~d~~~l 157 (306)
.+|+++||||+++||++ +++.|+++|++|+++.|+.... ....+..+..+.+|++|.+++
T Consensus 59 ~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvtd~~~v 138 (418)
T 4eue_A 59 GPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDAFSNETK 138 (418)
T ss_dssp CCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTCHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeCCCHHHH
Confidence 37999999999999999 9999999999999999875431 112345688899999998887
Q ss_pred HHHhc-------CccEEEEcCCch-----------------h--------------------------------------
Q 021854 158 KTALR-------GVRSIICPSEGF-----------------I-------------------------------------- 175 (306)
Q Consensus 158 ~~~~~-------~~d~vi~~~~g~-----------------~-------------------------------------- 175 (306)
+++++ .+|++|++++.. +
T Consensus 139 ~~~v~~i~~~~G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~~~vn~~ 218 (418)
T 4eue_A 139 DKVIKYIKDEFGKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEITLKKVSSASIEEIEETRKVMGG 218 (418)
T ss_dssp HHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEEEEEECBCCHHHHHHHHHHHSS
T ss_pred HHHHHHHHHHcCCCCEEEECCcccccccccccccccccccccccccccccccccccccccccccCCCHHHHHHHHHHhhH
Confidence 76653 569999873310 0
Q ss_pred ------hhcccc----cCCCEEEEecCcccccCCCCc--ccccchHHH--HHHHHHHHHHHh-cCCCEEEEEcCcccCCC
Q 021854 176 ------SNAGSL----KGVQHVILLSQLSVYRGSGGI--QALMKGNAR--KLAEQDESMLMA-SGIPYTIIRTGVLQNTP 240 (306)
Q Consensus 176 ------~~~a~~----~gvkr~V~iSS~~~~~~~~~~--~~~~~~~a~--~~~~~aE~~l~~-sgi~~tiiRPg~l~~~~ 240 (306)
...+.. .+-.++|++||.++..+.... ..|..+++. .+.+.....+.. .|+++..|.||.+....
T Consensus 219 ~~~~~~~~~l~~~~~~~~gg~IV~iSSi~~~~~~p~~~~~aY~ASKaAL~~ltrsLA~ELa~~~GIrVN~V~PG~v~T~~ 298 (418)
T 4eue_A 219 EDWQEWCEELLYEDCFSDKATTIAYSYIGSPRTYKIYREGTIGIAKKDLEDKAKLINEKLNRVIGGRAFVSVNKALVTKA 298 (418)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEEEEEECCCCGGGTTTTTTSHHHHHHHHHHHHHHHHHHHHHHHHSCEEEEEECCCCCCHH
T ss_pred HHHHHHHHHHHHHhhhcCCcEEEEEeCchhcCCCCccccHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEECCcCcChh
Confidence 000000 112479999998876654444 556544332 122333344666 79999999999865321
Q ss_pred CCCc-ceee--e-cCCCCccccCHHHHHHHHHHHhhCCCCCCcEEEEe
Q 021854 241 GGKQ-GFQF--E-EGCAANGSLSKEDAAFICVEALESIPQTGLIFEVV 284 (306)
Q Consensus 241 ~~~~-~~~~--~-~g~~~~~~Is~~DVA~~iv~aL~~~~~~g~~~~v~ 284 (306)
...- .... . ........=..+|++..+.+++.+.-..+....+.
T Consensus 299 s~~ip~~p~y~~~~~~~mk~~G~~E~v~e~~~~L~sd~~~~g~~~~~D 346 (418)
T 4eue_A 299 SAYIPTFPLYAAILYKVMKEKNIHENCIMQIERMFSEKIYSNEKIQFD 346 (418)
T ss_dssp HHTSTTHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHTTSSSSCCCCC
T ss_pred hhcCCCCcHHHHHHHHHHhhcCChHHHHHHHHHHhhccccCCCccccC
Confidence 1000 0000 0 00000112245899999999887643334333333
|
| >3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A* | Back alignment and structure |
|---|
Probab=99.02 E-value=3.3e-09 Score=100.15 Aligned_cols=175 Identities=10% Similarity=0.006 Sum_probs=110.3
Q ss_pred CCeEEEEcCCChHHHHHHHHHHH-CCCeEEEEecCcchhh------------------hhcCCCceeeeccCCCHHHHHH
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIV-KRTRIKALVKDKRNAM------------------ESFGTYVESMAGDASNKKFLKT 159 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~-~g~~V~~l~R~~~~~~------------------~~~~~~v~~v~~D~~d~~~l~~ 159 (306)
+|+++||||+++||+++++.|++ .|++|+++.|+.+... ...+..+..+.+|++|.+.+++
T Consensus 47 gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~a~~i~~Dvtd~~~v~~ 126 (405)
T 3zu3_A 47 PKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAKSINGDAFSDEIKQL 126 (405)
T ss_dssp CSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHHHH
T ss_pred CCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCceEEEECCCCCHHHHHH
Confidence 69999999999999999999999 9999999988764321 1224467889999999887776
Q ss_pred Hhc-------CccEEEEcCCch----------------------------------------------------------
Q 021854 160 ALR-------GVRSIICPSEGF---------------------------------------------------------- 174 (306)
Q Consensus 160 ~~~-------~~d~vi~~~~g~---------------------------------------------------------- 174 (306)
+++ .+|++|++++..
T Consensus 127 ~v~~i~~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i~~~t~ee~~~~v~Vn~~~~ 206 (405)
T 3zu3_A 127 TIDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVLQPATQSEIDSTVAVMGGED 206 (405)
T ss_dssp HHHHHHHHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHSSHH
T ss_pred HHHHHHHHcCCCCEEEEcCccccccCccccccccccccccccccccccccccccccccccCCCCCHHHHHHHHHhhchhH
Confidence 653 579999873210
Q ss_pred ---hhhcccc----cCCCEEEEecCcccccCCCCc--ccccchHHH--HHHHHHHHHHHhc-CCCEEEEEcCcccCCCCC
Q 021854 175 ---ISNAGSL----KGVQHVILLSQLSVYRGSGGI--QALMKGNAR--KLAEQDESMLMAS-GIPYTIIRTGVLQNTPGG 242 (306)
Q Consensus 175 ---~~~~a~~----~gvkr~V~iSS~~~~~~~~~~--~~~~~~~a~--~~~~~aE~~l~~s-gi~~tiiRPg~l~~~~~~ 242 (306)
+..++.. .+-.++|++||.++..+.... ..|..+++. .+.+.....+... ||++..|.||.+......
T Consensus 207 ~~~~~~~~~~~~m~~~gG~IVniSSi~~~~~~p~~~~~aY~AaKaal~~ltrsLA~Ela~~~GIRVNaVaPG~i~T~~s~ 286 (405)
T 3zu3_A 207 WQMWIDALLDAGVLAEGAQTTAFTYLGEKITHDIYWNGSIGAAKKDLDQKVLAIRESLAAHGGGDARVSVLKAVVSQASS 286 (405)
T ss_dssp HHHHHHHHHHHTCEEEEEEEEEEECCCCGGGTTTTTTSHHHHHHHHHHHHHHHHHHHHHTTTSCEEEEEECCCCCCHHHH
T ss_pred HHHHHHHHHHHhhhhCCcEEEEEeCchhhCcCCCccchHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEEeCCCcCchhh
Confidence 0011110 112589999999877654443 556544321 1223333345567 999999999986532110
Q ss_pred Cc-ceee--e-cCCCCccccCHHHHHHHHHHHhhC
Q 021854 243 KQ-GFQF--E-EGCAANGSLSKEDAAFICVEALES 273 (306)
Q Consensus 243 ~~-~~~~--~-~g~~~~~~Is~~DVA~~iv~aL~~ 273 (306)
.- .... . ........=..+|+|..+.+++.+
T Consensus 287 ~ip~~p~y~~~l~~~mkr~G~~Ed~a~~i~~L~sd 321 (405)
T 3zu3_A 287 AIPMMPLYLSLLFKVMKEKGTHEGCIEQVYSLYKD 321 (405)
T ss_dssp TSTTHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHH
T ss_pred cCCCCcHHHHHHHHHHhcCCCcHHHHHHHHHHHhc
Confidence 00 0000 0 000001122449999999999875
|
| >2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A* | Back alignment and structure |
|---|
Probab=99.01 E-value=9.6e-10 Score=119.68 Aligned_cols=184 Identities=10% Similarity=0.020 Sum_probs=113.7
Q ss_pred cCCCeEEEEcCCCh-HHHHHHHHHHHCCCeEEEEe-cCcchhh-------hhc---CCCceeeeccCCCHHHHHHHhc--
Q 021854 97 EARDAVLVTDGDSD-IGQMVILSLIVKRTRIKALV-KDKRNAM-------ESF---GTYVESMAGDASNKKFLKTALR-- 162 (306)
Q Consensus 97 ~~~~~ilVtGatG~-iG~~l~~~L~~~g~~V~~l~-R~~~~~~-------~~~---~~~v~~v~~D~~d~~~l~~~~~-- 162 (306)
..++++|||||+|+ ||+++++.|+++|++|+++. |+.++.. ... +..+.++.+|++|.++++++++
T Consensus 650 L~gKvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~alv~~i 729 (1878)
T 2uv9_A 650 FQGKHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEALVNYI 729 (1878)
T ss_dssp CTTCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHH
Confidence 45789999999999 99999999999999999985 5554421 112 3468889999999998887663
Q ss_pred ---------CccEEEEcCC----c-hhh------------------------hc------ccccCCCEEEEecCcccccC
Q 021854 163 ---------GVRSIICPSE----G-FIS------------------------NA------GSLKGVQHVILLSQLSVYRG 198 (306)
Q Consensus 163 ---------~~d~vi~~~~----g-~~~------------------------~~------a~~~gvkr~V~iSS~~~~~~ 198 (306)
.+|++||+++ + .+. .+ +.+.+-.+||++||..+..+
T Consensus 730 ~~~~~~~G~~IDiLVnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~~~G~IVnISS~ag~~g 809 (1878)
T 2uv9_A 730 YDTKNGLGWDLDYVVPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETRPAQVILPLSPNHGTFG 809 (1878)
T ss_dssp HCSSSSCCCCCSEEEECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSCCEEECCEECSCSSSSS
T ss_pred HHhhcccCCCCcEEEeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhCCCCEEEEEcchhhccC
Confidence 4799999833 2 100 00 11122358999999887655
Q ss_pred CCCcccccchHHHHHHHHHHHHHHh---cCCCEEEEEcCccc-CCCCCCcceee-ecCCCCccccCHHHHHHHHHHHhhC
Q 021854 199 SGGIQALMKGNARKLAEQDESMLMA---SGIPYTIIRTGVLQ-NTPGGKQGFQF-EEGCAANGSLSKEDAAFICVEALES 273 (306)
Q Consensus 199 ~~~~~~~~~~~a~~~~~~aE~~l~~---sgi~~tiiRPg~l~-~~~~~~~~~~~-~~g~~~~~~Is~~DVA~~iv~aL~~ 273 (306)
....|..+++.... .+..++.+ ..|+++.|.||++. ........... ..........+++|+|.+++.++..
T Consensus 810 --g~~aYaASKAAL~a-Lt~~laAeEla~~IrVNaVaPG~V~gT~m~~~~~~~~~~~~~~plr~~sPeEVA~avlfLaSd 886 (1878)
T 2uv9_A 810 --NDGLYSESKLALET-LFNRWYSESWGNYLTICGAVIGWTRGTGLMSANNLVAEGVEKLGVRTFSQQEMAFNLLGLMAP 886 (1878)
T ss_dssp --CCSSHHHHHHHHTT-HHHHHHHSTTTTTEEEEEEEECCBCCTTSCSHHHHTHHHHHTTTCCCBCHHHHHHHHHHHHSH
T ss_pred --CchHHHHHHHHHHH-HHHHHHHHHcCCCeEEEEEEecceecCcccccchhhHHHHHhcCCCCCCHHHHHHHHHHHhCC
Confidence 23455443322111 11222221 23899999999865 22211100000 0000111345899999999998865
Q ss_pred CC---CCCcEEEE
Q 021854 274 IP---QTGLIFEV 283 (306)
Q Consensus 274 ~~---~~g~~~~v 283 (306)
.. ..|+.+.+
T Consensus 887 ~a~s~iTGq~I~V 899 (1878)
T 2uv9_A 887 AIVNLCQSDPVFA 899 (1878)
T ss_dssp HHHHHHTTSCEEE
T ss_pred cccccccCcEEEE
Confidence 42 24666666
|
| >2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.98 E-value=2.2e-10 Score=121.64 Aligned_cols=181 Identities=13% Similarity=0.067 Sum_probs=111.2
Q ss_pred cCCCeEEEEcCCCh-HHHHHHHHHHHCCCeEEEE-ecCcchhh---hhc-------CCCceeeeccCCCHHHHHHHhc--
Q 021854 97 EARDAVLVTDGDSD-IGQMVILSLIVKRTRIKAL-VKDKRNAM---ESF-------GTYVESMAGDASNKKFLKTALR-- 162 (306)
Q Consensus 97 ~~~~~ilVtGatG~-iG~~l~~~L~~~g~~V~~l-~R~~~~~~---~~~-------~~~v~~v~~D~~d~~~l~~~~~-- 162 (306)
..+++++||||+++ ||++++++|+++|++|+++ .|+.++.. +.. +..+.++.+|++|.++++++++
T Consensus 474 L~GKvALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~vV~~DVTD~esVeaLVe~I 553 (1688)
T 2pff_A 474 FKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEFI 553 (1688)
T ss_dssp CCSCCEEECSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTTTHHHHTTTTTCCTTCEEEEEECCSSSTTHHHHHHHHH
T ss_pred cCCCEEEEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCCHHHHHHHHHHH
Confidence 45789999999998 9999999999999999998 56654422 111 3357889999999888877652
Q ss_pred -----------CccEEEEcCC----c-hh------------------------hhcc------cccCCCEEEEecCcccc
Q 021854 163 -----------GVRSIICPSE----G-FI------------------------SNAG------SLKGVQHVILLSQLSVY 196 (306)
Q Consensus 163 -----------~~d~vi~~~~----g-~~------------------------~~~a------~~~gvkr~V~iSS~~~~ 196 (306)
.+|++||+++ + .+ ..++ .+.+-.+||++||..+.
T Consensus 554 ~e~~~~~GfG~~IDILVNNAGI~~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~krggGrIVnISSiAG~ 633 (1688)
T 2pff_A 554 YDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNHGT 633 (1688)
T ss_dssp HSCTTSSSCCCCCCEEECCCCCCCCSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTSCEEECCCCCSCTTT
T ss_pred HHhccccccCCCCeEEEECCCcCCCCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhCCCCEEEEEEChHhc
Confidence 4899998833 2 10 0111 11222589999998776
Q ss_pred cCCCCcccccchHHHHHHHHHHHH----HHh---cCCCEEEEEcCcccC-CCCCCcceee-ecCCCCccccCHHHHHHHH
Q 021854 197 RGSGGIQALMKGNARKLAEQDESM----LMA---SGIPYTIIRTGVLQN-TPGGKQGFQF-EEGCAANGSLSKEDAAFIC 267 (306)
Q Consensus 197 ~~~~~~~~~~~~~a~~~~~~aE~~----l~~---sgi~~tiiRPg~l~~-~~~~~~~~~~-~~g~~~~~~Is~~DVA~~i 267 (306)
.+ +...|..+ |...+.+ +.. ..|+++.|.||++.. .......... ..........+++|+|+++
T Consensus 634 ~G--g~saYaAS-----KAAL~aLttrsLAeEla~~IRVNaVaPG~V~TT~M~~~~e~~~~~l~~iplR~~sPEEVA~aI 706 (1688)
T 2pff_A 634 FG--GDGMYSES-----KLSLETLFNRWHSESWANQLTVCGAIIGWTRGTGLMSANNIIAEGIEKMGVRTFSQKEMAFNL 706 (1688)
T ss_dssp SS--CBTTHHHH-----HHHHTHHHHHTTTSSCTTTEECCCCCCCCCCCCSSSCTTTTCSTTTSSSSCCCCCCCTTHHHH
T ss_pred cC--CchHHHHH-----HHHHHHHHHHHHHHHcCCCeEEEEEEECcCcCCcccCCchHHHHHHHhCCCCCCCHHHHHHHH
Confidence 54 33445433 2222222 111 227778889998752 2111100000 0001111345889999999
Q ss_pred HHHhhCCC---CCCcEEEEe
Q 021854 268 VEALESIP---QTGLIFEVV 284 (306)
Q Consensus 268 v~aL~~~~---~~g~~~~v~ 284 (306)
+.++.... ..|+.+.+.
T Consensus 707 lFLaSd~sAs~ITGq~I~VD 726 (1688)
T 2pff_A 707 LGLLTPEVVELCQKSPVMAD 726 (1688)
T ss_dssp HHHTSTTHHHHHTTSCCCCC
T ss_pred HHHhCCCccccccCcEEEEE
Confidence 99887651 246666553
|
| >1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A* | Back alignment and structure |
|---|
Probab=98.85 E-value=2.7e-09 Score=98.47 Aligned_cols=137 Identities=11% Similarity=0.045 Sum_probs=84.5
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCC-------eEEEEecCcc--hhh----hhcCCCceeeeccCCCHHHHHHHhcCcc
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKRT-------RIKALVKDKR--NAM----ESFGTYVESMAGDASNKKFLKTALRGVR 165 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g~-------~V~~l~R~~~--~~~----~~~~~~v~~v~~D~~d~~~l~~~~~~~d 165 (306)
.++|+||||+|+||++++..|+..|+ +|+++.+... +.. +.....+.++ .|+.+.+.+.++++++|
T Consensus 4 ~mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~~~~~~-~di~~~~~~~~a~~~~D 82 (327)
T 1y7t_A 4 PVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLL-AGLEATDDPKVAFKDAD 82 (327)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTE-EEEEEESCHHHHTTTCS
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhhccccccc-CCeEeccChHHHhCCCC
Confidence 47899999999999999999999886 8988877641 111 1111122333 67777667788899999
Q ss_pred EEEEcCC-----ch---------------hhhcccccC-CC-EEEEecCccc---c---cC---CCCcccccchHHHHHH
Q 021854 166 SIICPSE-----GF---------------ISNAGSLKG-VQ-HVILLSQLSV---Y---RG---SGGIQALMKGNARKLA 214 (306)
Q Consensus 166 ~vi~~~~-----g~---------------~~~~a~~~g-vk-r~V~iSS~~~---~---~~---~~~~~~~~~~~a~~~~ 214 (306)
+|||+++ +. +.+++.+.+ .+ +++++|+... + .. ..+...|..++.. ..
T Consensus 83 ~Vih~Ag~~~~~~~~~~~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~snp~~~~~~~~~~~~~~~~p~~~yg~tkl~-~e 161 (327)
T 1y7t_A 83 YALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPANTNALIAYKNAPGLNPRNFTAMTRLD-HN 161 (327)
T ss_dssp EEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHHHHHTCTTSCGGGEEECCHHH-HH
T ss_pred EEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCchhhhHHHHHHHcCCCChhheeccchHH-HH
Confidence 9999833 11 344566664 55 7777776431 0 11 1122234332111 11
Q ss_pred HHHHHHHHhcCCCEEEEEcCccc
Q 021854 215 EQDESMLMASGIPYTIIRTGVLQ 237 (306)
Q Consensus 215 ~~aE~~l~~sgi~~tiiRPg~l~ 237 (306)
+....+.+..+++++++||.++.
T Consensus 162 r~~~~~a~~~g~~~~~vr~~~V~ 184 (327)
T 1y7t_A 162 RAKAQLAKKTGTGVDRIRRMTVW 184 (327)
T ss_dssp HHHHHHHHHHTCCGGGEECCEEE
T ss_pred HHHHHHHHHhCcChhheeeeEEE
Confidence 12222234569999999998743
|
| >2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A* | Back alignment and structure |
|---|
Probab=98.79 E-value=2.8e-08 Score=79.33 Aligned_cols=96 Identities=9% Similarity=0.037 Sum_probs=73.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHH-hcCccEEEEcCCch--
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA-LRGVRSIICPSEGF-- 174 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~-~~~~d~vi~~~~g~-- 174 (306)
++++|+|+|+ |.+|+.+++.|.+.|++|+++.|++++...........+.+|..|.+.+.++ ++++|+||++++..
T Consensus 5 ~~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~~~ 83 (144)
T 2hmt_A 5 KNKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYASYATHAVIANATEENELLSLGIRNFEYVIVAIGANIQ 83 (144)
T ss_dssp -CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHTTTTTCSEEEECCTTCHHHHHTTTGGGCSEEEECCCSCHH
T ss_pred cCCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhCCEEEEeCCCCHHHHHhcCCCCCCEEEECCCCchH
Confidence 3578999998 9999999999999999999999988765443333566788999998888776 78899999985531
Q ss_pred ----hhhcccccCCCEEEEecCcc
Q 021854 175 ----ISNAGSLKGVQHVILLSQLS 194 (306)
Q Consensus 175 ----~~~~a~~~gvkr~V~iSS~~ 194 (306)
....+++.+++++|..++..
T Consensus 84 ~~~~~~~~~~~~~~~~ii~~~~~~ 107 (144)
T 2hmt_A 84 ASTLTTLLLKELDIPNIWVKAQNY 107 (144)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCSH
T ss_pred HHHHHHHHHHHcCCCeEEEEeCCH
Confidence 23445667888777665543
|
| >1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* | Back alignment and structure |
|---|
Probab=98.73 E-value=2.1e-08 Score=90.74 Aligned_cols=76 Identities=12% Similarity=0.125 Sum_probs=64.3
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh---cC--CCceeeeccCCCHHHHHHHhcCccEEEEcC
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FG--TYVESMAGDASNKKFLKTALRGVRSIICPS 171 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~---~~--~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~ 171 (306)
..+++++||||+|++|++++++|++.|++|+++.|+.++..+. +. .++.++.+|++|.+++.++++.+|+||+++
T Consensus 117 l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~DvlVn~a 196 (287)
T 1lu9_A 117 VKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVKGAHFVFTAG 196 (287)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTTTCSEEEECC
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHhCCEEEECC
Confidence 3578999999999999999999999999999999998764322 11 246778899999999999999999999985
Q ss_pred C
Q 021854 172 E 172 (306)
Q Consensus 172 ~ 172 (306)
+
T Consensus 197 g 197 (287)
T 1lu9_A 197 A 197 (287)
T ss_dssp C
T ss_pred C
Confidence 4
|
| >3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=98.72 E-value=5.6e-08 Score=78.07 Aligned_cols=91 Identities=16% Similarity=0.170 Sum_probs=72.0
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHH-hcCccEEEEcCCch---
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA-LRGVRSIICPSEGF--- 174 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~-~~~~d~vi~~~~g~--- 174 (306)
+++|+|+|+ |.+|+.+++.|.+.|++|+++.+++++.......++.++.+|.+|.+.++++ ++++|+||.+.+..
T Consensus 6 ~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~~~~~~~~gd~~~~~~l~~~~~~~~d~vi~~~~~~~~n 84 (141)
T 3llv_A 6 RYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDKSKEKIELLEDEGFDAVIADPTDESFYRSLDLEGVSAVLITGSDDEFN 84 (141)
T ss_dssp CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEEEECCTTCHHHHHHSCCTTCSEEEECCSCHHHH
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHCCCcEEECCCCCHHHHHhCCcccCCEEEEecCCHHHH
Confidence 578999999 9999999999999999999999999876544445688899999999988876 56889999886543
Q ss_pred --hhhcccccCCCEEEEe
Q 021854 175 --ISNAGSLKGVQHVILL 190 (306)
Q Consensus 175 --~~~~a~~~gvkr~V~i 190 (306)
....+++.+..++|-.
T Consensus 85 ~~~~~~a~~~~~~~iia~ 102 (141)
T 3llv_A 85 LKILKALRSVSDVYAIVR 102 (141)
T ss_dssp HHHHHHHHHHCCCCEEEE
T ss_pred HHHHHHHHHhCCceEEEE
Confidence 3344555565555543
|
| >1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9 | Back alignment and structure |
|---|
Probab=98.65 E-value=1.2e-07 Score=75.44 Aligned_cols=92 Identities=17% Similarity=0.110 Sum_probs=70.4
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcC-CCceeeeccCCCHHHHHHH-hcCccEEEEcCCch--
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG-TYVESMAGDASNKKFLKTA-LRGVRSIICPSEGF-- 174 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~-~~v~~v~~D~~d~~~l~~~-~~~~d~vi~~~~g~-- 174 (306)
+++|+|+|+ |.+|+.+++.|.+.|++|+++.|++++...... .++.++.+|..+.+.+.++ ++++|+||++++..
T Consensus 4 ~m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~~~ 82 (140)
T 1lss_A 4 GMYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAVTGKEEV 82 (140)
T ss_dssp -CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEECCSCHHH
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhcCcEEEEcCCCCHHHHHHcCcccCCEEEEeeCCchH
Confidence 478999998 999999999999999999999998876543321 2567788999998887765 78899999985533
Q ss_pred ---hhhcccccCCCEEEEec
Q 021854 175 ---ISNAGSLKGVQHVILLS 191 (306)
Q Consensus 175 ---~~~~a~~~gvkr~V~iS 191 (306)
+...++..+++++|..+
T Consensus 83 ~~~~~~~~~~~~~~~ii~~~ 102 (140)
T 1lss_A 83 NLMSSLLAKSYGINKTIARI 102 (140)
T ss_dssp HHHHHHHHHHTTCCCEEEEC
T ss_pred HHHHHHHHHHcCCCEEEEEe
Confidence 33455667777777543
|
| >2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A* | Back alignment and structure |
|---|
Probab=98.62 E-value=4.2e-07 Score=74.33 Aligned_cols=96 Identities=13% Similarity=0.084 Sum_probs=73.2
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhc-CCCceeeeccCCCHHHHHHH-hcCccEEEEcCCc
Q 021854 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF-GTYVESMAGDASNKKFLKTA-LRGVRSIICPSEG 173 (306)
Q Consensus 96 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~-~~~v~~v~~D~~d~~~l~~~-~~~~d~vi~~~~g 173 (306)
...+++|+|+|+ |.+|+.+++.|.+.|++|+++.|++++..... ..++.++.+|..+.+.+.++ ++++|+||.+++.
T Consensus 16 ~~~~~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~g~~~~~~d~~~~~~l~~~~~~~ad~Vi~~~~~ 94 (155)
T 2g1u_A 16 KQKSKYIVIFGC-GRLGSLIANLASSSGHSVVVVDKNEYAFHRLNSEFSGFTVVGDAAEFETLKECGMEKADMVFAFTND 94 (155)
T ss_dssp -CCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCTTCCSEEEESCTTSHHHHHTTTGGGCSEEEECSSC
T ss_pred ccCCCcEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHhcCCCcEEEecCCCHHHHHHcCcccCCEEEEEeCC
Confidence 345789999997 99999999999999999999999988765443 34567788999988877765 7889999988553
Q ss_pred h-----hhhcccc-cCCCEEEEecC
Q 021854 174 F-----ISNAGSL-KGVQHVILLSQ 192 (306)
Q Consensus 174 ~-----~~~~a~~-~gvkr~V~iSS 192 (306)
. ....++. .+..++|...+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~iv~~~~ 119 (155)
T 2g1u_A 95 DSTNFFISMNARYMFNVENVIARVY 119 (155)
T ss_dssp HHHHHHHHHHHHHTSCCSEEEEECS
T ss_pred cHHHHHHHHHHHHHCCCCeEEEEEC
Confidence 2 2334454 56667766544
|
| >1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9 | Back alignment and structure |
|---|
Probab=98.61 E-value=2.4e-07 Score=75.60 Aligned_cols=90 Identities=18% Similarity=0.259 Sum_probs=70.1
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCc-ch---hhhhcCCCceeeeccCCCHHHHHHH-hcCccEEEEcCCc
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK-RN---AMESFGTYVESMAGDASNKKFLKTA-LRGVRSIICPSEG 173 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~-~~---~~~~~~~~v~~v~~D~~d~~~l~~~-~~~~d~vi~~~~g 173 (306)
.++|+|+|+ |.+|+.++++|.+.|++|+++.|++ ++ ..+..+.++.++.+|.+|.+.+.++ ++++|+||.+++.
T Consensus 3 ~~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~ 81 (153)
T 1id1_A 3 KDHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILALSDN 81 (153)
T ss_dssp CSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEEECSSC
T ss_pred CCcEEEECC-CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhcCCCeEEEcCCCCHHHHHHcChhhCCEEEEecCC
Confidence 578999997 9999999999999999999999985 32 3333455789999999999999887 8999999998554
Q ss_pred h-----hhhccccc-CCCEEEE
Q 021854 174 F-----ISNAGSLK-GVQHVIL 189 (306)
Q Consensus 174 ~-----~~~~a~~~-gvkr~V~ 189 (306)
. ....+++. +..++|.
T Consensus 82 d~~n~~~~~~a~~~~~~~~ii~ 103 (153)
T 1id1_A 82 DADNAFVVLSAKDMSSDVKTVL 103 (153)
T ss_dssp HHHHHHHHHHHHHHTSSSCEEE
T ss_pred hHHHHHHHHHHHHHCCCCEEEE
Confidence 3 23334444 5556654
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* | Back alignment and structure |
|---|
Probab=98.59 E-value=2.4e-07 Score=105.23 Aligned_cols=138 Identities=14% Similarity=0.152 Sum_probs=97.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCe-EEEEecCcchh-------hh--hcCCCceeeeccCCCHHHHHHHhc-----
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTR-IKALVKDKRNA-------ME--SFGTYVESMAGDASNKKFLKTALR----- 162 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~-V~~l~R~~~~~-------~~--~~~~~v~~v~~D~~d~~~l~~~~~----- 162 (306)
.+++++||||+|+||+++++.|+++|++ |++++|+..+. .+ ..+.++.++.+|++|.++++++++
T Consensus 1883 ~~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~ 1962 (2512)
T 2vz8_A 1883 PHKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQGVQVLVSTSNASSLDGARSLITEATQL 1962 (2512)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHHTTCEEEEECCCSSSHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHhCCCEEEEEecCCCCHHHHHHHHHHHHhc
Confidence 5789999999999999999999999996 77888886432 11 124467888999999988877654
Q ss_pred -CccEEEEcCCch--------------------------hhhcccc--cCCCEEEEecCcccccCCCCcccccchHHHHH
Q 021854 163 -GVRSIICPSEGF--------------------------ISNAGSL--KGVQHVILLSQLSVYRGSGGIQALMKGNARKL 213 (306)
Q Consensus 163 -~~d~vi~~~~g~--------------------------~~~~a~~--~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~~ 213 (306)
.+|++||+++-. +.+++.. ....+||++||..+..+..+...|..+++ .
T Consensus 1963 g~id~lVnnAgv~~~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~~g~iV~iSS~ag~~g~~g~~~Y~aaKa--a 2040 (2512)
T 2vz8_A 1963 GPVGGVFNLAMVLRDAVLENQTPEFFQDVSKPKYSGTANLDRVTREACPELDYFVIFSSVSCGRGNAGQANYGFANS--A 2040 (2512)
T ss_dssp SCEEEEEECCCC----------------CTTTTHHHHHHHHHHHHHHCTTCCEEEEECCHHHHTTCTTCHHHHHHHH--H
T ss_pred CCCcEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCEEEEecchhhcCCCCCcHHHHHHHH--H
Confidence 579999984411 1111111 13479999999988777666666754332 2
Q ss_pred HHHHHHHHHhcCCCEEEEEcCccc
Q 021854 214 AEQDESMLMASGIPYTIIRTGVLQ 237 (306)
Q Consensus 214 ~~~aE~~l~~sgi~~tiiRPg~l~ 237 (306)
....-++++..|++.+.+..|.+.
T Consensus 2041 l~~l~~~rr~~Gl~~~a~~~g~~~ 2064 (2512)
T 2vz8_A 2041 MERICEKRRHDGLPGLAVQWGAIG 2064 (2512)
T ss_dssp HHHHHHHHHHTTSCCCEEEECCBC
T ss_pred HHHHHHHHHHCCCcEEEEEccCcC
Confidence 233345566789999999887654
|
| >3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=98.52 E-value=2.3e-07 Score=77.82 Aligned_cols=92 Identities=12% Similarity=0.086 Sum_probs=71.1
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHC-CCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHH--hcCccEEEEcCCc
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVK-RTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA--LRGVRSIICPSEG 173 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~-g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~--~~~~d~vi~~~~g 173 (306)
..+++|+|+|+ |.+|..+++.|.+. |++|+++.|++++.......++.++.+|.++.+.+.++ ++++|+||.+.+.
T Consensus 37 ~~~~~v~IiG~-G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~~g~~~~~gd~~~~~~l~~~~~~~~ad~vi~~~~~ 115 (183)
T 3c85_A 37 PGHAQVLILGM-GRIGTGAYDELRARYGKISLGIEIREEAAQQHRSEGRNVISGDATDPDFWERILDTGHVKLVLLAMPH 115 (183)
T ss_dssp CTTCSEEEECC-SHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHHTTCCEEECCTTCHHHHHTBCSCCCCCEEEECCSS
T ss_pred CCCCcEEEECC-CHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHHCCCCEEEcCCCCHHHHHhccCCCCCCEEEEeCCC
Confidence 34678999996 99999999999999 99999999999876544334677889999999888887 7899999988554
Q ss_pred h-----hhhcccccC-CCEEEE
Q 021854 174 F-----ISNAGSLKG-VQHVIL 189 (306)
Q Consensus 174 ~-----~~~~a~~~g-vkr~V~ 189 (306)
. ....++..+ ..++|.
T Consensus 116 ~~~~~~~~~~~~~~~~~~~ii~ 137 (183)
T 3c85_A 116 HQGNQTALEQLQRRNYKGQIAA 137 (183)
T ss_dssp HHHHHHHHHHHHHTTCCSEEEE
T ss_pred hHHHHHHHHHHHHHCCCCEEEE
Confidence 3 233445555 445554
|
| >3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=98.51 E-value=4.4e-07 Score=84.79 Aligned_cols=93 Identities=19% Similarity=0.197 Sum_probs=72.6
Q ss_pred CccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcCCch
Q 021854 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEGF 174 (306)
Q Consensus 95 ~~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~g~ 174 (306)
.+...|+|+|.|| |++|+.+++.|. +.++|.+..|+.+++... ...+..+..|+.|.+++.++++++|+||++.+.+
T Consensus 12 ~~g~~mkilvlGa-G~vG~~~~~~L~-~~~~v~~~~~~~~~~~~~-~~~~~~~~~d~~d~~~l~~~~~~~DvVi~~~p~~ 88 (365)
T 3abi_A 12 IEGRHMKVLILGA-GNIGRAIAWDLK-DEFDVYIGDVNNENLEKV-KEFATPLKVDASNFDKLVEVMKEFELVIGALPGF 88 (365)
T ss_dssp ----CCEEEEECC-SHHHHHHHHHHT-TTSEEEEEESCHHHHHHH-TTTSEEEECCTTCHHHHHHHHTTCSEEEECCCGG
T ss_pred ccCCccEEEEECC-CHHHHHHHHHHh-cCCCeEEEEcCHHHHHHH-hccCCcEEEecCCHHHHHHHHhCCCEEEEecCCc
Confidence 3445689999999 999999998885 468999999988776543 3467888999999999999999999999987654
Q ss_pred ----hhhcccccCCCEEEEec
Q 021854 175 ----ISNAGSLKGVQHVILLS 191 (306)
Q Consensus 175 ----~~~~a~~~gvkr~V~iS 191 (306)
++++|.++|+ |+|=+|
T Consensus 89 ~~~~v~~~~~~~g~-~yvD~s 108 (365)
T 3abi_A 89 LGFKSIKAAIKSKV-DMVDVS 108 (365)
T ss_dssp GHHHHHHHHHHHTC-EEEECC
T ss_pred ccchHHHHHHhcCc-ceEeee
Confidence 5566777775 666555
|
| >3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A* | Back alignment and structure |
|---|
Probab=98.40 E-value=2e-06 Score=98.36 Aligned_cols=76 Identities=8% Similarity=0.057 Sum_probs=60.6
Q ss_pred cCCCeEEEEcCCCh-HHHHHHHHHHHCCCeEEEEecCcch-----hhh---hc---CCCceeeeccCCCHHHHHHHh---
Q 021854 97 EARDAVLVTDGDSD-IGQMVILSLIVKRTRIKALVKDKRN-----AME---SF---GTYVESMAGDASNKKFLKTAL--- 161 (306)
Q Consensus 97 ~~~~~ilVtGatG~-iG~~l~~~L~~~g~~V~~l~R~~~~-----~~~---~~---~~~v~~v~~D~~d~~~l~~~~--- 161 (306)
..+|+++||||+++ ||+++++.|++.|++|++..|+.+. +.+ .. +..+..+.+|++|.+++++++
T Consensus 2134 l~gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~G~~~~~v~~Dvtd~~~v~~lv~~i 2213 (3089)
T 3zen_D 2134 XXDEVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHARFDATLWVVPANMASYSDIDKLVEWV 2213 (3089)
T ss_dssp CCCCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHHH
Confidence 46899999999999 9999999999999999999998765 221 12 235678899999998887764
Q ss_pred -c-------CccEEEEcCC
Q 021854 162 -R-------GVRSIICPSE 172 (306)
Q Consensus 162 -~-------~~d~vi~~~~ 172 (306)
+ .+|++|++++
T Consensus 2214 ~~~~~~~fG~IDILVNNAG 2232 (3089)
T 3zen_D 2214 GTEQTESLGPQSIHLKDAQ 2232 (3089)
T ss_dssp TSCCEEEESSSEEEECCCC
T ss_pred HhhhhhhcCCCCEEEECCC
Confidence 2 3688888744
|
| >4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes} | Back alignment and structure |
|---|
Probab=98.38 E-value=6e-07 Score=85.20 Aligned_cols=87 Identities=16% Similarity=0.178 Sum_probs=70.5
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCC---CeEEEEecCcchhhhh---cC----CCceeeeccCCCHHHHHHHhcC--ccEE
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVKR---TRIKALVKDKRNAMES---FG----TYVESMAGDASNKKFLKTALRG--VRSI 167 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~g---~~V~~l~R~~~~~~~~---~~----~~v~~v~~D~~d~~~l~~~~~~--~d~v 167 (306)
++|+|+|| |+||+.+++.|++.| .+|++.+|+.+++.+. ++ .++..+.+|+.|.+++++++++ +|+|
T Consensus 2 ~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~~~DvV 80 (405)
T 4ina_A 2 AKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEVKPQIV 80 (405)
T ss_dssp CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHHCCSEE
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhhCCCEE
Confidence 68999999 999999999999998 3899999998874432 21 3588899999999999999988 8999
Q ss_pred EEcCCch----hhhcccccCCCEE
Q 021854 168 ICPSEGF----ISNAGSLKGVQHV 187 (306)
Q Consensus 168 i~~~~g~----~~~~a~~~gvkr~ 187 (306)
|++++.+ +.++|.+.|+..+
T Consensus 81 in~ag~~~~~~v~~a~l~~g~~vv 104 (405)
T 4ina_A 81 LNIALPYQDLTIMEACLRTGVPYL 104 (405)
T ss_dssp EECSCGGGHHHHHHHHHHHTCCEE
T ss_pred EECCCcccChHHHHHHHHhCCCEE
Confidence 9986543 4566777887533
|
| >1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A | Back alignment and structure |
|---|
Probab=98.37 E-value=1.1e-06 Score=84.58 Aligned_cols=73 Identities=10% Similarity=0.063 Sum_probs=62.6
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcC--CCceeeeccCCCHHHHHHHhcCccEEEEcCC
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG--TYVESMAGDASNKKFLKTALRGVRSIICPSE 172 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~--~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~ 172 (306)
+++|+|+| +|++|+++++.|++.|++|++..|+.+++.+... .++..+.+|+.|.+++.++++++|+||++++
T Consensus 3 ~k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~~~~~~~~~~Dv~d~~~l~~~l~~~DvVIn~a~ 77 (450)
T 1ff9_A 3 TKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVAKHDLVISLIP 77 (450)
T ss_dssp CCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTTCTTEEEEECCTTCHHHHHHHHTTSSEEEECCC
T ss_pred CCEEEEEC-CCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHhcCCceEEEeecCCHHHHHHHHcCCcEEEECCc
Confidence 57999998 6999999999999999999999999877554332 2467888999999999999999999999855
|
| >3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12} | Back alignment and structure |
|---|
Probab=98.35 E-value=1.7e-06 Score=69.58 Aligned_cols=75 Identities=15% Similarity=0.200 Sum_probs=64.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHH-hcCccEEEEcCCc
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA-LRGVRSIICPSEG 173 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~-~~~~d~vi~~~~g 173 (306)
..++|+|.|+ |.+|+.+++.|.+.|++|+++.+++++.......++.++.+|.++.+.++++ ++++|++|.+.+.
T Consensus 6 ~~~~viIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~~g~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~ 81 (140)
T 3fwz_A 6 ICNHALLVGY-GRVGSLLGEKLLASDIPLVVIETSRTRVDELRERGVRAVLGNAANEEIMQLAHLECAKWLILTIPN 81 (140)
T ss_dssp CCSCEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEEEESCTTSHHHHHHTTGGGCSEEEECCSC
T ss_pred CCCCEEEECc-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHcCCCEEECCCCCHHHHHhcCcccCCEEEEECCC
Confidence 4679999998 9999999999999999999999999886554445788999999999988775 6788999988553
|
| >3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=98.31 E-value=2e-06 Score=74.21 Aligned_cols=91 Identities=19% Similarity=0.218 Sum_probs=72.0
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcC-CCceeeeccCCCHHHHHHH-hcCccEEEEcCCch---
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG-TYVESMAGDASNKKFLKTA-LRGVRSIICPSEGF--- 174 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~-~~v~~v~~D~~d~~~l~~~-~~~~d~vi~~~~g~--- 174 (306)
|+|+|+|+ |.+|+.+++.|.+.|++|+++.+++++...... .++.++.+|.+|.+.++++ ++++|+||.+++..
T Consensus 1 M~iiIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d~~n 79 (218)
T 3l4b_C 1 MKVIIIGG-ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKLKATIIHGDGSHKEILRDAEVSKNDVVVILTPRDEVN 79 (218)
T ss_dssp CCEEEECC-HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHSSSEEEESCTTSHHHHHHHTCCTTCEEEECCSCHHHH
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHcCCeEEEcCCCCHHHHHhcCcccCCEEEEecCCcHHH
Confidence 57999997 999999999999999999999999987654321 3578999999999999887 78999999885543
Q ss_pred --hhhcccc-cCCCEEEEec
Q 021854 175 --ISNAGSL-KGVQHVILLS 191 (306)
Q Consensus 175 --~~~~a~~-~gvkr~V~iS 191 (306)
....+++ .+..++|-..
T Consensus 80 ~~~~~~a~~~~~~~~iia~~ 99 (218)
T 3l4b_C 80 LFIAQLVMKDFGVKRVVSLV 99 (218)
T ss_dssp HHHHHHHHHTSCCCEEEECC
T ss_pred HHHHHHHHHHcCCCeEEEEE
Confidence 2334444 5777777543
|
| >2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.28 E-value=1.1e-06 Score=85.02 Aligned_cols=77 Identities=16% Similarity=0.114 Sum_probs=62.9
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHC-CCeEEEEecCcchhhhhcC-CCceeeeccCCCHHHHHHHhcCccEEEEcCCc
Q 021854 96 EEARDAVLVTDGDSDIGQMVILSLIVK-RTRIKALVKDKRNAMESFG-TYVESMAGDASNKKFLKTALRGVRSIICPSEG 173 (306)
Q Consensus 96 ~~~~~~ilVtGatG~iG~~l~~~L~~~-g~~V~~l~R~~~~~~~~~~-~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~g 173 (306)
..++++|+|+|| |++|+.+++.|++. |++|+++.|+.+++.+... .++..+.+|+.|.+++.++++++|+||++++.
T Consensus 20 ~l~~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~~~~~~~~~D~~d~~~l~~~l~~~DvVIn~tp~ 98 (467)
T 2axq_A 20 RHMGKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLANAQALAKPSGSKAISLDVTDDSALDKVLADNDVVISLIPY 98 (467)
T ss_dssp ---CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGGGTCEEEECCTTCHHHHHHHHHTSSEEEECSCG
T ss_pred CCCCCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhcCCcEEEEecCCHHHHHHHHcCCCEEEECCch
Confidence 445789999998 99999999999998 7899999999887544322 24677889999999999999999999998553
|
| >2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A | Back alignment and structure |
|---|
Probab=98.19 E-value=2.8e-06 Score=74.04 Aligned_cols=90 Identities=14% Similarity=0.042 Sum_probs=70.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHH-hcCccEEEEcCCch--
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA-LRGVRSIICPSEGF-- 174 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~-~~~~d~vi~~~~g~-- 174 (306)
..++|+|.|+ |.+|+.++++|.+.|+ |+++.|+++...... .++.++.+|.+|.+.++++ ++++|.||.+++..
T Consensus 8 ~~~~viI~G~-G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~-~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d~~ 84 (234)
T 2aef_A 8 KSRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKKVLR-SGANFVHGDPTRVSDLEKANVRGARAVIVDLESDSE 84 (234)
T ss_dssp --CEEEEESC-CHHHHHHHHHSTTSEE-EEEESCGGGHHHHHH-TTCEEEESCTTCHHHHHHTTCTTCSEEEECCSCHHH
T ss_pred CCCEEEEECC-ChHHHHHHHHHHhCCe-EEEEECCHHHHHHHh-cCCeEEEcCCCCHHHHHhcCcchhcEEEEcCCCcHH
Confidence 3578999998 9999999999999999 999999988755444 5689999999999999887 89999999885532
Q ss_pred ---hhhcccccCCC-EEEEe
Q 021854 175 ---ISNAGSLKGVQ-HVILL 190 (306)
Q Consensus 175 ---~~~~a~~~gvk-r~V~i 190 (306)
....+++.+.+ ++|.-
T Consensus 85 n~~~~~~a~~~~~~~~iia~ 104 (234)
T 2aef_A 85 TIHCILGIRKIDESVRIIAE 104 (234)
T ss_dssp HHHHHHHHHHHCSSSEEEEE
T ss_pred HHHHHHHHHHHCCCCeEEEE
Confidence 33445666665 55543
|
| >1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1 | Back alignment and structure |
|---|
Probab=98.19 E-value=3.5e-06 Score=71.29 Aligned_cols=94 Identities=15% Similarity=0.101 Sum_probs=63.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHH---HHHHHhc--CccEEEEcCC
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKK---FLKTALR--GVRSIICPSE 172 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~---~l~~~~~--~~d~vi~~~~ 172 (306)
++++|+|+||+|+||..+++.+...|++|+++.|++++.+.....+... ..|+.+.+ .+.+... ++|++|++++
T Consensus 38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~g~~~-~~d~~~~~~~~~~~~~~~~~~~D~vi~~~g 116 (198)
T 1pqw_A 38 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSRLGVEY-VGDSRSVDFADEILELTDGYGVDVVLNSLA 116 (198)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHTTCCSE-EEETTCSTHHHHHHHHTTTCCEEEEEECCC
T ss_pred CCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCE-EeeCCcHHHHHHHHHHhCCCCCeEEEECCc
Confidence 4689999999999999999999999999999999887643222222222 24665533 3333332 5899998865
Q ss_pred chh----hhcccccCCCEEEEecCcc
Q 021854 173 GFI----SNAGSLKGVQHVILLSQLS 194 (306)
Q Consensus 173 g~~----~~~a~~~gvkr~V~iSS~~ 194 (306)
+.. .+.++.. .++|.+++..
T Consensus 117 ~~~~~~~~~~l~~~--G~~v~~g~~~ 140 (198)
T 1pqw_A 117 GEAIQRGVQILAPG--GRFIELGKKD 140 (198)
T ss_dssp THHHHHHHHTEEEE--EEEEECSCGG
T ss_pred hHHHHHHHHHhccC--CEEEEEcCCC
Confidence 432 2233333 4899888754
|
| >1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A | Back alignment and structure |
|---|
Probab=98.18 E-value=4e-06 Score=77.23 Aligned_cols=95 Identities=15% Similarity=0.143 Sum_probs=64.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCC--CeEEEEecCcch--hhhhcCCCce-eeeccCCCHHHHHHHhcCccEEEEcCC
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRN--AMESFGTYVE-SMAGDASNKKFLKTALRGVRSIICPSE 172 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g--~~V~~l~R~~~~--~~~~~~~~v~-~v~~D~~d~~~l~~~~~~~d~vi~~~~ 172 (306)
++++|+|+||+|++|..++..|+..| .+|+++.++++. ..+....... .+.. +.+..++.++++++|+||++++
T Consensus 7 ~~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~~~~~~dL~~~~~~~~v~~-~~~t~d~~~al~gaDvVi~~ag 85 (326)
T 1smk_A 7 PGFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNAPGVTADISHMDTGAVVRG-FLGQQQLEAALTGMDLIIVPAG 85 (326)
T ss_dssp -CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSHHHHHHHHHTSCSSCEEEE-EESHHHHHHHHTTCSEEEECCC
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCcHhHHHHhhcccccceEEE-EeCCCCHHHHcCCCCEEEEcCC
Confidence 45799999999999999999999988 789998877652 1111111111 1111 3345678889999999999833
Q ss_pred -----ch---------------hhhcccccCCCEEEEecCc
Q 021854 173 -----GF---------------ISNAGSLKGVQHVILLSQL 193 (306)
Q Consensus 173 -----g~---------------~~~~a~~~gvkr~V~iSS~ 193 (306)
+. +.+.+.+.+.+.+|+++|.
T Consensus 86 ~~~~~g~~r~dl~~~N~~~~~~i~~~i~~~~p~~~viv~SN 126 (326)
T 1smk_A 86 VPRKPGMTRDDLFKINAGIVKTLCEGIAKCCPRAIVNLISN 126 (326)
T ss_dssp CCCCSSCCCSHHHHHHHHHHHHHHHHHHHHCTTSEEEECCS
T ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECC
Confidence 11 3344566778888888764
|
| >2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
Probab=98.17 E-value=4.4e-06 Score=73.20 Aligned_cols=72 Identities=13% Similarity=0.208 Sum_probs=52.7
Q ss_pred CCCeEEEEcC----------------CChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHH----HH
Q 021854 98 ARDAVLVTDG----------------DSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKK----FL 157 (306)
Q Consensus 98 ~~~~ilVtGa----------------tG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~----~l 157 (306)
.+++|||||| +|++|.++++.++++|++|+++.|..+.. ...+.++..+ |+...+ .+
T Consensus 2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~~-~~~~~~~~~~--~v~s~~em~~~v 78 (232)
T 2gk4_A 2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRALK-PEPHPNLSIR--EITNTKDLLIEM 78 (232)
T ss_dssp -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSCC-CCCCTTEEEE--ECCSHHHHHHHH
T ss_pred CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCcccc-ccCCCCeEEE--EHhHHHHHHHHH
Confidence 4799999999 99999999999999999999999976421 1112345444 555543 34
Q ss_pred HHHhcCccEEEEcCC
Q 021854 158 KTALRGVRSIICPSE 172 (306)
Q Consensus 158 ~~~~~~~d~vi~~~~ 172 (306)
.+.+.++|++|++++
T Consensus 79 ~~~~~~~Dili~aAA 93 (232)
T 2gk4_A 79 QERVQDYQVLIHSMA 93 (232)
T ss_dssp HHHGGGCSEEEECSB
T ss_pred HHhcCCCCEEEEcCc
Confidence 445678899999843
|
| >1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A | Back alignment and structure |
|---|
Probab=98.06 E-value=2.1e-06 Score=79.17 Aligned_cols=93 Identities=12% Similarity=0.058 Sum_probs=63.2
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCC-------eEEEEecC----cchhh----hhcCCCceeeeccCCCHHHHHHHhcC
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKRT-------RIKALVKD----KRNAM----ESFGTYVESMAGDASNKKFLKTALRG 163 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g~-------~V~~l~R~----~~~~~----~~~~~~v~~v~~D~~d~~~l~~~~~~ 163 (306)
.++|+||||+|++|+.++..|+..|+ +|+++.++ .+++. +.......+ ..|+....++.+++++
T Consensus 5 ~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~~~-~~~i~~~~~~~~al~~ 83 (329)
T 1b8p_A 5 PMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFPL-LAGMTAHADPMTAFKD 83 (329)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTCTT-EEEEEEESSHHHHTTT
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhcccc-cCcEEEecCcHHHhCC
Confidence 57999999999999999999998885 78888777 43321 111111111 2455555567889999
Q ss_pred ccEEEEcCC-----ch---------------hhhcccccC-CC-EEEEecC
Q 021854 164 VRSIICPSE-----GF---------------ISNAGSLKG-VQ-HVILLSQ 192 (306)
Q Consensus 164 ~d~vi~~~~-----g~---------------~~~~a~~~g-vk-r~V~iSS 192 (306)
+|+|||+++ +. +.+.+.+.+ .+ +||++|.
T Consensus 84 aD~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~SN 134 (329)
T 1b8p_A 84 ADVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVGN 134 (329)
T ss_dssp CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccC
Confidence 999999833 11 334455563 55 8888875
|
| >4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A | Back alignment and structure |
|---|
Probab=98.02 E-value=1.5e-05 Score=74.68 Aligned_cols=72 Identities=15% Similarity=0.162 Sum_probs=58.9
Q ss_pred CCeEEEEcCCChHHHHHHHHHH-HCCCeEEEEecCcchhh------------------hhcCCCceeeeccCCCHHHHHH
Q 021854 99 RDAVLVTDGDSDIGQMVILSLI-VKRTRIKALVKDKRNAM------------------ESFGTYVESMAGDASNKKFLKT 159 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~-~~g~~V~~l~R~~~~~~------------------~~~~~~v~~v~~D~~d~~~l~~ 159 (306)
+|++|||||+.++|.+.+..|+ ..|.+++++.|+.+... +..+.....+.+|++|.+.+++
T Consensus 50 pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d~e~i~~ 129 (401)
T 4ggo_A 50 PKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFSDEIKAQ 129 (401)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTSHHHHHH
T ss_pred CCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCCHHHHHH
Confidence 6999999999999999999998 68999999998765321 2235577899999999887776
Q ss_pred Hhc-------CccEEEEc
Q 021854 160 ALR-------GVRSIICP 170 (306)
Q Consensus 160 ~~~-------~~d~vi~~ 170 (306)
+++ ++|++||+
T Consensus 130 vi~~i~~~~G~IDiLVhS 147 (401)
T 4ggo_A 130 VIEEAKKKGIKFDLIVYS 147 (401)
T ss_dssp HHHHHHHTTCCEEEEEEC
T ss_pred HHHHHHHhcCCCCEEEEe
Confidence 654 57999998
|
| >1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A* | Back alignment and structure |
|---|
Probab=98.00 E-value=2.3e-05 Score=68.33 Aligned_cols=170 Identities=7% Similarity=0.075 Sum_probs=93.6
Q ss_pred cCCCeEEEEcC----------------CChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHH-
Q 021854 97 EARDAVLVTDG----------------DSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKT- 159 (306)
Q Consensus 97 ~~~~~ilVtGa----------------tG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~- 159 (306)
..+++|||||| +|++|.++++.|+++|++|+++.|... +. .+.+++ ..|+.+.+.+.+
T Consensus 6 l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~-l~--~~~g~~--~~dv~~~~~~~~~ 80 (226)
T 1u7z_A 6 LKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVS-LP--TPPFVK--RVDVMTALEMEAA 80 (226)
T ss_dssp TTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCC-CC--CCTTEE--EEECCSHHHHHHH
T ss_pred CCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCcc-cc--cCCCCe--EEccCcHHHHHHH
Confidence 45899999999 799999999999999999999988652 11 122333 568888655543
Q ss_pred ---HhcCccEEEEcCC--chhhhcccccCCCE-------E-E-EecC------cccccCCCC-cccccchHHHHHHHHHH
Q 021854 160 ---ALRGVRSIICPSE--GFISNAGSLKGVQH-------V-I-LLSQ------LSVYRGSGG-IQALMKGNARKLAEQDE 218 (306)
Q Consensus 160 ---~~~~~d~vi~~~~--g~~~~~a~~~gvkr-------~-V-~iSS------~~~~~~~~~-~~~~~~~~a~~~~~~aE 218 (306)
.+..+|++|++++ .+........++++ + + +.-. ......... .-.|.. ......+.+.
T Consensus 81 v~~~~~~~Dili~~Aav~d~~p~~~~~~KIkk~~~~~~~l~l~L~~~pdIL~~l~~~~~~~~~~VGFaa-Et~~l~e~A~ 159 (226)
T 1u7z_A 81 VNASVQQQNIFIGCAAVADYRAATVAPEKIKKQATQGDELTIKMVKNPDIVAGVAALKDHRPYVVGFAA-ETNNVEEYAR 159 (226)
T ss_dssp HHHHGGGCSEEEECCBCCSEEESSCCSSCC-------CEEEEEEEECCCHHHHHHHCSSSCCEEEEEEE-ESSSHHHHHH
T ss_pred HHHhcCCCCEEEECCcccCCCCccCChHHhccccccCCceEEEEeecHHHHHHHHhhhcCCcEEEEcch-hhchHHHHHH
Confidence 3567899999843 11111111222332 1 1 1111 100000011 111110 1111334556
Q ss_pred HHHHhcCCCEEEEEcCccc-CCCCCCc--ceeeec-CCCCccccCHHHHHHHHHHHhh
Q 021854 219 SMLMASGIPYTIIRTGVLQ-NTPGGKQ--GFQFEE-GCAANGSLSKEDAAFICVEALE 272 (306)
Q Consensus 219 ~~l~~sgi~~tiiRPg~l~-~~~~~~~--~~~~~~-g~~~~~~Is~~DVA~~iv~aL~ 272 (306)
.-|...++++++..+-.-. ...+... ...+.. +.......+.++||+.++..+.
T Consensus 160 ~kL~~k~~d~ivaN~~~~~~~~f~~~~n~v~li~~~~~~~~~~~sK~~vA~~I~~~i~ 217 (226)
T 1u7z_A 160 QKRIRKNLDLICANDVSQPTQGFNSDNNALHLFWQDGDKVLPLERKELLGQLLLDEIV 217 (226)
T ss_dssp HHHHHHTCSEEEEEECSSTTSSTTSSEEEEEEEETTEEEEEEEEEHHHHHHHHHHHHH
T ss_pred HHHHhcCCCEEEEeeccccCCccCCCceEEEEEeCCCcEecCCCCHHHHHHHHHHHHH
Confidence 6688899999999986421 1222222 112221 2222445678999998888764
|
| >2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.93 E-value=2.3e-05 Score=72.27 Aligned_cols=94 Identities=13% Similarity=0.049 Sum_probs=62.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHH----HHHhc-CccEEEEcCC
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFL----KTALR-GVRSIICPSE 172 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l----~~~~~-~~d~vi~~~~ 172 (306)
++++|+|+||+|+||..+++.+...|++|+++.|++++.......+.. ...|+.+.+++ .++.. ++|++|.+++
T Consensus 169 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~~~g~~-~~~d~~~~~~~~~~~~~~~~~~~D~vi~~~g 247 (347)
T 2hcy_A 169 AGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRSIGGE-VFIDFTKEKDIVGAVLKATDGGAHGVINVSV 247 (347)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHHTTCC-EEEETTTCSCHHHHHHHHHTSCEEEEEECSS
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHHHcCCc-eEEecCccHhHHHHHHHHhCCCCCEEEECCC
Confidence 578999999999999999999999999999999988764322111222 22466643333 33322 6899999855
Q ss_pred c-hh----hhcccccCCCEEEEecCcc
Q 021854 173 G-FI----SNAGSLKGVQHVILLSQLS 194 (306)
Q Consensus 173 g-~~----~~~a~~~gvkr~V~iSS~~ 194 (306)
+ .. .+.++.. .++|.+++..
T Consensus 248 ~~~~~~~~~~~l~~~--G~iv~~g~~~ 272 (347)
T 2hcy_A 248 SEAAIEASTRYVRAN--GTTVLVGMPA 272 (347)
T ss_dssp CHHHHHHHTTSEEEE--EEEEECCCCT
T ss_pred cHHHHHHHHHHHhcC--CEEEEEeCCC
Confidence 4 22 2233333 4888887653
|
| >3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A* | Back alignment and structure |
|---|
Probab=97.89 E-value=3.2e-05 Score=73.46 Aligned_cols=74 Identities=16% Similarity=0.154 Sum_probs=64.4
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHH-hcCccEEEEcCCc
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA-LRGVRSIICPSEG 173 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~-~~~~d~vi~~~~g 173 (306)
.++|+|.|+ |.+|+.+++.|.+.|++|+++.++++........++.++.+|.++.+.++++ ++++|+||.+.+.
T Consensus 4 ~~~viIiG~-Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~~g~~vi~GDat~~~~L~~agi~~A~~viv~~~~ 78 (413)
T 3l9w_A 4 GMRVIIAGF-GRFGQITGRLLLSSGVKMVVLDHDPDHIETLRKFGMKVFYGDATRMDLLESAGAAKAEVLINAIDD 78 (413)
T ss_dssp CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHHTTCCCEESCTTCHHHHHHTTTTTCSEEEECCSS
T ss_pred CCeEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHhCCCeEEEcCCCCHHHHHhcCCCccCEEEECCCC
Confidence 478999998 9999999999999999999999999886544445688999999999999887 7889999988553
|
| >1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A* | Back alignment and structure |
|---|
Probab=97.82 E-value=3.1e-05 Score=70.78 Aligned_cols=89 Identities=9% Similarity=0.024 Sum_probs=58.0
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCC--eEEEEec--Ccchhhh----h---cC---CCceeeeccCCCHHHHHHHhcCcc
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVKRT--RIKALVK--DKRNAME----S---FG---TYVESMAGDASNKKFLKTALRGVR 165 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~g~--~V~~l~R--~~~~~~~----~---~~---~~v~~v~~D~~d~~~l~~~~~~~d 165 (306)
++|+||||+|++|+.++..|+..+. ++.++.+ +.+++.. . .+ ..+++...+ +++.++++++|
T Consensus 1 mKI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~----d~l~~al~gaD 76 (313)
T 1hye_A 1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVES----DENLRIIDESD 76 (313)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEE----TTCGGGGTTCS
T ss_pred CEEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhHHhcCCCeEEEeCC----cchHHHhCCCC
Confidence 5899999999999999999998885 5666666 4432211 0 11 112222111 23566799999
Q ss_pred EEEEcCC-----ch---------------hhhcccccCCCEEEEecCc
Q 021854 166 SIICPSE-----GF---------------ISNAGSLKGVQHVILLSQL 193 (306)
Q Consensus 166 ~vi~~~~-----g~---------------~~~~a~~~gvkr~V~iSS~ 193 (306)
+|||+++ +. +.+++++.+ +.+|+++|.
T Consensus 77 ~Vi~~Ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~-~~~vlv~SN 123 (313)
T 1hye_A 77 VVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEIC-DTKIFVITN 123 (313)
T ss_dssp EEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC-CCEEEECSS
T ss_pred EEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhC-CeEEEEecC
Confidence 9999833 11 345566777 888888774
|
| >3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A* | Back alignment and structure |
|---|
Probab=97.79 E-value=6.6e-05 Score=68.74 Aligned_cols=75 Identities=8% Similarity=0.080 Sum_probs=58.9
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEecC---cchhhhhc---C--CCceeeeccCCCHHHHHHHhcCccEE
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKD---KRNAMESF---G--TYVESMAGDASNKKFLKTALRGVRSI 167 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~l~R~---~~~~~~~~---~--~~v~~v~~D~~d~~~l~~~~~~~d~v 167 (306)
..+++++|+|| |++|+.++..|++.|. +|+++.|+ .+++++.. . ..+.+...++.+.+.+.+.+.++|+|
T Consensus 152 l~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~~~l~~aDiI 230 (315)
T 3tnl_A 152 IIGKKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLRKEIAESVIF 230 (315)
T ss_dssp CTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHTCSEE
T ss_pred ccCCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccchHHHHHhhhcCCCEE
Confidence 45799999998 8999999999999998 89999999 55543321 1 12345556788888888889999999
Q ss_pred EEcCC
Q 021854 168 ICPSE 172 (306)
Q Consensus 168 i~~~~ 172 (306)
|++++
T Consensus 231 INaTp 235 (315)
T 3tnl_A 231 TNATG 235 (315)
T ss_dssp EECSS
T ss_pred EECcc
Confidence 99843
|
| >1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A | Back alignment and structure |
|---|
Probab=97.77 E-value=1.8e-05 Score=72.06 Aligned_cols=88 Identities=8% Similarity=0.115 Sum_probs=58.7
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCC--eEEEEec--Ccchhhh-------h--cCCCceeeeccCCCHHHHHHHhcCccE
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVKRT--RIKALVK--DKRNAME-------S--FGTYVESMAGDASNKKFLKTALRGVRS 166 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~g~--~V~~l~R--~~~~~~~-------~--~~~~v~~v~~D~~d~~~l~~~~~~~d~ 166 (306)
++|+||||+|++|+.++..|+..+. ++.++.+ +.+++.. . +...+++.. + + .++++++|+
T Consensus 1 mKI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~-~--~----~~a~~~aDv 73 (303)
T 1o6z_A 1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQ-G--G----YEDTAGSDV 73 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEE-C--C----GGGGTTCSE
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEe-C--C----HHHhCCCCE
Confidence 5899999999999999999998885 5777766 5443211 0 112233332 1 2 456899999
Q ss_pred EEEcCC-----ch---------------hhhcccccCCCEEEEecCcc
Q 021854 167 IICPSE-----GF---------------ISNAGSLKGVQHVILLSQLS 194 (306)
Q Consensus 167 vi~~~~-----g~---------------~~~~a~~~gvkr~V~iSS~~ 194 (306)
|||+++ +. +.+.+.+.+.+.+|+++|.-
T Consensus 74 Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~p~~~viv~SNP 121 (303)
T 1o6z_A 74 VVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTSNP 121 (303)
T ss_dssp EEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTTCSCCEEEECCSS
T ss_pred EEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEeCCh
Confidence 999833 11 33456667888888887643
|
| >1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A* | Back alignment and structure |
|---|
Probab=97.73 E-value=4e-05 Score=70.16 Aligned_cols=95 Identities=15% Similarity=0.068 Sum_probs=62.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHH----HHHHHh-cCccEEEEcCC
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKK----FLKTAL-RGVRSIICPSE 172 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~----~l~~~~-~~~d~vi~~~~ 172 (306)
.+++|+|+||+|+||..+++.+...|++|+++.|+.++.......+.. ...|+.+.+ .+.+.. .++|++|++++
T Consensus 145 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~g~~-~~~d~~~~~~~~~~~~~~~~~~~d~vi~~~g 223 (333)
T 1v3u_A 145 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQIGFD-AAFNYKTVNSLEEALKKASPDGYDCYFDNVG 223 (333)
T ss_dssp SSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCS-EEEETTSCSCHHHHHHHHCTTCEEEEEESSC
T ss_pred CCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCc-EEEecCCHHHHHHHHHHHhCCCCeEEEECCC
Confidence 578999999999999999999999999999999987664322111222 234665522 233322 36899999866
Q ss_pred chhh----hcccccCCCEEEEecCccc
Q 021854 173 GFIS----NAGSLKGVQHVILLSQLSV 195 (306)
Q Consensus 173 g~~~----~~a~~~gvkr~V~iSS~~~ 195 (306)
+... +.++.. .++|+++....
T Consensus 224 ~~~~~~~~~~l~~~--G~~v~~g~~~~ 248 (333)
T 1v3u_A 224 GEFLNTVLSQMKDF--GKIAICGAISV 248 (333)
T ss_dssp HHHHHHHHTTEEEE--EEEEECCCCC-
T ss_pred hHHHHHHHHHHhcC--CEEEEEecccc
Confidence 4322 222222 47888876543
|
| >1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A | Back alignment and structure |
|---|
Probab=97.68 E-value=6.1e-05 Score=69.15 Aligned_cols=87 Identities=15% Similarity=0.087 Sum_probs=69.3
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHH-hcCccEEEEcCCch---
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA-LRGVRSIICPSEGF--- 174 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~-~~~~d~vi~~~~g~--- 174 (306)
.++++|.|+ |.+|+.++++|.+.|+ |+++.+++++.. ....++.++.+|.+|++.++++ ++++|.++.+.+..
T Consensus 115 ~~~viI~G~-G~~g~~l~~~L~~~g~-v~vid~~~~~~~-~~~~~~~~i~gd~~~~~~L~~a~i~~a~~vi~~~~~d~~n 191 (336)
T 1lnq_A 115 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKK-VLRSGANFVHGDPTRVSDLEKANVRGARAVIVDLESDSET 191 (336)
T ss_dssp -CEEEEESC-CHHHHHHHTTGGGSCE-EEEESCGGGHHH-HHHTTCEEEESCTTSHHHHHHTCSTTEEEEEECCSSHHHH
T ss_pred cCCEEEECC-cHHHHHHHHHHHhCCc-EEEEeCChhhhh-HHhCCcEEEEeCCCCHHHHHhcChhhccEEEEcCCccHHH
Confidence 468999998 9999999999999999 999999988766 4345789999999999999988 88999999885432
Q ss_pred --hhhcccccCCC-EEE
Q 021854 175 --ISNAGSLKGVQ-HVI 188 (306)
Q Consensus 175 --~~~~a~~~gvk-r~V 188 (306)
....+++.+.+ ++|
T Consensus 192 ~~~~~~ar~~~~~~~ii 208 (336)
T 1lnq_A 192 IHCILGIRKIDESVRII 208 (336)
T ss_dssp HHHHHHHHTTCTTSEEE
T ss_pred HHHHHHHHHHCCCCeEE
Confidence 23345555554 444
|
| >2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=97.67 E-value=5.5e-05 Score=70.68 Aligned_cols=71 Identities=13% Similarity=0.163 Sum_probs=58.3
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhh---hcCCCceeeeccCCCHHHHHHHhcCccEEEEcC
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALRGVRSIICPS 171 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~---~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~ 171 (306)
..+++|+|+|+ |.||+.+++.+...|++|+++.|++++... .++.. +..|..+.+.+.++++++|+||+++
T Consensus 164 l~~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~g~~---~~~~~~~~~~l~~~~~~~DvVi~~~ 237 (369)
T 2eez_A 164 VAPASVVILGG-GTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVFGGR---VITLTATEANIKKSVQHADLLIGAV 237 (369)
T ss_dssp BCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTS---EEEEECCHHHHHHHHHHCSEEEECC
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCce---EEEecCCHHHHHHHHhCCCEEEECC
Confidence 45699999999 999999999999999999999999876432 23322 4567778888999999999999884
|
| >1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A* | Back alignment and structure |
|---|
Probab=97.63 E-value=1.2e-05 Score=68.61 Aligned_cols=72 Identities=11% Similarity=0.021 Sum_probs=50.6
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCC-Cceeee-ccCCCHHHHHHHhcCccEEEEcCCc
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGT-YVESMA-GDASNKKFLKTALRGVRSIICPSEG 173 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~-~v~~v~-~D~~d~~~l~~~~~~~d~vi~~~~g 173 (306)
|+|+|+||+|.+|+.+++.|++.|++|+++.|++++....... +. .+. .|+. ..++.++++++|+||++.+.
T Consensus 1 m~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~D~Vi~~~~~ 74 (212)
T 1jay_A 1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRR-IAGDASIT-GMKNEDAAEACDIAVLTIPW 74 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHH-HHSSCCEE-EEEHHHHHHHCSEEEECSCH
T ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcc-ccccCCCC-hhhHHHHHhcCCEEEEeCCh
Confidence 4799999899999999999999999999999988764322110 00 000 1222 13455677889999998553
|
| >1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP} | Back alignment and structure |
|---|
Probab=97.63 E-value=6.6e-05 Score=68.73 Aligned_cols=92 Identities=12% Similarity=0.113 Sum_probs=62.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhh--hcCCCceeeeccCCCH---HHHHHHh--cCccEEEEc
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME--SFGTYVESMAGDASNK---KFLKTAL--RGVRSIICP 170 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~--~~~~~v~~v~~D~~d~---~~l~~~~--~~~d~vi~~ 170 (306)
.+++|+|+||+|+||..+++.+...|++|+++.|+.++.+. .++. . ...|..+. +.+.+.. .++|++|.+
T Consensus 145 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~g~--~-~~~d~~~~~~~~~i~~~~~~~~~d~vi~~ 221 (333)
T 1wly_A 145 PGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARKLGC--H-HTINYSTQDFAEVVREITGGKGVDVVYDS 221 (333)
T ss_dssp TTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTC--S-EEEETTTSCHHHHHHHHHTTCCEEEEEEC
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCC--C-EEEECCCHHHHHHHHHHhCCCCCeEEEEC
Confidence 57899999999999999999999999999999998866332 2332 2 12355543 3344444 368999998
Q ss_pred CCchhh----hcccccCCCEEEEecCcc
Q 021854 171 SEGFIS----NAGSLKGVQHVILLSQLS 194 (306)
Q Consensus 171 ~~g~~~----~~a~~~gvkr~V~iSS~~ 194 (306)
+++... +.++.. .++|.++...
T Consensus 222 ~g~~~~~~~~~~l~~~--G~iv~~g~~~ 247 (333)
T 1wly_A 222 IGKDTLQKSLDCLRPR--GMCAAYGHAS 247 (333)
T ss_dssp SCTTTHHHHHHTEEEE--EEEEECCCTT
T ss_pred CcHHHHHHHHHhhccC--CEEEEEecCC
Confidence 554322 223333 4788887643
|
| >1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=97.62 E-value=4.8e-05 Score=69.43 Aligned_cols=92 Identities=11% Similarity=0.035 Sum_probs=62.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhh--hcCCCceeeeccCCCHH---HHHHHhc--CccEEEEc
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME--SFGTYVESMAGDASNKK---FLKTALR--GVRSIICP 170 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~--~~~~~v~~v~~D~~d~~---~l~~~~~--~~d~vi~~ 170 (306)
.+++|+|+||+|+||..+++.+...|++|+++.|++++... .++. . ...|..+.+ .+.+... ++|++|.+
T Consensus 140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~g~--~-~~~~~~~~~~~~~~~~~~~~~~~D~vi~~ 216 (327)
T 1qor_A 140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALKAGA--W-QVINYREEDLVERLKEITGGKKVRVVYDS 216 (327)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTC--S-EEEETTTSCHHHHHHHHTTTCCEEEEEEC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCC--C-EEEECCCccHHHHHHHHhCCCCceEEEEC
Confidence 47899999999999999999999999999999998766332 2232 2 224555433 3333332 58999998
Q ss_pred CCchhh----hcccccCCCEEEEecCcc
Q 021854 171 SEGFIS----NAGSLKGVQHVILLSQLS 194 (306)
Q Consensus 171 ~~g~~~----~~a~~~gvkr~V~iSS~~ 194 (306)
+++... +.++.. .++|.+++..
T Consensus 217 ~g~~~~~~~~~~l~~~--G~iv~~g~~~ 242 (327)
T 1qor_A 217 VGRDTWERSLDCLQRR--GLMVSFGNSS 242 (327)
T ss_dssp SCGGGHHHHHHTEEEE--EEEEECCCTT
T ss_pred CchHHHHHHHHHhcCC--CEEEEEecCC
Confidence 654322 223333 4788887653
|
| >2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A | Back alignment and structure |
|---|
Probab=97.57 E-value=0.0001 Score=68.49 Aligned_cols=90 Identities=13% Similarity=0.032 Sum_probs=56.9
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCC------CeEEEEecCc--ch-hhhhcCC--C-ceeeeccCCCHHHHHHHhcCccE
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKR------TRIKALVKDK--RN-AMESFGT--Y-VESMAGDASNKKFLKTALRGVRS 166 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g------~~V~~l~R~~--~~-~~~~~~~--~-v~~v~~D~~d~~~l~~~~~~~d~ 166 (306)
+++|+|.||||.+|+++++.|++++ .+++++.+.. .+ .....+. . .+....|+ +.+ .+.++|+
T Consensus 9 m~kVaIvGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s~~~agk~~~~~~~~l~~~~~~~~~~~-~~~----~~~~~Dv 83 (352)
T 2nqt_A 9 ATKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTAATSAGSTLGEHHPHLTPLAHRVVEPT-EAA----VLGGHDA 83 (352)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEESSCTTSBGGGTCTTCGGGTTCBCEEC-CHH----HHTTCSE
T ss_pred CCEEEEECCCCHHHHHHHHHHHcCCCCCCccEEEEEEECCCcCCCchhhhcccccccceeeeccC-CHH----HhcCCCE
Confidence 4699999999999999999999887 3777776433 22 2222221 1 11111233 322 3569999
Q ss_pred EEEcCCch----hhhcccccCCCEEEEecCccc
Q 021854 167 IICPSEGF----ISNAGSLKGVQHVILLSQLSV 195 (306)
Q Consensus 167 vi~~~~g~----~~~~a~~~gvkr~V~iSS~~~ 195 (306)
||++.+.. +...+ +.|+ ++|-+|+..-
T Consensus 84 Vf~alg~~~s~~~~~~~-~~G~-~vIDlSa~~R 114 (352)
T 2nqt_A 84 VFLALPHGHSAVLAQQL-SPET-LIIDCGADFR 114 (352)
T ss_dssp EEECCTTSCCHHHHHHS-CTTS-EEEECSSTTT
T ss_pred EEECCCCcchHHHHHHH-hCCC-EEEEECCCcc
Confidence 99985532 34445 6675 6888887653
|
| >4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=97.57 E-value=8.3e-05 Score=71.60 Aligned_cols=92 Identities=13% Similarity=0.125 Sum_probs=71.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcC-CCceeeeccCCCHHHHHHH-hcCccEEEEcCCch-
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG-TYVESMAGDASNKKFLKTA-LRGVRSIICPSEGF- 174 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~-~~v~~v~~D~~d~~~l~~~-~~~~d~vi~~~~g~- 174 (306)
+.|+|+|.|+ |.+|+.++++|...|++|+++.++++....... -++.++.+|.++++.++++ ++.+|.+|.+++.-
T Consensus 2 ~~M~iiI~G~-G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~i~Gd~~~~~~L~~Agi~~ad~~ia~t~~De 80 (461)
T 4g65_A 2 NAMKIIILGA-GQVGGTLAENLVGENNDITIVDKDGDRLRELQDKYDLRVVNGHASHPDVLHEAGAQDADMLVAVTNTDE 80 (461)
T ss_dssp CCEEEEEECC-SHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHSSCEEEESCTTCHHHHHHHTTTTCSEEEECCSCHH
T ss_pred CcCEEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhcCcEEEEEcCCCHHHHHhcCCCcCCEEEEEcCChH
Confidence 3689999999 999999999999999999999999987554322 2588999999999999887 68899999875542
Q ss_pred ----hhhcccc-cCCCEEEEe
Q 021854 175 ----ISNAGSL-KGVQHVILL 190 (306)
Q Consensus 175 ----~~~~a~~-~gvkr~V~i 190 (306)
....|++ .+++++|--
T Consensus 81 ~Nl~~~~~Ak~~~~~~~~iar 101 (461)
T 4g65_A 81 TNMAACQVAFTLFNTPNRIAR 101 (461)
T ss_dssp HHHHHHHHHHHHHCCSSEEEE
T ss_pred HHHHHHHHHHHhcCCccceeE
Confidence 2233444 366665543
|
| >4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A* | Back alignment and structure |
|---|
Probab=97.54 E-value=0.00012 Score=67.05 Aligned_cols=96 Identities=16% Similarity=0.158 Sum_probs=63.8
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh-cCCCceeeeccCCCHH---HHHHHh-cCccEEEEcC
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-FGTYVESMAGDASNKK---FLKTAL-RGVRSIICPS 171 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~-~~~~v~~v~~D~~d~~---~l~~~~-~~~d~vi~~~ 171 (306)
.++++|||+||+|+||..+++.+...|++|+++.|++++.+.. ..-+... ..|..+.+ .+.+.. .++|++|.++
T Consensus 148 ~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~d~vi~~~ 226 (336)
T 4b7c_A 148 KNGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEELGFDG-AIDYKNEDLAAGLKRECPKGIDVFFDNV 226 (336)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCCSE-EEETTTSCHHHHHHHHCTTCEEEEEESS
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCCE-EEECCCHHHHHHHHHhcCCCceEEEECC
Confidence 3578999999999999999999999999999999988775432 1222222 23554432 233322 3689999986
Q ss_pred Cchhh----hcccccCCCEEEEecCccc
Q 021854 172 EGFIS----NAGSLKGVQHVILLSQLSV 195 (306)
Q Consensus 172 ~g~~~----~~a~~~gvkr~V~iSS~~~ 195 (306)
++... +..+.. .++|.++....
T Consensus 227 g~~~~~~~~~~l~~~--G~iv~~G~~~~ 252 (336)
T 4b7c_A 227 GGEILDTVLTRIAFK--ARIVLCGAISQ 252 (336)
T ss_dssp CHHHHHHHHTTEEEE--EEEEECCCGGG
T ss_pred CcchHHHHHHHHhhC--CEEEEEeeccc
Confidence 64322 223333 47888876653
|
| >1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D | Back alignment and structure |
|---|
Probab=97.51 E-value=0.00022 Score=64.28 Aligned_cols=93 Identities=12% Similarity=0.077 Sum_probs=60.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcCCchhh-
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEGFIS- 176 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~g~~~- 176 (306)
.+++|+|+||+|.+|..+++.+...|++|+++.|++++.+....-+... ..|..+.+.+.+.++++|++|. .++...
T Consensus 125 ~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~-~~~~~~~~~~~~~~~~~d~vid-~g~~~~~ 202 (302)
T 1iz0_A 125 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLALGAEE-AATYAEVPERAKAWGGLDLVLE-VRGKEVE 202 (302)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHHTTCSE-EEEGGGHHHHHHHTTSEEEEEE-CSCTTHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCCE-EEECCcchhHHHHhcCceEEEE-CCHHHHH
Confidence 5789999999999999999998899999999999887643221112222 2355541334444588999999 765322
Q ss_pred ---hcccccCCCEEEEecCcc
Q 021854 177 ---NAGSLKGVQHVILLSQLS 194 (306)
Q Consensus 177 ---~~a~~~gvkr~V~iSS~~ 194 (306)
+.++.. .++|.++...
T Consensus 203 ~~~~~l~~~--G~~v~~g~~~ 221 (302)
T 1iz0_A 203 ESLGLLAHG--GRLVYIGAAE 221 (302)
T ss_dssp HHHTTEEEE--EEEEEC----
T ss_pred HHHHhhccC--CEEEEEeCCC
Confidence 222333 3788876543
|
| >2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=97.50 E-value=0.00014 Score=66.80 Aligned_cols=92 Identities=14% Similarity=0.172 Sum_probs=63.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhh--hcCCCceeeeccCCCH---HHHHHHhc--CccEEEEc
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME--SFGTYVESMAGDASNK---KFLKTALR--GVRSIICP 170 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~--~~~~~v~~v~~D~~d~---~~l~~~~~--~~d~vi~~ 170 (306)
.+++|||+||+|.+|..+++.+...|++|+++.|++++.+. .++ ... ..|..+. +.+.+... ++|++|.+
T Consensus 166 ~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~g--a~~-~~d~~~~~~~~~~~~~~~~~~~d~vi~~ 242 (343)
T 2eih_A 166 PGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAKALG--ADE-TVNYTHPDWPKEVRRLTGGKGADKVVDH 242 (343)
T ss_dssp TTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHT--CSE-EEETTSTTHHHHHHHHTTTTCEEEEEES
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcC--CCE-EEcCCcccHHHHHHHHhCCCCceEEEEC
Confidence 57899999999999999999999999999999998876432 233 222 2466543 33444443 68999988
Q ss_pred CCch----hhhcccccCCCEEEEecCcc
Q 021854 171 SEGF----ISNAGSLKGVQHVILLSQLS 194 (306)
Q Consensus 171 ~~g~----~~~~a~~~gvkr~V~iSS~~ 194 (306)
+++. ..+.++.. .++|.+++..
T Consensus 243 ~g~~~~~~~~~~l~~~--G~~v~~g~~~ 268 (343)
T 2eih_A 243 TGALYFEGVIKATANG--GRIAIAGASS 268 (343)
T ss_dssp SCSSSHHHHHHHEEEE--EEEEESSCCC
T ss_pred CCHHHHHHHHHhhccC--CEEEEEecCC
Confidence 5543 22333333 3898887654
|
| >2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A* | Back alignment and structure |
|---|
Probab=97.46 E-value=0.00013 Score=66.94 Aligned_cols=94 Identities=13% Similarity=0.078 Sum_probs=61.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhc-CCCceeeeccCCCH----HHHHHHh-cCccEEEEcC
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF-GTYVESMAGDASNK----KFLKTAL-RGVRSIICPS 171 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~-~~~v~~v~~D~~d~----~~l~~~~-~~~d~vi~~~ 171 (306)
.+++|+|+||+|+||..+++.+...|++|+++.|+.++.+... .-+... ..|+.+. +.+.+.. .++|++|.++
T Consensus 155 ~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~g~~~-~~d~~~~~~~~~~~~~~~~~~~d~vi~~~ 233 (345)
T 2j3h_A 155 EGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKFGFDD-AFNYKEESDLTAALKRCFPNGIDIYFENV 233 (345)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTSCCSE-EEETTSCSCSHHHHHHHCTTCEEEEEESS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCce-EEecCCHHHHHHHHHHHhCCCCcEEEECC
Confidence 5789999999999999999999999999999999887643221 112222 2355542 2333332 3689999986
Q ss_pred Cchhh----hcccccCCCEEEEecCcc
Q 021854 172 EGFIS----NAGSLKGVQHVILLSQLS 194 (306)
Q Consensus 172 ~g~~~----~~a~~~gvkr~V~iSS~~ 194 (306)
++... +..... .++|.++...
T Consensus 234 g~~~~~~~~~~l~~~--G~~v~~G~~~ 258 (345)
T 2j3h_A 234 GGKMLDAVLVNMNMH--GRIAVCGMIS 258 (345)
T ss_dssp CHHHHHHHHTTEEEE--EEEEECCCGG
T ss_pred CHHHHHHHHHHHhcC--CEEEEEcccc
Confidence 54322 222333 4788887644
|
| >2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A* | Back alignment and structure |
|---|
Probab=97.45 E-value=0.00014 Score=67.37 Aligned_cols=92 Identities=17% Similarity=0.130 Sum_probs=62.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhh--hcCCCceeeeccCCCH---HHHHHHhc--CccEEEEc
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME--SFGTYVESMAGDASNK---KFLKTALR--GVRSIICP 170 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~--~~~~~v~~v~~D~~d~---~~l~~~~~--~~d~vi~~ 170 (306)
.+++|+|+||+|+||..+++.+...|++|+++.|+.++.+. .++. . ...|..+. +.+.+... ++|++|.+
T Consensus 162 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~g~--~-~~~~~~~~~~~~~~~~~~~~~~~d~vi~~ 238 (354)
T 2j8z_A 162 AGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAEKLGA--A-AGFNYKKEDFSEATLKFTKGAGVNLILDC 238 (354)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTC--S-EEEETTTSCHHHHHHHHTTTSCEEEEEES
T ss_pred CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCC--c-EEEecCChHHHHHHHHHhcCCCceEEEEC
Confidence 47899999999999999999999999999999998876432 2332 2 22455543 33444443 68999998
Q ss_pred CCchhh----hcccccCCCEEEEecCcc
Q 021854 171 SEGFIS----NAGSLKGVQHVILLSQLS 194 (306)
Q Consensus 171 ~~g~~~----~~a~~~gvkr~V~iSS~~ 194 (306)
+++... +.++.. .++|.++...
T Consensus 239 ~G~~~~~~~~~~l~~~--G~iv~~G~~~ 264 (354)
T 2j8z_A 239 IGGSYWEKNVNCLALD--GRWVLYGLMG 264 (354)
T ss_dssp SCGGGHHHHHHHEEEE--EEEEECCCTT
T ss_pred CCchHHHHHHHhccCC--CEEEEEeccC
Confidence 665322 222222 4788887543
|
| >1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A* | Back alignment and structure |
|---|
Probab=97.42 E-value=0.00076 Score=62.60 Aligned_cols=93 Identities=9% Similarity=0.075 Sum_probs=65.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhc-CCCceeeeccCCCHHHHHHHhcCccEEEEcCCch--
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF-GTYVESMAGDASNKKFLKTALRGVRSIICPSEGF-- 174 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~-~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~g~-- 174 (306)
.+++|+|+|+ |.||..+++.+...|++|+++.+++++..... .-+... ..|..+.+.+.++..++|+||.+.++.
T Consensus 187 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~lGa~~-v~~~~~~~~~~~~~~~~D~vid~~g~~~~ 264 (366)
T 1yqd_A 187 PGKHIGIVGL-GGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGADS-FLVSRDQEQMQAAAGTLDGIIDTVSAVHP 264 (366)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTSCCSE-EEETTCHHHHHHTTTCEEEEEECCSSCCC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCce-EEeccCHHHHHHhhCCCCEEEECCCcHHH
Confidence 6789999997 99999999998889999999999887743321 112222 346777777777778899999884432
Q ss_pred h---hhcccccCCCEEEEecCcc
Q 021854 175 I---SNAGSLKGVQHVILLSQLS 194 (306)
Q Consensus 175 ~---~~~a~~~gvkr~V~iSS~~ 194 (306)
+ .+.++.. .++|.+++..
T Consensus 265 ~~~~~~~l~~~--G~iv~~g~~~ 285 (366)
T 1yqd_A 265 LLPLFGLLKSH--GKLILVGAPE 285 (366)
T ss_dssp SHHHHHHEEEE--EEEEECCCCS
T ss_pred HHHHHHHHhcC--CEEEEEccCC
Confidence 2 2233333 4788887643
|
| >2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1 | Back alignment and structure |
|---|
Probab=97.41 E-value=0.00025 Score=65.53 Aligned_cols=89 Identities=18% Similarity=0.165 Sum_probs=54.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCC---eEEEEec--CcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcCC
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRT---RIKALVK--DKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE 172 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~---~V~~l~R--~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~ 172 (306)
|+++|+|.||+|.+|+++++.|.++++ +++++.. +..+... +. +.++...|. |.+ .++++|+||.+.+
T Consensus 5 m~~kV~IiGAtG~iG~~llr~L~~~~~~~~elv~i~s~~~~g~~~~-~~-g~~i~~~~~-~~~----~~~~~DvV~~a~g 77 (340)
T 2hjs_A 5 QPLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQRMG-FA-ESSLRVGDV-DSF----DFSSVGLAFFAAA 77 (340)
T ss_dssp CCCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTCEEE-ET-TEEEECEEG-GGC----CGGGCSEEEECSC
T ss_pred CCcEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEEecCCCCCCccc-cC-CcceEEecC-CHH----HhcCCCEEEEcCC
Confidence 347899999999999999999997654 5565542 2212111 11 112211222 111 2578999999876
Q ss_pred ch----hhhcccccCCCEEEEecCcc
Q 021854 173 GF----ISNAGSLKGVQHVILLSQLS 194 (306)
Q Consensus 173 g~----~~~~a~~~gvkr~V~iSS~~ 194 (306)
.. ....+.++|++ +|.+|+..
T Consensus 78 ~~~s~~~a~~~~~aG~k-vId~Sa~~ 102 (340)
T 2hjs_A 78 AEVSRAHAERARAAGCS-VIDLSGAL 102 (340)
T ss_dssp HHHHHHHHHHHHHTTCE-EEETTCTT
T ss_pred cHHHHHHHHHHHHCCCE-EEEeCCCC
Confidence 54 33445567875 67777754
|
| >1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=97.37 E-value=0.0003 Score=64.98 Aligned_cols=92 Identities=14% Similarity=0.055 Sum_probs=61.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCH---HHHHHHhc--CccEEEEcCC
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNK---KFLKTALR--GVRSIICPSE 172 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~---~~l~~~~~--~~d~vi~~~~ 172 (306)
.+++|+|+||+|++|..+++.+...|++|+++.|++++.......+.. ...|..+. +.+.+... ++|++|.+++
T Consensus 170 ~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~-~~~d~~~~~~~~~~~~~~~~~~~D~vi~~~G 248 (351)
T 1yb5_A 170 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQNGAH-EVFNHREVNYIDKIKKYVGEKGIDIIIEMLA 248 (351)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCS-EEEETTSTTHHHHHHHHHCTTCEEEEEESCH
T ss_pred CcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHcCCC-EEEeCCCchHHHHHHHHcCCCCcEEEEECCC
Confidence 578999999999999999999999999999999988764322111222 22455543 33444443 6899998855
Q ss_pred chhh----hcccccCCCEEEEecC
Q 021854 173 GFIS----NAGSLKGVQHVILLSQ 192 (306)
Q Consensus 173 g~~~----~~a~~~gvkr~V~iSS 192 (306)
+... +..... .++|.++.
T Consensus 249 ~~~~~~~~~~l~~~--G~iv~~g~ 270 (351)
T 1yb5_A 249 NVNLSKDLSLLSHG--GRVIVVGS 270 (351)
T ss_dssp HHHHHHHHHHEEEE--EEEEECCC
T ss_pred hHHHHHHHHhccCC--CEEEEEec
Confidence 4322 222222 47888764
|
| >3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A* | Back alignment and structure |
|---|
Probab=97.35 E-value=0.0005 Score=62.78 Aligned_cols=75 Identities=9% Similarity=0.084 Sum_probs=56.0
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEecC---cchhhhh---cC--CCceeeeccCCCHHHHHHHhcCccEE
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKD---KRNAMES---FG--TYVESMAGDASNKKFLKTALRGVRSI 167 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~l~R~---~~~~~~~---~~--~~v~~v~~D~~d~~~l~~~~~~~d~v 167 (306)
..+++++|+|| |++|+.++..|++.|. +|++..|+ .+++++. +. ....+...++.+.+.+.+.+.++|+|
T Consensus 146 l~gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~~l~~~~~~l~~~DiI 224 (312)
T 3t4e_A 146 MRGKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLADQHAFTEALASADIL 224 (312)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHHCSEE
T ss_pred cCCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccCcceEEechHhhhhhHhhccCceEE
Confidence 35789999998 9999999999999998 89999999 5554332 11 12334455666755556778889999
Q ss_pred EEcCC
Q 021854 168 ICPSE 172 (306)
Q Consensus 168 i~~~~ 172 (306)
|++++
T Consensus 225 INaTp 229 (312)
T 3t4e_A 225 TNGTK 229 (312)
T ss_dssp EECSS
T ss_pred EECCc
Confidence 99843
|
| >2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A* | Back alignment and structure |
|---|
Probab=97.35 E-value=0.00041 Score=59.66 Aligned_cols=66 Identities=11% Similarity=0.122 Sum_probs=50.7
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcCCc
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG 173 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~g 173 (306)
+++|+|+| +|.+|+.+++.|.+.|++|+++.|+.++.......++... ++.++++++|+||.+.+.
T Consensus 28 ~~~I~iiG-~G~~G~~la~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~~--------~~~~~~~~~DvVi~av~~ 93 (215)
T 2vns_A 28 APKVGILG-SGDFARSLATRLVGSGFKVVVGSRNPKRTARLFPSAAQVT--------FQEEAVSSPEVIFVAVFR 93 (215)
T ss_dssp -CCEEEEC-CSHHHHHHHHHHHHTTCCEEEEESSHHHHHHHSBTTSEEE--------EHHHHTTSCSEEEECSCG
T ss_pred CCEEEEEc-cCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcee--------cHHHHHhCCCEEEECCCh
Confidence 57899999 5999999999999999999999999877554333344331 345678899999988443
|
| >1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5 | Back alignment and structure |
|---|
Probab=97.34 E-value=0.00012 Score=65.43 Aligned_cols=69 Identities=16% Similarity=0.099 Sum_probs=48.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh---cCCCceeeeccCCCHHHHHHHhcCccEEEEcCC
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALRGVRSIICPSE 172 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~---~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~ 172 (306)
.+++++|+|+ |++|+.+++.|++.|++|++..|+.+++.+. ++....+...|+ +.+.+ .++|+||++++
T Consensus 118 ~~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~~~~~~~~~---~~~~~--~~~DivVn~t~ 189 (271)
T 1nyt_A 118 PGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQALSM---DELEG--HEFDLIINATS 189 (271)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSEEECCS---GGGTT--CCCSEEEECCS
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhccCCeeEecH---HHhcc--CCCCEEEECCC
Confidence 4789999999 8899999999999999999999998764332 221001222333 22222 58999999854
|
| >3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A | Back alignment and structure |
|---|
Probab=97.33 E-value=0.00035 Score=62.92 Aligned_cols=71 Identities=13% Similarity=0.199 Sum_probs=53.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEecCcchhhhh---cC---CCceeeeccCCCHHHHHHHhcCccEEEEc
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMES---FG---TYVESMAGDASNKKFLKTALRGVRSIICP 170 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~l~R~~~~~~~~---~~---~~v~~v~~D~~d~~~l~~~~~~~d~vi~~ 170 (306)
.+++++|+|| |++|+.++..|++.|. +|+++.|+.+++++. +. ..+.+...++. ++.+.+.++|+||++
T Consensus 126 ~~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~~---~l~~~l~~~DiVIna 201 (283)
T 3jyo_A 126 KLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDAR---GIEDVIAAADGVVNA 201 (283)
T ss_dssp CCSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECST---THHHHHHHSSEEEEC
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCHH---HHHHHHhcCCEEEEC
Confidence 4789999998 8999999999999998 799999999875432 11 12344444443 455677889999998
Q ss_pred CC
Q 021854 171 SE 172 (306)
Q Consensus 171 ~~ 172 (306)
++
T Consensus 202 Tp 203 (283)
T 3jyo_A 202 TP 203 (283)
T ss_dssp SS
T ss_pred CC
Confidence 43
|
| >2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A* | Back alignment and structure |
|---|
Probab=97.32 E-value=0.00036 Score=64.70 Aligned_cols=95 Identities=16% Similarity=0.127 Sum_probs=61.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCC--H-HHHHHHh-cCccEEEEcCCc
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASN--K-KFLKTAL-RGVRSIICPSEG 173 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d--~-~~l~~~~-~~~d~vi~~~~g 173 (306)
.+++|+|+||+|.+|..+++.+...|++|++++|++++......-+... ..|..+ . +.+.+.. .++|++|.++++
T Consensus 163 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~-~~~~~~~~~~~~~~~~~~~g~D~vid~~g~ 241 (362)
T 2c0c_A 163 EGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKSLGCDR-PINYKTEPVGTVLKQEYPEGVDVVYESVGG 241 (362)
T ss_dssp TTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSE-EEETTTSCHHHHHHHHCTTCEEEEEECSCT
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCCcE-EEecCChhHHHHHHHhcCCCCCEEEECCCH
Confidence 5789999999999999999999899999999999876633221112222 224433 2 2233322 368999988654
Q ss_pred hhh----hcccccCCCEEEEecCccc
Q 021854 174 FIS----NAGSLKGVQHVILLSQLSV 195 (306)
Q Consensus 174 ~~~----~~a~~~gvkr~V~iSS~~~ 195 (306)
... +.++.. .++|.+++...
T Consensus 242 ~~~~~~~~~l~~~--G~iv~~g~~~~ 265 (362)
T 2c0c_A 242 AMFDLAVDALATK--GRLIVIGFISG 265 (362)
T ss_dssp HHHHHHHHHEEEE--EEEEECCCGGG
T ss_pred HHHHHHHHHHhcC--CEEEEEeCCCC
Confidence 322 223333 48998887654
|
| >4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=97.30 E-value=0.00026 Score=65.35 Aligned_cols=92 Identities=15% Similarity=0.159 Sum_probs=61.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhh--hcCCCceeeeccCCCH---HHHHHHh-cCccEEEEcC
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME--SFGTYVESMAGDASNK---KFLKTAL-RGVRSIICPS 171 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~--~~~~~v~~v~~D~~d~---~~l~~~~-~~~d~vi~~~ 171 (306)
.+++|+|+||+|.||..+++.+...|++|+++.|++++... .++. .. ..|..+. +.+.+.. .++|++|.++
T Consensus 167 ~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa--~~-~~~~~~~~~~~~~~~~~~~g~Dvvid~~ 243 (353)
T 4dup_A 167 EGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACERLGA--KR-GINYRSEDFAAVIKAETGQGVDIILDMI 243 (353)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTC--SE-EEETTTSCHHHHHHHHHSSCEEEEEESC
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCC--CE-EEeCCchHHHHHHHHHhCCCceEEEECC
Confidence 57899999999999999999999999999999998877432 2332 21 2344432 2333332 3689999886
Q ss_pred Cchhh----hcccccCCCEEEEecCcc
Q 021854 172 EGFIS----NAGSLKGVQHVILLSQLS 194 (306)
Q Consensus 172 ~g~~~----~~a~~~gvkr~V~iSS~~ 194 (306)
++... +.++.. .++|.++...
T Consensus 244 g~~~~~~~~~~l~~~--G~iv~~g~~~ 268 (353)
T 4dup_A 244 GAAYFERNIASLAKD--GCLSIIAFLG 268 (353)
T ss_dssp CGGGHHHHHHTEEEE--EEEEECCCTT
T ss_pred CHHHHHHHHHHhccC--CEEEEEEecC
Confidence 54322 222222 4788877553
|
| >1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A | Back alignment and structure |
|---|
Probab=97.29 E-value=0.0003 Score=65.49 Aligned_cols=70 Identities=17% Similarity=0.146 Sum_probs=53.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh---cCCCceeeeccCCCHHHHHHHhcCccEEEEcC
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALRGVRSIICPS 171 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~---~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~ 171 (306)
.+++|+|+|+ |.+|+.+++.+...|++|+++.|++++++.. ....+.. ...+.+.+.+.+.++|+||.++
T Consensus 166 ~~~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~DvVI~~~ 238 (361)
T 1pjc_A 166 KPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSRVEL---LYSNSAEIETAVAEADLLIGAV 238 (361)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGSEE---EECCHHHHHHHHHTCSEEEECC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhCceeEe---eeCCHHHHHHHHcCCCEEEECC
Confidence 4589999999 9999999999999999999999998774332 2222222 2234567777888999999883
|
| >3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=97.29 E-value=0.0002 Score=57.39 Aligned_cols=87 Identities=10% Similarity=0.087 Sum_probs=58.2
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh---cCCCceeeeccCCCHHHHHHHhcCccEEEEcCCch-
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALRGVRSIICPSEGF- 174 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~---~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~g~- 174 (306)
+++|+|.|+ |.+|+.+++.|...|++|++..|+.++.... ++ +... ... ++.++++++|+||.+++..
T Consensus 21 ~~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~~--~~~~--~~~---~~~~~~~~~Divi~at~~~~ 92 (144)
T 3oj0_A 21 GNKILLVGN-GMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKYE--YEYV--LIN---DIDSLIKNNDVIITATSSKT 92 (144)
T ss_dssp CCEEEEECC-SHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHHT--CEEE--ECS---CHHHHHHTCSEEEECSCCSS
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHhC--CceE--eec---CHHHHhcCCCEEEEeCCCCC
Confidence 789999997 9999999999999999999999998775432 22 2221 222 3456678999999884432
Q ss_pred -hhhcccccCCCEEEEecCc
Q 021854 175 -ISNAGSLKGVQHVILLSQL 193 (306)
Q Consensus 175 -~~~~a~~~gvkr~V~iSS~ 193 (306)
......-..-.+++.++..
T Consensus 93 ~~~~~~~l~~g~~vid~~~p 112 (144)
T 3oj0_A 93 PIVEERSLMPGKLFIDLGNP 112 (144)
T ss_dssp CSBCGGGCCTTCEEEECCSS
T ss_pred cEeeHHHcCCCCEEEEccCC
Confidence 2222111223466666543
|
| >1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B* | Back alignment and structure |
|---|
Probab=97.28 E-value=0.00086 Score=59.12 Aligned_cols=91 Identities=9% Similarity=0.043 Sum_probs=63.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEecCc-------------------chhhh---h---cCC--Cceeeec
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDK-------------------RNAME---S---FGT--YVESMAG 149 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~l~R~~-------------------~~~~~---~---~~~--~v~~v~~ 149 (306)
..++|+|.|+ |++|+++++.|+..|. +++++.++. .|+.. . ..+ .++.+..
T Consensus 30 ~~~~VlVvG~-Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~ 108 (249)
T 1jw9_B 30 KDSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVNA 108 (249)
T ss_dssp HHCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECS
T ss_pred hCCeEEEEee-CHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEEec
Confidence 4689999998 8999999999999997 888888876 34221 1 112 3444555
Q ss_pred cCCCHHHHHHHhcCccEEEEcCCch-----hhhcccccCCCEEEEec
Q 021854 150 DASNKKFLKTALRGVRSIICPSEGF-----ISNAGSLKGVQHVILLS 191 (306)
Q Consensus 150 D~~d~~~l~~~~~~~d~vi~~~~g~-----~~~~a~~~gvkr~V~iS 191 (306)
++. .+.+.+.++++|+||.+++.. +.+.+.+.++. +|..+
T Consensus 109 ~~~-~~~~~~~~~~~DvVi~~~d~~~~~~~l~~~~~~~~~p-~i~~~ 153 (249)
T 1jw9_B 109 LLD-DAELAALIAEHDLVLDCTDNVAVRNQLNAGCFAAKVP-LVSGA 153 (249)
T ss_dssp CCC-HHHHHHHHHTSSEEEECCSSHHHHHHHHHHHHHHTCC-EEEEE
T ss_pred cCC-HhHHHHHHhCCCEEEEeCCCHHHHHHHHHHHHHcCCC-EEEee
Confidence 554 456777889999999985543 44556666765 44443
|
| >1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A* | Back alignment and structure |
|---|
Probab=97.28 E-value=0.0011 Score=60.82 Aligned_cols=92 Identities=13% Similarity=0.153 Sum_probs=61.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHC-CCeEEEEecCcchhhh--hcCCCceeeeccCCCH---HHHHHHh--cCccEEEE
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVK-RTRIKALVKDKRNAME--SFGTYVESMAGDASNK---KFLKTAL--RGVRSIIC 169 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~-g~~V~~l~R~~~~~~~--~~~~~v~~v~~D~~d~---~~l~~~~--~~~d~vi~ 169 (306)
.+++|+|+||+|.||..+++.+... |++|+++.+++++.+. .++. .. ..|..+. +.+.+.. .++|++|.
T Consensus 170 ~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~~~g~--~~-~~~~~~~~~~~~~~~~~~~~~~d~vi~ 246 (347)
T 1jvb_A 170 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGA--DY-VINASMQDPLAEIRRITESKGVDAVID 246 (347)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHTC--SE-EEETTTSCHHHHHHHHTTTSCEEEEEE
T ss_pred CCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCC--CE-EecCCCccHHHHHHHHhcCCCceEEEE
Confidence 5789999999989999999999888 9999999998876432 2332 21 2344442 3355555 37899999
Q ss_pred cCCch-hh----hcccccCCCEEEEecCcc
Q 021854 170 PSEGF-IS----NAGSLKGVQHVILLSQLS 194 (306)
Q Consensus 170 ~~~g~-~~----~~a~~~gvkr~V~iSS~~ 194 (306)
++++. .. +.++.. .++|.++...
T Consensus 247 ~~g~~~~~~~~~~~l~~~--G~iv~~g~~~ 274 (347)
T 1jvb_A 247 LNNSEKTLSVYPKALAKQ--GKYVMVGLFG 274 (347)
T ss_dssp SCCCHHHHTTGGGGEEEE--EEEEECCSSC
T ss_pred CCCCHHHHHHHHHHHhcC--CEEEEECCCC
Confidence 86543 22 222333 4788887643
|
| >2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=97.27 E-value=0.00051 Score=63.63 Aligned_cols=89 Identities=7% Similarity=-0.046 Sum_probs=55.6
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCC-CeEEEEecCcch---hhhhcCCCcee-eeccCCCHHHHHHHhcCccEEEEcCCc
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRN---AMESFGTYVES-MAGDASNKKFLKTALRGVRSIICPSEG 173 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~l~R~~~~---~~~~~~~~v~~-v~~D~~d~~~l~~~~~~~d~vi~~~~g 173 (306)
+++|.|.||+|.+|+++++.|.++. .+++++.+..+. ..+.++. +.- ....+.+.+ . +.++|+||.+++.
T Consensus 4 ~~kV~IiGAtG~iG~~llr~L~~~p~~elv~v~s~~~~g~~~~~~~~~-~~g~~~~~~~~~~---~-~~~vDvV~~a~g~ 78 (345)
T 2ozp_A 4 KKTLSIVGASGYAGGEFLRLALSHPYLEVKQVTSRRFAGEPVHFVHPN-LRGRTNLKFVPPE---K-LEPADILVLALPH 78 (345)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCTTEEEEEEBCSTTTTSBGGGTCGG-GTTTCCCBCBCGG---G-CCCCSEEEECCCT
T ss_pred CCEEEEECCCCHHHHHHHHHHHcCCCcEEEEEECchhhCchhHHhCch-hcCcccccccchh---H-hcCCCEEEEcCCc
Confidence 4789999999999999999998765 488887774432 1111110 000 011122322 2 5799999998665
Q ss_pred h----hhhcccccCCCEEEEecCc
Q 021854 174 F----ISNAGSLKGVQHVILLSQL 193 (306)
Q Consensus 174 ~----~~~~a~~~gvkr~V~iSS~ 193 (306)
. ....+.++|+ ++|-+|+.
T Consensus 79 ~~s~~~a~~~~~aG~-~VId~Sa~ 101 (345)
T 2ozp_A 79 GVFAREFDRYSALAP-VLVDLSAD 101 (345)
T ss_dssp THHHHTHHHHHTTCS-EEEECSST
T ss_pred HHHHHHHHHHHHCCC-EEEEcCcc
Confidence 4 2334456676 58888874
|
| >2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A* | Back alignment and structure |
|---|
Probab=97.25 E-value=0.00035 Score=64.48 Aligned_cols=93 Identities=18% Similarity=0.195 Sum_probs=62.7
Q ss_pred CC--CeEEEEcCCChHHHHHHHHHHHCCC-eEEEEecCcchhhhh---cCCCceeeeccCCCH---HHHHHHhc-CccEE
Q 021854 98 AR--DAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMES---FGTYVESMAGDASNK---KFLKTALR-GVRSI 167 (306)
Q Consensus 98 ~~--~~ilVtGatG~iG~~l~~~L~~~g~-~V~~l~R~~~~~~~~---~~~~v~~v~~D~~d~---~~l~~~~~-~~d~v 167 (306)
.+ ++|+|+||+|+||..+++.+...|+ +|+++.|+.++.... ++ .. ...|..+. +.+.+... ++|++
T Consensus 158 ~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~g--~~-~~~d~~~~~~~~~~~~~~~~~~d~v 234 (357)
T 2zb4_A 158 AGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELG--FD-AAINYKKDNVAEQLRESCPAGVDVY 234 (357)
T ss_dssp TTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSC--CS-EEEETTTSCHHHHHHHHCTTCEEEE
T ss_pred CCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcC--Cc-eEEecCchHHHHHHHHhcCCCCCEE
Confidence 46 8999999999999999999999999 999999987664322 33 22 23466542 23333333 68999
Q ss_pred EEcCCchhh----hcccccCCCEEEEecCccc
Q 021854 168 ICPSEGFIS----NAGSLKGVQHVILLSQLSV 195 (306)
Q Consensus 168 i~~~~g~~~----~~a~~~gvkr~V~iSS~~~ 195 (306)
|.++++... +.++.. .++|.++....
T Consensus 235 i~~~G~~~~~~~~~~l~~~--G~iv~~G~~~~ 264 (357)
T 2zb4_A 235 FDNVGGNISDTVISQMNEN--SHIILCGQISQ 264 (357)
T ss_dssp EESCCHHHHHHHHHTEEEE--EEEEECCCGGG
T ss_pred EECCCHHHHHHHHHHhccC--cEEEEECCccc
Confidence 998664322 222333 47888876543
|
| >3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A* | Back alignment and structure |
|---|
Probab=97.25 E-value=0.00035 Score=62.79 Aligned_cols=68 Identities=9% Similarity=0.002 Sum_probs=53.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcCC
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE 172 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~ 172 (306)
.+++++|+|+ |++|+.++..|.+.|+ +|++..|+.+++.+... .+.. ...+++.+++.++|+||++++
T Consensus 116 ~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~-~~~~-----~~~~~~~~~~~~aDiVInaTp 184 (277)
T 3don_A 116 EDAYILILGA-GGASKGIANELYKIVRPTLTVANRTMSRFNNWSL-NINK-----INLSHAESHLDEFDIIINTTP 184 (277)
T ss_dssp GGCCEEEECC-SHHHHHHHHHHHTTCCSCCEEECSCGGGGTTCCS-CCEE-----ECHHHHHHTGGGCSEEEECCC
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHH-hccc-----ccHhhHHHHhcCCCEEEECcc
Confidence 4689999998 8999999999999998 99999999988654432 2222 134567777889999999843
|
| >2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus} | Back alignment and structure |
|---|
Probab=97.24 E-value=0.0006 Score=61.75 Aligned_cols=70 Identities=16% Similarity=0.059 Sum_probs=53.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEecCcchhhhh---cCCCceeeeccCCCHHHHHHHhcCccEEEEcCC
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALRGVRSIICPSE 172 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~l~R~~~~~~~~---~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~ 172 (306)
.+++|+|+|+ |++|+.++..|++.|+ +|++..|+.+++.+. ++.... ++.+.+++.+.+.++|+||++++
T Consensus 140 ~~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~~----~~~~~~~~~~~~~~aDivIn~t~ 213 (297)
T 2egg_A 140 DGKRILVIGA-GGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERRS----AYFSLAEAETRLAEYDIIINTTS 213 (297)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSSC----CEECHHHHHHTGGGCSEEEECSC
T ss_pred CCCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhccC----ceeeHHHHHhhhccCCEEEECCC
Confidence 4789999998 8899999999999998 999999998775433 222110 22234567778889999999844
|
| >2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C* | Back alignment and structure |
|---|
Probab=97.16 E-value=0.00068 Score=62.51 Aligned_cols=87 Identities=13% Similarity=0.111 Sum_probs=54.4
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCC---CeEEEEec--CcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcCCc
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKR---TRIKALVK--DKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG 173 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g---~~V~~l~R--~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~g 173 (306)
+++|.|.||+|.+|+++++.|.+++ .+++++.. +..+... +. +.++...|. |.+ .+.++|+||.+.+.
T Consensus 3 ~~kV~I~GAtG~iG~~llr~L~~~~~p~~elv~i~s~~~~G~~~~-~~-~~~i~~~~~-~~~----~~~~vDvVf~a~g~ 75 (336)
T 2r00_A 3 QFNVAIFGATGAVGETMLEVLQEREFPVDELFLLASERSEGKTYR-FN-GKTVRVQNV-EEF----DWSQVHIALFSAGG 75 (336)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTTTCEEE-ET-TEEEEEEEG-GGC----CGGGCSEEEECSCH
T ss_pred ccEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEEECCCCCCCcee-ec-CceeEEecC-ChH----HhcCCCEEEECCCc
Confidence 4789999999999999999999873 46777763 2222111 11 112222222 111 34689999998765
Q ss_pred h----hhhcccccCCCEEEEecCc
Q 021854 174 F----ISNAGSLKGVQHVILLSQL 193 (306)
Q Consensus 174 ~----~~~~a~~~gvkr~V~iSS~ 193 (306)
. ......++|+ ++|-.|+.
T Consensus 76 ~~s~~~a~~~~~~G~-~vId~s~~ 98 (336)
T 2r00_A 76 ELSAKWAPIAAEAGV-VVIDNTSH 98 (336)
T ss_dssp HHHHHHHHHHHHTTC-EEEECSST
T ss_pred hHHHHHHHHHHHcCC-EEEEcCCc
Confidence 4 2334456676 57777775
|
| >3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A* | Back alignment and structure |
|---|
Probab=97.15 E-value=0.0009 Score=60.92 Aligned_cols=93 Identities=11% Similarity=0.055 Sum_probs=62.2
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhh--hcCCCceeeeccCCC---HHHHHHHhc--CccEEEE
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME--SFGTYVESMAGDASN---KKFLKTALR--GVRSIIC 169 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~--~~~~~v~~v~~D~~d---~~~l~~~~~--~~d~vi~ 169 (306)
.++++|+|+||+|.+|...++.+...|++|+++.|++++.+. .++ ... ..|..+ .+.+.+... ++|++|.
T Consensus 139 ~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~G--a~~-~~~~~~~~~~~~~~~~~~~~g~Dvvid 215 (325)
T 3jyn_A 139 KPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAKALG--AWE-TIDYSHEDVAKRVLELTDGKKCPVVYD 215 (325)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHT--CSE-EEETTTSCHHHHHHHHTTTCCEEEEEE
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcC--CCE-EEeCCCccHHHHHHHHhCCCCceEEEE
Confidence 357899999999999999999998999999999998876432 233 221 234443 234444443 6899998
Q ss_pred cCCchhh----hcccccCCCEEEEecCcc
Q 021854 170 PSEGFIS----NAGSLKGVQHVILLSQLS 194 (306)
Q Consensus 170 ~~~g~~~----~~a~~~gvkr~V~iSS~~ 194 (306)
++++... +..+.. .++|.++...
T Consensus 216 ~~g~~~~~~~~~~l~~~--G~iv~~g~~~ 242 (325)
T 3jyn_A 216 GVGQDTWLTSLDSVAPR--GLVVSFGNAS 242 (325)
T ss_dssp SSCGGGHHHHHTTEEEE--EEEEECCCTT
T ss_pred CCChHHHHHHHHHhcCC--CEEEEEecCC
Confidence 8654322 222222 4788887654
|
| >1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A | Back alignment and structure |
|---|
Probab=97.13 E-value=0.0015 Score=59.75 Aligned_cols=93 Identities=11% Similarity=0.065 Sum_probs=61.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCH---HHHHHHhcCccEEEEcCCc-
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNK---KFLKTALRGVRSIICPSEG- 173 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~---~~l~~~~~~~d~vi~~~~g- 173 (306)
.+++|+|+|| |.+|..+++.+...|++|+++.|++++.+....-+... ..|..+. +.+.+...++|++|.++++
T Consensus 164 ~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~~-~~d~~~~~~~~~~~~~~~~~d~vid~~g~~ 241 (339)
T 1rjw_A 164 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKELGADL-VVNPLKEDAAKFMKEKVGGVHAAVVTAVSK 241 (339)
T ss_dssp TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSE-EECTTTSCHHHHHHHHHSSEEEEEESSCCH
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHCCCCE-EecCCCccHHHHHHHHhCCCCEEEECCCCH
Confidence 5789999999 78999999999899999999999887643221112222 2455532 3344434689999998554
Q ss_pred h-h---hhcccccCCCEEEEecCcc
Q 021854 174 F-I---SNAGSLKGVQHVILLSQLS 194 (306)
Q Consensus 174 ~-~---~~~a~~~gvkr~V~iSS~~ 194 (306)
. + .+.++.. .++|.++...
T Consensus 242 ~~~~~~~~~l~~~--G~~v~~g~~~ 264 (339)
T 1rjw_A 242 PAFQSAYNSIRRG--GACVLVGLPP 264 (339)
T ss_dssp HHHHHHHHHEEEE--EEEEECCCCS
T ss_pred HHHHHHHHHhhcC--CEEEEecccC
Confidence 2 2 2233333 3788887643
|
| >3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A* | Back alignment and structure |
|---|
Probab=97.12 E-value=0.0015 Score=59.59 Aligned_cols=95 Identities=16% Similarity=0.036 Sum_probs=62.0
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCC---HHHHHHHh--cCccEEEEcC
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASN---KKFLKTAL--RGVRSIICPS 171 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d---~~~l~~~~--~~~d~vi~~~ 171 (306)
..+++|||+||+|.+|...++.+...|++|+++.+++++......-+... ..|..+ .+.+.+.. .++|++|.++
T Consensus 147 ~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~-~~~~~~~~~~~~~~~~~~~~g~D~vid~~ 225 (334)
T 3qwb_A 147 KKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAKEYGAEY-LINASKEDILRQVLKFTNGKGVDASFDSV 225 (334)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSE-EEETTTSCHHHHHHHHTTTSCEEEEEECC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcE-EEeCCCchHHHHHHHHhCCCCceEEEECC
Confidence 35789999999999999999999999999999999887643221111221 234433 23444444 3689999885
Q ss_pred Cchhh----hcccccCCCEEEEecCcc
Q 021854 172 EGFIS----NAGSLKGVQHVILLSQLS 194 (306)
Q Consensus 172 ~g~~~----~~a~~~gvkr~V~iSS~~ 194 (306)
++... +..+.. .++|.++...
T Consensus 226 g~~~~~~~~~~l~~~--G~iv~~G~~~ 250 (334)
T 3qwb_A 226 GKDTFEISLAALKRK--GVFVSFGNAS 250 (334)
T ss_dssp GGGGHHHHHHHEEEE--EEEEECCCTT
T ss_pred ChHHHHHHHHHhccC--CEEEEEcCCC
Confidence 54322 223333 4788887543
|
| >1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A | Back alignment and structure |
|---|
Probab=97.11 E-value=0.00074 Score=62.87 Aligned_cols=91 Identities=11% Similarity=0.086 Sum_probs=56.6
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCC-CeEEEEecCcch---hhhhcCCCce-eeeccCCCHHHHHHHhcCccEEEEcCCc
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRN---AMESFGTYVE-SMAGDASNKKFLKTALRGVRSIICPSEG 173 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~l~R~~~~---~~~~~~~~v~-~v~~D~~d~~~l~~~~~~~d~vi~~~~g 173 (306)
.++|.|.||+|.+|+++++.|.++. .+++++.+..+. ..+.++. +. .+..|+.-.+ ++.++++|+||.+++.
T Consensus 16 ~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~~~~~g~~~~~~~~~-~~~~v~~dl~~~~--~~~~~~vDvVf~atp~ 92 (359)
T 1xyg_A 16 DIRIGLLGASGYTGAEIVRLLANHPHFQVTLMTADRKAGQSMESVFPH-LRAQKLPTLVSVK--DADFSTVDAVFCCLPH 92 (359)
T ss_dssp CEEEEEECCSSHHHHHHHHHHHTCSSEEEEEEBCSTTTTSCHHHHCGG-GTTSCCCCCBCGG--GCCGGGCSEEEECCCT
T ss_pred CcEEEEECcCCHHHHHHHHHHHcCCCcEEEEEeCchhcCCCHHHhCch-hcCcccccceecc--hhHhcCCCEEEEcCCc
Confidence 3689999999999999999999876 488888765422 1111110 00 0012332222 3356789999998653
Q ss_pred h----hhhcccccCCCEEEEecCcc
Q 021854 174 F----ISNAGSLKGVQHVILLSQLS 194 (306)
Q Consensus 174 ~----~~~~a~~~gvkr~V~iSS~~ 194 (306)
. ....+ ++|+ ++|-.|+..
T Consensus 93 ~~s~~~a~~~-~aG~-~VId~sa~~ 115 (359)
T 1xyg_A 93 GTTQEIIKEL-PTAL-KIVDLSADF 115 (359)
T ss_dssp TTHHHHHHTS-CTTC-EEEECSSTT
T ss_pred hhHHHHHHHH-hCCC-EEEECCccc
Confidence 3 33445 6676 577777753
|
| >4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=97.09 E-value=0.002 Score=61.96 Aligned_cols=91 Identities=16% Similarity=0.285 Sum_probs=72.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhh---hcCCCceeeeccCCCHHHHHHH-hcCccEEEEcCCc
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTA-LRGVRSIICPSEG 173 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~---~~~~~v~~v~~D~~d~~~l~~~-~~~~d~vi~~~~g 173 (306)
..++|+|.|| |.+|..++++| ..+++|.++-++.++... .+ ++..++.+|.+|.+-++++ ++.+|+++.+++.
T Consensus 234 ~~~~v~I~Gg-G~ig~~lA~~L-~~~~~v~iIE~d~~r~~~la~~l-~~~~Vi~GD~td~~~L~ee~i~~~D~~ia~T~~ 310 (461)
T 4g65_A 234 PYRRIMIVGG-GNIGASLAKRL-EQTYSVKLIERNLQRAEKLSEEL-ENTIVFCGDAADQELLTEENIDQVDVFIALTNE 310 (461)
T ss_dssp CCCEEEEECC-SHHHHHHHHHH-TTTSEEEEEESCHHHHHHHHHHC-TTSEEEESCTTCHHHHHHTTGGGCSEEEECCSC
T ss_pred cccEEEEEcc-hHHHHHHHHHh-hhcCceEEEecCHHHHHHHHHHC-CCceEEeccccchhhHhhcCchhhcEEEEcccC
Confidence 4689999998 99999999997 457999999999987443 33 3678999999999988664 7889999998654
Q ss_pred h-----hhhcccccCCCEEEEec
Q 021854 174 F-----ISNAGSLKGVQHVILLS 191 (306)
Q Consensus 174 ~-----~~~~a~~~gvkr~V~iS 191 (306)
- ..-.|++.|+++.|-.-
T Consensus 311 De~Ni~~~llAk~~gv~kvIa~v 333 (461)
T 4g65_A 311 DETNIMSAMLAKRMGAKKVMVLI 333 (461)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEEC
T ss_pred cHHHHHHHHHHHHcCCccccccc
Confidence 2 33457888999988653
|
| >3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A | Back alignment and structure |
|---|
Probab=97.09 E-value=0.00091 Score=62.40 Aligned_cols=88 Identities=17% Similarity=0.198 Sum_probs=52.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCC---eEEEEec--CcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcCC
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRT---RIKALVK--DKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE 172 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~---~V~~l~R--~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~ 172 (306)
|+.+|.|.||||++|+++++.|.++++ ++..+.- +..+... +. +.+...-++.. ..++++|+||.+++
T Consensus 1 m~~kVaIvGATG~vG~eLlrlL~~~~~p~~el~~~as~~saG~~~~-~~-~~~~~~~~~~~-----~~~~~~Dvvf~a~~ 73 (366)
T 3pwk_A 1 MGYTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASARSAGKSLK-FK-DQDITIEETTE-----TAFEGVDIALFSAG 73 (366)
T ss_dssp -CEEEEEETTTSHHHHHHHHHHHTCCCCEEEEEEEECTTTTTCEEE-ET-TEEEEEEECCT-----TTTTTCSEEEECSC
T ss_pred CCcEEEEECCCChHHHHHHHHHhcCCCCcEEEEEEEccccCCCcce-ec-CCCceEeeCCH-----HHhcCCCEEEECCC
Confidence 357999999999999999999888765 3343332 1111111 11 11222222221 12579999999876
Q ss_pred chh----hhcccccCCCEEEEecCc
Q 021854 173 GFI----SNAGSLKGVQHVILLSQL 193 (306)
Q Consensus 173 g~~----~~~a~~~gvkr~V~iSS~ 193 (306)
... .....++|+ ++|-.|+.
T Consensus 74 ~~~s~~~a~~~~~~G~-~vIDlSa~ 97 (366)
T 3pwk_A 74 SSTSAKYAPYAVKAGV-VVVDNTSY 97 (366)
T ss_dssp HHHHHHHHHHHHHTTC-EEEECSST
T ss_pred hHhHHHHHHHHHHCCC-EEEEcCCc
Confidence 542 223345676 57777775
|
| >2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A* | Back alignment and structure |
|---|
Probab=97.06 E-value=0.00071 Score=63.31 Aligned_cols=70 Identities=13% Similarity=0.023 Sum_probs=55.2
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhh---hhcCCCceeeeccCCCHHHHHHHhcCccEEEEc
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM---ESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~---~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~ 170 (306)
..+++|+|+|+ |.||+.+++.+...|++|++..|++++.. +.++..+ ..+..+.+.+.+.++++|+||.+
T Consensus 166 l~g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~g~~~---~~~~~~~~~l~~~l~~aDvVi~~ 238 (377)
T 2vhw_A 166 VEPADVVVIGA-GTAGYNAARIANGMGATVTVLDINIDKLRQLDAEFCGRI---HTRYSSAYELEGAVKRADLVIGA 238 (377)
T ss_dssp BCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSS---EEEECCHHHHHHHHHHCSEEEEC
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhcCCee---EeccCCHHHHHHHHcCCCEEEEC
Confidence 45799999999 99999999999999999999999887643 2233322 22344567788888999999987
|
| >3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP} | Back alignment and structure |
|---|
Probab=97.03 E-value=0.00052 Score=61.41 Aligned_cols=67 Identities=6% Similarity=0.040 Sum_probs=48.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcCC
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE 172 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~ 172 (306)
++++|.|.|+||.+|..+++.|++.|++|++..|++++.......++.. .+ ..++++++|+||.+.+
T Consensus 10 mmm~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~-----~~---~~~~~~~aDvVi~av~ 76 (286)
T 3c24_A 10 GPKTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRLQGMGIPL-----TD---GDGWIDEADVVVLALP 76 (286)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHHHHTTCCC-----CC---SSGGGGTCSEEEECSC
T ss_pred cCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHhcCCCc-----CC---HHHHhcCCCEEEEcCC
Confidence 3579999999999999999999999999999999887644322112221 11 2345677888887744
|
| >3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A* | Back alignment and structure |
|---|
Probab=97.02 E-value=0.0029 Score=57.17 Aligned_cols=89 Identities=13% Similarity=0.125 Sum_probs=61.7
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEecCc------------------chhh---h---hcCC--Cceeee
Q 021854 96 EEARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDK------------------RNAM---E---SFGT--YVESMA 148 (306)
Q Consensus 96 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~l~R~~------------------~~~~---~---~~~~--~v~~v~ 148 (306)
.....+|+|.|+ |++|+++++.|+..|. +++++.++. .|+. + ...+ .++.+.
T Consensus 33 kL~~~~VlVvGa-GGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~iNP~v~v~~~~ 111 (292)
T 3h8v_A 33 KIRTFAVAIVGV-GGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNINPDVLFEVHN 111 (292)
T ss_dssp GGGGCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBC------------CCTTSBHHHHHHHHHHHHCTTSEEEEEC
T ss_pred HHhCCeEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhhCCCcEEEEec
Confidence 345789999999 8899999999999995 777776654 2211 1 1223 455566
Q ss_pred ccCCCHHHHHHHh-----------cCccEEEEcCCch-----hhhcccccCCC
Q 021854 149 GDASNKKFLKTAL-----------RGVRSIICPSEGF-----ISNAGSLKGVQ 185 (306)
Q Consensus 149 ~D~~d~~~l~~~~-----------~~~d~vi~~~~g~-----~~~~a~~~gvk 185 (306)
.++++.+.++..+ +++|+||.+...+ +.++|.+.++.
T Consensus 112 ~~l~~~~~~~~~~~~~~~~~l~~~~~~DlVid~~Dn~~~R~~in~~c~~~~~P 164 (292)
T 3h8v_A 112 YNITTVENFQHFMDRISNGGLEEGKPVDLVLSCVDNFEARMTINTACNELGQT 164 (292)
T ss_dssp CCTTSHHHHHHHHHHHHHBSSSTTBCCSEEEECCSSHHHHHHHHHHHHHHTCC
T ss_pred ccCCcHHHHHHHhhhhcccccccCCCCCEEEECCcchhhhhHHHHHHHHhCCC
Confidence 6777656666654 6899999886554 44567777765
|
| >1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii} | Back alignment and structure |
|---|
Probab=97.00 E-value=0.001 Score=61.73 Aligned_cols=92 Identities=13% Similarity=0.064 Sum_probs=54.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCC-CeEEEEecCcch----hhhhcCCCce----eeeccC--C--CHHHHHHHhc-C
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRN----AMESFGTYVE----SMAGDA--S--NKKFLKTALR-G 163 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~l~R~~~~----~~~~~~~~v~----~v~~D~--~--d~~~l~~~~~-~ 163 (306)
|+++|.|.||+|.+|+++++.|.++. .+|+++.|+.+. ..+.++...+ .-..|+ . |.+ ++++ +
T Consensus 7 M~~kV~IiGAtG~iG~~llr~L~~~p~~ev~~i~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 83 (354)
T 1ys4_A 7 MKIKVGVLGATGSVGQRFVQLLADHPMFELTALAASERSAGKKYKDACYWFQDRDIPENIKDMVVIPTDPK---HEEFED 83 (354)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEECTTTTTSBHHHHSCCCCSSCCCHHHHTCBCEESCTT---SGGGTT
T ss_pred ccceEEEECcCCHHHHHHHHHHhcCCCCEEEEEEcccccccccHHHhcccccccccccCceeeEEEeCCHH---HHhcCC
Confidence 44799999999999999999998765 588888764322 2222221100 000111 1 222 2346 8
Q ss_pred ccEEEEcCCch----hhhcccccCCCEEEEecCc
Q 021854 164 VRSIICPSEGF----ISNAGSLKGVQHVILLSQL 193 (306)
Q Consensus 164 ~d~vi~~~~g~----~~~~a~~~gvkr~V~iSS~ 193 (306)
+|+||.+++.. ....+.++|++ +|-.|+.
T Consensus 84 ~DvV~~atp~~~~~~~a~~~~~aG~~-VId~s~~ 116 (354)
T 1ys4_A 84 VDIVFSALPSDLAKKFEPEFAKEGKL-IFSNASA 116 (354)
T ss_dssp CCEEEECCCHHHHHHHHHHHHHTTCE-EEECCST
T ss_pred CCEEEECCCchHHHHHHHHHHHCCCE-EEECCch
Confidence 99999987654 22334456764 6666664
|
| >3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=97.00 E-value=0.0016 Score=58.64 Aligned_cols=71 Identities=14% Similarity=0.044 Sum_probs=53.5
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcCC
Q 021854 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE 172 (306)
Q Consensus 96 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~ 172 (306)
...+++|+|.|+ |.||+.+++.|...|++|++..|+.++.......+++.+ +.+++.++++++|+|+.+.+
T Consensus 152 ~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~-----~~~~l~~~l~~aDvVi~~~p 222 (293)
T 3d4o_A 152 TIHGANVAVLGL-GRVGMSVARKFAALGAKVKVGARESDLLARIAEMGMEPF-----HISKAAQELRDVDVCINTIP 222 (293)
T ss_dssp CSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTSEEE-----EGGGHHHHTTTCSEEEECCS
T ss_pred CCCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHCCCeec-----ChhhHHHHhcCCCEEEECCC
Confidence 456899999997 999999999999999999999998866432211223332 22457778899999998754
|
| >2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis} | Back alignment and structure |
|---|
Probab=97.00 E-value=0.0004 Score=62.41 Aligned_cols=38 Identities=5% Similarity=0.024 Sum_probs=33.8
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhh
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM 137 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~ 137 (306)
+++|+|.|+ |.+|..++..|++.|++|+++.|++++..
T Consensus 3 ~m~i~iiG~-G~~G~~~a~~l~~~g~~V~~~~r~~~~~~ 40 (316)
T 2ew2_A 3 AMKIAIAGA-GAMGSRLGIMLHQGGNDVTLIDQWPAHIE 40 (316)
T ss_dssp -CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHH
T ss_pred CCeEEEECc-CHHHHHHHHHHHhCCCcEEEEECCHHHHH
Confidence 479999998 99999999999999999999999887643
|
| >2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=96.99 E-value=0.0015 Score=58.97 Aligned_cols=72 Identities=10% Similarity=0.035 Sum_probs=54.2
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcCCc
Q 021854 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG 173 (306)
Q Consensus 96 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~g 173 (306)
...+++|+|.|+ |.+|+.+++.|...|++|++..|+.++.......+++.+ +..++.++++++|+|+.+.+.
T Consensus 154 ~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~-----~~~~l~~~l~~aDvVi~~~p~ 225 (300)
T 2rir_A 154 TIHGSQVAVLGL-GRTGMTIARTFAALGANVKVGARSSAHLARITEMGLVPF-----HTDELKEHVKDIDICINTIPS 225 (300)
T ss_dssp CSTTSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCEEE-----EGGGHHHHSTTCSEEEECCSS
T ss_pred CCCCCEEEEEcc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCeEE-----chhhHHHHhhCCCEEEECCCh
Confidence 456899999997 999999999999999999999998866432211123322 124577888999999987443
|
| >2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A* | Back alignment and structure |
|---|
Probab=96.99 E-value=0.0011 Score=60.90 Aligned_cols=91 Identities=15% Similarity=0.088 Sum_probs=60.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEecCcchhhh--hcCCCceeeeccCCCH---HHHHHHhc--CccEEEE
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAME--SFGTYVESMAGDASNK---KFLKTALR--GVRSIIC 169 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~l~R~~~~~~~--~~~~~v~~v~~D~~d~---~~l~~~~~--~~d~vi~ 169 (306)
.+++|+|+|| |.+|...++.+...|+ +|+++.|++++.+. .++ ... ..|..+. +.+.++.. ++|+||.
T Consensus 167 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~G--a~~-~~~~~~~~~~~~v~~~~~g~g~D~vid 242 (348)
T 2d8a_A 167 SGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVG--ADY-VINPFEEDVVKEVMDITDGNGVDVFLE 242 (348)
T ss_dssp TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHHT--CSE-EECTTTSCHHHHHHHHTTTSCEEEEEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhC--CCE-EECCCCcCHHHHHHHHcCCCCCCEEEE
Confidence 5789999999 9999999998888999 99999998876432 233 222 2344432 33444433 6899998
Q ss_pred cCCc-h-h---hhcccccCCCEEEEecCcc
Q 021854 170 PSEG-F-I---SNAGSLKGVQHVILLSQLS 194 (306)
Q Consensus 170 ~~~g-~-~---~~~a~~~gvkr~V~iSS~~ 194 (306)
++++ . + .+.++.. .++|.+++..
T Consensus 243 ~~g~~~~~~~~~~~l~~~--G~iv~~g~~~ 270 (348)
T 2d8a_A 243 FSGAPKALEQGLQAVTPA--GRVSLLGLYP 270 (348)
T ss_dssp CSCCHHHHHHHHHHEEEE--EEEEECCCCS
T ss_pred CCCCHHHHHHHHHHHhcC--CEEEEEccCC
Confidence 8554 2 2 2233333 4788887643
|
| >5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A* | Back alignment and structure |
|---|
Probab=96.94 E-value=0.00036 Score=64.34 Aligned_cols=72 Identities=17% Similarity=0.075 Sum_probs=46.2
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCC--e-----EEEEecCcc--hh----hhhcCCCceeeeccCCCHHHHHHHhcCcc
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKRT--R-----IKALVKDKR--NA----MESFGTYVESMAGDASNKKFLKTALRGVR 165 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g~--~-----V~~l~R~~~--~~----~~~~~~~v~~v~~D~~d~~~l~~~~~~~d 165 (306)
.++|+||||+|+||+.++..|+..+. + ++++.++.. ++ .++......+. .++.......+.++++|
T Consensus 3 ~~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~~~~~-~~~~~~~~~~~~~~daD 81 (333)
T 5mdh_A 3 PIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLL-KDVIATDKEEIAFKDLD 81 (333)
T ss_dssp CEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTE-EEEEEESCHHHHTTTCS
T ss_pred CeEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHhhhhccc-CCEEEcCCcHHHhCCCC
Confidence 47999999999999999999998774 4 777777542 21 11111001111 12222234567799999
Q ss_pred EEEEcC
Q 021854 166 SIICPS 171 (306)
Q Consensus 166 ~vi~~~ 171 (306)
+||+++
T Consensus 82 vVvitA 87 (333)
T 5mdh_A 82 VAILVG 87 (333)
T ss_dssp EEEECC
T ss_pred EEEEeC
Confidence 999973
|
| >1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A* | Back alignment and structure |
|---|
Probab=96.92 E-value=0.0033 Score=55.30 Aligned_cols=71 Identities=11% Similarity=0.132 Sum_probs=49.6
Q ss_pred CeEEEEcCCChHHHHHHHHHHHC-CCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHh-----cCccEEEEcC
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVK-RTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTAL-----RGVRSIICPS 171 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~-g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~-----~~~d~vi~~~ 171 (306)
++|+|.||+|.+|+.+++.+.+. +++++++.+..+...+....... +..|+++++.....+ .++++|+..+
T Consensus 1 mkV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~dl~~~~~~~~D-vvIDfT~p~a~~~~~~~a~~~g~~~VigTT 77 (245)
T 1p9l_A 1 MRVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGDPLSLLTDGNTE-VVIDFTHPDVVMGNLEFLIDNGIHAVVGTT 77 (245)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTCCTHHHHHTTCC-EEEECSCTTTHHHHHHHHHHTTCEEEECCC
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCCCHHHHhccCCc-EEEEccChHHHHHHHHHHHHcCCCEEEcCC
Confidence 47999999999999999999865 89999887655443332222333 667888776554433 3678777654
|
| >3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis} | Back alignment and structure |
|---|
Probab=96.91 E-value=0.001 Score=60.99 Aligned_cols=93 Identities=19% Similarity=0.216 Sum_probs=61.9
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhh--hcCCCceeeeccCCC---HHHHHHHhc--CccEEEE
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME--SFGTYVESMAGDASN---KKFLKTALR--GVRSIIC 169 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~--~~~~~v~~v~~D~~d---~~~l~~~~~--~~d~vi~ 169 (306)
..+++|+|+||+|.||...++.+...|++|+++.++.++.+. .++. .. ..|..+ .+.+.+... ++|++|.
T Consensus 143 ~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lga--~~-~~~~~~~~~~~~~~~~~~~~g~Dvvid 219 (340)
T 3gms_A 143 QRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLRLGA--AY-VIDTSTAPLYETVMELTNGIGADAAID 219 (340)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTC--SE-EEETTTSCHHHHHHHHTTTSCEEEEEE
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhCCC--cE-EEeCCcccHHHHHHHHhCCCCCcEEEE
Confidence 357899999999999999998888899999999998876432 2332 22 234443 233444443 6899998
Q ss_pred cCCchh----hhcccccCCCEEEEecCcc
Q 021854 170 PSEGFI----SNAGSLKGVQHVILLSQLS 194 (306)
Q Consensus 170 ~~~g~~----~~~a~~~gvkr~V~iSS~~ 194 (306)
++++.. .+..+.. .++|.++...
T Consensus 220 ~~g~~~~~~~~~~l~~~--G~iv~~G~~~ 246 (340)
T 3gms_A 220 SIGGPDGNELAFSLRPN--GHFLTIGLLS 246 (340)
T ss_dssp SSCHHHHHHHHHTEEEE--EEEEECCCTT
T ss_pred CCCChhHHHHHHHhcCC--CEEEEEeecC
Confidence 865432 2222222 4788887654
|
| >2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.90 E-value=0.0059 Score=56.61 Aligned_cols=93 Identities=11% Similarity=0.062 Sum_probs=58.5
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhh--hhcCCCceeeeccCCCHHHHHHHh--cCccEEEEcCC
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM--ESFGTYVESMAGDASNKKFLKTAL--RGVRSIICPSE 172 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~--~~~~~~v~~v~~D~~d~~~l~~~~--~~~d~vi~~~~ 172 (306)
..+++|+|+||+|.+|...++.+...|++|+++.+ .++.+ ..++ ... ..|..+.+..+.+. .++|++|.+++
T Consensus 182 ~~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~~-~~~~~~~~~lG--a~~-v~~~~~~~~~~~~~~~~g~D~vid~~g 257 (375)
T 2vn8_A 182 CTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVCS-QDASELVRKLG--ADD-VIDYKSGSVEEQLKSLKPFDFILDNVG 257 (375)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC-GGGHHHHHHTT--CSE-EEETTSSCHHHHHHTSCCBSEEEESSC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEeC-hHHHHHHHHcC--CCE-EEECCchHHHHHHhhcCCCCEEEECCC
Confidence 35789999999999999999888889999998874 44422 2233 222 23444422222222 57999998855
Q ss_pred ch-h--hhcccc-cCCCEEEEecCc
Q 021854 173 GF-I--SNAGSL-KGVQHVILLSQL 193 (306)
Q Consensus 173 g~-~--~~~a~~-~gvkr~V~iSS~ 193 (306)
+. . ..+... ..-.++|.++..
T Consensus 258 ~~~~~~~~~~~~l~~~G~iv~~g~~ 282 (375)
T 2vn8_A 258 GSTETWAPDFLKKWSGATYVTLVTP 282 (375)
T ss_dssp TTHHHHGGGGBCSSSCCEEEESCCS
T ss_pred ChhhhhHHHHHhhcCCcEEEEeCCC
Confidence 43 2 222221 233588888753
|
| >3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A* | Back alignment and structure |
|---|
Probab=96.90 E-value=0.0015 Score=58.37 Aligned_cols=63 Identities=10% Similarity=0.026 Sum_probs=48.0
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcC
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS 171 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~ 171 (306)
+++++|+|+ |+.|+.++..|++.|.+|++..|+.+++++...-+++.+ ++.+ +.++|+||+++
T Consensus 118 ~k~vlvlGa-GGaaraia~~L~~~G~~v~V~nRt~~ka~~la~~~~~~~--~~~~-------l~~~DiVInaT 180 (269)
T 3phh_A 118 YQNALILGA-GGSAKALACELKKQGLQVSVLNRSSRGLDFFQRLGCDCF--MEPP-------KSAFDLIINAT 180 (269)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCTTHHHHHHHTCEEE--SSCC-------SSCCSEEEECC
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeEe--cHHH-------hccCCEEEEcc
Confidence 789999998 999999999999999999999999988655431122322 3333 12789999883
|
| >4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=96.87 E-value=0.003 Score=57.86 Aligned_cols=92 Identities=18% Similarity=0.187 Sum_probs=58.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhh--hcCCCceeeeccCCC-HHHHHHHhc--CccEEEEcCC
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME--SFGTYVESMAGDASN-KKFLKTALR--GVRSIICPSE 172 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~--~~~~~v~~v~~D~~d-~~~l~~~~~--~~d~vi~~~~ 172 (306)
.+++|||+||+|.||...++.+...|++|+++.++.++.+. .++. -.++..+ .+ .+.+.+... ++|++|.+++
T Consensus 159 ~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga-~~v~~~~-~~~~~~v~~~~~~~g~Dvvid~~g 236 (342)
T 4eye_A 159 AGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKSVGA-DIVLPLE-EGWAKAVREATGGAGVDMVVDPIG 236 (342)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTC-SEEEESS-TTHHHHHHHHTTTSCEEEEEESCC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCC-cEEecCc-hhHHHHHHHHhCCCCceEEEECCc
Confidence 57899999999999999999999999999999998876432 2332 1223233 23 234444443 5899998855
Q ss_pred chh----hhcccccCCCEEEEecCc
Q 021854 173 GFI----SNAGSLKGVQHVILLSQL 193 (306)
Q Consensus 173 g~~----~~~a~~~gvkr~V~iSS~ 193 (306)
+.. .+..... .++|.++..
T Consensus 237 ~~~~~~~~~~l~~~--G~iv~~G~~ 259 (342)
T 4eye_A 237 GPAFDDAVRTLASE--GRLLVVGFA 259 (342)
T ss_dssp --CHHHHHHTEEEE--EEEEEC---
T ss_pred hhHHHHHHHhhcCC--CEEEEEEcc
Confidence 432 2222222 478877654
|
| >3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=96.81 E-value=0.0023 Score=57.20 Aligned_cols=68 Identities=9% Similarity=0.117 Sum_probs=49.2
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEecCcchhhhh---cCC-CceeeeccCCCHHHHHHHhcCccEEEEcC
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMES---FGT-YVESMAGDASNKKFLKTALRGVRSIICPS 171 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~l~R~~~~~~~~---~~~-~v~~v~~D~~d~~~l~~~~~~~d~vi~~~ 171 (306)
..+++++|+|+ |++|+.++..|++.|. +|++..|+.+++++. ++. .+.. .++.+ +.. .++|+||+++
T Consensus 118 l~~k~~lvlGa-Gg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~--~~~~~---l~~--~~~DivInaT 189 (272)
T 3pwz_A 118 LRNRRVLLLGA-GGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDHSRLRI--SRYEA---LEG--QSFDIVVNAT 189 (272)
T ss_dssp CTTSEEEEECC-SHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCCTTEEE--ECSGG---GTT--CCCSEEEECS
T ss_pred ccCCEEEEECc-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhccCCeeE--eeHHH---hcc--cCCCEEEECC
Confidence 35799999998 8999999999999996 999999999875433 221 1222 23322 211 6889999984
Q ss_pred C
Q 021854 172 E 172 (306)
Q Consensus 172 ~ 172 (306)
+
T Consensus 190 p 190 (272)
T 3pwz_A 190 S 190 (272)
T ss_dssp S
T ss_pred C
Confidence 4
|
| >4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A | Back alignment and structure |
|---|
Probab=96.80 E-value=0.004 Score=59.15 Aligned_cols=98 Identities=12% Similarity=0.061 Sum_probs=61.9
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhh--hcCCCceee--eccCCC----------------HHH
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME--SFGTYVESM--AGDASN----------------KKF 156 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~--~~~~~v~~v--~~D~~d----------------~~~ 156 (306)
..+++|||+||+|.||...++.+...|++|++++++.++... .++....+- ..|+.+ .+.
T Consensus 219 ~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (447)
T 4a0s_A 219 KQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAVRALGCDLVINRAELGITDDIADDPRRVVETGRKLAKL 298 (447)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCCCEEEHHHHTCCTTGGGCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCCEEEecccccccccccccccccchhhhHHHHH
Confidence 357899999999999999999988999999999988876432 233211111 112211 233
Q ss_pred HHHHh-cCccEEEEcCCchhhhcc-c-ccCCCEEEEecCcc
Q 021854 157 LKTAL-RGVRSIICPSEGFISNAG-S-LKGVQHVILLSQLS 194 (306)
Q Consensus 157 l~~~~-~~~d~vi~~~~g~~~~~a-~-~~gvkr~V~iSS~~ 194 (306)
+.+.. .++|+||.++++...+.+ . -..-.++|.+++..
T Consensus 299 v~~~~g~g~Dvvid~~G~~~~~~~~~~l~~~G~iv~~G~~~ 339 (447)
T 4a0s_A 299 VVEKAGREPDIVFEHTGRVTFGLSVIVARRGGTVVTCGSSS 339 (447)
T ss_dssp HHHHHSSCCSEEEECSCHHHHHHHHHHSCTTCEEEESCCTT
T ss_pred HHHHhCCCceEEEECCCchHHHHHHHHHhcCCEEEEEecCC
Confidence 44444 368999998665322221 1 12235899987654
|
| >3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens} | Back alignment and structure |
|---|
Probab=96.79 E-value=0.0021 Score=57.43 Aligned_cols=65 Identities=8% Similarity=-0.048 Sum_probs=49.7
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcCC
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE 172 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~ 172 (306)
++|.|.|+ |.+|..+++.|++.|++|++..|++++.+.....++.. ..++.++++++|+||.+.+
T Consensus 2 ~~i~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~-------~~~~~~~~~~aDvvi~~vp 66 (287)
T 3pef_A 2 QKFGFIGL-GIMGSAMAKNLVKAGCSVTIWNRSPEKAEELAALGAER-------AATPCEVVESCPVTFAMLA 66 (287)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEE-------CSSHHHHHHHCSEEEECCS
T ss_pred CEEEEEee-cHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCee-------cCCHHHHHhcCCEEEEEcC
Confidence 68999997 99999999999999999999999998765433223322 1234556677899998854
|
| >1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A* | Back alignment and structure |
|---|
Probab=96.78 E-value=0.0018 Score=59.05 Aligned_cols=69 Identities=17% Similarity=0.234 Sum_probs=47.7
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCC--CeEEEEecCcchhh-hhcCCCceeeeccCCC---HHHHHHHhcCccEEEEc
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRNAM-ESFGTYVESMAGDASN---KKFLKTALRGVRSIICP 170 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~g--~~V~~l~R~~~~~~-~~~~~~v~~v~~D~~d---~~~l~~~~~~~d~vi~~ 170 (306)
++|+|+||+|++|..++..|+..| .+|.++.+++.+.. ..+..... ..++.. ..+++++++++|+||++
T Consensus 1 mKI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~~~~~a~dL~~~~~--~~~l~~~~~t~d~~~a~~~aDvVvi~ 75 (314)
T 1mld_A 1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIET--RATVKGYLGPEQLPDCLKGCDVVVIP 75 (314)
T ss_dssp CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHHHHTTSSS--SCEEEEEESGGGHHHHHTTCSEEEEC
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCccHHHHHHHhccCc--CceEEEecCCCCHHHHhCCCCEEEEC
Confidence 589999999999999999999888 68999988872211 11111110 111211 13567789999999998
|
| >3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans} | Back alignment and structure |
|---|
Probab=96.76 E-value=0.0032 Score=57.77 Aligned_cols=93 Identities=13% Similarity=0.130 Sum_probs=59.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCC-HHHHHHHhc--CccEEEEcCCch
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASN-KKFLKTALR--GVRSIICPSEGF 174 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d-~~~l~~~~~--~~d~vi~~~~g~ 174 (306)
.+++|||+||+|.+|...++.+...|++|+++ +++++.+....-+...+. +-.+ .+.+.+... ++|++|.++++.
T Consensus 150 ~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~~~lGa~~i~-~~~~~~~~~~~~~~~~g~D~vid~~g~~ 227 (343)
T 3gaz_A 150 DGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEYVRDLGATPID-ASREPEDYAAEHTAGQGFDLVYDTLGGP 227 (343)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHHHHHHTSEEEE-TTSCHHHHHHHHHTTSCEEEEEESSCTH
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHHHHHcCCCEec-cCCCHHHHHHHHhcCCCceEEEECCCcH
Confidence 57899999999999999999999999999998 776663321111233332 2223 233444443 689999886553
Q ss_pred hh----hcccccCCCEEEEecCcc
Q 021854 175 IS----NAGSLKGVQHVILLSQLS 194 (306)
Q Consensus 175 ~~----~~a~~~gvkr~V~iSS~~ 194 (306)
.. +.+... .++|.++...
T Consensus 228 ~~~~~~~~l~~~--G~iv~~g~~~ 249 (343)
T 3gaz_A 228 VLDASFSAVKRF--GHVVSCLGWG 249 (343)
T ss_dssp HHHHHHHHEEEE--EEEEESCCCS
T ss_pred HHHHHHHHHhcC--CeEEEEcccC
Confidence 22 222222 4788776543
|
| >4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=96.76 E-value=0.0031 Score=57.41 Aligned_cols=67 Identities=9% Similarity=0.015 Sum_probs=51.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcCC
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE 172 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~ 172 (306)
..++|.|.|+ |.+|..+++.|++.|++|++..|++++.+.....++.. ..++.++++++|+||.+.+
T Consensus 30 ~~~~I~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~-------~~~~~e~~~~aDvVi~~vp 96 (320)
T 4dll_A 30 YARKITFLGT-GSMGLPMARRLCEAGYALQVWNRTPARAASLAALGATI-------HEQARAAARDADIVVSMLE 96 (320)
T ss_dssp CCSEEEEECC-TTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCEE-------ESSHHHHHTTCSEEEECCS
T ss_pred CCCEEEEECc-cHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHCCCEe-------eCCHHHHHhcCCEEEEECC
Confidence 4579999988 99999999999999999999999998765544333322 1245567788999998744
|
| >3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=96.75 E-value=0.0053 Score=56.30 Aligned_cols=94 Identities=15% Similarity=0.150 Sum_probs=61.6
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhh--hcCCCceeeeccCCCH---HHHHHHh--cCccEEEEcC
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME--SFGTYVESMAGDASNK---KFLKTAL--RGVRSIICPS 171 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~--~~~~~v~~v~~D~~d~---~~l~~~~--~~~d~vi~~~ 171 (306)
.++++|+||+|.||...++.+...|++|+++++++++.+. .++ ... ..|..+. +.+.+.. +++|++|.+.
T Consensus 165 ~~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~~G--a~~-~~~~~~~~~~~~v~~~~~~~g~D~vid~~ 241 (349)
T 3pi7_A 165 EKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLKDIG--AAH-VLNEKAPDFEATLREVMKAEQPRIFLDAV 241 (349)
T ss_dssp CSEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHT--CSE-EEETTSTTHHHHHHHHHHHHCCCEEEESS
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcC--CCE-EEECCcHHHHHHHHHHhcCCCCcEEEECC
Confidence 3799999999999999999888899999999998877432 233 221 2344332 3344443 3799999986
Q ss_pred Cchhhhcc-cc-cCCCEEEEecCccc
Q 021854 172 EGFISNAG-SL-KGVQHVILLSQLSV 195 (306)
Q Consensus 172 ~g~~~~~a-~~-~gvkr~V~iSS~~~ 195 (306)
++.....+ .. ..-.++|.++....
T Consensus 242 g~~~~~~~~~~l~~~G~iv~~G~~~~ 267 (349)
T 3pi7_A 242 TGPLASAIFNAMPKRARWIIYGRLDP 267 (349)
T ss_dssp CHHHHHHHHHHSCTTCEEEECCCSCC
T ss_pred CChhHHHHHhhhcCCCEEEEEeccCC
Confidence 64322211 11 22358998876543
|
| >2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A* | Back alignment and structure |
|---|
Probab=96.73 E-value=0.0039 Score=57.09 Aligned_cols=91 Identities=14% Similarity=0.062 Sum_probs=59.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEecCcchhhhhcCCCceeeeccCCCH---HHHHHHh-cCccEEEEcCC
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGTYVESMAGDASNK---KFLKTAL-RGVRSIICPSE 172 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~---~~l~~~~-~~~d~vi~~~~ 172 (306)
.+++|||+|| |.+|...++.+...|+ +|+++.+++++.+....- .. ...|..+. +.+.++. .++|+||.+.+
T Consensus 164 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~l-a~-~v~~~~~~~~~~~~~~~~~~g~D~vid~~g 240 (343)
T 2dq4_A 164 SGKSVLITGA-GPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPY-AD-RLVNPLEEDLLEVVRRVTGSGVEVLLEFSG 240 (343)
T ss_dssp TTSCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTTT-CS-EEECTTTSCHHHHHHHHHSSCEEEEEECSC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-HH-hccCcCccCHHHHHHHhcCCCCCEEEECCC
Confidence 5789999999 9999999988888999 999999988764322111 11 22455432 2233222 36899998865
Q ss_pred c-h-h---hhcccccCCCEEEEecCc
Q 021854 173 G-F-I---SNAGSLKGVQHVILLSQL 193 (306)
Q Consensus 173 g-~-~---~~~a~~~gvkr~V~iSS~ 193 (306)
+ . + .+.++.. .++|.++..
T Consensus 241 ~~~~~~~~~~~l~~~--G~iv~~g~~ 264 (343)
T 2dq4_A 241 NEAAIHQGLMALIPG--GEARILGIP 264 (343)
T ss_dssp CHHHHHHHHHHEEEE--EEEEECCCC
T ss_pred CHHHHHHHHHHHhcC--CEEEEEecC
Confidence 4 2 2 2333333 378888753
|
| >2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=96.71 E-value=0.003 Score=58.48 Aligned_cols=89 Identities=10% Similarity=0.015 Sum_probs=54.7
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCC-CeEEEEecCc-c--h-hhhhcCCC---------ceeeeccCCCHHHHHHHhcCc
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDK-R--N-AMESFGTY---------VESMAGDASNKKFLKTALRGV 164 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~l~R~~-~--~-~~~~~~~~---------v~~v~~D~~d~~~l~~~~~~~ 164 (306)
+.+|.|.||+|.+|+++++.|.... .+++++..+. + + ..+.++.. .+....|+ |.+. ++++
T Consensus 4 ~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-d~~~----~~~v 78 (350)
T 2ep5_A 4 KIKVSLLGSTGMVGQKMVKMLAKHPYLELVKVSASPSKIGKKYKDAVKWIEQGDIPEEVQDLPIVST-NYED----HKDV 78 (350)
T ss_dssp CEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEECCGGGTTSBHHHHCCCCSSSSCCHHHHTCBEECS-SGGG----GTTC
T ss_pred CcEEEEECcCCHHHHHHHHHHHhCCCcEEEEEecChhhcCCCHHHhcCcccccccccCCceeEEeeC-CHHH----hcCC
Confidence 4789999999999999999988754 5888886222 1 1 22112210 11112333 3322 3689
Q ss_pred cEEEEcCCch----hhhcccccCCCEEEEecCc
Q 021854 165 RSIICPSEGF----ISNAGSLKGVQHVILLSQL 193 (306)
Q Consensus 165 d~vi~~~~g~----~~~~a~~~gvkr~V~iSS~ 193 (306)
|+||.+++.. ....+.++|++ +|-.|+.
T Consensus 79 DvVf~atp~~~s~~~a~~~~~aG~~-VId~s~~ 110 (350)
T 2ep5_A 79 DVVLSALPNELAESIELELVKNGKI-VVSNASP 110 (350)
T ss_dssp SEEEECCCHHHHHHHHHHHHHTTCE-EEECSST
T ss_pred CEEEECCChHHHHHHHHHHHHCCCE-EEECCcc
Confidence 9999987644 33445567765 6666664
|
| >3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=96.71 E-value=0.0021 Score=58.22 Aligned_cols=67 Identities=7% Similarity=-0.017 Sum_probs=50.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcCC
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE 172 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~ 172 (306)
.+++|.|.|+ |.+|..+++.|++.|++|++..|++++.......++.. ..++.++++++|+||.+.+
T Consensus 20 ~m~~I~iIG~-G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~-------~~~~~~~~~~aDvvi~~vp 86 (310)
T 3doj_A 20 HMMEVGFLGL-GIMGKAMSMNLLKNGFKVTVWNRTLSKCDELVEHGASV-------CESPAEVIKKCKYTIAMLS 86 (310)
T ss_dssp CSCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEE-------CSSHHHHHHHCSEEEECCS
T ss_pred cCCEEEEECc-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCeE-------cCCHHHHHHhCCEEEEEcC
Confidence 3589999987 99999999999999999999999998765443223321 1234556677899998744
|
| >1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A* | Back alignment and structure |
|---|
Probab=96.70 E-value=0.0023 Score=59.74 Aligned_cols=88 Identities=18% Similarity=0.129 Sum_probs=51.7
Q ss_pred CeEEEEcCCChHHHHHHHHHHH-CCC---eEEEEecCc-chhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcCCch
Q 021854 100 DAVLVTDGDSDIGQMVILSLIV-KRT---RIKALVKDK-RNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEGF 174 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~-~g~---~V~~l~R~~-~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~g~ 174 (306)
++|.|.||+|.+|++++++|+. +++ .+.++..+. .+....+. +.++...|..|.+. ++++|+||.+++..
T Consensus 2 ~kVaIvGAtG~vG~~llr~ll~~~~~~~v~i~~~~~~s~G~~v~~~~-g~~i~~~~~~~~~~----~~~~DvVf~a~g~~ 76 (367)
T 1t4b_A 2 QNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQAAPSFG-GTTGTLQDAFDLEA----LKALDIIVTCQGGD 76 (367)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTSBCCGGG-TCCCBCEETTCHHH----HHTCSEEEECSCHH
T ss_pred cEEEEECCCCHHHHHHHHHHHhcCCCCeEEEEEEEeCCCCCCccccC-CCceEEEecCChHH----hcCCCEEEECCCch
Confidence 6899999999999999995544 443 455554432 11111111 12334445555544 35999999987654
Q ss_pred ----hhhcccccCCCE-EEEecC
Q 021854 175 ----ISNAGSLKGVQH-VILLSQ 192 (306)
Q Consensus 175 ----~~~~a~~~gvkr-~V~iSS 192 (306)
......++|+++ +|=.|+
T Consensus 77 ~s~~~a~~~~~~G~k~vVID~ss 99 (367)
T 1t4b_A 77 YTNEIYPKLRESGWQGYWIDAAS 99 (367)
T ss_dssp HHHHHHHHHHHTTCCCEEEECSS
T ss_pred hHHHHHHHHHHCCCCEEEEcCCh
Confidence 333445678754 333344
|
| >3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=96.70 E-value=0.0026 Score=56.29 Aligned_cols=66 Identities=15% Similarity=0.137 Sum_probs=51.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcC
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS 171 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~ 171 (306)
.+ +++|.|+ |+.|++++..|++.|+ +|++..|+.+++++... .+... ..+++.++++++|+||+++
T Consensus 108 ~~-~vliiGa-Gg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~la~-~~~~~-----~~~~~~~~~~~aDiVInat 174 (253)
T 3u62_A 108 KE-PVVVVGA-GGAARAVIYALLQMGVKDIWVVNRTIERAKALDF-PVKIF-----SLDQLDEVVKKAKSLFNTT 174 (253)
T ss_dssp CS-SEEEECC-SHHHHHHHHHHHHTTCCCEEEEESCHHHHHTCCS-SCEEE-----EGGGHHHHHHTCSEEEECS
T ss_pred CC-eEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHH-HcccC-----CHHHHHhhhcCCCEEEECC
Confidence 46 9999998 9999999999999998 99999999988665432 22221 1245667788999999984
|
| >3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A | Back alignment and structure |
|---|
Probab=96.69 E-value=0.0072 Score=56.24 Aligned_cols=71 Identities=13% Similarity=0.100 Sum_probs=56.8
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEE
Q 021854 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIIC 169 (306)
Q Consensus 96 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~ 169 (306)
..++++|+|.|+ |.+|+.+++.+.+.|++|+++..++........ -+.+..|+.|.+.+.++.+.+|+|..
T Consensus 9 ~~~~~~IlIlG~-G~lg~~la~aa~~lG~~viv~d~~~~~p~~~~a--d~~~~~~~~d~~~l~~~~~~~dvi~~ 79 (377)
T 3orq_A 9 LKFGATIGIIGG-GQLGKMMAQSAQKMGYKVVVLDPSEDCPCRYVA--HEFIQAKYDDEKALNQLGQKCDVITY 79 (377)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCTTCTTGGGS--SEEEECCTTCHHHHHHHHHHCSEEEE
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECCCCChhhhhC--CEEEECCCCCHHHHHHHHHhCCccee
Confidence 345789999998 889999999999999999999876643222222 24677899999999999988998865
|
| >3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=96.69 E-value=0.0034 Score=56.54 Aligned_cols=68 Identities=9% Similarity=-0.070 Sum_probs=49.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcCC
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE 172 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~ 172 (306)
+.++|.|.|+ |.+|..+++.|++.|++|++..|++++.+.....+...+..|+ .++++++|+||.+.+
T Consensus 6 ~~~~I~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~------~e~~~~aDvvi~~vp 73 (303)
T 3g0o_A 6 TDFHVGIVGL-GSMGMGAARSCLRAGLSTWGADLNPQACANLLAEGACGAAASA------REFAGVVDALVILVV 73 (303)
T ss_dssp -CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSEEESSS------TTTTTTCSEEEECCS
T ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCCccccCCH------HHHHhcCCEEEEECC
Confidence 4579999987 9999999999999999999999999875543322332222233 345678899988744
|
| >2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6 | Back alignment and structure |
|---|
Probab=96.69 E-value=0.0039 Score=56.18 Aligned_cols=55 Identities=13% Similarity=0.198 Sum_probs=43.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcCC
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE 172 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~ 172 (306)
+.++|.|.||.|.+|..+++.|.+.|++|+++.|+++. +..++++++|+||.+.+
T Consensus 20 ~~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~~~--------------------~~~~~~~~aDvVilavp 74 (298)
T 2pv7_A 20 DIHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWA--------------------VAESILANADVVIVSVP 74 (298)
T ss_dssp TCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGG--------------------GHHHHHTTCSEEEECSC
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCccc--------------------CHHHHhcCCCEEEEeCC
Confidence 45789999978999999999999999999999887642 23455667777777643
|
| >1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5 | Back alignment and structure |
|---|
Probab=96.68 E-value=0.0012 Score=59.25 Aligned_cols=70 Identities=14% Similarity=0.079 Sum_probs=48.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhc---CCC---ceeeeccCCCHHHHHHHhcCccEEEEcC
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF---GTY---VESMAGDASNKKFLKTALRGVRSIICPS 171 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~---~~~---v~~v~~D~~d~~~l~~~~~~~d~vi~~~ 171 (306)
.+++++|+||+ ++|+++++.|++.| +|++..|+.+++.+.. +.. ...+..|+.+. .+.+.++|++|+++
T Consensus 127 ~~k~vlV~GaG-giG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~~~~~~~~~d~~~~---~~~~~~~DilVn~a 201 (287)
T 1nvt_A 127 KDKNIVIYGAG-GAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFSGL---DVDLDGVDIIINAT 201 (287)
T ss_dssp CSCEEEEECCS-HHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEECT---TCCCTTCCEEEECS
T ss_pred CCCEEEEECch-HHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhcccccceeEEEeeH---HHhhCCCCEEEECC
Confidence 46899999995 99999999999999 9999999987643321 100 00112343331 34567889999984
Q ss_pred C
Q 021854 172 E 172 (306)
Q Consensus 172 ~ 172 (306)
+
T Consensus 202 g 202 (287)
T 1nvt_A 202 P 202 (287)
T ss_dssp C
T ss_pred C
Confidence 4
|
| >4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A* | Back alignment and structure |
|---|
Probab=96.67 E-value=0.0043 Score=60.80 Aligned_cols=84 Identities=14% Similarity=0.153 Sum_probs=66.6
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHH-hcCccEEEEcCCch----
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA-LRGVRSIICPSEGF---- 174 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~-~~~~d~vi~~~~g~---- 174 (306)
++++|.|+ |.+|+.++++|.+.|++|+++.+++++..+. ..++.+|.+|.+.++++ ++.+|++|.+++.-
T Consensus 349 ~~viIiG~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~~----~~~i~gD~t~~~~L~~agi~~ad~vi~~~~~d~~ni 423 (565)
T 4gx0_A 349 ELIFIIGH-GRIGCAAAAFLDRKPVPFILIDRQESPVCND----HVVVYGDATVGQTLRQAGIDRASGIIVTTNDDSTNI 423 (565)
T ss_dssp CCEEEECC-SHHHHHHHHHHHHTTCCEEEEESSCCSSCCS----SCEEESCSSSSTHHHHHTTTSCSEEEECCSCHHHHH
T ss_pred CCEEEECC-CHHHHHHHHHHHHCCCCEEEEECChHHHhhc----CCEEEeCCCCHHHHHhcCccccCEEEEECCCchHHH
Confidence 89999999 9999999999999999999999999875433 27899999999888765 57889999885532
Q ss_pred -hhhcccccCCC-EEE
Q 021854 175 -ISNAGSLKGVQ-HVI 188 (306)
Q Consensus 175 -~~~~a~~~gvk-r~V 188 (306)
..-.+++.+++ ++|
T Consensus 424 ~~~~~ak~l~~~~~ii 439 (565)
T 4gx0_A 424 FLTLACRHLHSHIRIV 439 (565)
T ss_dssp HHHHHHHHHCSSSEEE
T ss_pred HHHHHHHHHCCCCEEE
Confidence 22345555655 444
|
| >3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B* | Back alignment and structure |
|---|
Probab=96.67 E-value=0.0019 Score=57.98 Aligned_cols=67 Identities=13% Similarity=0.131 Sum_probs=48.4
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEecCcchhhhh---cCC--CceeeeccCCCHHHHHHHhcCccEEEEc
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMES---FGT--YVESMAGDASNKKFLKTALRGVRSIICP 170 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~l~R~~~~~~~~---~~~--~v~~v~~D~~d~~~l~~~~~~~d~vi~~ 170 (306)
..+++++|+|+ |++|+.++..|++.|+ +|++..|+.+++++. ++. .+..+ ++.+ + ..++|+||++
T Consensus 124 l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~~~~~~--~~~~---l---~~~aDiIIna 194 (281)
T 3o8q_A 124 LKGATILLIGA-GGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYGEVKAQ--AFEQ---L---KQSYDVIINS 194 (281)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGSCEEEE--EGGG---C---CSCEEEEEEC
T ss_pred ccCCEEEEECc-hHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccCCeeEe--eHHH---h---cCCCCEEEEc
Confidence 35799999998 8999999999999996 999999998875432 221 13332 2222 1 1688999998
Q ss_pred CC
Q 021854 171 SE 172 (306)
Q Consensus 171 ~~ 172 (306)
++
T Consensus 195 Tp 196 (281)
T 3o8q_A 195 TS 196 (281)
T ss_dssp SC
T ss_pred Cc
Confidence 43
|
| >1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6 | Back alignment and structure |
|---|
Probab=96.66 E-value=0.0015 Score=58.41 Aligned_cols=67 Identities=13% Similarity=0.029 Sum_probs=48.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcCC
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE 172 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~ 172 (306)
|.++|.|.|+ |.+|..+++.|.+.|++|.+..|++++.......++.. ..+ +.++++++|+||.+.+
T Consensus 4 M~m~i~iiG~-G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~----~~~---~~~~~~~~D~vi~~v~ 70 (299)
T 1vpd_A 4 MTMKVGFIGL-GIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAET----AST---AKAIAEQCDVIITMLP 70 (299)
T ss_dssp --CEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEE----CSS---HHHHHHHCSEEEECCS
T ss_pred ccceEEEECc-hHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCCCee----cCC---HHHHHhCCCEEEEECC
Confidence 4479999996 99999999999999999999999887654332223321 123 3445667899998855
|
| >3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A | Back alignment and structure |
|---|
Probab=96.66 E-value=0.0023 Score=61.10 Aligned_cols=93 Identities=12% Similarity=0.085 Sum_probs=61.2
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhh--hcCCCceeeeccCCC-------------H-------
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME--SFGTYVESMAGDASN-------------K------- 154 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~--~~~~~v~~v~~D~~d-------------~------- 154 (306)
..+++|+|+||+|.+|...++.+...|++|+++++++++.+. .++. ..+ .|..+ .
T Consensus 227 ~~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~~~lGa--~~v-i~~~~~d~~~~~~~~~~~~~~~~~~~ 303 (456)
T 3krt_A 227 KQGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEICRAMGA--EAI-IDRNAEGYRFWKDENTQDPKEWKRFG 303 (456)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTC--CEE-EETTTTTCCSEEETTEECHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHHHhhCC--cEE-EecCcCcccccccccccchHHHHHHH
Confidence 357899999999999999999888899999999988876432 2332 211 12221 1
Q ss_pred HHHHHHhc--CccEEEEcCCchhh----hcccccCCCEEEEecCcc
Q 021854 155 KFLKTALR--GVRSIICPSEGFIS----NAGSLKGVQHVILLSQLS 194 (306)
Q Consensus 155 ~~l~~~~~--~~d~vi~~~~g~~~----~~a~~~gvkr~V~iSS~~ 194 (306)
+.+.++.. ++|+||.++++... +.++.. .++|.++...
T Consensus 304 ~~i~~~t~g~g~Dvvid~~G~~~~~~~~~~l~~~--G~iv~~G~~~ 347 (456)
T 3krt_A 304 KRIRELTGGEDIDIVFEHPGRETFGASVFVTRKG--GTITTCASTS 347 (456)
T ss_dssp HHHHHHHTSCCEEEEEECSCHHHHHHHHHHEEEE--EEEEESCCTT
T ss_pred HHHHHHhCCCCCcEEEEcCCchhHHHHHHHhhCC--cEEEEEecCC
Confidence 44455443 78999988664322 222233 4788877654
|
| >3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum} | Back alignment and structure |
|---|
Probab=96.65 E-value=0.0023 Score=57.59 Aligned_cols=66 Identities=15% Similarity=0.158 Sum_probs=50.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcCC
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE 172 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~ 172 (306)
.+++++|+|+ |+.|+.++..|.+.|. +|+++.|+.+++++... .+..+ +.+.+.+ + ++|+||++++
T Consensus 121 ~~k~vlvlGa-GGaaraia~~L~~~G~~~v~v~nRt~~ka~~La~-~~~~~-----~~~~l~~-l-~~DivInaTp 187 (282)
T 3fbt_A 121 KNNICVVLGS-GGAARAVLQYLKDNFAKDIYVVTRNPEKTSEIYG-EFKVI-----SYDELSN-L-KGDVIINCTP 187 (282)
T ss_dssp TTSEEEEECS-STTHHHHHHHHHHTTCSEEEEEESCHHHHHHHCT-TSEEE-----EHHHHTT-C-CCSEEEECSS
T ss_pred cCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHH-hcCcc-----cHHHHHh-c-cCCEEEECCc
Confidence 4789999998 8899999999999998 99999999988765433 33322 2334444 4 8999999843
|
| >1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1 | Back alignment and structure |
|---|
Probab=96.64 E-value=0.0025 Score=60.13 Aligned_cols=68 Identities=19% Similarity=0.252 Sum_probs=52.3
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEecCcchhhh---hcCCCceeeeccCCCHHHHHHHhcCccEEEEcCC
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALRGVRSIICPSE 172 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~l~R~~~~~~~---~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~ 172 (306)
..+++|+|.|+ |.+|+.+++.|...|+ +|+++.|+.+++.+ .++ .+.+ + .+++.+.+.++|+||.+++
T Consensus 165 l~g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~g--~~~~--~---~~~l~~~l~~aDvVi~at~ 236 (404)
T 1gpj_A 165 LHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLG--GEAV--R---FDELVDHLARSDVVVSATA 236 (404)
T ss_dssp CTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHT--CEEC--C---GGGHHHHHHTCSEEEECCS
T ss_pred ccCCEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcC--Ccee--c---HHhHHHHhcCCCEEEEccC
Confidence 46899999998 9999999999999998 99999999876432 233 2221 2 2356677789999998844
|
| >3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A* | Back alignment and structure |
|---|
Probab=96.64 E-value=0.0037 Score=57.62 Aligned_cols=37 Identities=19% Similarity=0.167 Sum_probs=30.7
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEecCc
Q 021854 96 EEARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDK 133 (306)
Q Consensus 96 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~l~R~~ 133 (306)
.....+|+|.|+ |++|+++++.|+..|. +++++.++.
T Consensus 31 kL~~~~VlIvGa-GGlGs~va~~La~aGVg~ItlvD~D~ 68 (340)
T 3rui_A 31 IIKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGT 68 (340)
T ss_dssp HHHTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCB
T ss_pred HHhCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEecCCE
Confidence 445799999999 8899999999999996 677765543
|
| >2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A* | Back alignment and structure |
|---|
Probab=96.64 E-value=0.0019 Score=59.85 Aligned_cols=92 Identities=17% Similarity=0.058 Sum_probs=59.0
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCc---chhhhhcCCCceeeeccCCC--HHHHHHHhcCccEEEEcCCc
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK---RNAMESFGTYVESMAGDASN--KKFLKTALRGVRSIICPSEG 173 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~---~~~~~~~~~~v~~v~~D~~d--~~~l~~~~~~~d~vi~~~~g 173 (306)
+++|+|+|| |.+|..+++.+...|++|+++.|+. ++.+....-+...+ | .+ .+.+.+.-.++|+||.++++
T Consensus 181 g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~~~ga~~v--~-~~~~~~~~~~~~~~~d~vid~~g~ 256 (366)
T 2cdc_A 181 CRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVIEETKTNYY--N-SSNGYDKLKDSVGKFDVIIDATGA 256 (366)
T ss_dssp TCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHHHHHTCEEE--E-CTTCSHHHHHHHCCEEEEEECCCC
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHHHHhCCcee--c-hHHHHHHHHHhCCCCCEEEECCCC
Confidence 799999999 9999999999888999999999987 66321111123444 4 43 12232222579999988543
Q ss_pred --hh-hhcccc-cCCCEEEEecCcc
Q 021854 174 --FI-SNAGSL-KGVQHVILLSQLS 194 (306)
Q Consensus 174 --~~-~~~a~~-~gvkr~V~iSS~~ 194 (306)
.+ ..+... ..-.++|+++...
T Consensus 257 ~~~~~~~~~~~l~~~G~iv~~g~~~ 281 (366)
T 2cdc_A 257 DVNILGNVIPLLGRNGVLGLFGFST 281 (366)
T ss_dssp CTHHHHHHGGGEEEEEEEEECSCCC
T ss_pred hHHHHHHHHHHHhcCCEEEEEecCC
Confidence 23 222221 1124788887643
|
| >2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A* | Back alignment and structure |
|---|
Probab=96.64 E-value=0.0052 Score=56.63 Aligned_cols=90 Identities=10% Similarity=0.073 Sum_probs=63.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhh---hcCCCceeeeccCCCHHHHHHHhcCccEEEEcCCc-
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG- 173 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~---~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~g- 173 (306)
.+.+|+|+|+ |.+|...++.+...|++|+++.+++++... .++ ... ..|..+.+.+.++..++|+||.+.++
T Consensus 180 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~lG--a~~-vi~~~~~~~~~~~~~g~D~vid~~g~~ 255 (357)
T 2cf5_A 180 PGLRGGILGL-GGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDLG--ADD-YVIGSDQAKMSELADSLDYVIDTVPVH 255 (357)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTTSC--CSC-EEETTCHHHHHHSTTTEEEEEECCCSC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHcC--Cce-eeccccHHHHHHhcCCCCEEEECCCCh
Confidence 6789999996 999999998888889999999998877432 333 222 23556666677766789999988543
Q ss_pred -hh---hhcccccCCCEEEEecCc
Q 021854 174 -FI---SNAGSLKGVQHVILLSQL 193 (306)
Q Consensus 174 -~~---~~~a~~~gvkr~V~iSS~ 193 (306)
.+ .+..+.. .++|.++..
T Consensus 256 ~~~~~~~~~l~~~--G~iv~~G~~ 277 (357)
T 2cf5_A 256 HALEPYLSLLKLD--GKLILMGVI 277 (357)
T ss_dssp CCSHHHHTTEEEE--EEEEECSCC
T ss_pred HHHHHHHHHhccC--CEEEEeCCC
Confidence 22 2223333 478888754
|
| >3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A* | Back alignment and structure |
|---|
Probab=96.61 E-value=0.0077 Score=56.62 Aligned_cols=70 Identities=11% Similarity=0.187 Sum_probs=56.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEE
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIIC 169 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~ 169 (306)
++++|+|.|+ |.+|+.+++.+.+.|++|+++. ++........+....+..|+.|.+.+.++.+.+|+++.
T Consensus 23 ~~~~I~ilGg-G~lg~~l~~aa~~lG~~v~~~d-~~~~p~~~~ad~~~~~~~~~~d~~~l~~~a~~~d~i~~ 92 (403)
T 3k5i_A 23 NSRKVGVLGG-GQLGRMLVESANRLNIQVNVLD-ADNSPAKQISAHDGHVTGSFKEREAVRQLAKTCDVVTA 92 (403)
T ss_dssp SCCEEEEECC-SHHHHHHHHHHHHHTCEEEEEE-STTCTTGGGCCSSCCEESCTTCHHHHHHHHTTCSEEEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEE-CCCCcHHHhccccceeecCCCCHHHHHHHHHhCCEEEE
Confidence 3689999998 8999999999999999999998 55332222333335678899999999999999998874
|
| >1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8 | Back alignment and structure |
|---|
Probab=96.60 E-value=0.0025 Score=51.03 Aligned_cols=83 Identities=7% Similarity=0.127 Sum_probs=55.0
Q ss_pred CCCeEEEEcCC---ChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcCCch
Q 021854 98 ARDAVLVTDGD---SDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEGF 174 (306)
Q Consensus 98 ~~~~ilVtGat---G~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~g~ 174 (306)
..++|.|.|++ |.+|..+++.|.+.|++|..+.++.++. . +++++ .++.++.+.+|+++.+.+..
T Consensus 13 ~p~~IavIGaS~~~g~~G~~~~~~L~~~G~~V~~vnp~~~~i---~--G~~~~-------~s~~el~~~vDlvii~vp~~ 80 (138)
T 1y81_A 13 EFRKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYDEI---E--GLKCY-------RSVRELPKDVDVIVFVVPPK 80 (138)
T ss_dssp -CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEE---T--TEECB-------SSGGGSCTTCCEEEECSCHH
T ss_pred CCCeEEEEeecCCCCCHHHHHHHHHHHCCCEEEEeCCCCCeE---C--Ceeec-------CCHHHhCCCCCEEEEEeCHH
Confidence 46899999997 8899999999999999977766554222 1 22221 12223344789999885432
Q ss_pred ----hhhcccccCCCEEEEecC
Q 021854 175 ----ISNAGSLKGVQHVILLSQ 192 (306)
Q Consensus 175 ----~~~~a~~~gvkr~V~iSS 192 (306)
+.+.+.+.|++.+++.++
T Consensus 81 ~v~~v~~~~~~~g~~~i~~~~~ 102 (138)
T 1y81_A 81 VGLQVAKEAVEAGFKKLWFQPG 102 (138)
T ss_dssp HHHHHHHHHHHTTCCEEEECTT
T ss_pred HHHHHHHHHHHcCCCEEEEcCc
Confidence 233344578988877664
|
| >3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str} | Back alignment and structure |
|---|
Probab=96.57 E-value=0.0039 Score=58.34 Aligned_cols=72 Identities=10% Similarity=0.001 Sum_probs=54.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccC------------------CCHHHHHH
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDA------------------SNKKFLKT 159 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~------------------~d~~~l~~ 159 (306)
.+.+|+|+|+ |.+|..+++.+...|++|+++.|++++......-+.+++..|+ .+.+.+.+
T Consensus 183 ~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~lGa~~~~l~~~~~~~~gya~~~~~~~~~~~~~~l~e 261 (381)
T 3p2y_A 183 KPASALVLGV-GVAGLQALATAKRLGAKTTGYDVRPEVAEQVRSVGAQWLDLGIDAAGEGGYARELSEAERAQQQQALED 261 (381)
T ss_dssp CCCEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHHTTCEECCCC-------------CHHHHHHHHHHHHH
T ss_pred CCCEEEEECc-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEeccccccccccchhhhhHHHHhhhHHHHHH
Confidence 5689999999 9999999999999999999999998764432222344433221 12456788
Q ss_pred HhcCccEEEEc
Q 021854 160 ALRGVRSIICP 170 (306)
Q Consensus 160 ~~~~~d~vi~~ 170 (306)
+++++|+||.+
T Consensus 262 ~l~~aDIVI~t 272 (381)
T 3p2y_A 262 AITKFDIVITT 272 (381)
T ss_dssp HHTTCSEEEEC
T ss_pred HHhcCCEEEEC
Confidence 99999999976
|
| >1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=96.56 E-value=0.0047 Score=57.33 Aligned_cols=90 Identities=12% Similarity=0.118 Sum_probs=61.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhh--hcCCCceeeeccCCCHHHHHHHhcCccEEEEcCCc--
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME--SFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG-- 173 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~--~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~g-- 173 (306)
.+.+|||+|| |.+|...++.+...|++|+++.+++++.+. .++ ... ..|..+.+.++++..++|+||.+.++
T Consensus 194 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~~lG--a~~-vi~~~~~~~~~~~~~g~Dvvid~~g~~~ 269 (369)
T 1uuf_A 194 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKALG--ADE-VVNSRNADEMAAHLKSFDFILNTVAAPH 269 (369)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHT--CSE-EEETTCHHHHHTTTTCEEEEEECCSSCC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcC--CcE-EeccccHHHHHHhhcCCCEEEECCCCHH
Confidence 5789999998 889999998888899999999998876432 233 222 24566655555555789999988443
Q ss_pred hh---hhcccccCCCEEEEecCc
Q 021854 174 FI---SNAGSLKGVQHVILLSQL 193 (306)
Q Consensus 174 ~~---~~~a~~~gvkr~V~iSS~ 193 (306)
.+ .+.++.. .++|.++..
T Consensus 270 ~~~~~~~~l~~~--G~iv~~G~~ 290 (369)
T 1uuf_A 270 NLDDFTTLLKRD--GTMTLVGAP 290 (369)
T ss_dssp CHHHHHTTEEEE--EEEEECCCC
T ss_pred HHHHHHHHhccC--CEEEEeccC
Confidence 22 2233333 378887654
|
| >1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A* | Back alignment and structure |
|---|
Probab=96.56 E-value=0.0005 Score=61.58 Aligned_cols=35 Identities=11% Similarity=0.266 Sum_probs=28.8
Q ss_pred CCeEEEEcCCChHHHHHHHHHHH-CCCeEEEEecCc
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIV-KRTRIKALVKDK 133 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~-~g~~V~~l~R~~ 133 (306)
+++|+|+|++|.+|+.+++.+.+ .+++++++++..
T Consensus 5 ~mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~~ 40 (273)
T 1dih_A 5 NIRVAIAGAGGRMGRQLIQAALALEGVQLGAALERE 40 (273)
T ss_dssp BEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCT
T ss_pred CcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecC
Confidence 47999999999999999999875 578888665543
|
| >3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP} | Back alignment and structure |
|---|
Probab=96.56 E-value=0.0022 Score=56.13 Aligned_cols=71 Identities=8% Similarity=0.017 Sum_probs=48.6
Q ss_pred CccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcch--------------hhhhcCCCceeeeccCCCHHHHHHH
Q 021854 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN--------------AMESFGTYVESMAGDASNKKFLKTA 160 (306)
Q Consensus 95 ~~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~--------------~~~~~~~~v~~v~~D~~d~~~l~~~ 160 (306)
.....++|.|.|+ |.+|..+++.|++.|++|++..|++++ ..+.... . + .....+..++
T Consensus 15 ~~~~~~kIgiIG~-G~mG~alA~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-~----~-~~~~~~~~e~ 87 (245)
T 3dtt_A 15 LYFQGMKIAVLGT-GTVGRTMAGALADLGHEVTIGTRDPKATLARAEPDAMGAPPFSQWLPE-H----P-HVHLAAFADV 87 (245)
T ss_dssp ----CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHTCC-------CCHHHHGGG-S----T-TCEEEEHHHH
T ss_pred cccCCCeEEEECC-CHHHHHHHHHHHHCCCEEEEEeCChhhhhhhhhhhhhcchhhhHHHhh-c----C-ceeccCHHHH
Confidence 4456799999986 999999999999999999999999876 2211110 0 0 0011234566
Q ss_pred hcCccEEEEcCC
Q 021854 161 LRGVRSIICPSE 172 (306)
Q Consensus 161 ~~~~d~vi~~~~ 172 (306)
++++|+||.+.+
T Consensus 88 ~~~aDvVilavp 99 (245)
T 3dtt_A 88 AAGAELVVNATE 99 (245)
T ss_dssp HHHCSEEEECSC
T ss_pred HhcCCEEEEccC
Confidence 788999998844
|
| >3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=96.56 E-value=0.0011 Score=61.35 Aligned_cols=72 Identities=10% Similarity=0.009 Sum_probs=49.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCC--CeEEEEecCcchhhh----hcCCCceeeeccCCCHHHHHHHhcCccEEEEcC
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRNAME----SFGTYVESMAGDASNKKFLKTALRGVRSIICPS 171 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g--~~V~~l~R~~~~~~~----~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~ 171 (306)
++++|.|+||+|++|+.++..++..| .+|+++.++.+++.. +....+ ...++.-..+..++++++|+||+++
T Consensus 7 ~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~~--~~~~i~~t~d~~~al~dADvVvita 84 (343)
T 3fi9_A 7 TEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCGF--EGLNLTFTSDIKEALTDAKYIVSSG 84 (343)
T ss_dssp CSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHCC--TTCCCEEESCHHHHHTTEEEEEECC
T ss_pred CCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCcC--CCCceEEcCCHHHHhCCCCEEEEcc
Confidence 46899999999999999999999998 489999888765321 110000 0011111124567799999999873
|
| >4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A | Back alignment and structure |
|---|
Probab=96.54 E-value=0.0063 Score=57.62 Aligned_cols=72 Identities=10% Similarity=0.085 Sum_probs=57.1
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEc
Q 021854 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (306)
Q Consensus 96 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~ 170 (306)
..++++|+|.|+ |.+|+.+++.+.+.|++|+++..++........+ +.+..|+.|.+.+.++.+++|+|+.-
T Consensus 32 ~~~~~~IlIlG~-G~lg~~~~~aa~~lG~~v~v~d~~~~~p~~~~ad--~~~~~~~~d~~~l~~~a~~~D~V~~~ 103 (419)
T 4e4t_A 32 ILPGAWLGMVGG-GQLGRMFCFAAQSMGYRVAVLDPDPASPAGAVAD--RHLRAAYDDEAALAELAGLCEAVSTE 103 (419)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCTTCHHHHHSS--EEECCCTTCHHHHHHHHHHCSEEEEC
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEECCCCcCchhhhCC--EEEECCcCCHHHHHHHHhcCCEEEEc
Confidence 346789999998 8999999999999999999987665432222222 45678999999999998999999854
|
| >3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A* | Back alignment and structure |
|---|
Probab=96.53 E-value=0.01 Score=53.71 Aligned_cols=65 Identities=8% Similarity=0.051 Sum_probs=52.1
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcC
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS 171 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~ 171 (306)
+++|.+.|- |.+|..+++.|++.||+|++..|++++.+.....+... .++..++.+++|+||.+.
T Consensus 3 M~kIgfIGl-G~MG~~mA~~L~~~G~~v~v~dr~~~~~~~l~~~Ga~~-------a~s~~e~~~~~dvv~~~l 67 (300)
T 3obb_A 3 MKQIAFIGL-GHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASA-------ARSARDAVQGADVVISML 67 (300)
T ss_dssp CCEEEEECC-STTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEE-------CSSHHHHHTTCSEEEECC
T ss_pred cCEEEEeee-hHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHcCCEE-------cCCHHHHHhcCCceeecC
Confidence 578999987 99999999999999999999999998876554333322 134567788999999873
|
| >3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A | Back alignment and structure |
|---|
Probab=96.50 E-value=0.0055 Score=56.43 Aligned_cols=91 Identities=15% Similarity=0.035 Sum_probs=54.2
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHC-CCeEEEEecCc---c---hhhhhcC---CCceeeeccCCCHHHHHHHhcCccEEE
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVK-RTRIKALVKDK---R---NAMESFG---TYVESMAGDASNKKFLKTALRGVRSII 168 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~-g~~V~~l~R~~---~---~~~~~~~---~~v~~v~~D~~d~~~l~~~~~~~d~vi 168 (306)
+++|.|.||||.+|+++++.|..+ .+++..+.++. + +..+.++ ...+...-++.+.+ .+++++|+||
T Consensus 4 M~kv~IvGatG~vG~~l~~~L~~~p~~el~~l~s~~~~~saGk~~~~~~p~~~~~~~~~v~~~~~~~---~~~~~~Dvvf 80 (337)
T 3dr3_A 4 MLNTLIVGASGYAGAELVTYVNRHPHMNITALTVSAQSNDAGKLISDLHPQLKGIVELPLQPMSDIS---EFSPGVDVVF 80 (337)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTSBHHHHCGGGTTTCCCBEEEESSGG---GTCTTCSEEE
T ss_pred ceEEEEECCCChHHHHHHHHHHhCCCCcEEEEEecCchhhcCCchHHhCccccCccceeEeccCCHH---HHhcCCCEEE
Confidence 478999999999999999999884 46887775443 1 1222211 11111111110222 2237899999
Q ss_pred EcCCchh----hhcccccCCCEEEEecCc
Q 021854 169 CPSEGFI----SNAGSLKGVQHVILLSQL 193 (306)
Q Consensus 169 ~~~~g~~----~~~a~~~gvkr~V~iSS~ 193 (306)
.+.+... .....++|+ ++|-.|+.
T Consensus 81 ~a~p~~~s~~~~~~~~~~g~-~vIDlSa~ 108 (337)
T 3dr3_A 81 LATAHEVSHDLAPQFLEAGC-VVFDLSGA 108 (337)
T ss_dssp ECSCHHHHHHHHHHHHHTTC-EEEECSST
T ss_pred ECCChHHHHHHHHHHHHCCC-EEEEcCCc
Confidence 9866542 223345676 46777775
|
| >1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=96.49 E-value=0.0066 Score=55.96 Aligned_cols=91 Identities=15% Similarity=0.074 Sum_probs=60.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHC-CCeEEEEecCcchhhh--hcCCCceeeeccCCCH--HHHHHHhc--CccEEEEc
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVK-RTRIKALVKDKRNAME--SFGTYVESMAGDASNK--KFLKTALR--GVRSIICP 170 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~-g~~V~~l~R~~~~~~~--~~~~~v~~v~~D~~d~--~~l~~~~~--~~d~vi~~ 170 (306)
.+.+|||+|| |.+|...++.+... |++|+++.+++++.+. .++ ... ..|..+. +.+.++.. ++|+||.+
T Consensus 186 ~g~~VlV~Ga-G~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~~~lG--a~~-vi~~~~~~~~~v~~~~~g~g~Dvvid~ 261 (359)
T 1h2b_A 186 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERLG--ADH-VVDARRDPVKQVMELTRGRGVNVAMDF 261 (359)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHHTT--CSE-EEETTSCHHHHHHHHTTTCCEEEEEES
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhC--CCE-EEeccchHHHHHHHHhCCCCCcEEEEC
Confidence 5789999999 99999999877778 9999999998876432 233 222 2345443 34444443 68999988
Q ss_pred CCch---hh-hcccccCCCEEEEecCc
Q 021854 171 SEGF---IS-NAGSLKGVQHVILLSQL 193 (306)
Q Consensus 171 ~~g~---~~-~~a~~~gvkr~V~iSS~ 193 (306)
.++. .. .+.+. .-.++|.++..
T Consensus 262 ~G~~~~~~~~~~~~~-~~G~~v~~g~~ 287 (359)
T 1h2b_A 262 VGSQATVDYTPYLLG-RMGRLIIVGYG 287 (359)
T ss_dssp SCCHHHHHHGGGGEE-EEEEEEECCCS
T ss_pred CCCchHHHHHHHhhc-CCCEEEEEeCC
Confidence 5543 33 33333 34578877653
|
| >1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A* | Back alignment and structure |
|---|
Probab=96.48 E-value=0.008 Score=56.22 Aligned_cols=74 Identities=12% Similarity=-0.063 Sum_probs=52.1
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCC----------------------CH
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDAS----------------------NK 154 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~----------------------d~ 154 (306)
..+++|+|+|+ |.+|..+++.+...|++|++..|++.+......-+.+++..|.. +.
T Consensus 170 l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~~~~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~~ 248 (384)
T 1l7d_A 170 VPPARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQA 248 (384)
T ss_dssp ECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHHTTCEECCC-----------------------CCHH
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEeecccccccccccccchhhcCHHHHhhhH
Confidence 35799999997 99999999999999999999999886633221112233211221 12
Q ss_pred HHHHHHhcCccEEEEcC
Q 021854 155 KFLKTALRGVRSIICPS 171 (306)
Q Consensus 155 ~~l~~~~~~~d~vi~~~ 171 (306)
+.+.+.++++|+||+++
T Consensus 249 ~~l~~~~~~aDvVi~~~ 265 (384)
T 1l7d_A 249 EAVLKELVKTDIAITTA 265 (384)
T ss_dssp HHHHHHHTTCSEEEECC
T ss_pred HHHHHHhCCCCEEEECC
Confidence 34778889999999874
|
| >3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=96.48 E-value=0.0027 Score=57.42 Aligned_cols=67 Identities=15% Similarity=0.083 Sum_probs=50.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcCC
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE 172 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~ 172 (306)
+.++|.|.|. |.+|..+++.|++.|++|++..|++++.......++.. . .++.++++++|+||.+.+
T Consensus 8 ~~~~IgiIG~-G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~----~---~~~~e~~~~aDvVi~~vp 74 (306)
T 3l6d_A 8 FEFDVSVIGL-GAMGTIMAQVLLKQGKRVAIWNRSPGKAAALVAAGAHL----C---ESVKAALSASPATIFVLL 74 (306)
T ss_dssp CSCSEEEECC-SHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTCEE----C---SSHHHHHHHSSEEEECCS
T ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCee----c---CCHHHHHhcCCEEEEEeC
Confidence 4578999987 99999999999999999999999998755432222221 1 234556777899998844
|
| >1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6 | Back alignment and structure |
|---|
Probab=96.47 E-value=0.0025 Score=57.82 Aligned_cols=73 Identities=8% Similarity=0.032 Sum_probs=50.4
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEec--CcchhhhhcCCCc------eeeeccCCCHHHHHHHhcCccEEEEcC
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVK--DKRNAMESFGTYV------ESMAGDASNKKFLKTALRGVRSIICPS 171 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R--~~~~~~~~~~~~v------~~v~~D~~d~~~l~~~~~~~d~vi~~~ 171 (306)
|+|.|.|+ |.+|..++..|++.|++|+++.| ++++......... +.....+.+.+++.++++++|+||.+.
T Consensus 1 m~I~iiG~-G~mG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~D~vi~~v 79 (335)
T 1txg_A 1 MIVSILGA-GAMGSALSVPLVDNGNEVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLENAEVVLLGV 79 (335)
T ss_dssp CEEEEESC-CHHHHHHHHHHHHHCCEEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHTTCSEEEECS
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCCeEEEEEccCCHHHHHHHHHhCcCcccCccccceEEecHHhHHHHHhcCCEEEEcC
Confidence 47999998 99999999999999999999999 7766443322211 100001222235566788999999985
Q ss_pred Cc
Q 021854 172 EG 173 (306)
Q Consensus 172 ~g 173 (306)
+.
T Consensus 80 ~~ 81 (335)
T 1txg_A 80 ST 81 (335)
T ss_dssp CG
T ss_pred Ch
Confidence 43
|
| >2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A | Back alignment and structure |
|---|
Probab=96.45 E-value=0.0026 Score=56.75 Aligned_cols=67 Identities=15% Similarity=0.211 Sum_probs=49.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCC-CceeeeccCCCHHHHHHHhcCccEEEEcCC
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGT-YVESMAGDASNKKFLKTALRGVRSIICPSE 172 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~-~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~ 172 (306)
.+++|+|.|+ |.+|+.+++.|.+.|++|.+..|+.+++.+.... ++.. .+ ++.++++++|+||++++
T Consensus 128 ~~~~v~iiGa-G~~g~aia~~L~~~g~~V~v~~r~~~~~~~l~~~~g~~~--~~-----~~~~~~~~aDiVi~atp 195 (275)
T 2hk9_A 128 KEKSILVLGA-GGASRAVIYALVKEGAKVFLWNRTKEKAIKLAQKFPLEV--VN-----SPEEVIDKVQVIVNTTS 195 (275)
T ss_dssp GGSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSHHHHHHHTTTSCEEE--CS-----CGGGTGGGCSEEEECSS
T ss_pred CCCEEEEECc-hHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHcCCee--eh-----hHHhhhcCCCEEEEeCC
Confidence 4689999997 8999999999999999999999998775543321 2221 11 23456678999998843
|
| >1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6 | Back alignment and structure |
|---|
Probab=96.45 E-value=0.0033 Score=57.54 Aligned_cols=74 Identities=12% Similarity=0.033 Sum_probs=49.7
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCC-Cceeee------ccCC-CHHHHHHHhcCccEEEEc
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGT-YVESMA------GDAS-NKKFLKTALRGVRSIICP 170 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~-~v~~v~------~D~~-d~~~l~~~~~~~d~vi~~ 170 (306)
.++|+|.|+ |.+|..++..|.+.|++|+++.|++++....... .+.+.. ..+. -..++.++++++|+||.+
T Consensus 4 ~mki~iiG~-G~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~ 82 (359)
T 1bg6_A 4 SKTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDADVILIV 82 (359)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTTCSEEEEC
T ss_pred cCeEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHhcCCeEEeccccccccccceecCCHHHHHhcCCEEEEe
Confidence 479999998 9999999999999999999999988764332111 111110 0010 112344567899999988
Q ss_pred CCc
Q 021854 171 SEG 173 (306)
Q Consensus 171 ~~g 173 (306)
.+.
T Consensus 83 v~~ 85 (359)
T 1bg6_A 83 VPA 85 (359)
T ss_dssp SCG
T ss_pred CCc
Confidence 553
|
| >1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A | Back alignment and structure |
|---|
Probab=96.45 E-value=0.0092 Score=52.49 Aligned_cols=93 Identities=14% Similarity=0.128 Sum_probs=60.3
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEecCc-------------------chhh---h---hcCCCc--eeee
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDK-------------------RNAM---E---SFGTYV--ESMA 148 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~l~R~~-------------------~~~~---~---~~~~~v--~~v~ 148 (306)
....+|+|.|+ |++|+++++.|+..|. +++++.++. .|+. + ...+.+ +.+.
T Consensus 26 l~~~~VlvvG~-GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~ 104 (251)
T 1zud_1 26 LLDSQVLIIGL-GGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTALQ 104 (251)
T ss_dssp HHTCEEEEECC-STTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEEC
T ss_pred HhcCcEEEEcc-CHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCCCEEEEEe
Confidence 34689999999 7799999999999997 666664432 2211 1 112233 3333
Q ss_pred ccCCCHHHHHHHhcCccEEEEcCCch-----hhhcccccCCCEEEEecC
Q 021854 149 GDASNKKFLKTALRGVRSIICPSEGF-----ISNAGSLKGVQHVILLSQ 192 (306)
Q Consensus 149 ~D~~d~~~l~~~~~~~d~vi~~~~g~-----~~~~a~~~gvkr~V~iSS 192 (306)
.++ +.+.+.+.++++|+||.+.... +.+++.+.++. +|..+.
T Consensus 105 ~~~-~~~~~~~~~~~~DvVi~~~d~~~~r~~l~~~~~~~~~p-~i~~~~ 151 (251)
T 1zud_1 105 QRL-TGEALKDAVARADVVLDCTDNMATRQEINAACVALNTP-LITASA 151 (251)
T ss_dssp SCC-CHHHHHHHHHHCSEEEECCSSHHHHHHHHHHHHHTTCC-EEEEEE
T ss_pred ccC-CHHHHHHHHhcCCEEEECCCCHHHHHHHHHHHHHhCCC-EEEEec
Confidence 344 3467788889999999885543 44556666665 555443
|
| >3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri} | Back alignment and structure |
|---|
Probab=96.43 E-value=0.0038 Score=55.82 Aligned_cols=66 Identities=9% Similarity=0.044 Sum_probs=48.8
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcCC
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE 172 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~ 172 (306)
.++|.|.|+ |.+|..+++.|++.|++|++..|++++.......++.. ..+ +.++++++|+||.+.+
T Consensus 4 ~~~i~iiG~-G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~----~~~---~~~~~~~~D~vi~~vp 69 (301)
T 3cky_A 4 SIKIGFIGL-GAMGKPMAINLLKEGVTVYAFDLMEANVAAVVAQGAQA----CEN---NQKVAAASDIIFTSLP 69 (301)
T ss_dssp CCEEEEECC-CTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHTTTCEE----CSS---HHHHHHHCSEEEECCS
T ss_pred CCEEEEECc-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCee----cCC---HHHHHhCCCEEEEECC
Confidence 478999996 99999999999999999999999887754433323331 122 3445667899998854
|
| >3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa} | Back alignment and structure |
|---|
Probab=96.43 E-value=0.024 Score=52.08 Aligned_cols=95 Identities=13% Similarity=-0.035 Sum_probs=59.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCe-EEEEecCcchhhh--hcCCCceeeeccCCCHHHHH----HHh--cCccEEE
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTR-IKALVKDKRNAME--SFGTYVESMAGDASNKKFLK----TAL--RGVRSII 168 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~-V~~l~R~~~~~~~--~~~~~v~~v~~D~~d~~~l~----~~~--~~~d~vi 168 (306)
.+++|||+|| |.+|...++.+...|++ |+++.+++++.+. .+.+.+..+..|-.+.+.+. +.. +++|++|
T Consensus 179 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~v~~~t~g~g~Dvvi 257 (363)
T 3m6i_A 179 LGDPVLICGA-GPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEICPEVVTHKVERLSAEESAKKIVESFGGIEPAVAL 257 (363)
T ss_dssp TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHHCTTCEEEECCSCCHHHHHHHHHHHTSSCCCSEEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhchhcccccccccchHHHHHHHHHHhCCCCCCEEE
Confidence 5789999998 99999999888889987 8888888876321 12333333333333334333 333 2689999
Q ss_pred EcCCch--hhhcccc-cCCCEEEEecCc
Q 021854 169 CPSEGF--ISNAGSL-KGVQHVILLSQL 193 (306)
Q Consensus 169 ~~~~g~--~~~~a~~-~gvkr~V~iSS~ 193 (306)
.+.++. +..+... ..-.++|.++..
T Consensus 258 d~~g~~~~~~~~~~~l~~~G~iv~~G~~ 285 (363)
T 3m6i_A 258 ECTGVESSIAAAIWAVKFGGKVFVIGVG 285 (363)
T ss_dssp ECSCCHHHHHHHHHHSCTTCEEEECCCC
T ss_pred ECCCChHHHHHHHHHhcCCCEEEEEccC
Confidence 885543 2222211 223588888653
|
| >3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=96.43 E-value=0.0037 Score=56.19 Aligned_cols=65 Identities=3% Similarity=-0.172 Sum_probs=49.2
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcCC
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE 172 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~ 172 (306)
.++|.|.|. |.+|..+++.|++.|++|++..|++++.+.....++.. ..+++++++ +|+||.+.+
T Consensus 15 ~~~I~vIG~-G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~-------~~~~~~~~~-aDvvi~~vp 79 (296)
T 3qha_A 15 QLKLGYIGL-GNMGAPMATRMTEWPGGVTVYDIRIEAMTPLAEAGATL-------ADSVADVAA-ADLIHITVL 79 (296)
T ss_dssp CCCEEEECC-STTHHHHHHHHTTSTTCEEEECSSTTTSHHHHHTTCEE-------CSSHHHHTT-SSEEEECCS
T ss_pred CCeEEEECc-CHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCEE-------cCCHHHHHh-CCEEEEECC
Confidence 478999987 99999999999999999999999998755433223322 123455667 899988744
|
| >1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A | Back alignment and structure |
|---|
Probab=96.39 E-value=0.0032 Score=58.08 Aligned_cols=90 Identities=11% Similarity=0.117 Sum_probs=58.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhh--hcCCCceeeeccCCCH-HHHHHHhcCccEEEEcCCc-
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME--SFGTYVESMAGDASNK-KFLKTALRGVRSIICPSEG- 173 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~--~~~~~v~~v~~D~~d~-~~l~~~~~~~d~vi~~~~g- 173 (306)
.+++|||+|| |.+|...++.+...|++|+++.+++++.+. .++ ...+ .|..+. +..+.+..++|+||.+.++
T Consensus 179 ~g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~lG--a~~v-~~~~~~~~~~~~~~~~~D~vid~~g~~ 254 (360)
T 1piw_A 179 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAMKMG--ADHY-IATLEEGDWGEKYFDTFDLIVVCASSL 254 (360)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHT--CSEE-EEGGGTSCHHHHSCSCEEEEEECCSCS
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcC--CCEE-EcCcCchHHHHHhhcCCCEEEECCCCC
Confidence 5789999999 999999998888899999999998876432 233 2221 244332 2233333589999988543
Q ss_pred --h-hh---hcccccCCCEEEEecCc
Q 021854 174 --F-IS---NAGSLKGVQHVILLSQL 193 (306)
Q Consensus 174 --~-~~---~~a~~~gvkr~V~iSS~ 193 (306)
. +. +.++.. .++|.++..
T Consensus 255 ~~~~~~~~~~~l~~~--G~iv~~g~~ 278 (360)
T 1piw_A 255 TDIDFNIMPKAMKVG--GRIVSISIP 278 (360)
T ss_dssp TTCCTTTGGGGEEEE--EEEEECCCC
T ss_pred cHHHHHHHHHHhcCC--CEEEEecCC
Confidence 2 22 222333 478877654
|
| >2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A* | Back alignment and structure |
|---|
Probab=96.38 E-value=0.004 Score=55.57 Aligned_cols=65 Identities=11% Similarity=-0.070 Sum_probs=48.3
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcCC
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE 172 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~ 172 (306)
|+|.|.|+ |.+|..+++.|++.|++|++..|++++.......++.+ ..+ ..++++++|+||.+.+
T Consensus 1 m~i~iiG~-G~mG~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~----~~~---~~~~~~~~Dvvi~~vp 65 (296)
T 2gf2_A 1 MPVGFIGL-GNMGNPMAKNLMKHGYPLIIYDVFPDACKEFQDAGEQV----VSS---PADVAEKADRIITMLP 65 (296)
T ss_dssp CCEEEECC-STTHHHHHHHHHHTTCCEEEECSSTHHHHHHHTTTCEE----CSS---HHHHHHHCSEEEECCS
T ss_pred CeEEEEec-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCee----cCC---HHHHHhcCCEEEEeCC
Confidence 47999987 99999999999999999999999987755443333332 122 3445667899998853
|
| >4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans} | Back alignment and structure |
|---|
Probab=96.38 E-value=0.0032 Score=56.89 Aligned_cols=66 Identities=6% Similarity=-0.035 Sum_probs=42.3
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEc
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~ 170 (306)
.|.++|.+.|- |.+|..+++.|++.||+|++..|++++.+.....+.+.. ++..++++.+|+||.+
T Consensus 3 ~Ms~kIgfIGL-G~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~-------~s~~e~~~~~dvvi~~ 68 (297)
T 4gbj_A 3 AMSEKIAFLGL-GNLGTPIAEILLEAGYELVVWNRTASKAEPLTKLGATVV-------ENAIDAITPGGIVFSV 68 (297)
T ss_dssp -CCCEEEEECC-STTHHHHHHHHHHTTCEEEEC-------CTTTTTTCEEC-------SSGGGGCCTTCEEEEC
T ss_pred CCCCcEEEEec-HHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCeEe-------CCHHHHHhcCCceeee
Confidence 35679999987 999999999999999999999999988654433333221 1233455667777766
|
| >3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens} | Back alignment and structure |
|---|
Probab=96.37 E-value=0.0024 Score=57.02 Aligned_cols=65 Identities=6% Similarity=-0.077 Sum_probs=48.7
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcCC
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE 172 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~ 172 (306)
++|.|.|+ |.+|..+++.|++.|++|++..|++++.+.....++.. . .+..++++++|+||.+.+
T Consensus 2 ~~I~iiG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~----~---~~~~~~~~~advvi~~v~ 66 (287)
T 3pdu_A 2 TTYGFLGL-GIMGGPMAANLVRAGFDVTVWNRNPAKCAPLVALGARQ----A---SSPAEVCAACDITIAMLA 66 (287)
T ss_dssp CCEEEECC-STTHHHHHHHHHHHTCCEEEECSSGGGGHHHHHHTCEE----C---SCHHHHHHHCSEEEECCS
T ss_pred CeEEEEcc-CHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCee----c---CCHHHHHHcCCEEEEEcC
Confidence 68999986 99999999999999999999999998755432222221 1 234456677899998844
|
| >2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae} | Back alignment and structure |
|---|
Probab=96.37 E-value=0.0031 Score=50.87 Aligned_cols=81 Identities=6% Similarity=0.035 Sum_probs=52.9
Q ss_pred CCeEEEEcCC---ChHHHHHHHHHHHCCCeEEEEecCc--chhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcCCc
Q 021854 99 RDAVLVTDGD---SDIGQMVILSLIVKRTRIKALVKDK--RNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG 173 (306)
Q Consensus 99 ~~~ilVtGat---G~iG~~l~~~L~~~g~~V~~l~R~~--~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~g 173 (306)
.++|.|.|++ |.+|..+++.|.+.|++|..+.+.. +.. . +++++ -++.+ +.+.+|+++.+.+.
T Consensus 13 p~~IavIGas~~~g~~G~~~~~~L~~~G~~v~~vnp~~~g~~i---~--G~~~~-~sl~e------l~~~~Dlvii~vp~ 80 (145)
T 2duw_A 13 TRTIALVGASDKPDRPSYRVMKYLLDQGYHVIPVSPKVAGKTL---L--GQQGY-ATLAD------VPEKVDMVDVFRNS 80 (145)
T ss_dssp CCCEEEESCCSCTTSHHHHHHHHHHHHTCCEEEECSSSTTSEE---T--TEECC-SSTTT------CSSCCSEEECCSCS
T ss_pred CCEEEEECcCCCCCChHHHHHHHHHHCCCEEEEeCCccccccc---C--Ceecc-CCHHH------cCCCCCEEEEEeCH
Confidence 5789999998 7899999999999999977665544 221 1 22221 12322 23478999987443
Q ss_pred h----hhhcccccCCCEEEEec
Q 021854 174 F----ISNAGSLKGVQHVILLS 191 (306)
Q Consensus 174 ~----~~~~a~~~gvkr~V~iS 191 (306)
. +.+.+.+.|++.+++.+
T Consensus 81 ~~v~~v~~~~~~~g~~~i~i~~ 102 (145)
T 2duw_A 81 EAAWGVAQEAIAIGAKTLWLQL 102 (145)
T ss_dssp THHHHHHHHHHHHTCCEEECCT
T ss_pred HHHHHHHHHHHHcCCCEEEEcC
Confidence 2 23334457898876643
|
| >2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A* | Back alignment and structure |
|---|
Probab=96.37 E-value=0.003 Score=61.60 Aligned_cols=68 Identities=13% Similarity=0.158 Sum_probs=43.7
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh---cCCCceeeeccCCCHHHHHH-HhcCccEEEEcCC
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKT-ALRGVRSIICPSE 172 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~---~~~~v~~v~~D~~d~~~l~~-~~~~~d~vi~~~~ 172 (306)
..+++++|||| |++|++++..|++.|++|+++.|+.+++.+. ++..+ + ++.| +.. ....+|++|++++
T Consensus 362 l~~k~vlV~Ga-GGig~aia~~L~~~G~~V~i~~R~~~~a~~la~~~~~~~--~--~~~d---l~~~~~~~~DilVN~ag 433 (523)
T 2o7s_A 362 LASKTVVVIGA-GGAGKALAYGAKEKGAKVVIANRTYERALELAEAIGGKA--L--SLTD---LDNYHPEDGMVLANTTS 433 (523)
T ss_dssp ----CEEEECC-SHHHHHHHHHHHHHCC-CEEEESSHHHHHHHHHHTTC-C--E--ETTT---TTTC--CCSEEEEECSS
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCce--e--eHHH---hhhccccCceEEEECCC
Confidence 34689999999 7999999999999999999999998774432 22222 1 2222 111 1245799998844
|
| >3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus} | Back alignment and structure |
|---|
Probab=96.35 E-value=0.009 Score=54.71 Aligned_cols=90 Identities=11% Similarity=0.133 Sum_probs=58.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhh--hcCCCceeeeccCCC--HHHHHHHh-cCccEEEEcCC
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME--SFGTYVESMAGDASN--KKFLKTAL-RGVRSIICPSE 172 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~--~~~~~v~~v~~D~~d--~~~l~~~~-~~~d~vi~~~~ 172 (306)
.+++|||+||+|.+|...++.+...|++|+++++++++.+. .++ ...+ .|..+ .+.+.+.- +++|+||.+.+
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lG--a~~v-i~~~~~~~~~~~~~~~~g~Dvv~d~~g 226 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKKMG--ADIV-LNHKESLLNQFKTQGIELVDYVFCTFN 226 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHHHT--CSEE-ECTTSCHHHHHHHHTCCCEEEEEESSC
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcC--CcEE-EECCccHHHHHHHhCCCCccEEEECCC
Confidence 57899999999999999999888899999999998876332 233 2222 23332 23343331 36899998855
Q ss_pred ch-h-h---hcccccCCCEEEEecC
Q 021854 173 GF-I-S---NAGSLKGVQHVILLSQ 192 (306)
Q Consensus 173 g~-~-~---~~a~~~gvkr~V~iSS 192 (306)
+. . . +..... .++|.+++
T Consensus 227 ~~~~~~~~~~~l~~~--G~iv~~~~ 249 (346)
T 3fbg_A 227 TDMYYDDMIQLVKPR--GHIATIVA 249 (346)
T ss_dssp HHHHHHHHHHHEEEE--EEEEESSC
T ss_pred chHHHHHHHHHhccC--CEEEEECC
Confidence 42 1 1 223333 46776654
|
| >1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A* | Back alignment and structure |
|---|
Probab=96.34 E-value=0.0023 Score=60.89 Aligned_cols=71 Identities=8% Similarity=-0.057 Sum_probs=48.5
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceee-------------eccCCCHHHHHHHhcCccE
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESM-------------AGDASNKKFLKTALRGVRS 166 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v-------------~~D~~d~~~l~~~~~~~d~ 166 (306)
|+|.|.|+ |.+|..++..|++.|++|+++.|++++..........+. .+.+.-..++.++++++|+
T Consensus 1 mkI~VIG~-G~vG~~~A~~la~~G~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~g~l~~t~~~~~~~~~aDv 79 (436)
T 1mv8_A 1 MRISIFGL-GYVGAVCAGCLSARGHEVIGVDVSSTKIDLINQGKSPIVEPGLEALLQQGRQTGRLSGTTDFKKAVLDSDV 79 (436)
T ss_dssp CEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHHTCSE
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHhhcccCceEEeCCHHHHhccCCE
Confidence 47999986 999999999999999999999999887544322111110 0111111234456778999
Q ss_pred EEEcC
Q 021854 167 IICPS 171 (306)
Q Consensus 167 vi~~~ 171 (306)
||.+.
T Consensus 80 viiaV 84 (436)
T 1mv8_A 80 SFICV 84 (436)
T ss_dssp EEECC
T ss_pred EEEEc
Confidence 99883
|
| >3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=96.34 E-value=0.0024 Score=61.13 Aligned_cols=72 Identities=10% Similarity=0.055 Sum_probs=49.7
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceee-------------eccCCCHHHHHHHhcCcc
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESM-------------AGDASNKKFLKTALRGVR 165 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v-------------~~D~~d~~~l~~~~~~~d 165 (306)
.|+|.|.|+ |.+|..++..|++.|++|+++.|++++..........+. .+.+.-..++.++++++|
T Consensus 2 ~mkI~VIG~-G~vG~~lA~~La~~G~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~l~~~~~~~~l~~t~d~~ea~~~aD 80 (450)
T 3gg2_A 2 SLDIAVVGI-GYVGLVSATCFAELGANVRCIDTDRNKIEQLNSGTIPIYEPGLEKMIARNVKAGRLRFGTEIEQAVPEAD 80 (450)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTCSCCCSTTHHHHHHHHHHTTSEEEESCHHHHGGGCS
T ss_pred CCEEEEECc-CHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHcCCCcccCCCHHHHHHhhcccCcEEEECCHHHHHhcCC
Confidence 479999988 999999999999999999999999987443221100000 011111123456788999
Q ss_pred EEEEcC
Q 021854 166 SIICPS 171 (306)
Q Consensus 166 ~vi~~~ 171 (306)
+||.+.
T Consensus 81 vViiaV 86 (450)
T 3gg2_A 81 IIFIAV 86 (450)
T ss_dssp EEEECC
T ss_pred EEEEEc
Confidence 999883
|
| >4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A* | Back alignment and structure |
|---|
Probab=96.32 E-value=0.0074 Score=59.14 Aligned_cols=72 Identities=17% Similarity=0.196 Sum_probs=62.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCC-CceeeeccCCCHHHHHHH-hcCccEEEEc
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGT-YVESMAGDASNKKFLKTA-LRGVRSIICP 170 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~-~v~~v~~D~~d~~~l~~~-~~~~d~vi~~ 170 (306)
..+.|+|.|+ |.+|+.++++|.+.|++|+++..+++........ ++.++.+|.++++.++++ ++.+|.+|..
T Consensus 126 ~~~hviI~G~-g~~g~~la~~L~~~~~~vvvid~~~~~~~~~~~~~~~~~i~Gd~~~~~~L~~a~i~~a~~vi~t 199 (565)
T 4gx0_A 126 TRGHILIFGI-DPITRTLIRKLESRNHLFVVVTDNYDQALHLEEQEGFKVVYGSPTDAHVLAGLRVAAARSIIAN 199 (565)
T ss_dssp CCSCEEEESC-CHHHHHHHHHTTTTTCCEEEEESCHHHHHHHHHSCSSEEEESCTTCHHHHHHTTGGGCSEEEEC
T ss_pred cCCeEEEECC-ChHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhcCCeEEEeCCCCHHHHHhcCcccCCEEEEe
Confidence 4689999998 8999999999999999999999999876555445 789999999999998876 5778999874
|
| >1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A | Back alignment and structure |
|---|
Probab=96.31 E-value=0.019 Score=45.90 Aligned_cols=84 Identities=15% Similarity=-0.062 Sum_probs=53.3
Q ss_pred CCeEEEEcCC---ChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcCCch-
Q 021854 99 RDAVLVTDGD---SDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEGF- 174 (306)
Q Consensus 99 ~~~ilVtGat---G~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~g~- 174 (306)
.++|+|.|++ |.+|..+++.|.+.||+|..+ ++.+..+.. .++.++ .++.++-+.+|.++.+.+..
T Consensus 13 p~~vaVvGas~~~g~~G~~~~~~l~~~G~~v~~v--np~~~~~~i-~G~~~~-------~sl~el~~~vDlavi~vp~~~ 82 (140)
T 1iuk_A 13 AKTIAVLGAHKDPSRPAHYVPRYLREQGYRVLPV--NPRFQGEEL-FGEEAV-------ASLLDLKEPVDILDVFRPPSA 82 (140)
T ss_dssp CCEEEEETCCSSTTSHHHHHHHHHHHTTCEEEEE--CGGGTTSEE-TTEECB-------SSGGGCCSCCSEEEECSCHHH
T ss_pred CCEEEEECCCCCCCChHHHHHHHHHHCCCEEEEe--CCCcccCcC-CCEEec-------CCHHHCCCCCCEEEEEeCHHH
Confidence 6899999998 789999999999999985554 554311111 122221 12222234789999874432
Q ss_pred ---hhhcccccCCCEEEEecC
Q 021854 175 ---ISNAGSLKGVQHVILLSQ 192 (306)
Q Consensus 175 ---~~~~a~~~gvkr~V~iSS 192 (306)
+.+.+.+.|++.+++.++
T Consensus 83 ~~~v~~~~~~~gi~~i~~~~g 103 (140)
T 1iuk_A 83 LMDHLPEVLALRPGLVWLQSG 103 (140)
T ss_dssp HTTTHHHHHHHCCSCEEECTT
T ss_pred HHHHHHHHHHcCCCEEEEcCC
Confidence 334455688988776543
|
| >1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A* | Back alignment and structure |
|---|
Probab=96.30 E-value=0.0082 Score=56.56 Aligned_cols=73 Identities=12% Similarity=0.055 Sum_probs=51.9
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCC-------------CH-------HH
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDAS-------------NK-------KF 156 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~-------------d~-------~~ 156 (306)
..+++|+|+|+ |.+|..+++.+...|++|+++.|++++......-+.+++..|.. +. +.
T Consensus 170 l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~~~lGa~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 248 (401)
T 1x13_A 170 VPPAKVMVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQSMGAEFLELDFKEEAGSGDGYAKVMSDAFIKAEMEL 248 (401)
T ss_dssp ECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCGGGHHHHHHTTCEECCC--------CCHHHHHHSHHHHHHHHHH
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCEEEEecccccccccccchhhccHHHHHHHHHH
Confidence 35799999998 99999999999999999999999887643221113344332321 11 24
Q ss_pred HHHHhcCccEEEEc
Q 021854 157 LKTALRGVRSIICP 170 (306)
Q Consensus 157 l~~~~~~~d~vi~~ 170 (306)
+.+.+.++|+||.+
T Consensus 249 l~e~~~~aDvVI~~ 262 (401)
T 1x13_A 249 FAAQAKEVDIIVTT 262 (401)
T ss_dssp HHHHHHHCSEEEEC
T ss_pred HHHHhCCCCEEEEC
Confidence 67788889999977
|
| >3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=96.30 E-value=0.0048 Score=56.61 Aligned_cols=89 Identities=11% Similarity=0.146 Sum_probs=58.1
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcCCch--
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEGF-- 174 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~g~-- 174 (306)
..+++|||+|| |.+|...++.+...|++|+++.+++++.+....-+...+. .+.+.+.+ ++|+||.+.++.
T Consensus 175 ~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~v~---~~~~~~~~---~~D~vid~~g~~~~ 247 (348)
T 3two_A 175 TKGTKVGVAGF-GGLGSMAVKYAVAMGAEVSVFARNEHKKQDALSMGVKHFY---TDPKQCKE---ELDFIISTIPTHYD 247 (348)
T ss_dssp CTTCEEEEESC-SHHHHHHHHHHHHTTCEEEEECSSSTTHHHHHHTTCSEEE---SSGGGCCS---CEEEEEECCCSCCC
T ss_pred CCCCEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhcCCCeec---CCHHHHhc---CCCEEEECCCcHHH
Confidence 35789999998 9999999988888999999999988774322212233333 33333322 899999884432
Q ss_pred hh---hcccccCCCEEEEecCcc
Q 021854 175 IS---NAGSLKGVQHVILLSQLS 194 (306)
Q Consensus 175 ~~---~~a~~~gvkr~V~iSS~~ 194 (306)
+. +..+.. .++|.++...
T Consensus 248 ~~~~~~~l~~~--G~iv~~G~~~ 268 (348)
T 3two_A 248 LKDYLKLLTYN--GDLALVGLPP 268 (348)
T ss_dssp HHHHHTTEEEE--EEEEECCCCC
T ss_pred HHHHHHHHhcC--CEEEEECCCC
Confidence 22 222222 4788876543
|
| >3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A* | Back alignment and structure |
|---|
Probab=96.28 E-value=0.019 Score=53.45 Aligned_cols=71 Identities=11% Similarity=0.115 Sum_probs=55.5
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEc
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~ 170 (306)
.++++|+|.|+ |.+|+.+++.+.+.|++|+++..++........ -..+..|+.|.+.+.++.+.+|+|..-
T Consensus 12 ~~~k~IlIlG~-G~~g~~la~aa~~~G~~vi~~d~~~~~~~~~~a--d~~~~~~~~d~~~l~~~~~~~dvI~~~ 82 (389)
T 3q2o_A 12 LPGKTIGIIGG-GQLGRMMALAAKEMGYKIAVLDPTKNSPCAQVA--DIEIVASYDDLKAIQHLAEISDVVTYE 82 (389)
T ss_dssp CTTSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSTTCTTTTTC--SEEEECCTTCHHHHHHHHHTCSEEEES
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCCCCchHHhC--CceEecCcCCHHHHHHHHHhCCEeeec
Confidence 35789999998 889999999999999999999776533211111 235668899999999999999988653
|
| >2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A | Back alignment and structure |
|---|
Probab=96.27 E-value=0.01 Score=54.33 Aligned_cols=67 Identities=12% Similarity=-0.048 Sum_probs=49.9
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcC
Q 021854 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS 171 (306)
Q Consensus 96 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~ 171 (306)
...+++|.|.|. |.||+.+++.|...|++|++..|+.++.......++.. . ++.++++++|+|+.+.
T Consensus 152 ~l~g~~vgIIG~-G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~-----~---~l~e~l~~aDvVi~~v 218 (330)
T 2gcg_A 152 GLTQSTVGIIGL-GRIGQAIARRLKPFGVQRFLYTGRQPRPEEAAEFQAEF-----V---STPELAAQSDFIVVAC 218 (330)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHGGGTCCEEEEESSSCCHHHHHTTTCEE-----C---CHHHHHHHCSEEEECC
T ss_pred CCCCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCCcchhHHHhcCcee-----C---CHHHHHhhCCEEEEeC
Confidence 456799999998 99999999999999999999998876533222222322 1 3456778899999773
|
| >4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=96.27 E-value=0.011 Score=55.64 Aligned_cols=72 Identities=10% Similarity=0.012 Sum_probs=53.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeecc----------------CCC------HH
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGD----------------ASN------KK 155 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D----------------~~d------~~ 155 (306)
.+.+|+|+|+ |.+|...++.+...|++|+++.+++.+......-+.+++..+ +++ .+
T Consensus 189 ~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~~~ 267 (405)
T 4dio_A 189 PAAKIFVMGA-GVAGLQAIATARRLGAVVSATDVRPAAKEQVASLGAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQAA 267 (405)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSTTHHHHHHHTTCEECCCCC-----------------CHHHHHHHH
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCceeecccccccccccccchhhhcchhhhhhhHh
Confidence 4679999999 999999999999999999999999876432211123333322 122 35
Q ss_pred HHHHHhcCccEEEEc
Q 021854 156 FLKTALRGVRSIICP 170 (306)
Q Consensus 156 ~l~~~~~~~d~vi~~ 170 (306)
.+.++++++|+||.+
T Consensus 268 ~l~e~l~~aDVVI~t 282 (405)
T 4dio_A 268 LVAEHIAKQDIVITT 282 (405)
T ss_dssp HHHHHHHTCSEEEEC
T ss_pred HHHHHhcCCCEEEEC
Confidence 788899999999976
|
| >1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=96.26 E-value=0.014 Score=53.59 Aligned_cols=91 Identities=13% Similarity=0.077 Sum_probs=59.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhh--hcCCCceeeeccCCC----HHHHHHHh-----cCccE
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME--SFGTYVESMAGDASN----KKFLKTAL-----RGVRS 166 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~--~~~~~v~~v~~D~~d----~~~l~~~~-----~~~d~ 166 (306)
.+++|||+|| |.+|...++.+...|++|+++.+++++.+. .++ ... ..|..+ .+.+.+.. .++|+
T Consensus 168 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lG--a~~-~~~~~~~~~~~~~i~~~~~~~~g~g~D~ 243 (352)
T 1e3j_A 168 LGTTVLVIGA-GPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKNCG--ADV-TLVVDPAKEEESSIIERIRSAIGDLPNV 243 (352)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT--CSE-EEECCTTTSCHHHHHHHHHHHSSSCCSE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhC--CCE-EEcCcccccHHHHHHHHhccccCCCCCE
Confidence 5789999997 999999998888899999999888876432 233 221 223332 34555554 36999
Q ss_pred EEEcCCch--hhhcccc-cCCCEEEEecC
Q 021854 167 IICPSEGF--ISNAGSL-KGVQHVILLSQ 192 (306)
Q Consensus 167 vi~~~~g~--~~~~a~~-~gvkr~V~iSS 192 (306)
||.+.++. +..+... ..-.++|.++.
T Consensus 244 vid~~g~~~~~~~~~~~l~~~G~iv~~G~ 272 (352)
T 1e3j_A 244 TIDCSGNEKCITIGINITRTGGTLMLVGM 272 (352)
T ss_dssp EEECSCCHHHHHHHHHHSCTTCEEEECSC
T ss_pred EEECCCCHHHHHHHHHHHhcCCEEEEEec
Confidence 99885542 2222111 22358888865
|
| >3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A | Back alignment and structure |
|---|
Probab=96.25 E-value=0.018 Score=52.52 Aligned_cols=67 Identities=18% Similarity=0.129 Sum_probs=52.6
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcCC
Q 021854 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE 172 (306)
Q Consensus 96 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~ 172 (306)
...+++|.|.|. |.||+.+++.|...|++|++..|+++... .+... ....+++++++.+|+|+++.+
T Consensus 136 ~l~g~tvGIiG~-G~IG~~vA~~l~~~G~~V~~~dr~~~~~~-----~~~~~----~~~~~l~ell~~aDiV~l~~P 202 (315)
T 3pp8_A 136 TREEFSVGIMGA-GVLGAKVAESLQAWGFPLRCWSRSRKSWP-----GVESY----VGREELRAFLNQTRVLINLLP 202 (315)
T ss_dssp CSTTCCEEEECC-SHHHHHHHHHHHTTTCCEEEEESSCCCCT-----TCEEE----ESHHHHHHHHHTCSEEEECCC
T ss_pred CcCCCEEEEEee-CHHHHHHHHHHHHCCCEEEEEcCCchhhh-----hhhhh----cccCCHHHHHhhCCEEEEecC
Confidence 456899999998 99999999999999999999999875432 22221 123688899999999997733
|
| >2yv3_A Aspartate-semialdehyde dehydrogenase; aspartate pathway, structural genomics; 2.70A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=96.25 E-value=0.0035 Score=57.60 Aligned_cols=87 Identities=16% Similarity=0.080 Sum_probs=49.4
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEec--CcchhhhhcC-CCceeeeccCCCHHHHHHHhcCccEEEEcCCch--
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVK--DKRNAMESFG-TYVESMAGDASNKKFLKTALRGVRSIICPSEGF-- 174 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R--~~~~~~~~~~-~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~g~-- 174 (306)
++|.|.||+|.+|+.+++.|.++++.+..+.. +.+.....+. .+..+...+. +++ . + ++|+||.+.+.+
T Consensus 1 mkVaI~GAtG~iG~~llr~L~~~~~~~~~l~~~~s~~~~g~~l~~~g~~i~v~~~-~~~---~-~-~~DvV~~a~g~~~s 74 (331)
T 2yv3_A 1 MRVAVVGATGAVGREILKVLEARNFPLSELRLYASPRSAGVRLAFRGEEIPVEPL-PEG---P-L-PVDLVLASAGGGIS 74 (331)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCCCSCCEEEECGGGSSCEEEETTEEEEEEEC-CSS---C-C-CCSEEEECSHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEeeccccCCCEEEEcCceEEEEeC-Chh---h-c-CCCEEEECCCccch
Confidence 47999999999999999999977765443321 1111000010 0112222222 222 1 4 899999986644
Q ss_pred --hhhcccccCCCEEEEecCc
Q 021854 175 --ISNAGSLKGVQHVILLSQL 193 (306)
Q Consensus 175 --~~~~a~~~gvkr~V~iSS~ 193 (306)
......+.|+ ++|-.|+.
T Consensus 75 ~~~a~~~~~~G~-~vId~s~~ 94 (331)
T 2yv3_A 75 RAKALVWAEGGA-LVVDNSSA 94 (331)
T ss_dssp HHHHHHHHHTTC-EEEECSSS
T ss_pred HHHHHHHHHCCC-EEEECCCc
Confidence 2233345676 57777775
|
| >2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1} | Back alignment and structure |
|---|
Probab=96.21 E-value=0.0078 Score=51.29 Aligned_cols=52 Identities=8% Similarity=-0.010 Sum_probs=41.0
Q ss_pred CccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcCC
Q 021854 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE 172 (306)
Q Consensus 95 ~~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~ 172 (306)
.....++|.|.|+ |.+|..++..|++.|++|++..|+++ .++++|+||.+.+
T Consensus 15 ~~~~~~~I~iiG~-G~mG~~la~~l~~~g~~V~~~~~~~~-------------------------~~~~aD~vi~av~ 66 (209)
T 2raf_A 15 LYFQGMEITIFGK-GNMGQAIGHNFEIAGHEVTYYGSKDQ-------------------------ATTLGEIVIMAVP 66 (209)
T ss_dssp -----CEEEEECC-SHHHHHHHHHHHHTTCEEEEECTTCC-------------------------CSSCCSEEEECSC
T ss_pred cccCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHH-------------------------HhccCCEEEEcCC
Confidence 3455789999995 99999999999999999999988764 4567899988754
|
| >3uw3_A Aspartate-semialdehyde dehydrogenase; structural genomics, seattle structural genomics center for infectious disease (ssgcid); 1.55A {Burkholderia thailandensis} | Back alignment and structure |
|---|
Probab=96.21 E-value=0.015 Score=54.38 Aligned_cols=89 Identities=15% Similarity=0.013 Sum_probs=52.7
Q ss_pred CCeEEEEcCCChHHHHHHH-HHHHCC---CeEEEEe-cCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcCCc
Q 021854 99 RDAVLVTDGDSDIGQMVIL-SLIVKR---TRIKALV-KDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG 173 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~-~L~~~g---~~V~~l~-R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~g 173 (306)
.++|.|.||||++|+++++ .|.++. .+++.++ |+..+....+... ....-+..+.+. ++++|+||.+.+.
T Consensus 4 ~~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss~~aG~~~~~~~~~-~~~v~~~~~~~~----~~~vDvvf~a~~~ 78 (377)
T 3uw3_A 4 SMNVGLVGWRGMVGSVLMQRMQEEGDFDLIEPVFFSTSNAGGKAPSFAKN-ETTLKDATSIDD----LKKCDVIITCQGG 78 (377)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSCTTSBCCTTCCS-CCBCEETTCHHH----HHTCSEEEECSCH
T ss_pred CCEEEEECCCCHHHHHHHHHHHhhCCCCceEEEEEechhcCCCHHHcCCC-ceEEEeCCChhH----hcCCCEEEECCCh
Confidence 5799999999999999999 665555 3555554 3221211112211 222234444433 5789999998775
Q ss_pred hh----hhcccccCCC-EEEEecC
Q 021854 174 FI----SNAGSLKGVQ-HVILLSQ 192 (306)
Q Consensus 174 ~~----~~~a~~~gvk-r~V~iSS 192 (306)
.. .....++|++ ++|=.|+
T Consensus 79 ~~s~~~~~~~~~~G~k~~VID~ss 102 (377)
T 3uw3_A 79 DYTNDVFPKLRAAGWNGYWIDAAS 102 (377)
T ss_dssp HHHHHHHHHHHHTTCCSEEEECSS
T ss_pred HHHHHHHHHHHHCCCCEEEEeCCc
Confidence 42 2334567875 5555555
|
| >2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=96.19 E-value=0.0048 Score=59.24 Aligned_cols=90 Identities=13% Similarity=0.129 Sum_probs=60.1
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCC-C---eEEEEecCcch--hhhhcCCCceeeeccCCCHHH-HHHHhcCccEEEEcC
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKR-T---RIKALVKDKRN--AMESFGTYVESMAGDASNKKF-LKTALRGVRSIICPS 171 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g-~---~V~~l~R~~~~--~~~~~~~~v~~v~~D~~d~~~-l~~~~~~~d~vi~~~ 171 (306)
.++|+|.|+ |+||+.+++.|++.. + +|++...+... +.+..+..+..+..|-.|.+. +.+++++.|+||+++
T Consensus 13 ~~rVlIIGa-GgVG~~va~lla~~~dv~~~~I~vaD~~~~~~~~~~~~g~~~~~~~Vdadnv~~~l~aLl~~~DvVIN~s 91 (480)
T 2ph5_A 13 KNRFVILGF-GCVGQALMPLIFEKFDIKPSQVTIIAAEGTKVDVAQQYGVSFKLQQITPQNYLEVIGSTLEENDFLIDVS 91 (480)
T ss_dssp CSCEEEECC-SHHHHHHHHHHHHHBCCCGGGEEEEESSCCSCCHHHHHTCEEEECCCCTTTHHHHTGGGCCTTCEEEECC
T ss_pred CCCEEEECc-CHHHHHHHHHHHhCCCCceeEEEEeccchhhhhHHhhcCCceeEEeccchhHHHHHHHHhcCCCEEEECC
Confidence 578999996 999999999999864 4 68887765543 222233233333444455544 566787779999875
Q ss_pred Cch----hhhcccccCCCEEEEe
Q 021854 172 EGF----ISNAGSLKGVQHVILL 190 (306)
Q Consensus 172 ~g~----~~~~a~~~gvkr~V~i 190 (306)
..+ ++++|.++|+ ++|=+
T Consensus 92 ~~~~~l~Im~acleaGv-~YlDT 113 (480)
T 2ph5_A 92 IGISSLALIILCNQKGA-LYINA 113 (480)
T ss_dssp SSSCHHHHHHHHHHHTC-EEEES
T ss_pred ccccCHHHHHHHHHcCC-CEEEC
Confidence 432 6788888887 34433
|
| >1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A* | Back alignment and structure |
|---|
Probab=96.18 E-value=0.024 Score=51.35 Aligned_cols=67 Identities=16% Similarity=0.128 Sum_probs=46.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEecCcchhhhh----c------CCCceeeeccCCCHHHHHHHhcCccE
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMES----F------GTYVESMAGDASNKKFLKTALRGVRS 166 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~l~R~~~~~~~~----~------~~~v~~v~~D~~d~~~l~~~~~~~d~ 166 (306)
|+++|.|+|| |.+|..++..|+..|+ +|+++.+++++++.. . ....++... .| . ++++++|+
T Consensus 1 M~~kI~VIGa-G~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t--~d---~-~a~~~aD~ 73 (309)
T 1ur5_A 1 MRKKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGT--NN---Y-ADTANSDV 73 (309)
T ss_dssp -CCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEE--SC---G-GGGTTCSE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEEC--CC---H-HHHCCCCE
Confidence 3579999999 9999999999999996 988888777653221 0 112222211 22 2 45899999
Q ss_pred EEEcC
Q 021854 167 IICPS 171 (306)
Q Consensus 167 vi~~~ 171 (306)
||.++
T Consensus 74 Vi~a~ 78 (309)
T 1ur5_A 74 IVVTS 78 (309)
T ss_dssp EEECC
T ss_pred EEEcC
Confidence 99883
|
| >3pzr_A Aspartate-semialdehyde dehydrogenase; NADP, oxidoreductase-oxidoreductase inhibitor complex; HET: NAP; 1.75A {Vibrio cholerae} PDB: 1mc4_A 1mb4_A* 3q0e_A | Back alignment and structure |
|---|
Probab=96.18 E-value=0.016 Score=54.08 Aligned_cols=88 Identities=15% Similarity=0.065 Sum_probs=51.3
Q ss_pred CeEEEEcCCChHHHHHHH-HHHHCC---CeEEEEe-cCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcCCch
Q 021854 100 DAVLVTDGDSDIGQMVIL-SLIVKR---TRIKALV-KDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEGF 174 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~-~L~~~g---~~V~~l~-R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~g~ 174 (306)
++|.|.||||++|+++++ .|..+. .++..++ |+..+....+... +...-+..+.+. ++++|+||.+.+..
T Consensus 1 ~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss~~aG~~~~~~~~~-~~~~~~~~~~~~----~~~~Dvvf~a~~~~ 75 (370)
T 3pzr_A 1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQIGVPAPNFGKD-AGMLHDAFDIES----LKQLDAVITCQGGS 75 (370)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTSBCCCSSSC-CCBCEETTCHHH----HTTCSEEEECSCHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCCCCceEEEEEeccccCcCHHHhCCC-ceEEEecCChhH----hccCCEEEECCChH
Confidence 579999999999999999 665555 3555553 3321211112211 222234434333 58999999987754
Q ss_pred h----hhcccccCCC-EEEEecC
Q 021854 175 I----SNAGSLKGVQ-HVILLSQ 192 (306)
Q Consensus 175 ~----~~~a~~~gvk-r~V~iSS 192 (306)
. .....++|.+ ++|=.|+
T Consensus 76 ~s~~~~~~~~~~G~k~~VID~ss 98 (370)
T 3pzr_A 76 YTEKVYPALRQAGWKGYWIDAAS 98 (370)
T ss_dssp HHHHHHHHHHHTTCCCEEEECSS
T ss_pred HHHHHHHHHHHCCCCEEEEeCCc
Confidence 3 2234456775 5555555
|
| >4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=96.16 E-value=0.0061 Score=55.45 Aligned_cols=66 Identities=8% Similarity=-0.108 Sum_probs=47.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCC-CeEEEEecCcc-------hhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEE
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKR-------NAMESFGTYVESMAGDASNKKFLKTALRGVRSIIC 169 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~l~R~~~-------~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~ 169 (306)
|.++|.|.|+ |.+|..+++.|++.| ++|++..|+++ ........++ .. . +..++++++|+||.
T Consensus 23 M~m~IgvIG~-G~mG~~lA~~L~~~G~~~V~~~dr~~~~~~~~~~~~~~~~~~g~---~~-~----s~~e~~~~aDvVi~ 93 (317)
T 4ezb_A 23 MMTTIAFIGF-GEAAQSIAGGLGGRNAARLAAYDLRFNDPAASGALRARAAELGV---EP-L----DDVAGIACADVVLS 93 (317)
T ss_dssp SCCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECGGGGCTTTHHHHHHHHHHTTC---EE-E----SSGGGGGGCSEEEE
T ss_pred cCCeEEEECc-cHHHHHHHHHHHHcCCCeEEEEeCCCccccchHHHHHHHHHCCC---CC-C----CHHHHHhcCCEEEE
Confidence 5689999996 999999999999999 99999999873 2221111222 11 0 23456778999998
Q ss_pred cCC
Q 021854 170 PSE 172 (306)
Q Consensus 170 ~~~ 172 (306)
+.+
T Consensus 94 avp 96 (317)
T 4ezb_A 94 LVV 96 (317)
T ss_dssp CCC
T ss_pred ecC
Confidence 844
|
| >3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579} | Back alignment and structure |
|---|
Probab=96.15 E-value=0.0044 Score=54.09 Aligned_cols=66 Identities=11% Similarity=0.093 Sum_probs=48.6
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCC----eEEEEecCcchhhhhcC-CCceeeeccCCCHHHHHHHhcCccEEEEcCC
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKRT----RIKALVKDKRNAMESFG-TYVESMAGDASNKKFLKTALRGVRSIICPSE 172 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g~----~V~~l~R~~~~~~~~~~-~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~ 172 (306)
.++|.|.|+ |.+|..+++.|++.|+ +|.+..|++++...... .++.. ..+ ..++++++|+||.+..
T Consensus 2 ~~~i~iIG~-G~mG~~~a~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~g~~~----~~~---~~e~~~~aDvVilav~ 72 (247)
T 3gt0_A 2 DKQIGFIGC-GNMGMAMIGGMINKNIVSSNQIICSDLNTANLKNASEKYGLTT----TTD---NNEVAKNADILILSIK 72 (247)
T ss_dssp CCCEEEECC-SHHHHHHHHHHHHTTSSCGGGEEEECSCHHHHHHHHHHHCCEE----CSC---HHHHHHHCSEEEECSC
T ss_pred CCeEEEECc-cHHHHHHHHHHHhCCCCCCCeEEEEeCCHHHHHHHHHHhCCEE----eCC---hHHHHHhCCEEEEEeC
Confidence 578999996 9999999999999998 99999999887543321 12221 123 3445667999998843
|
| >3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=96.15 E-value=0.0037 Score=56.69 Aligned_cols=90 Identities=17% Similarity=0.255 Sum_probs=60.0
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcch-hhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcCCchh
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-AMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEGFI 175 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~-~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~g~~ 175 (306)
.++++|+|+||+|.+|...++.+...|++|++++++.+. ....++ ... ..|..+.+.+.+.++++|++|.+.++..
T Consensus 151 ~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~~~~~~~~~lG--a~~-~i~~~~~~~~~~~~~g~D~v~d~~g~~~ 227 (321)
T 3tqh_A 151 KQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTASKRNHAFLKALG--AEQ-CINYHEEDFLLAISTPVDAVIDLVGGDV 227 (321)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHT--CSE-EEETTTSCHHHHCCSCEEEEEESSCHHH
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEeccchHHHHHHcC--CCE-EEeCCCcchhhhhccCCCEEEECCCcHH
Confidence 357899999999999999999888899999988754432 112233 222 2355554436667789999998866432
Q ss_pred h----hcccccCCCEEEEec
Q 021854 176 S----NAGSLKGVQHVILLS 191 (306)
Q Consensus 176 ~----~~a~~~gvkr~V~iS 191 (306)
. +..... .++|.++
T Consensus 228 ~~~~~~~l~~~--G~iv~~g 245 (321)
T 3tqh_A 228 GIQSIDCLKET--GCIVSVP 245 (321)
T ss_dssp HHHHGGGEEEE--EEEEECC
T ss_pred HHHHHHhccCC--CEEEEeC
Confidence 2 222222 4677764
|
| >4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens} | Back alignment and structure |
|---|
Probab=96.13 E-value=0.015 Score=53.83 Aligned_cols=69 Identities=7% Similarity=-0.099 Sum_probs=49.3
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcCC
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE 172 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~ 172 (306)
+++|.|.|. |.+|..+++.|++.|++|++..|++++.......++.. ..+.+.+.+..+..|+||.+.+
T Consensus 22 ~mkIgiIGl-G~mG~~~A~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~----~~s~~e~~~~a~~~DvVi~~vp 90 (358)
T 4e21_A 22 SMQIGMIGL-GRMGADMVRRLRKGGHECVVYDLNVNAVQALEREGIAG----ARSIEEFCAKLVKPRVVWLMVP 90 (358)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCBC----CSSHHHHHHHSCSSCEEEECSC
T ss_pred CCEEEEECc-hHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCCCEE----eCCHHHHHhcCCCCCEEEEeCC
Confidence 589999986 99999999999999999999999998765544333321 2333333332333499998733
|
| >2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A | Back alignment and structure |
|---|
Probab=96.12 E-value=0.0045 Score=54.22 Aligned_cols=67 Identities=9% Similarity=-0.015 Sum_probs=48.8
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCC-CceeeeccCCCHHHHHHHhcCccEEEEcCCc
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGT-YVESMAGDASNKKFLKTALRGVRSIICPSEG 173 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~-~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~g 173 (306)
+++|.|.|+ |.+|..+++.|.+.|++|.+..|++++....... ++.. ..+ +.++++++|+||.+.+.
T Consensus 3 ~m~i~iiG~-G~mG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~g~~~----~~~---~~~~~~~~D~Vi~~v~~ 70 (259)
T 2ahr_A 3 AMKIGIIGV-GKMASAIIKGLKQTPHELIISGSSLERSKEIAEQLALPY----AMS---HQDLIDQVDLVILGIKP 70 (259)
T ss_dssp CCEEEEECC-SHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHHTCCB----CSS---HHHHHHTCSEEEECSCG
T ss_pred ccEEEEECC-CHHHHHHHHHHHhCCCeEEEECCCHHHHHHHHHHcCCEe----eCC---HHHHHhcCCEEEEEeCc
Confidence 478999996 9999999999999999999999988765432211 2221 223 44566789999988553
|
| >3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021} | Back alignment and structure |
|---|
Probab=96.10 E-value=0.0073 Score=55.75 Aligned_cols=93 Identities=11% Similarity=0.092 Sum_probs=59.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhh--hcCCCceeeeccCCC-HHHHHHHhc--CccEEEEcCC
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME--SFGTYVESMAGDASN-KKFLKTALR--GVRSIICPSE 172 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~--~~~~~v~~v~~D~~d-~~~l~~~~~--~~d~vi~~~~ 172 (306)
.+++|||+| +|.+|...++.+...|++|+++.+++++.+. .++.. .++..+-.+ .+.+.+... ++|+||.+.+
T Consensus 189 ~g~~VlV~G-~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~-~vi~~~~~~~~~~v~~~~~g~g~D~vid~~g 266 (363)
T 3uog_A 189 AGDRVVVQG-TGGVALFGLQIAKATGAEVIVTSSSREKLDRAFALGAD-HGINRLEEDWVERVYALTGDRGADHILEIAG 266 (363)
T ss_dssp TTCEEEEES-SBHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTCS-EEEETTTSCHHHHHHHHHTTCCEEEEEEETT
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEecCchhHHHHHHcCCC-EEEcCCcccHHHHHHHHhCCCCceEEEECCC
Confidence 578999999 7999999998888899999999998876432 23321 122211122 234555554 6899998754
Q ss_pred chh----hhcccccCCCEEEEecCcc
Q 021854 173 GFI----SNAGSLKGVQHVILLSQLS 194 (306)
Q Consensus 173 g~~----~~~a~~~gvkr~V~iSS~~ 194 (306)
+.. .+.++.. .++|.++...
T Consensus 267 ~~~~~~~~~~l~~~--G~iv~~G~~~ 290 (363)
T 3uog_A 267 GAGLGQSLKAVAPD--GRISVIGVLE 290 (363)
T ss_dssp SSCHHHHHHHEEEE--EEEEEECCCS
T ss_pred hHHHHHHHHHhhcC--CEEEEEecCC
Confidence 332 2223333 4788887654
|
| >2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.09 E-value=0.0097 Score=53.70 Aligned_cols=66 Identities=3% Similarity=-0.068 Sum_probs=49.0
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcCC
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE 172 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~ 172 (306)
.++|.|.|+ |.+|..+++.|++.|++|.+..|++++.......++.. ..+ ..++++++|+||.+.+
T Consensus 30 ~~~I~iIG~-G~mG~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~----~~~---~~~~~~~~DvVi~av~ 95 (316)
T 2uyy_A 30 DKKIGFLGL-GLMGSGIVSNLLKMGHTVTVWNRTAEKCDLFIQEGARL----GRT---PAEVVSTCDITFACVS 95 (316)
T ss_dssp SSCEEEECC-SHHHHHHHHHHHHTTCCEEEECSSGGGGHHHHHTTCEE----CSC---HHHHHHHCSEEEECCS
T ss_pred CCeEEEEcc-cHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHcCCEE----cCC---HHHHHhcCCEEEEeCC
Confidence 478999997 99999999999999999999999887754332222321 122 3455678899998855
|
| >3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=96.09 E-value=0.011 Score=52.83 Aligned_cols=66 Identities=9% Similarity=0.074 Sum_probs=50.2
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCC---eEEEEecCcchhhhhcCC-CceeeeccCCCHHHHHHHhcCccEEEEcCC
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKRT---RIKALVKDKRNAMESFGT-YVESMAGDASNKKFLKTALRGVRSIICPSE 172 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g~---~V~~l~R~~~~~~~~~~~-~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~ 172 (306)
.++|.|.|+ |.+|..+++.|++.|+ +|++..|++++....... ++.+. . +..++++++|+||.+.+
T Consensus 3 ~~~I~iIG~-G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~gi~~~----~---~~~~~~~~aDvVilav~ 72 (280)
T 3tri_A 3 TSNITFIGG-GNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKCGVHTT----Q---DNRQGALNADVVVLAVK 72 (280)
T ss_dssp CSCEEEESC-SHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTTCCEEE----S---CHHHHHSSCSEEEECSC
T ss_pred CCEEEEEcc-cHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHcCCEEe----C---ChHHHHhcCCeEEEEeC
Confidence 578999999 9999999999999998 999999999875543221 33321 1 23456789999998844
|
| >3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A | Back alignment and structure |
|---|
Probab=96.08 E-value=0.014 Score=54.04 Aligned_cols=90 Identities=12% Similarity=0.083 Sum_probs=61.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEecCcc-------------------h-------hhhhcC-CCceeeec
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKR-------------------N-------AMESFG-TYVESMAG 149 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~l~R~~~-------------------~-------~~~~~~-~~v~~v~~ 149 (306)
...+|+|.|+ |++|++++..|+..|. +++++.++.- | +.+..+ ..++.+..
T Consensus 117 ~~~~VlvvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~~~ 195 (353)
T 3h5n_A 117 KNAKVVILGC-GGIGNHVSVILATSGIGEIILIDNDQIENTNLTRQVLFSEDDVGKNKTEVIKRELLKRNSEISVSEIAL 195 (353)
T ss_dssp HTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEEEC
T ss_pred hCCeEEEECC-CHHHHHHHHHHHhCCCCeEEEECCCcCcccccccccCCChHHCCChHHHHHHHHHHHHCCCCeEEEeec
Confidence 4789999999 8899999999999996 7777776541 1 011112 24556666
Q ss_pred cCCCHHHHHHHhcCccEEEEcCCch------hhhcccccCCCEEEEe
Q 021854 150 DASNKKFLKTALRGVRSIICPSEGF------ISNAGSLKGVQHVILL 190 (306)
Q Consensus 150 D~~d~~~l~~~~~~~d~vi~~~~g~------~~~~a~~~gvkr~V~i 190 (306)
++.+...+.. ++++|+||.++..+ +.++|.+.+++ +|..
T Consensus 196 ~i~~~~~~~~-~~~~DlVvd~~Dn~~~~r~~ln~~c~~~~~p-~i~~ 240 (353)
T 3h5n_A 196 NINDYTDLHK-VPEADIWVVSADHPFNLINWVNKYCVRANQP-YINA 240 (353)
T ss_dssp CCCSGGGGGG-SCCCSEEEECCCCSTTHHHHHHHHHHHTTCC-EEEE
T ss_pred ccCchhhhhH-hccCCEEEEecCChHHHHHHHHHHHHHhCCC-EEEE
Confidence 6766554666 89999999873322 33567777776 4443
|
| >3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium} | Back alignment and structure |
|---|
Probab=96.08 E-value=0.013 Score=50.82 Aligned_cols=74 Identities=15% Similarity=0.115 Sum_probs=55.5
Q ss_pred CCccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcch-hhhhc-CCCceeeeccCCCHHHHHHHhcCccEEEEcC
Q 021854 94 FPEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-AMESF-GTYVESMAGDASNKKFLKTALRGVRSIICPS 171 (306)
Q Consensus 94 ~~~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~-~~~~~-~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~ 171 (306)
..+..+++|||.|| |.+|...++.|++.|++|+++..+... +.... ..+++++..++.+ ..+.++|.||.++
T Consensus 26 fl~L~gk~VLVVGg-G~va~~ka~~Ll~~GA~VtVvap~~~~~l~~l~~~~~i~~i~~~~~~-----~dL~~adLVIaAT 99 (223)
T 3dfz_A 26 MLDLKGRSVLVVGG-GTIATRRIKGFLQEGAAITVVAPTVSAEINEWEAKGQLRVKRKKVGE-----EDLLNVFFIVVAT 99 (223)
T ss_dssp EECCTTCCEEEECC-SHHHHHHHHHHGGGCCCEEEECSSCCHHHHHHHHTTSCEEECSCCCG-----GGSSSCSEEEECC
T ss_pred EEEcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHcCCcEEEECCCCH-----hHhCCCCEEEECC
Confidence 34567899999998 999999999999999999999877653 22222 2357777776653 2367899999875
Q ss_pred Cc
Q 021854 172 EG 173 (306)
Q Consensus 172 ~g 173 (306)
+.
T Consensus 100 ~d 101 (223)
T 3dfz_A 100 ND 101 (223)
T ss_dssp CC
T ss_pred CC
Confidence 43
|
| >3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A | Back alignment and structure |
|---|
Probab=96.08 E-value=0.0085 Score=55.49 Aligned_cols=69 Identities=10% Similarity=-0.000 Sum_probs=51.0
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcCC
Q 021854 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE 172 (306)
Q Consensus 96 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~ 172 (306)
...+++|.|.|. |.||+.+++.|...|++|++..|+..........+++.+ ++++++++.+|+|+++.+
T Consensus 161 ~l~gktvGIIG~-G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~-------~~l~ell~~aDvV~l~~P 229 (351)
T 3jtm_A 161 DLEGKTIGTVGA-GRIGKLLLQRLKPFGCNLLYHDRLQMAPELEKETGAKFV-------EDLNEMLPKCDVIVINMP 229 (351)
T ss_dssp CSTTCEEEEECC-SHHHHHHHHHHGGGCCEEEEECSSCCCHHHHHHHCCEEC-------SCHHHHGGGCSEEEECSC
T ss_pred cccCCEEeEEEe-CHHHHHHHHHHHHCCCEEEEeCCCccCHHHHHhCCCeEc-------CCHHHHHhcCCEEEECCC
Confidence 456899999998 999999999999999999999987643221111122221 356788999999997633
|
| >1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A* | Back alignment and structure |
|---|
Probab=96.06 E-value=0.018 Score=52.75 Aligned_cols=68 Identities=18% Similarity=0.131 Sum_probs=48.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEecCcchhhhh----------cCCCceeeeccCCCHHHHHHHhcCccE
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMES----------FGTYVESMAGDASNKKFLKTALRGVRS 166 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~l~R~~~~~~~~----------~~~~v~~v~~D~~d~~~l~~~~~~~d~ 166 (306)
+.++|.|+|| |.+|..++..|+..|+ +|+++.+++++++.. ......+... +| ++++++++|+
T Consensus 8 ~~~kI~VIGa-G~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t--~d---~~ea~~~aDi 81 (331)
T 1pzg_A 8 RRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAE--YS---YEAALTGADC 81 (331)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEE--CS---HHHHHTTCSE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHhhhhccCCCCEEEEe--CC---HHHHhCCCCE
Confidence 3579999999 9999999999999998 999999988764321 1111111110 23 4457899999
Q ss_pred EEEcC
Q 021854 167 IICPS 171 (306)
Q Consensus 167 vi~~~ 171 (306)
||.+.
T Consensus 82 Vi~a~ 86 (331)
T 1pzg_A 82 VIVTA 86 (331)
T ss_dssp EEECC
T ss_pred EEEcc
Confidence 99873
|
| >1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=96.06 E-value=0.009 Score=54.16 Aligned_cols=90 Identities=13% Similarity=0.090 Sum_probs=54.6
Q ss_pred eEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhh--hcCCCceeeeccCCCH--HHHHHHh-cCccEEEEcCCchh
Q 021854 101 AVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME--SFGTYVESMAGDASNK--KFLKTAL-RGVRSIICPSEGFI 175 (306)
Q Consensus 101 ~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~--~~~~~v~~v~~D~~d~--~~l~~~~-~~~d~vi~~~~g~~ 175 (306)
+|+|+||+|.+|...++.+...|++|+++++++++.+. .++ ...+ .|..+. +.+.... .++|++|.+.++..
T Consensus 152 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~lG--a~~~-i~~~~~~~~~~~~~~~~~~d~vid~~g~~~ 228 (328)
T 1xa0_A 152 PVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRVLG--AKEV-LAREDVMAERIRPLDKQRWAAAVDPVGGRT 228 (328)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHHTT--CSEE-EECC---------CCSCCEEEEEECSTTTT
T ss_pred eEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcC--CcEE-EecCCcHHHHHHHhcCCcccEEEECCcHHH
Confidence 89999999999999998888899999999998766332 233 2222 344443 1222221 36899998855432
Q ss_pred h-hcccc-cCCCEEEEecCc
Q 021854 176 S-NAGSL-KGVQHVILLSQL 193 (306)
Q Consensus 176 ~-~~a~~-~gvkr~V~iSS~ 193 (306)
. .+.+. ..-.++|.++..
T Consensus 229 ~~~~~~~l~~~G~~v~~G~~ 248 (328)
T 1xa0_A 229 LATVLSRMRYGGAVAVSGLT 248 (328)
T ss_dssp HHHHHHTEEEEEEEEECSCC
T ss_pred HHHHHHhhccCCEEEEEeec
Confidence 2 22111 122478887654
|
| >4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=96.05 E-value=0.015 Score=53.62 Aligned_cols=68 Identities=7% Similarity=-0.103 Sum_probs=51.6
Q ss_pred CccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcCC
Q 021854 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE 172 (306)
Q Consensus 95 ~~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~ 172 (306)
.+..+++|.|.|. |.||+.+++.|...|++|++..|+..+..... +++.+ ++++++++.+|+|+++.+
T Consensus 169 ~~l~gktvGIIGl-G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~--g~~~~-------~~l~ell~~sDvV~l~~P 236 (345)
T 4g2n_A 169 MGLTGRRLGIFGM-GRIGRAIATRARGFGLAIHYHNRTRLSHALEE--GAIYH-------DTLDSLLGASDIFLIAAP 236 (345)
T ss_dssp CCCTTCEEEEESC-SHHHHHHHHHHHTTTCEEEEECSSCCCHHHHT--TCEEC-------SSHHHHHHTCSEEEECSC
T ss_pred cccCCCEEEEEEe-ChhHHHHHHHHHHCCCEEEEECCCCcchhhhc--CCeEe-------CCHHHHHhhCCEEEEecC
Confidence 3456899999997 99999999999999999999998864432211 22221 356788999999997733
|
| >4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=96.05 E-value=0.0066 Score=52.10 Aligned_cols=67 Identities=6% Similarity=-0.063 Sum_probs=47.8
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEE-EecCcchhhhhcCC-CceeeeccCCCHHHHHHHhcCccEEEEcCCc
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKA-LVKDKRNAMESFGT-YVESMAGDASNKKFLKTALRGVRSIICPSEG 173 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~-l~R~~~~~~~~~~~-~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~g 173 (306)
+++|.|.|+ |.+|..+++.|++.|++|++ ..|++++....... ++.... .+. +.++++|+||.+.+.
T Consensus 23 mmkI~IIG~-G~mG~~la~~l~~~g~~V~~v~~r~~~~~~~l~~~~g~~~~~---~~~----~~~~~aDvVilavp~ 91 (220)
T 4huj_A 23 MTTYAIIGA-GAIGSALAERFTAAQIPAIIANSRGPASLSSVTDRFGASVKA---VEL----KDALQADVVILAVPY 91 (220)
T ss_dssp SCCEEEEEC-HHHHHHHHHHHHHTTCCEEEECTTCGGGGHHHHHHHTTTEEE---CCH----HHHTTSSEEEEESCG
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCCHHHHHHHHHHhCCCccc---ChH----HHHhcCCEEEEeCCh
Confidence 579999995 99999999999999999999 88888775432110 122211 222 336789999988543
|
| >3hsk_A Aspartate-semialdehyde dehydrogenase; candida albicans NADP complex, amino-acid biosynthesis; HET: NAP; 2.20A {Candida albicans} | Back alignment and structure |
|---|
Probab=96.02 E-value=0.013 Score=54.73 Aligned_cols=92 Identities=12% Similarity=0.062 Sum_probs=52.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCC-CeEEEEe--c-Ccch-hhhhcCC--------C-ceeeeccCCCHHHHHHHhcC
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKR-TRIKALV--K-DKRN-AMESFGT--------Y-VESMAGDASNKKFLKTALRG 163 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~l~--R-~~~~-~~~~~~~--------~-v~~v~~D~~d~~~l~~~~~~ 163 (306)
++.+|.|.||||++|.++++.|..+. .++..+. + +..+ ..+.++- + .+...-++...+ .+++
T Consensus 18 ~~~kVaIvGAtG~vG~ell~lL~~hp~~el~~l~aS~~saGk~~~~~~~~~~~~~~p~~~~~~~v~~~~~~~----~~~~ 93 (381)
T 3hsk_A 18 SVKKAGVLGATGSVGQRFILLLSKHPEFEIHALGASSRSAGKKYKDAASWKQTETLPETEQDIVVQECKPEG----NFLE 93 (381)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEECTTTTTSBHHHHCCCCCSSCCCHHHHTCBCEESSSCT----TGGG
T ss_pred CccEEEEECCCChHHHHHHHHHHcCCCceEEEeeccccccCCCHHHhcccccccccccccccceEEeCchhh----hccc
Confidence 35689999999999999999887765 3665553 3 2222 2211110 0 011111221110 2578
Q ss_pred ccEEEEcCCchh----hhcccccCCCEEEEecCcc
Q 021854 164 VRSIICPSEGFI----SNAGSLKGVQHVILLSQLS 194 (306)
Q Consensus 164 ~d~vi~~~~g~~----~~~a~~~gvkr~V~iSS~~ 194 (306)
+|+||.+.+... .....++|++ +|-.|+..
T Consensus 94 ~Dvvf~alp~~~s~~~~~~~~~~G~~-VIDlSa~f 127 (381)
T 3hsk_A 94 CDVVFSGLDADVAGDIEKSFVEAGLA-VVSNAKNY 127 (381)
T ss_dssp CSEEEECCCHHHHHHHHHHHHHTTCE-EEECCSTT
T ss_pred CCEEEECCChhHHHHHHHHHHhCCCE-EEEcCCcc
Confidence 999999966542 2333456664 66667653
|
| >3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp} | Back alignment and structure |
|---|
Probab=96.02 E-value=0.014 Score=53.38 Aligned_cols=65 Identities=12% Similarity=0.121 Sum_probs=50.7
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEc
Q 021854 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (306)
Q Consensus 96 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~ 170 (306)
...+++|.|.|. |.||+.+++.|...|++|++..|++..... +... ....+++++++.+|+|+++
T Consensus 137 ~l~g~tvGIIGl-G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~-----~~~~----~~~~~l~ell~~aDvV~l~ 201 (324)
T 3hg7_A 137 GLKGRTLLILGT-GSIGQHIAHTGKHFGMKVLGVSRSGRERAG-----FDQV----YQLPALNKMLAQADVIVSV 201 (324)
T ss_dssp CSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCCCTT-----CSEE----ECGGGHHHHHHTCSEEEEC
T ss_pred ccccceEEEEEE-CHHHHHHHHHHHhCCCEEEEEcCChHHhhh-----hhcc----cccCCHHHHHhhCCEEEEe
Confidence 456899999998 999999999999999999999988743221 1111 1245788899999999977
|
| >3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum} | Back alignment and structure |
|---|
Probab=96.02 E-value=0.0079 Score=54.22 Aligned_cols=64 Identities=11% Similarity=-0.052 Sum_probs=50.1
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcCC
Q 021854 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE 172 (306)
Q Consensus 96 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~ 172 (306)
...+++|.|.|. |.||+.+++.|...|++|++..|+.++... ++ ..++++++++.+|+|+.+.+
T Consensus 119 ~l~g~tvGIIGl-G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~-----~~-------~~~~l~ell~~aDiV~l~~P 182 (290)
T 3gvx_A 119 LLYGKALGILGY-GGIGRRVAHLAKAFGMRVIAYTRSSVDQNV-----DV-------ISESPADLFRQSDFVLIAIP 182 (290)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSCCCTTC-----SE-------ECSSHHHHHHHCSEEEECCC
T ss_pred eeecchheeecc-CchhHHHHHHHHhhCcEEEEEecccccccc-----cc-------ccCChHHHhhccCeEEEEee
Confidence 346899999998 999999999999999999999998755321 11 12356778889999997733
|
| >1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=96.01 E-value=0.02 Score=52.97 Aligned_cols=94 Identities=12% Similarity=-0.015 Sum_probs=58.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEecCcchhhhhcCCCceeeeccCCC----H-HHHHHHh-cCccEEEEc
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGTYVESMAGDASN----K-KFLKTAL-RGVRSIICP 170 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~l~R~~~~~~~~~~~~v~~v~~D~~d----~-~~l~~~~-~~~d~vi~~ 170 (306)
.+++|||+|+ |.+|...++.+...|+ +|+++.+++++.+....-+...+ .|..+ . +.+.++. .++|+||.+
T Consensus 192 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~v-i~~~~~~~~~~~~~~~~~~~g~D~vid~ 269 (374)
T 1cdo_A 192 PGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDF-VNPNDHSEPISQVLSKMTNGGVDFSLEC 269 (374)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCCEE-ECGGGCSSCHHHHHHHHHTSCBSEEEEC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCceE-EeccccchhHHHHHHHHhCCCCCEEEEC
Confidence 4789999996 9999999988888998 79999888877432211122222 23332 1 2333333 368999988
Q ss_pred CCc-h-hhhcccc-cCC-CEEEEecCc
Q 021854 171 SEG-F-ISNAGSL-KGV-QHVILLSQL 193 (306)
Q Consensus 171 ~~g-~-~~~~a~~-~gv-kr~V~iSS~ 193 (306)
.++ . +..+.+. ..- .++|.++..
T Consensus 270 ~g~~~~~~~~~~~l~~~~G~iv~~G~~ 296 (374)
T 1cdo_A 270 VGNVGVMRNALESCLKGWGVSVLVGWT 296 (374)
T ss_dssp SCCHHHHHHHHHTBCTTTCEEEECSCC
T ss_pred CCCHHHHHHHHHHhhcCCcEEEEEcCC
Confidence 554 2 2222222 122 589888754
|
| >4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A* | Back alignment and structure |
|---|
Probab=96.00 E-value=0.0032 Score=56.29 Aligned_cols=37 Identities=11% Similarity=0.065 Sum_probs=33.8
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchh
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA 136 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~ 136 (306)
.++|.|.|+ |.+|..+++.|++.|++|++..|+++++
T Consensus 4 ~~kV~VIGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~ 40 (283)
T 4e12_A 4 ITNVTVLGT-GVLGSQIAFQTAFHGFAVTAYDINTDAL 40 (283)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHH
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEeCCHHHH
Confidence 478999988 9999999999999999999999998764
|
| >1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=96.00 E-value=0.013 Score=53.21 Aligned_cols=65 Identities=12% Similarity=-0.073 Sum_probs=49.4
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEc
Q 021854 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (306)
Q Consensus 96 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~ 170 (306)
...+++|.|.|. |.||+.+++.|...|++|++..|+.++.. ....+++. . +++++++++|+|+.+
T Consensus 139 ~l~g~~vgIiG~-G~IG~~~A~~l~~~G~~V~~~d~~~~~~~-~~~~g~~~-----~---~l~ell~~aDvV~l~ 203 (307)
T 1wwk_A 139 ELEGKTIGIIGF-GRIGYQVAKIANALGMNILLYDPYPNEER-AKEVNGKF-----V---DLETLLKESDVVTIH 203 (307)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCHHH-HHHTTCEE-----C---CHHHHHHHCSEEEEC
T ss_pred ccCCceEEEEcc-CHHHHHHHHHHHHCCCEEEEECCCCChhh-HhhcCccc-----c---CHHHHHhhCCEEEEe
Confidence 456899999987 99999999999999999999999886521 11112322 1 355678889999977
|
| >3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=95.99 E-value=0.033 Score=51.49 Aligned_cols=68 Identities=12% Similarity=0.178 Sum_probs=53.5
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEc
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~ 170 (306)
++|+|+|+ |.+|+.+++.+.+.|++|+++..++........+ ..+..|+.|.+.+.++.+++|.|+..
T Consensus 2 ~~Ililg~-g~~g~~~~~a~~~~G~~v~~~~~~~~~~~~~~~~--~~~~~~~~d~~~l~~~~~~~d~v~~~ 69 (380)
T 3ax6_A 2 KKIGIIGG-GQLGKMMTLEAKKMGFYVIVLDPTPRSPAGQVAD--EQIVAGFFDSERIEDLVKGSDVTTYD 69 (380)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSTTCTTGGGSS--EEEECCTTCHHHHHHHHHTCSEEEES
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhCc--eEEECCCCCHHHHHHHHhcCCEEEec
Confidence 78999998 8899999999999999999988765431111222 35677899999998888899998865
|
| >2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A* | Back alignment and structure |
|---|
Probab=95.99 E-value=0.014 Score=52.47 Aligned_cols=85 Identities=11% Similarity=0.065 Sum_probs=55.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchh-hhhcCCCceeeeccCCCHHHHHHHhc--CccEEEEcCCch
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-MESFGTYVESMAGDASNKKFLKTALR--GVRSIICPSEGF 174 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~-~~~~~~~v~~v~~D~~d~~~l~~~~~--~~d~vi~~~~g~ 174 (306)
+..+|+|.|++|.+|+.+++.+.+.|++++..+. +.+. .+.+ ++.+ +.+++++.+ .+|+++.+++..
T Consensus 6 ~~~rVaViG~sG~~G~~~~~~l~~~g~~~V~~V~-p~~~g~~~~--G~~v-------y~sl~el~~~~~~D~viI~tP~~ 75 (288)
T 2nu8_A 6 KNTKVICQGFTGSQGTFHSEQAIAYGTKMVGGVT-PGKGGTTHL--GLPV-------FNTVREAVAATGATASVIYVPAP 75 (288)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHTCEEEEEEC-TTCTTCEET--TEEE-------ESSHHHHHHHHCCCEEEECCCGG
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeC-CCcccceeC--Ceec-------cCCHHHHhhcCCCCEEEEecCHH
Confidence 3589999999999999999999998998664443 3221 1111 2222 123444455 799999885433
Q ss_pred ----hhhcccccCCCEEEEecC
Q 021854 175 ----ISNAGSLKGVQHVILLSQ 192 (306)
Q Consensus 175 ----~~~~a~~~gvkr~V~iSS 192 (306)
....+.++|++.+|.+++
T Consensus 76 ~~~~~~~ea~~~Gi~~iVi~t~ 97 (288)
T 2nu8_A 76 FCKDSILEAIDAGIKLIITITE 97 (288)
T ss_dssp GHHHHHHHHHHTTCSEEEECCC
T ss_pred HHHHHHHHHHHCCCCEEEEECC
Confidence 344566788887776665
|
| >2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=95.97 E-value=0.027 Score=52.53 Aligned_cols=73 Identities=10% Similarity=-0.008 Sum_probs=51.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEecCcchhhhhcCCCceeeeccCCC----HHHHHHHhc--CccEEEEc
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGTYVESMAGDASN----KKFLKTALR--GVRSIICP 170 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~l~R~~~~~~~~~~~~v~~v~~D~~d----~~~l~~~~~--~~d~vi~~ 170 (306)
.+++|||+|+ |.+|...++.+...|+ +|+++.+++++.+....-+.++ .|..+ .+.+.+... ++|+||.+
T Consensus 185 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~--i~~~~~~~~~~~~~~~~~g~g~Dvvid~ 261 (398)
T 2dph_A 185 PGSHVYIAGA-GPVGRCAAAGARLLGAACVIVGDQNPERLKLLSDAGFET--IDLRNSAPLRDQIDQILGKPEVDCGVDA 261 (398)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHTTTCEE--EETTSSSCHHHHHHHHHSSSCEEEEEEC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCcE--EcCCCcchHHHHHHHHhCCCCCCEEEEC
Confidence 5789999997 9999999987777898 8999999887744322223443 34433 344555544 58999988
Q ss_pred CCc
Q 021854 171 SEG 173 (306)
Q Consensus 171 ~~g 173 (306)
.++
T Consensus 262 ~g~ 264 (398)
T 2dph_A 262 VGF 264 (398)
T ss_dssp SCT
T ss_pred CCC
Confidence 543
|
| >3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A* | Back alignment and structure |
|---|
Probab=95.97 E-value=0.03 Score=53.14 Aligned_cols=67 Identities=13% Similarity=0.101 Sum_probs=51.5
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcC
Q 021854 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS 171 (306)
Q Consensus 96 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~ 171 (306)
...+++|+|.|. |.||+.+++.|...|++|++..+++.+.......+++.. +++++++++|+|+.+.
T Consensus 208 ~L~GktVgIiG~-G~IG~~vA~~Lka~Ga~Viv~D~~p~~a~~A~~~G~~~~--------sL~eal~~ADVVilt~ 274 (436)
T 3h9u_A 208 MIAGKTACVCGY-GDVGKGCAAALRGFGARVVVTEVDPINALQAAMEGYQVL--------LVEDVVEEAHIFVTTT 274 (436)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEEC--------CHHHHTTTCSEEEECS
T ss_pred cccCCEEEEEee-CHHHHHHHHHHHHCCCEEEEECCChhhhHHHHHhCCeec--------CHHHHHhhCCEEEECC
Confidence 345799999997 999999999999999999999888765432222233321 4778899999999863
|
| >4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A* | Back alignment and structure |
|---|
Probab=95.89 E-value=0.013 Score=54.46 Aligned_cols=90 Identities=13% Similarity=-0.006 Sum_probs=52.3
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCC-CeEEEEecCcc---hhhhhcCC--------Cc-eeeeccCCCHHHHHHHhcCcc
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKR---NAMESFGT--------YV-ESMAGDASNKKFLKTALRGVR 165 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~l~R~~~---~~~~~~~~--------~v-~~v~~D~~d~~~l~~~~~~~d 165 (306)
+.+|.|.||||++|.++++.|..+. .++..+....+ +..+.++- +. +...-++ +.+ .+.++|
T Consensus 7 ~~kVaIvGATGyvG~eLlrlL~~hP~~el~~l~S~~saGk~~~~~~p~~~~~~~~~~~~~~~v~~~-~~~----~~~~vD 81 (359)
T 4dpk_A 7 TLKAAILGATGLVGIEYVRMLSNHPYIKPAYLAGKGSVGKPYGEVVRWQTVGQVPKEIADMEIKPT-DPK----LMDDVD 81 (359)
T ss_dssp CEEEEETTTTSTTHHHHHHHHTTCSSEEEEEEEESTTTTSBHHHHCCCCSSSCCCHHHHTCBCEEC-CGG----GCTTCC
T ss_pred CCeEEEECCCCHHHHHHHHHHHhCCCceEEEEECchhcCCChhHhcccccccccccccccceEEeC-CHH----HhcCCC
Confidence 4689999999999999999777654 46666643322 12222220 00 1111111 222 257899
Q ss_pred EEEEcCCchh----hhcccccCCCEEEEecCcc
Q 021854 166 SIICPSEGFI----SNAGSLKGVQHVILLSQLS 194 (306)
Q Consensus 166 ~vi~~~~g~~----~~~a~~~gvkr~V~iSS~~ 194 (306)
+||.+.+... .....++|+ ++|-+|+..
T Consensus 82 vvf~a~p~~~s~~~a~~~~~~G~-~vIDlSa~~ 113 (359)
T 4dpk_A 82 IIFSPLPQGAAGPVEEQFAKEGF-PVISNSPDH 113 (359)
T ss_dssp EEEECCCTTTHHHHHHHHHHTTC-EEEECSSTT
T ss_pred EEEECCChHHHHHHHHHHHHCCC-EEEEcCCCc
Confidence 9999866442 223345676 566677753
|
| >4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A* | Back alignment and structure |
|---|
Probab=95.89 E-value=0.013 Score=54.46 Aligned_cols=90 Identities=13% Similarity=-0.006 Sum_probs=52.3
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCC-CeEEEEecCcc---hhhhhcCC--------Cc-eeeeccCCCHHHHHHHhcCcc
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKR---NAMESFGT--------YV-ESMAGDASNKKFLKTALRGVR 165 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~l~R~~~---~~~~~~~~--------~v-~~v~~D~~d~~~l~~~~~~~d 165 (306)
+.+|.|.||||++|.++++.|..+. .++..+....+ +..+.++- +. +...-++ +.+ .+.++|
T Consensus 7 ~~kVaIvGATGyvG~eLlrlL~~hP~~el~~l~S~~saGk~~~~~~p~~~~~~~~~~~~~~~v~~~-~~~----~~~~vD 81 (359)
T 4dpl_A 7 TLKAAILGATGLVGIEYVRMLSNHPYIKPAYLAGKGSVGKPYGEVVRWQTVGQVPKEIADMEIKPT-DPK----LMDDVD 81 (359)
T ss_dssp CEEEEETTTTSTTHHHHHHHHTTCSSEEEEEEEESTTTTSBHHHHCCCCSSSCCCHHHHTCBCEEC-CGG----GCTTCC
T ss_pred CCeEEEECCCCHHHHHHHHHHHhCCCceEEEEECchhcCCChhHhcccccccccccccccceEEeC-CHH----HhcCCC
Confidence 4689999999999999999777654 46666643322 12222220 00 1111111 222 257899
Q ss_pred EEEEcCCchh----hhcccccCCCEEEEecCcc
Q 021854 166 SIICPSEGFI----SNAGSLKGVQHVILLSQLS 194 (306)
Q Consensus 166 ~vi~~~~g~~----~~~a~~~gvkr~V~iSS~~ 194 (306)
+||.+.+... .....++|+ ++|-+|+..
T Consensus 82 vvf~a~p~~~s~~~a~~~~~~G~-~vIDlSa~~ 113 (359)
T 4dpl_A 82 IIFSPLPQGAAGPVEEQFAKEGF-PVISNSPDH 113 (359)
T ss_dssp EEEECCCTTTHHHHHHHHHHTTC-EEEECSSTT
T ss_pred EEEECCChHHHHHHHHHHHHCCC-EEEEcCCCc
Confidence 9999866442 223345676 566677753
|
| >1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A* | Back alignment and structure |
|---|
Probab=95.89 E-value=0.0071 Score=53.80 Aligned_cols=69 Identities=14% Similarity=0.118 Sum_probs=47.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhc---CCCceeeeccCCCHHHHHHHhcCccEEEEcCC
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF---GTYVESMAGDASNKKFLKTALRGVRSIICPSE 172 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~---~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~ 172 (306)
.+++++|+|+ |++|+.++..|++.|++|++..|+.+++.+.. +....+...|+ +.+.+ .++|+||++++
T Consensus 118 ~~~~vlvlGa-Gg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~~~~~~~~~~~---~~~~~--~~~DivIn~t~ 189 (272)
T 1p77_A 118 PNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQAVSM---DSIPL--QTYDLVINATS 189 (272)
T ss_dssp TTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSCEEEEEG---GGCCC--SCCSEEEECCC
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHccccCCeEEeeH---HHhcc--CCCCEEEECCC
Confidence 4689999998 88999999999999999999999987744332 21001112232 11110 37899999844
|
| >2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=95.89 E-value=0.011 Score=53.85 Aligned_cols=60 Identities=12% Similarity=-0.005 Sum_probs=48.3
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEc
Q 021854 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (306)
Q Consensus 96 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~ 170 (306)
...+++|.|.|. |.||+.+++.|...|++|++..|+.++.. .+. .+++++++.+|+|+.+
T Consensus 141 ~l~g~~vgIIG~-G~IG~~~A~~l~~~G~~V~~~d~~~~~~~-----------~~~---~~l~ell~~aDvV~l~ 200 (311)
T 2cuk_A 141 DLQGLTLGLVGM-GRIGQAVAKRALAFGMRVVYHARTPKPLP-----------YPF---LSLEELLKEADVVSLH 200 (311)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCSSS-----------SCB---CCHHHHHHHCSEEEEC
T ss_pred CCCCCEEEEEEE-CHHHHHHHHHHHHCCCEEEEECCCCcccc-----------ccc---CCHHHHHhhCCEEEEe
Confidence 456799999987 99999999999999999999988875431 122 3456778899999977
|
| >3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus} | Back alignment and structure |
|---|
Probab=95.88 E-value=0.018 Score=54.77 Aligned_cols=67 Identities=19% Similarity=0.130 Sum_probs=50.7
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcC
Q 021854 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS 171 (306)
Q Consensus 96 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~ 171 (306)
...+++++|.|. |.||+.+++.|...|.+|++..+++.........+++++ .++++++.+|+|+.++
T Consensus 244 ~L~GKTVgVIG~-G~IGr~vA~~lrafGa~Viv~d~dp~~a~~A~~~G~~vv--------~LeElL~~ADIVv~at 310 (464)
T 3n58_A 244 MMAGKVAVVCGY-GDVGKGSAQSLAGAGARVKVTEVDPICALQAAMDGFEVV--------TLDDAASTADIVVTTT 310 (464)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEEC--------CHHHHGGGCSEEEECC
T ss_pred cccCCEEEEECc-CHHHHHHHHHHHHCCCEEEEEeCCcchhhHHHhcCceec--------cHHHHHhhCCEEEECC
Confidence 456899999997 999999999999999999999888755332222233332 2457888999999874
|
| >3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A* | Back alignment and structure |
|---|
Probab=95.88 E-value=0.011 Score=53.83 Aligned_cols=68 Identities=10% Similarity=-0.008 Sum_probs=49.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCC--eEEEEecCcchhhhhcCCCce-eeeccCCCHHHHHH-HhcCccEEEEcCC
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRT--RIKALVKDKRNAMESFGTYVE-SMAGDASNKKFLKT-ALRGVRSIICPSE 172 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~--~V~~l~R~~~~~~~~~~~~v~-~v~~D~~d~~~l~~-~~~~~d~vi~~~~ 172 (306)
+.++|.|.|+ |.+|..+++.|.+.|+ +|++..|++++.......++. ....| +.+ +++++|+||.+.+
T Consensus 32 ~~~kI~IIG~-G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~G~~~~~~~~------~~~~~~~~aDvVilavp 103 (314)
T 3ggo_A 32 SMQNVLIVGV-GFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTS------IAKVEDFSPDFVMLSSP 103 (314)
T ss_dssp SCSEEEEESC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESC------TTGGGGGCCSEEEECSC
T ss_pred CCCEEEEEee-CHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHCCCcchhcCC------HHHHhhccCCEEEEeCC
Confidence 4589999995 9999999999999999 999999998765433222221 11122 234 5788999998854
|
| >3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A* | Back alignment and structure |
|---|
Probab=95.87 E-value=0.019 Score=52.50 Aligned_cols=66 Identities=14% Similarity=0.120 Sum_probs=48.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCC--eEEEEecCcchhhh----h---cC---CCceeeeccCCCHHHHHHHhcCcc
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRT--RIKALVKDKRNAME----S---FG---TYVESMAGDASNKKFLKTALRGVR 165 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~--~V~~l~R~~~~~~~----~---~~---~~v~~v~~D~~d~~~l~~~~~~~d 165 (306)
..++|.|+|| |.+|..++..|+..|. +|+++.++.+++.. + .+ .++++...| .++++++|
T Consensus 4 ~~~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~-------~~a~~~aD 75 (326)
T 3pqe_A 4 HVNKVALIGA-GFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGT-------YEDCKDAD 75 (326)
T ss_dssp SCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEEC-------GGGGTTCS
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCc-------HHHhCCCC
Confidence 3689999997 9999999999999886 89999988766322 1 11 234443333 24689999
Q ss_pred EEEEcC
Q 021854 166 SIICPS 171 (306)
Q Consensus 166 ~vi~~~ 171 (306)
+||+++
T Consensus 76 vVvi~a 81 (326)
T 3pqe_A 76 IVCICA 81 (326)
T ss_dssp EEEECC
T ss_pred EEEEec
Confidence 999873
|
| >3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A* | Back alignment and structure |
|---|
Probab=95.87 E-value=0.016 Score=54.95 Aligned_cols=66 Identities=15% Similarity=0.076 Sum_probs=50.6
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEc
Q 021854 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (306)
Q Consensus 96 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~ 170 (306)
...+++|+|.|+ |.||+.+++.|...|.+|++..+++.+.......+++.. +++++++++|+|+.+
T Consensus 217 ~L~GktV~ViG~-G~IGk~vA~~Lra~Ga~Viv~D~dp~ra~~A~~~G~~v~--------~Leeal~~ADIVi~a 282 (435)
T 3gvp_A 217 MFGGKQVVVCGY-GEVGKGCCAALKAMGSIVYVTEIDPICALQACMDGFRLV--------KLNEVIRQVDIVITC 282 (435)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEEC--------CHHHHTTTCSEEEEC
T ss_pred eecCCEEEEEee-CHHHHHHHHHHHHCCCEEEEEeCChhhhHHHHHcCCEec--------cHHHHHhcCCEEEEC
Confidence 346899999998 999999999999999999999888755332222223221 357789999999987
|
| >1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A* | Back alignment and structure |
|---|
Probab=95.87 E-value=0.02 Score=52.32 Aligned_cols=77 Identities=8% Similarity=0.019 Sum_probs=54.6
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh---cCCCce-eeeccCCCHHHHHHHhcCccEEEEcC
Q 021854 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVE-SMAGDASNKKFLKTALRGVRSIICPS 171 (306)
Q Consensus 96 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~---~~~~v~-~v~~D~~d~~~l~~~~~~~d~vi~~~ 171 (306)
...+++++|.|++.-+|+.+++.|+..|.+|+++.|+..+..+. +..... ......++.+.+.+.++.+|+||.++
T Consensus 174 ~l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~~ra~~la~~~~~~t~~~~t~~~~L~e~l~~ADIVIsAt 253 (320)
T 1edz_A 174 RLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLKLNKHHVEDLGEYSEDLLKKCSLDSDVVITGV 253 (320)
T ss_dssp TTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSSCCCCEEEEEEECCHHHHHHHHHHCSEEEECC
T ss_pred CCCCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHHHHhHHHHHhhhcccccccccccHhHHHHHhccCCEEEECC
Confidence 45689999999977889999999999999999998885442211 111111 11111134578999999999999984
Q ss_pred C
Q 021854 172 E 172 (306)
Q Consensus 172 ~ 172 (306)
+
T Consensus 254 g 254 (320)
T 1edz_A 254 P 254 (320)
T ss_dssp C
T ss_pred C
Confidence 3
|
| >2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ... | Back alignment and structure |
|---|
Probab=95.87 E-value=0.023 Score=52.45 Aligned_cols=92 Identities=14% Similarity=0.085 Sum_probs=57.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEecCcchhhh--hcCCCceeeeccCCC-----HHHHHHHh-cCccEEE
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAME--SFGTYVESMAGDASN-----KKFLKTAL-RGVRSII 168 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~l~R~~~~~~~--~~~~~v~~v~~D~~d-----~~~l~~~~-~~~d~vi 168 (306)
.+++|||+|+ |.+|...++.+...|+ +|+++.+++++.+. .++ ...+ .|..+ .+.+.++. .++|+||
T Consensus 191 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lG--a~~v-i~~~~~~~~~~~~~~~~~~~g~D~vi 266 (374)
T 2jhf_A 191 QGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVG--ATEC-VNPQDYKKPIQEVLTEMSNGGVDFSF 266 (374)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTT--CSEE-ECGGGCSSCHHHHHHHHTTSCBSEEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhC--CceE-ecccccchhHHHHHHHHhCCCCcEEE
Confidence 4789999996 9999999988888998 79999888877432 233 2221 23332 22333333 2689999
Q ss_pred EcCCc-h-hhhcccc-cCC-CEEEEecCc
Q 021854 169 CPSEG-F-ISNAGSL-KGV-QHVILLSQL 193 (306)
Q Consensus 169 ~~~~g-~-~~~~a~~-~gv-kr~V~iSS~ 193 (306)
.+.++ . +..+.+. ..- .++|.++..
T Consensus 267 d~~g~~~~~~~~~~~l~~~~G~iv~~G~~ 295 (374)
T 2jhf_A 267 EVIGRLDTMVTALSCCQEAYGVSVIVGVP 295 (374)
T ss_dssp ECSCCHHHHHHHHHHBCTTTCEEEECSCC
T ss_pred ECCCCHHHHHHHHHHhhcCCcEEEEeccC
Confidence 88554 2 2222222 122 588887654
|
| >3tz6_A Aspartate-semialdehyde dehydrogenase; asadh, ASD, ASA, amino-acid biosynthesis, diaminopimelate biosynthesis, lysine biosynthesis; HET: SO4; 1.95A {Mycobacterium tuberculosis} PDB: 3vos_A* 3kub_A 3llg_A | Back alignment and structure |
|---|
Probab=95.86 E-value=0.016 Score=53.56 Aligned_cols=87 Identities=15% Similarity=0.156 Sum_probs=51.9
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCC---eEEEEecCcc--hhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcCCc
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKRT---RIKALVKDKR--NAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG 173 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g~---~V~~l~R~~~--~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~g 173 (306)
+.+|.|.||||++|.++++.|..+.+ ++..+.-..+ +... +.. .+...-++.+ ..++++|+||.+++.
T Consensus 1 ~~~VaIvGatG~vG~el~~lL~~h~fp~~el~~~~s~~~aG~~~~-~~~-~~~~~~~~~~-----~~~~~~Dvvf~a~~~ 73 (344)
T 3tz6_A 1 GLSIGIVGATGQVGQVMRTLLDERDFPASAVRFFASARSQGRKLA-FRG-QEIEVEDAET-----ADPSGLDIALFSAGS 73 (344)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTSSCEEE-ETT-EEEEEEETTT-----SCCTTCSEEEECSCH
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCCceEEEEEECcccCCCcee-ecC-CceEEEeCCH-----HHhccCCEEEECCCh
Confidence 35899999999999999998888754 3555432221 1111 211 1222223322 235789999998765
Q ss_pred hh----hhcccccCCCEEEEecCc
Q 021854 174 FI----SNAGSLKGVQHVILLSQL 193 (306)
Q Consensus 174 ~~----~~~a~~~gvkr~V~iSS~ 193 (306)
.. .....++|+ ++|-.|+.
T Consensus 74 ~~s~~~a~~~~~~G~-~vID~Sa~ 96 (344)
T 3tz6_A 74 AMSKVQAPRFAAAGV-TVIDNSSA 96 (344)
T ss_dssp HHHHHHHHHHHHTTC-EEEECSST
T ss_pred HHHHHHHHHHHhCCC-EEEECCCc
Confidence 42 223345676 56667764
|
| >3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A* | Back alignment and structure |
|---|
Probab=95.86 E-value=0.0086 Score=55.03 Aligned_cols=64 Identities=9% Similarity=-0.030 Sum_probs=49.5
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcCC
Q 021854 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE 172 (306)
Q Consensus 96 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~ 172 (306)
+..+++|.|.|. |.||+.+++.|...|++|++..|+.++.. ++.. . .+++++++++|+|+.+.+
T Consensus 161 ~l~g~~vgIIG~-G~iG~~vA~~l~~~G~~V~~~dr~~~~~~-----g~~~----~---~~l~ell~~aDvVil~vP 224 (333)
T 3ba1_A 161 KFSGKRVGIIGL-GRIGLAVAERAEAFDCPISYFSRSKKPNT-----NYTY----Y---GSVVELASNSDILVVACP 224 (333)
T ss_dssp CCTTCCEEEECC-SHHHHHHHHHHHTTTCCEEEECSSCCTTC-----CSEE----E---SCHHHHHHTCSEEEECSC
T ss_pred ccCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEECCCchhcc-----Ccee----c---CCHHHHHhcCCEEEEecC
Confidence 456789999998 99999999999999999999998875432 1211 1 235677889999998733
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 306 | ||||
| d1hdoa_ | 205 | c.2.1.2 (A:) Biliverdin IX beta reductase {Human ( | 3e-09 | |
| d2q46a1 | 252 | c.2.1.2 (A:2-253) Hypothetical protein At5g02240 ( | 5e-05 |
| >d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 205 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Biliverdin IX beta reductase species: Human (Homo sapiens) [TaxId: 9606]
Score = 53.9 bits (128), Expect = 3e-09
Identities = 22/187 (11%), Positives = 49/187 (26%), Gaps = 16/187 (8%)
Query: 102 VLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTAL 161
+ + G + + + LV+D + GD + +
Sbjct: 6 IAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAADVDKTV 65
Query: 162 RGVRSIIC------PSEGFISN---------AGSLKGVQHVILLSQLSVYRGSGGIQALM 206
G ++I A GV V+ + + + +
Sbjct: 66 AGQDAVIVLLGTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTKVPPRL 125
Query: 207 KGNARKLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFI 266
+ +L SG+ Y + + + P +G + +SK D
Sbjct: 126 QAVTDDHIRM-HKVLRESGLKYVAVMPPHIGDQPLTGAYTVTLDGRGPSRVISKHDLGHF 184
Query: 267 CVEALES 273
+ L +
Sbjct: 185 MLRCLTT 191
|
| >d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 252 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein At5g02240 (T7H20 290) species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 41.7 bits (96), Expect = 5e-05
Identities = 21/85 (24%), Positives = 37/85 (43%), Gaps = 8/85 (9%)
Query: 227 PYTIIRTGVLQNTPGGKQGFQFEEG----CAANGSLSKEDAAFICVEALESIPQTGLIFE 282
PYTIIR G L + GG + + ++ + D A +C++AL F+
Sbjct: 167 PYTIIRAGGLLDKEGGVRELLVGKDDELLQTDTKTVPRADVAEVCIQALLFEEAKNKAFD 226
Query: 283 VVNGEE----KVSDWKKCFSRLMEK 303
+ + E D+K FS++ +
Sbjct: 227 LGSKPEGTSTPTKDFKALFSQVTSR 251
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 306 | |||
| d1hdoa_ | 205 | Biliverdin IX beta reductase {Human (Homo sapiens) | 99.97 | |
| d2q46a1 | 252 | Hypothetical protein At5g02240 (T7H20_290) {Thale | 99.93 | |
| d1qyda_ | 312 | Pinoresinol-lariciresinol reductase {Giant arborvi | 99.9 | |
| d2c5aa1 | 363 | GDP-mannose-3', 5'-epimerase {Thale cress (Arabido | 99.89 | |
| d2bkaa1 | 232 | TAT-interacting protein TIP30 {Human (Homo sapiens | 99.88 | |
| d1qyca_ | 307 | Phenylcoumaran benzylic ether reductase {Loblolly | 99.88 | |
| d1db3a_ | 357 | GDP-mannose 4,6-dehydratase {Escherichia coli [Tax | 99.87 | |
| d1xgka_ | 350 | Negative transcriptional regulator NmrA {Aspergill | 99.86 | |
| d1udca_ | 338 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.85 | |
| d2b69a1 | 312 | UDP-glucuronate decarboxylase 1 {Human (Homo sapie | 99.85 | |
| d1sb8a_ | 341 | UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo | 99.85 | |
| d1r6da_ | 322 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces | 99.84 | |
| d1kewa_ | 361 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 99.84 | |
| d2blla1 | 342 | Polymyxin resistance protein ArnA (PrmI) {Escheric | 99.83 | |
| d1y1pa1 | 342 | Aldehyde reductase II {Sporobolomyces salmonicolor | 99.83 | |
| d1oc2a_ | 346 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 99.82 | |
| d1ek6a_ | 346 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.82 | |
| d1z45a2 | 347 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.82 | |
| d1rpna_ | 321 | GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos | 99.81 | |
| d1i24a_ | 393 | Sulfolipid biosynthesis protein SQD1 {Thale cress | 99.8 | |
| d1t2aa_ | 347 | GDP-mannose 4,6-dehydratase {Human (Homo sapiens) | 99.78 | |
| d1gy8a_ | 383 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.78 | |
| d2a35a1 | 212 | Hypothetical protein PA4017 {Pseudomonas aeruginos | 99.78 | |
| d1n7ha_ | 339 | GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop | 99.76 | |
| d1orra_ | 338 | CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: | 99.76 | |
| d1nffa_ | 244 | Putative oxidoreductase Rv2002 {Mycobacterium tube | 99.76 | |
| d1vl0a_ | 281 | DTDP-4-dehydrorhamnose reductase RfbD {Clostridium | 99.76 | |
| d1e6ua_ | 315 | GDP-4-keto-6-deoxy-d-mannose epimerase/reductase ( | 99.74 | |
| d1q7ba_ | 243 | beta-keto acyl carrier protein reductase {Escheric | 99.74 | |
| d2ew8a1 | 247 | (s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb | 99.73 | |
| d1hdca_ | 254 | 3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre | 99.73 | |
| d1pr9a_ | 244 | Carbonyl reductase {Human (Homo sapiens) [TaxId: 9 | 99.73 | |
| d2c07a1 | 251 | beta-keto acyl carrier protein reductase {Malaria | 99.72 | |
| d2d1ya1 | 248 | Hypothetical protein TTHA0369 {Thermus thermophilu | 99.72 | |
| d1zk4a1 | 251 | R-specific alcohol dehydrogenase {Lactobacillus br | 99.71 | |
| d1vl8a_ | 251 | Gluconate 5-dehydrogenase {Thermotoga maritima [Ta | 99.71 | |
| d1ulsa_ | 242 | beta-keto acyl carrier protein reductase {Thermus | 99.71 | |
| d1k2wa_ | 256 | Sorbitol dehydrogenase {Rhodobacter sphaeroides [T | 99.71 | |
| d1cyda_ | 242 | Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1 | 99.7 | |
| d1x1ta1 | 260 | D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas | 99.7 | |
| d1uzma1 | 237 | beta-keto acyl carrier protein reductase {Mycobact | 99.7 | |
| d1fmca_ | 255 | 7-alpha-hydroxysteroid dehydrogenase {Escherichia | 99.7 | |
| d1ae1a_ | 258 | Tropinone reductase {Jimsonweed (Datura stramonium | 99.69 | |
| d1geea_ | 261 | Glucose dehydrogenase {Bacillus megaterium [TaxId: | 99.68 | |
| d1xq1a_ | 259 | Tropinone reductase {Thale cress (Arabidopsis thal | 99.68 | |
| d1rkxa_ | 356 | CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc | 99.68 | |
| d1iy8a_ | 258 | Levodione reductase {Corynebacterium aquaticum [Ta | 99.68 | |
| d1ydea1 | 250 | Retinal dehydrogenase/reductase 3 {Human (Homo sap | 99.67 | |
| d1n2sa_ | 298 | dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S | 99.67 | |
| d2gdza1 | 254 | 15-hydroxyprostaglandin dehydrogenase, PGDH {Human | 99.67 | |
| d1hxha_ | 253 | 3beta/17beta hydroxysteroid dehydrogenase {Comamon | 99.67 | |
| d1zema1 | 260 | Xylitol dehydrogenase {Gluconobacter oxydans [TaxI | 99.67 | |
| d2bgka1 | 268 | Rhizome secoisolariciresinol dehydrogenase {Mayapp | 99.67 | |
| d1edoa_ | 244 | beta-keto acyl carrier protein reductase {Oil seed | 99.66 | |
| d2ae2a_ | 259 | Tropinone reductase {Jimsonweed (Datura stramonium | 99.66 | |
| d1o5ia_ | 234 | beta-keto acyl carrier protein reductase {Thermoto | 99.66 | |
| d1yb1a_ | 244 | 17-beta-hydroxysteroid dehydrogenase type XI {Huma | 99.66 | |
| d1gega_ | 255 | meso-2,3-butanediol dehydrogenase {Klebsiella pneu | 99.65 | |
| d2bd0a1 | 240 | Bacterial sepiapterin reductase {Chlorobium tepidu | 99.65 | |
| d2fr1a1 | 259 | Erythromycin synthase, eryAI, 1st ketoreductase mo | 99.64 | |
| d1w6ua_ | 294 | 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H | 99.63 | |
| d2rhca1 | 257 | beta-keto acyl carrier protein reductase {Streptom | 99.63 | |
| d1spxa_ | 264 | Glucose dehydrogenase (5l265) {Nematode (Caenorhab | 99.63 | |
| d1sbya1 | 254 | Drosophila alcohol dehydrogenase {Fly (Drosophila | 99.61 | |
| d1xhla_ | 274 | Hypothetical protein F25D1.5 {Caenorhabditis elega | 99.61 | |
| d1yxma1 | 297 | Peroxisomal trans 2-enoyl CoA reductase {Human (Ho | 99.61 | |
| d1ulua_ | 256 | Enoyl-ACP reductase {Thermus thermophilus [TaxId: | 99.6 | |
| d1bdba_ | 276 | Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps | 99.6 | |
| d2a4ka1 | 241 | beta-keto acyl carrier protein reductase {Thermus | 99.6 | |
| d1xg5a_ | 257 | Putative dehydrogenase ARPG836 (MGC4172) {Human (H | 99.6 | |
| d1xkqa_ | 272 | Hypothetical protein R05D8.7 {Caenorhabditis elega | 99.59 | |
| d1h5qa_ | 260 | Mannitol dehydrogenase {Mushroom (Agaricus bisporu | 99.59 | |
| d1zmta1 | 252 | Halohydrin dehalogenase HheC {Agrobacterium tumefa | 99.58 | |
| d2ag5a1 | 245 | Dehydrogenase/reductase SDR family member 6, DHRS6 | 99.57 | |
| d1ja9a_ | 259 | 1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl | 99.57 | |
| d1gz6a_ | 302 | (3R)-hydroxyacyl-CoA dehydrogenase domain of estra | 99.57 | |
| d2o23a1 | 248 | Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho | 99.56 | |
| d1oaaa_ | 259 | Sepiapterin reductase {Mouse (Mus musculus) [TaxId | 99.53 | |
| d1g0oa_ | 272 | 1,3,8-trihydroxynaphtalene reductase (THNR, naphto | 99.53 | |
| d1jtva_ | 285 | Human estrogenic 17beta-hydroxysteroid dehydrogena | 99.53 | |
| d1snya_ | 248 | Carbonyl reductase sniffer {Fruit fly (Drosophila | 99.5 | |
| d1uaya_ | 241 | Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t | 99.49 | |
| d1eq2a_ | 307 | ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric | 99.49 | |
| d1yo6a1 | 250 | Putative carbonyl reductase sniffer {Caenorhabditi | 99.48 | |
| d2pd4a1 | 274 | Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2 | 99.43 | |
| d1xu9a_ | 269 | 11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom | 99.42 | |
| d1qsga_ | 258 | Enoyl-ACP reductase {Escherichia coli [TaxId: 562] | 99.41 | |
| d1wmaa1 | 275 | Carbonyl reductase/20beta-hydroxysteroid dehydroge | 99.38 | |
| d1e7wa_ | 284 | Dihydropteridin reductase (pteridine reductase) {L | 99.37 | |
| d1dhra_ | 236 | Dihydropteridin reductase (pteridine reductase) {R | 99.36 | |
| d1mxha_ | 266 | Dihydropteridin reductase (pteridine reductase) {T | 99.34 | |
| d2h7ma1 | 268 | Enoyl-ACP reductase {Mycobacterium tuberculosis, T | 99.29 | |
| d1ooea_ | 235 | Dihydropteridin reductase (pteridine reductase) {N | 99.29 | |
| d1luaa1 | 191 | Methylene-tetrahydromethanopterin dehydrogenase {M | 99.12 | |
| d1fjha_ | 257 | 3-alpha-hydroxysteroid dehydrogenase {Comamonas te | 99.1 | |
| d1d7oa_ | 297 | Enoyl-ACP reductase {Oil seed rape (Brassica napus | 99.04 | |
| d1uh5a_ | 329 | Enoyl-ACP reductase {Malaria parasite (Plasmodium | 98.75 | |
| d1lssa_ | 132 | Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax | 98.57 | |
| d2hmva1 | 134 | Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | 98.4 | |
| d1e5qa1 | 182 | Saccharopine reductase {Rice blast fungus (Magnapo | 98.07 | |
| d1jaya_ | 212 | Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae | 97.89 | |
| d1iz0a2 | 171 | Quinone oxidoreductase {Thermus thermophilus [TaxI | 97.77 | |
| d1t4ba1 | 146 | Aspartate beta-semialdehyde dehydrogenase {Escheri | 97.73 | |
| d1bg6a2 | 184 | N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A | 97.66 | |
| d1id1a_ | 153 | Rck domain from putative potassium channel Kch {Es | 97.66 | |
| d1pqwa_ | 183 | Putative enoyl reductase domain of polyketide synt | 97.6 | |
| d1v3va2 | 182 | Leukotriene b4 12-hydroxydehydrogenase/prostagland | 97.56 | |
| d1mb4a1 | 147 | Aspartate beta-semialdehyde dehydrogenase {Vibrio | 97.54 | |
| d1gpja2 | 159 | Glutamyl tRNA-reductase middle domain {Archaeon Me | 97.51 | |
| d1ks9a2 | 167 | Ketopantoate reductase PanE {Escherichia coli [Tax | 97.47 | |
| d1yb5a2 | 174 | Quinone oxidoreductase {Human (Homo sapiens) [TaxI | 97.46 | |
| d1qora2 | 179 | Quinone oxidoreductase {Escherichia coli [TaxId: 5 | 97.44 | |
| d1xa0a2 | 176 | B. subtilis YhfP homologue {Bacillus stearothermop | 97.42 | |
| d1vi2a1 | 182 | Putative shikimate dehydrogenase YdiB {Escherichia | 97.38 | |
| d1vkna1 | 176 | N-acetyl-gamma-glutamyl-phosphate reductase ArgC { | 97.31 | |
| d2f1ka2 | 165 | Prephenate dehydrogenase TyrA {Synechocystis sp. p | 97.3 | |
| d1o8ca2 | 77 | Hypothetical protein YhdH {Escherichia coli [TaxId | 97.28 | |
| d2jfga1 | 93 | UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase | 97.22 | |
| d1pjqa1 | 113 | Siroheme synthase CysG, domain 1 {Salmonella typhi | 97.2 | |
| d1kjqa2 | 111 | Glycinamide ribonucleotide transformylase PurT, N- | 97.19 | |
| d1mlda1 | 144 | Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 | 97.13 | |
| d2fy8a1 | 129 | Potassium channel-related protein MthK {Archaeon M | 97.1 | |
| d1hyea1 | 145 | MJ0490, lactate/malate dehydrogenase {Archaeon Met | 97.08 | |
| d1nyta1 | 170 | Shikimate 5-dehydrogenase AroE {Escherichia coli [ | 97.06 | |
| d1uufa2 | 168 | Hypothetical protein YahK {Escherichia coli [TaxId | 97.05 | |
| d1ez4a1 | 146 | Lactate dehydrogenase {Lactobacillus pentosus [Tax | 97.0 | |
| d1piwa2 | 168 | Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas | 96.97 | |
| d1txga2 | 180 | Glycerol-3- phosphate dehydrogenase {Archaeoglobus | 96.97 | |
| d1yqga2 | 152 | Pyrroline-5-carboxylate reductase ProC {Neisseria | 96.93 | |
| d1n1ea2 | 189 | Glycerol-3- phosphate dehydrogenase {Trypanosome ( | 96.93 | |
| d1vpda2 | 161 | Hydroxyisobutyrate dehydrogenase {Salmonella typhi | 96.91 | |
| d1tt7a2 | 167 | Hypothetical protein YhfP {Bacillus subtilis [TaxI | 96.86 | |
| d1i36a2 | 152 | Conserved hypothetical protein MTH1747 {Archaeon M | 96.85 | |
| d2hjsa1 | 144 | Usg-1 protein homolog PA3116 {Pseudomonas aerugino | 96.84 | |
| d1mv8a2 | 202 | GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos | 96.81 | |
| d1o89a2 | 177 | Hypothetical protein YhdH {Escherichia coli [TaxId | 96.77 | |
| d1u7za_ | 223 | Coenzyme A biosynthesis bifunctional protein CoaBC | 96.76 | |
| d2pv7a2 | 152 | Prephenate dehydrogenase TyrA {Haemophilus influen | 96.73 | |
| d2ahra2 | 152 | Pyrroline-5-carboxylate reductase ProC {Streptococ | 96.72 | |
| d1vj1a2 | 187 | Putative zinc-binding alcohol dehydrogenase {Mouse | 96.65 | |
| d1vj0a2 | 182 | Hypothetical protein TM0436 {Thermotoga maritima [ | 96.64 | |
| d1e3ja2 | 170 | Ketose reductase (sorbitol dehydrogenase) {Silverl | 96.62 | |
| d3cuma2 | 162 | Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru | 96.57 | |
| d2g17a1 | 179 | N-acetyl-gamma-glutamyl-phosphate reductase ArgC { | 96.46 | |
| d1ldna1 | 148 | Lactate dehydrogenase {Bacillus stearothermophilus | 96.46 | |
| d1p77a1 | 171 | Shikimate 5-dehydrogenase AroE {Haemophilus influe | 96.43 | |
| d1npya1 | 167 | Shikimate 5-dehydrogenase-like protein HI0607 {Hae | 96.42 | |
| d1i0za1 | 160 | Lactate dehydrogenase {Human (Homo sapiens), heart | 96.36 | |
| d1hyha1 | 146 | L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La | 96.34 | |
| d2jhfa2 | 176 | Alcohol dehydrogenase {Horse (Equus caballus) [Tax | 96.26 | |
| d1y6ja1 | 142 | Lactate dehydrogenase {Clostridium thermocellum [T | 96.24 | |
| d1jvba2 | 170 | Alcohol dehydrogenase {Archaeon Sulfolobus solfata | 96.23 | |
| d1llua2 | 166 | Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax | 96.23 | |
| d1uxja1 | 142 | Malate dehydrogenase {Chloroflexus aurantiacus [Ta | 96.19 | |
| d1d1ta2 | 176 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 96.19 | |
| d1pl8a2 | 171 | Ketose reductase (sorbitol dehydrogenase) {Human ( | 96.11 | |
| d1qp8a1 | 181 | Putative formate dehydrogenase {Archaeon Pyrobacul | 96.09 | |
| d2pgda2 | 176 | 6-phosphogluconate dehydrogenase {Sheep (Ovis orie | 96.03 | |
| d1ebda2 | 117 | Dihydrolipoamide dehydrogenase {Bacillus stearothe | 96.01 | |
| d2ldxa1 | 159 | Lactate dehydrogenase {Mouse (Mus musculus) [TaxId | 95.96 | |
| d1vm6a3 | 128 | Dihydrodipicolinate reductase {Thermotoga maritima | 95.93 | |
| d1j4aa1 | 197 | D-lactate dehydrogenase {Lactobacillus helveticus | 95.93 | |
| d1a5za1 | 140 | Lactate dehydrogenase {Thermotoga maritima [TaxId: | 95.91 | |
| d1pjca1 | 168 | L-alanine dehydrogenase {Phormidium lapideum [TaxI | 95.9 | |
| d1jqba2 | 174 | Bacterial secondary alcohol dehydrogenase {Clostri | 95.9 | |
| d2cvoa1 | 183 | Putative semialdehyde dehydrogenase {Rice (Oryza s | 95.89 | |
| d1o6za1 | 142 | Malate dehydrogenase {Archaeon Haloarcula marismor | 95.83 | |
| d3lada2 | 119 | Dihydrolipoamide dehydrogenase {Azotobacter vinela | 95.83 | |
| d1guza1 | 142 | Malate dehydrogenase {Chlorobium vibrioforme [TaxI | 95.82 | |
| d1ojua1 | 142 | Malate dehydrogenase {Archaeon Archaeoglobus fulgi | 95.82 | |
| d2g5ca2 | 171 | Prephenate dehydrogenase TyrA {Aquifex aeolicus [T | 95.8 | |
| d1rjwa2 | 168 | Alcohol dehydrogenase {Bacillus stearothermophilus | 95.79 | |
| d1h6va2 | 122 | Mammalian thioredoxin reductase {Rat (Rattus norve | 95.74 | |
| d1e3ia2 | 174 | Alcohol dehydrogenase {Mouse (Mus musculus), class | 95.72 | |
| d7mdha1 | 175 | Malate dehydrogenase {Sorghum (Sorghum vulgare), c | 95.71 | |
| d1mx3a1 | 193 | Transcription corepressor CtbP {Human (Homo sapien | 95.66 | |
| d1pzga1 | 154 | Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5 | 95.65 | |
| d1d7ya2 | 121 | NADH-dependent ferredoxin reductase, BphA4 {Pseudo | 95.65 | |
| d1v59a2 | 122 | Dihydrolipoamide dehydrogenase {Baker's yeast (Sac | 95.64 | |
| d2gz1a1 | 154 | Aspartate beta-semialdehyde dehydrogenase {Strepto | 95.64 | |
| d2cmda1 | 145 | Malate dehydrogenase {Escherichia coli [TaxId: 562 | 95.63 | |
| d1li4a1 | 163 | S-adenosylhomocystein hydrolase {Human (Homo sapie | 95.63 | |
| d1f0ya2 | 192 | Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum | 95.62 | |
| d1nhpa2 | 123 | NADH peroxidase {Enterococcus faecalis [TaxId: 135 | 95.59 | |
| d1yl7a1 | 135 | Dihydrodipicolinate reductase {Mycobacterium tuber | 95.58 | |
| d1y7ta1 | 154 | Malate dehydrogenase {Thermus thermophilus [TaxId: | 95.56 | |
| d1p0fa2 | 174 | Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: | 95.5 | |
| d1gesa2 | 116 | Glutathione reductase {Escherichia coli [TaxId: 56 | 95.38 | |
| d1onfa2 | 117 | Glutathione reductase {Plasmodium falciparum [TaxI | 95.35 | |
| d1llda1 | 143 | Lactate dehydrogenase {Bifidobacterium longum, str | 95.35 | |
| d1ygya1 | 184 | Phosphoglycerate dehydrogenase {Mycobacterium tube | 95.33 | |
| d1lvla2 | 115 | Dihydrolipoamide dehydrogenase {Pseudomonas putida | 95.28 | |
| d2fzwa2 | 176 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 95.27 | |
| d1gu7a2 | 189 | 2,4-dienoyl-CoA reductase {Yeast (Candida tropical | 95.25 | |
| d1dxya1 | 199 | D-2-hydroxyisocaproate dehydrogenase {Lactobacillu | 95.23 | |
| d3grsa2 | 125 | Glutathione reductase {Human (Homo sapiens) [TaxId | 95.22 | |
| d2czca2 | 172 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 95.13 | |
| d1pgja2 | 178 | 6-phosphogluconate dehydrogenase {Trypanosoma bruc | 95.11 | |
| d1gdha1 | 191 | D-glycerate dehydrogenase {Hyphomicrobium methylov | 95.09 | |
| d1xhca2 | 122 | NADH oxidase /nitrite reductase {Pyrococcus furios | 95.04 | |
| d1dxla2 | 123 | Dihydrolipoamide dehydrogenase {Garden pea (Pisum | 95.01 | |
| d1v8ba1 | 163 | S-adenosylhomocystein hydrolase {Plasmodium falcip | 94.96 | |
| d2naca1 | 188 | Formate dehydrogenase {Pseudomonas sp., strain 101 | 94.94 | |
| d2dt5a2 | 126 | Transcriptional repressor Rex, C-terminal domain { | 94.85 | |
| d1mo9a2 | 121 | NADH-dependent 2-ketopropyl coenzyme M oxidoreduct | 94.83 | |
| d1yovb1 | 426 | UBA3 {Human (Homo sapiens) [TaxId: 9606]} | 94.79 | |
| d1q1ra2 | 133 | Putidaredoxin reductase {Pseudomonas putida [TaxId | 94.75 | |
| d1t2da1 | 150 | Lactate dehydrogenase {Malaria parasite (Plasmodiu | 94.68 | |
| d1c0pa1 | 268 | D-aminoacid oxidase, N-terminal domain {Rhodotorul | 94.64 | |
| d1ps9a3 | 179 | 2,4-dienoyl-CoA reductase, middle domain {Escheric | 94.61 | |
| d2csua1 | 129 | Acetate-CoA ligase alpha chain, AcdA, N-terminal d | 94.59 | |
| d5mdha1 | 154 | Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 | 94.51 | |
| d1ojta2 | 125 | Dihydrolipoamide dehydrogenase {Neisseria meningit | 94.5 | |
| d1wdka3 | 186 | Fatty oxidation complex alpha subunit, middle doma | 94.5 | |
| d1sc6a1 | 188 | Phosphoglycerate dehydrogenase {Escherichia coli [ | 94.42 | |
| d1nvta1 | 177 | Shikimate 5-dehydrogenase AroE {Archaeon Methanoco | 94.36 | |
| d1f8fa2 | 174 | Benzyl alcohol dehydrogenase {Acinetobacter calcoa | 94.26 | |
| d1p3da1 | 96 | UDP-N-acetylmuramate-alanine ligase MurC {Haemophi | 94.2 | |
| d1l7da1 | 183 | Nicotinamide nucleotide transhydrogenase dI compon | 94.15 | |
| d1jw9b_ | 247 | Molybdenum cofactor biosynthesis protein MoeB {Esc | 94.12 | |
| d1kyqa1 | 150 | Bifunctional dehydrogenase/ferrochelatase Met8p, N | 94.12 | |
| d1h2ba2 | 172 | Alcohol dehydrogenase {Archaeon Aeropyrum pernix [ | 94.05 | |
| d1b7go1 | 178 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 94.04 | |
| d1cdoa2 | 175 | Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI | 93.87 | |
| d2d59a1 | 139 | Hypothetical protein PH1109 {Pyrococcus horikoshii | 93.81 | |
| d1y81a1 | 116 | Hypothetical protein PF0725 {Pyrococcus furiosus [ | 93.81 | |
| d1kola2 | 195 | Formaldehyde dehydrogenase {Pseudomonas putida [Ta | 93.76 | |
| d1gtea4 | 196 | Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su | 93.71 | |
| d1diha1 | 162 | Dihydrodipicolinate reductase {Escherichia coli [T | 93.44 | |
| d1c1da1 | 201 | Phenylalanine dehydrogenase {Rhodococcus sp., M4 [ | 93.43 | |
| d1djqa2 | 156 | Trimethylamine dehydrogenase, C-terminal domain {M | 93.27 | |
| d2voua1 | 265 | Dihydroxypyridine hydroxylase DhpH {Arthrobacter n | 93.25 | |
| d1hwxa1 | 293 | Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: | 93.16 | |
| d1seza1 | 373 | Protoporphyrinogen oxidase {Tobacco (Nicotiana tab | 93.15 | |
| d1dlja2 | 196 | UDP-glucose dehydrogenase (UDPGDH) {Streptococcus | 93.06 | |
| d1fcda1 | 186 | Flavocytochrome c sulfide dehydrogenase, FCSD, fla | 93.01 | |
| d1f06a1 | 170 | Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb | 92.94 | |
| d1djqa3 | 233 | Trimethylamine dehydrogenase, middle domain {Methy | 92.91 | |
| d3etja2 | 78 | N5-carboxyaminoimidazole ribonucleotide synthetase | 92.86 | |
| d1j6ua1 | 89 | UDP-N-acetylmuramate-alanine ligase MurC {Thermoto | 92.55 | |
| d1cf2o1 | 171 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 92.41 | |
| d2bi7a1 | 314 | UDP-galactopyranose mutase, N-terminal domain {Kle | 92.36 | |
| d1r0ka2 | 150 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z | 92.2 | |
| d1ryia1 | 276 | Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]} | 91.9 | |
| d1q1ra1 | 185 | Putidaredoxin reductase {Pseudomonas putida [TaxId | 91.86 | |
| d1edza1 | 171 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 91.82 | |
| d2iida1 | 370 | L-aminoacid oxidase {Malayan pit viper (Calloselas | 91.58 | |
| d1feca2 | 117 | Trypanothione reductase {Crithidia fasciculata [Ta | 91.25 | |
| d1q0qa2 | 151 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase {E | 91.24 | |
| d2ivda1 | 347 | Protoporphyrinogen oxidase {Myxococcus xanthus [Ta | 91.21 | |
| d2i76a2 | 153 | Hypothetical protein TM1727 {Thermotoga maritima [ | 91.15 | |
| d1k0ia1 | 292 | p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a | 90.95 | |
| d1aoga2 | 117 | Trypanothione reductase {Trypanosoma cruzi [TaxId: | 90.93 | |
| d1vjta1 | 193 | Putative alpha-glucosidase TM0752 {Thermotoga mari | 90.84 | |
| d2dw4a2 | 449 | Lysine-specific histone demethylase 1, LSD1 {Human | 90.71 | |
| d1iuka_ | 136 | Hypothetical protein TT1466 {Thermus thermophilus | 90.67 | |
| d2g82a1 | 168 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 90.3 | |
| d1d7ya1 | 183 | NADH-dependent ferredoxin reductase, BphA4 {Pseudo | 90.21 | |
| d1a9xa4 | 121 | Carbamoyl phosphate synthetase (CPS), large subuni | 90.11 | |
| d1obba1 | 171 | Alpha-glucosidase AglA {Thermotoga maritima [TaxId | 89.57 | |
| d2bcgg1 | 297 | Guanine nucleotide dissociation inhibitor, GDI {Ba | 89.02 | |
| d1pj5a2 | 305 | N,N-dimethylglycine oxidase {Arthrobacter globifor | 89.02 | |
| d1a4ia1 | 170 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 88.8 | |
| d2gf3a1 | 281 | Sarcosine oxidase {Bacillus sp., strain b0618 [Tax | 88.72 | |
| d1m6ia2 | 137 | Apoptosis-inducing factor (AIF) {Human (Homo sapie | 88.52 | |
| d1b0aa1 | 166 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 88.47 | |
| d1kifa1 | 246 | D-aminoacid oxidase, N-terminal domain {Pig (Sus s | 88.45 | |
| d1xhca1 | 167 | NADH oxidase /nitrite reductase {Pyrococcus furios | 88.37 | |
| d1tlta1 | 164 | Virulence factor MviM {Escherichia coli [TaxId: 56 | 88.19 | |
| d1yova1 | 529 | Amyloid beta precursor protein-binding protein 1, | 88.03 | |
| d1nhpa1 | 198 | NADH peroxidase {Enterococcus faecalis [TaxId: 135 | 87.95 | |
| d2gv8a1 | 335 | Flavin-dependent monoxygenase SPBP16F5.08c {Schizo | 87.41 | |
| d1nvmb1 | 157 | Acetaldehyde dehydrogenase (acylating) {Pseudomona | 86.73 | |
| d1b5qa1 | 347 | Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]} | 86.63 | |
| d1i8ta1 | 298 | UDP-galactopyranose mutase, N-terminal domain {Esc | 86.4 | |
| d1d5ta1 | 336 | Guanine nucleotide dissociation inhibitor, GDI {Co | 85.69 | |
| d1m6ya2 | 192 | TM0872, methyltransferase domain {Thermotoga marit | 85.67 | |
| d1ydwa1 | 184 | Probable oxidoreductase At4g09670 {Thale cress (Ar | 85.66 | |
| d1v9la1 | 242 | Glutamate dehydrogenase {Pyrobaculum islandicum [T | 85.56 | |
| d1k3ta1 | 190 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 85.24 | |
| d1zh8a1 | 181 | Hypothetical protein TM0312 {Thermotoga maritima [ | 85.22 | |
| d1a9xa3 | 127 | Carbamoyl phosphate synthetase (CPS), large subuni | 85.2 | |
| d3c96a1 | 288 | Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: | 85.08 | |
| d1u0sy_ | 118 | CheY protein {Thermotoga maritima [TaxId: 2336]} | 84.8 | |
| d2nu7a1 | 119 | Succinyl-CoA synthetase, alpha-chain, N-terminal ( | 84.72 | |
| d2vapa1 | 209 | Cell-division protein FtsZ {Archaeon Methanococcus | 84.54 | |
| d1xeaa1 | 167 | Putative oxidoreductase VCA1048 {Vibrio cholerae [ | 84.21 | |
| d1w5fa1 | 194 | Cell-division protein FtsZ {Thermotoga maritima [T | 84.17 | |
| d1dssg1 | 169 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 83.86 | |
| d1leha1 | 230 | Leucine dehydrogenase {Bacillus sphaericus [TaxId: | 83.84 | |
| d1gtea3 | 153 | Dihydropyrimidine dehydrogenase, domain 3 {Pig (Su | 83.8 | |
| d1up7a1 | 162 | 6-phospho-beta-glucosidase {Thermotoga maritima [T | 83.57 | |
| d2v5za1 | 383 | Monoamine oxidase B {Human (Homo sapiens) [TaxId: | 83.21 | |
| d2i0za1 | 251 | Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396] | 82.72 | |
| d1bgva1 | 255 | Glutamate dehydrogenase {Clostridium symbiosum [Ta | 82.38 | |
| d1gado1 | 166 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 82.22 | |
| d2csua3 | 163 | Acetate-CoA ligase alpha chain, AcdA, domains 2 an | 82.1 | |
| d2gv8a2 | 107 | Flavin-dependent monoxygenase SPBP16F5.08c {Schizo | 81.79 | |
| d1w4xa1 | 298 | Phenylacetone monooxygenase {Thermobifida fusca [T | 81.73 | |
| d2blna2 | 203 | Polymyxin resistance protein ArnA, N-terminal doma | 81.53 | |
| d1hdgo1 | 169 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 81.16 | |
| d1h6da1 | 221 | Glucose-fructose oxidoreductase, N-terminal domain | 81.03 | |
| d1u8xx1 | 167 | Maltose-6'-phosphate glucosidase GlvA {Bacillus su | 80.24 | |
| d1np3a2 | 182 | Class I ketol-acid reductoisomerase (KARI) {Pseudo | 80.08 |
| >d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Biliverdin IX beta reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=1.3e-29 Score=217.94 Aligned_cols=187 Identities=13% Similarity=0.116 Sum_probs=156.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcCCc----
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG---- 173 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~g---- 173 (306)
.+++|+||||||+||++++++|+++|++|++++|++++.......+++++.+|+.|.+++.++++++|+||++.+.
T Consensus 2 ~~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~gD~~d~~~l~~al~~~d~vi~~~g~~~~~ 81 (205)
T d1hdoa_ 2 AVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAADVDKTVAGQDAVIVLLGTRNDL 81 (205)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSSCCCSEEEESCTTSHHHHHHHHTTCSEEEECCCCTTCC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhcccccccccccccccccchhhHHHHhcCCCEEEEEeccCCch
Confidence 4789999999999999999999999999999999999876666678999999999999999999999999998331
Q ss_pred -----------hhhhcccccCCCEEEEecCcccccCCCCcccccchHHHHHHHHHHHHHHhcCCCEEEEEcCcccCCCCC
Q 021854 174 -----------FISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMASGIPYTIIRTGVLQNTPGG 242 (306)
Q Consensus 174 -----------~~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~ 242 (306)
.+.+++++++++|||++||..++.......... ..+...+..+|+++++++++||+|||+++.+.+..
T Consensus 82 ~~~~~~~~~~~~l~~aa~~~~v~r~i~~ss~~~~~~~~~~~~~~-~~~~~~~~~~e~~l~~~~~~~tiirp~~~~~~~~~ 160 (205)
T d1hdoa_ 82 SPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTKVPPRL-QAVTDDHIRMHKVLRESGLKYVAVMPPHIGDQPLT 160 (205)
T ss_dssp SCCCHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCTTCSCGGG-HHHHHHHHHHHHHHHHTCSEEEEECCSEEECCCCC
T ss_pred hhhhhhHHHHHHHHHHHHhcCCCeEEEEeeeeccCCCccccccc-cccchHHHHHHHHHHhcCCceEEEecceecCCCCc
Confidence 156678889999999999988765544333222 23455677889999999999999999999877766
Q ss_pred CcceeeecCCCCccccCHHHHHHHHHHHhhCCCCCCcEEEEec
Q 021854 243 KQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVVN 285 (306)
Q Consensus 243 ~~~~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~~~g~~~~v~~ 285 (306)
+.......+.....+|+++|+|++++.+++++...|+.+.+..
T Consensus 161 ~~~~~~~~~~~~~~~i~~~DvA~~~~~~l~~~~~~g~~~~~s~ 203 (205)
T d1hdoa_ 161 GAYTVTLDGRGPSRVISKHDLGHFMLRCLTTDEYDGHSTYPSH 203 (205)
T ss_dssp SCCEEESSSCSSCSEEEHHHHHHHHHHTTSCSTTTTCEEEEEC
T ss_pred ccEEEeeCCCCCCCcCCHHHHHHHHHHHhCCCCCCCEEEecCC
Confidence 6655555667778889999999999999999988898887763
|
| >d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein At5g02240 (T7H20 290) species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.93 E-value=5.1e-25 Score=189.64 Aligned_cols=204 Identities=23% Similarity=0.381 Sum_probs=156.0
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCe--EEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcCCch--
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKRTR--IKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEGF-- 174 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g~~--V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~g~-- 174 (306)
+++||||||||+||++++++|+++|++ |+.++|++++... ...+++++.+|+.|.+.+.++++++|+|||+++..
T Consensus 3 ~~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~-~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~~~ 81 (252)
T d2q46a1 3 LPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEK-IGGEADVFIGDITDADSINPAFQGIDALVILTSAVPK 81 (252)
T ss_dssp CCEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHH-TTCCTTEEECCTTSHHHHHHHHTTCSEEEECCCCCCE
T ss_pred CCEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHh-ccCCcEEEEeeeccccccccccccceeeEEEEeeccc
Confidence 689999999999999999999999964 6678888877543 34579999999999999999999999999983210
Q ss_pred ---------------------------------hhhcccccCCCEEEEecCcccccCCCCcccccchHHHHHHHHHHHHH
Q 021854 175 ---------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESML 221 (306)
Q Consensus 175 ---------------------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~~~~~aE~~l 221 (306)
+...+.....+++.+.|+...+.+..+...+....+...+...+.+.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (252)
T d2q46a1 82 MKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGSMGGTNPDHPLNKLGNGNILVWKRKAEQYL 161 (252)
T ss_dssp ECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEETTTTCTTCGGGGGGGCCHHHHHHHHHHHH
T ss_pred cccccchhhhhhcccccccchhhhccccccceeeccccccccccccccccccccCCCCcccccccccchhhhhhhhhhhh
Confidence 11223456788999999888776655554444444444555667777
Q ss_pred HhcCCCEEEEEcCcccCCCCCCcceeeec----CCCCccccCHHHHHHHHHHHhhCCCCCCcEEEEecCC----cCHHHH
Q 021854 222 MASGIPYTIIRTGVLQNTPGGKQGFQFEE----GCAANGSLSKEDAAFICVEALESIPQTGLIFEVVNGE----EKVSDW 293 (306)
Q Consensus 222 ~~sgi~~tiiRPg~l~~~~~~~~~~~~~~----g~~~~~~Is~~DVA~~iv~aL~~~~~~g~~~~v~~g~----~s~~d~ 293 (306)
..++++++++||+++.+............ .....++|+++|||++++.+|+++...|++|++++++ .++++|
T Consensus 162 ~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~a~~~~l~~~~~~g~~~~i~~~~~~~~~~~~~~ 241 (252)
T d2q46a1 162 ADSGTPYTIIRAGGLLDKEGGVRELLVGKDDELLQTDTKTVPRADVAEVCIQALLFEEAKNKAFDLGSKPEGTSTPTKDF 241 (252)
T ss_dssp HHSSSCEEEEEECEEECSCTTSSCEEEESTTGGGGSSCCEEEHHHHHHHHHHHTTCGGGTTEEEEEEECCTTTSCCCCCH
T ss_pred hcccccceeecceEEECCCcchhhhhhccCcccccCCCCeEEHHHHHHHHHHHhCCccccCcEEEEeeCCCCCChhHHHH
Confidence 88999999999999775554333333322 2333678999999999999999998889999999854 257899
Q ss_pred HHHHHHHhhh
Q 021854 294 KKCFSRLMEK 303 (306)
Q Consensus 294 ~~l~~~l~~~ 303 (306)
.++|+++.++
T Consensus 242 ~~lf~~i~~r 251 (252)
T d2q46a1 242 KALFSQVTSR 251 (252)
T ss_dssp HHHHTTCCCC
T ss_pred HHHHHHHHhc
Confidence 9999887654
|
| >d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Pinoresinol-lariciresinol reductase species: Giant arborvitae (Thuja plicata) [TaxId: 3316]
Probab=99.90 E-value=2.8e-23 Score=186.03 Aligned_cols=207 Identities=13% Similarity=0.113 Sum_probs=154.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchh--------hhhcCCCceeeeccCCCHHHHHHHhcCccEEEE
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA--------MESFGTYVESMAGDASNKKFLKTALRGVRSIIC 169 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~--------~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~ 169 (306)
.++|||||||||+||++++++|+++|++|++++|+.... ......+++++.+|+.|.+.+..++++++++++
T Consensus 2 ~k~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~~v~~v~~d~~d~~~~~~~~~~~~~~~~ 81 (312)
T d1qyda_ 2 KKSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQVDVVIS 81 (312)
T ss_dssp CCCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTCSEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhhccCCcEEEEeecccchhhhhhccCcchhhh
Confidence 467899999999999999999999999999999987541 122345799999999999999999999999998
Q ss_pred cCCc-----------hhhhcccccCCCEEEEecCcccccCCCCcccccchHHHHHHHHHHHHHHhcCCCEEEEEcCcccC
Q 021854 170 PSEG-----------FISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMASGIPYTIIRTGVLQN 238 (306)
Q Consensus 170 ~~~g-----------~~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~~~~~aE~~l~~sgi~~tiiRPg~l~~ 238 (306)
+.+. ...+++.+.+..++|+.||.+.+.................+..++.+..+.+++++++||+.+.+
T Consensus 82 ~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~Ss~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~~~~g 161 (312)
T d1qyda_ 82 ALAGGVLSHHILEQLKLVEAIKEAGNIKRFLPSEFGMDPDIMEHALQPGSITFIDKRKVRRAIEAASIPYTYVSSNMFAG 161 (312)
T ss_dssp CCCCSSSSTTTTTHHHHHHHHHHSCCCSEEECSCCSSCTTSCCCCCSSTTHHHHHHHHHHHHHHHTTCCBCEEECCEEHH
T ss_pred hhhhcccccchhhhhHHHHHHHHhcCCcEEEEeeccccCCCcccccchhhhhhHHHHHHHHhhcccccceEEeccceeec
Confidence 7321 14456677777778888887766543322222222334456677888889999999999998542
Q ss_pred C---C----------CCCcceeeecCCCCccccCHHHHHHHHHHHhhCCCCCCcEE-EEecCC-cCHHHHHHHHHHHhhh
Q 021854 239 T---P----------GGKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIF-EVVNGE-EKVSDWKKCFSRLMEK 303 (306)
Q Consensus 239 ~---~----------~~~~~~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~~~g~~~-~v~~g~-~s~~d~~~l~~~l~~~ 303 (306)
. . .......++.++....+|+++|+|++++.++.++...++++ ++.+++ .++.++.+.+.++.++
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~ 241 (312)
T d1qyda_ 162 YFAGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQTLNKTMYIRPPMNILSQKEVIQIWERLSEQ 241 (312)
T ss_dssp HHTTTSSCTTCCSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHHTTCGGGSSSEEECCCGGGEEEHHHHHHHHHHHHTC
T ss_pred CCccchhhHHHHhhhcccccccccccccccceeeHHHHHHHHHHHhcCccccCceEEEeCCCcCCCHHHHHHHHHHHHCC
Confidence 1 0 01222234566677889999999999999999988777765 454444 4899999999988766
Q ss_pred c
Q 021854 304 T 304 (306)
Q Consensus 304 ~ 304 (306)
+
T Consensus 242 ~ 242 (312)
T d1qyda_ 242 N 242 (312)
T ss_dssp C
T ss_pred C
Confidence 4
|
| >d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose-3', 5'-epimerase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.89 E-value=7e-22 Score=182.34 Aligned_cols=205 Identities=12% Similarity=0.019 Sum_probs=150.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcCCch---
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEGF--- 174 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~g~--- 174 (306)
++|+||||||+||||++|+++|+++|++|+++.|.............++..+|+.|.+.+.++++++|+|||+++..
T Consensus 14 ~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~Vih~a~~~~~~ 93 (363)
T d2c5aa1 14 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMFCDEFHLVDLRVMENCLKVTEGVDHVFNLAADMGGM 93 (363)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGGGTCSEEEECCTTSHHHHHHHHTTCSEEEECCCCCCCH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccchhhhcccCcEEEeechhHHHHHHHhhcCCeEeecccccccc
Confidence 67899999999999999999999999999999876544222222456888999999999999999999999984210
Q ss_pred --------------------hhhcccccCCCEEEEecCcccccCCCCc------------cccc-chHHHHHHHHHHHHH
Q 021854 175 --------------------ISNAGSLKGVQHVILLSQLSVYRGSGGI------------QALM-KGNARKLAEQDESML 221 (306)
Q Consensus 175 --------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~------------~~~~-~~~a~~~~~~aE~~l 221 (306)
+.+++.+.+++|||++||..++...... .... ...+...|..+|.++
T Consensus 94 ~~~~~~~~~~~~~n~~gt~~ll~~~~~~~vk~~i~~SS~~~~~~~~~~~~~~~~~~~~e~~~~~p~~~Yg~sK~~~E~~~ 173 (363)
T d2c5aa1 94 GFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAFGLEKLATEELC 173 (363)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSSBCCSSHHHHHHHHHHHHH
T ss_pred cccccccccccccccchhhHHHHhHHhhCccccccccccccccccccccccccccccccCCcCCCCCHHHHHHHHHHHHH
Confidence 4556778999999999999887631110 0000 112333455666655
Q ss_pred H----hcCCCEEEEEcCcccCCCC--------------------CCcceeeecCCCCccccCHHHHHHHHHHHhhCCCCC
Q 021854 222 M----ASGIPYTIIRTGVLQNTPG--------------------GKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQT 277 (306)
Q Consensus 222 ~----~sgi~~tiiRPg~l~~~~~--------------------~~~~~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~~~ 277 (306)
+ ..+++++++||+.+..... ......++.|.....+++.+|+++++..+++.+ .
T Consensus 174 ~~~~~~~gl~~~ilR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v~D~~~~~~~~~~~~--~ 251 (363)
T d2c5aa1 174 KHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLTKSD--F 251 (363)
T ss_dssp HHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEECCEEHHHHHHHHHHHHHSS--C
T ss_pred HHHHHHhCCCEEEEEeeeEeccCCcccccccccccccccccccccccccccCCCCeEEEEeehhHHHHHHHHHHhCC--C
Confidence 4 4699999999988543211 112223345566678999999999999988764 3
Q ss_pred CcEEEEecCC-cCHHHHHHHHHHHhhhc
Q 021854 278 GLIFEVVNGE-EKVSDWKKCFSRLMEKT 304 (306)
Q Consensus 278 g~~~~v~~g~-~s~~d~~~l~~~l~~~~ 304 (306)
+.+|+++++. .++.++.+++.++.++.
T Consensus 252 ~~~~ni~~~~~~s~~~l~~~i~~~~g~~ 279 (363)
T d2c5aa1 252 REPVNIGSDEMVSMNEMAEMVLSFEEKK 279 (363)
T ss_dssp CSCEEECCCCCEEHHHHHHHHHHTTTCC
T ss_pred CCeEEEecCCcccHHHHHHHHHHHhCCC
Confidence 5689999876 48999999998887653
|
| >d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: TAT-interacting protein TIP30 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.88 E-value=1.1e-22 Score=177.42 Aligned_cols=182 Identities=14% Similarity=0.140 Sum_probs=137.8
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCC--eEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcCCc
Q 021854 96 EEARDAVLVTDGDSDIGQMVILSLIVKRT--RIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG 173 (306)
Q Consensus 96 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~--~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~g 173 (306)
.+++++||||||||+||++++++|+++|. +|++++|++.+.......++++..+|+.+.+++.++++++|++||+++.
T Consensus 11 ~m~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~~~~~i~~~~~D~~~~~~~~~~~~~~d~vi~~~~~ 90 (232)
T d2bkaa1 11 RMQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKLDDYASAFQGHDVGFCCLGT 90 (232)
T ss_dssp HHTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGGGCEEEECCGGGGGGGGGGGSSCSEEEECCCC
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcccccceeeeeeecccccccccccccccccccccccc
Confidence 34678999999999999999999999994 8999999886644444457888899999999999999999999998442
Q ss_pred h-------------------hhhcccccCCCEEEEecCcccccCCCCcccccchHHHHHHHHHHHHHHhcCCC-EEEEEc
Q 021854 174 F-------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMASGIP-YTIIRT 233 (306)
Q Consensus 174 ~-------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~~~~~aE~~l~~sgi~-~tiiRP 233 (306)
. +.++|.+.++++||++|+..++..... .| ...|..+|.++.+.+++ ++|+||
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~v~~fi~~Ss~~~~~~~~~--~Y-----~~~K~~~E~~l~~~~~~~~~IlRP 163 (232)
T d2bkaa1 91 TRGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADKSSNF--LY-----LQVKGEVEAKVEELKFDRYSVFRP 163 (232)
T ss_dssp CHHHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTTCSS--HH-----HHHHHHHHHHHHTTCCSEEEEEEC
T ss_pred cccccchhhhhhhcccccceeeecccccCccccccCCccccccCccc--hh-----HHHHHHhhhccccccccceEEecC
Confidence 1 456678899999999999988765433 23 33467789999998886 999999
Q ss_pred CcccCCCCCCcc-------e--eeecCCCCccccCHHHHHHHHHHHhhCCCCCCcEEEEec
Q 021854 234 GVLQNTPGGKQG-------F--QFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVVN 285 (306)
Q Consensus 234 g~l~~~~~~~~~-------~--~~~~g~~~~~~Is~~DVA~~iv~aL~~~~~~g~~~~v~~ 285 (306)
|.+......... + .++........|+++|+|++++.++.++.. ++.+.+.+
T Consensus 164 ~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~~dvA~a~i~~~~~~~~-~~~~i~~~ 223 (232)
T d2bkaa1 164 GVLLCDRQESRPGEWLVRKFFGSLPDSWASGHSVPVVTVVRAMLNNVVRPRD-KQMELLEN 223 (232)
T ss_dssp CEEECTTGGGSHHHHHHHHHHCSCCTTGGGGTEEEHHHHHHHHHHHHTSCCC-SSEEEEEH
T ss_pred ceeecCCCcCcHHHHHHHHHhhccCCcccCCCeEEHHHHHHHHHHHHhcCcc-CCeEEEcH
Confidence 996643321110 0 011222234579999999999999987765 45666654
|
| >d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Phenylcoumaran benzylic ether reductase species: Loblolly pine (Pinus taeda) [TaxId: 3352]
Probab=99.88 E-value=7.2e-22 Score=175.30 Aligned_cols=206 Identities=15% Similarity=0.153 Sum_probs=154.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchh---------hhhcCCCceeeeccCCCHHHHHHHhcCccEEE
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA---------MESFGTYVESMAGDASNKKFLKTALRGVRSII 168 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~---------~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi 168 (306)
.+||||||||||+||++++++|+++|++|++++|+.... ......+++++.+|+.+...+...+++++.++
T Consensus 2 ~kkKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~vi 81 (307)
T d1qyca_ 2 SRSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKNVDVVI 81 (307)
T ss_dssp CCCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHTCSEEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhhccCCcEEEEeecccchhhhhhhhhceeee
Confidence 468999999999999999999999999999999987652 12234578999999999999999999999999
Q ss_pred EcCCch-------hhhcccccCCCEEEEecCcccccCCCCcccccchHHHHHHHHHHHHHHhcCCCEEEEEcCcccCC--
Q 021854 169 CPSEGF-------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMASGIPYTIIRTGVLQNT-- 239 (306)
Q Consensus 169 ~~~~g~-------~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~~~~~aE~~l~~sgi~~tiiRPg~l~~~-- 239 (306)
+..+.. +.+++...+++++++.|+............+.. .....+...+.++.+.+++++++||+.+.+.
T Consensus 82 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~~s~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~r~~~v~g~~~ 160 (307)
T d1qyca_ 82 STVGSLQIESQVNIIKAIKEVGTVKRFFPSEFGNDVDNVHAVEPAK-SVFEVKAKVRRAIEAEGIPYTYVSSNCFAGYFL 160 (307)
T ss_dssp ECCCGGGSGGGHHHHHHHHHHCCCSEEECSCCSSCTTSCCCCTTHH-HHHHHHHHHHHHHHHHTCCBEEEECCEEHHHHT
T ss_pred ecccccccchhhHHHHHHHHhccccceeeecccccccccccccccc-ccccccccccchhhccCCCceecccceecCCCc
Confidence 884422 456677888999999988765543333222211 2233445677888899999999999985411
Q ss_pred --C--------CCCcceeeecCCCCccccCHHHHHHHHHHHhhCCCCCCcEEE-EecCC-cCHHHHHHHHHHHhhhc
Q 021854 240 --P--------GGKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFE-VVNGE-EKVSDWKKCFSRLMEKT 304 (306)
Q Consensus 240 --~--------~~~~~~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~~~g~~~~-v~~g~-~s~~d~~~l~~~l~~~~ 304 (306)
. .......++.++....+++++|+|++++.+++++...++.+. +++++ .++.|+.+++.++.++.
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~~~~~~~~~s~~ei~~~~~~~~G~~ 237 (307)
T d1qyca_ 161 RSLAQAGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDPRTLNKTLYLRLPANTLSLNELVALWEKKIDKT 237 (307)
T ss_dssp TTTTCTTCSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTSSCGGGTTEEEECCCGGGEEEHHHHHHHHHHHTTSC
T ss_pred cchhhhhhhhhhcccceeeecccccccCCcHHHHHHHHHHHhcChhhcCceeEEeCCCCccCHHHHHHHHHHHHCCC
Confidence 0 011223345667778999999999999999998877776655 44444 58999999999987654
|
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Probab=99.87 E-value=1.7e-21 Score=180.15 Aligned_cols=202 Identities=11% Similarity=0.021 Sum_probs=141.5
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcch-----hhh------hcCCCceeeeccCCCHHHHHHHhcCc--c
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-----AME------SFGTYVESMAGDASNKKFLKTALRGV--R 165 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~-----~~~------~~~~~v~~v~~D~~d~~~l~~~~~~~--d 165 (306)
.|.||||||||+||++++++|++.|++|++++|.... ... ....+++++.+|++|.+.++++++++ |
T Consensus 1 ~K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 80 (357)
T d1db3a_ 1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPD 80 (357)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCCS
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHHHHhccCCC
Confidence 3789999999999999999999999999999995432 111 12357899999999999999999866 9
Q ss_pred EEEEcCCc----h------------------hhhcccccCC---CEEEEecCcccccCCCC--c---cccc-chHHHHHH
Q 021854 166 SIICPSEG----F------------------ISNAGSLKGV---QHVILLSQLSVYRGSGG--I---QALM-KGNARKLA 214 (306)
Q Consensus 166 ~vi~~~~g----~------------------~~~~a~~~gv---kr~V~iSS~~~~~~~~~--~---~~~~-~~~a~~~~ 214 (306)
+|||+++- . +.++|++.++ +|||++||..+|..... . .... .+.+...|
T Consensus 81 ~v~h~aa~~~~~~~~~~~~~~~~~Nv~gt~nllea~~~~~~~~~~r~i~~SS~~vYG~~~~~~~~E~~~~~P~~~Y~~sK 160 (357)
T d1db3a_ 81 EVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAK 160 (357)
T ss_dssp EEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCSSSBCTTSCCCCCSHHHHHH
T ss_pred EEEEeecccccchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEEchhhhCCCCCCCcCCCCCCCCCChHHHHH
Confidence 99998331 0 3455666554 47999999988742111 0 0011 12233445
Q ss_pred HHHHHHHH----hcCCCEEEEEcCcccCC-CC------------------CCcceeeecCCCCccccCHHHHHHHHHHHh
Q 021854 215 EQDESMLM----ASGIPYTIIRTGVLQNT-PG------------------GKQGFQFEEGCAANGSLSKEDAAFICVEAL 271 (306)
Q Consensus 215 ~~aE~~l~----~sgi~~tiiRPg~l~~~-~~------------------~~~~~~~~~g~~~~~~Is~~DVA~~iv~aL 271 (306)
..+|.+++ ..+++++++||+.+... .. ....+.++.++....+++++|+|+++..++
T Consensus 161 ~~~E~~~~~~~~~~~l~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~D~~~a~~~~~ 240 (357)
T d1db3a_ 161 LYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQWMML 240 (357)
T ss_dssp HHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEEHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhCCCEEEEEeccccCCCCCcCCCchHHHHHHHHHHhCCCceEEECCCCeeecceeechHHHHHHHHH
Confidence 55666554 46899999999874322 11 112233455666678999999999999988
Q ss_pred hCCCCCCcEEEEecCCc-CHHHHHHHHHHHhh
Q 021854 272 ESIPQTGLIFEVVNGEE-KVSDWKKCFSRLME 302 (306)
Q Consensus 272 ~~~~~~g~~~~v~~g~~-s~~d~~~l~~~l~~ 302 (306)
+.. .+++|++++++. ++.++++++....+
T Consensus 241 ~~~--~~~~yni~sg~~~s~~~~~~~~~~~~g 270 (357)
T d1db3a_ 241 QQE--QPEDFVIATGVQYSVRQFVEMAAAQLG 270 (357)
T ss_dssp SSS--SCCCEEECCCCCEEHHHHHHHHHHTTT
T ss_pred hCC--CCCeEEECCCCceehHHHHHHHHHHhC
Confidence 764 457899998775 89999998887764
|
| >d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Negative transcriptional regulator NmrA species: Aspergillus nidulans [TaxId: 162425]
Probab=99.86 E-value=4.1e-21 Score=176.42 Aligned_cols=204 Identities=15% Similarity=0.153 Sum_probs=150.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhh--hh-cCCCceeeeccCCCH-HHHHHHhcCccEEEEcCCc
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM--ES-FGTYVESMAGDASNK-KFLKTALRGVRSIICPSEG 173 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~--~~-~~~~v~~v~~D~~d~-~~l~~~~~~~d~vi~~~~g 173 (306)
..|+|+||||||+||++++++|+++||+|++++|+.++.. .. ...+++++.+|+.|. +.++.++.++|+++++...
T Consensus 2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~v~~~~gD~~d~~~~~~~a~~~~~~~~~~~~~ 81 (350)
T d1xgka_ 2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPLMDTLFEGAHLAFINTTS 81 (350)
T ss_dssp CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHHTSTTEEEEESCCTTCHHHHHHHHTTCSEEEECCCS
T ss_pred CCCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchhhhhhhcccCCCEEEEeeCCCcHHHHHHHhcCCceEEeeccc
Confidence 4799999999999999999999999999999999987632 22 224799999999884 5578899999999987321
Q ss_pred ----------hhhhcccccCCCEEEEecCcccccCCCCcccccchHHHHHHHHHHHHHHhcCCCEEEEEcCcccCCCC--
Q 021854 174 ----------FISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMASGIPYTIIRTGVLQNTPG-- 241 (306)
Q Consensus 174 ----------~~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~~~~~aE~~l~~sgi~~tiiRPg~l~~~~~-- 241 (306)
.+.+++.++|++++|+.||............. .....+...+.++.+.+++++++||+++.+...
T Consensus 82 ~~~~~~~~~~~~~~aa~~agv~~~v~~Ss~~~~~~~~~~~~~---~~~~~k~~~~~~~~~~~~~~~~vr~~~~~~~~~~~ 158 (350)
T d1xgka_ 82 QAGDEIAIGKDLADAAKRAGTIQHYIYSSMPDHSLYGPWPAV---PMWAPKFTVENYVRQLGLPSTFVYAGIYNNNFTSL 158 (350)
T ss_dssp TTSCHHHHHHHHHHHHHHHSCCSEEEEEECCCGGGTSSCCCC---TTTHHHHHHHHHHHTSSSCEEEEEECEEGGGCBSS
T ss_pred ccchhhhhhhHHHHHHHHhCCCceEEEeeccccccCCcccch---hhhhhHHHHHHHHHhhccCceeeeeceeecccccc
Confidence 16678888999988888887654432222111 112235567888999999999999998653221
Q ss_pred ---------CCcc-eee---ecCCCCccccCH-HHHHHHHHHHhhCCC--CCCcEEEEecCCcCHHHHHHHHHHHhhhc
Q 021854 242 ---------GKQG-FQF---EEGCAANGSLSK-EDAAFICVEALESIP--QTGLIFEVVNGEEKVSDWKKCFSRLMEKT 304 (306)
Q Consensus 242 ---------~~~~-~~~---~~g~~~~~~Is~-~DVA~~iv~aL~~~~--~~g~~~~v~~g~~s~~d~~~l~~~l~~~~ 304 (306)
...+ ..+ ..++....+++. +|+|+++..++.++. ..|+.|+++++..++.|+.++++++++++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Dva~~v~~~l~~~~~~~~G~~~~~~g~~~T~~eia~~l~~~~G~~ 237 (350)
T d1xgka_ 159 PYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQKWNGHRIALTFETLSPVQVCAAFSRALNRR 237 (350)
T ss_dssp SCSSCBEEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHHHCHHHHTTCEEEECSEEECHHHHHHHHHHHHTSC
T ss_pred ccccccccccccccceeeecccCCCcceEEEeHHHHHHHHHHHHhCChhhcCCeEEEEeCCcCCHHHHHHHHHHHHCCc
Confidence 0000 111 134444556765 899999999997643 46899999987779999999999998764
|
| >d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Escherichia coli [TaxId: 562]
Probab=99.85 E-value=1.9e-20 Score=171.30 Aligned_cols=204 Identities=20% Similarity=0.184 Sum_probs=142.7
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcch-------hhhhcCCCceeeeccCCCHHHHHHHhc--CccEEEEc
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-------AMESFGTYVESMAGDASNKKFLKTALR--GVRSIICP 170 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~-------~~~~~~~~v~~v~~D~~d~~~l~~~~~--~~d~vi~~ 170 (306)
|+|||||||||||++|++.|+++|++|++++|-... .......+++++.+|++|.+.+.++++ ++|+|||+
T Consensus 1 MKiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~ViHl 80 (338)
T d1udca_ 1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIHF 80 (338)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHTTCSEEEEC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHhhcCCCCEEEEeecCCHHHHHHHHhccCCCEEEEC
Confidence 679999999999999999999999999999763322 112234589999999999999999998 78999998
Q ss_pred CC--ch--------------------hhhcccccCCCEEEEecCcccccCCCCcc------ccc-chHHHHHHHHHHHHH
Q 021854 171 SE--GF--------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQ------ALM-KGNARKLAEQDESML 221 (306)
Q Consensus 171 ~~--g~--------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~~------~~~-~~~a~~~~~~aE~~l 221 (306)
++ +. +++++++.++++||++||..++....... .+. ...+...|..+|.++
T Consensus 81 Aa~~~~~~~~~~~~~~~~~Nv~gt~nlL~~~~~~~v~~~i~~Ss~~vy~~~~~~~~~e~~~~~~p~~~Y~~sK~~~e~~~ 160 (338)
T d1udca_ 81 AGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQIL 160 (338)
T ss_dssp CSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCCSSSBCTTSCCCCCSSHHHHHHHHHHHHH
T ss_pred CCccchhhHHhCHHHHHHhHHHHHHHHHHHHHHhCCCEEEecCcceEEccccccccccccccCCCcchHHHHHhhhhHHH
Confidence 43 10 45667889999999999999885322110 111 112233344555555
Q ss_pred Hh-----cCCCEEEEEcCcccCC-CC------------------------CCcceee-e------cCCCCccccCHHHHH
Q 021854 222 MA-----SGIPYTIIRTGVLQNT-PG------------------------GKQGFQF-E------EGCAANGSLSKEDAA 264 (306)
Q Consensus 222 ~~-----sgi~~tiiRPg~l~~~-~~------------------------~~~~~~~-~------~g~~~~~~Is~~DVA 264 (306)
.+ .+++++++||+.+... +. ....+.+ + .+.....+++++|++
T Consensus 161 ~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~i~g~~~~~~~g~~~rd~i~v~D~~ 240 (338)
T d1udca_ 161 TDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMDLA 240 (338)
T ss_dssp HHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCSSSTTSSCEECEEEHHHHH
T ss_pred HHHHhhccCCeEEEEeeccEEeccCCCCCCCCccccHHHHHHHHHHHHhcCCCCEEEeCCCcccCCCCceeeEEEEeehh
Confidence 42 5899999999884421 10 0111111 1 123335678999999
Q ss_pred HHHHHHhhC--CCCCCcEEEEecCC-cCHHHHHHHHHHHhhh
Q 021854 265 FICVEALES--IPQTGLIFEVVNGE-EKVSDWKKCFSRLMEK 303 (306)
Q Consensus 265 ~~iv~aL~~--~~~~g~~~~v~~g~-~s~~d~~~l~~~l~~~ 303 (306)
.++..+... ....+++||++++. .++.++.+.+.++.+.
T Consensus 241 ~~~~~~~~~~~~~~~~~i~Ni~~~~~~si~e~~~~i~~~~g~ 282 (338)
T d1udca_ 241 DGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGK 282 (338)
T ss_dssp HHHHHHHHHHTTCCEEEEEEESCSSCEEHHHHHHHHHHHHTS
T ss_pred hhccccccccccccCcceeeecCCCCCcHHHHHHHHHHHHCC
Confidence 888776653 33456899999866 5899999999888754
|
| >d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-glucuronate decarboxylase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.85 E-value=2.5e-21 Score=175.82 Aligned_cols=203 Identities=13% Similarity=0.111 Sum_probs=135.9
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcCCch----
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEGF---- 174 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~g~---- 174 (306)
.|+||||||+|+||++++++|+++|++|++++|......+..........+|+.|.+.++.++.++|+|||+++-.
T Consensus 1 kKKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~VihlAa~~~~~~ 80 (312)
T d2b69a1 1 RKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPLYIEVDQIYHLASPASPPN 80 (312)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGTTCTTEEEEECCTTSCCCCCCSEEEECCSCCSHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCHHHHHHhcCCCceEEEehHHHHHHHcCCCEEEECcccCCchh
Confidence 4899999999999999999999999999999874432111111112222334444334455677899999984310
Q ss_pred ------------------hhhcccccCCCEEEEecCcccccCCCCc----------ccccc-hHHHHHHHHHHHHHH---
Q 021854 175 ------------------ISNAGSLKGVQHVILLSQLSVYRGSGGI----------QALMK-GNARKLAEQDESMLM--- 222 (306)
Q Consensus 175 ------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~----------~~~~~-~~a~~~~~~aE~~l~--- 222 (306)
+.+++++.++ ++||+||.++|...... .++.+ ..+...|..+|.+++
T Consensus 81 ~~~~~~~~~~~Nv~g~~~ll~~~~~~~~-k~I~~SS~~vy~~~~~~~~~e~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~ 159 (312)
T d2b69a1 81 YMYNPIKTLKTNTIGTLNMLGLAKRVGA-RLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYM 159 (312)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHHHHHHTC-EEEEEEEGGGGBSCSSSSBCTTCCCBCCSSSTTHHHHHHHHHHHHHHHHHH
T ss_pred HHhCHHHHHHHHHHHHHHHHHHHHHcCC-cEEEEEChheecCCCCCCCCccccCCCCCCCCccHHHHHHHHHHHHHHHHH
Confidence 4456677776 79999999888632111 01111 123334555666654
Q ss_pred -hcCCCEEEEEcCcccCCC-C---------------CCccee-eecCCCCccccCHHHHHHHHHHHhhCCCCCCcEEEEe
Q 021854 223 -ASGIPYTIIRTGVLQNTP-G---------------GKQGFQ-FEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVV 284 (306)
Q Consensus 223 -~sgi~~tiiRPg~l~~~~-~---------------~~~~~~-~~~g~~~~~~Is~~DVA~~iv~aL~~~~~~g~~~~v~ 284 (306)
..+++++++||+.+.... . .++.+. ++.|.....+++++|+|+++..+++.. .+.+|+++
T Consensus 160 ~~~~~~~~~lR~~~vyGp~~~~~~~~~i~~~i~~~~~g~~i~i~~~g~~~r~~i~v~D~~~~~~~~~~~~--~~~~~n~~ 237 (312)
T d2b69a1 160 KQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSN--VSSPVNLG 237 (312)
T ss_dssp HHHCCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHHHHHHHHHTSS--CCSCEEES
T ss_pred HHhCCcEEEEEeeeEECCCCCCCCccHHHHHHHHHHcCCCeEEeCCCCeeEccEEHHHHHHHHHHHHhhc--cCCceEec
Confidence 469999999999965321 1 112232 245666678999999999999888654 35689999
Q ss_pred cCCc-CHHHHHHHHHHHhhhc
Q 021854 285 NGEE-KVSDWKKCFSRLMEKT 304 (306)
Q Consensus 285 ~g~~-s~~d~~~l~~~l~~~~ 304 (306)
++.. ++.++.+++..+.+..
T Consensus 238 ~~~~~~~~~~~~~i~~~~~~~ 258 (312)
T d2b69a1 238 NPEEHTILEFAQLIKNLVGSG 258 (312)
T ss_dssp CCCEEEHHHHHHHHHHHHTCC
T ss_pred CCcccchhhHHHHHHHHhCCC
Confidence 8764 7899999988887643
|
| >d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-N-acetylglucosamine 4-epimerase WbpP species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.85 E-value=5.8e-20 Score=168.05 Aligned_cols=209 Identities=12% Similarity=0.045 Sum_probs=149.8
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcch-------hh----hhcCCCceeeeccCCCHHHHHHHhcCc
Q 021854 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-------AM----ESFGTYVESMAGDASNKKFLKTALRGV 164 (306)
Q Consensus 96 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~-------~~----~~~~~~v~~v~~D~~d~~~l~~~~~~~ 164 (306)
..+.|+||||||||+||++++++|++.|++|++++|.... .. .....+++++.+|..|...+.....+.
T Consensus 13 ~~~~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~ 92 (341)
T d1sb8a_ 13 PAQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGV 92 (341)
T ss_dssp HHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTTC
T ss_pred CCCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeeccccccccccccccc
Confidence 3457899999999999999999999999999999874321 11 111247899999999999999999999
Q ss_pred cEEEEcCC--ch--------------------hhhcccccCCCEEEEecCcccccCCCCc------ccccchHHHHHHHH
Q 021854 165 RSIICPSE--GF--------------------ISNAGSLKGVQHVILLSQLSVYRGSGGI------QALMKGNARKLAEQ 216 (306)
Q Consensus 165 d~vi~~~~--g~--------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~------~~~~~~~a~~~~~~ 216 (306)
+.++|++. .. +.++|.+.++++||++||..+|...... .....+.+...|..
T Consensus 93 ~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~ 172 (341)
T d1sb8a_ 93 DYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTYGDHPGLPKVEDTIGKPLSPYAVTKYV 172 (341)
T ss_dssp SEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSHHHHHHHH
T ss_pred cccccccccccccccccCccchhheeehhHHHHHHHHHhcCCceEEEcccceeeCCCCCCCccCCCCCCCCCcchHHHHH
Confidence 99998732 10 4567888999999999999988632111 00001123334555
Q ss_pred HHHHHH----hcCCCEEEEEcCcccCCC-C-----------------CCcce-eeecCCCCccccCHHHHHHHHHHHhhC
Q 021854 217 DESMLM----ASGIPYTIIRTGVLQNTP-G-----------------GKQGF-QFEEGCAANGSLSKEDAAFICVEALES 273 (306)
Q Consensus 217 aE~~l~----~sgi~~tiiRPg~l~~~~-~-----------------~~~~~-~~~~g~~~~~~Is~~DVA~~iv~aL~~ 273 (306)
+|.++. ..+++++++||+.+.... . .+..+ .++.|.....+++++|+|.++..++..
T Consensus 173 ~E~~~~~~~~~~~i~~~ilR~~~v~G~~~~~~~~~~~~i~~~~~~~~~g~~i~~~g~g~~~r~~i~v~D~~~a~~~~~~~ 252 (341)
T d1sb8a_ 173 NELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQANLLAATA 252 (341)
T ss_dssp HHHHHHHHHHHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHhCCCeEEEEeceeeccCcCCCCchhhhHHHHHHHHHcCCceEEcCCCCEEEEEEEEeccchhhhhhhhc
Confidence 565554 468999999998744221 1 01122 234566678899999999999998876
Q ss_pred CC-CCCcEEEEecCC-cCHHHHHHHHHHHhhhc
Q 021854 274 IP-QTGLIFEVVNGE-EKVSDWKKCFSRLMEKT 304 (306)
Q Consensus 274 ~~-~~g~~~~v~~g~-~s~~d~~~l~~~l~~~~ 304 (306)
+. ..+.+|++.++. .++.++.+++.+..+..
T Consensus 253 ~~~~~~~~~~~~~~~~~si~~i~~~i~~~~~~~ 285 (341)
T d1sb8a_ 253 GLDARNQVYNIAVGGRTSLNQLFFALRDGLAEN 285 (341)
T ss_dssp CGGGCSEEEEESCSCCEEHHHHHHHHHHHHHHT
T ss_pred cccccceeeeecccccchHHHHHHHHHHHhccc
Confidence 53 567899999865 58899999888776543
|
| >d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptomyces venezuelae [TaxId: 54571]
Probab=99.84 E-value=2.1e-20 Score=169.79 Aligned_cols=203 Identities=16% Similarity=0.133 Sum_probs=144.7
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEe------cCc---ch--hhhh-cCCCceeeeccCCCHHHHHHHhcCccEE
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALV------KDK---RN--AMES-FGTYVESMAGDASNKKFLKTALRGVRSI 167 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~------R~~---~~--~~~~-~~~~v~~v~~D~~d~~~l~~~~~~~d~v 167 (306)
|+||||||||+||++++++|+++|++|.... +-. .+ .... ...+++++.+|..+...........|.|
T Consensus 1 MkIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~v 80 (322)
T d1r6da_ 1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLARELRGVDAI 80 (322)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHHHHTTTCCEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccHhHhhhhhcCCCeEEEEeccccchhhhccccccceE
Confidence 6899999999999999999999998654432 211 11 1111 2247899999999999999999999999
Q ss_pred EEcCC-c-h--------------------hhhcccccCCCEEEEecCcccccCCCCc-----ccccc-hHHHHHHHHHHH
Q 021854 168 ICPSE-G-F--------------------ISNAGSLKGVQHVILLSQLSVYRGSGGI-----QALMK-GNARKLAEQDES 219 (306)
Q Consensus 168 i~~~~-g-~--------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~-----~~~~~-~~a~~~~~~aE~ 219 (306)
+|++. . . +.+++.+.++++||++||..+|...... .+..+ +.+...|..+|.
T Consensus 81 i~~a~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~I~~Ss~~~yg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~ 160 (322)
T d1r6da_ 81 VHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVYGSIDSGSWTESSPLEPNSPYAASKAGSDL 160 (322)
T ss_dssp EECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGCCCSSSCBCTTSCCCCCSHHHHHHHHHHH
T ss_pred EeecccccccccccchHHHhhhhHHHHHHHHHHHHHcCCceEEEeecceeecCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Confidence 99842 1 0 4556778899999999999988643211 00111 123334555565
Q ss_pred HHH----hcCCCEEEEEcCcccCCCC--------------CCccee-eecCCCCccccCHHHHHHHHHHHhhCCCCCCcE
Q 021854 220 MLM----ASGIPYTIIRTGVLQNTPG--------------GKQGFQ-FEEGCAANGSLSKEDAAFICVEALESIPQTGLI 280 (306)
Q Consensus 220 ~l~----~sgi~~tiiRPg~l~~~~~--------------~~~~~~-~~~g~~~~~~Is~~DVA~~iv~aL~~~~~~g~~ 280 (306)
+++ +.+++++++||+.+..... .+..+. ++.|.....+++++|+|+++..+++++. .+++
T Consensus 161 ~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~i~~~i~~~~~~~~i~v~~~g~~~r~~i~v~D~a~ai~~~~~~~~-~~~~ 239 (322)
T d1r6da_ 161 VARAYHRTYGLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALVLAGGR-AGEI 239 (322)
T ss_dssp HHHHHHHHHCCCEEEEEECEEECTTCCTTSHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHHCC-TTCE
T ss_pred HHHHHHHHhCCCEEEEEeeeEECcCCCcCcHHHHHHHHHHcCCCcEEecCCCeEEccEEHHHHHHHHHHHHhCCC-CCCe
Confidence 554 4699999999998553211 123333 3456666789999999999999998765 4679
Q ss_pred EEEecCCc-CHHHHHHHHHHHhhh
Q 021854 281 FEVVNGEE-KVSDWKKCFSRLMEK 303 (306)
Q Consensus 281 ~~v~~g~~-s~~d~~~l~~~l~~~ 303 (306)
|++++++. ++.++.+.+..+.+.
T Consensus 240 ~ni~~~~~~s~~e~~~~i~~~~~~ 263 (322)
T d1r6da_ 240 YHIGGGLELTNRELTGILLDSLGA 263 (322)
T ss_dssp EEECCCCEEEHHHHHHHHHHHHTC
T ss_pred eEEeecccchhHHHHHHHHHHhCC
Confidence 99998774 788988888877654
|
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=99.84 E-value=3.4e-20 Score=171.68 Aligned_cols=201 Identities=11% Similarity=0.061 Sum_probs=141.7
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcch------hhhhc-CCCceeeeccCCCHHHHHHHhcC--ccEEEEc
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN------AMESF-GTYVESMAGDASNKKFLKTALRG--VRSIICP 170 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~------~~~~~-~~~v~~v~~D~~d~~~l~~~~~~--~d~vi~~ 170 (306)
|+||||||+|+||++|+++|++.|++|++..++... ..... ..+++++.+|++|...+..++++ +|+|||+
T Consensus 1 MkILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~Vihl 80 (361)
T d1kewa_ 1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQYQPDAVMHL 80 (361)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCccccHHHHHhhhhcCCcEEEEccCCCHHHHHHHHHhCCCCEEEEC
Confidence 689999999999999999999999987776665432 11111 24789999999999999999875 6999998
Q ss_pred CCch----------------------hhhccccc---------CCCEEEEecCcccccCCCCc---------------cc
Q 021854 171 SEGF----------------------ISNAGSLK---------GVQHVILLSQLSVYRGSGGI---------------QA 204 (306)
Q Consensus 171 ~~g~----------------------~~~~a~~~---------gvkr~V~iSS~~~~~~~~~~---------------~~ 204 (306)
++-. +.++|.+. ++++||++||..+|...... ..
T Consensus 81 Aa~~~~~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~e~~~ 160 (361)
T d1kewa_ 81 AAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTA 160 (361)
T ss_dssp CSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBCTTSC
T ss_pred ccccchhhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceeeCCCccCCccccccCCCCcccCCC
Confidence 4310 23344433 56799999999988632111 00
Q ss_pred ccc-hHHHHHHHHHHHHHH----hcCCCEEEEEcCcccCCCC--------------CCccee-eecCCCCccccCHHHHH
Q 021854 205 LMK-GNARKLAEQDESMLM----ASGIPYTIIRTGVLQNTPG--------------GKQGFQ-FEEGCAANGSLSKEDAA 264 (306)
Q Consensus 205 ~~~-~~a~~~~~~aE~~l~----~sgi~~tiiRPg~l~~~~~--------------~~~~~~-~~~g~~~~~~Is~~DVA 264 (306)
..+ +.+...|..+|.++. ..+++++++||+.+..... .++.+. ++.|.....+++++|+|
T Consensus 161 ~~p~s~Yg~sK~~~E~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~~~i~~~i~~~~~g~~~~v~g~g~~~r~~i~v~D~a 240 (361)
T d1kewa_ 161 YAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDHA 240 (361)
T ss_dssp CCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTTSHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEecCceECcCCCcCcHHHHHHHHHHcCCCcEEeCCCCeEEeCEEHHHHH
Confidence 111 123344666677665 3699999999998543211 123333 34566667899999999
Q ss_pred HHHHHHhhCCCCCCcEEEEecCC-cCHHHHHHHHHHHh
Q 021854 265 FICVEALESIPQTGLIFEVVNGE-EKVSDWKKCFSRLM 301 (306)
Q Consensus 265 ~~iv~aL~~~~~~g~~~~v~~g~-~s~~d~~~l~~~l~ 301 (306)
+++..+++.... +.+|+++++. .++.++.+.+....
T Consensus 241 ~ai~~~~~~~~~-~~~~Ni~s~~~~s~~~~~~~i~~~~ 277 (361)
T d1kewa_ 241 RALHMVVTEGKA-GETYNIGGHNEKKNLDVVFTICDLL 277 (361)
T ss_dssp HHHHHHHHHCCT-TCEEEECCCCEEEHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCC-CCeEEECCCCCcchHHHHhHhhhhc
Confidence 999999987654 6799999876 47888887776654
|
| >d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Polymyxin resistance protein ArnA (PrmI) species: Escherichia coli [TaxId: 562]
Probab=99.83 E-value=1.6e-19 Score=164.85 Aligned_cols=204 Identities=13% Similarity=0.048 Sum_probs=142.8
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCC-CeEEEEecCcchhhhhc-CCCceeeeccCCCHHHHH-HHhcCccEEEEcCCc--h
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAMESF-GTYVESMAGDASNKKFLK-TALRGVRSIICPSEG--F 174 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~g-~~V~~l~R~~~~~~~~~-~~~v~~v~~D~~d~~~l~-~~~~~~d~vi~~~~g--~ 174 (306)
|+||||||||+||++++++|+++| ++|+++.+......... ..+++++.+|+++.+.+. .+++++|+|||+++- .
T Consensus 1 MKILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~~~~~~~~i~~Di~~~~~~~~~~~~~~d~Vih~a~~~~~ 80 (342)
T d2blla1 1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLVAIATP 80 (342)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTCSHHHHHHHHHCSEEEECBCCCCH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhccCCCeEEEECccCChHHHHHHHHhCCCccccccccccc
Confidence 689999999999999999999999 58999988665543333 258999999998875554 477889999998331 0
Q ss_pred --------------------hhhcccccCCCEEEEecCcccccCCCCcc-------------cccchHHHHHHHHHHHHH
Q 021854 175 --------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQ-------------ALMKGNARKLAEQDESML 221 (306)
Q Consensus 175 --------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~~-------------~~~~~~a~~~~~~aE~~l 221 (306)
+.+++.+.++ +++++||..++....... ......+...|..+|.++
T Consensus 81 ~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~-~~~~~ss~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~ 159 (342)
T d2blla1 81 IEYTRNPLRVFELDFEENLRIIRYCVKYRK-RIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVI 159 (342)
T ss_dssp HHHHHSHHHHHHHHTHHHHHHHHHHHHTTC-EEEEECCGGGGBTCCCSSBCTTTCCCBCCCTTCGGGHHHHHHHHHHHHH
T ss_pred cccccCCccccccccccccccccccccccc-cccccccccccccccccccccccccccccccCCCcchhhhcccchhhhh
Confidence 3455666666 456778877765321110 001122333466677766
Q ss_pred H----hcCCCEEEEEcCcccCCC-C---------------------CCccee-eecCCCCccccCHHHHHHHHHHHhhCC
Q 021854 222 M----ASGIPYTIIRTGVLQNTP-G---------------------GKQGFQ-FEEGCAANGSLSKEDAAFICVEALESI 274 (306)
Q Consensus 222 ~----~sgi~~tiiRPg~l~~~~-~---------------------~~~~~~-~~~g~~~~~~Is~~DVA~~iv~aL~~~ 274 (306)
. ..+++++++||+.+.... . .+..+. ++.|+....+++++|+|+++..+++++
T Consensus 160 ~~~~~~~~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~r~~i~v~D~~~a~~~~~~~~ 239 (342)
T d2blla1 160 WAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRIIENA 239 (342)
T ss_dssp HHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEHHHHHHHHHHHHHCG
T ss_pred hhhhcccCceeEEeeccccccccccccccccccccccchHHHHHHHhCCCccccCCCCeeeeecccccccceeeeehhhc
Confidence 4 358999999998854221 0 012222 345666678999999999999999875
Q ss_pred --CCCCcEEEEecCC--cCHHHHHHHHHHHhhhc
Q 021854 275 --PQTGLIFEVVNGE--EKVSDWKKCFSRLMEKT 304 (306)
Q Consensus 275 --~~~g~~~~v~~g~--~s~~d~~~l~~~l~~~~ 304 (306)
...+++||+++++ .++.++.+.+.++.++.
T Consensus 240 ~~~~~g~~~Nig~~~~~~t~~~l~~~i~~~~~~~ 273 (342)
T d2blla1 240 GNRCDGEIINIGNPENEASIEELGEMLLASFEKH 273 (342)
T ss_dssp GGTTTTEEEEECCTTSEEEHHHHHHHHHHHHHTC
T ss_pred cccCCCeEEEEecccchhHHHHHHHHHHHHhCCC
Confidence 3557899998654 48899999888877643
|
| >d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Aldehyde reductase II species: Sporobolomyces salmonicolor [TaxId: 5005]
Probab=99.83 E-value=7.1e-20 Score=167.88 Aligned_cols=204 Identities=11% Similarity=0.048 Sum_probs=138.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh-------c-CCCceeeeccCCCHHHHHHHhcCccEEEE
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------F-GTYVESMAGDASNKKFLKTALRGVRSIIC 169 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~-------~-~~~v~~v~~D~~d~~~l~~~~~~~d~vi~ 169 (306)
.+++||||||+|+||++++++|+++|++|++++|+.++.... . ......+.+|+.|.+.+.+++.++|+|+|
T Consensus 10 ~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~v~~ 89 (342)
T d1y1pa1 10 EGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAGVAH 89 (342)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSEEEE
T ss_pred CcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHHHhhhccccccccEEEeccccchhhhhhhcccchhhhh
Confidence 479999999999999999999999999999999988653211 1 12344578999999999999999999998
Q ss_pred cCCch-------------------hhhcccc-cCCCEEEEecCcccccCCCC--cc-----------------------c
Q 021854 170 PSEGF-------------------ISNAGSL-KGVQHVILLSQLSVYRGSGG--IQ-----------------------A 204 (306)
Q Consensus 170 ~~~g~-------------------~~~~a~~-~gvkr~V~iSS~~~~~~~~~--~~-----------------------~ 204 (306)
++... +.+++.+ .++++|||+||..+.....+ .. .
T Consensus 90 ~a~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~~~i~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~ 169 (342)
T d1y1pa1 90 IASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPESDP 169 (342)
T ss_dssp CCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHHHHHSCTTST
T ss_pred hcccccccccccccccchhhhHHHHHHhhhcccccccccccccceeeccCCCCCCCccccccccccccccccccccccCC
Confidence 83310 3444555 47999999999765321110 00 0
Q ss_pred ccc-hHHHHHHHHHHH----HHHhc--CCCEEEEEcCcccCC---CCC--------------CcceeeecCCCCccccCH
Q 021854 205 LMK-GNARKLAEQDES----MLMAS--GIPYTIIRTGVLQNT---PGG--------------KQGFQFEEGCAANGSLSK 260 (306)
Q Consensus 205 ~~~-~~a~~~~~~aE~----~l~~s--gi~~tiiRPg~l~~~---~~~--------------~~~~~~~~g~~~~~~Is~ 260 (306)
..+ ..+...|..+|. +.++. +++++++||+..... +.. +.......++....++++
T Consensus 170 ~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~i~p~~v~Gp~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~v~v 249 (342)
T d1y1pa1 170 QKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPALALMPPQYYVSA 249 (342)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTTCCCHHHHTCCSEEEEEH
T ss_pred CCCcCcccchhHhHHHHHHHhhhhcccccccceecccceeCCCCCccccccchHHHHHHHHcCCcCcccCCccceeeeeH
Confidence 000 112233444554 44443 567888998874321 110 111111234445678999
Q ss_pred HHHHHHHHHHhhCCCCCCcEEEEecCCcCHHHHHHHHHHHh
Q 021854 261 EDAAFICVEALESIPQTGLIFEVVNGEEKVSDWKKCFSRLM 301 (306)
Q Consensus 261 ~DVA~~iv~aL~~~~~~g~~~~v~~g~~s~~d~~~l~~~l~ 301 (306)
+|+|++++.+++++...+..|...++..++.|+++++.++.
T Consensus 250 ~Dva~~~i~~l~~~~~~g~~~~~~~~~~t~~eia~~i~k~~ 290 (342)
T d1y1pa1 250 VDIGLLHLGCLVLPQIERRRVYGTAGTFDWNTVLATFRKLY 290 (342)
T ss_dssp HHHHHHHHHHHHCTTCCSCEEEECCEEECHHHHHHHHHHHC
T ss_pred HHHHHHHHHhhcCccccceEEEEcCCceEHHHHHHHHHHHc
Confidence 99999999999988877776655555568999999887764
|
| >d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=99.82 E-value=1.3e-19 Score=166.15 Aligned_cols=204 Identities=14% Similarity=0.093 Sum_probs=143.2
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcc-------hhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcC
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR-------NAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS 171 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~-------~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~ 171 (306)
+|+||||||||+||++|+++|++.|++|.+++++.. ......+.+++++.+|+.|.+.+..++.+++.|+|.+
T Consensus 2 ~mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~Di~d~~~~~~~~~~~~~v~~~a 81 (346)
T d1oc2a_ 2 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKLAAKADAIVHYA 81 (346)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHHHHTTCSEEEECC
T ss_pred cCEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccHHHHHHhhcCCeEEEEccCCCHHHHHHHHhhhhhhhhhh
Confidence 689999999999999999999999998777765421 1222344689999999999999999999999999873
Q ss_pred Cch----------------------hhhcccccCCCEEEEecCcccccCCCC-----------------cccccc-hHHH
Q 021854 172 EGF----------------------ISNAGSLKGVQHVILLSQLSVYRGSGG-----------------IQALMK-GNAR 211 (306)
Q Consensus 172 ~g~----------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~-----------------~~~~~~-~~a~ 211 (306)
... +.+++...+ .++|++||..+|..... .....+ +.+.
T Consensus 82 ~~~~~~~~~~~~~~~~~~N~~g~~nll~~~~~~~-~k~i~~ss~~vyg~~~~~~~~~~~~~~~~~~~~e~~~~~p~s~Y~ 160 (346)
T d1oc2a_ 82 AESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYD-IRFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPYS 160 (346)
T ss_dssp SCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHT-CEEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTSCCCCCSHHH
T ss_pred hcccccchhhCcccceeeehHhHHhhhhhhcccc-ccccccccceEecccCccccccccccCcccccccCCCCCCCCHHH
Confidence 310 234455666 47889988887742100 001111 1233
Q ss_pred HHHHHHHHHHH----hcCCCEEEEEcCcccCCCC---------------CCcceeeecCCCCccccCHHHHHHHHHHHhh
Q 021854 212 KLAEQDESMLM----ASGIPYTIIRTGVLQNTPG---------------GKQGFQFEEGCAANGSLSKEDAAFICVEALE 272 (306)
Q Consensus 212 ~~~~~aE~~l~----~sgi~~tiiRPg~l~~~~~---------------~~~~~~~~~g~~~~~~Is~~DVA~~iv~aL~ 272 (306)
..|..+|.+++ ..+++++++||+.+..... ......++.+.....+++++|+|++++.++.
T Consensus 161 ~sK~~~E~~~~~~~~~~~i~~~ilR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~i~~~g~~~r~~i~v~D~a~a~~~~~~ 240 (346)
T d1oc2a_ 161 STKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGVWAILT 240 (346)
T ss_dssp HHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCTTSHHHHHHHHHHHTCCCEEETTSCCEEECEEHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEEeecceeCCCCCccchhHHHHHHHHcCCceeEeCCCCccccccchhhHHHHHHHHHh
Confidence 34556666554 4699999999998653211 1222334566677889999999999998887
Q ss_pred CCCCCCcEEEEecCC-cCHHHHHHHHHHHhhhc
Q 021854 273 SIPQTGLIFEVVNGE-EKVSDWKKCFSRLMEKT 304 (306)
Q Consensus 273 ~~~~~g~~~~v~~g~-~s~~d~~~l~~~l~~~~ 304 (306)
.+.. +..|++++++ .++.++.+.+.+...++
T Consensus 241 ~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 272 (346)
T d1oc2a_ 241 KGRM-GETYLIGADGEKNNKEVLELILEKMGQP 272 (346)
T ss_dssp HCCT-TCEEEECCSCEEEHHHHHHHHHHHTTCC
T ss_pred hccc-CccccccccccccchHHHHHHHHHhCCC
Confidence 6654 5678888766 47888888877766553
|
| >d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.82 E-value=2.4e-19 Score=164.06 Aligned_cols=206 Identities=17% Similarity=0.148 Sum_probs=140.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcch-------------hhhhcCCCceeeeccCCCHHHHHHHhcCc
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-------------AMESFGTYVESMAGDASNKKFLKTALRGV 164 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~-------------~~~~~~~~v~~v~~D~~d~~~l~~~~~~~ 164 (306)
|.|+||||||||+||++|+++|++.|++|+++.|.... .......+++++.+|++|.+.+++++.+.
T Consensus 1 M~kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~ 80 (346)
T d1ek6a_ 1 MAEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKY 80 (346)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHC
T ss_pred CCCeEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHhcCCCcEEEEeecccccccccccccc
Confidence 56899999999999999999999999999998642211 11223468999999999999999988765
Q ss_pred --cEEEEcCC--c--------------------hhhhcccccCCCEEEEecCcccccCCCCcc-------cccchHHHHH
Q 021854 165 --RSIICPSE--G--------------------FISNAGSLKGVQHVILLSQLSVYRGSGGIQ-------ALMKGNARKL 213 (306)
Q Consensus 165 --d~vi~~~~--g--------------------~~~~~a~~~gvkr~V~iSS~~~~~~~~~~~-------~~~~~~a~~~ 213 (306)
++++|+++ + .+.+++.+.++++||++||..++....... ......+...
T Consensus 81 ~~~~i~h~Aa~~~~~~~~~~p~~~~~~Nv~gt~~l~~~~~~~~v~~~i~~ss~~~~~~~~~~~~~~~~~~~~~~~~Y~~~ 160 (346)
T d1ek6a_ 81 SFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKS 160 (346)
T ss_dssp CEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSSHHHHH
T ss_pred ccccccccccccCcHhhHhCHHHHHHhhhcccccccchhhhcCcccccccccceeeeccccccccccccccccCChHHHH
Confidence 56777633 1 044667889999999999998876322111 0011123333
Q ss_pred HHHHHHHHH----h-cCCCEEEEEcCcccCC-CC------------------------CCcceee-------ecCCCCcc
Q 021854 214 AEQDESMLM----A-SGIPYTIIRTGVLQNT-PG------------------------GKQGFQF-------EEGCAANG 256 (306)
Q Consensus 214 ~~~aE~~l~----~-sgi~~tiiRPg~l~~~-~~------------------------~~~~~~~-------~~g~~~~~ 256 (306)
|..+|..++ . .+++++++||+.+... .. ....+.+ ..+.....
T Consensus 161 k~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~~~~g~~~Rd 240 (346)
T d1ek6a_ 161 KFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVRD 240 (346)
T ss_dssp HHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEEC
T ss_pred HHHHHHHHHHHHHhccCCceEEEeecceeccCCCCCcCccccccHHHHHHHHHHHHHcCCCcEEEcCCcccCCCCCeeEe
Confidence 444454443 2 5899999999874321 10 0111111 12223356
Q ss_pred ccCHHHHHHHHHHHhhCC--CCCCcEEEEecCCc-CHHHHHHHHHHHhhh
Q 021854 257 SLSKEDAAFICVEALESI--PQTGLIFEVVNGEE-KVSDWKKCFSRLMEK 303 (306)
Q Consensus 257 ~Is~~DVA~~iv~aL~~~--~~~g~~~~v~~g~~-s~~d~~~l~~~l~~~ 303 (306)
+++++|+|.++..++... ...+++||++++.. ++.|+++.+.++.++
T Consensus 241 fi~v~D~a~~~~~~~~~~~~~~~~~i~Ni~~~~~~s~~dl~~~i~~~~~~ 290 (346)
T d1ek6a_ 241 YIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGK 290 (346)
T ss_dssp EEEHHHHHHHHHHHHHHHTTTCCEEEEEECCSCCEEHHHHHHHHHHHHCS
T ss_pred EEEEEeccchhhhhccccccccCceEEEeCCCCcccHHHHHHHHHHHhCC
Confidence 899999999998876543 34567999998664 889999999888765
|
| >d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.82 E-value=3.8e-19 Score=163.06 Aligned_cols=205 Identities=16% Similarity=0.111 Sum_probs=141.0
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcch-------hhhhcCCCceeeeccCCCHHHHHHHhc--CccEEEEc
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-------AMESFGTYVESMAGDASNKKFLKTALR--GVRSIICP 170 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~-------~~~~~~~~v~~v~~D~~d~~~l~~~~~--~~d~vi~~ 170 (306)
|.|||||||||||++|+++|+++|++|+++.|.... .......+++++.+|++|.+.++.+++ ++|+|||+
T Consensus 2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vihl 81 (347)
T d1z45a2 2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEYKIDSVIHF 81 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHSCCCEEEEC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhHHhhcccCCeEEEeecCCHHHHHHHHhccCCCEEEEc
Confidence 689999999999999999999999999998763322 122234689999999999999999887 78999998
Q ss_pred CCch----------------------hhhcccccCCCEEEEecCcccccCCCCc---------ccccc-hHHHHHHHHHH
Q 021854 171 SEGF----------------------ISNAGSLKGVQHVILLSQLSVYRGSGGI---------QALMK-GNARKLAEQDE 218 (306)
Q Consensus 171 ~~g~----------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~---------~~~~~-~~a~~~~~~aE 218 (306)
++-. +.+++++.+++|||++||..+|...... ....+ ..+...|..+|
T Consensus 82 Aa~~~~~~~~~~~~~~~~~N~~~t~~ll~~~~~~~i~~~i~~SS~~vyg~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E 161 (347)
T d1z45a2 82 AGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGHTKYAIE 161 (347)
T ss_dssp CSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCCGGGSTTCCSBCTTSCCCCCSHHHHHHHHHH
T ss_pred cccccccccccCcccccccchhhhHHHHHHHHhcccceEEeecceeeecCcccCCCCCccccccCCCCCChhHhHHHHHH
Confidence 4310 4566888999999999999988632110 11111 22444566777
Q ss_pred HHHHh------cCCCEEEEEcCcccC-CCC------------------------CCccee-eec------CCCCccccCH
Q 021854 219 SMLMA------SGIPYTIIRTGVLQN-TPG------------------------GKQGFQ-FEE------GCAANGSLSK 260 (306)
Q Consensus 219 ~~l~~------sgi~~tiiRPg~l~~-~~~------------------------~~~~~~-~~~------g~~~~~~Is~ 260 (306)
.++++ .+++++++||+.+.. .+. ....+. ++. +......++.
T Consensus 162 ~~~~~~~~~~~~~~~~~~lR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~~~~~~~~~d~~~~ 241 (347)
T d1z45a2 162 NILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGTPIRDYIHV 241 (347)
T ss_dssp HHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC------CCSSCEECEEEH
T ss_pred HHHHHHHHhhccCCcEEEEeecceEeecCCCccCCCccccHHHHHHHHHHHHhcCCCCeEEeCCCccccCCceeeeeeee
Confidence 76643 478999999876331 110 001111 111 1122346677
Q ss_pred HHHHHHHHHHhhC------CCCCCcEEEEecCCc-CHHHHHHHHHHHhhhc
Q 021854 261 EDAAFICVEALES------IPQTGLIFEVVNGEE-KVSDWKKCFSRLMEKT 304 (306)
Q Consensus 261 ~DVA~~iv~aL~~------~~~~g~~~~v~~g~~-s~~d~~~l~~~l~~~~ 304 (306)
.|++.+++.++.. ....+++||+++++. ++.++.+++.++.+..
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Ni~~~~~~s~~e~~~~i~~~~~~~ 292 (347)
T d1z45a2 242 VDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKASGID 292 (347)
T ss_dssp HHHHHHHHHHHHHHHHSCTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTCC
T ss_pred ecccccccccccccccccccccccccceecCCCcccHHHHHHHHHHHHCCC
Confidence 8888888887753 223468899988664 8999999998887653
|
| >d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.81 E-value=4.4e-19 Score=160.22 Aligned_cols=202 Identities=12% Similarity=-0.018 Sum_probs=138.3
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchh-----hhh-cCCCceeeeccCCCHHHHHHHhcCc--cEEEEcC
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-----MES-FGTYVESMAGDASNKKFLKTALRGV--RSIICPS 171 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~-----~~~-~~~~v~~v~~D~~d~~~l~~~~~~~--d~vi~~~ 171 (306)
|+||||||||+||++++++|+++||+|++++|..... ... ...+++++.+|+.|.+.+.+.+... +++++++
T Consensus 1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~~~a 80 (321)
T d1rpna_ 1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKAQPQEVYNLA 80 (321)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcccHHHHHHhcccCCcEEEEccccChHHhhhhhcccccccccccc
Confidence 6899999999999999999999999999999976431 111 1247899999999999999888754 5666663
Q ss_pred Cch----------------------hhhcccccCCC-EEEEecCcccccCCCCcc-----c-ccchHHHHHHHHHHHHHH
Q 021854 172 EGF----------------------ISNAGSLKGVQ-HVILLSQLSVYRGSGGIQ-----A-LMKGNARKLAEQDESMLM 222 (306)
Q Consensus 172 ~g~----------------------~~~~a~~~gvk-r~V~iSS~~~~~~~~~~~-----~-~~~~~a~~~~~~aE~~l~ 222 (306)
... +.+++++.+++ +|++.||..++....... . ...+.+...|..+|..+.
T Consensus 81 ~~~~~~~~~~~~~~~~~~n~~g~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~ 160 (321)
T d1rpna_ 81 AQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQAERQDENTPFYPRSPYGVAKLYGHWITV 160 (321)
T ss_dssp SCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHH
T ss_pred ccccccccccchHHHHhhhhhchHHHHHHHHHhCCCcccccccchhhcCcccCCCCCCCCCccccChhHHHHHHHHHHHH
Confidence 210 34566677755 677777766654211110 0 011223334555555543
Q ss_pred ----hcCCCEEEEEcCcccCCCC-------------------CCcceeeecCCCCccccCHHHHHHHHHHHhhCCCCCCc
Q 021854 223 ----ASGIPYTIIRTGVLQNTPG-------------------GKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGL 279 (306)
Q Consensus 223 ----~sgi~~tiiRPg~l~~~~~-------------------~~~~~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~~~g~ 279 (306)
..+++++++||+.+..... ....+.++.|+....+++++|+|++++.+++++. +.
T Consensus 161 ~~~~~~~~~~~~lr~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~i~~g~g~~~r~~i~v~D~~~~~~~~~~~~~--~~ 238 (321)
T d1rpna_ 161 NYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWLMLQQDK--AD 238 (321)
T ss_dssp HHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHHHHHHHHHSSS--CC
T ss_pred HHHhhcCCcEEEEEEecccCCCccccccHHHHHHHHHHHHhCCCCcEEECCCCeEEccEEeHHHHHHHHHHHhcCC--cC
Confidence 5789999999987432210 1122334556666789999999999999998775 35
Q ss_pred EEEEecCC-cCHHHHHHHHHHHhhh
Q 021854 280 IFEVVNGE-EKVSDWKKCFSRLMEK 303 (306)
Q Consensus 280 ~~~v~~g~-~s~~d~~~l~~~l~~~ 303 (306)
.|++++++ .++.++.+.+....+.
T Consensus 239 ~~ni~~~~~~s~~~~~~~~~~~~~~ 263 (321)
T d1rpna_ 239 DYVVATGVTTTVRDMCQIAFEHVGL 263 (321)
T ss_dssp CEEECCSCEEEHHHHHHHHHHTTTC
T ss_pred CceecccccceehhhhHHHHHHhCC
Confidence 69999866 4788888887776543
|
| >d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sulfolipid biosynthesis protein SQD1 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.80 E-value=5.5e-19 Score=164.47 Aligned_cols=207 Identities=18% Similarity=0.155 Sum_probs=138.2
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEec---C----------c---ch-------hhhhcCCCceeeeccCCCHH
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVK---D----------K---RN-------AMESFGTYVESMAGDASNKK 155 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R---~----------~---~~-------~~~~~~~~v~~v~~D~~d~~ 155 (306)
+|+||||||||+||++++++|++.||+|+++.. . . .. .....+.+++++.+|++|.+
T Consensus 1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~ 80 (393)
T d1i24a_ 1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDFE 80 (393)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhhcCCCcEEEEccCCCHH
Confidence 589999999999999999999999999998841 0 0 00 11122457999999999999
Q ss_pred HHHHHhcCc--cEEEEcCCc--h-----------------------hhhcccccCCC-EEEEecCcccccCCCCc-----
Q 021854 156 FLKTALRGV--RSIICPSEG--F-----------------------ISNAGSLKGVQ-HVILLSQLSVYRGSGGI----- 202 (306)
Q Consensus 156 ~l~~~~~~~--d~vi~~~~g--~-----------------------~~~~a~~~gvk-r~V~iSS~~~~~~~~~~----- 202 (306)
.++++++++ |+|||+++- . +.+++.+.+++ ++++.||..++......
T Consensus 81 ~l~~~~~~~~~d~ViHlAa~~~~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~~~ 160 (393)
T d1i24a_ 81 FLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPNIDIEEGY 160 (393)
T ss_dssp HHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGGCCCSSCBCSSE
T ss_pred HHHHHHHhhcchheeccccccccccccccccccccccccccccccHHHHHHHHhccccceeecccccccccccccccccc
Confidence 999999865 999998431 0 34556666655 56677776665421110
Q ss_pred c-------------cccc-hHHHHHHHHHHHHH----HhcCCCEEEEEcCcccCCCC-----------------------
Q 021854 203 Q-------------ALMK-GNARKLAEQDESML----MASGIPYTIIRTGVLQNTPG----------------------- 241 (306)
Q Consensus 203 ~-------------~~~~-~~a~~~~~~aE~~l----~~sgi~~tiiRPg~l~~~~~----------------------- 241 (306)
. +..+ ..+...|..+|.++ ++.+++++++||+.+.....
T Consensus 161 ~~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~~l~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~i 240 (393)
T d1i24a_ 161 ITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVFGTAL 240 (393)
T ss_dssp EEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCCSTTTCCHH
T ss_pred ccccccccccccccccccccHHHHHhhhhcccccccccccceeeeecccccccCCCccccccccccccccccccccccch
Confidence 0 0011 12344455666655 35799999999987542210
Q ss_pred --------CCccee-eecCCCCccccCHHHHHHHHHHHhhCCCCCCcEEEEec--CCcCHHHHHHHHHHHhhhcC
Q 021854 242 --------GKQGFQ-FEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVVN--GEEKVSDWKKCFSRLMEKTG 305 (306)
Q Consensus 242 --------~~~~~~-~~~g~~~~~~Is~~DVA~~iv~aL~~~~~~g~~~~v~~--g~~s~~d~~~l~~~l~~~~~ 305 (306)
.+..+. ++.+.....+++++|+++++..+++++...+..+.+.. ...++.++++++.++.++.+
T Consensus 241 ~~~~~~~~~~~~~~i~g~~~~~rd~v~v~D~~~a~~~~~~~~~~~g~~~~~~~~~~~~si~el~~~i~~~~~~~~ 315 (393)
T d1i24a_ 241 NRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFTEQFSVNELASLVTKAGSKLG 315 (393)
T ss_dssp HHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCCCTTCEEEEEECSEEEEHHHHHHHHHHHHHTTT
T ss_pred hhhhHHhhcCCeeEEeeecccccccccccchHHHHHHHHHhhcccceeeeecCCCCeeEHHHHHHHHHHHHHhhC
Confidence 011122 23455557899999999999999998777665444332 34578999999988876543
|
| >d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.78 E-value=3.6e-18 Score=155.73 Aligned_cols=199 Identities=14% Similarity=0.041 Sum_probs=134.6
Q ss_pred CeE-EEEcCCChHHHHHHHHHHHCCCeEEEEecCcch-----hhh-------hcCCCceeeeccCCCHHHHHHHhcCc--
Q 021854 100 DAV-LVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-----AME-------SFGTYVESMAGDASNKKFLKTALRGV-- 164 (306)
Q Consensus 100 ~~i-lVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~-----~~~-------~~~~~v~~v~~D~~d~~~l~~~~~~~-- 164 (306)
|+| ||||||||||++++++|+++||+|++++|..+. ... ....+++++.+|++|.+.+..++.+.
T Consensus 1 kKI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 80 (347)
T d1t2aa_ 1 RNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKP 80 (347)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHHCC
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeecCCchhhHHHHhhccc
Confidence 578 999999999999999999999999999996542 111 11246889999999999999998754
Q ss_pred cEEEEcCC-ch---------------------hhhcccccCC---CEEEEecCcccccCCCCc-----ccccc-hHHHHH
Q 021854 165 RSIICPSE-GF---------------------ISNAGSLKGV---QHVILLSQLSVYRGSGGI-----QALMK-GNARKL 213 (306)
Q Consensus 165 d~vi~~~~-g~---------------------~~~~a~~~gv---kr~V~iSS~~~~~~~~~~-----~~~~~-~~a~~~ 213 (306)
++++|.++ .. +.+++++.++ ++||++||..+|...... ..+.+ +.+...
T Consensus 81 ~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~P~~~Yg~s 160 (347)
T d1t2aa_ 81 TEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAA 160 (347)
T ss_dssp SEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSSSSBCTTSCCCCCSHHHHH
T ss_pred ceeeeeeeccccchhhccchhhhhhHHHHHHHHHHHHHHcCCCCCcEEEEecchheecCCCCCCCCCCCCCCCCCHHHHH
Confidence 67777622 11 3445666554 589999999887532111 01111 123344
Q ss_pred HHHHHHHHH----hcCCCEEEEEcCcccCCC-C------------------CCcceeeecCCCCccccCHHHHHHHHHHH
Q 021854 214 AEQDESMLM----ASGIPYTIIRTGVLQNTP-G------------------GKQGFQFEEGCAANGSLSKEDAAFICVEA 270 (306)
Q Consensus 214 ~~~aE~~l~----~sgi~~tiiRPg~l~~~~-~------------------~~~~~~~~~g~~~~~~Is~~DVA~~iv~a 270 (306)
|..+|.++. ..+++++++||+.+.... . ......++.+.....+++++|+|+++..+
T Consensus 161 K~~aE~~~~~~~~~~~~~~~ilr~~~vyGp~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~g~~~r~~i~v~D~~~a~~~~ 240 (347)
T d1t2aa_ 161 KLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEAMWLM 240 (347)
T ss_dssp HHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECCEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCEEEEEecceeCCCCCCCccccccceeeehhhcCCcceeecCCCcceeeeeEecHHHHHHHHH
Confidence 566676664 468999999998744321 0 12223345666668899999999999999
Q ss_pred hhCCCCCCcEEEEecCC-cCHHHHHHHHHHH
Q 021854 271 LESIPQTGLIFEVVNGE-EKVSDWKKCFSRL 300 (306)
Q Consensus 271 L~~~~~~g~~~~v~~g~-~s~~d~~~l~~~l 300 (306)
++.... ..|++..+. .++.+..+.....
T Consensus 241 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 269 (347)
T d1t2aa_ 241 LQNDEP--EDFVIATGEVHSVREFVEKSFLH 269 (347)
T ss_dssp HHSSSC--CCEEECCSCCEEHHHHHHHHHHH
T ss_pred hhcCCC--ccceeccccccccchhhhhhhhh
Confidence 987643 356666654 4666666655443
|
| >d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Trypanosoma brucei [TaxId: 5691]
Probab=99.78 E-value=3.3e-18 Score=158.72 Aligned_cols=205 Identities=15% Similarity=0.146 Sum_probs=138.2
Q ss_pred CCeEEEEcCCChHHHHHHHHHHH-CCCeEEEEec---Cc------ch---h----h-------hhcCCCceeeeccCCCH
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIV-KRTRIKALVK---DK------RN---A----M-------ESFGTYVESMAGDASNK 154 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~-~g~~V~~l~R---~~------~~---~----~-------~~~~~~v~~v~~D~~d~ 154 (306)
.|+||||||+||||++|+++|++ .|++|+++.+ .. +. . . ......+.++.+|++|.
T Consensus 2 ~MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~ 81 (383)
T d1gy8a_ 2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE 81 (383)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred cCEEEEeCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccCH
Confidence 57999999999999999999986 6899999863 11 00 0 0 00123678999999999
Q ss_pred HHHHHHhc---CccEEEEcCCch----------------------hhhcccccCCCEEEEecCcccccCCCCc-------
Q 021854 155 KFLKTALR---GVRSIICPSEGF----------------------ISNAGSLKGVQHVILLSQLSVYRGSGGI------- 202 (306)
Q Consensus 155 ~~l~~~~~---~~d~vi~~~~g~----------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~------- 202 (306)
+.++++++ ++|+|||+++.. +..++++.+++++++.|+...+......
T Consensus 82 ~~l~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~N~~~t~~~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 161 (383)
T d1gy8a_ 82 DFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVSTNAE 161 (383)
T ss_dssp HHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGTBSCCC-----CCC
T ss_pred HHhhhhhhccceeehhhcccccccccccccccccccccccccccccchhhhccCCccccccccccccccccccccccccc
Confidence 99998885 679999984310 3456788999999999988776532111
Q ss_pred -----cccc-chHHHHHHHHHHHHHH----hcCCCEEEEEcCcccCCCCC------------------------------
Q 021854 203 -----QALM-KGNARKLAEQDESMLM----ASGIPYTIIRTGVLQNTPGG------------------------------ 242 (306)
Q Consensus 203 -----~~~~-~~~a~~~~~~aE~~l~----~sgi~~tiiRPg~l~~~~~~------------------------------ 242 (306)
.... ...+...|..+|.+++ ..+++++++||+.+......
T Consensus 162 ~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~gl~~~~lR~~~vyG~~~~~~~~~~~~~~~~~ip~ii~~~~~~~~~~~~ 241 (383)
T d1gy8a_ 162 PIDINAKKSPESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDIAPDQR 241 (383)
T ss_dssp CBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHHHHHHSCC--
T ss_pred ccccccCCCCCCHHHhhHhHHHHHHHHHHHHhCCCEEEEecceeeccCccccccccccccchhHHHHHHHHHhhcccccc
Confidence 0011 1223344555566554 46999999999884421110
Q ss_pred ---------Cccee-ee------cCCCCccccCHHHHHHHHHHHhhCC--------CCCCcEEEEecCC-cCHHHHHHHH
Q 021854 243 ---------KQGFQ-FE------EGCAANGSLSKEDAAFICVEALESI--------PQTGLIFEVVNGE-EKVSDWKKCF 297 (306)
Q Consensus 243 ---------~~~~~-~~------~g~~~~~~Is~~DVA~~iv~aL~~~--------~~~g~~~~v~~g~-~s~~d~~~l~ 297 (306)
...+. ++ .|...+.+++++|+|+++..+++.. ...+++||++++. .++.|+.+++
T Consensus 242 ~~~~~~~~~~~~~~i~g~~~~~~dg~~~Rdfi~v~D~~~a~~~~~~~~~~~~~~~~~~~~~i~Ni~s~~~~s~~el~~~i 321 (383)
T d1gy8a_ 242 LTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNLGTSRGYSVREVIEVA 321 (383)
T ss_dssp ---------CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEESCSCCEEHHHHHHHH
T ss_pred chhhhhhhcCCceEEeCCccccCCCCeEEeeEEHHHHHHHHHHHHhhhccccccccccCccEEEeCCCCceeHHHHHHHH
Confidence 00000 11 1333356899999999999988642 2235799998765 5899999999
Q ss_pred HHHhhh
Q 021854 298 SRLMEK 303 (306)
Q Consensus 298 ~~l~~~ 303 (306)
.++.+.
T Consensus 322 ~~~~~~ 327 (383)
T d1gy8a_ 322 RKTTGH 327 (383)
T ss_dssp HHHHCC
T ss_pred HHHhCC
Confidence 887664
|
| >d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein PA4017 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.78 E-value=7.9e-19 Score=150.06 Aligned_cols=164 Identities=14% Similarity=0.093 Sum_probs=111.2
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCC--eEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHh-cCccEEEEcCCch-
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKRT--RIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTAL-RGVRSIICPSEGF- 174 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g~--~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~-~~~d~vi~~~~g~- 174 (306)
.|+||||||||+||++++++|+++|+ +|++++|++.... ..+ ..+..|..++...+ ..+|+||++.+..
T Consensus 2 ~KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~~~----~~~---~~~~~d~~~~~~~~~~~~d~vi~~~g~~~ 74 (212)
T d2a35a1 2 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAEH----PRL---DNPVGPLAELLPQLDGSIDTAFCCLGTTI 74 (212)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCCC----TTE---ECCBSCHHHHGGGCCSCCSEEEECCCCCH
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchhhc----ccc---cccccchhhhhhccccchheeeeeeeeec
Confidence 48999999999999999999999997 6777777653211 223 33444444444433 4579999874311
Q ss_pred -------------------hhhcccccCCCEEEEecCcccccCCCCcccccchHHHHHHHHHHHHHHhcCCC-EEEEEcC
Q 021854 175 -------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMASGIP-YTIIRTG 234 (306)
Q Consensus 175 -------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~~~~~aE~~l~~sgi~-~tiiRPg 234 (306)
+.+++++.++++||++|+.+++..... .+...|..+|..+++.+.+ ++|+||+
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~v~~~i~~Ss~~~~~~~~~-------~y~~~K~~~E~~l~~~~~~~~~I~Rp~ 147 (212)
T d2a35a1 75 KEAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADAKSSI-------FYNRVKGELEQALQEQGWPQLTIARPS 147 (212)
T ss_dssp HHHSSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTTCSS-------HHHHHHHHHHHHHTTSCCSEEEEEECC
T ss_pred cccccccccccchhhhhhhccccccccccccccccccccccccccc-------chhHHHHHHhhhccccccccceeeCCc
Confidence 456788899999999999888654332 2334567789999888875 9999999
Q ss_pred cccCCCCCCc-ceee-----ecCCCCccccCHHHHHHHHHHHhhCCCC
Q 021854 235 VLQNTPGGKQ-GFQF-----EEGCAANGSLSKEDAAFICVEALESIPQ 276 (306)
Q Consensus 235 ~l~~~~~~~~-~~~~-----~~g~~~~~~Is~~DVA~~iv~aL~~~~~ 276 (306)
.+........ ...+ ........+|+++|+|++++.+++++..
T Consensus 148 ~v~G~~~~~~~~~~~~~~~~~~~~~~~~~i~v~DvA~ai~~~~~~~~~ 195 (212)
T d2a35a1 148 LLFGPREEFRLAEILAAPIARILPGKYHGIEACDLARALWRLALEEGK 195 (212)
T ss_dssp SEESTTSCEEGGGGTTCCCC----CHHHHHHHHHHHHHHHHHHTCCCS
T ss_pred ceeCCcccccHHHHHHHHHhhccCCCCcEEEHHHHHHHHHHHHcCCCC
Confidence 8654322110 0000 0111223569999999999999987654
|
| >d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.76 E-value=5.4e-18 Score=153.90 Aligned_cols=204 Identities=9% Similarity=-0.056 Sum_probs=133.8
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcch-----hhhh-------cCCCceeeeccCCCHHHHHHHhc--Cc
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-----AMES-------FGTYVESMAGDASNKKFLKTALR--GV 164 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~-----~~~~-------~~~~v~~v~~D~~d~~~l~~~~~--~~ 164 (306)
.|++|||||||+||++|+++|+++||+|++++|..+. .... ....++++.+|+.+.+.+...++ ++
T Consensus 1 ~k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~ 80 (339)
T d1n7ha_ 1 RKIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIKP 80 (339)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHCC
T ss_pred CCEEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhhccccceEEEEccccCHHHHHHHHhhhcc
Confidence 4899999999999999999999999999999996532 1111 12367889999999999999886 56
Q ss_pred cEEEEcCCch----------------------hhhcccc-----cCCCEEEEecCcccccCCCCc----c-cccchHHHH
Q 021854 165 RSIICPSEGF----------------------ISNAGSL-----KGVQHVILLSQLSVYRGSGGI----Q-ALMKGNARK 212 (306)
Q Consensus 165 d~vi~~~~g~----------------------~~~~a~~-----~gvkr~V~iSS~~~~~~~~~~----~-~~~~~~a~~ 212 (306)
|+|||+++.. +.++++. ....++++.||...+...... . ....+.+..
T Consensus 81 D~Vih~Aa~~~~~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~~~~~~~~~~E~~~~~p~~~Y~~ 160 (339)
T d1n7ha_ 81 DEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPPQSETTPFHPRSPYAA 160 (339)
T ss_dssp SEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCSSBCTTSCCCCCSHHHH
T ss_pred chhhhccccccccccccCccccccccccccchhhhhhhhcccccccceeeeecccceecccCCCCCCCCCCCCCcchhhH
Confidence 9999984311 1222322 334567777776655432111 0 011112333
Q ss_pred HHHHHHHHH----HhcCCCEEEEEcCcccCCC-C-----------------CC-cceeeecCCCCccccCHHHHHHHHHH
Q 021854 213 LAEQDESML----MASGIPYTIIRTGVLQNTP-G-----------------GK-QGFQFEEGCAANGSLSKEDAAFICVE 269 (306)
Q Consensus 213 ~~~~aE~~l----~~sgi~~tiiRPg~l~~~~-~-----------------~~-~~~~~~~g~~~~~~Is~~DVA~~iv~ 269 (306)
.|..+|.++ +..+++++++||+.+.... . .. ..+..+.+.....+++++|+|+++..
T Consensus 161 sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~rd~~~v~D~a~~~~~ 240 (339)
T d1n7ha_ 161 SKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGFAGDYVEAMWL 240 (339)
T ss_dssp HHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEECEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCEEEEEEccccCCCCCCCCCcchhhHHHHHHhcCCCCeEEeCCCCccccceeeehHHHHHHH
Confidence 344455544 4579999999998854321 1 11 12223345556789999999999999
Q ss_pred HhhCCCCCCcEEEEecCCcCHHHHHHHHHHHhhh
Q 021854 270 ALESIPQTGLIFEVVNGEEKVSDWKKCFSRLMEK 303 (306)
Q Consensus 270 aL~~~~~~g~~~~v~~g~~s~~d~~~l~~~l~~~ 303 (306)
+++++... ..+...+...++.++.+++..+.+.
T Consensus 241 ~~~~~~~~-~~~~~~~~~~s~~~~~~~~~~~~~~ 273 (339)
T d1n7ha_ 241 MLQQEKPD-DYVVATEEGHTVEEFLDVSFGYLGL 273 (339)
T ss_dssp HHTSSSCC-EEEECCSCEEEHHHHHHHHHHHTTC
T ss_pred HHhcCCCC-ccccccccccccchhhhhhhhhhhc
Confidence 99887543 3344444556888888888877654
|
| >d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-tyvelose-2-epimerase species: Salmonella typhi [TaxId: 90370]
Probab=99.76 E-value=9.7e-18 Score=151.45 Aligned_cols=203 Identities=14% Similarity=0.060 Sum_probs=136.8
Q ss_pred eEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcch--h---hhh-cCCCceeeeccCCCHHHHHHHhcCc--cEEEEcCC
Q 021854 101 AVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN--A---MES-FGTYVESMAGDASNKKFLKTALRGV--RSIICPSE 172 (306)
Q Consensus 101 ~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~--~---~~~-~~~~v~~v~~D~~d~~~l~~~~~~~--d~vi~~~~ 172 (306)
+||||||||+||++++++|+++|++|+++.|-... . ... ...+++++.+|+.|.+.+.++++++ |+|||+++
T Consensus 2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~~~~~~~~~~~~i~~Di~~~~~l~~~~~~~~~d~Vih~aa 81 (338)
T d1orra_ 2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKYMPDSCFHLAG 81 (338)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHCCSEEEECCC
T ss_pred EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHHHHhhccCCcEEEEcccCCHHHHHHHHHhcCCceEEeecc
Confidence 79999999999999999999999999998642221 1 111 1357999999999999999999876 99999843
Q ss_pred ch----------------------hhhcccccCCCEEEEecCcccccCCCCc----------------------ccccc-
Q 021854 173 GF----------------------ISNAGSLKGVQHVILLSQLSVYRGSGGI----------------------QALMK- 207 (306)
Q Consensus 173 g~----------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~----------------------~~~~~- 207 (306)
.. +.+++.+.+++++|+.||..++...... ..+.+
T Consensus 82 ~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~i~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (338)
T d1orra_ 82 QVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLDFH 161 (338)
T ss_dssp CCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCTTSCCCCC
T ss_pred cccccccccChHHHHHHHHHHHHHHHHhhhcccccccccccccccccccccccccccccccccccccccCcccCCccccc
Confidence 10 4456778888888877776654321100 00001
Q ss_pred hHHHHHHHHHHHH----HHhcCCCEEEEEcCcccCCC--C--------------------CCccee-eecCCCCccccCH
Q 021854 208 GNARKLAEQDESM----LMASGIPYTIIRTGVLQNTP--G--------------------GKQGFQ-FEEGCAANGSLSK 260 (306)
Q Consensus 208 ~~a~~~~~~aE~~----l~~sgi~~tiiRPg~l~~~~--~--------------------~~~~~~-~~~g~~~~~~Is~ 260 (306)
..+...+...|.+ .+..++..+++|+..+.... . .+..+. ++.|.....++++
T Consensus 162 ~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~r~~~~v 241 (338)
T d1orra_ 162 SPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVRDVLHA 241 (338)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCEEEESSSCCEEECEEH
T ss_pred cccccccchhhhhhhhhhhccCcccccccccceeeccccccccccccchhhHHHHHHHhccCCceEEeCCCceeEeeecc
Confidence 1122233333433 34568888888876532111 0 122232 3455566789999
Q ss_pred HHHHHHHHHHhhCCC-CCCcEEEEecCC---cCHHHHHHHHHHHhhh
Q 021854 261 EDAAFICVEALESIP-QTGLIFEVVNGE---EKVSDWKKCFSRLMEK 303 (306)
Q Consensus 261 ~DVA~~iv~aL~~~~-~~g~~~~v~~g~---~s~~d~~~l~~~l~~~ 303 (306)
+|++++++.+++.+. ..+++|++..+. .++.|+.+++..+.+.
T Consensus 242 ~D~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~s~~e~~~~i~~~~~~ 288 (338)
T d1orra_ 242 EDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNI 288 (338)
T ss_dssp HHHHHHHHHHHHTHHHHTTCEEEESSCGGGEEEHHHHHHHHHHHHTC
T ss_pred cchhhHHHHHHhccccccCccccccccccccccHHHHHHHHHHHHCC
Confidence 999999999998754 567899997654 3678888887777654
|
| >d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative oxidoreductase Rv2002 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.76 E-value=8.9e-18 Score=147.58 Aligned_cols=190 Identities=14% Similarity=0.115 Sum_probs=134.6
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhh---hcCCCceeeeccCCCHHHHHHHhc-------CccE
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALR-------GVRS 166 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~---~~~~~v~~v~~D~~d~~~l~~~~~-------~~d~ 166 (306)
..+|+++||||+++||++++++|+++|++|++..|+.+++++ .++.++.++.+|++|+++++++++ .+|+
T Consensus 4 L~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~idi 83 (244)
T d1nffa_ 4 LTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHV 83 (244)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhCcceEEEeecCCHHHHHHHHHHHHHHhCCCeE
Confidence 468999999999999999999999999999999999977433 345678889999999988776653 5699
Q ss_pred EEEcCCch------------------------------hhhcccccCCCEEEEecCcccccCCCCcccccchHHHH--HH
Q 021854 167 IICPSEGF------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK--LA 214 (306)
Q Consensus 167 vi~~~~g~------------------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~--~~ 214 (306)
+|++++.. ....+.+.+-.++|++||..+..+......|..+++.- +.
T Consensus 84 linnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asKaal~~lt 163 (244)
T d1nffa_ 84 LVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGLT 163 (244)
T ss_dssp EEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHH
T ss_pred EEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcceEEeccccccccccccccchhhHHHHHHHHH
Confidence 99984411 11224445667999999999887777777776544321 22
Q ss_pred HHHHHHHHhcCCCEEEEEcCcccCCCCCCcceeeecCCCCccccCHHHHHHHHHHHhhCC--CCCCcEEEEecCC
Q 021854 215 EQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESI--PQTGLIFEVVNGE 287 (306)
Q Consensus 215 ~~aE~~l~~sgi~~tiiRPg~l~~~~~~~~~~~~~~g~~~~~~Is~~DVA~~iv~aL~~~--~~~g~~~~v~~g~ 287 (306)
+.....+...||++..|.||++............ .......+..++|||.++++++.+. .-.|+++.|.+|-
T Consensus 164 k~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~-~~~pl~R~~~p~diA~~v~fL~s~~s~~itG~~i~vDGG~ 237 (244)
T d1nffa_ 164 KSTALELGPSGIRVNSIHPGLVKTPMTDWVPEDI-FQTALGRAAEPVEVSNLVVYLASDESSYSTGAEFVVDGGT 237 (244)
T ss_dssp HHHHHHHGGGTEEEEEEEECCBCSGGGTTSCTTC-SCCSSSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred HHHHHHhcccCEEEEEEeeCCccChhHhhhhHHH-HhccccCCCCHHHHHHHHHHHhChhhCCCcCCEEEECCCe
Confidence 2233335568999999999986432211000000 0111233678999999999998643 3468999998775
|
| >d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: DTDP-4-dehydrorhamnose reductase RfbD species: Clostridium acetobutylicum [TaxId: 1488]
Probab=99.76 E-value=5.9e-18 Score=149.34 Aligned_cols=188 Identities=14% Similarity=0.066 Sum_probs=134.3
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcC--ccEEEEcCCch---
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRG--VRSIICPSEGF--- 174 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~--~d~vi~~~~g~--- 174 (306)
|+||||||||+||++++++|.++|++|++++|+. .|+.|.+.+++++++ .|+|||+++..
T Consensus 2 MKIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~---------------~D~~d~~~~~~~l~~~~~d~vih~a~~~~~~ 66 (281)
T d1vl0a_ 2 MKILITGANGQLGREIQKQLKGKNVEVIPTDVQD---------------LDITNVLAVNKFFNEKKPNVVINCAAHTAVD 66 (281)
T ss_dssp EEEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT---------------CCTTCHHHHHHHHHHHCCSEEEECCCCCCHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEeechh---------------ccCCCHHHHHHHHHHcCCCEEEeeccccccc
Confidence 6799999999999999999999999999998864 489999999999974 59999984311
Q ss_pred ------------------hhhcccccCCCEEEEecCcccccCCCCc-----c-cccchHHHHHHHHHHHHHHhcCCCEEE
Q 021854 175 ------------------ISNAGSLKGVQHVILLSQLSVYRGSGGI-----Q-ALMKGNARKLAEQDESMLMASGIPYTI 230 (306)
Q Consensus 175 ------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~-----~-~~~~~~a~~~~~~aE~~l~~sgi~~ti 230 (306)
...........++++.||..++...... . ......+...+...|.++++.++++++
T Consensus 67 ~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~ss~~v~~~~~~~~~~e~~~~~~~~~~~~~k~~~e~~~~~~~~~~~i 146 (281)
T d1vl0a_ 67 KCEEQYDLAYKINAIGPKNLAAAAYSVGAEIVQISTDYVFDGEAKEPITEFDEVNPQSAYGKTKLEGENFVKALNPKYYI 146 (281)
T ss_dssp HHHHCHHHHHHHHTHHHHHHHHHHHHHTCEEEEEEEGGGSCSCCSSCBCTTSCCCCCSHHHHHHHHHHHHHHHHCSSEEE
T ss_pred cccccchhhcccccccccccccccccccccccccccceeeeccccccccccccccchhhhhhhhhHHHHHHHHhCCCccc
Confidence 0011122344577788887765432111 0 001112344566788899999999999
Q ss_pred EEcCcccCCCCC----------CcceeeecCCCCccccCHHHHHHHHHHHhhCCCCCCcEEEEecCC-cCHHHHHHHHHH
Q 021854 231 IRTGVLQNTPGG----------KQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVVNGE-EKVSDWKKCFSR 299 (306)
Q Consensus 231 iRPg~l~~~~~~----------~~~~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~~~g~~~~v~~g~-~s~~d~~~l~~~ 299 (306)
+||+++...... ........++....+++++|+++++..++++... .+|++++++ .++.|+++.+.+
T Consensus 147 ~R~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~~~~~~~~~~~~~~--g~~~~~~~~~~s~~e~~~~i~~ 224 (281)
T d1vl0a_ 147 VRTAWLYGDGNNFVKTMINLGKTHDELKVVHDQVGTPTSTVDLARVVLKVIDEKNY--GTFHCTCKGICSWYDFAVEIFR 224 (281)
T ss_dssp EEECSEESSSSCHHHHHHHHHHHCSEEEEESSCEECCEEHHHHHHHHHHHHHHTCC--EEEECCCBSCEEHHHHHHHHHH
T ss_pred cceeEEeCCCcccccchhhhhccCCceeecCCceeccchhhhhhhhhhhhhhhccc--CceeEeCCCccchHHHHHHHHH
Confidence 999996533221 1112223456667899999999999999987653 489888866 588999998888
Q ss_pred Hhhhc
Q 021854 300 LMEKT 304 (306)
Q Consensus 300 l~~~~ 304 (306)
..++.
T Consensus 225 ~~g~~ 229 (281)
T d1vl0a_ 225 LTGID 229 (281)
T ss_dssp HHCCC
T ss_pred HhCCC
Confidence 77643
|
| >d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) species: Escherichia coli [TaxId: 562]
Probab=99.74 E-value=3.4e-17 Score=147.33 Aligned_cols=192 Identities=10% Similarity=0.104 Sum_probs=134.5
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcC--ccEEEEcCC---c
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRG--VRSIICPSE---G 173 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~--~d~vi~~~~---g 173 (306)
.|+||||||||+||++|+++|+++|+.|+++.+.. ..|+.|.+.+..++++ +|.|+|++. +
T Consensus 2 kkkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~~--------------~~~~~~~~~~~~~~~~~~~d~v~~~a~~~~~ 67 (315)
T d1e6ua_ 2 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD--------------ELNLLDSRAVHDFFASERIDQVYLAAAKVGG 67 (315)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT--------------TCCTTCHHHHHHHHHHHCCSEEEECCCCCCC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCch--------------hccccCHHHHHHHHhhcCCCEEEEcchhccc
Confidence 57999999999999999999999999987654322 1578999999888764 699998732 1
Q ss_pred h--------------------hhhcccccCCCEEEEecCcccccCCCCc----------cccc-chHHHHHHHHHHHHHH
Q 021854 174 F--------------------ISNAGSLKGVQHVILLSQLSVYRGSGGI----------QALM-KGNARKLAEQDESMLM 222 (306)
Q Consensus 174 ~--------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~----------~~~~-~~~a~~~~~~aE~~l~ 222 (306)
. ++++|.+.+++||||+||.++|.+.... .... .+.+...|..+|.+++
T Consensus 68 ~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~v~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~~~ 147 (315)
T d1e6ua_ 68 IVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIAKIAGIKLCE 147 (315)
T ss_dssp HHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGSCTTCCSSBCGGGTTSSCCCGGGHHHHHHHHHHHHHHH
T ss_pred cccchhhHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCceEcCCCCCCCccCCccccCCCCCCCCHHHHHHHHHHHHHH
Confidence 0 4466778999999999999998642211 0000 1124445666777664
Q ss_pred ----hcCCCEEEEEcCcccCC-CC----------------------CCcce-eeecCCCCccccCHHHHHHHHHHHhhCC
Q 021854 223 ----ASGIPYTIIRTGVLQNT-PG----------------------GKQGF-QFEEGCAANGSLSKEDAAFICVEALESI 274 (306)
Q Consensus 223 ----~sgi~~tiiRPg~l~~~-~~----------------------~~~~~-~~~~g~~~~~~Is~~DVA~~iv~aL~~~ 274 (306)
+.+++++++||+.+... .. ....+ ..+.+.....+++++|+++++..++...
T Consensus 148 ~~~~~~gl~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~v~d~~~~~~~~~~~~ 227 (315)
T d1e6ua_ 148 SYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAAASIHVMELA 227 (315)
T ss_dssp HHHHHHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEEHHHHHHHHHHHHHSC
T ss_pred HHHHHhCCCEEEEeeccEECCCCCCCccccccceeeeccchhhhhccCCceEEcCCCceEEEEEEeehhHHHHHHhhhhc
Confidence 46999999999885432 10 11111 2234455578899999999999998664
Q ss_pred C--------CCCcEEEEecCC-cCHHHHHHHHHHHhhhc
Q 021854 275 P--------QTGLIFEVVNGE-EKVSDWKKCFSRLMEKT 304 (306)
Q Consensus 275 ~--------~~g~~~~v~~g~-~s~~d~~~l~~~l~~~~ 304 (306)
. .....+++..+. .++.++.+++.++.+..
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~i~~~~~~~ 266 (315)
T d1e6ua_ 228 HEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYK 266 (315)
T ss_dssp HHHHHHTSBTTBCCEEESCSCCEEHHHHHHHHHHHHTCC
T ss_pred cccccccccccccccccCCCcchHHHHHHHHHHHHhCCC
Confidence 2 124567777655 47889999888877643
|
| >d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Escherichia coli [TaxId: 562]
Probab=99.74 E-value=5.5e-18 Score=148.81 Aligned_cols=191 Identities=14% Similarity=0.147 Sum_probs=134.6
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhh---hcCCCceeeeccCCCHHHHHHHhc-------CccE
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALR-------GVRS 166 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~---~~~~~v~~v~~D~~d~~~l~~~~~-------~~d~ 166 (306)
.++|+++||||+++||++++++|+++|++|++..|+.+++++ .++.+...+.+|++|.++++++++ .+|+
T Consensus 2 l~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi 81 (243)
T d1q7ba_ 2 FEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLMLNVTDPASIESVLEKIRAEFGEVDI 81 (243)
T ss_dssp CTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHTCSCSE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCCcEEEEEecCHHHhhhhhhhhhcccCCcce
Confidence 468999999999999999999999999999999999877443 345578889999999988777664 5799
Q ss_pred EEEcCCch------------------------------hhhcccccCCCEEEEecCcccccCCCCcccccchHHHH--HH
Q 021854 167 IICPSEGF------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK--LA 214 (306)
Q Consensus 167 vi~~~~g~------------------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~--~~ 214 (306)
+|++++.. ....+++.+-.++|++||..+..+......|..+++.- +.
T Consensus 82 lVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~~~~~Y~asKaal~~lt 161 (243)
T d1q7ba_ 82 LVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNGGQANYAAAKAGLIGFS 161 (243)
T ss_dssp EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHHHHHHHH
T ss_pred ehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecchhhcCCCCCCHHHHHHHHHHHHHH
Confidence 99884311 11224456668999999999887777777776554321 22
Q ss_pred HHHHHHHHhcCCCEEEEEcCcccCCCC----CCcceeeecCCCCccccCHHHHHHHHHHHhhCCC--CCCcEEEEecCC
Q 021854 215 EQDESMLMASGIPYTIIRTGVLQNTPG----GKQGFQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVNGE 287 (306)
Q Consensus 215 ~~aE~~l~~sgi~~tiiRPg~l~~~~~----~~~~~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~~~v~~g~ 287 (306)
+.....+...||++..|.||++..... ......+.......-+..++|||.++++++.+.. -.|+++.|.+|-
T Consensus 162 ~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~s~~itGq~i~vdGG~ 240 (243)
T d1q7ba_ 162 KSLAREVASRGITVNVVAPGFIETDMTRALSDDQRAGILAQVPAGRLGGAQEIANAVAFLASDEAAYITGETLHVNGGM 240 (243)
T ss_dssp HHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred HHHHHHhCccCeEEEEEecceEechhhhhhhhhHHHHHHhcCCCCCCCCHHHHHHHHHHHhCchhcCCcCCeEEECCCe
Confidence 223333556899999999998642210 0000001111122345689999999999996533 478999998774
|
| >d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (s)-1-phenylethanol dehydrogenase species: Azoarcus sp. ebn1 [TaxId: 76114]
Probab=99.73 E-value=7.6e-17 Score=141.72 Aligned_cols=191 Identities=13% Similarity=0.058 Sum_probs=131.8
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchh----hhhcCCCceeeeccCCCHHHHHHHh-------cCcc
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA----MESFGTYVESMAGDASNKKFLKTAL-------RGVR 165 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~----~~~~~~~v~~v~~D~~d~~~l~~~~-------~~~d 165 (306)
..+|+++||||+++||+++++.|+++|++|++..|+..+. .+..+.++..+.+|++|++++++++ ..+|
T Consensus 3 L~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~G~iD 82 (247)
T d2ew8a1 3 LKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCD 82 (247)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCCCC
Confidence 4689999999999999999999999999999999987542 2234567889999999998887765 3679
Q ss_pred EEEEcCCch------------------------------hhhcccccCCCEEEEecCcccccCCCCcccccchHHHH--H
Q 021854 166 SIICPSEGF------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK--L 213 (306)
Q Consensus 166 ~vi~~~~g~------------------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~--~ 213 (306)
++|++++.. ....+++.+-.++|++||..+..+......|..+++.- +
T Consensus 83 ilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~asKaal~~l 162 (247)
T d2ew8a1 83 ILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYISTKAANIGF 162 (247)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCSSCHHHHHHHHHHHHH
T ss_pred EEEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCCccccccchhcccCcccccchhhhccHHHH
Confidence 999984411 11224556678999999999887777777776654322 2
Q ss_pred HHHHHHHHHhcCCCEEEEEcCcccCCCCC----Cc-ceeeec-CCCCccccCHHHHHHHHHHHhhCCC--CCCcEEEEec
Q 021854 214 AEQDESMLMASGIPYTIIRTGVLQNTPGG----KQ-GFQFEE-GCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVN 285 (306)
Q Consensus 214 ~~~aE~~l~~sgi~~tiiRPg~l~~~~~~----~~-~~~~~~-g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~~~v~~ 285 (306)
.+.....+...||++..|.||++...... .. ...... ......+..++|||.++++++.+.. -.|+++.|.+
T Consensus 163 tk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~l~r~~~pedvA~~v~fL~S~~s~~itG~~i~vDG 242 (247)
T d2ew8a1 163 TRALASDLGKDGITVNAIAPSLVRTATTEASALSAMFDVLPNMLQAIPRLQVPLDLTGAAAFLASDDASFITGQTLAVDG 242 (247)
T ss_dssp HHHHHHHHGGGTEEEEEEEECCC------------------CTTSSSCSCCCTHHHHHHHHHHTSGGGTTCCSCEEEESS
T ss_pred HHHHHHHhcccCeEEEEEeeCCCCCccccccccchhHHHHHHHhccCCCCCCHHHHHHHHHHHhCchhcCCcCCeEEECC
Confidence 23333345568999999999986422110 00 000101 1111234578999999999986433 4789999988
Q ss_pred CC
Q 021854 286 GE 287 (306)
Q Consensus 286 g~ 287 (306)
|-
T Consensus 243 G~ 244 (247)
T d2ew8a1 243 GM 244 (247)
T ss_dssp SC
T ss_pred CE
Confidence 74
|
| >d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase species: Streptomyces hydrogenans [TaxId: 1905]
Probab=99.73 E-value=2e-17 Score=146.19 Aligned_cols=188 Identities=13% Similarity=0.066 Sum_probs=133.1
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhh---hcCCCceeeeccCCCHHHHHHHhc-------CccE
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALR-------GVRS 166 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~---~~~~~v~~v~~D~~d~~~l~~~~~-------~~d~ 166 (306)
..+|+++||||+++||++++++|+++|++|++..|+.+++.+ .++.++.++.+|++|+++++++++ .+|+
T Consensus 3 L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi 82 (254)
T d1hdca_ 3 LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDG 82 (254)
T ss_dssp CCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred CCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCceEEEEcccCCHHHHHHHHHHHHHHcCCccE
Confidence 468999999999999999999999999999999999877443 234578899999999988877653 5799
Q ss_pred EEEcCCch------------------------------hhhcccccCCCEEEEecCcccccCCCCcccccchHHHH--HH
Q 021854 167 IICPSEGF------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK--LA 214 (306)
Q Consensus 167 vi~~~~g~------------------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~--~~ 214 (306)
+|++++.. ....+++.+-.++|++||..+..+......|..+++.- +.
T Consensus 83 lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS~~~~~~~~~~~~Y~asKaal~~lt 162 (254)
T d1hdca_ 83 LVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGVRGLS 162 (254)
T ss_dssp EEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHH
T ss_pred EEecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCCCeecccccchhcccccchhhHHHHHHHHHHHH
Confidence 99884311 11223456678999999999888777777776544321 22
Q ss_pred HHHHHHHHhcCCCEEEEEcCcccCCC------CCCcceeeecCCCCccc--cCHHHHHHHHHHHhhCCC--CCCcEEEEe
Q 021854 215 EQDESMLMASGIPYTIIRTGVLQNTP------GGKQGFQFEEGCAANGS--LSKEDAAFICVEALESIP--QTGLIFEVV 284 (306)
Q Consensus 215 ~~aE~~l~~sgi~~tiiRPg~l~~~~------~~~~~~~~~~g~~~~~~--Is~~DVA~~iv~aL~~~~--~~g~~~~v~ 284 (306)
+.....+...||++..|.||++.... ...... ......+. ..++|||.++++++.+.. -.|+++.|.
T Consensus 163 ~~lA~e~a~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~---~~~~pl~R~g~~PedvA~~v~fL~S~~a~~itG~~i~vD 239 (254)
T d1hdca_ 163 KLAAVELGTDRIRVNSVHPGMTYTPMTAETGIRQGEGN---YPNTPMGRVGNEPGEIAGAVVKLLSDTSSYVTGAELAVD 239 (254)
T ss_dssp HHHHHHHGGGTEEEEEEEECSBCCHHHHHHTCCCSTTS---CTTSTTSSCB-CHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred HHHHHHhCCCceEEEEeeeCcccCccchhcCHHHHHHH---HhCCCCCCCCCCHHHHHHHHHHHhchhhCCCCCceEEeC
Confidence 22333345679999999999864211 111111 11111222 357999999999996433 468999999
Q ss_pred cCC
Q 021854 285 NGE 287 (306)
Q Consensus 285 ~g~ 287 (306)
+|-
T Consensus 240 GG~ 242 (254)
T d1hdca_ 240 GGW 242 (254)
T ss_dssp TTT
T ss_pred CCc
Confidence 875
|
| >d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.73 E-value=5.1e-17 Score=142.60 Aligned_cols=192 Identities=15% Similarity=0.066 Sum_probs=134.4
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhc--CCCceeeeccCCCHHHHHHHhcC---ccEEEEc
Q 021854 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF--GTYVESMAGDASNKKFLKTALRG---VRSIICP 170 (306)
Q Consensus 96 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~--~~~v~~v~~D~~d~~~l~~~~~~---~d~vi~~ 170 (306)
.+.+|+++||||+++||++++++|+++|++|+++.|+.+++++.. ..++..+.+|++|.+.++++++. +|++|++
T Consensus 4 ~L~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~g~iDilVnn 83 (244)
T d1pr9a_ 4 FLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALGSVGPVDLLVNN 83 (244)
T ss_dssp CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCCEEEEC
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHHhCCceEEEec
Confidence 457899999999999999999999999999999999988754332 24688999999999999988864 5999988
Q ss_pred CCch------------------------------hhh-cccccCCCEEEEecCcccccCCCCcccccchHHHH--HHHHH
Q 021854 171 SEGF------------------------------ISN-AGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK--LAEQD 217 (306)
Q Consensus 171 ~~g~------------------------------~~~-~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~--~~~~a 217 (306)
++.. ... ..++.+..++|++||..+..+......|..+++.- +.+..
T Consensus 84 Ag~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~~~~~Y~asKaal~~lt~~l 163 (244)
T d1pr9a_ 84 AAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKVM 163 (244)
T ss_dssp CCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHH
T ss_pred cccccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeecccccccccccchhhhhhhHHHHHHHHHHH
Confidence 4411 111 12334567999999999887777777776544321 22222
Q ss_pred HHHHHhcCCCEEEEEcCcccCCCC----CCcce--eeecCCCCccccCHHHHHHHHHHHhhCCC--CCCcEEEEecCC
Q 021854 218 ESMLMASGIPYTIIRTGVLQNTPG----GKQGF--QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVNGE 287 (306)
Q Consensus 218 E~~l~~sgi~~tiiRPg~l~~~~~----~~~~~--~~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~~~v~~g~ 287 (306)
...+...+|++..|.||++..... ..... .+........+..++|||.++++++.+.. -.|+++.|.+|-
T Consensus 164 A~el~~~gIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~R~~~peevA~~v~fL~S~~a~~itG~~i~vDGG~ 241 (244)
T d1pr9a_ 164 ALELGPHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPLGKFAEVEHVVNAILFLLSDRSGMTTGSTLPVEGGF 241 (244)
T ss_dssp HHHHGGGTEEEEEEEECCBCSHHHHTTSCSHHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred HHHhCCCcEEEEEEeeCcCcChHHhhhccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhCCcCCcEEEECccH
Confidence 233456799999999998642211 10000 01011122346789999999999986533 578999998774
|
| >d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=99.72 E-value=3.3e-17 Score=144.43 Aligned_cols=191 Identities=17% Similarity=0.178 Sum_probs=133.8
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhh------hcCCCceeeeccCCCHHHHHHHhc-------C
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTALR-------G 163 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~------~~~~~v~~v~~D~~d~~~l~~~~~-------~ 163 (306)
..+|.++||||+++||++++++|+++|++|+++.|+.+++++ ..+.++..+.+|++|+++++++++ .
T Consensus 8 lenKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~ 87 (251)
T d2c07a1 8 GENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKN 87 (251)
T ss_dssp CSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSC
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhcCC
Confidence 347999999999999999999999999999999999876432 234578899999999988877664 5
Q ss_pred ccEEEEcCCch------------------------------hhhcccccCCCEEEEecCcccccCCCCcccccchHHH--
Q 021854 164 VRSIICPSEGF------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR-- 211 (306)
Q Consensus 164 ~d~vi~~~~g~------------------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~-- 211 (306)
+|++|++++.. ....+++.+-.+||++||..+..+......|..+++.
T Consensus 88 iDilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~~~~~Y~asKaal~ 167 (251)
T d2c07a1 88 VDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQANYSSSKAGVI 167 (251)
T ss_dssp CCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHHHHH
T ss_pred ceeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCCCeEEEEECCHHhcCCCCCCHHHHHHHHHHH
Confidence 79999874311 1122445667899999999988777777777655432
Q ss_pred HHHHHHHHHHHhcCCCEEEEEcCcccCCCCCCcce----eeecCCCCccccCHHHHHHHHHHHhhCCC--CCCcEEEEec
Q 021854 212 KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGF----QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVN 285 (306)
Q Consensus 212 ~~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~~~~----~~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~~~v~~ 285 (306)
.+.+.....+...||++..|.||++.......... .+.......-+..++|||.++++++.+.. -.|+++.|.+
T Consensus 168 ~ltr~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~s~~itG~~i~vDG 247 (251)
T d2c07a1 168 GFTKSLAKELASRNITVNAIAPGFISSDMTDKISEQIKKNIISNIPAGRMGTPEEVANLACFLSSDKSGYINGRVFVIDG 247 (251)
T ss_dssp HHHHHHHHHHGGGTEEEEEEEECSBCC-----CCHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred HHHHHHHHHhhhhCeEEEEEccCCEecccccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhCCCcCcEEEECC
Confidence 12233333455689999999999865332111000 01111122335689999999999986543 4689999987
Q ss_pred CC
Q 021854 286 GE 287 (306)
Q Consensus 286 g~ 287 (306)
|-
T Consensus 248 G~ 249 (251)
T d2c07a1 248 GL 249 (251)
T ss_dssp TS
T ss_pred Cc
Confidence 74
|
| >d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein TTHA0369 species: Thermus thermophilus [TaxId: 274]
Probab=99.72 E-value=7.9e-17 Score=141.72 Aligned_cols=191 Identities=13% Similarity=0.033 Sum_probs=131.5
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhc-------CccEEEE
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR-------GVRSIIC 169 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~-------~~d~vi~ 169 (306)
..+|++|||||+++||++++++|+++|++|++..|+.+..+.....+..++.+|++|.++++++++ .+|++|+
T Consensus 3 l~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLVn 82 (248)
T d2d1ya1 3 FAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVAEAIGGAFFQVDLEDERERVRFVEEAAYALGRVDVLVN 82 (248)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHHHHHHHHTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhcCCCCeEEE
Confidence 358999999999999999999999999999999999876332222246788999999888776654 5799999
Q ss_pred cCCch------------------------------hhhcccccCCCEEEEecCcccccCCCCcccccchHHHH--HHHHH
Q 021854 170 PSEGF------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK--LAEQD 217 (306)
Q Consensus 170 ~~~g~------------------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~--~~~~a 217 (306)
+++.. ....+++.+-.++|++||..+..+......|..+++.- +.+..
T Consensus 83 nAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asKaal~~ltk~l 162 (248)
T d2d1ya1 83 NAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQENAAYNASKGGLVNLTRSL 162 (248)
T ss_dssp CCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBCTTBHHHHHHHHHHHHHHHHH
T ss_pred eCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhcccccccccccccccccccccccccccchhHHHHHHHHHHHHHH
Confidence 84411 11224456667999999999988777777776544321 22223
Q ss_pred HHHHHhcCCCEEEEEcCcccCCC---------CCCc-ceeeecCCCCccccCHHHHHHHHHHHhhCCC--CCCcEEEEec
Q 021854 218 ESMLMASGIPYTIIRTGVLQNTP---------GGKQ-GFQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVN 285 (306)
Q Consensus 218 E~~l~~sgi~~tiiRPg~l~~~~---------~~~~-~~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~~~v~~ 285 (306)
...+...||++..|.||++.... .... ...+........+..++|||.++++++.+.. -.|+++.|.+
T Consensus 163 A~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~pedia~~v~fL~S~~s~~itG~~i~vDG 242 (248)
T d2d1ya1 163 ALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLFLASEKASFITGAILPVDG 242 (248)
T ss_dssp HHHHGGGTEEEEEEEECSBCCHHHHHHHC--------CHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred HHHhhhhCcEEEEEeeCCCCCchHHHHhhcCCCHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCCCCcEEEcCc
Confidence 33345689999999999864211 0000 0001111122335688999999999986432 4789999987
Q ss_pred CC
Q 021854 286 GE 287 (306)
Q Consensus 286 g~ 287 (306)
|-
T Consensus 243 G~ 244 (248)
T d2d1ya1 243 GM 244 (248)
T ss_dssp TG
T ss_pred Cc
Confidence 74
|
| >d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: R-specific alcohol dehydrogenase species: Lactobacillus brevis [TaxId: 1580]
Probab=99.71 E-value=6.6e-17 Score=142.42 Aligned_cols=191 Identities=14% Similarity=0.159 Sum_probs=131.9
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh-----cCCCceeeeccCCCHHHHHHHhc-------Cc
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-----FGTYVESMAGDASNKKFLKTALR-------GV 164 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~-----~~~~v~~v~~D~~d~~~l~~~~~-------~~ 164 (306)
..+|+++||||+++||+++++.|+++|++|++..|+.+++++. .+.++.++.+|++|+++++++++ .+
T Consensus 4 L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~i 83 (251)
T d1zk4a1 4 LDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPV 83 (251)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCCcEEEEEccCCCHHHHHHHHHHHHHHhCCc
Confidence 4689999999999999999999999999999999998764322 23578899999999888776654 56
Q ss_pred cEEEEcCCch------------------------------hhhcccccCCC-EEEEecCcccccCCCCcccccchHHHH-
Q 021854 165 RSIICPSEGF------------------------------ISNAGSLKGVQ-HVILLSQLSVYRGSGGIQALMKGNARK- 212 (306)
Q Consensus 165 d~vi~~~~g~------------------------------~~~~a~~~gvk-r~V~iSS~~~~~~~~~~~~~~~~~a~~- 212 (306)
|++|++++.. ....+++.+.. ++|++||..+..+......|..+++.-
T Consensus 84 DiLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~~~~~~~~~~Y~asKaal~ 163 (251)
T d1zk4a1 84 STLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAVR 163 (251)
T ss_dssp CEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCTTCHHHHHHHHHHH
T ss_pred eEEEeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeeccceeccCCCchhHHHHHHHHh
Confidence 9999884311 11223445544 889999998887777777776654322
Q ss_pred -HHH--HHHHHHHhcCCCEEEEEcCcccCC----CCCCcce-eeecCCCCccccCHHHHHHHHHHHhhCCC--CCCcEEE
Q 021854 213 -LAE--QDESMLMASGIPYTIIRTGVLQNT----PGGKQGF-QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFE 282 (306)
Q Consensus 213 -~~~--~aE~~l~~sgi~~tiiRPg~l~~~----~~~~~~~-~~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~~~ 282 (306)
+.+ +.|..+...||++..|.||++... ....... .........-+..++|||.++++++.+.. -.|+++.
T Consensus 164 ~lt~~lA~e~~l~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~s~~itG~~i~ 243 (251)
T d1zk4a1 164 IMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPGAEEAMSQRTKTPMGHIGEPNDIAYICVYLASNESKFATGSEFV 243 (251)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTSTTHHHHHTSTTTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred cchHHHHHHHhcCCCcEEEEEEeCCCCCChhHHhcCCHHHHHHHHhCCCCCCCcCHHHHHHHHHHHhCchhCCCcCcEEE
Confidence 212 223335577999999999986421 1110000 00011112335688999999999886433 4689999
Q ss_pred EecCC
Q 021854 283 VVNGE 287 (306)
Q Consensus 283 v~~g~ 287 (306)
|.+|-
T Consensus 244 vDGG~ 248 (251)
T d1zk4a1 244 VDGGY 248 (251)
T ss_dssp ESTTG
T ss_pred ECccc
Confidence 98774
|
| >d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Gluconate 5-dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=99.71 E-value=1.1e-16 Score=140.94 Aligned_cols=191 Identities=17% Similarity=0.097 Sum_probs=131.4
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhh-------hhcCCCceeeeccCCCHHHHHHHhc-------
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM-------ESFGTYVESMAGDASNKKFLKTALR------- 162 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~-------~~~~~~v~~v~~D~~d~~~l~~~~~------- 162 (306)
.++|+++||||+++||+++++.|+++|++|+++.|+.+++. +..+.++.++.+|++|+++++++++
T Consensus 3 l~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 82 (251)
T d1vl8a_ 3 LRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFG 82 (251)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 46899999999999999999999999999999999987632 2345678889999999888777653
Q ss_pred CccEEEEcCCch------------------------------hhhcccccCCCEEEEecCccccc-CCCCcccccchHHH
Q 021854 163 GVRSIICPSEGF------------------------------ISNAGSLKGVQHVILLSQLSVYR-GSGGIQALMKGNAR 211 (306)
Q Consensus 163 ~~d~vi~~~~g~------------------------------~~~~a~~~gvkr~V~iSS~~~~~-~~~~~~~~~~~~a~ 211 (306)
.+|++|++++.. ....+++.+-.++|++||..+.. +......|..+++.
T Consensus 83 ~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~~~~~~~~~~~~~Y~asKaa 162 (251)
T d1vl8a_ 83 KLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMPNISAYAASKGG 162 (251)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCCSSSCHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccchhccccCccccchHHHHHh
Confidence 579999984411 12234556777999999876543 44455566554332
Q ss_pred --HHHHHHHHHHHhcCCCEEEEEcCcccCCCCCC---cce---eeecCCCCccccCHHHHHHHHHHHhhCCC--CCCcEE
Q 021854 212 --KLAEQDESMLMASGIPYTIIRTGVLQNTPGGK---QGF---QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIF 281 (306)
Q Consensus 212 --~~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~---~~~---~~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~~ 281 (306)
.+.+.....+...||++..|.||++....... ... .+.......-+..++|||+++++++.+.. -.|+++
T Consensus 163 l~~lt~~lA~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~a~~itG~~i 242 (251)
T d1vl8a_ 163 VASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRIPLGRTGVPEDLKGVAVFLASEEAKYVTGQII 242 (251)
T ss_dssp HHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTCHHHHHHHHHTCTTSSCBCGGGGHHHHHHHHSGGGTTCCSCEE
T ss_pred HHHHHHHHHHHhcccCeEEEEEeeCcccCHHHHhccCCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCchhCCCcCcEE
Confidence 12233333355689999999999865332110 000 01111112335688999999999886533 468999
Q ss_pred EEecCC
Q 021854 282 EVVNGE 287 (306)
Q Consensus 282 ~v~~g~ 287 (306)
.|.+|-
T Consensus 243 ~vDGG~ 248 (251)
T d1vl8a_ 243 FVDGGW 248 (251)
T ss_dssp EESTTG
T ss_pred EeCcCe
Confidence 998763
|
| >d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus [TaxId: 274]
Probab=99.71 E-value=2.1e-16 Score=138.51 Aligned_cols=190 Identities=16% Similarity=0.104 Sum_probs=129.1
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcC-CCceeeeccCCCHHHHHHHhc-------CccEEE
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG-TYVESMAGDASNKKFLKTALR-------GVRSII 168 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~-~~v~~v~~D~~d~~~l~~~~~-------~~d~vi 168 (306)
..+|+++||||+++||++++++|+++|++|++..|+.+++++... .+.+.+.+|++|+++++++++ .+|++|
T Consensus 3 L~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilV 82 (242)
T d1ulsa_ 3 LKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERGFAEALAHLGRLDGVV 82 (242)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHHHSSCCEEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHhcCCceEEE
Confidence 467999999999999999999999999999999999887554322 367889999999988877653 569999
Q ss_pred EcCCch------------------------------hhhcccccCCCEEEEecCcccccCCCCcccccchHHH--HHHHH
Q 021854 169 CPSEGF------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--KLAEQ 216 (306)
Q Consensus 169 ~~~~g~------------------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~--~~~~~ 216 (306)
++++.. ....+++.+-.+++++||.. ..+..+...|..+++. .+.+.
T Consensus 83 nnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~~~i~~~ss~~-~~~~~~~~~Y~asKaal~~ltk~ 161 (242)
T d1ulsa_ 83 HYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRV-YLGNLGQANYAASMAGVVGLTRT 161 (242)
T ss_dssp ECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGG-GGCCTTCHHHHHHHHHHHHHHHH
T ss_pred ECCcccccCchhhCcchhhhccccccchhhhhhhhhccccccccccceeeeecccc-ccCCCCCcchHHHHHHHHHHHHH
Confidence 984411 11223445666777777754 4445556667554332 12222
Q ss_pred HHHHHHhcCCCEEEEEcCcccCCCCCCccee----eecCCCCccccCHHHHHHHHHHHhhCC--CCCCcEEEEecCC
Q 021854 217 DESMLMASGIPYTIIRTGVLQNTPGGKQGFQ----FEEGCAANGSLSKEDAAFICVEALESI--PQTGLIFEVVNGE 287 (306)
Q Consensus 217 aE~~l~~sgi~~tiiRPg~l~~~~~~~~~~~----~~~g~~~~~~Is~~DVA~~iv~aL~~~--~~~g~~~~v~~g~ 287 (306)
....+...||++..|.||++........... +........+..++|+|.++++++.+. .-.|+++.|.+|-
T Consensus 162 lA~ela~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~pl~R~~~pedia~~v~fL~S~~s~~itG~~i~vDGG~ 238 (242)
T d1ulsa_ 162 LALELGRWGIRVNTLAPGFIETRMTAKVPEKVREKAIAATPLGRAGKPLEVAYAALFLLSDESSFITGQVLFVDGGR 238 (242)
T ss_dssp HHHHHGGGTEEEEEEEECSBCCTTTSSSCHHHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred HHHHHhhhCcEEEEEeeCcccChhhhcCCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhchhhCCCCCcEEEECCCc
Confidence 3333556799999999998653322111100 011112233568899999999999643 3478999998764
|
| >d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sorbitol dehydrogenase species: Rhodobacter sphaeroides [TaxId: 1063]
Probab=99.71 E-value=6.9e-17 Score=142.68 Aligned_cols=191 Identities=14% Similarity=0.139 Sum_probs=133.7
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhh---hhcCCCceeeeccCCCHHHHHHHhc-------CccE
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM---ESFGTYVESMAGDASNKKFLKTALR-------GVRS 166 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~---~~~~~~v~~v~~D~~d~~~l~~~~~-------~~d~ 166 (306)
.++|+++||||+++||+++++.|+++|++|++..|+.++++ +.++.++..+.+|++|+++++++++ .+|+
T Consensus 3 L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iDi 82 (256)
T d1k2wa_ 3 LDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIGPAACAIALDVTDQASIDRCVAELLDRWGSIDI 82 (256)
T ss_dssp TTTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCceEEEEeeCCCHHHHHHHHHHHHHHhCCccE
Confidence 46899999999999999999999999999999999987643 3346688899999999988877664 5699
Q ss_pred EEEcCCch--------------------------h----hh-cccccCCCEEEEecCcccccCCCCcccccchHHHH--H
Q 021854 167 IICPSEGF--------------------------I----SN-AGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK--L 213 (306)
Q Consensus 167 vi~~~~g~--------------------------~----~~-~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~--~ 213 (306)
+|++++.. + .. ..++.+-.++|++||..+..+......|..+++.- +
T Consensus 83 lVnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~l 162 (256)
T d1k2wa_ 83 LVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGRRGEALVGVYCATKAAVISL 162 (256)
T ss_dssp EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHH
T ss_pred EEeecccccccccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccchhhccccccccchhhhhhHHHHH
Confidence 99984411 0 11 12233457999999999888777777776544321 2
Q ss_pred HHHHHHHHHhcCCCEEEEEcCcccCCCCC------------Ccce---eeecCCCCccccCHHHHHHHHHHHhhCCC--C
Q 021854 214 AEQDESMLMASGIPYTIIRTGVLQNTPGG------------KQGF---QFEEGCAANGSLSKEDAAFICVEALESIP--Q 276 (306)
Q Consensus 214 ~~~aE~~l~~sgi~~tiiRPg~l~~~~~~------------~~~~---~~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~ 276 (306)
.+.....+...||++..|.||++...... .... .+.......-+..++|||.++++++.+.. -
T Consensus 163 t~~lA~el~~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~~~p~evA~~v~fL~S~~a~~i 242 (256)
T d1k2wa_ 163 TQSAGLNLIRHGINVNAIAPGVVDGEHWDGVDAKFADYENLPRGEKKRQVGAAVPFGRMGRAEDLTGMAIFLATPEADYI 242 (256)
T ss_dssp HHHHHHHHGGGTEEEEEEEECCBCCTTHHHHHHHHHHHHTCCTTHHHHHHHHHSTTSSCBCHHHHHHHHHHTTSGGGTTC
T ss_pred HHHHHHHhcccCeEEEEEecCCCCchhhhhhhhhhhhhccCChHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhCCc
Confidence 23333345568999999999986533210 0000 00011112335688999999999886433 4
Q ss_pred CCcEEEEecCC
Q 021854 277 TGLIFEVVNGE 287 (306)
Q Consensus 277 ~g~~~~v~~g~ 287 (306)
.|+++.|.+|.
T Consensus 243 TG~~i~vDGG~ 253 (256)
T d1k2wa_ 243 VAQTYNVDGGN 253 (256)
T ss_dssp CSCEEEESTTS
T ss_pred cCceEEECcch
Confidence 68999998874
|
| >d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.70 E-value=1e-16 Score=140.43 Aligned_cols=191 Identities=15% Similarity=0.088 Sum_probs=133.4
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhc--CCCceeeeccCCCHHHHHHHhcC---ccEEEEcC
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF--GTYVESMAGDASNKKFLKTALRG---VRSIICPS 171 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~--~~~v~~v~~D~~d~~~l~~~~~~---~d~vi~~~ 171 (306)
..+|++|||||+++||++++++|+++|++|+++.|+.+++.+.. ..++..+.+|++|.+.++++++. +|++|+++
T Consensus 3 l~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~g~iDilVnnA 82 (242)
T d1cyda_ 3 FSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALGGIGPVDLLVNNA 82 (242)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCSEEEECC
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHHcCCCeEEEECC
Confidence 46899999999999999999999999999999999987754322 24688999999999999998874 59999984
Q ss_pred Cch--------------------------hh----hc-ccccCCCEEEEecCcccccCCCCcccccchHHH--HHHHHHH
Q 021854 172 EGF--------------------------IS----NA-GSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--KLAEQDE 218 (306)
Q Consensus 172 ~g~--------------------------~~----~~-a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~--~~~~~aE 218 (306)
+.. +. .. .++.+-.++|++||.....+......|..+++. .+.+...
T Consensus 83 g~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~asKaal~~lt~~lA 162 (242)
T d1cyda_ 83 ALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTKGAMTMLTKAMA 162 (242)
T ss_dssp CCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHH
T ss_pred ccccchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchhhccccCCccccccchHHHHHHHHHHHH
Confidence 411 11 11 223345689999999888777777777654432 1223333
Q ss_pred HHHHhcCCCEEEEEcCcccCCCC----CCcce--eeecCCCCccccCHHHHHHHHHHHhhCC--CCCCcEEEEecCC
Q 021854 219 SMLMASGIPYTIIRTGVLQNTPG----GKQGF--QFEEGCAANGSLSKEDAAFICVEALESI--PQTGLIFEVVNGE 287 (306)
Q Consensus 219 ~~l~~sgi~~tiiRPg~l~~~~~----~~~~~--~~~~g~~~~~~Is~~DVA~~iv~aL~~~--~~~g~~~~v~~g~ 287 (306)
..+...||++..|.||++..... ..... .+........+..++|||.++++++.+. .-.|+++.|.+|-
T Consensus 163 ~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~R~~~peeva~~v~fL~S~~s~~itG~~i~vDGG~ 239 (242)
T d1cyda_ 163 MELGPHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKERHPLRKFAEVEDVVNSILFLLSDRSASTSGGGILVDAGY 239 (242)
T ss_dssp HHHGGGTEEEEEEEECCBTTHHHHHHTCCHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGGGTTCCSSEEEESTTG
T ss_pred HHhCccCeecccCCCCCccCHHHHhhcCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCcCCceEEeCcch
Confidence 33556899999999998642210 00000 0011112234678999999999998643 2468999998774
|
| >d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: D(-)-3-hydroxybutyrate dehydrogenase species: Pseudomonas fragi [TaxId: 296]
Probab=99.70 E-value=9e-17 Score=142.15 Aligned_cols=191 Identities=15% Similarity=0.072 Sum_probs=131.3
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcch-h-------hhhcCCCceeeeccCCCHHHHHHHhc------
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-A-------MESFGTYVESMAGDASNKKFLKTALR------ 162 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~-~-------~~~~~~~v~~v~~D~~d~~~l~~~~~------ 162 (306)
+++|+++||||+++||++++++|+++|++|++..|+... + .+..+.++.++.+|++|+++++++++
T Consensus 2 L~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 81 (260)
T d1x1ta1 2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQM 81 (260)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred CCcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHh
Confidence 358999999999999999999999999999999997532 1 12235678899999999988877664
Q ss_pred -CccEEEEcCCch------------------------------hhhcccccCCCEEEEecCcccccCCCCcccccchHHH
Q 021854 163 -GVRSIICPSEGF------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR 211 (306)
Q Consensus 163 -~~d~vi~~~~g~------------------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~ 211 (306)
.+|++|++++.. ....+++.+-.++|++||..+..+......|..+++.
T Consensus 82 G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~asKaa 161 (260)
T d1x1ta1 82 GRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHG 161 (260)
T ss_dssp SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred CCCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCceEeecccccceeccCCcchhhhhhhh
Confidence 579999984411 1222455666799999999998877777777654432
Q ss_pred H--HHHHHHHHHHhcCCCEEEEEcCcccCCCCC--------Cccee--------eecCCCCccccCHHHHHHHHHHHhhC
Q 021854 212 K--LAEQDESMLMASGIPYTIIRTGVLQNTPGG--------KQGFQ--------FEEGCAANGSLSKEDAAFICVEALES 273 (306)
Q Consensus 212 ~--~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~--------~~~~~--------~~~g~~~~~~Is~~DVA~~iv~aL~~ 273 (306)
- +.+.....+...||++..|.||++...... ..... +.......-+..++|||.++++++.+
T Consensus 162 l~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~pediA~~v~fL~S~ 241 (260)
T d1x1ta1 162 VVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGGTAVFLASD 241 (260)
T ss_dssp HHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------CHHHHCTTCCCBCHHHHHHHHHHHHSG
T ss_pred HHHhHHHHHHHhchhCcEEEEEecCCCCChhhhhhhhhhhhhcCCChHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCh
Confidence 1 222222334567999999999986422110 00000 00111112356889999999999965
Q ss_pred C--CCCCcEEEEecCC
Q 021854 274 I--PQTGLIFEVVNGE 287 (306)
Q Consensus 274 ~--~~~g~~~~v~~g~ 287 (306)
. .-.|+++.|.+|-
T Consensus 242 ~a~~itG~~i~vDGG~ 257 (260)
T d1x1ta1 242 AAAQITGTTVSVDGGW 257 (260)
T ss_dssp GGTTCCSCEEEESTTG
T ss_pred hhCCCcCCEEEECcch
Confidence 3 3568999998774
|
| >d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.70 E-value=4.7e-17 Score=142.26 Aligned_cols=185 Identities=14% Similarity=0.119 Sum_probs=126.6
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhc-------CccEEEE
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR-------GVRSIIC 169 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~-------~~d~vi~ 169 (306)
.++|+++||||+++||++++++|+++|++|+++.|+.+... ++..+.+|++|+++++++++ .+|++|+
T Consensus 5 l~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~-----~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDiLVn 79 (237)
T d1uzma1 5 FVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPK-----GLFGVEVDVTDSDAVDRAFTAVEEHQGPVEVLVS 79 (237)
T ss_dssp CCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT-----TSEEEECCTTCHHHHHHHHHHHHHHHSSCSEEEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcchhc-----CceEEEEecCCHHHHHHHHHHHHHhcCCceEEEe
Confidence 46899999999999999999999999999999999886543 46778999999988776653 5699998
Q ss_pred cCCch------------------------------hhhcccccCCCEEEEecCcccccCCCCcccccchHHHH--HHHHH
Q 021854 170 PSEGF------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK--LAEQD 217 (306)
Q Consensus 170 ~~~g~------------------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~--~~~~a 217 (306)
+++.. ....+.+.+-.++|++||..+..+......|..+++.- +.+..
T Consensus 80 nAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~lt~~l 159 (237)
T d1uzma1 80 NAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGNQANYAASKAGVIGMARSI 159 (237)
T ss_dssp ECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-----CCHHHHHHHHHHHHHHHHH
T ss_pred eecccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccCCCceEEEcchhhccCCcccHHHHHHHHHHHHHHHHH
Confidence 84411 11224556777999999999887766677776554321 22223
Q ss_pred HHHHHhcCCCEEEEEcCcccCCCCC--Ccc--eeeecCCCCccccCHHHHHHHHHHHhhCCC--CCCcEEEEecC
Q 021854 218 ESMLMASGIPYTIIRTGVLQNTPGG--KQG--FQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVNG 286 (306)
Q Consensus 218 E~~l~~sgi~~tiiRPg~l~~~~~~--~~~--~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~~~v~~g 286 (306)
...+...||++..|.||++...... ... ..........-+..++|||.++++++.+.. -.|+++.|.+|
T Consensus 160 A~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~s~~itG~~i~vdGG 234 (237)
T d1uzma1 160 ARELSKANVTANVVAPGYIDTDMTRALDERIQQGALQFIPAKRVGTPAEVAGVVSFLASEDASYISGAVIPVDGG 234 (237)
T ss_dssp HHHHGGGTEEEEEEEECSBCCHHHHHSCHHHHHHHGGGCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred HhhhhcCCceeeeeeeCcCCChhhhccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCCcCCeEEECCC
Confidence 3335568999999999986422110 000 000011122346688999999999986533 46899999876
|
| >d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 7-alpha-hydroxysteroid dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=99.70 E-value=1.1e-16 Score=141.35 Aligned_cols=193 Identities=11% Similarity=0.088 Sum_probs=135.0
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhh------hcCCCceeeeccCCCHHHHHHHh-------c
Q 021854 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTAL-------R 162 (306)
Q Consensus 96 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~------~~~~~v~~v~~D~~d~~~l~~~~-------~ 162 (306)
...+|+++||||+++||++++++|+++|++|++..|+.+++++ ..+.++.++.+|++|++++++++ .
T Consensus 8 ~L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~~~g 87 (255)
T d1fmca_ 8 RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLG 87 (255)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 4568999999999999999999999999999999999876432 23457889999999988877655 3
Q ss_pred CccEEEEcCCch-----------------------------hhhcccccCCCEEEEecCcccccCCCCcccccchHHHH-
Q 021854 163 GVRSIICPSEGF-----------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK- 212 (306)
Q Consensus 163 ~~d~vi~~~~g~-----------------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~- 212 (306)
.+|++|++++.. ....+.+.+-.++|++||..+..+......|..+++.-
T Consensus 88 ~iDilvnnAG~~~~~~~e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Ii~isS~~~~~~~~~~~~Y~asKaal~ 167 (255)
T d1fmca_ 88 KVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAAS 167 (255)
T ss_dssp SCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHHHHHHHH
T ss_pred CCCEeeeCCcCCCCCcccCCHHHHHHHHHHHHHHhhhhHHHHHhhhccccccccccccccchhccccccccchhHHHHHH
Confidence 579999984421 11223445666899999999888777777776544321
Q ss_pred -HHHHHHHHHHhcCCCEEEEEcCcccCCC--CCCcce---eeecCCCCccccCHHHHHHHHHHHhhCCC--CCCcEEEEe
Q 021854 213 -LAEQDESMLMASGIPYTIIRTGVLQNTP--GGKQGF---QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVV 284 (306)
Q Consensus 213 -~~~~aE~~l~~sgi~~tiiRPg~l~~~~--~~~~~~---~~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~~~v~ 284 (306)
+.+.....+...||++..|.||++.... ...... .+.......-+..++|||.++++++.+.. -.|+++.|.
T Consensus 168 ~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~e~~~~~~~~~pl~R~g~pedvA~~v~fL~S~~s~~itG~~i~vD 247 (255)
T d1fmca_ 168 HLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTPIRRLGQPQDIANAALFLCSPAASWVSGQILTVS 247 (255)
T ss_dssp HHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCCHHHHHHHHHTCSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred HHHHHHHHHhCccCeEEEEeeeCcCcChHhhccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCCcCCEEEEC
Confidence 2233333455689999999999864211 000000 01111122335688999999999886433 478999999
Q ss_pred cCCc
Q 021854 285 NGEE 288 (306)
Q Consensus 285 ~g~~ 288 (306)
+|..
T Consensus 248 GG~~ 251 (255)
T d1fmca_ 248 GGGV 251 (255)
T ss_dssp TTSC
T ss_pred cCcc
Confidence 8864
|
| >d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), I [TaxId: 4076]
Probab=99.69 E-value=2e-16 Score=139.88 Aligned_cols=191 Identities=14% Similarity=0.111 Sum_probs=130.0
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhh------hcCCCceeeeccCCCHHHHHHHhc-------C
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTALR-------G 163 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~------~~~~~v~~v~~D~~d~~~l~~~~~-------~ 163 (306)
+.+|++|||||+++||++++++|+++|++|++.+|+++++++ ..+..+.++.+|++|.+.++++++ +
T Consensus 4 L~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~g 83 (258)
T d1ae1a_ 4 LKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDG 83 (258)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTS
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHHhCC
Confidence 468999999999999999999999999999999999876332 234567889999999988766553 2
Q ss_pred -ccEEEEcCCch------------------------------hhhcccccCCCEEEEecCcccccCCCCcccccchHHH-
Q 021854 164 -VRSIICPSEGF------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR- 211 (306)
Q Consensus 164 -~d~vi~~~~g~------------------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~- 211 (306)
.|+++++++.. ....+.+.+..++|++||..+..+......|..+++.
T Consensus 84 ~idilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~al 163 (258)
T d1ae1a_ 84 KLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASKGAI 163 (258)
T ss_dssp CCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCCTTCHHHHHHHHHH
T ss_pred CcEEEeccccccccCccccCCHHHHhhhhhhccccccccccccccccccccccccccccccccccccccchhHHHHHHHH
Confidence 58888874411 1122445677899999999998777676677544321
Q ss_pred -HHHHHHHHHHHhcCCCEEEEEcCcccCCCCC----Ccce------eeecCCCCccccCHHHHHHHHHHHhhCC--CCCC
Q 021854 212 -KLAEQDESMLMASGIPYTIIRTGVLQNTPGG----KQGF------QFEEGCAANGSLSKEDAAFICVEALESI--PQTG 278 (306)
Q Consensus 212 -~~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~----~~~~------~~~~g~~~~~~Is~~DVA~~iv~aL~~~--~~~g 278 (306)
.+.+..-..+...+|++..|.||++...... .... .+.......-+..++|||.+++.++.+. .-.|
T Consensus 164 ~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~plgR~~~pediA~~v~fL~S~~s~~itG 243 (258)
T d1ae1a_ 164 NQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQEVSALIAFLCFPAASYITG 243 (258)
T ss_dssp HHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHHSTTCSCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred HHHHHHHHHhcCcCcEEEEEEeeCcccCcchhhhhhhhhhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhChhhCCCcC
Confidence 1222223334457999999999986432110 0000 0001111233678999999999999643 3478
Q ss_pred cEEEEecCC
Q 021854 279 LIFEVVNGE 287 (306)
Q Consensus 279 ~~~~v~~g~ 287 (306)
+++.|.+|-
T Consensus 244 ~~i~vDGG~ 252 (258)
T d1ae1a_ 244 QIIWADGGF 252 (258)
T ss_dssp CEEEESTTG
T ss_pred cEEEeCCCe
Confidence 899998763
|
| >d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase species: Bacillus megaterium [TaxId: 1404]
Probab=99.68 E-value=2.1e-16 Score=139.98 Aligned_cols=192 Identities=13% Similarity=0.074 Sum_probs=131.5
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcch-hh------hhcCCCceeeeccCCCHHHHHHHhc------
Q 021854 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-AM------ESFGTYVESMAGDASNKKFLKTALR------ 162 (306)
Q Consensus 96 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~-~~------~~~~~~v~~v~~D~~d~~~l~~~~~------ 162 (306)
+..+|+++||||+++||++++++|+++|++|++..|+.+. ++ +..+.++..+.+|++|+++++++++
T Consensus 4 dL~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~ 83 (261)
T d1geea_ 4 DLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEF 83 (261)
T ss_dssp GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 4578999999999999999999999999999999998753 11 1234578889999999988877664
Q ss_pred -CccEEEEcCCch------------------------------hhhcccccC-CCEEEEecCcccccCCCCcccccchHH
Q 021854 163 -GVRSIICPSEGF------------------------------ISNAGSLKG-VQHVILLSQLSVYRGSGGIQALMKGNA 210 (306)
Q Consensus 163 -~~d~vi~~~~g~------------------------------~~~~a~~~g-vkr~V~iSS~~~~~~~~~~~~~~~~~a 210 (306)
.+|++|++++.. ....+.+.+ -.+||++||..+..+......|..+++
T Consensus 84 G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~~~~~~~~~~Y~asKa 163 (261)
T d1geea_ 84 GKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKG 163 (261)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred CCCCEeeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccccccccccccchhcccCccccccccCCc
Confidence 579999984411 112233344 346889999988777666667765443
Q ss_pred HH--HHHHHHHHHHhcCCCEEEEEcCcccCCCCCC---cce---eeecCCCCccccCHHHHHHHHHHHhhCCC--CCCcE
Q 021854 211 RK--LAEQDESMLMASGIPYTIIRTGVLQNTPGGK---QGF---QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLI 280 (306)
Q Consensus 211 ~~--~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~---~~~---~~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~ 280 (306)
.- +.+.....+...||++..|.||++....... ... .+.......-+..++|||.++++++.+.. -.|++
T Consensus 164 al~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~R~~~pediA~~v~fL~S~~s~~itG~~ 243 (261)
T d1geea_ 164 GMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMGYIGEPEEIAAVAAWLASSEASYVTGIT 243 (261)
T ss_dssp HHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHSHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred cchhhHHHHHHHhhhhCcEEEEEeeCcCcCHhHhhhcCCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCchhcCCcCCe
Confidence 21 2233333455689999999999864322100 000 01011112335688999999999986433 47899
Q ss_pred EEEecCC
Q 021854 281 FEVVNGE 287 (306)
Q Consensus 281 ~~v~~g~ 287 (306)
+.|.+|-
T Consensus 244 i~vDGG~ 250 (261)
T d1geea_ 244 LFADGGM 250 (261)
T ss_dssp EEESTTG
T ss_pred EEECCCe
Confidence 9999875
|
| >d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.68 E-value=2.5e-16 Score=139.33 Aligned_cols=191 Identities=15% Similarity=0.080 Sum_probs=120.0
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh------cCCCceeeeccCCCHHHHHHHhc-------C
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------G 163 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~~~-------~ 163 (306)
+++|+++||||+++||+++++.|+++|++|+++.|+.+++++. .+.++..+.+|++|.++++++++ +
T Consensus 6 LkgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g 85 (259)
T d1xq1a_ 6 LKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGG 85 (259)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTT
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHHHhCC
Confidence 4689999999999999999999999999999999998764322 23478899999999887766542 3
Q ss_pred -ccEEEEcCCch------------------------------hhhcccccCCCEEEEecCcccccCCCCcccccchHHHH
Q 021854 164 -VRSIICPSEGF------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK 212 (306)
Q Consensus 164 -~d~vi~~~~g~------------------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~ 212 (306)
+|++|++++.. ....+++.+-.++|++||..+..+......|..+++.-
T Consensus 86 ~idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~asKaal 165 (259)
T d1xq1a_ 86 KLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSATKGAL 165 (259)
T ss_dssp CCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC----------CCHHHHHHHHH
T ss_pred CcccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhcccccccccccccccccccccccccccccccccch
Confidence 69999884411 11224556778999999998877766666676544321
Q ss_pred --HHHHHHHHHHhcCCCEEEEEcCcccCCCCC----Ccce-eeecCCCCccccCHHHHHHHHHHHhhCC--CCCCcEEEE
Q 021854 213 --LAEQDESMLMASGIPYTIIRTGVLQNTPGG----KQGF-QFEEGCAANGSLSKEDAAFICVEALESI--PQTGLIFEV 283 (306)
Q Consensus 213 --~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~----~~~~-~~~~g~~~~~~Is~~DVA~~iv~aL~~~--~~~g~~~~v 283 (306)
+.+.....+...||++..|.||++...... .... .+.......-+..++|||.++++++.+. .-.|+++.|
T Consensus 166 ~~lt~~lA~e~~~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~s~~iTG~~i~v 245 (259)
T d1xq1a_ 166 NQLARNLACEWASDGIRANAVAPAVIATPLAEAVYDDEFKKVVISRKPLGRFGEPEEVSSLVAFLCMPAASYITGQTICV 245 (259)
T ss_dssp HHHHHHHHHHHGGGTCEEEEEECCSCC-------------------------CCGGGGHHHHHHHTSGGGTTCCSCEEEC
T ss_pred hhhhHHHHHHhcccCeEEEEeccCcccCHHhhhhchHHHHHHHHhCCCCCCCcCHHHHHHHHHHHhCchhcCCcCcEEEe
Confidence 223333345568999999999986422110 0000 0001111123557899999999988643 246888888
Q ss_pred ecCC
Q 021854 284 VNGE 287 (306)
Q Consensus 284 ~~g~ 287 (306)
.+|-
T Consensus 246 DGG~ 249 (259)
T d1xq1a_ 246 DGGL 249 (259)
T ss_dssp CCCE
T ss_pred CCCE
Confidence 8763
|
| >d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-glucose-4,6-dehydratase species: Yersinia pseudotuberculosis [TaxId: 633]
Probab=99.68 E-value=3.3e-16 Score=142.84 Aligned_cols=206 Identities=13% Similarity=0.048 Sum_probs=129.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh-----cCCCceeeeccCCCHHHHHHHhcCc--cEEEEc
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-----FGTYVESMAGDASNKKFLKTALRGV--RSIICP 170 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~-----~~~~v~~v~~D~~d~~~l~~~~~~~--d~vi~~ 170 (306)
.+|+||||||||+||++++++|+++|++|++++|+..+.... ...+++++.+|++|++.+.++++.+ |+|+|+
T Consensus 7 ~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~l~~~~~~~~~~~v~~~ 86 (356)
T d1rkxa_ 7 QGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREFQPEIVFHM 86 (356)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhhhcccCCeEEEeeccChHhhhhhhhhchhhhhhhh
Confidence 369999999999999999999999999999999988653321 2357999999999999999998754 889987
Q ss_pred CCch----------------------hhhcccccC-CCEEEEecCcccccCCCCc------ccccc-hHHHHHHHHHHHH
Q 021854 171 SEGF----------------------ISNAGSLKG-VQHVILLSQLSVYRGSGGI------QALMK-GNARKLAEQDESM 220 (306)
Q Consensus 171 ~~g~----------------------~~~~a~~~g-vkr~V~iSS~~~~~~~~~~------~~~~~-~~a~~~~~~aE~~ 220 (306)
++.. +.+++.+.+ .+.+++.|+...+...... ..+.+ ..+...+...|..
T Consensus 87 aa~~~~~~~~~~~~~~~~~Nv~g~~n~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~p~~~y~~~k~~~e~~ 166 (356)
T d1rkxa_ 87 AAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWIWGYRENEAMGGYDPYSNSKGCAELV 166 (356)
T ss_dssp CSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCSSSCBCTTSCBCCSSHHHHHHHHHHHH
T ss_pred hccccccccccCCccccccccccchhhhhhhhccccccccccccccccccccccccccccccccCCCCccccccccchhh
Confidence 4311 234455544 5555555555444321110 00100 0111112222222
Q ss_pred H-------------HhcCCCEEEEEcCcccCCCC---------------CCcceeeecCCCCccccCHHHHHHHHHHHhh
Q 021854 221 L-------------MASGIPYTIIRTGVLQNTPG---------------GKQGFQFEEGCAANGSLSKEDAAFICVEALE 272 (306)
Q Consensus 221 l-------------~~sgi~~tiiRPg~l~~~~~---------------~~~~~~~~~g~~~~~~Is~~DVA~~iv~aL~ 272 (306)
+ ...++.++++||+.+..... .+..+.+..+.....+++++|+|+++..++.
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~D~~~a~~~~~~ 246 (356)
T d1rkxa_ 167 TSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVIIRNPHAIRPWQHVLEPLSGYLLLAQ 246 (356)
T ss_dssp HHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCEECSCTTCEECCEETHHHHHHHHHHHH
T ss_pred hhHHhhhcccchhccccCceEEeccCCCeeCCCcchhhHHHHHHHHHHhCCCceEEeeccccccccccccccchhhhhhh
Confidence 2 13578899999987543221 1223334455556778999999999999887
Q ss_pred CCCCC----CcEEEEecC--C-cCHHHHHHHHHHHhhh
Q 021854 273 SIPQT----GLIFEVVNG--E-EKVSDWKKCFSRLMEK 303 (306)
Q Consensus 273 ~~~~~----g~~~~v~~g--~-~s~~d~~~l~~~l~~~ 303 (306)
.+... +...+...+ . .++.++.+.+....+.
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 284 (356)
T d1rkxa_ 247 KLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWGE 284 (356)
T ss_dssp HHHHTCGGGCSEEECCCCGGGCEEHHHHHHHHHHHHCT
T ss_pred hhcccccccccccccccccccccccchhhhhhHHHhCC
Confidence 64322 233333322 2 3667777776666543
|
| >d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Levodione reductase species: Corynebacterium aquaticum [TaxId: 144185]
Probab=99.68 E-value=4.4e-16 Score=137.66 Aligned_cols=191 Identities=13% Similarity=0.111 Sum_probs=133.1
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh--------cCCCceeeeccCCCHHHHHHHh-------
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES--------FGTYVESMAGDASNKKFLKTAL------- 161 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~--------~~~~v~~v~~D~~d~~~l~~~~------- 161 (306)
..+|+++||||+++||+++++.|+++|++|++..|+.+++++. .+.++..+.+|++|++++++++
T Consensus 2 l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~ 81 (258)
T d1iy8a_ 2 FTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERF 81 (258)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHHh
Confidence 3579999999999999999999999999999999998763321 1246788899999998887765
Q ss_pred cCccEEEEcCCc-----h--------------------------hhhcccccCCCEEEEecCcccccCCCCcccccchHH
Q 021854 162 RGVRSIICPSEG-----F--------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA 210 (306)
Q Consensus 162 ~~~d~vi~~~~g-----~--------------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a 210 (306)
..+|++|++++- . ....+++.+-.++|++||..+..+......|..+++
T Consensus 82 G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asKa 161 (258)
T d1iy8a_ 82 GRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAAAKH 161 (258)
T ss_dssp SCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBCSSBHHHHHHHH
T ss_pred CCCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCCCCcccccHhhccCCCCchHHHHHHH
Confidence 357999987431 0 112234566789999999998877777777766543
Q ss_pred HH--HHHHHHHHHHhcCCCEEEEEcCcccCCC--------CCCcc-e---eeecCCCCccccCHHHHHHHHHHHhhCC--
Q 021854 211 RK--LAEQDESMLMASGIPYTIIRTGVLQNTP--------GGKQG-F---QFEEGCAANGSLSKEDAAFICVEALESI-- 274 (306)
Q Consensus 211 ~~--~~~~aE~~l~~sgi~~tiiRPg~l~~~~--------~~~~~-~---~~~~g~~~~~~Is~~DVA~~iv~aL~~~-- 274 (306)
.- +.+.....+...||++..|.||++.... ..... . .+.......-+..++|||.++++++.+.
T Consensus 162 al~~lt~~lA~el~~~gIrVN~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~p~dvA~~v~fL~S~~s~ 241 (258)
T d1iy8a_ 162 GVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEAPEIAAVVAFLLSDDAS 241 (258)
T ss_dssp HHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTCTTCSCBCHHHHHHHHHHHTSGGGT
T ss_pred HHHHHHHHHHHHhCccCceEEEEeeCcccCHHHHHHHhhcCcccHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhc
Confidence 21 2222333355689999999999864211 00000 0 0111112233568999999999998643
Q ss_pred CCCCcEEEEecCC
Q 021854 275 PQTGLIFEVVNGE 287 (306)
Q Consensus 275 ~~~g~~~~v~~g~ 287 (306)
.-.|+++.|.+|-
T Consensus 242 ~itG~~i~VDGG~ 254 (258)
T d1iy8a_ 242 YVNATVVPIDGGQ 254 (258)
T ss_dssp TCCSCEEEESTTT
T ss_pred CCcCceEEcCcch
Confidence 3478999998875
|
| >d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Retinal dehydrogenase/reductase 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.67 E-value=1.9e-16 Score=139.44 Aligned_cols=190 Identities=14% Similarity=0.051 Sum_probs=131.1
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhc--CCCceeeeccCCCHHHHHHHhc-------CccEE
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF--GTYVESMAGDASNKKFLKTALR-------GVRSI 167 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~--~~~v~~v~~D~~d~~~l~~~~~-------~~d~v 167 (306)
..+|+++||||+++||+++++.|+++|++|+++.|+.+++++.. ..++..+.+|++|.++++++++ .+|++
T Consensus 4 l~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iDil 83 (250)
T d1ydea1 4 YAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDCV 83 (250)
T ss_dssp TTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcCCCeEEEccCCCHHHHHHHHHHHHHhcCCCCEE
Confidence 45899999999999999999999999999999999987754322 2468889999999988877654 56999
Q ss_pred EEcCCch-------------------------------hhhcccccCCCEEEEecCcccccCCCCcccccchHHHH--HH
Q 021854 168 ICPSEGF-------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK--LA 214 (306)
Q Consensus 168 i~~~~g~-------------------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~--~~ 214 (306)
|++++.. ....+++.+ .++|++||..+..+......|..+++.- +.
T Consensus 84 VnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~-G~Ii~isS~~~~~~~~~~~~Y~asKaal~~lt 162 (250)
T d1ydea1 84 VNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQ-GNVINISSLVGAIGQAQAVPYVATKGAVTAMT 162 (250)
T ss_dssp EECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCHHHHHCCTTCHHHHHHHHHHHHHH
T ss_pred EecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCC-CCCcccccccccccccCcchhHHHHhhHHHHH
Confidence 9884411 111233333 6999999999887777777776544321 22
Q ss_pred HHHHHHHHhcCCCEEEEEcCcccCCC-----C-CCc-ceee---ecCCCCccccCHHHHHHHHHHHhhCCC-CCCcEEEE
Q 021854 215 EQDESMLMASGIPYTIIRTGVLQNTP-----G-GKQ-GFQF---EEGCAANGSLSKEDAAFICVEALESIP-QTGLIFEV 283 (306)
Q Consensus 215 ~~aE~~l~~sgi~~tiiRPg~l~~~~-----~-~~~-~~~~---~~g~~~~~~Is~~DVA~~iv~aL~~~~-~~g~~~~v 283 (306)
+.....+...+|++..|.||++.... . ... ...+ .......-+..++|||.++++++.+.. -.|+++.|
T Consensus 163 ~~lA~e~a~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl~R~g~p~eva~~v~fL~Sda~~itG~~i~v 242 (250)
T d1ydea1 163 KALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPLGRMGQPAEVGAAAVFLASEANFCTGIELLV 242 (250)
T ss_dssp HHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHHHCTTCCSCEEEE
T ss_pred HHHHHHhcccCeEEEEEeeCCCCChhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCccCCCcCCeEEE
Confidence 22333355689999999999864211 0 000 0000 011122345689999999999886432 36899999
Q ss_pred ecCC
Q 021854 284 VNGE 287 (306)
Q Consensus 284 ~~g~ 287 (306)
.+|-
T Consensus 243 DGG~ 246 (250)
T d1ydea1 243 TGGA 246 (250)
T ss_dssp STTT
T ss_pred CCCc
Confidence 8764
|
| >d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) species: Salmonella enterica serovar typhimurium [TaxId: 90371]
Probab=99.67 E-value=3.1e-16 Score=138.76 Aligned_cols=192 Identities=20% Similarity=0.161 Sum_probs=130.0
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCc--cEEEEcCCch---
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGV--RSIICPSEGF--- 174 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~--d~vi~~~~g~--- 174 (306)
|+||||||||+||++++++|.+.|+.| .+.+... .+.+|+.|.+.+++++++. |+|||+++-.
T Consensus 1 MKILItG~tGfiG~~l~~~L~~~g~~v-~~~~~~~-----------~~~~Dl~~~~~~~~~i~~~~~D~Vih~Aa~~~~~ 68 (298)
T d1n2sa_ 1 MNILLFGKTGQVGWELQRSLAPVGNLI-ALDVHSK-----------EFCGDFSNPKGVAETVRKLRPDVIVNAAAHTAVD 68 (298)
T ss_dssp CEEEEECTTSHHHHHHHHHTTTTSEEE-EECTTCS-----------SSCCCTTCHHHHHHHHHHHCCSEEEECCCCCCHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEE-EEECCCc-----------cccCcCCCHHHHHHHHHHcCCCEEEEeccccccc
Confidence 689999999999999999999888654 4444331 1347999999999999755 9999985410
Q ss_pred -------------------hhhcccccCCCEEEEecCcccccCCCCc------ccccchHHHHHHHHHHHHHHhcCCCEE
Q 021854 175 -------------------ISNAGSLKGVQHVILLSQLSVYRGSGGI------QALMKGNARKLAEQDESMLMASGIPYT 229 (306)
Q Consensus 175 -------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~------~~~~~~~a~~~~~~aE~~l~~sgi~~t 229 (306)
+.+++++.++ +++++||..++...... .....+.+...+..+|.++......+.
T Consensus 69 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~~ss~~~~~~~~~~~~~E~~~~~p~~~y~~~k~~~e~~~~~~~~~~~ 147 (298)
T d1n2sa_ 69 KAESEPELAQLLNATSVEAIAKAANETGA-WVVHYSTDYVFPGTGDIPWQETDATSPLNVYGKTKLAGEKALQDNCPKHL 147 (298)
T ss_dssp HHTTCHHHHHHHHTHHHHHHHHHHTTTTC-EEEEEEEGGGSCCCTTCCBCTTSCCCCSSHHHHHHHHHHHHHHHHCSSEE
T ss_pred ccccCccccccccccccccchhhhhcccc-ccccccccccccCCCCCCCccccccCCCchHhhhhhhhhhhHHhhhcccc
Confidence 3445555664 67788887766432211 011112344556778888988888888
Q ss_pred EEEcCcccCCCCC-----------CcceeeecCCCCccccCHHHHHHHHHHHhh---CCCCCCcEEEEecCC-cCHHHHH
Q 021854 230 IIRTGVLQNTPGG-----------KQGFQFEEGCAANGSLSKEDAAFICVEALE---SIPQTGLIFEVVNGE-EKVSDWK 294 (306)
Q Consensus 230 iiRPg~l~~~~~~-----------~~~~~~~~g~~~~~~Is~~DVA~~iv~aL~---~~~~~g~~~~v~~g~-~s~~d~~ 294 (306)
++|++.+....+. ........++....+++.+|+++++..++. .....+.+|++++++ .+..+++
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~i~~~~~~~~~~~~~n~~~~~~~~~~~~~ 227 (298)
T d1n2sa_ 148 IFRTSWVYAGKGNNFAKTMLRLAKERQTLSVINDQYGAPTGAELLADCTAHAIRVALNKPEVAGLYHLVAGGTTTWHDYA 227 (298)
T ss_dssp EEEECSEECSSSCCHHHHHHHHHHHCSEEEEECSCEECCEEHHHHHHHHHHHHHHHHHCGGGCEEEECCCBSCEEHHHHH
T ss_pred cccccceeeccCCccchhhhhhhcccceeecccceeecccccchHHHHHHHHHhhhhccccccccccccCCCceecHHHH
Confidence 8887774433221 111122244555678999999999988875 233456799999855 5788998
Q ss_pred HHHHHHhhhc
Q 021854 295 KCFSRLMEKT 304 (306)
Q Consensus 295 ~l~~~l~~~~ 304 (306)
+++.++..+.
T Consensus 228 ~~i~~~~~~~ 237 (298)
T d1n2sa_ 228 ALVFDEARKA 237 (298)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHhhhhcc
Confidence 8887776553
|
| >d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 15-hydroxyprostaglandin dehydrogenase, PGDH species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.67 E-value=1.4e-16 Score=140.55 Aligned_cols=190 Identities=15% Similarity=0.136 Sum_probs=131.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhh-------hc-CCCceeeeccCCCHHHHHHHhc-------
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME-------SF-GTYVESMAGDASNKKFLKTALR------- 162 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~-------~~-~~~v~~v~~D~~d~~~l~~~~~------- 162 (306)
.+|+++||||+++||+++++.|+++|++|+++.|+.++..+ .. +.++.++.+|++|+++++++++
T Consensus 2 ~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G 81 (254)
T d2gdza1 2 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFG 81 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHcC
Confidence 47999999999999999999999999999999999876322 11 2367889999999988877663
Q ss_pred CccEEEEcCCch----------------------hhhccccc---CCCEEEEecCcccccCCCCcccccchHHHH--HHH
Q 021854 163 GVRSIICPSEGF----------------------ISNAGSLK---GVQHVILLSQLSVYRGSGGIQALMKGNARK--LAE 215 (306)
Q Consensus 163 ~~d~vi~~~~g~----------------------~~~~a~~~---gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~--~~~ 215 (306)
.+|++|++++.. ....+.+. .-.+||++||..+..+......|..+++.- +.+
T Consensus 82 ~iDilVnnAg~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~ltr 161 (254)
T d2gdza1 82 RLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTR 161 (254)
T ss_dssp CCCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHH
T ss_pred CcCeecccccccccccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhccCCCCccchHHHHHHHHHHHH
Confidence 579999984421 11122222 235799999999888777777776654321 222
Q ss_pred --HHHHHHHhcCCCEEEEEcCcccCCC----CCC----ccee----eecCCCCccccCHHHHHHHHHHHhhCCCCCCcEE
Q 021854 216 --QDESMLMASGIPYTIIRTGVLQNTP----GGK----QGFQ----FEEGCAANGSLSKEDAAFICVEALESIPQTGLIF 281 (306)
Q Consensus 216 --~aE~~l~~sgi~~tiiRPg~l~~~~----~~~----~~~~----~~~g~~~~~~Is~~DVA~~iv~aL~~~~~~g~~~ 281 (306)
..+..+...||++..|.||++.... ... .... +........+..++|||+++++++.++.-.|+++
T Consensus 162 s~ala~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~fL~s~~~itG~~i 241 (254)
T d2gdza1 162 SAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPPLIANGLITLIEDDALNGAIM 241 (254)
T ss_dssp HHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHHHHHHHCCBCHHHHHHHHHHHHHCTTCSSCEE
T ss_pred HHHHHHHhcCCCEEEEEEEcCCCCChhhhhccccccccccHHHHHHHHhcCCCCCCcCHHHHHHHHHHHHcCCCCCCCEE
Confidence 1233456789999999999864211 000 0000 0000011235688999999999998776789999
Q ss_pred EEecCC
Q 021854 282 EVVNGE 287 (306)
Q Consensus 282 ~v~~g~ 287 (306)
.|.+|.
T Consensus 242 ~VdGG~ 247 (254)
T d2gdza1 242 KITTSK 247 (254)
T ss_dssp EEETTT
T ss_pred EECCCC
Confidence 999875
|
| >d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3beta/17beta hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=99.67 E-value=4.8e-16 Score=136.99 Aligned_cols=190 Identities=14% Similarity=0.097 Sum_probs=130.2
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhh---hhcCCCceeeeccCCCHHHHHHHhc-------CccE
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM---ESFGTYVESMAGDASNKKFLKTALR-------GVRS 166 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~---~~~~~~v~~v~~D~~d~~~l~~~~~-------~~d~ 166 (306)
..+|+++||||+++||+++++.|+++|++|++..|+.++++ +..+.+..++.+|++|.++++++++ .+|+
T Consensus 4 L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iDi 83 (253)
T d1hxha_ 4 LQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNV 83 (253)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEeecCCHHHHHHHHHHHHHHhCCCCe
Confidence 46899999999999999999999999999999999987643 3346678889999999887776553 5699
Q ss_pred EEEcCCch------------------------------hhhcccccCCCEEEEecCcccccCCCCcccccchHHH--HHH
Q 021854 167 IICPSEGF------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--KLA 214 (306)
Q Consensus 167 vi~~~~g~------------------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~--~~~ 214 (306)
+|++++.. ....+++.+ .++|++||..+..+......|..+++. .+.
T Consensus 84 lVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-G~Iv~isS~~~~~~~~~~~~Y~asKaal~~lt 162 (253)
T d1hxha_ 84 LVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG-GSIINMASVSSWLPIEQYAGYSASKAAVSALT 162 (253)
T ss_dssp EEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC-EEEEEECCGGGTSCCTTBHHHHHHHHHHHHHH
T ss_pred EEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcC-CceecccchhhhcCccccccccchhHHHHHHH
Confidence 99984411 112233334 789999999988877777777665432 122
Q ss_pred HHHHHHHHh--cCCCEEEEEcCcccCC------CCC-Ccceee-ecCC-CCccccCHHHHHHHHHHHhhCCC--CCCcEE
Q 021854 215 EQDESMLMA--SGIPYTIIRTGVLQNT------PGG-KQGFQF-EEGC-AANGSLSKEDAAFICVEALESIP--QTGLIF 281 (306)
Q Consensus 215 ~~aE~~l~~--sgi~~tiiRPg~l~~~------~~~-~~~~~~-~~g~-~~~~~Is~~DVA~~iv~aL~~~~--~~g~~~ 281 (306)
+.....+.. .+|++..|.||++... +.. .+.... .... ....+..++|||+++++++.+.. -.|+++
T Consensus 163 ~~lA~e~~~~g~~IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~gr~~~pedvA~~v~fL~S~~s~~itG~~i 242 (253)
T d1hxha_ 163 RAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGVSKEMVLHDPKLNRAGRAYMPERIAQLVLFLASDESSVMSGSEL 242 (253)
T ss_dssp HHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTTCCHHHHBCBTTTBTTCCEECHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred HHHHHHHhhcCCCEEEEEEeECCCcCHhHHhhCcchhhHHHHHhCccccccCCCCCHHHHHHHHHHHhChhhCCCcCcEE
Confidence 222222333 4599999999985421 111 111110 0111 11235678999999999986433 468999
Q ss_pred EEecCC
Q 021854 282 EVVNGE 287 (306)
Q Consensus 282 ~v~~g~ 287 (306)
.|.+|-
T Consensus 243 ~VDGG~ 248 (253)
T d1hxha_ 243 HADNSI 248 (253)
T ss_dssp EESSSC
T ss_pred EECccH
Confidence 998764
|
| >d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Xylitol dehydrogenase species: Gluconobacter oxydans [TaxId: 442]
Probab=99.67 E-value=1.7e-16 Score=140.48 Aligned_cols=190 Identities=14% Similarity=0.093 Sum_probs=131.8
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhh------hcCCCceeeeccCCCHHHHHHHhc-------C
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTALR-------G 163 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~------~~~~~v~~v~~D~~d~~~l~~~~~-------~ 163 (306)
..+|+++||||+++||++++++|+++|++|+++.|+.+++++ ..+.++..+.+|++|.++++++++ .
T Consensus 3 L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 82 (260)
T d1zema1 3 FNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGK 82 (260)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 468999999999999999999999999999999999876432 124578899999999888776653 5
Q ss_pred ccEEEEcCCch-------------------------------hhhcccccCCCEEEEecCcccccCCCCcccccchHHHH
Q 021854 164 VRSIICPSEGF-------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK 212 (306)
Q Consensus 164 ~d~vi~~~~g~-------------------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~ 212 (306)
+|++|++++.. ....+.+.+-.++|++||..+..+......|..+++.-
T Consensus 83 iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~~~~~Y~asKaal 162 (260)
T d1zema1 83 IDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSKGAI 162 (260)
T ss_dssp CCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCTTBHHHHHHHHHH
T ss_pred CCeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhcCCCCCeeechhhccCCcchHHHHHHHHHH
Confidence 79999874310 11123445667999999999888777777776554321
Q ss_pred --HHHHHHHHHHhcCCCEEEEEcCcccCCCC------------CC----ccee----eecCCCCccccCHHHHHHHHHHH
Q 021854 213 --LAEQDESMLMASGIPYTIIRTGVLQNTPG------------GK----QGFQ----FEEGCAANGSLSKEDAAFICVEA 270 (306)
Q Consensus 213 --~~~~aE~~l~~sgi~~tiiRPg~l~~~~~------------~~----~~~~----~~~g~~~~~~Is~~DVA~~iv~a 270 (306)
+.+.....+...||++..|.||++..... .. .... +.......-+..++|||.+++++
T Consensus 163 ~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~pedvA~~v~fL 242 (260)
T d1zema1 163 IALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGDINEIPGVVAFL 242 (260)
T ss_dssp HHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTSTTSSCBCGGGSHHHHHHH
T ss_pred HHHHHHHHHHhhhhCCEEEEeccCcccCcchhhcchhhhhhhcccccccCHHHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence 22233333556799999999998653210 00 0000 00111122356789999999999
Q ss_pred hhCCC--CCCcEEEEecC
Q 021854 271 LESIP--QTGLIFEVVNG 286 (306)
Q Consensus 271 L~~~~--~~g~~~~v~~g 286 (306)
+.+.. -.|+++.|.+|
T Consensus 243 ~S~~s~~itG~~i~VDGG 260 (260)
T d1zema1 243 LGDDSSFMTGVNLPIAGG 260 (260)
T ss_dssp HSGGGTTCCSCEEEESCC
T ss_pred hCchhcCccCCeEEeCCC
Confidence 96532 46889988765
|
| >d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Rhizome secoisolariciresinol dehydrogenase species: Mayapple (Podophyllum peltatum) [TaxId: 35933]
Probab=99.67 E-value=2e-15 Score=133.89 Aligned_cols=191 Identities=9% Similarity=0.073 Sum_probs=129.5
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh---c--CCCceeeeccCCCHHHHHHHhc-------Cc
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---F--GTYVESMAGDASNKKFLKTALR-------GV 164 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~---~--~~~v~~v~~D~~d~~~l~~~~~-------~~ 164 (306)
..+|++|||||+++||++++++|+++|++|+++.|+.+++++. . ...+.++.+|++|+++++++++ .+
T Consensus 4 L~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 83 (268)
T d2bgka1 4 LQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKL 83 (268)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCCceEEEEccCCCHHHHHHHHHHHHHHcCCc
Confidence 4689999999999999999999999999999999998764322 2 2357788999999988877664 57
Q ss_pred cEEEEcCCch--------------------------------hhhcccccCCCEEEEecCcccccCCCCcc-cccchHHH
Q 021854 165 RSIICPSEGF--------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQ-ALMKGNAR 211 (306)
Q Consensus 165 d~vi~~~~g~--------------------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~~-~~~~~~a~ 211 (306)
|++|++++.. ....+.+.+-.++|++||..+.....+.. .|..+++.
T Consensus 84 D~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~~Y~asKaa 163 (268)
T d2bgka1 84 DIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYTATKHA 163 (268)
T ss_dssp CEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCTTSCHHHHHHHHH
T ss_pred ceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcCCCCccccccccccccccccccccchhHHH
Confidence 9999874310 11224456677999999988776544433 45433221
Q ss_pred --HHHHHHHHHHHhcCCCEEEEEcCcccCCCCCC----ccee----ee-cCCCCccccCHHHHHHHHHHHhhCCC--CCC
Q 021854 212 --KLAEQDESMLMASGIPYTIIRTGVLQNTPGGK----QGFQ----FE-EGCAANGSLSKEDAAFICVEALESIP--QTG 278 (306)
Q Consensus 212 --~~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~----~~~~----~~-~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g 278 (306)
.+.+.....+...||++..|.||++....... .... .. .......+..++|||.++++++.+.. -.|
T Consensus 164 l~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~gr~~~pedvA~~v~fL~S~~s~~itG 243 (268)
T d2bgka1 164 VLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAEDVADAVAYLAGDESKYVSG 243 (268)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTCSSCSCCCCHHHHHHHHHHHHSGGGTTCCS
T ss_pred HHhCHHHHHHHhChhCeEEEecCCCCccChHHhhhhcCCHHHHHHHHHhccccCCCCcCHHHHHHHHHHHhChhhCCccC
Confidence 12222223345689999999999864322110 0000 00 11112346789999999999996533 468
Q ss_pred cEEEEecCC
Q 021854 279 LIFEVVNGE 287 (306)
Q Consensus 279 ~~~~v~~g~ 287 (306)
+++.|.+|-
T Consensus 244 q~i~VDGG~ 252 (268)
T d2bgka1 244 LNLVIDGGY 252 (268)
T ss_dssp CEEEESTTG
T ss_pred ceEEECcCc
Confidence 999999875
|
| >d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=99.66 E-value=2.6e-16 Score=138.04 Aligned_cols=187 Identities=15% Similarity=0.137 Sum_probs=127.9
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEec-Ccchhh------hhcCCCceeeeccCCCHHHHHHHhc-------Ccc
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVK-DKRNAM------ESFGTYVESMAGDASNKKFLKTALR-------GVR 165 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R-~~~~~~------~~~~~~v~~v~~D~~d~~~l~~~~~-------~~d 165 (306)
+.||||||+++||++++++|+++|++|++.++ +.+.++ +..+.++.++.+|++|+++++++++ .+|
T Consensus 2 pV~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD 81 (244)
T d1edoa_ 2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTID 81 (244)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCS
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence 57999999999999999999999999998755 444322 2245678899999999988877654 569
Q ss_pred EEEEcCCch------------------------------hhhcccccCCCEEEEecCcccccCCCCcccccchHHH--HH
Q 021854 166 SIICPSEGF------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--KL 213 (306)
Q Consensus 166 ~vi~~~~g~------------------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~--~~ 213 (306)
++|++++.. ....+++.+-.++|++||..+..+......|..+++. .+
T Consensus 82 iLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~~~~~Y~asKaal~~l 161 (244)
T d1edoa_ 82 VVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGF 161 (244)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHHHHHHH
T ss_pred ccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcChhhcCCCCCCHHHHHHHHHHHHC
Confidence 999984411 1222445666799999999988877777777665432 12
Q ss_pred HHHHHHHHHhcCCCEEEEEcCcccCCCC--CCcc--eeeecCCCCccccCHHHHHHHHHHHhhCCC---CCCcEEEEecC
Q 021854 214 AEQDESMLMASGIPYTIIRTGVLQNTPG--GKQG--FQFEEGCAANGSLSKEDAAFICVEALESIP---QTGLIFEVVNG 286 (306)
Q Consensus 214 ~~~aE~~l~~sgi~~tiiRPg~l~~~~~--~~~~--~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~---~~g~~~~v~~g 286 (306)
.+.....+...||++..|.||++..... .... ..+.......-+..++|||.+++++...+. -.|+++.|.+|
T Consensus 162 tk~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~pl~R~~~p~dvA~~v~fLa~S~~a~~itG~~i~vdGG 241 (244)
T d1edoa_ 162 SKTAAREGASRNINVNVVCPGFIASDMTAKLGEDMEKKILGTIPLGRTGQPENVAGLVEFLALSPAASYITGQAFTIDGG 241 (244)
T ss_dssp HHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCHHHHHHHHTSCTTCSCBCHHHHHHHHHHHHHCSGGGGCCSCEEEESTT
T ss_pred hHHHHHHHhhhCcEEEEEecceeccHHHHHhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHHCCchhcCCcCCeEEeCCC
Confidence 2333344556899999999998642210 0000 001111122346788999999999854433 46889998876
|
| >d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), II [TaxId: 4076]
Probab=99.66 E-value=2.7e-16 Score=139.07 Aligned_cols=191 Identities=15% Similarity=0.086 Sum_probs=131.0
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh------cCCCceeeeccCCCHHHHHHHh-------c-
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTAL-------R- 162 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~~-------~- 162 (306)
+.+|+++||||+++||+++++.|+++|++|++..|+.+++++. .+.++.++.+|++|++++++++ .
T Consensus 6 L~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~ 85 (259)
T d2ae2a_ 6 LEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHG 85 (259)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTT
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHHhCC
Confidence 4689999999999999999999999999999999998774322 2356788999999988777654 2
Q ss_pred CccEEEEcCCch------------------------------hhhcccccCCCEEEEecCcccccCCCCcccccchHHHH
Q 021854 163 GVRSIICPSEGF------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK 212 (306)
Q Consensus 163 ~~d~vi~~~~g~------------------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~ 212 (306)
.+|++|++++.. ....+++.+-.++|++||..+..+......|..+++.-
T Consensus 86 ~idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asKaal 165 (259)
T d2ae2a_ 86 KLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKGAM 165 (259)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCCTTCHHHHHHHHHH
T ss_pred CceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhcccccccccccccccccccccchHHHHHHH
Confidence 379999984411 11223445667999999998887776766775543321
Q ss_pred --HHHHHHHHHHhcCCCEEEEEcCcccCCC-----CC---Ccce-eeecCCCCccccCHHHHHHHHHHHhhCCC--CCCc
Q 021854 213 --LAEQDESMLMASGIPYTIIRTGVLQNTP-----GG---KQGF-QFEEGCAANGSLSKEDAAFICVEALESIP--QTGL 279 (306)
Q Consensus 213 --~~~~aE~~l~~sgi~~tiiRPg~l~~~~-----~~---~~~~-~~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~ 279 (306)
+.+.....+...+|++..|.||++.... .. .... .+.......-+..++|||.++++++.+.. -.|+
T Consensus 166 ~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~pl~R~g~pedvA~~v~fL~S~~s~~itG~ 245 (259)
T d2ae2a_ 166 DQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAAMVAFLCFPAASYVTGQ 245 (259)
T ss_dssp HHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTSTTCSCBCHHHHHHHHHHHHSGGGTTCCSC
T ss_pred HHHHHHHHHHhCcCceEEEEeeeCcccCHHHHhhhhchhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhCCCcCc
Confidence 2222223344579999999999864211 00 0000 00011122335688999999999986433 4689
Q ss_pred EEEEecCC
Q 021854 280 IFEVVNGE 287 (306)
Q Consensus 280 ~~~v~~g~ 287 (306)
++.|.+|-
T Consensus 246 ~i~VDGG~ 253 (259)
T d2ae2a_ 246 IIYVDGGL 253 (259)
T ss_dssp EEEESTTG
T ss_pred EEEECCCe
Confidence 99998774
|
| >d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermotoga maritima [TaxId: 2336]
Probab=99.66 E-value=1.5e-15 Score=132.13 Aligned_cols=187 Identities=15% Similarity=0.098 Sum_probs=130.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCC-HHHHHHHhcCccEEEEcCCch--
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASN-KKFLKTALRGVRSIICPSEGF-- 174 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d-~~~l~~~~~~~d~vi~~~~g~-- 174 (306)
++|++|||||+++||++++++|+++|++|++..|+.+.+++. ..+++.+|+++ .+.+.+.+..+|++|++++..
T Consensus 3 kgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~l~~~---~~~~~~~Dv~~~~~~~~~~~g~iD~lVnnAG~~~~ 79 (234)
T d1o5ia_ 3 RDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRS---GHRYVVCDLRKDLDLLFEKVKEVDILVLNAGGPKA 79 (234)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHT---CSEEEECCTTTCHHHHHHHSCCCSEEEECCCCCCC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHhc---CCcEEEcchHHHHHHHHHHhCCCcEEEecccccCC
Confidence 579999999999999999999999999999999998775532 45678899986 456667778899999984411
Q ss_pred ----------------------------hhhcccccCCCEEEEecCcccccCCCCcccccchHHH--HHHHHHHHHHHhc
Q 021854 175 ----------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--KLAEQDESMLMAS 224 (306)
Q Consensus 175 ----------------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~--~~~~~aE~~l~~s 224 (306)
....+++.+-.++|++||..+..+......|..+++. .+.+.....+...
T Consensus 80 ~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~G~ii~i~S~~~~~~~~~~~~Y~asKaal~~ltk~lA~ela~~ 159 (234)
T d1o5ia_ 80 GFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIENLYTSNSARMALTGFLKTLSFEVAPY 159 (234)
T ss_dssp BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGG
T ss_pred cchhhhhhHHHHHHhhhhhhhhhhhhhcccccccccccccccccccccccccccccccchhHHHHHHHHHHHHHHHhccc
Confidence 1122445667799999998887777666667544321 1223333345567
Q ss_pred CCCEEEEEcCcccCCCCCC----c-ceeeecCCCCccccCHHHHHHHHHHHhhCCC--CCCcEEEEecCC
Q 021854 225 GIPYTIIRTGVLQNTPGGK----Q-GFQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVNGE 287 (306)
Q Consensus 225 gi~~tiiRPg~l~~~~~~~----~-~~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~~~v~~g~ 287 (306)
||++..|.||++....... . ...+........+..++|||.++++++.+.. -.|+++.|.+|-
T Consensus 160 gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~pl~R~~~pediA~~v~fL~S~~s~~itG~~i~vDGG~ 229 (234)
T d1o5ia_ 160 GITVNCVAPGWTETERVKELLSEEKKKQVESQIPMRRMAKPEEIASVVAFLCSEKASYLTGQTIVVDGGL 229 (234)
T ss_dssp TEEEEEEEECSBCCTTHHHHSCHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred CeEEeecccCccchhhhhhhcCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhChhhcCCcCcEEEECccc
Confidence 9999999999865332100 0 0001111222346689999999999986433 468999998774
|
| >d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 17-beta-hydroxysteroid dehydrogenase type XI species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.66 E-value=4.3e-16 Score=136.65 Aligned_cols=173 Identities=13% Similarity=0.127 Sum_probs=121.6
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhh------hcCCCceeeeccCCCHHHHHHHhc-------C
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTALR-------G 163 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~------~~~~~v~~v~~D~~d~~~l~~~~~-------~ 163 (306)
..+|+++||||+++||++++++|+++|++|++++|+.+++++ ..+.++..+.+|++|.++++.+++ .
T Consensus 5 l~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~ 84 (244)
T d1yb1a_ 5 VTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGD 84 (244)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCC
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCC
Confidence 468999999999999999999999999999999999987432 234578899999999988877653 5
Q ss_pred ccEEEEcCCch------------------------------hhhcccccCCCEEEEecCcccccCCCCcccccchHHHH-
Q 021854 164 VRSIICPSEGF------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK- 212 (306)
Q Consensus 164 ~d~vi~~~~g~------------------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~- 212 (306)
+|++|++++.. ....+.+.+-.++|++||..+..+......|..+++.-
T Consensus 85 idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~asKaal~ 164 (244)
T d1yb1a_ 85 VSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYCSSKFAAV 164 (244)
T ss_dssp CSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCHHHHHHHHHHHHHHH
T ss_pred CceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecchhcCCCCCcHHHHHHHHHHH
Confidence 79999884411 12224566778999999999887766666675544321
Q ss_pred -HHHHHHHHHHh---cCCCEEEEEcCcccCCCCCCcceeeecCCCCccccCHHHHHHHHHHHhhCCC
Q 021854 213 -LAEQDESMLMA---SGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIP 275 (306)
Q Consensus 213 -~~~~aE~~l~~---sgi~~tiiRPg~l~~~~~~~~~~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~ 275 (306)
+.+.....+.. .||.++.|.||++.......... .....+.++|+|+.++..+..+.
T Consensus 165 ~~~~~La~El~~~~~~gI~V~~i~PG~v~T~~~~~~~~------~~~~~~~pe~va~~i~~~~~~~~ 225 (244)
T d1yb1a_ 165 GFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKNPST------SLGPTLEPEEVVNRLMHGILTEQ 225 (244)
T ss_dssp HHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTCTHH------HHCCCCCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHhhcCCCEEEEEEEcCCCCChhhhCcCc------cccCCCCHHHHHHHHHHHHhcCC
Confidence 11211222322 58999999999854322111110 11245688999999999887654
|
| >d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: meso-2,3-butanediol dehydrogenase species: Klebsiella pneumoniae [TaxId: 573]
Probab=99.65 E-value=1.3e-15 Score=134.13 Aligned_cols=188 Identities=16% Similarity=0.113 Sum_probs=128.7
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhh------hcCCCceeeeccCCCHHHHHHHhc-------CccE
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTALR-------GVRS 166 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~------~~~~~v~~v~~D~~d~~~l~~~~~-------~~d~ 166 (306)
|.++||||+++||++++++|+++|++|++..|+.+++++ ..+.++..+.+|++|+++++++++ .+|+
T Consensus 2 KValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi 81 (255)
T d1gega_ 2 KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDV 81 (255)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCCE
T ss_pred CEEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCccE
Confidence 557999999999999999999999999999999876432 234578889999999988776653 5799
Q ss_pred EEEcCCch--------------------------h----hhcccc-cCCCEEEEecCcccccCCCCcccccchHHH--HH
Q 021854 167 IICPSEGF--------------------------I----SNAGSL-KGVQHVILLSQLSVYRGSGGIQALMKGNAR--KL 213 (306)
Q Consensus 167 vi~~~~g~--------------------------~----~~~a~~-~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~--~~ 213 (306)
+|++++.. + ...+.+ .+-.++|++||..+..+......|..+++. .+
T Consensus 82 lVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~l 161 (255)
T d1gega_ 82 IVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVRGL 161 (255)
T ss_dssp EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHH
T ss_pred EEecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccchhhcccCcccccchhCHHHHHhh
Confidence 99984411 1 111223 345679999999888777777777654432 12
Q ss_pred HHHHHHHHHhcCCCEEEEEcCcccCCCC------------CCcce---eeecCCCCccccCHHHHHHHHHHHhhCCC--C
Q 021854 214 AEQDESMLMASGIPYTIIRTGVLQNTPG------------GKQGF---QFEEGCAANGSLSKEDAAFICVEALESIP--Q 276 (306)
Q Consensus 214 ~~~aE~~l~~sgi~~tiiRPg~l~~~~~------------~~~~~---~~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~ 276 (306)
.+.....+...||++..|.||++..... ..... .+.......-+..++|||.++++++.+.. -
T Consensus 162 tk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~peevA~~v~fL~S~~a~~i 241 (255)
T d1gega_ 162 TQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACVSYLASPDSDYM 241 (255)
T ss_dssp HHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred HHHHHHHhhhhCcEEEEEecCcccChHHhhhhhhhHhhhcccchhHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhCCc
Confidence 2333334556899999999998642110 00000 00111122335689999999999996433 4
Q ss_pred CCcEEEEecCC
Q 021854 277 TGLIFEVVNGE 287 (306)
Q Consensus 277 ~g~~~~v~~g~ 287 (306)
.|+++.|.+|-
T Consensus 242 tG~~i~vDGG~ 252 (255)
T d1gega_ 242 TGQSLLIDGGM 252 (255)
T ss_dssp CSCEEEESSSS
T ss_pred cCcEEEecCCE
Confidence 68999998774
|
| >d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Bacterial sepiapterin reductase species: Chlorobium tepidum [TaxId: 1097]
Probab=99.65 E-value=1e-15 Score=133.82 Aligned_cols=171 Identities=12% Similarity=0.105 Sum_probs=122.0
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCe-------EEEEecCcchhhhh------cCCCceeeeccCCCHHHHHHHhc----
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVKRTR-------IKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR---- 162 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~g~~-------V~~l~R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~~~---- 162 (306)
+.||||||+++||++++++|+++|++ |++..|+.+++++. .+.++.++.+|++|.++++++++
T Consensus 2 ~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~ 81 (240)
T d2bd0a1 2 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVE 81 (240)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence 35899999999999999999999987 88899998764321 23467889999999988776654
Q ss_pred ---CccEEEEcCCch------------------------------hhhcccccCCCEEEEecCcccccCCCCcccccchH
Q 021854 163 ---GVRSIICPSEGF------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGN 209 (306)
Q Consensus 163 ---~~d~vi~~~~g~------------------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~ 209 (306)
.+|++|++++.. ....+++.+-.++|++||..+..+......|..++
T Consensus 82 ~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asK 161 (240)
T d2bd0a1 82 RYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAFRHSSIYCMSK 161 (240)
T ss_dssp HTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred HcCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEechhhcCCCCCChHHHHHH
Confidence 569999884411 12234556678999999999988777777776654
Q ss_pred HH--HHHHHHHHHHHhcCCCEEEEEcCcccCCCCCCcceeeecCCCCccccCHHHHHHHHHHHhhCCC
Q 021854 210 AR--KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIP 275 (306)
Q Consensus 210 a~--~~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~~~~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~ 275 (306)
+. .+.+.....+...||+++.|.||++....... . .......+..++|||+++++++.++.
T Consensus 162 ~al~~lt~~la~el~~~gIrvn~i~PG~v~T~~~~~--~---~~~~~~~~~~PedvA~~v~~l~s~~~ 224 (240)
T d2bd0a1 162 FGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGK--V---DDEMQALMMMPEDIAAPVVQAYLQPS 224 (240)
T ss_dssp HHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCC--C---CSTTGGGSBCHHHHHHHHHHHHTSCT
T ss_pred HHHHHHHHHHHHHhCcCCeEEEEeeeCcccCchhhh--c---CHhhHhcCCCHHHHHHHHHHHHcCCc
Confidence 32 12233334455689999999999865332111 0 11112345788999999999998765
|
| >d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Erythromycin synthase, eryAI, 1st ketoreductase module species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=99.64 E-value=5.3e-15 Score=130.02 Aligned_cols=178 Identities=16% Similarity=0.194 Sum_probs=122.6
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEecCcch---hh------hhcCCCceeeeccCCCHHHHHHHhcC-----
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRN---AM------ESFGTYVESMAGDASNKKFLKTALRG----- 163 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~l~R~~~~---~~------~~~~~~v~~v~~D~~d~~~l~~~~~~----- 163 (306)
..+||||||+|+||++++++|+++|+ +|++++|+... .. +..+.++.++.+|++|.++++++++.
T Consensus 9 ~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~i~~~~ 88 (259)
T d2fr1a1 9 TGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGDDV 88 (259)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTTS
T ss_pred cCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhccccccccccccchHHHHHHhhccccccc
Confidence 57999999999999999999999998 58888887533 11 12345788999999999999888764
Q ss_pred -ccEEEEcCCch--------------------------hhhcccccCCCEEEEecCcccccCCCCcccccchHHHHHHHH
Q 021854 164 -VRSIICPSEGF--------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQ 216 (306)
Q Consensus 164 -~d~vi~~~~g~--------------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~~~~~ 216 (306)
+|.|||+++.. +..++...+..+||++||..+..+..+...|..+++. ...
T Consensus 89 ~i~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~iv~~SS~a~~~g~~~~~~YaAaka~--l~~ 166 (259)
T d2fr1a1 89 PLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELDLTAFVLFSSFASAFGAPGLGGYAPGNAY--LDG 166 (259)
T ss_dssp CEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSCCSEEEEEEEHHHHTCCTTCTTTHHHHHH--HHH
T ss_pred cccccccccccccccccccccHHHHHHHhhhhccchhHHHHHhhccCCceEeeecchhhccCCcccHHHHHHHHh--HHH
Confidence 58888874311 2233445677899999999988887777778654432 222
Q ss_pred HHHHHHhcCCCEEEEEcCcccCCCCCCcceeeecCCCCccccCHHHHHHHHHHHhhCCCCCC
Q 021854 217 DESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTG 278 (306)
Q Consensus 217 aE~~l~~sgi~~tiiRPg~l~~~~~~~~~~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~~~g 278 (306)
.-..++..|++++.|+||.+.+..-......-.........++++++++++..++..+....
T Consensus 167 la~~~~~~Gi~v~~I~pg~~~~~g~~~~~~~~~~~~~G~~~~~~~~~~~~l~~~l~~~~~~~ 228 (259)
T d2fr1a1 167 LAQQRRSDGLPATAVAWGTWAGSGMAEGPVADRFRRHGVIEMPPETACRALQNALDRAEVCP 228 (259)
T ss_dssp HHHHHHHTTCCCEEEEECCBC------------CTTTTEECBCHHHHHHHHHHHHHTTCSSC
T ss_pred HHHHHHhCCCCEEECCCCcccCCccccchHHHHHHhcCCCCCCHHHHHHHHHHHHhCCCceE
Confidence 33456678999999999986532111111100011112356899999999999998765443
|
| >d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR) species: Human (Homo sapiens), [TaxId: 9606]
Probab=99.63 E-value=2.3e-15 Score=134.88 Aligned_cols=193 Identities=11% Similarity=0.135 Sum_probs=130.2
Q ss_pred CccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhh-------hhcCCCceeeeccCCCHHHHHHHh------
Q 021854 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM-------ESFGTYVESMAGDASNKKFLKTAL------ 161 (306)
Q Consensus 95 ~~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~-------~~~~~~v~~v~~D~~d~~~l~~~~------ 161 (306)
....+|+++||||+++||++++++|+++|++|+++.|+.+++. +..+..+..+.+|++|.+.++.++
T Consensus 21 ~~l~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~ 100 (294)
T d1w6ua_ 21 NSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKV 100 (294)
T ss_dssp TTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhhhhhh
Confidence 3567899999999999999999999999999999999987632 233567889999999998877655
Q ss_pred -cCccEEEEcCCch--------------------------hh-----hcccccCCCEEEEecCcccccCCCCcccccchH
Q 021854 162 -RGVRSIICPSEGF--------------------------IS-----NAGSLKGVQHVILLSQLSVYRGSGGIQALMKGN 209 (306)
Q Consensus 162 -~~~d~vi~~~~g~--------------------------~~-----~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~ 209 (306)
.++|++|++++.. +. ......+...++.+|+..+..+......|..++
T Consensus 101 ~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~~~~~~~~~~~YsasK 180 (294)
T d1w6ua_ 101 AGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSASAK 180 (294)
T ss_dssp TCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCTTCHHHHHHH
T ss_pred ccccchhhhhhhhccccccccchhhhhhhheeeecccchhhhhhhhcccccccccccccccccchhhhcccccchHHHHH
Confidence 4579999884421 00 011224455677888877766666666665443
Q ss_pred HH--HHHHHHHHHHHhcCCCEEEEEcCcccCCCC----CCccee---eecCCCCccccCHHHHHHHHHHHhhCCC--CCC
Q 021854 210 AR--KLAEQDESMLMASGIPYTIIRTGVLQNTPG----GKQGFQ---FEEGCAANGSLSKEDAAFICVEALESIP--QTG 278 (306)
Q Consensus 210 a~--~~~~~aE~~l~~sgi~~tiiRPg~l~~~~~----~~~~~~---~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g 278 (306)
+. .+.+.....+...||++..|.||++..... ...... +........+..++|||.++..++.+.. -.|
T Consensus 181 aal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~pl~R~~~pediA~~v~fL~sd~s~~itG 260 (294)
T d1w6ua_ 181 AGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPCGRLGTVEELANLAAFLCSDYASWING 260 (294)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHHHHHHHTTCTTSSCBCHHHHHHHHHHHTSGGGTTCCS
T ss_pred HHHHHHHHHHHHHHhHhCeEEEEEccCccccchhhhccCCcHHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCchhcCCCC
Confidence 21 122323333456899999999998653221 001000 0011122346688999999999996543 478
Q ss_pred cEEEEecCC
Q 021854 279 LIFEVVNGE 287 (306)
Q Consensus 279 ~~~~v~~g~ 287 (306)
+++.|.+|.
T Consensus 261 ~~i~vDGG~ 269 (294)
T d1w6ua_ 261 AVIKFDGGE 269 (294)
T ss_dssp CEEEESTTH
T ss_pred cEEEECCCh
Confidence 999998874
|
| >d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Streptomyces coelicolor [TaxId: 1902]
Probab=99.63 E-value=1e-15 Score=135.01 Aligned_cols=189 Identities=11% Similarity=0.090 Sum_probs=130.3
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhh------hcCCCceeeeccCCCHHHHHHHhc-------Ccc
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTALR-------GVR 165 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~------~~~~~v~~v~~D~~d~~~l~~~~~-------~~d 165 (306)
+|.+|||||+++||++++++|+++|++|++..|+++++++ ..+.++..+.+|++|+++++++++ .+|
T Consensus 2 gKValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iD 81 (257)
T d2rhca1 2 SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVD 81 (257)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSCS
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHhCCCC
Confidence 6889999999999999999999999999999999876432 234578899999999988877654 569
Q ss_pred EEEEcCCch--------------------------hhhc------ccccCCCEEEEecCcccccCCCCcccccchHHHH-
Q 021854 166 SIICPSEGF--------------------------ISNA------GSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK- 212 (306)
Q Consensus 166 ~vi~~~~g~--------------------------~~~~------a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~- 212 (306)
++|++++.. +..+ +.+.+..++|++||..+..+......|..+++.-
T Consensus 82 ilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~~g~Ii~i~S~~~~~~~~~~~~Y~asKaal~ 161 (257)
T d2rhca1 82 VLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVV 161 (257)
T ss_dssp EEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHTEEEEEEECCGGGTSCCTTCHHHHHHHHHHH
T ss_pred EEEecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcCCcccccccccccccccccchhHHHHHHHHH
Confidence 999884411 1111 2335567899999999888777777776654321
Q ss_pred -HHHHHHHHHHhcCCCEEEEEcCcccCCCC------------CCccee---eecCCCCccccCHHHHHHHHHHHhhCC--
Q 021854 213 -LAEQDESMLMASGIPYTIIRTGVLQNTPG------------GKQGFQ---FEEGCAANGSLSKEDAAFICVEALESI-- 274 (306)
Q Consensus 213 -~~~~aE~~l~~sgi~~tiiRPg~l~~~~~------------~~~~~~---~~~g~~~~~~Is~~DVA~~iv~aL~~~-- 274 (306)
+.+.....+...||++..|.||++..... ...... +.......-+..++|||.++++++.+.
T Consensus 162 ~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~e~~~~~~~~~PlgR~~~pedia~~v~fL~S~~s~ 241 (257)
T d2rhca1 162 GFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAYLIGPGAA 241 (257)
T ss_dssp HHHHHHHHHTTTSEEEEEEEEECSBCSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSTTSSCBCHHHHHHHHHHHTSGGGT
T ss_pred HHHHHHHHHhhhhCcEEEEEeeCCCCCHHHHHHHhhhhhhcccChHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhc
Confidence 22222233445789999999998642110 000000 001111233568999999999999643
Q ss_pred CCCCcEEEEecCC
Q 021854 275 PQTGLIFEVVNGE 287 (306)
Q Consensus 275 ~~~g~~~~v~~g~ 287 (306)
.-.|+++.|.+|-
T Consensus 242 ~itG~~i~vDGG~ 254 (257)
T d2rhca1 242 AVTAQALNVCGGL 254 (257)
T ss_dssp TCCSCEEEESTTC
T ss_pred CCcCceEEECcCc
Confidence 3468999998763
|
| >d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase (5l265) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.63 E-value=1.7e-15 Score=134.06 Aligned_cols=190 Identities=15% Similarity=0.138 Sum_probs=123.4
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh------c---CCCceeeeccCCCHHHHHHHhc-----
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------F---GTYVESMAGDASNKKFLKTALR----- 162 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~------~---~~~v~~v~~D~~d~~~l~~~~~----- 162 (306)
..+|.++||||+++||++++++|+++|++|+++.|+.+++++. . +.++..+.+|++|+++++++++
T Consensus 3 l~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~ 82 (264)
T d1spxa_ 3 FAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGK 82 (264)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHHH
Confidence 4689999999999999999999999999999999998764321 1 1358899999999988877664
Q ss_pred --CccEEEEcCCch----------------------------------hhhcccccCCCEEEEecCc-ccccCCCCcccc
Q 021854 163 --GVRSIICPSEGF----------------------------------ISNAGSLKGVQHVILLSQL-SVYRGSGGIQAL 205 (306)
Q Consensus 163 --~~d~vi~~~~g~----------------------------------~~~~a~~~gvkr~V~iSS~-~~~~~~~~~~~~ 205 (306)
.+|++|++++.. ....+++.+ .++|+++|. +...+......|
T Consensus 83 ~g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~-g~iI~~~S~~~~~~~~~~~~~Y 161 (264)
T d1spxa_ 83 FGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK-GEIVNISSIASGLHATPDFPYY 161 (264)
T ss_dssp HSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTTSSSSCCTTSHHH
T ss_pred hCCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCcccccc-CcceeeeeeccccccCCCchhh
Confidence 579999984310 011122333 456666554 445555556667
Q ss_pred cchHHH--HHHHHHHHHHHhcCCCEEEEEcCcccCCCCCCccee------e-------ecCCCCccccCHHHHHHHHHHH
Q 021854 206 MKGNAR--KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQ------F-------EEGCAANGSLSKEDAAFICVEA 270 (306)
Q Consensus 206 ~~~~a~--~~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~~~~~------~-------~~g~~~~~~Is~~DVA~~iv~a 270 (306)
..+++. .+.+.....+...||++..|.||++........... . .......-+..++|||.+++++
T Consensus 162 ~asKaal~~lt~~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~pedvA~~v~fL 241 (264)
T d1spxa_ 162 SIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAGVMGQPQDIAEVIAFL 241 (264)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHHHCTTSSCBCHHHHHHHHHHH
T ss_pred hhhhhhHHHHHHHHHHHhcccCeEEEEEeeCCCCCcchhccCCcHHHHHHHHHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence 554332 122333333556899999999998653221110000 0 0001112356789999999999
Q ss_pred hhCC---CCCCcEEEEecCC
Q 021854 271 LESI---PQTGLIFEVVNGE 287 (306)
Q Consensus 271 L~~~---~~~g~~~~v~~g~ 287 (306)
+.++ .-.|+++.|.+|-
T Consensus 242 ~S~~~s~~itG~~i~vDGG~ 261 (264)
T d1spxa_ 242 ADRKTSSYIIGHQLVVDGGS 261 (264)
T ss_dssp HCHHHHTTCCSCEEEESTTG
T ss_pred hCCcccCCccCceEEeCCCh
Confidence 8643 2478999998764
|
| >d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Drosophila alcohol dehydrogenase species: Fly (Drosophila lebanonensis) [TaxId: 7225]
Probab=99.61 E-value=4.2e-15 Score=130.94 Aligned_cols=191 Identities=12% Similarity=0.079 Sum_probs=129.2
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhh------hcC-CCceeeeccCC-CHHHHHHHh------
Q 021854 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFG-TYVESMAGDAS-NKKFLKTAL------ 161 (306)
Q Consensus 96 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~------~~~-~~v~~v~~D~~-d~~~l~~~~------ 161 (306)
+..+|+|+||||+++||++++++|+++|++|+++.|+.++..+ ..+ .++.++.+|++ +.+++++++
T Consensus 2 ~l~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 81 (254)
T d1sbya1 2 DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQ 81 (254)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHHH
Confidence 3568999999999999999999999999999999998765221 122 37888999997 555555443
Q ss_pred -cCccEEEEcCCch----------------------hhhcccc---cCCCEEEEecCcccccCCCCcccccchHHHH--H
Q 021854 162 -RGVRSIICPSEGF----------------------ISNAGSL---KGVQHVILLSQLSVYRGSGGIQALMKGNARK--L 213 (306)
Q Consensus 162 -~~~d~vi~~~~g~----------------------~~~~a~~---~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~--~ 213 (306)
..+|++|++++.. ....+.+ ....++|++||..+..+......|..+++.- +
T Consensus 82 ~g~iDilvnnAG~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~~~~~~~~~Y~asKaal~~~ 161 (254)
T d1sbya1 82 LKTVDILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPVYSASKAAVVSF 161 (254)
T ss_dssp HSCCCEEEECCCCCCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTSHHHHHHHHHHHHH
T ss_pred cCCCCEEEeCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhccCCCCCHHHHHHHHHHHHH
Confidence 4679999985521 1112222 2356899999999988877777786654422 2
Q ss_pred HHHHHHHHHhcCCCEEEEEcCcccCC----CCCCcce--eeecCCCCccccCHHHHHHHHHHHhhCCCCCCcEEEEecCC
Q 021854 214 AEQDESMLMASGIPYTIIRTGVLQNT----PGGKQGF--QFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVVNGE 287 (306)
Q Consensus 214 ~~~aE~~l~~sgi~~tiiRPg~l~~~----~~~~~~~--~~~~g~~~~~~Is~~DVA~~iv~aL~~~~~~g~~~~v~~g~ 287 (306)
.+.....+...+|++..|.||++... ....... .+..........+.|++|++++.+++... .|+++.+.+|.
T Consensus 162 t~~la~el~~~gIrVn~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~va~~~~~~~~~~~-tG~vi~vdgG~ 240 (254)
T d1sbya1 162 TNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLLSHPTQTSEQCGQNFVKAIEANK-NGAIWKLDLGT 240 (254)
T ss_dssp HHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHHHTTSCCEEHHHHHHHHHHHHHHCC-TTCEEEEETTE
T ss_pred HHHHHhhccccCeEEEEEEeCCCcCccccccccchhHHHHHHhccccCCCCCHHHHHHHHHHhhhCCC-CCCEEEECCCE
Confidence 23333446678999999999985421 1100000 00000011234578999999999887654 78899998874
|
| >d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein F25D1.5 species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.61 E-value=3.4e-15 Score=132.90 Aligned_cols=191 Identities=10% Similarity=0.067 Sum_probs=128.9
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh------c---CCCceeeeccCCCHHHHHHHhc-----
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------F---GTYVESMAGDASNKKFLKTALR----- 162 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~------~---~~~v~~v~~D~~d~~~l~~~~~----- 162 (306)
..+|+++||||+++||++++++|++.|++|++..|+.+++++. . ..++..+.+|++|+++++++++
T Consensus 2 L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 81 (274)
T d1xhla_ 2 FSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAK 81 (274)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHHH
Confidence 3589999999999999999999999999999999998764321 1 1357889999999988777654
Q ss_pred --CccEEEEcCCch--------------------------------hhhcccccCCCEEEEecCcccccCCCCcccccch
Q 021854 163 --GVRSIICPSEGF--------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKG 208 (306)
Q Consensus 163 --~~d~vi~~~~g~--------------------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~ 208 (306)
.+|++|++++.. ....+++.+-.+++++||.....+..+...|..+
T Consensus 82 ~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~ii~~ss~~~~~~~~~~~~Y~as 161 (274)
T d1xhla_ 82 FGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAHSGYPYYACA 161 (274)
T ss_dssp HSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSSCCTTSHHHHHH
T ss_pred cCCceEEEeecccccccccccccCCHHHHHHHHhhcccccccccccccccccccccccccchhhhhccccCCCCceehhh
Confidence 569999884311 1111334556678888887776666666667654
Q ss_pred HHH--HHHHHHHHHHHhcCCCEEEEEcCcccCCCC----CCcc----e-e-e---ecCCCCccccCHHHHHHHHHHHhhC
Q 021854 209 NAR--KLAEQDESMLMASGIPYTIIRTGVLQNTPG----GKQG----F-Q-F---EEGCAANGSLSKEDAAFICVEALES 273 (306)
Q Consensus 209 ~a~--~~~~~aE~~l~~sgi~~tiiRPg~l~~~~~----~~~~----~-~-~---~~g~~~~~~Is~~DVA~~iv~aL~~ 273 (306)
++. .+.+.....+...||++..|.||++..... .... . . + .......-+..++|||.++++++..
T Consensus 162 Kaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~iPlgR~g~pediA~~v~fL~S~ 241 (274)
T d1xhla_ 162 KAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGKPEEIANIIVFLADR 241 (274)
T ss_dssp HHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHHHHHHHHHHHHCH
T ss_pred hhHHHHHHHHHHHHHhHhCCceeeeccCCCcCchhhhhcccchhhHHHHHHHHHHHcCCCCCCCcCHHHHHHHHHHHcCC
Confidence 432 222333334556899999999998643210 0000 0 0 0 0011122355889999999999853
Q ss_pred C---CCCCcEEEEecCC
Q 021854 274 I---PQTGLIFEVVNGE 287 (306)
Q Consensus 274 ~---~~~g~~~~v~~g~ 287 (306)
+ .-.|+++.|.+|-
T Consensus 242 d~s~~itG~~i~vDGG~ 258 (274)
T d1xhla_ 242 NLSSYIIGQSIVADGGS 258 (274)
T ss_dssp HHHTTCCSCEEEESTTG
T ss_pred ccccCccCcEEEeCcCH
Confidence 2 2578999999875
|
| >d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Peroxisomal trans 2-enoyl CoA reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.61 E-value=6.7e-15 Score=132.54 Aligned_cols=189 Identities=14% Similarity=0.118 Sum_probs=122.9
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh-----------cCCCceeeeccCCCHHHHHHHhc---
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-----------FGTYVESMAGDASNKKFLKTALR--- 162 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~-----------~~~~v~~v~~D~~d~~~l~~~~~--- 162 (306)
+.+|+++||||+++||++++++|+++|++|++..|+.+++++. .+.++..+.+|++|.++++++++
T Consensus 10 L~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~ 89 (297)
T d1yxma1 10 LQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTL 89 (297)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHHHH
Confidence 4689999999999999999999999999999999998763221 13468889999999988777653
Q ss_pred ----CccEEEEcCCch------------------------------hhhcccccCCCEEEEecCcccccCCCCcccccch
Q 021854 163 ----GVRSIICPSEGF------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKG 208 (306)
Q Consensus 163 ----~~d~vi~~~~g~------------------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~ 208 (306)
.+|++|++++.. ....+.+.+-.++|++|+... ........|..+
T Consensus 90 ~~~G~iDiLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~Ii~~ss~~~-~~~~~~~~Y~as 168 (297)
T d1yxma1 90 DTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTK-AGFPLAVHSGAA 168 (297)
T ss_dssp HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCCT-TCCTTCHHHHHH
T ss_pred HHhCCeEEEEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhcccccccccccccccc-ccccccccchhH
Confidence 579999984421 111234455667888876543 333344445333
Q ss_pred HHH--HHHHHHHHHHHhcCCCEEEEEcCcccCCCCC----Ccceeee----cCCCCccccCHHHHHHHHHHHhhCCC--C
Q 021854 209 NAR--KLAEQDESMLMASGIPYTIIRTGVLQNTPGG----KQGFQFE----EGCAANGSLSKEDAAFICVEALESIP--Q 276 (306)
Q Consensus 209 ~a~--~~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~----~~~~~~~----~g~~~~~~Is~~DVA~~iv~aL~~~~--~ 276 (306)
++. .+.+.....+...||++..|.||++...... .....+. ......-+..++|||.++++++.+.. -
T Consensus 169 Kaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~plgR~g~pedvA~~v~fL~Sd~s~~i 248 (297)
T d1yxma1 169 RAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAKRIGVPEEVSSVVCFLLSPAASFI 248 (297)
T ss_dssp HHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGGSTTSSCBCTHHHHHHHHHHHSGGGTTC
T ss_pred HHHHHHHHHHHHHHhcccCceEEEeeeCcCcCcchhhhccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCc
Confidence 221 1222222334457999999999986432110 0000000 00111234578999999999996533 4
Q ss_pred CCcEEEEecC
Q 021854 277 TGLIFEVVNG 286 (306)
Q Consensus 277 ~g~~~~v~~g 286 (306)
.|+++.|.+|
T Consensus 249 TG~~i~VDGG 258 (297)
T d1yxma1 249 TGQSVDVDGG 258 (297)
T ss_dssp CSCEEEESTT
T ss_pred CCcEEEeCcC
Confidence 7899999876
|
| >d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Thermus thermophilus [TaxId: 274]
Probab=99.60 E-value=9.2e-15 Score=128.49 Aligned_cols=190 Identities=11% Similarity=0.051 Sum_probs=125.2
Q ss_pred ccCCCeEEEEcCCC--hHHHHHHHHHHHCCCeEEEEecCcchhhh-----hcCCCceeeeccCCCHHHHHHHhc------
Q 021854 96 EEARDAVLVTDGDS--DIGQMVILSLIVKRTRIKALVKDKRNAME-----SFGTYVESMAGDASNKKFLKTALR------ 162 (306)
Q Consensus 96 ~~~~~~ilVtGatG--~iG~~l~~~L~~~g~~V~~l~R~~~~~~~-----~~~~~v~~v~~D~~d~~~l~~~~~------ 162 (306)
++.+|+++||||+| +||++++++|+++|++|++..|+.+...+ ........+.+|++|.++++++++
T Consensus 5 ~L~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 84 (256)
T d1ulua_ 5 DLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAF 84 (256)
T ss_dssp CCTTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHhhhccCcccccccccCCHHHHHHHHHHHHHhc
Confidence 35689999999998 89999999999999999988887653211 123467789999999988877654
Q ss_pred -CccEEEEcCCch--------h--------------------------hhcccccCCCEEEEecCcccccCCCCcccccc
Q 021854 163 -GVRSIICPSEGF--------I--------------------------SNAGSLKGVQHVILLSQLSVYRGSGGIQALMK 207 (306)
Q Consensus 163 -~~d~vi~~~~g~--------~--------------------------~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~ 207 (306)
++|++|++++.. . ...+++ -.++|++||..+..+......|..
T Consensus 85 g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~--~G~Iv~isS~~~~~~~~~~~~Y~a 162 (256)
T d1ulua_ 85 GGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLRE--GGGIVTLTYYASEKVVPKYNVMAI 162 (256)
T ss_dssp SSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE--EEEEEEEECGGGTSBCTTCHHHHH
T ss_pred CCceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhcc--CCEEEEEeehHhcCCCCCchHHHH
Confidence 579999874310 0 001122 257999999988877666667755
Q ss_pred hHHH--HHHHHHHHHHHhcCCCEEEEEcCcccCCCCCCcc---ee---eecCCCCccccCHHHHHHHHHHHhhCCC--CC
Q 021854 208 GNAR--KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQG---FQ---FEEGCAANGSLSKEDAAFICVEALESIP--QT 277 (306)
Q Consensus 208 ~~a~--~~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~~~---~~---~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~ 277 (306)
+++. .+.+..-..+...||++..|.||++......... .. +........+..++|||.++++++.+.. -.
T Consensus 163 sKaal~~ltr~lA~ela~~gIrVN~I~PG~i~t~~~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~s~~it 242 (256)
T d1ulua_ 163 AKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPLRRNITQEEVGNLGLFLLSPLASGIT 242 (256)
T ss_dssp HHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----------CHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGGTTCC
T ss_pred HHHHHHHHHHHHHHHhcccCCEEeeeccceeeeccccchhhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhCCcc
Confidence 4332 1222233334568999999999986532211100 00 0011112336688999999999996543 46
Q ss_pred CcEEEEecCC
Q 021854 278 GLIFEVVNGE 287 (306)
Q Consensus 278 g~~~~v~~g~ 287 (306)
|+++.|.+|-
T Consensus 243 G~~i~VDGG~ 252 (256)
T d1ulua_ 243 GEVVYVDAGY 252 (256)
T ss_dssp SCEEEESTTG
T ss_pred CCeEEECcCE
Confidence 8999998763
|
| >d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase species: Pseudomonas sp., lb400 [TaxId: 306]
Probab=99.60 E-value=8.6e-15 Score=130.38 Aligned_cols=189 Identities=17% Similarity=0.159 Sum_probs=126.9
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhh---hcCCCceeeeccCCCHHHHHHHhc-------CccE
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALR-------GVRS 166 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~---~~~~~v~~v~~D~~d~~~l~~~~~-------~~d~ 166 (306)
+.+|+++||||+++||++++++|+++|++|+++.|+++++.+ .++.++..+.+|++|.++++++++ .+|+
T Consensus 3 L~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~idi 82 (276)
T d1bdba_ 3 LKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDHGDNVLGIVGDVRSLEDQKQAASRCVARFGKIDT 82 (276)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeeEEecccccHHHHHHHHHHHHHHhCCccc
Confidence 468999999999999999999999999999999999887543 345678899999999888776653 5799
Q ss_pred EEEcCCch-----------------------------------hhhcccccCCCEEEEecCcccccCCCCcccccchHHH
Q 021854 167 IICPSEGF-----------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR 211 (306)
Q Consensus 167 vi~~~~g~-----------------------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~ 211 (306)
+|++++.. ....+++.+ .++|++||..+..+......|..+++.
T Consensus 83 lvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~-g~iI~i~S~~~~~~~~~~~~Y~asKaa 161 (276)
T d1bdba_ 83 LIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASR-GNVIFTISNAGFYPNGGGPLYTAAKHA 161 (276)
T ss_dssp EECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTSTTSSCHHHHHHHHH
T ss_pred ccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhcC-CCceeeeechhccCCCCCchHHHHHHH
Confidence 99874310 011123333 689999998887776666677654432
Q ss_pred H--HHHHHHHHHHhcCCCEEEEEcCcccCCCCCC-------ccee-------eecCCCCccccCHHHHHHHHHHHhhCC-
Q 021854 212 K--LAEQDESMLMASGIPYTIIRTGVLQNTPGGK-------QGFQ-------FEEGCAANGSLSKEDAAFICVEALESI- 274 (306)
Q Consensus 212 ~--~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~-------~~~~-------~~~g~~~~~~Is~~DVA~~iv~aL~~~- 274 (306)
- +.+.....+. .+|++..|.||++....... +... +.......-+..++|+|.++++++..+
T Consensus 162 l~~ltr~lA~ela-~~IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~peeva~~v~fL~S~~~ 240 (276)
T d1bdba_ 162 IVGLVRELAFELA-PYVRVNGVGSGGINSDLRGPSSLGMGSKAISTVPLADMLKSVLPIGRMPEVEEYTGAYVFFATRGD 240 (276)
T ss_dssp HHHHHHHHHHHHT-TTCEEEEEEECCCCSCCCCCGGGC---------CHHHHHTTTCTTSSCCCGGGGSHHHHHHHCHHH
T ss_pred HHHHHHHHHHHhh-cceEEcccCCCCEecCcCCccchhhhhhccCcHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCCcc
Confidence 1 2222222233 45999999999864322100 0000 001111122457899999999988532
Q ss_pred --CCCCcEEEEecCC
Q 021854 275 --PQTGLIFEVVNGE 287 (306)
Q Consensus 275 --~~~g~~~~v~~g~ 287 (306)
.-.|+++.|.+|-
T Consensus 241 a~~itG~~i~VDGG~ 255 (276)
T d1bdba_ 241 AAPATGALLNYDGGL 255 (276)
T ss_dssp HTTCSSCEEEESSSG
T ss_pred cCCeeCcEEEECcCh
Confidence 3568999998763
|
| >d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus, TTHB020 [TaxId: 274]
Probab=99.60 E-value=2.6e-15 Score=131.30 Aligned_cols=190 Identities=16% Similarity=0.180 Sum_probs=123.0
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhh---hcCCCceeeeccCCCHHHHHHHhc-------CccE
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALR-------GVRS 166 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~---~~~~~v~~v~~D~~d~~~l~~~~~-------~~d~ 166 (306)
..+|+++||||+++||++++++|+++|++|++.+|+.+++.+ ..+.++.++++|++|+++++++++ .+|+
T Consensus 3 l~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~i~~~~~~i~~~~g~iDi 82 (241)
T d2a4ka1 3 LSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLHG 82 (241)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCceEEEEecCCCHHHHHHHHHHHHHHhCCccE
Confidence 358999999999999999999999999999999999987433 345678889999999988876654 5799
Q ss_pred EEEcCCch--------------------------hhhcc--cccCCCEEEEecCcccccCCCCcccccchHH--HHHHHH
Q 021854 167 IICPSEGF--------------------------ISNAG--SLKGVQHVILLSQLSVYRGSGGIQALMKGNA--RKLAEQ 216 (306)
Q Consensus 167 vi~~~~g~--------------------------~~~~a--~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a--~~~~~~ 216 (306)
+|++++.. +..++ ...+-+.++++|+.+.. ..++...|..+++ ..+.+.
T Consensus 83 LinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~~~i~~~ss~a~~-~~~~~~~Y~~sK~al~~lt~~ 161 (241)
T d2a4ka1 83 VAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGL-GAFGLAHYAAGKLGVVGLART 161 (241)
T ss_dssp EEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTC-CHHHHHHHHHCSSHHHHHHHH
T ss_pred eccccccccccchhhhhccccccccccccccccccccccccccccccceeeccccccc-cccCccccchhhHHHHHHHHH
Confidence 99973311 01111 11233455555655443 2233344433322 222233
Q ss_pred HHHHHHhcCCCEEEEEcCcccCCCCCC-cce---eeecCCCCccccCHHHHHHHHHHHhhCCC--CCCcEEEEecCC
Q 021854 217 DESMLMASGIPYTIIRTGVLQNTPGGK-QGF---QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVNGE 287 (306)
Q Consensus 217 aE~~l~~sgi~~tiiRPg~l~~~~~~~-~~~---~~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~~~v~~g~ 287 (306)
....+...||++..|.||.+....... ... .+........+..++|||+++++++.+.. -.|+++.|.+|-
T Consensus 162 lA~el~~~gIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v~fL~S~~s~~itG~~i~vDGG~ 238 (241)
T d2a4ka1 162 LALELARKGVRVNVLLPGLIQTPMTAGLPPWAWEQEVGASPLGRAGRPEEVAQAALFLLSEESAYITGQALYVDGGR 238 (241)
T ss_dssp HHHHHTTTTCEEEEEEECSBCCGGGTTSCHHHHHHHHHTSTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred HHHHHhHhCCEEeeeccCcCCCHHHHhhhHhHHHHHHhCCCCCCCcCHHHHHHHHHHHhcchhCCCcCceEEeCCCc
Confidence 333345678999999999864221111 000 01111222346688999999999996533 468899988774
|
| >d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative dehydrogenase ARPG836 (MGC4172) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.60 E-value=8.4e-15 Score=129.15 Aligned_cols=179 Identities=18% Similarity=0.112 Sum_probs=116.2
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh--------cCCCceeeeccCCCHHHHHHHh-------
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES--------FGTYVESMAGDASNKKFLKTAL------- 161 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~--------~~~~v~~v~~D~~d~~~l~~~~------- 161 (306)
.++|++|||||+++||+++++.|+++|++|++..|+.+++++. .+..+.++.+|++|++++++++
T Consensus 8 lk~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~~~~ 87 (257)
T d1xg5a_ 8 WRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQH 87 (257)
T ss_dssp GTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHHHhc
Confidence 5689999999999999999999999999999999998763321 1236778899999998877655
Q ss_pred cCccEEEEcCCch------------------------------hhhccccc--CCCEEEEecCcccccCC--CCcccccc
Q 021854 162 RGVRSIICPSEGF------------------------------ISNAGSLK--GVQHVILLSQLSVYRGS--GGIQALMK 207 (306)
Q Consensus 162 ~~~d~vi~~~~g~------------------------------~~~~a~~~--gvkr~V~iSS~~~~~~~--~~~~~~~~ 207 (306)
.++|++|++++.. ....+.+. +-.++|++||.++.... .....|..
T Consensus 88 g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~p~~~~~~Y~~ 167 (257)
T d1xg5a_ 88 SGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYSA 167 (257)
T ss_dssp CCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCSCGGGHHHHH
T ss_pred CCCCEEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHhcCCCCCcccHHHHH
Confidence 3579999984421 01112222 34799999998876432 23333543
Q ss_pred hHHH--HHHHHHHHHH--HhcCCCEEEEEcCcccCCCC----CCcceeeecCCCCccccCHHHHHHHHHHHhhCCC
Q 021854 208 GNAR--KLAEQDESML--MASGIPYTIIRTGVLQNTPG----GKQGFQFEEGCAANGSLSKEDAAFICVEALESIP 275 (306)
Q Consensus 208 ~~a~--~~~~~aE~~l--~~sgi~~tiiRPg~l~~~~~----~~~~~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~ 275 (306)
+++. .+.+.....| ...+|++..|.||.+..... ...............+..++|||++++.++.++.
T Consensus 168 sKaal~~ltr~la~el~~~~~~I~vn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~fL~s~~a 243 (257)
T d1xg5a_ 168 TKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDKDPEKAAATYEQMKCLKPEDVAEAVIYVLSTPA 243 (257)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTTCHHHHHHHHC---CBCHHHHHHHHHHHHHSCT
T ss_pred HHHHHHhCHHHHHHHHHhCCCCEEEEEEeCCCCCChhhhhcChhhHHHHHhcCCCCCCcCHHHHHHHHHHHhCChh
Confidence 3221 1112222223 34689999999998653221 1110001111122446889999999999998764
|
| >d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein R05D8.7 species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.59 E-value=3.6e-15 Score=132.55 Aligned_cols=190 Identities=11% Similarity=0.083 Sum_probs=124.6
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh------c---CCCceeeeccCCCHHHHHHHhc-----
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------F---GTYVESMAGDASNKKFLKTALR----- 162 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~------~---~~~v~~v~~D~~d~~~l~~~~~----- 162 (306)
..+|+++||||+++||+++++.|+++|++|++..|+.+++++. . +.++..+.+|++|+++++++++
T Consensus 3 L~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~ 82 (272)
T d1xkqa_ 3 FSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQ 82 (272)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHHH
Confidence 4589999999999999999999999999999999998764321 1 1357889999999988777654
Q ss_pred --CccEEEEcCCch----------------------------------hhhcccccCCCEEEEe-cCcccccCCCCcccc
Q 021854 163 --GVRSIICPSEGF----------------------------------ISNAGSLKGVQHVILL-SQLSVYRGSGGIQAL 205 (306)
Q Consensus 163 --~~d~vi~~~~g~----------------------------------~~~~a~~~gvkr~V~i-SS~~~~~~~~~~~~~ 205 (306)
.+|++|++++.. ....+++.+ .++|++ ||.+...+......|
T Consensus 83 ~g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~-g~iI~~~Ss~a~~~~~~~~~~Y 161 (272)
T d1xkqa_ 83 FGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK-GEIVNVSSIVAGPQAQPDFLYY 161 (272)
T ss_dssp HSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGSSSCCCSSHHH
T ss_pred hCCceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhcccccccC-CccccccchhccccCCCCcchh
Confidence 579999884311 001122233 345555 445556666666667
Q ss_pred cchHHH--HHHHHHHHHHHhcCCCEEEEEcCcccCCC----CCCcce---------eeecCCCCccccCHHHHHHHHHHH
Q 021854 206 MKGNAR--KLAEQDESMLMASGIPYTIIRTGVLQNTP----GGKQGF---------QFEEGCAANGSLSKEDAAFICVEA 270 (306)
Q Consensus 206 ~~~~a~--~~~~~aE~~l~~sgi~~tiiRPg~l~~~~----~~~~~~---------~~~~g~~~~~~Is~~DVA~~iv~a 270 (306)
..+++. .+.+.....+...||++..|.||++.... ...... .........-+..++|||.+++++
T Consensus 162 ~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~pediA~~v~fL 241 (272)
T d1xkqa_ 162 AIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIGAAGKPEHIANIILFL 241 (272)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcchhhhccCCchHHHHHHHHHHHHHhcCCCCCCCcCHHHHHHHHHHH
Confidence 654432 12233333456689999999999864221 000000 000111123356889999999999
Q ss_pred hhCC--C-CCCcEEEEecCC
Q 021854 271 LESI--P-QTGLIFEVVNGE 287 (306)
Q Consensus 271 L~~~--~-~~g~~~~v~~g~ 287 (306)
+.++ . -.|+++.|.+|-
T Consensus 242 ~S~~as~~iTG~~i~vDGG~ 261 (272)
T d1xkqa_ 242 ADRNLSFYILGQSIVADGGT 261 (272)
T ss_dssp HCHHHHTTCCSCEEEESTTG
T ss_pred hCcchhCCccCeEEEeCcCH
Confidence 8643 2 478999998875
|
| >d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Mannitol dehydrogenase species: Mushroom (Agaricus bisporus) [TaxId: 5341]
Probab=99.59 E-value=5e-15 Score=130.72 Aligned_cols=192 Identities=13% Similarity=0.164 Sum_probs=124.9
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhh-------hhcCCCceeeeccCCCHHHHHHHhc------
Q 021854 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM-------ESFGTYVESMAGDASNKKFLKTALR------ 162 (306)
Q Consensus 96 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~-------~~~~~~v~~v~~D~~d~~~l~~~~~------ 162 (306)
..++|++|||||+++||+++++.|+++|++|+++.|+.+++. +..+.++..+.+|++|+++++++++
T Consensus 6 ~l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 85 (260)
T d1h5qa_ 6 SFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADL 85 (260)
T ss_dssp CCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred cCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHh
Confidence 456899999999999999999999999999999999987632 2245678899999999988877664
Q ss_pred -CccEEEEcCCch------------------------------hhhcc-cccCCCEEEEecCcccccCC-------CCcc
Q 021854 163 -GVRSIICPSEGF------------------------------ISNAG-SLKGVQHVILLSQLSVYRGS-------GGIQ 203 (306)
Q Consensus 163 -~~d~vi~~~~g~------------------------------~~~~a-~~~gvkr~V~iSS~~~~~~~-------~~~~ 203 (306)
.+|++|++++.. ....+ ++.+-.+++.+|+....... ....
T Consensus 86 g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~~~~~~~~~~~~~~~~~ 165 (260)
T d1h5qa_ 86 GPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQV 165 (260)
T ss_dssp CSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEETTEECSCH
T ss_pred CCCcEecccccccccCCHHHhccccccccccccccchhhhhhhhcccccccccceEEEEeeccccccccccccccCcccc
Confidence 569999884311 11112 23445566666665543321 1223
Q ss_pred cccchHHH--HHHHHHHHHHHhcCCCEEEEEcCcccCCCCCC--cce--eeecCCCCccccCHHHHHHHHHHHhhCCC--
Q 021854 204 ALMKGNAR--KLAEQDESMLMASGIPYTIIRTGVLQNTPGGK--QGF--QFEEGCAANGSLSKEDAAFICVEALESIP-- 275 (306)
Q Consensus 204 ~~~~~~a~--~~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~--~~~--~~~~g~~~~~~Is~~DVA~~iv~aL~~~~-- 275 (306)
.|..+++. .+.+.....+...||++..|.||++....... ... .+.......-+..++|||.++++++.+..
T Consensus 166 ~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~pl~R~g~pedvA~~v~fL~S~~s~~ 245 (260)
T d1h5qa_ 166 FYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMDKKIRDHQASNIPLNRFAQPEEMTGQAILLLSDHATY 245 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSCHHHHHHHHHTCTTSSCBCGGGGHHHHHHHHSGGGTT
T ss_pred chhhhhhhHHHHHHHHHHHhchhCeEEeecCCCcccCcchhccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhcchhCC
Confidence 44433221 12222333355689999999999864221110 000 01111122335678999999999986443
Q ss_pred CCCcEEEEecCC
Q 021854 276 QTGLIFEVVNGE 287 (306)
Q Consensus 276 ~~g~~~~v~~g~ 287 (306)
-.|+++.|.+|-
T Consensus 246 itG~~i~VDGG~ 257 (260)
T d1h5qa_ 246 MTGGEYFIDGGQ 257 (260)
T ss_dssp CCSCEEEECTTG
T ss_pred CcCceEEECCCe
Confidence 468999998875
|
| >d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Halohydrin dehalogenase HheC species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.58 E-value=3e-15 Score=131.61 Aligned_cols=187 Identities=12% Similarity=0.010 Sum_probs=123.6
Q ss_pred eEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHH-------HhcCccEEEEcCCc
Q 021854 101 AVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKT-------ALRGVRSIICPSEG 173 (306)
Q Consensus 101 ~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~-------~~~~~d~vi~~~~g 173 (306)
+++||||+++||+++++.|+++|++|++..|+.++.++.......++.+|+.|.+++++ .+..+|++|++++.
T Consensus 2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~~~~~~G~iDiLVnNAg~ 81 (252)
T d1zmta1 2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAETYPQLKPMSEQEPAELIEAVTSAYGQVDVLVSNDIF 81 (252)
T ss_dssp EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHCTTSEECCCCSHHHHHHHHHHHHSCCCEEEEECCC
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhhhCcEEEeccCCHHHHHHHHHHHHHHcCCCCEEEECCcC
Confidence 78999999999999999999999999999998876543322222344567766544433 34567999986331
Q ss_pred -----h--------------------------hhhcccccCCCEEEEecCcccccCCCCcccccchHHH--HHHHHHHHH
Q 021854 174 -----F--------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--KLAEQDESM 220 (306)
Q Consensus 174 -----~--------------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~--~~~~~aE~~ 220 (306)
. ....+++.+-.++|++||..+..+......|..+++. .+.+.....
T Consensus 82 ~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~isS~~~~~~~~~~~~Y~asKaal~~lt~~lA~e 161 (252)
T d1zmta1 82 APEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPWKELSTYTSARAGACTLANALSKE 161 (252)
T ss_dssp CCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCCTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccceeecccccccccccccccccccccccHHHHHHHHHHH
Confidence 0 1112345666899999999988777777777655432 122333334
Q ss_pred HHhcCCCEEEEEcCcccCCCCCCc---------cee---eecCCCCccccCHHHHHHHHHHHhhCCC--CCCcEEEEecC
Q 021854 221 LMASGIPYTIIRTGVLQNTPGGKQ---------GFQ---FEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVNG 286 (306)
Q Consensus 221 l~~sgi~~tiiRPg~l~~~~~~~~---------~~~---~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~~~v~~g 286 (306)
+...||++..|.||++........ ... +.......-+..++|||.++++++.+.. -.|+++.|.+|
T Consensus 162 la~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~e~~~~~~~~~pl~R~g~pedvA~~v~fL~S~~s~~iTG~~i~vdGG 241 (252)
T d1zmta1 162 LGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQRLGTQKELGELVAFLASGSCDYLTGQVFWLAGG 241 (252)
T ss_dssp HGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHHSSSSSCBCHHHHHHHHHHHHTTSCGGGTTCEEEESTT
T ss_pred hcccCcEEEEEecCCCcCcchhhhhhcccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCCcCCeEEECCC
Confidence 556899999999998653221110 000 0000111235688999999999997544 46899999987
Q ss_pred C
Q 021854 287 E 287 (306)
Q Consensus 287 ~ 287 (306)
-
T Consensus 242 ~ 242 (252)
T d1zmta1 242 F 242 (252)
T ss_dssp C
T ss_pred c
Confidence 4
|
| >d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dehydrogenase/reductase SDR family member 6, DHRS6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.57 E-value=9.9e-15 Score=127.80 Aligned_cols=191 Identities=14% Similarity=0.110 Sum_probs=128.4
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcC-CCceeeeccCCCHHHHHHHh---cCccEEEEcCC
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG-TYVESMAGDASNKKFLKTAL---RGVRSIICPSE 172 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~-~~v~~v~~D~~d~~~l~~~~---~~~d~vi~~~~ 172 (306)
..+|++|||||+++||+++++.|+++|++|++..|+++++++... .+++....|+.+.+.++... .++|++||+++
T Consensus 4 l~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~id~lVn~ag 83 (245)
T d2ag5a1 4 LDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQTRVLDVTKKKQIDQFANEVERLDVLFNVAG 83 (245)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGGSTTEEEEECCTTCHHHHHHHHHHCSCCSEEEECCC
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhccCCceeeeeccccccccccccccccceeEEeccc
Confidence 468999999999999999999999999999999999887655433 46888899998876665544 56799999843
Q ss_pred ch------------------------------hhhcccccCCCEEEEecCcccc-cCCCCcccccchHHHH--HHHHHHH
Q 021854 173 GF------------------------------ISNAGSLKGVQHVILLSQLSVY-RGSGGIQALMKGNARK--LAEQDES 219 (306)
Q Consensus 173 g~------------------------------~~~~a~~~gvkr~V~iSS~~~~-~~~~~~~~~~~~~a~~--~~~~aE~ 219 (306)
.. ....+.+.+-.++|++||..+. .+......|..+++.- +.+..-.
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~~~~~~Y~~sKaal~~l~r~lA~ 163 (245)
T d2ag5a1 84 FVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLTKSVAA 163 (245)
T ss_dssp CCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCTTBHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCCCceeeeeechhhccCCccchhHHHHHHHHHHHHHHHHHH
Confidence 11 1122344566799999887653 4445555565543311 2222233
Q ss_pred HHHhcCCCEEEEEcCcccCCCC------CCcc--e--eeecCCCCccccCHHHHHHHHHHHhhCCC--CCCcEEEEecCC
Q 021854 220 MLMASGIPYTIIRTGVLQNTPG------GKQG--F--QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVNGE 287 (306)
Q Consensus 220 ~l~~sgi~~tiiRPg~l~~~~~------~~~~--~--~~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~~~v~~g~ 287 (306)
.+...||++..|.||++..... .... . .+........+..++|||+++..++.+.. -.|+++.|.+|-
T Consensus 164 e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~pedva~~v~fL~s~~s~~iTG~~i~VDGG~ 243 (245)
T d2ag5a1 164 DFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTGRFATAEEIAMLCVYLASDESAYVTGNPVIIDGGW 243 (245)
T ss_dssp HHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCTTSSCEEHHHHHHHHHHHHSGGGTTCCSCEEEECTTG
T ss_pred HhhhhCcEEEEEeeceeechhhHhhhhhhhhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhChhhCCCcCceEEeCCCc
Confidence 3456899999999998642110 0000 0 00011122346788999999999997543 478999988763
|
| >d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,6,8-tetrahydroxynaphthalene reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=99.57 E-value=1.2e-14 Score=128.02 Aligned_cols=189 Identities=14% Similarity=0.104 Sum_probs=122.8
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcch-hh------hhcCCCceeeeccCCCHHHHHHHhc-------
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-AM------ESFGTYVESMAGDASNKKFLKTALR------- 162 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~-~~------~~~~~~v~~v~~D~~d~~~l~~~~~------- 162 (306)
+.+|++|||||+++||++++++|+++|++|++..|+.++ .+ ...+.++..+.+|++|.++++++++
T Consensus 4 L~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g 83 (259)
T d1ja9a_ 4 LAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFG 83 (259)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHHcC
Confidence 468999999999999999999999999999987766544 21 1235578899999999888877664
Q ss_pred CccEEEEcCCch------------------------------hhhcccccCCCEEEEecCccc-ccCCCCcccccchHHH
Q 021854 163 GVRSIICPSEGF------------------------------ISNAGSLKGVQHVILLSQLSV-YRGSGGIQALMKGNAR 211 (306)
Q Consensus 163 ~~d~vi~~~~g~------------------------------~~~~a~~~gvkr~V~iSS~~~-~~~~~~~~~~~~~~a~ 211 (306)
..|++|++++.. ....+++. +++++++|..+ ..+......|..+++.
T Consensus 84 ~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~--g~~iii~s~~~~~~~~~~~~~Y~asK~a 161 (259)
T d1ja9a_ 84 GLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRG--GRIILTSSIAAVMTGIPNHALYAGSKAA 161 (259)
T ss_dssp CEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEE--EEEEEECCGGGTCCSCCSCHHHHHHHHH
T ss_pred CCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcC--CcccccccccccccCCCCchhHHHHHHH
Confidence 569999884411 11123333 36666765544 3344455555443321
Q ss_pred --HHHHHHHHHHHhcCCCEEEEEcCcccCCC---------C-CCccee-------eecCCCCccccCHHHHHHHHHHHhh
Q 021854 212 --KLAEQDESMLMASGIPYTIIRTGVLQNTP---------G-GKQGFQ-------FEEGCAANGSLSKEDAAFICVEALE 272 (306)
Q Consensus 212 --~~~~~aE~~l~~sgi~~tiiRPg~l~~~~---------~-~~~~~~-------~~~g~~~~~~Is~~DVA~~iv~aL~ 272 (306)
.+.+.....+...||++..|.||++.... . ...... +.......-+..++|||+++++++.
T Consensus 162 l~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~g~p~eVa~~v~fL~S 241 (259)
T d1ja9a_ 162 VEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIGYPADIGRAVSALCQ 241 (259)
T ss_dssp HHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHhhcCeEEeccCcCCccChhhhhhhhhhhhhhcccCCHHHHHHHHHhCCCCCCCcCHHHHHHHHHHHhC
Confidence 12233333345679999999999864210 0 000000 0011122346789999999999997
Q ss_pred CCC--CCCcEEEEecCC
Q 021854 273 SIP--QTGLIFEVVNGE 287 (306)
Q Consensus 273 ~~~--~~g~~~~v~~g~ 287 (306)
+.. -.|+++.|.+|.
T Consensus 242 ~~a~~itG~~i~vDGG~ 258 (259)
T d1ja9a_ 242 EESEWINGQVIKLTGGG 258 (259)
T ss_dssp GGGTTCCSCEEEESTTC
T ss_pred chhcCCcCceEEeCCCC
Confidence 644 468999998875
|
| >d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.57 E-value=2.8e-15 Score=135.32 Aligned_cols=184 Identities=13% Similarity=0.015 Sum_probs=123.0
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcch---------hh---hhcCCCceeeeccCCCHHHHHHH----
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN---------AM---ESFGTYVESMAGDASNKKFLKTA---- 160 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~---------~~---~~~~~~v~~v~~D~~d~~~l~~~---- 160 (306)
..+|+++||||+++||++++++|+++|++|++..|+.+. ++ +........+.+|+.|.+.++++
T Consensus 5 l~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~ 84 (302)
T d1gz6a_ 5 FDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVKTA 84 (302)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHHHH
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhcccccccccchHHHHHHHHHHH
Confidence 458999999999999999999999999999998776542 11 11222345567788876555443
Q ss_pred ---hcCccEEEEcCCch------------------------------hhhcccccCCCEEEEecCcccccCCCCcccccc
Q 021854 161 ---LRGVRSIICPSEGF------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMK 207 (306)
Q Consensus 161 ---~~~~d~vi~~~~g~------------------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~ 207 (306)
+..+|++|++++.. ....+++.+-.+||++||..+..+..+...|..
T Consensus 85 ~~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS~~~~~~~~~~~~Y~a 164 (302)
T d1gz6a_ 85 LDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNFGQANYSA 164 (302)
T ss_dssp HHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHH
T ss_pred HHHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCChhhcCCCCCcHHHHH
Confidence 34679999984411 122245566789999999998877777777765
Q ss_pred hHHHH--HHHHHHHHHHhcCCCEEEEEcCcccCCCCCCcceeeecCCCCccccCHHHHHHHHHHHhhCCC-CCCcEEEEe
Q 021854 208 GNARK--LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIP-QTGLIFEVV 284 (306)
Q Consensus 208 ~~a~~--~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~~~~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~-~~g~~~~v~ 284 (306)
+++.- +.+.....+...||++..|.||+......... .......+.++|||.++++++.+.. ..|+++.|.
T Consensus 165 sKaal~~lt~~la~E~~~~gIrVN~I~PG~~~t~~~~~~------~~~~~~~~~PedvA~~v~fL~S~~a~itG~~i~vd 238 (302)
T d1gz6a_ 165 AKLGLLGLANTLVIEGRKNNIHCNTIAPNAGSRMTETVM------PEDLVEALKPEYVAPLVLWLCHESCEENGGLFEVG 238 (302)
T ss_dssp HHHHHHHHHHHHHHHTGGGTEEEEEEEEECCSTTTGGGS------CHHHHHHSCGGGTHHHHHHHTSTTCCCCSCEEEEE
T ss_pred HHHHHHHHHHHHHHHHhccCCceeeeCCCCCCcchhhcC------cHhhHhcCCHHHHHHHHHHHcCCCcCCCCcEEEeC
Confidence 44321 22222233446799999999998643221110 1112235678999999999886432 467888776
Q ss_pred cC
Q 021854 285 NG 286 (306)
Q Consensus 285 ~g 286 (306)
+|
T Consensus 239 GG 240 (302)
T d1gz6a_ 239 AG 240 (302)
T ss_dssp TT
T ss_pred CC
Confidence 65
|
| >d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.56 E-value=4.9e-14 Score=123.04 Aligned_cols=188 Identities=13% Similarity=0.080 Sum_probs=124.0
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhh---hcCCCceeeeccCCCHHHHHHHh-------cCcc
Q 021854 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTAL-------RGVR 165 (306)
Q Consensus 96 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~---~~~~~v~~v~~D~~d~~~l~~~~-------~~~d 165 (306)
..++|+++||||+++||++++++|+++|++|+++.|+.+++++ ........+..|+.+...++..+ ...|
T Consensus 2 slkGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (248)
T d2o23a1 2 SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRVD 81 (248)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCccccccccccccccccccccccccccccc
Confidence 3578999999999999999999999999999999999877433 34567788889999876655443 3457
Q ss_pred EEEEcC-----Cch---------------------------hhhc----------ccccCCCEEEEecCcccccCCCCcc
Q 021854 166 SIICPS-----EGF---------------------------ISNA----------GSLKGVQHVILLSQLSVYRGSGGIQ 203 (306)
Q Consensus 166 ~vi~~~-----~g~---------------------------~~~~----------a~~~gvkr~V~iSS~~~~~~~~~~~ 203 (306)
.+++.. ++. +..+ .+..+-.++|++||..+..+..+..
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~~~~~ 161 (248)
T d2o23a1 82 VAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQA 161 (248)
T ss_dssp EEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCTTCH
T ss_pred ccccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhhccCCCCch
Confidence 777551 110 0011 1122445899999999988777777
Q ss_pred cccchHHH--HHHHHHHHHHHhcCCCEEEEEcCcccCCCCCCcce----eeecCCCC-ccccCHHHHHHHHHHHhhCCCC
Q 021854 204 ALMKGNAR--KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGF----QFEEGCAA-NGSLSKEDAAFICVEALESIPQ 276 (306)
Q Consensus 204 ~~~~~~a~--~~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~~~~----~~~~g~~~-~~~Is~~DVA~~iv~aL~~~~~ 276 (306)
.|..+++. .+.+.....+...||++..|.||++.......... .+...... .-+..++|||.+++++++++--
T Consensus 162 ~Y~asKaal~~lt~~la~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~pl~~R~g~peevA~~v~fL~s~~~i 241 (248)
T d2o23a1 162 AYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLPEKVCNFLASQVPFPSRLGDPAEYAHLVQAIIENPFL 241 (248)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC----------CHHHHTCSSSCSCBCHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHHHHHHHHHhcccCcceeeeccCceecchhhcCCHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHHhCCCC
Confidence 77654432 12233333455689999999999864322111000 01011111 2256889999999999986656
Q ss_pred CCcEEEE
Q 021854 277 TGLIFEV 283 (306)
Q Consensus 277 ~g~~~~v 283 (306)
.|++.+|
T Consensus 242 tGq~I~v 248 (248)
T d2o23a1 242 NGEVIRL 248 (248)
T ss_dssp CSCEEEE
T ss_pred CceEeEC
Confidence 6777765
|
| >d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sepiapterin reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.53 E-value=1.7e-14 Score=126.99 Aligned_cols=187 Identities=13% Similarity=0.052 Sum_probs=121.9
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHH---CCCeEEEEecCcchhhhh-------c-CCCceeeeccCCCHHHHHHHhc---
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIV---KRTRIKALVKDKRNAMES-------F-GTYVESMAGDASNKKFLKTALR--- 162 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~---~g~~V~~l~R~~~~~~~~-------~-~~~v~~v~~D~~d~~~l~~~~~--- 162 (306)
+.+|.++||||+++||++++++|++ +|++|+++.|+.+++++. . +.++..+.+|++|+++++++++
T Consensus 4 L~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~~~ 83 (259)
T d1oaaa_ 4 LGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVR 83 (259)
T ss_dssp CBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHH
Confidence 4579999999999999999999986 799999999999774321 1 2367889999999988887753
Q ss_pred --------CccEEEEcCCc-------h--------------------------hhhcccccC--CCEEEEecCcccccCC
Q 021854 163 --------GVRSIICPSEG-------F--------------------------ISNAGSLKG--VQHVILLSQLSVYRGS 199 (306)
Q Consensus 163 --------~~d~vi~~~~g-------~--------------------------~~~~a~~~g--vkr~V~iSS~~~~~~~ 199 (306)
..|++|++++. . ....+++.+ -.++|++||..+..+.
T Consensus 84 ~~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS~~~~~~~ 163 (259)
T d1oaaa_ 84 ELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPY 163 (259)
T ss_dssp HSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTSCC
T ss_pred HhhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCcccccccccccccCCC
Confidence 23566665321 0 011123332 4589999999988877
Q ss_pred CCcccccchHHHHHHHHHHHH-HHhcCCCEEEEEcCcccCCCC------CCccee---eecCCCCccccCHHHHHHHHHH
Q 021854 200 GGIQALMKGNARKLAEQDESM-LMASGIPYTIIRTGVLQNTPG------GKQGFQ---FEEGCAANGSLSKEDAAFICVE 269 (306)
Q Consensus 200 ~~~~~~~~~~a~~~~~~aE~~-l~~sgi~~tiiRPg~l~~~~~------~~~~~~---~~~g~~~~~~Is~~DVA~~iv~ 269 (306)
.....|..+++.-.. ..+.+ .+..+|++..|.||++..... ...... +........+..++|+|++++.
T Consensus 164 ~~~~~Y~asKaal~~-lt~~la~e~~gIrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~p~evA~~i~~ 242 (259)
T d1oaaa_ 164 KGWGLYCAGKAARDM-LYQVLAAEEPSVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKSDGALVDCGTSAQKLLG 242 (259)
T ss_dssp TTCHHHHHHHHHHHH-HHHHHHHHCTTEEEEEEECCSBSSHHHHHHHHHCSCHHHHHHHHHHHHTTCSBCHHHHHHHHHH
T ss_pred ccchHHHHHHHHHHH-HHHHHHhCCCCCEEEEEEcCCCCCHHHHHhhhcCCCHHHHHHHHhcCCCCCCCCHHHHHHHHHH
Confidence 777777655432211 11111 225789999999998653211 000000 0000111235789999999999
Q ss_pred HhhCCC-CCCcEEEEe
Q 021854 270 ALESIP-QTGLIFEVV 284 (306)
Q Consensus 270 aL~~~~-~~g~~~~v~ 284 (306)
++.+.. ..|+.++|.
T Consensus 243 ll~~~s~~TG~~idv~ 258 (259)
T d1oaaa_ 243 LLQKDTFQSGAHVDFY 258 (259)
T ss_dssp HHHHCCSCTTEEEETT
T ss_pred HhhhccCCCCCeEEec
Confidence 997654 457776653
|
| >d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=99.53 E-value=5.2e-14 Score=124.75 Aligned_cols=190 Identities=10% Similarity=0.055 Sum_probs=122.9
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcch-hh------hhcCCCceeeeccCCCHHHHHHHhc------
Q 021854 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-AM------ESFGTYVESMAGDASNKKFLKTALR------ 162 (306)
Q Consensus 96 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~-~~------~~~~~~v~~v~~D~~d~~~l~~~~~------ 162 (306)
.+.+|+++||||+++||+++++.|+++|++|++++|+.+. ++ ...+.++.++.+|++|++++.+.++
T Consensus 15 sL~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~ 94 (272)
T d1g0oa_ 15 SLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIF 94 (272)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHHHHh
Confidence 3568999999999999999999999999999999887643 11 1234578899999999888776653
Q ss_pred -CccEEEEcCCch------------------------------hhhcccccCCCEEEEecCcccc-cCCCCcccccchHH
Q 021854 163 -GVRSIICPSEGF------------------------------ISNAGSLKGVQHVILLSQLSVY-RGSGGIQALMKGNA 210 (306)
Q Consensus 163 -~~d~vi~~~~g~------------------------------~~~~a~~~gvkr~V~iSS~~~~-~~~~~~~~~~~~~a 210 (306)
.+|++|++++.. ....+.+ -+++++++|..+. .+......|..+++
T Consensus 95 g~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~--~g~~i~i~s~~~~~~~~~~~~~Y~asKa 172 (272)
T d1g0oa_ 95 GKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEI--GGRLILMGSITGQAKAVPKHAVYSGSKG 172 (272)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCT--TCEEEEECCGGGTCSSCSSCHHHHHHHH
T ss_pred CCCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeecccccccccc--ccccccccccccccccccchhhHHHHHH
Confidence 569999884311 0111222 2577778766543 33444444544332
Q ss_pred H--HHHHHHHHHHHhcCCCEEEEEcCcccCCC---------CCCccee--------eecCCCCccccCHHHHHHHHHHHh
Q 021854 211 R--KLAEQDESMLMASGIPYTIIRTGVLQNTP---------GGKQGFQ--------FEEGCAANGSLSKEDAAFICVEAL 271 (306)
Q Consensus 211 ~--~~~~~aE~~l~~sgi~~tiiRPg~l~~~~---------~~~~~~~--------~~~g~~~~~~Is~~DVA~~iv~aL 271 (306)
. .+.+.....+...||++..|.||++.... ....... ........-+..++|||.++++++
T Consensus 173 al~~ltk~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~~~peevA~~v~fL~ 252 (272)
T d1g0oa_ 173 AIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPIDIARVVCFLA 252 (272)
T ss_dssp HHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCTTCSCBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhchhCeEEEEEccCCcCChHHHHHHHhhhhcccccchHHHHHHHHHccCCCCCCcCHHHHHHHHHHHh
Confidence 1 12222333345689999999999864211 0000000 001122234678899999999999
Q ss_pred hCCC--CCCcEEEEecCC
Q 021854 272 ESIP--QTGLIFEVVNGE 287 (306)
Q Consensus 272 ~~~~--~~g~~~~v~~g~ 287 (306)
.+.. -.|+++.|.+|-
T Consensus 253 s~~s~~itG~~i~vDGG~ 270 (272)
T d1g0oa_ 253 SNDGGWVTGKVIGIDGGA 270 (272)
T ss_dssp SGGGTTCCSCEEEESTTC
T ss_pred CchhcCccCceEeECCCC
Confidence 6533 468899998774
|
| >d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.53 E-value=2.4e-14 Score=128.08 Aligned_cols=177 Identities=17% Similarity=0.175 Sum_probs=117.0
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEE---ecCcchh---hh------hcCCCceeeeccCCCHHHHHHHhc----
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKAL---VKDKRNA---ME------SFGTYVESMAGDASNKKFLKTALR---- 162 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l---~R~~~~~---~~------~~~~~v~~v~~D~~d~~~l~~~~~---- 162 (306)
+|.||||||+++||++++++|+++|++|+.+ .|+.+.. .+ ..+.++..+.+|++|.++++++++
T Consensus 2 kkVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~ 81 (285)
T d1jtva_ 2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTE 81 (285)
T ss_dssp CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTT
T ss_pred CCEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhccc
Confidence 4677899999999999999999999876555 4443331 11 123578899999999999988774
Q ss_pred -CccEEEEcCCch------------------------------hhhcccccCCCEEEEecCcccccCCCCcccccchHHH
Q 021854 163 -GVRSIICPSEGF------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR 211 (306)
Q Consensus 163 -~~d~vi~~~~g~------------------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~ 211 (306)
.+|+++++++.. ....+++.+-.++|++||..+..+......|..+++.
T Consensus 82 g~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~~g~~~~~~~~~Y~asKaa 161 (285)
T d1jtva_ 82 GRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFA 161 (285)
T ss_dssp SCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCCTTCHHHHHHHHH
T ss_pred cchhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEechhhcCCCCCchHHHHHHHH
Confidence 359999873310 1122455677899999999998877777778665432
Q ss_pred H--HHHHHHHHHHhcCCCEEEEEcCcccCCCCCCc---c-eeeec-----------------CCCCccccCHHHHHHHHH
Q 021854 212 K--LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQ---G-FQFEE-----------------GCAANGSLSKEDAAFICV 268 (306)
Q Consensus 212 ~--~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~~---~-~~~~~-----------------g~~~~~~Is~~DVA~~iv 268 (306)
- +.+.....+...||+++.|.||++........ . ..... ........+++|||++++
T Consensus 162 l~~l~~~la~El~~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PeeVA~~v~ 241 (285)
T d1jtva_ 162 LEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFREAAQNPEEVAEVFL 241 (285)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHCBCHHHHHHHHH
T ss_pred HHHHHHHHHHHhhccCcEEEEEecCCCCChHHHHhccCHHHHhhccchhHHHHHHHHHHHHhhhhcccCCCHHHHHHHHH
Confidence 2 22333333556899999999998653221100 0 00000 000012567899999999
Q ss_pred HHhhCCC
Q 021854 269 EALESIP 275 (306)
Q Consensus 269 ~aL~~~~ 275 (306)
+++..+.
T Consensus 242 ~~~~~~~ 248 (285)
T d1jtva_ 242 TALRAPK 248 (285)
T ss_dssp HHHHCSS
T ss_pred HHHhCCC
Confidence 9998754
|
| >d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase sniffer species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=99.50 E-value=2.2e-13 Score=118.99 Aligned_cols=180 Identities=13% Similarity=0.119 Sum_probs=114.0
Q ss_pred CCeEEEEcCCChHHHHHHHHHH---HCCCeEEEEecCcchhhhh-----cCCCceeeeccCCCHHHHHHHhc--------
Q 021854 99 RDAVLVTDGDSDIGQMVILSLI---VKRTRIKALVKDKRNAMES-----FGTYVESMAGDASNKKFLKTALR-------- 162 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~---~~g~~V~~l~R~~~~~~~~-----~~~~v~~v~~D~~d~~~l~~~~~-------- 162 (306)
+|+||||||+++||++++++|+ +.|++|++.+|+.+++++. .+.++.++.+|++|.++++++++
T Consensus 2 MKtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~ 81 (248)
T d1snya_ 2 MNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTKD 81 (248)
T ss_dssp CSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHGG
T ss_pred cCEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHhcCCcEEEEEEEeccHHHHHHHHhhhHHHhhc
Confidence 5899999999999999999997 4789999999999874322 24589999999999877765543
Q ss_pred -CccEEEEcCCch-------------------------------hhhcccc-----------cCCCEEEEecCcccccC-
Q 021854 163 -GVRSIICPSEGF-------------------------------ISNAGSL-----------KGVQHVILLSQLSVYRG- 198 (306)
Q Consensus 163 -~~d~vi~~~~g~-------------------------------~~~~a~~-----------~gvkr~V~iSS~~~~~~- 198 (306)
.+|++|++++.. +...+++ .+..++|++||..+...
T Consensus 82 ~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S~~g~~~~ 161 (248)
T d1snya_ 82 QGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQG 161 (248)
T ss_dssp GCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGCSTT
T ss_pred CCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhccccccccccccccccccccccccCC
Confidence 469999874310 0011111 24578999999866432
Q ss_pred --CCCcccccchHHHH--HHHHHHHHHHhcCCCEEEEEcCcccCCCCCCcceeeecCCCCccccCHHHHHHHHHHHhhC-
Q 021854 199 --SGGIQALMKGNARK--LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALES- 273 (306)
Q Consensus 199 --~~~~~~~~~~~a~~--~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~~~~~~~~g~~~~~~Is~~DVA~~iv~aL~~- 273 (306)
..+...|..+++.. +.+.....+...+|+++.|.||++........ .+..+++.+..++.++..
T Consensus 162 ~~~~~~~~Y~aSKaal~~lt~~la~e~~~~gI~vn~v~PG~v~T~m~~~~-----------~~~~~~~~~~~i~~~i~~l 230 (248)
T d1snya_ 162 NTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGSS-----------APLDVPTSTGQIVQTISKL 230 (248)
T ss_dssp CCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCTT-----------CSBCHHHHHHHHHHHHHHC
T ss_pred CCCCChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCCcccCCccccc-----------CCCCchHHHHHHHHHHHhc
Confidence 33344565544321 22223334556899999999998754432111 123344444444444432
Q ss_pred -CCCCCcEEEEecCCcC
Q 021854 274 -IPQTGLIFEVVNGEEK 289 (306)
Q Consensus 274 -~~~~g~~~~v~~g~~s 289 (306)
+...|+.+++.+++.+
T Consensus 231 ~~~~tG~~i~~dG~~ip 247 (248)
T d1snya_ 231 GEKQNGGFVNYDGTPLA 247 (248)
T ss_dssp CGGGTTCEECTTSCBCC
T ss_pred CccCCCcEEEECCeEcC
Confidence 2345777776555444
|
| >d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=99.49 E-value=1.6e-13 Score=118.48 Aligned_cols=182 Identities=16% Similarity=0.183 Sum_probs=119.8
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhc------CccEEEEcCC-
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR------GVRSIICPSE- 172 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~------~~d~vi~~~~- 172 (306)
|++|||||+++||++++++|+++|++|+++.|+.+. .+...+.+|+.+......+.. ..+.++...+
T Consensus 2 K~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~------~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (241)
T d1uaya_ 2 RSALVTGGASGLGRAAALALKARGYRVVVLDLRREG------EDLIYVEGDVTREEDVRRAVARAQEEAPLFAVVSAAGV 75 (241)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCCS------SSSEEEECCTTCHHHHHHHHHHHHHHSCEEEEEECCCC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCccc------ccceEeeccccchhhhHHHHHhhhccccccchhhhhhc
Confidence 899999999999999999999999999999998754 245677899988766555443 2233333211
Q ss_pred -------ch--------------------------hhhc------ccccCCCEEEEecCcccccCCCCcccccchHHHH-
Q 021854 173 -------GF--------------------------ISNA------GSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK- 212 (306)
Q Consensus 173 -------g~--------------------------~~~~------a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~- 212 (306)
+. .... +.+.+-.++|++||..+..+..+...|..+++.-
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~~~~~~Y~asKaal~ 155 (241)
T d1uaya_ 76 GLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAAYAASKGGVV 155 (241)
T ss_dssp CCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCTTCHHHHHHHHHHH
T ss_pred cccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhccCCCCchhhHHHHHHHH
Confidence 00 0000 2234556999999999888777777776554321
Q ss_pred -HHHHHHHHHHhcCCCEEEEEcCcccCCC----CCCcceeeecCCCC-ccccCHHHHHHHHHHHhhCCCCCCcEEEEecC
Q 021854 213 -LAEQDESMLMASGIPYTIIRTGVLQNTP----GGKQGFQFEEGCAA-NGSLSKEDAAFICVEALESIPQTGLIFEVVNG 286 (306)
Q Consensus 213 -~~~~aE~~l~~sgi~~tiiRPg~l~~~~----~~~~~~~~~~g~~~-~~~Is~~DVA~~iv~aL~~~~~~g~~~~v~~g 286 (306)
+.+.....+...||++..|.||++.... .......+...... .-+..++|||.+++++++++.-.|+++.|.+|
T Consensus 156 ~lt~~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~R~g~pedvA~~v~fL~s~~~iTG~~i~VDGG 235 (241)
T d1uaya_ 156 ALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLPEKAKASLAAQVPFPPRLGRPEEYAALVLHILENPMLNGEVVRLDGA 235 (241)
T ss_dssp HHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTSCHHHHHHHHTTCCSSCSCCCHHHHHHHHHHHHHCTTCCSCEEEESTT
T ss_pred HHHHHHHHHHhhcCCceeeecCCcccccccchhhhhHHHHHHhcCCCCCCCcCHHHHHHHHHHHHhCCCCCCCEEEECCc
Confidence 2233333455689999999999964221 10000000011111 23558899999999999876567899999876
Q ss_pred C
Q 021854 287 E 287 (306)
Q Consensus 287 ~ 287 (306)
-
T Consensus 236 ~ 236 (241)
T d1uaya_ 236 L 236 (241)
T ss_dssp C
T ss_pred c
Confidence 3
|
| >d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: ADP-L-glycero-D-mannoheptose 6-epimerase species: Escherichia coli [TaxId: 562]
Probab=99.49 E-value=1.7e-13 Score=121.11 Aligned_cols=194 Identities=13% Similarity=0.022 Sum_probs=109.9
Q ss_pred EEEEcCCChHHHHHHHHHHHCCC-eEEEEecCcc--hhhhhcCCCceeeeccCCCHHHH-HH-----HhcCccEEEEcCC
Q 021854 102 VLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKR--NAMESFGTYVESMAGDASNKKFL-KT-----ALRGVRSIICPSE 172 (306)
Q Consensus 102 ilVtGatG~iG~~l~~~L~~~g~-~V~~l~R~~~--~~~~~~~~~v~~v~~D~~d~~~l-~~-----~~~~~d~vi~~~~ 172 (306)
||||||+||||++++++|+++|+ +|+++.+-.. +..... +....|+.+.+.+ .. .+..+++|+|.++
T Consensus 2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~aa 77 (307)
T d1eq2a_ 2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLV----DLNIADYMDKEDFLIQIMAGEEFGDVEAIFHEGA 77 (307)
T ss_dssp EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGHHHH----TSCCSEEEEHHHHHHHHHTTCCCSSCCEEEECCS
T ss_pred EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCCcchhhccc----ccchhhhccchHHHHHHhhhhcccchhhhhhhcc
Confidence 89999999999999999999996 6777643222 111111 1122333333332 22 2345688888743
Q ss_pred ch--------------------hhhcccccCCCEEEEecCcccccC-CCCcc-----cccchHHHHHHHHHHHHHH----
Q 021854 173 GF--------------------ISNAGSLKGVQHVILLSQLSVYRG-SGGIQ-----ALMKGNARKLAEQDESMLM---- 222 (306)
Q Consensus 173 g~--------------------~~~~a~~~gvkr~V~iSS~~~~~~-~~~~~-----~~~~~~a~~~~~~aE~~l~---- 222 (306)
-. +.+++...+++. |+.||..++.. ..... ....+.+...|..+|.+++
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~-v~~ss~~~~~~~~~~~~~~~~~~~~~~~Y~~~K~~~e~~~~~~~~ 156 (307)
T d1eq2a_ 78 CSSTTEWDGKYMMDNNYQYSKELLHYCLEREIPF-LYASSAATYGGRTSDFIESREYEKPLNVYGYSKFLFDEYVRQILP 156 (307)
T ss_dssp CCCTTCCCHHHHHHHTHHHHHHHHHHHHHHTCCE-EEEEEGGGGTTCCSCBCSSGGGCCCSSHHHHHHHHHHHHHHHHGG
T ss_pred cccccccccccccccccccccccccccccccccc-cccccccccccccccccccccccccccccccccchhhhhcccccc
Confidence 10 334566678874 45555544432 11110 0111223334555555554
Q ss_pred hcCCCEEEEEcCcccCCCC------------------CCccee--eecCCCCccccCHHHHHHHHHHHhhCCCCCCcEEE
Q 021854 223 ASGIPYTIIRTGVLQNTPG------------------GKQGFQ--FEEGCAANGSLSKEDAAFICVEALESIPQTGLIFE 282 (306)
Q Consensus 223 ~sgi~~tiiRPg~l~~~~~------------------~~~~~~--~~~g~~~~~~Is~~DVA~~iv~aL~~~~~~g~~~~ 282 (306)
+.+++++++||..+..... .+.... .+.+.....+++++|+++++..++.++. ...|+
T Consensus 157 ~~~~~~~~~r~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~d~~~~~~~~~~~~~--~~~~~ 234 (307)
T d1eq2a_ 157 EANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGV--SGIFN 234 (307)
T ss_dssp GCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHHHHHHHHHHHHHCC--CEEEE
T ss_pred ccccccccccceeEeeccccccccccccccccccccccccceeeecCccceeeeeeecccHHHHHHHHhhhcc--ccccc
Confidence 4789999999998543211 111111 1344445789999999999999998654 45899
Q ss_pred EecCC-cCHHHHHHHHHHHhh
Q 021854 283 VVNGE-EKVSDWKKCFSRLME 302 (306)
Q Consensus 283 v~~g~-~s~~d~~~l~~~l~~ 302 (306)
++++. .++.++++++.++..
T Consensus 235 ~~~~~~~si~~i~~~i~~~~~ 255 (307)
T d1eq2a_ 235 LGTGRAESFQAVADATLAYHK 255 (307)
T ss_dssp ESCSCCBCHHHHHHHC-----
T ss_pred cccccchhHHHHHHHHHHhcC
Confidence 98766 589999888866544
|
| >d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative carbonyl reductase sniffer species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.48 E-value=2.3e-13 Score=119.05 Aligned_cols=176 Identities=18% Similarity=0.154 Sum_probs=110.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCC--eEEEEecCcchhhhh---cCCCceeeeccCCCHHHHHHHhc---------C
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRT--RIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALR---------G 163 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~--~V~~l~R~~~~~~~~---~~~~v~~v~~D~~d~~~l~~~~~---------~ 163 (306)
.+|+||||||+++||++++++|+++|+ +|++.+|+.+++++. .+.++.++.+|++|.++++++++ +
T Consensus 2 ~~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~~ 81 (250)
T d1yo6a1 2 SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDG 81 (250)
T ss_dssp CCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGGC
T ss_pred cCCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHhhCCceEEEEEecCCHHHHHHHHHHHHHHhCCCC
Confidence 359999999999999999999999995 788899999875443 34578999999999888776542 3
Q ss_pred ccEEEEcCCch-------------------------------hhhcccc-----------cCCCEEEEecCcccccCC--
Q 021854 164 VRSIICPSEGF-------------------------------ISNAGSL-----------KGVQHVILLSQLSVYRGS-- 199 (306)
Q Consensus 164 ~d~vi~~~~g~-------------------------------~~~~a~~-----------~gvkr~V~iSS~~~~~~~-- 199 (306)
+|++|++++-. +...+++ ....+++.+|+.......
T Consensus 82 idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~~~ 161 (250)
T d1yo6a1 82 LSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNT 161 (250)
T ss_dssp CCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTTCC
T ss_pred eEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceeccccccccccccccCCc
Confidence 79999884410 0011111 123578888876554321
Q ss_pred -----CCcccccchHHHH--HHHHHHHHHHhcCCCEEEEEcCcccCCCCCCcceeeecCCCCccccCHHHHHHHHHHHhh
Q 021854 200 -----GGIQALMKGNARK--LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALE 272 (306)
Q Consensus 200 -----~~~~~~~~~~a~~--~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~~~~~~~~g~~~~~~Is~~DVA~~iv~aL~ 272 (306)
.+...|..+++.. +.+.....+...||++..|.||++...... ....+++++.|+.++..+.
T Consensus 162 ~~~~~~~~~aY~aSKaal~~l~~~la~el~~~gI~v~~i~PG~v~T~m~~-----------~~~~~~~e~~a~~~~~~~~ 230 (250)
T d1yo6a1 162 SGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGG-----------KNAALTVEQSTAELISSFN 230 (250)
T ss_dssp STTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC------------------------HHHHHHHHHHHT
T ss_pred ccccchhHHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCCCCCC-----------CCCCCCHHHHHHHHHHHHh
Confidence 1222354443321 122223335568999999999987543221 1235678999999999887
Q ss_pred CCC--CCCcEEEEe
Q 021854 273 SIP--QTGLIFEVV 284 (306)
Q Consensus 273 ~~~--~~g~~~~v~ 284 (306)
.+. ..|+.|+..
T Consensus 231 ~~~~~~sG~f~~~~ 244 (250)
T d1yo6a1 231 KLDNSHNGRFFMRN 244 (250)
T ss_dssp TCCGGGTTCEEETT
T ss_pred cCCCCCCeEEECCC
Confidence 543 457766543
|
| >d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Helicobacter pylori [TaxId: 210]
Probab=99.43 E-value=1.1e-12 Score=115.58 Aligned_cols=191 Identities=13% Similarity=0.017 Sum_probs=120.9
Q ss_pred cCCCeEEEEcCCC--hHHHHHHHHHHHCCCeEEEEecCcch---hhh--hcCCCceeeeccCCCHHHHHHHh-------c
Q 021854 97 EARDAVLVTDGDS--DIGQMVILSLIVKRTRIKALVKDKRN---AME--SFGTYVESMAGDASNKKFLKTAL-------R 162 (306)
Q Consensus 97 ~~~~~ilVtGatG--~iG~~l~~~L~~~g~~V~~l~R~~~~---~~~--~~~~~v~~v~~D~~d~~~l~~~~-------~ 162 (306)
+++|++|||||+| +||++++++|+++|++|+++.|+.+. ..+ .......++..|+++.+.+++++ .
T Consensus 3 L~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g 82 (274)
T d2pd4a1 3 LKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLG 82 (274)
T ss_dssp TTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred CCCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhCCceeEeeecccchhhHHHHHHHHHHHcC
Confidence 4589999999987 79999999999999999999998642 111 12346778899999987766655 4
Q ss_pred CccEEEEcCCch--------h-----------------------hhcccccCC-CEEEEecCcccccCCCCcccccchHH
Q 021854 163 GVRSIICPSEGF--------I-----------------------SNAGSLKGV-QHVILLSQLSVYRGSGGIQALMKGNA 210 (306)
Q Consensus 163 ~~d~vi~~~~g~--------~-----------------------~~~a~~~gv-kr~V~iSS~~~~~~~~~~~~~~~~~a 210 (306)
.+|++|++++.. . .......+- ..++.+|+.+...+......|..+++
T Consensus 83 ~id~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~~~~~~~y~asK~ 162 (274)
T d2pd4a1 83 SLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKYMAHYNVMGLAKA 162 (274)
T ss_dssp CEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTTCHHHHHHHH
T ss_pred CCCeEEeecccccccccccccccccchhhhhhhccccccccccccccccccccCcceeeecccccccccccchhhhHHHH
Confidence 569999874311 0 000111222 24555566665555444444543322
Q ss_pred H--HHHHHHHHHHHhcCCCEEEEEcCcccCCCCCC-c--cee---eecCCCCccccCHHHHHHHHHHHhhCCC--CCCcE
Q 021854 211 R--KLAEQDESMLMASGIPYTIIRTGVLQNTPGGK-Q--GFQ---FEEGCAANGSLSKEDAAFICVEALESIP--QTGLI 280 (306)
Q Consensus 211 ~--~~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~-~--~~~---~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~ 280 (306)
. .+.+.....+...||++..|.||.+....... . ... ...-.....+..++|||.+++.++.+.. -.|++
T Consensus 163 al~~ltr~lA~e~~~~GIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedIA~~v~fL~S~~s~~itG~~ 242 (274)
T d2pd4a1 163 ALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADFRMILKWNEINAPLRKNVSLEEVGNAGMYLLSSLSSGVSGEV 242 (274)
T ss_dssp HHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred HHHHHHHhhHHHhcCcCceecccccCcccCccccccCchHHHHHHHhhhhhccCCcCHHHHHHHHHHHhChhhCCCcCce
Confidence 1 12223333456689999999999865322110 0 000 0011122456789999999999997543 46899
Q ss_pred EEEecCC
Q 021854 281 FEVVNGE 287 (306)
Q Consensus 281 ~~v~~g~ 287 (306)
+.|.+|-
T Consensus 243 i~vDGG~ 249 (274)
T d2pd4a1 243 HFVDAGY 249 (274)
T ss_dssp EEESTTG
T ss_pred EEECCCh
Confidence 9998874
|
| >d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 11-beta-hydroxysteroid dehydrogenase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.42 E-value=8.8e-13 Score=116.56 Aligned_cols=173 Identities=12% Similarity=0.091 Sum_probs=116.6
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhh-------hcCCCceeeeccCCCHHHHHHH-------hc
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME-------SFGTYVESMAGDASNKKFLKTA-------LR 162 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~-------~~~~~v~~v~~D~~d~~~l~~~-------~~ 162 (306)
..+|+++||||+++||++++++|+++|++|+++.|+.+++++ ..+..+..+.+|..+.+.+... +.
T Consensus 12 L~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g 91 (269)
T d1xu9a_ 12 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMG 91 (269)
T ss_dssp GTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHT
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHHHHHHhC
Confidence 678999999999999999999999999999999999987432 2345677888999987665543 34
Q ss_pred CccEEEEcCCch------------------------------hhhcccccCCCEEEEecCcccccCCCCcccccchHHHH
Q 021854 163 GVRSIICPSEGF------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK 212 (306)
Q Consensus 163 ~~d~vi~~~~g~------------------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~ 212 (306)
..|+++++++.. ....+++ +-.++|++||..+..+......|..+++.-
T Consensus 92 ~~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~-~~G~ii~isS~~~~~~~p~~~~Y~asKaal 170 (269)
T d1xu9a_ 92 GLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQ-SNGSIVVVSSLAGKVAYPMVAAYSASKFAL 170 (269)
T ss_dssp SCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH-HTCEEEEEEEGGGTSCCTTCHHHHHHHHHH
T ss_pred CccccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHh-cCCcceEeccchhcCCCCCchHHHHHHHHH
Confidence 568888873311 1112332 347899999999888877777786654422
Q ss_pred --HHHHHHHHHH--hcCCCEEEEEcCcccCCCCCCcceeeecCCCCccccCHHHHHHHHHHHhhCC
Q 021854 213 --LAEQDESMLM--ASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESI 274 (306)
Q Consensus 213 --~~~~aE~~l~--~sgi~~tiiRPg~l~~~~~~~~~~~~~~g~~~~~~Is~~DVA~~iv~aL~~~ 274 (306)
+.+.....+. ..+|+++.|.||++...... +. . .+......++++++|+.++..+...
T Consensus 171 ~~~~~~La~El~~~~~~I~V~~v~PG~v~T~~~~-~~--~-~~~~~~~~~~~e~~a~~i~~~~~~~ 232 (269)
T d1xu9a_ 171 DGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAM-KA--V-SGIVHMQAAPKEECALEIIKGGALR 232 (269)
T ss_dssp HHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHHH-HH--S-CGGGGGGCBCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhhhcCCCEEEEEEecCcCCCcHHH-Hh--c-cCCccccCCCHHHHHHHHHHHhhcC
Confidence 1221111122 34688999999986532110 00 0 1111234578899999999877644
|
| >d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Escherichia coli [TaxId: 562]
Probab=99.41 E-value=1.9e-12 Score=113.11 Aligned_cols=191 Identities=13% Similarity=0.050 Sum_probs=122.8
Q ss_pred cCCCeEEEEcCCC--hHHHHHHHHHHHCCCeEEEEecCcchhh---hh--cCCCceeeeccCCCHHHHHHHhc-------
Q 021854 97 EARDAVLVTDGDS--DIGQMVILSLIVKRTRIKALVKDKRNAM---ES--FGTYVESMAGDASNKKFLKTALR------- 162 (306)
Q Consensus 97 ~~~~~ilVtGatG--~iG~~l~~~L~~~g~~V~~l~R~~~~~~---~~--~~~~v~~v~~D~~d~~~l~~~~~------- 162 (306)
+.+|+||||||+| +||+++++.|+++|++|++..|+.+... +. .......+..|+.+..++...+.
T Consensus 3 L~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (258)
T d1qsga_ 3 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWP 82 (258)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCS
T ss_pred CCCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHhhcCCcceeecccchHHHHHHHHHHhhhccc
Confidence 4589999999998 8999999999999999999999865421 11 12456788889998777666553
Q ss_pred CccEEEEcCCc---h----------------------------hhhccc--ccCCCEEEEecCcccccCCCCcccccchH
Q 021854 163 GVRSIICPSEG---F----------------------------ISNAGS--LKGVQHVILLSQLSVYRGSGGIQALMKGN 209 (306)
Q Consensus 163 ~~d~vi~~~~g---~----------------------------~~~~a~--~~gvkr~V~iSS~~~~~~~~~~~~~~~~~ 209 (306)
..|++|+++.. . +...+. ..+-+.+|++||..+..+.+....|..++
T Consensus 83 ~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ii~iss~~~~~~~~~~~~Y~~sK 162 (258)
T d1qsga_ 83 KFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPNYNVMGLAK 162 (258)
T ss_dssp SEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTTTTHHHHHH
T ss_pred ccceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccCCcEEEEecchhhccCCCCcHHHHHHH
Confidence 34888887321 0 000010 12234688899988776655556665543
Q ss_pred HHH--HHHHHHHHHHhcCCCEEEEEcCcccCCCCCCc---ceee---ecCCCCccccCHHHHHHHHHHHhhCC--CCCCc
Q 021854 210 ARK--LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQ---GFQF---EEGCAANGSLSKEDAAFICVEALESI--PQTGL 279 (306)
Q Consensus 210 a~~--~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~~---~~~~---~~g~~~~~~Is~~DVA~~iv~aL~~~--~~~g~ 279 (306)
+.- +.+..-..+..++|++..|+||++........ .... ..-....-+..+||||.++++++.+. .-.|+
T Consensus 163 aal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~R~~~peeia~~v~fL~s~~s~~itG~ 242 (258)
T d1qsga_ 163 ASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAAFLCSDLSAGISGE 242 (258)
T ss_dssp HHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHTSGGGTTCCSC
T ss_pred HHHHHHHHHHHHHhCccCceeecccccccccccccccchhhhHHHHHHhCCCCCCCcCHHHHHHHHHHHhCchhcCccCc
Confidence 321 22333334556899999999999653321110 0000 00011123678899999999999653 35688
Q ss_pred EEEEecCC
Q 021854 280 IFEVVNGE 287 (306)
Q Consensus 280 ~~~v~~g~ 287 (306)
++.|.+|-
T Consensus 243 ~i~vDGG~ 250 (258)
T d1qsga_ 243 VVHVDGGF 250 (258)
T ss_dssp EEEESTTG
T ss_pred eEEECcCH
Confidence 99998774
|
| >d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.38 E-value=2.6e-12 Score=113.74 Aligned_cols=74 Identities=16% Similarity=0.169 Sum_probs=60.3
Q ss_pred CCeE-EEEcCCChHHHHHHHHHHHC-CCeEEEEecCcchhhh------hcCCCceeeeccCCCHHHHHHHh-------cC
Q 021854 99 RDAV-LVTDGDSDIGQMVILSLIVK-RTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTAL-------RG 163 (306)
Q Consensus 99 ~~~i-lVtGatG~iG~~l~~~L~~~-g~~V~~l~R~~~~~~~------~~~~~v~~v~~D~~d~~~l~~~~-------~~ 163 (306)
+|+| |||||+++||++++++|+++ |++|++.+|+.+++++ ..+.++.++.+|++|.+++++++ ..
T Consensus 2 g~rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~g~ 81 (275)
T d1wmaa1 2 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGG 81 (275)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred CCeEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhcCC
Confidence 4556 89999999999999999986 8999999999987432 12457899999999998877654 35
Q ss_pred ccEEEEcCC
Q 021854 164 VRSIICPSE 172 (306)
Q Consensus 164 ~d~vi~~~~ 172 (306)
+|++|++++
T Consensus 82 iDiLVnNAG 90 (275)
T d1wmaa1 82 LDVLVNNAG 90 (275)
T ss_dssp EEEEEECCC
T ss_pred cEEEEEcCC
Confidence 799998844
|
| >d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Leishmania major [TaxId: 5664]
Probab=99.37 E-value=6.4e-12 Score=110.94 Aligned_cols=188 Identities=11% Similarity=0.012 Sum_probs=117.7
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcch-h-------hhhcCCCcee-----------------eeccCCCH
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-A-------MESFGTYVES-----------------MAGDASNK 154 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~-~-------~~~~~~~v~~-----------------v~~D~~d~ 154 (306)
..++||||+++||++++++|+++|++|++..|+.+. . ....+..... +.+|+++.
T Consensus 3 pVAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~dv~~~ 82 (284)
T d1e7wa_ 3 PVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTLF 82 (284)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHhhcCCceEEEEeecccccccccccccccccCCCH
Confidence 568999999999999999999999999998876543 1 1112223333 44568887
Q ss_pred HHHHHHh-------cCccEEEEcCCch-----------------------------hh--h-------------------
Q 021854 155 KFLKTAL-------RGVRSIICPSEGF-----------------------------IS--N------------------- 177 (306)
Q Consensus 155 ~~l~~~~-------~~~d~vi~~~~g~-----------------------------~~--~------------------- 177 (306)
+++++++ ..+|++|++++.. +. +
T Consensus 83 ~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~ 162 (284)
T d1e7wa_ 83 TRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTP 162 (284)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSC
T ss_pred HHHHHHHHHHHHHhCCCCEEEecCCccCCCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccchhhhhH
Confidence 7777665 4679999984421 00 0
Q ss_pred cccccCCCEEEEecCcccccCCCCcccccchHHHH--HHHHHHHHHHhcCCCEEEEEcCcccCCCCCCcce--eeecCCC
Q 021854 178 AGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK--LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGF--QFEEGCA 253 (306)
Q Consensus 178 ~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~--~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~~~~--~~~~g~~ 253 (306)
...+.+..++|++++.....+..+...|..+++.- +.+.....+...||++..|.||+........... .+.....
T Consensus 163 ~~~~~~~~~ii~~~s~~~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~t~~~~~~~~~~~~~~~~~~p 242 (284)
T d1e7wa_ 163 AKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVDDMPPAVWEGHRSKVP 242 (284)
T ss_dssp GGGSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGGGSCHHHHHHHHTTCT
T ss_pred HHhcCCCCcccccccccccCCccceeeeccccccchhhhHHHHHHhCCccccccccccccccccccCCHHHHHHHHhcCC
Confidence 01123345788888887777666666776544321 2233333455689999999999732111100000 0001111
Q ss_pred C-ccccCHHHHHHHHHHHhhCCC--CCCcEEEEecCC
Q 021854 254 A-NGSLSKEDAAFICVEALESIP--QTGLIFEVVNGE 287 (306)
Q Consensus 254 ~-~~~Is~~DVA~~iv~aL~~~~--~~g~~~~v~~g~ 287 (306)
. .-+..++|||.++++++.+.. -.|+++.|.+|-
T Consensus 243 l~~R~~~peeiA~~v~fL~S~~s~~itG~~i~VDGG~ 279 (284)
T d1e7wa_ 243 LYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGY 279 (284)
T ss_dssp TTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred CCCCCCCHHHHHHHHHHHhCchhcCccCCeEEECcCh
Confidence 1 235689999999999996543 468999998774
|
| >d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.36 E-value=1.8e-12 Score=112.33 Aligned_cols=173 Identities=13% Similarity=0.103 Sum_probs=109.9
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHH-------HHhc--CccEEEE
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLK-------TALR--GVRSIIC 169 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~-------~~~~--~~d~vi~ 169 (306)
+|+|+||||+++||++++++|+++|++|.++.|...... .....+..|..+.+..+ +.+. .+|++|+
T Consensus 2 gK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iD~lIn 77 (236)
T d1dhra_ 2 ARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA----SASVIVKMTDSFTEQADQVTAEVGKLLGDQKVDAILC 77 (236)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS----SEEEECCCCSCHHHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc----cccceeecccCcHHHHHHHHHHHHHHhCCCCceEEEE
Confidence 799999999999999999999999999999988765421 12233444554433322 2333 3799998
Q ss_pred cCCch-------------------------------hhhcccccCCCEEEEecCcccccCCCCcccccchHHHHHHHHHH
Q 021854 170 PSEGF-------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDE 218 (306)
Q Consensus 170 ~~~g~-------------------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~~~~~aE 218 (306)
+++++ ....+++. .++|++||..+..+......|..+++. ....-
T Consensus 78 nAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~--G~Iv~isS~~~~~~~~~~~~Y~asKaa--l~~lt 153 (236)
T d1dhra_ 78 VAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEG--GLLTLAGAKAALDGTPGMIGYGMAKGA--VHQLC 153 (236)
T ss_dssp CCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE--EEEEEECCGGGGSCCTTBHHHHHHHHH--HHHHH
T ss_pred CCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccc--cceeEEccHHHcCCccCCcccHHHHHH--HHHHH
Confidence 85421 01112222 689999999988877777777654332 11111
Q ss_pred HHHH------hcCCCEEEEEcCcccCCCCCCcceeeecCCCCccccCHHHHHHHHHHHhhCCC--CCCcEEEE
Q 021854 219 SMLM------ASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEV 283 (306)
Q Consensus 219 ~~l~------~sgi~~tiiRPg~l~~~~~~~~~~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~~~v 283 (306)
+.++ ..+|++..|.||++....... .. .......+++++++|+.+..++.... ..|..+.|
T Consensus 154 ~~la~El~~~~~gI~vn~v~PG~v~T~~~~~---~~-~~~~~~~~~~pe~va~~~~~l~s~~~~~i~G~~i~v 222 (236)
T d1dhra_ 154 QSLAGKNSGMPSGAAAIAVLPVTLDTPMNRK---SM-PEADFSSWTPLEFLVETFHDWITGNKRPNSGSLIQV 222 (236)
T ss_dssp HHHTSTTSSCCTTCEEEEEEESCEECHHHHH---HS-TTSCGGGSEEHHHHHHHHHHHHTTTTCCCTTCEEEE
T ss_pred HHHHHHhccCCCcEEEEEEEeccCcCCcchh---hC-ccchhhcCCCHHHHHHHHHHHhCCCccCCCCCeEEE
Confidence 2222 257999999999864321100 00 11112356789999999999987543 45666665
|
| >d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Trypanosoma cruzi [TaxId: 5693]
Probab=99.34 E-value=1.6e-11 Score=107.20 Aligned_cols=188 Identities=14% Similarity=0.098 Sum_probs=116.7
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhh--------hcCCCceeeeccCCC----HHHHH-------HH
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME--------SFGTYVESMAGDASN----KKFLK-------TA 160 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~--------~~~~~v~~v~~D~~d----~~~l~-------~~ 160 (306)
.++|||||+++||++++++|+++|++|++..|+.++..+ ..+.....+..|..+ .+.+. +.
T Consensus 2 ~vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (266)
T d1mxha_ 2 PAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRA 81 (266)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHHHhhcCCceEEEecccccchhHHHHHHHHHHHHHHH
Confidence 478999999999999999999999999999999765321 123455555555543 23232 33
Q ss_pred hcCccEEEEcCCch------------------hhh-----------------------c-----ccccCCCEEEEecCcc
Q 021854 161 LRGVRSIICPSEGF------------------ISN-----------------------A-----GSLKGVQHVILLSQLS 194 (306)
Q Consensus 161 ~~~~d~vi~~~~g~------------------~~~-----------------------~-----a~~~gvkr~V~iSS~~ 194 (306)
+..+|++|++++.. ..+ . ........++.+|+..
T Consensus 82 ~g~iDilvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (266)
T d1mxha_ 82 FGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAM 161 (266)
T ss_dssp HSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECCGG
T ss_pred hCCCCEEEECCccCCCCcccccccccchhcccccccccccccccccccccchhhhhccccccccccccccccchhhhhcc
Confidence 45689999974310 000 0 0012334677778877
Q ss_pred cccCCCCcccccchHHH--HHHHHHHHHHHhcCCCEEEEEcCcccCCCCCCcce--eeecCCCC-ccccCHHHHHHHHHH
Q 021854 195 VYRGSGGIQALMKGNAR--KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGF--QFEEGCAA-NGSLSKEDAAFICVE 269 (306)
Q Consensus 195 ~~~~~~~~~~~~~~~a~--~~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~~~~~--~~~~g~~~-~~~Is~~DVA~~iv~ 269 (306)
...+......|..+++. .+.+.....+...||++..|.||++.......... .+...... ..+.+++|||.++++
T Consensus 162 ~~~~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~t~~~~~~~~~~~~~~~~pl~r~~~~peeva~~v~f 241 (266)
T d1mxha_ 162 TDLPLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPAMPQETQEEYRRKVPLGQSEASAAQIADAIAF 241 (266)
T ss_dssp GGSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCSSSCHHHHHHHHTTCTTTSCCBCHHHHHHHHHH
T ss_pred ccccCcchhhhhhhHHHHhhhHHHHHHHhCccCcEEEEeccCcEeccccCCHHHHHHHHhcCCCCCCCCCHHHHHHHHHH
Confidence 77666666666554332 12233333455689999999999854222111100 01111111 223689999999999
Q ss_pred HhhCCC--CCCcEEEEecCC
Q 021854 270 ALESIP--QTGLIFEVVNGE 287 (306)
Q Consensus 270 aL~~~~--~~g~~~~v~~g~ 287 (306)
++.+.. -.|+++.|.+|-
T Consensus 242 L~s~~s~~itG~~i~vDGG~ 261 (266)
T d1mxha_ 242 LVSKDAGYITGTTLKVDGGL 261 (266)
T ss_dssp HHSGGGTTCCSCEEEESTTG
T ss_pred HhCchhCCccCCeEEECccH
Confidence 997643 478999998774
|
| >d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]
Probab=99.29 E-value=1.3e-11 Score=108.02 Aligned_cols=192 Identities=10% Similarity=0.044 Sum_probs=117.2
Q ss_pred cCCCeEEEEcCCC--hHHHHHHHHHHHCCCeEEEEecCcchh----hhhcCCCceeeeccCCCHHHHHHHh---------
Q 021854 97 EARDAVLVTDGDS--DIGQMVILSLIVKRTRIKALVKDKRNA----MESFGTYVESMAGDASNKKFLKTAL--------- 161 (306)
Q Consensus 97 ~~~~~ilVtGatG--~iG~~l~~~L~~~g~~V~~l~R~~~~~----~~~~~~~v~~v~~D~~d~~~l~~~~--------- 161 (306)
+.+|++|||||+| +||++++++|+++|++|++..|+.++. .+..+.+...+.+|+++.++++.++
T Consensus 4 l~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~v~~~~~~ 83 (268)
T d2h7ma1 4 LDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIGA 83 (268)
T ss_dssp TTTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHCT
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHcCCceeeEeeecccccccccccchhhhcccc
Confidence 4589999999754 699999999999999999999988763 2344567888999999986655443
Q ss_pred -cCccEEEEcCCch---------hhh----------------------cc-cccCCCEEEEecCcccccCCCCcccccch
Q 021854 162 -RGVRSIICPSEGF---------ISN----------------------AG-SLKGVQHVILLSQLSVYRGSGGIQALMKG 208 (306)
Q Consensus 162 -~~~d~vi~~~~g~---------~~~----------------------~a-~~~gvkr~V~iSS~~~~~~~~~~~~~~~~ 208 (306)
..+|+++++++.. +.+ .. ...+...+++++|.......+....|..+
T Consensus 84 ~~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~p~~~~y~~s 163 (268)
T d2h7ma1 84 GNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPSRAMPAYNWMTVA 163 (268)
T ss_dssp TCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCSSCCTTTHHHHHH
T ss_pred CCCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhhcccccccccccccccccCcccchhhcc
Confidence 2358888873310 000 01 11112234445554444444444455433
Q ss_pred HH--HHHHHHHHHHHHhcCCCEEEEEcCcccCCC--------CCCccee--------eecCCC-CccccCHHHHHHHHHH
Q 021854 209 NA--RKLAEQDESMLMASGIPYTIIRTGVLQNTP--------GGKQGFQ--------FEEGCA-ANGSLSKEDAAFICVE 269 (306)
Q Consensus 209 ~a--~~~~~~aE~~l~~sgi~~tiiRPg~l~~~~--------~~~~~~~--------~~~g~~-~~~~Is~~DVA~~iv~ 269 (306)
++ ..+.+.....+...+|++..|.||.+.... ....... +..... ...+..++|||.+++.
T Consensus 164 K~a~~~ltr~lA~e~~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~rr~~~p~dva~~v~f 243 (268)
T d2h7ma1 164 KSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIGWNMKDATPVAKTVCA 243 (268)
T ss_dssp HHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHCTTCCCTTCCHHHHHHHHH
T ss_pred ccchhhccccchhhhhccCCcceEEecCCCCChhhhhhccchhhhhhccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHH
Confidence 22 112233334455679999999999864221 1000000 000011 1236678999999999
Q ss_pred HhhCCC--CCCcEEEEecCCc
Q 021854 270 ALESIP--QTGLIFEVVNGEE 288 (306)
Q Consensus 270 aL~~~~--~~g~~~~v~~g~~ 288 (306)
++.+.. -.|+++.|.+|-.
T Consensus 244 L~Sd~a~~iTG~~i~vDGG~~ 264 (268)
T d2h7ma1 244 LLSDWLPATTGDIIYADGGAH 264 (268)
T ss_dssp HHSSSCTTCCSEEEEESTTGG
T ss_pred HhCchhcCccCCEEEECcCcc
Confidence 996432 4688999988764
|
| >d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.29 E-value=6.9e-12 Score=108.40 Aligned_cols=174 Identities=9% Similarity=0.077 Sum_probs=109.4
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHH-------HHHHh--cCccEEEE
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKF-------LKTAL--RGVRSIIC 169 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~-------l~~~~--~~~d~vi~ 169 (306)
..+|+||||+++||++++++|+++|++|+++.|+++... .....+.+|..+.+. +...+ ..+|++|+
T Consensus 2 ~gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iD~lin 77 (235)
T d1ooea_ 2 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA----DSNILVDGNKNWTEQEQSILEQTASSLQGSQVDGVFC 77 (235)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS----SEEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhcc----cccceeccccCchhHHHHHHHHHHHHhcCCCeeEEEE
Confidence 357999999999999999999999999999999875422 122334455554322 22333 34799999
Q ss_pred cCCch-------------------------------hhhcccccCCCEEEEecCcccccCCCCcccccchHHHHHHHHHH
Q 021854 170 PSEGF-------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDE 218 (306)
Q Consensus 170 ~~~g~-------------------------------~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~~~~~aE 218 (306)
+++.+ ....+++. .++|++||..+..+......|..+++.- ...-
T Consensus 78 nAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~--g~Iv~isS~~~~~~~~~~~~Y~asKaal--~~l~ 153 (235)
T d1ooea_ 78 VAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPG--GLLQLTGAAAAMGPTPSMIGYGMAKAAV--HHLT 153 (235)
T ss_dssp CCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE--EEEEEECCGGGGSCCTTBHHHHHHHHHH--HHHH
T ss_pred CCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccc--eEEEEeccHHhcCCcccccchHHHHHHH--HHHH
Confidence 85421 01112222 6899999999888877777776543321 1111
Q ss_pred HHHH------hcCCCEEEEEcCcccCCCCCCcceeeecCCCCccccCHHHHHHHHHHHhhCCC---CCCcEEEEe
Q 021854 219 SMLM------ASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIP---QTGLIFEVV 284 (306)
Q Consensus 219 ~~l~------~sgi~~tiiRPg~l~~~~~~~~~~~~~~g~~~~~~Is~~DVA~~iv~aL~~~~---~~g~~~~v~ 284 (306)
+.+. ..++++..|.||++..... +.. + .......+++++|+|+.++..+..+. ..|..+.|.
T Consensus 154 ~~la~e~~~~~~~i~v~~i~Pg~~~T~~~--~~~-~-~~~~~~~~~~~~~va~~~~~~l~~~~~~~~tG~~i~v~ 224 (235)
T d1ooea_ 154 SSLAAKDSGLPDNSAVLTIMPVTLDTPMN--RKW-M-PNADHSSWTPLSFISEHLLKWTTETSSRPSSGALLKIT 224 (235)
T ss_dssp HHHHSTTSSCCTTCEEEEEEESCBCCHHH--HHH-S-TTCCGGGCBCHHHHHHHHHHHHHCGGGCCCTTCEEEEE
T ss_pred HHHHHHhccCCCceEEEEEecCcCcCcch--hhh-C-cCCccccCCCHHHHHHHHHHHhcCccccCCCceEEEEE
Confidence 1121 1467888899998643211 000 1 11122457889999999987775543 457777774
|
| >d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylene-tetrahydromethanopterin dehydrogenase species: Methylobacterium extorquens [TaxId: 408]
Probab=99.12 E-value=5.8e-11 Score=99.38 Aligned_cols=77 Identities=12% Similarity=0.124 Sum_probs=66.5
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh---cC--CCceeeeccCCCHHHHHHHhcCccEEEEc
Q 021854 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FG--TYVESMAGDASNKKFLKTALRGVRSIICP 170 (306)
Q Consensus 96 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~---~~--~~v~~v~~D~~d~~~l~~~~~~~d~vi~~ 170 (306)
...+|+|+||||+|+||++++++|+++|++|+++.|+.++..+. +. ..+.+..+|+.|.+.+++++.++|+||++
T Consensus 20 ~l~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~iDilin~ 99 (191)
T d1luaa1 20 SVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVKGAHFVFTA 99 (191)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTTTCSEEEEC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhccchhhhhhhcccHHHHHHHhcCcCeeeec
Confidence 45689999999999999999999999999999999999874322 11 35678889999999999999999999997
Q ss_pred CC
Q 021854 171 SE 172 (306)
Q Consensus 171 ~~ 172 (306)
++
T Consensus 100 Ag 101 (191)
T d1luaa1 100 GA 101 (191)
T ss_dssp CC
T ss_pred Cc
Confidence 43
|
| >d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha-hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=99.10 E-value=1.7e-09 Score=93.64 Aligned_cols=177 Identities=12% Similarity=0.104 Sum_probs=97.4
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHh--------cCccEEEEc
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTAL--------RGVRSIICP 170 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~--------~~~d~vi~~ 170 (306)
+|.|+||||+++||++++++|+++|++|++++|+.+.. ..|+.+.+..+... ..+|+++++
T Consensus 1 mkVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~~~-----------~~d~~~~~~~~~~~~~~~~~~~~~id~lv~~ 69 (257)
T d1fjha_ 1 MSIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEV-----------IADLSTAEGRKQAIADVLAKCSKGMDGLVLC 69 (257)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSE-----------ECCTTSHHHHHHHHHHHHTTCTTCCSEEEEC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChHHH-----------HHHhcCHHHHHHHHHHHHHHhCCCCcEEEEc
Confidence 47899999999999999999999999999999876432 34555544433221 346888876
Q ss_pred CCc-h----------------------hhhcccccCCCEEEEecCccccc---------------------------CC-
Q 021854 171 SEG-F----------------------ISNAGSLKGVQHVILLSQLSVYR---------------------------GS- 199 (306)
Q Consensus 171 ~~g-~----------------------~~~~a~~~gvkr~V~iSS~~~~~---------------------------~~- 199 (306)
++- . ..+...+........+++..... ..
T Consensus 70 Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~i~s~~~~~~~~ 149 (257)
T d1fjha_ 70 AGLGPQTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQ 149 (257)
T ss_dssp CCCCTTCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHHHHHHHTCCTT
T ss_pred CCCCCcHHHHHHHHHHHHHHHHHHHHHhhhhhhhhccCcceeeeeccccchhhhhhhhhhhccCCcEEEEeeehhccCCC
Confidence 321 0 00111222333444444332211 11
Q ss_pred CCcccccchHHH--HHHHHHHHHHHhcCCCEEEEEcCcccCCCCC----Cc--ceeeecC-CCCccccCHHHHHHHHHHH
Q 021854 200 GGIQALMKGNAR--KLAEQDESMLMASGIPYTIIRTGVLQNTPGG----KQ--GFQFEEG-CAANGSLSKEDAAFICVEA 270 (306)
Q Consensus 200 ~~~~~~~~~~a~--~~~~~aE~~l~~sgi~~tiiRPg~l~~~~~~----~~--~~~~~~g-~~~~~~Is~~DVA~~iv~a 270 (306)
.+...|..+++. .+.+..-..+...||++..|.||++...... .. ...+... ....-+.+++|||.+++++
T Consensus 150 ~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~PlgR~g~p~eva~~v~fL 229 (257)
T d1fjha_ 150 GGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGESIAKFVPPMGRRAEPSEMASVIAFL 229 (257)
T ss_dssp HHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC---------------------CCCSTTSCCCTHHHHHHHHHH
T ss_pred cchHHHHHHhhhhhccccccccccccccccccccccCCcCChhHHhhcCCHHHHHHHHhcCCCCCCCcCHHHHHHHHHHH
Confidence 111123322211 1112222334568999999999986422110 00 0001011 1123356789999999999
Q ss_pred hhCCC--CCCcEEEEecC
Q 021854 271 LESIP--QTGLIFEVVNG 286 (306)
Q Consensus 271 L~~~~--~~g~~~~v~~g 286 (306)
+.+.. -.|+++.|.+|
T Consensus 230 ~S~~s~~itG~~i~vDGG 247 (257)
T d1fjha_ 230 MSPAASYVHGAQIVIDGG 247 (257)
T ss_dssp TSGGGTTCCSCEEEESTT
T ss_pred hCchhCCccCceEEeCCC
Confidence 86433 46899999876
|
| >d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=99.04 E-value=3.6e-09 Score=93.52 Aligned_cols=192 Identities=12% Similarity=0.041 Sum_probs=105.6
Q ss_pred ccCCCeEEEEcCCC--hHHHHHHHHHHHCCCeEEEEecCcchhh------------hh-cC--C--Cc-eeeecc-----
Q 021854 96 EEARDAVLVTDGDS--DIGQMVILSLIVKRTRIKALVKDKRNAM------------ES-FG--T--YV-ESMAGD----- 150 (306)
Q Consensus 96 ~~~~~~ilVtGatG--~iG~~l~~~L~~~g~~V~~l~R~~~~~~------------~~-~~--~--~v-~~v~~D----- 150 (306)
++.+|++|||||+| +||+++++.|+++|++|++..|+..... .. .. . .. .....|
T Consensus 5 ~L~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (297)
T d1d7oa_ 5 DLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVFDN 84 (297)
T ss_dssp CCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTCCS
T ss_pred CCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchhhhhhHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhhccc
Confidence 45689999999987 8999999999999999999988653200 00 00 0 00 111111
Q ss_pred ------------------CCCH----HHHHHHhcCccEEEEcCCch------hhh----------------------ccc
Q 021854 151 ------------------ASNK----KFLKTALRGVRSIICPSEGF------ISN----------------------AGS 180 (306)
Q Consensus 151 ------------------~~d~----~~l~~~~~~~d~vi~~~~g~------~~~----------------------~a~ 180 (306)
..+. +.+.+.+..+|++|++++.. +.+ ++.
T Consensus 85 ~~~~~~dv~~~~~~~~~~~~~~~~~~~~~~~~~G~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~ 164 (297)
T d1d7oa_ 85 PEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFL 164 (297)
T ss_dssp GGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHG
T ss_pred cccchhhhhhhhhhhhccHHHHHHHHHHHHHHhCCCcccccccccccccccchhhhhcccccccccchhhhhhhhhhHHH
Confidence 1122 22334456789999874310 000 000
Q ss_pred --ccCCCEEEEecCccccc-CCCCcccccchHHHH--HHH-HHHHHHHhcCCCEEEEEcCcccCCCCCCccee------e
Q 021854 181 --LKGVQHVILLSQLSVYR-GSGGIQALMKGNARK--LAE-QDESMLMASGIPYTIIRTGVLQNTPGGKQGFQ------F 248 (306)
Q Consensus 181 --~~gvkr~V~iSS~~~~~-~~~~~~~~~~~~a~~--~~~-~aE~~l~~sgi~~tiiRPg~l~~~~~~~~~~~------~ 248 (306)
...-++.+.+++.+... .......|...++.. +.+ .+.++....+|++..|.||++........... .
T Consensus 165 ~~~~~~g~~~~~~~~~~~~~~~~~~~~y~~aKaa~~~l~~~~a~e~~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~ 244 (297)
T d1d7oa_ 165 PIMNPGGASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGFIDTMIEYS 244 (297)
T ss_dssp GGEEEEEEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCCSHHHHHHHHH
T ss_pred HHhhcCCcceeeeehhhcccccccccceecccccccccccccchhccccceEEecccccccccchhhhhccCCHHHHHHH
Confidence 01112455555544433 233333454332211 111 22222235799999999999754332111000 0
Q ss_pred ecCCCCccccCHHHHHHHHHHHhhCCC--CCCcEEEEecCC
Q 021854 249 EEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVNGE 287 (306)
Q Consensus 249 ~~g~~~~~~Is~~DVA~~iv~aL~~~~--~~g~~~~v~~g~ 287 (306)
.......-+..++|||.++++++.+.. -.|+++.|.+|-
T Consensus 245 ~~~~PlgR~~~peevA~~v~fL~S~~a~~itGq~i~vDGG~ 285 (297)
T d1d7oa_ 245 YNNAPIQKTLTADEVGNAAAFLVSPLASAITGATIYVDNGL 285 (297)
T ss_dssp HHHSSSCCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred HhCCCCCCCCCHHHHHHHHHHHhCchhcCCcCceEEECcCH
Confidence 011112235689999999999996533 478999998774
|
| >d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=98.75 E-value=4.9e-08 Score=87.88 Aligned_cols=36 Identities=11% Similarity=0.043 Sum_probs=31.4
Q ss_pred CCeEEEEcC--CChHHHHHHHHHHHCCCeEEEEecCcc
Q 021854 99 RDAVLVTDG--DSDIGQMVILSLIVKRTRIKALVKDKR 134 (306)
Q Consensus 99 ~~~ilVtGa--tG~iG~~l~~~L~~~g~~V~~l~R~~~ 134 (306)
.|.+||||| +.+||++++++|+++|++|++..|...
T Consensus 2 ~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~ 39 (329)
T d1uh5a_ 2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPV 39 (329)
T ss_dssp CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGG
T ss_pred CcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchh
Confidence 588999994 469999999999999999999877653
|
| >d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn Mja218 species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=98.57 E-value=1e-07 Score=74.20 Aligned_cols=89 Identities=18% Similarity=0.132 Sum_probs=71.6
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcC-CCceeeeccCCCHHHHHHH-hcCccEEEEcCCch---
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG-TYVESMAGDASNKKFLKTA-LRGVRSIICPSEGF--- 174 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~-~~v~~v~~D~~d~~~l~~~-~~~~d~vi~~~~g~--- 174 (306)
|+|+|.|+ |.+|+.++++|.+.|++|+++.+++++...... .++.++.+|.+|++.++++ ++.+|+++.++...
T Consensus 1 M~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~~~~~vi~Gd~~~~~~l~~~~i~~a~~vv~~t~~d~~N 79 (132)
T d1lssa_ 1 MYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAVTGKEEVN 79 (132)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEECCSCHHHH
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCcceecCChhhhhhhhhhhhhhhccCcccchhhhhhcChhhhhhhcccCCcHHHH
Confidence 78999999 999999999999999999999999987543322 2678999999999999887 68899999875432
Q ss_pred --hhhcccccCCCEEEE
Q 021854 175 --ISNAGSLKGVQHVIL 189 (306)
Q Consensus 175 --~~~~a~~~gvkr~V~ 189 (306)
....++..+++++|-
T Consensus 80 ~~~~~~~k~~~~~~iI~ 96 (132)
T d1lssa_ 80 LMSSLLAKSYGINKTIA 96 (132)
T ss_dssp HHHHHHHHHTTCCCEEE
T ss_pred HHHHHHHHHcCCceEEE
Confidence 233456678887764
|
| >d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn bsu222 species: Bacillus subtilis [TaxId: 1423]
Probab=98.40 E-value=5.3e-07 Score=69.95 Aligned_cols=91 Identities=9% Similarity=0.047 Sum_probs=72.0
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHH-hcCccEEEEcCCch----
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA-LRGVRSIICPSEGF---- 174 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~-~~~~d~vi~~~~g~---- 174 (306)
|+++|.|+ |.+|+.++++|.+.|++|+++..+++............+.+|.++++.++++ ++.+|.+|.+.+..
T Consensus 1 k~~iIiG~-G~~G~~la~~L~~~g~~vvvid~d~~~~~~~~~~~~~~~~gd~~~~~~l~~a~i~~a~~vi~~~~~~~~~~ 79 (134)
T d2hmva1 1 KQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYASYATHAVIANATEENELLSLGIRNFEYVIVAIGANIQAS 79 (134)
T ss_dssp CCEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHHTTTTCSEEEECCTTCTTHHHHHTGGGCSEEEECCCSCHHHH
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCeEEEecCcHHHHHHHHHhCCcceeeecccchhhhccCCccccEEEEEcCchHHhH
Confidence 57889988 9999999999999999999999999887665555678889999999999887 78899998874432
Q ss_pred --hhhcccccCCCEEEEec
Q 021854 175 --ISNAGSLKGVQHVILLS 191 (306)
Q Consensus 175 --~~~~a~~~gvkr~V~iS 191 (306)
.....+..+..+++--.
T Consensus 80 ~~~~~~~~~~~~~~iiar~ 98 (134)
T d2hmva1 80 TLTTLLLKELDIPNIWVKA 98 (134)
T ss_dssp HHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHHcCCCcEEeec
Confidence 12234556777766443
|
| >d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Saccharopine reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=98.07 E-value=8e-06 Score=65.32 Aligned_cols=74 Identities=9% Similarity=0.044 Sum_probs=59.9
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcC--CCceeeeccCCCHHHHHHHhcCccEEEEcCCc
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG--TYVESMAGDASNKKFLKTALRGVRSIICPSEG 173 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~--~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~g 173 (306)
.|+|+|.|| |.+|+.+++.|.+.|++|+++.|+.+++.+... ........+..+.......+...|.++.+.+.
T Consensus 2 ~K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~i~~~~~ 77 (182)
T d1e5qa1 2 TKSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVAKHDLVISLIPY 77 (182)
T ss_dssp CCEEEEECC-STTHHHHHHHHHTTTCEEEEEESCHHHHHHHHTTCTTEEEEECCTTCHHHHHHHHTTSSEEEECSCG
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECChHHHHHHHhcccccccccccccchhhhHhhhhccceeEeeccc
Confidence 689999998 999999999999999999999999998665432 23444556667777888888888999887543
|
| >d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO) species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=97.89 E-value=5.3e-06 Score=66.83 Aligned_cols=38 Identities=18% Similarity=0.204 Sum_probs=35.3
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhh
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM 137 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~ 137 (306)
|||.|+||+|.+|+++++.|++.||+|++..|+++++.
T Consensus 1 Mki~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~~~ 38 (212)
T d1jaya_ 1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAE 38 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHH
T ss_pred CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHHHH
Confidence 68999999999999999999999999999999998744
|
| >d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Thermus thermophilus [TaxId: 274]
Probab=97.77 E-value=3e-05 Score=62.49 Aligned_cols=93 Identities=10% Similarity=0.062 Sum_probs=61.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcCCchhhh
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEGFISN 177 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~g~~~~ 177 (306)
++++|+|+||+|.+|...++.+...|++|+++++++++.+....-+.+.+ .|..+........+++|+||-+.+..+.+
T Consensus 27 ~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~~~~~lGa~~~-i~~~~~~~~~~~~~g~D~v~d~~G~~~~~ 105 (171)
T d1iz0a2 27 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLALGAEEA-ATYAEVPERAKAWGGLDLVLEVRGKEVEE 105 (171)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHHTTCSEE-EEGGGHHHHHHHTTSEEEEEECSCTTHHH
T ss_pred CCCEEEEEeccccchhhhhhhhccccccccccccccccccccccccccee-eehhhhhhhhhccccccccccccchhHHH
Confidence 57999999999999999998888899999999998876443222223322 25555443344567899999875544332
Q ss_pred c---ccccCCCEEEEecCc
Q 021854 178 A---GSLKGVQHVILLSQL 193 (306)
Q Consensus 178 ~---a~~~gvkr~V~iSS~ 193 (306)
. .+.. .++|+++..
T Consensus 106 ~~~~l~~~--G~~v~~G~~ 122 (171)
T d1iz0a2 106 SLGLLAHG--GRLVYIGAA 122 (171)
T ss_dssp HHTTEEEE--EEEEEC---
T ss_pred HHHHHhcC--CcEEEEeCC
Confidence 2 2222 478887643
|
| >d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=97.73 E-value=6.2e-05 Score=59.28 Aligned_cols=94 Identities=16% Similarity=0.080 Sum_probs=54.6
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCC----CeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcCCch
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKR----TRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEGF 174 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g----~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~g~ 174 (306)
+++|.|.||||.+|+++++.|+++. .+++++.++...........-.....+..+.+ .++++|++|++.+.-
T Consensus 1 MkkVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s~g~~~~~~~~~~~~~~~~~~~----~~~~~DivF~a~~~~ 76 (146)
T d1t4ba1 1 MQNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQAAPSFGGTTGTLQDAFDLE----ALKALDIIVTCQGGD 76 (146)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTSBCCGGGTCCCBCEETTCHH----HHHTCSEEEECSCHH
T ss_pred CcEEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeeccccccccccccCCceeeecccchh----hhhcCcEEEEecCch
Confidence 4689999999999999999888753 36666665543311110011112223334433 367999999986543
Q ss_pred ----hhhcccccCCCEEEEecCccccc
Q 021854 175 ----ISNAGSLKGVQHVILLSQLSVYR 197 (306)
Q Consensus 175 ----~~~~a~~~gvkr~V~iSS~~~~~ 197 (306)
......++|.+-+ .++..+.++
T Consensus 77 ~s~~~~~~~~~~g~~~~-VID~Ss~fR 102 (146)
T d1t4ba1 77 YTNEIYPKLRESGWQGY-WIDAASSLR 102 (146)
T ss_dssp HHHHHHHHHHHTTCCCE-EEECSSTTT
T ss_pred HHHHhhHHHHhcCCCee-cccCCcccc
Confidence 3333445665533 344444454
|
| >d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase species: Arthrobacter, strain 1c [TaxId: 1663]
Probab=97.66 E-value=5.9e-05 Score=60.60 Aligned_cols=74 Identities=15% Similarity=0.046 Sum_probs=52.3
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhc--------CCCceeeeccCCCHHHHHHHhcCccEEEEc
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF--------GTYVESMAGDASNKKFLKTALRGVRSIICP 170 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~--------~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~ 170 (306)
.|+|.|.|| |.+|..++..|+++|++|.++.|++++.+... .+..+..........++.++++++|+||.+
T Consensus 1 sk~iaIiGa-G~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~aD~iii~ 79 (184)
T d1bg6a2 1 SKTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDADVILIV 79 (184)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTTCSEEEEC
T ss_pred CCEEEEECc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCCchhhhhhhhhhhhhhhhhhhHhHhcCCCEEEEE
Confidence 489999999 99999999999999999999999987643221 111111111111123466788999999998
Q ss_pred CCc
Q 021854 171 SEG 173 (306)
Q Consensus 171 ~~g 173 (306)
.+.
T Consensus 80 v~~ 82 (184)
T d1bg6a2 80 VPA 82 (184)
T ss_dssp SCG
T ss_pred Ech
Confidence 543
|
| >d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Rck domain from putative potassium channel Kch species: Escherichia coli [TaxId: 562]
Probab=97.66 E-value=0.00014 Score=57.15 Aligned_cols=73 Identities=21% Similarity=0.345 Sum_probs=60.8
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcch----hhhhcCCCceeeeccCCCHHHHHHH-hcCccEEEEcCC
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN----AMESFGTYVESMAGDASNKKFLKTA-LRGVRSIICPSE 172 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~----~~~~~~~~v~~v~~D~~d~~~l~~~-~~~~d~vi~~~~ 172 (306)
...|+|.|. |.+|+.++++|.+.|++|+++..++++ .......++.++.+|.+|++.++++ ++.++++|.+++
T Consensus 3 knHiII~G~-g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~~~vi~Gd~~d~~~L~~a~i~~a~~vi~~~~ 80 (153)
T d1id1a_ 3 KDHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILALSD 80 (153)
T ss_dssp CSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEEECSS
T ss_pred CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHhhcCCcEEEEccCcchHHHHHhccccCCEEEEccc
Confidence 357999999 899999999999999999999988864 3334456899999999999998765 577899998754
|
| >d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative enoyl reductase domain of polyketide synthase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=97.60 E-value=7.1e-05 Score=60.37 Aligned_cols=95 Identities=16% Similarity=0.109 Sum_probs=63.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCH---HHHHHHh--cCccEEEEcCC
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNK---KFLKTAL--RGVRSIICPSE 172 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~---~~l~~~~--~~~d~vi~~~~ 172 (306)
++++|||+||+|.+|...++.+...|++|+++++++++.+.....+...+ .|..+. +.+.+.. +++|++|.+.+
T Consensus 25 ~g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~~~l~~~Ga~~v-i~~~~~~~~~~v~~~t~~~g~d~v~d~~g 103 (183)
T d1pqwa_ 25 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSRLGVEYV-GDSRSVDFADEILELTDGYGVDVVLNSLA 103 (183)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHTTCCSEE-EETTCSTHHHHHHHHTTTCCEEEEEECCC
T ss_pred CCCEEEEECCCCCcccccchhhccccccceeeeccccccccccccccccc-ccCCccCHHHHHHHHhCCCCEEEEEeccc
Confidence 46899999999999999999888899999999998877443322233332 344443 3444444 46899998865
Q ss_pred chhh----hcccccCCCEEEEecCccc
Q 021854 173 GFIS----NAGSLKGVQHVILLSQLSV 195 (306)
Q Consensus 173 g~~~----~~a~~~gvkr~V~iSS~~~ 195 (306)
+... +.++.. .++|.++....
T Consensus 104 ~~~~~~~~~~l~~~--G~~v~~G~~~~ 128 (183)
T d1pqwa_ 104 GEAIQRGVQILAPG--GRFIELGKKDV 128 (183)
T ss_dssp THHHHHHHHTEEEE--EEEEECSCGGG
T ss_pred chHHHHHHHHhcCC--CEEEEEccCCC
Confidence 4422 223333 47888765444
|
| >d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase species: Guinea pig (Cavia porcellus) [TaxId: 10141]
Probab=97.56 E-value=0.00019 Score=58.05 Aligned_cols=98 Identities=11% Similarity=0.053 Sum_probs=63.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceee--eccCCCHHHHHHHh--cCccEEEEcCCc
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESM--AGDASNKKFLKTAL--RGVRSIICPSEG 173 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v--~~D~~d~~~l~~~~--~~~d~vi~~~~g 173 (306)
++++|+|+||+|++|...++-....|++|++++|++++.+.....+...+ .-|-...+.+.+.. +++|+||.+.++
T Consensus 29 ~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~Ga~~vi~~~~~~~~~~~~~~~~~~Gvd~v~D~vG~ 108 (182)
T d1v3va2 29 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQIGFDAAFNYKTVNSLEEALKKASPDGYDCYFDNVGG 108 (182)
T ss_dssp SSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTSCSCHHHHHHHHCTTCEEEEEESSCH
T ss_pred CCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHHHHHHHhhhhhhhcccccccHHHHHHHHhhcCCCceeEEecCc
Confidence 57999999999999999998888899999999999877433222222222 22222334444443 468999988654
Q ss_pred hh----hhcccccCCCEEEEecCccccc
Q 021854 174 FI----SNAGSLKGVQHVILLSQLSVYR 197 (306)
Q Consensus 174 ~~----~~~a~~~gvkr~V~iSS~~~~~ 197 (306)
.. .+.+... .+++.+.....+.
T Consensus 109 ~~~~~~~~~l~~~--G~~v~~G~~~~~~ 134 (182)
T d1v3va2 109 EFLNTVLSQMKDF--GKIAICGAISVYN 134 (182)
T ss_dssp HHHHHHGGGEEEE--EEEEECCCGGGTT
T ss_pred hhhhhhhhhccCC--CeEEeecceeecc
Confidence 42 2233333 4687776655443
|
| >d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Vibrio cholerae [TaxId: 666]
Probab=97.54 E-value=0.00023 Score=55.92 Aligned_cols=88 Identities=17% Similarity=0.148 Sum_probs=51.5
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCC----CeEEEEecCcch--hhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcCCc
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVKR----TRIKALVKDKRN--AMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG 173 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~g----~~V~~l~R~~~~--~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~g 173 (306)
|+|.|.||||++|+++++.|+++. .++..++.+... ... +... .....+..+. ..++++|++|.+.+.
T Consensus 1 mKVaIiGATGyvG~eLi~lLl~~~~~p~~~i~~~ss~~~~gk~~~-~~~~-~~~~~~~~~~----~~~~~~DvvF~alp~ 74 (147)
T d1mb4a1 1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQIGVPAPN-FGKD-AGMLHDAFDI----ESLKQLDAVITCQGG 74 (147)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSCCSSBCCC-SSSC-CCBCEETTCH----HHHTTCSEEEECSCH
T ss_pred CEEEEECCccHHHHHHHHHHHhcCCCCceEEEEeccccccccccc-cCCc-ceeeecccch----hhhccccEEEEecCc
Confidence 689999999999999999888644 355555433321 111 1111 1112223343 346889999999654
Q ss_pred h----hhhcccccCCC-EEEEecCc
Q 021854 174 F----ISNAGSLKGVQ-HVILLSQL 193 (306)
Q Consensus 174 ~----~~~~a~~~gvk-r~V~iSS~ 193 (306)
- +.....+.|.+ .+|=.|+.
T Consensus 75 ~~s~~~~~~l~~~g~~~~VIDlSsd 99 (147)
T d1mb4a1 75 SYTEKVYPALRQAGWKGYWIDAAST 99 (147)
T ss_dssp HHHHHHHHHHHHTTCCSEEEESSST
T ss_pred hHHHHHhHHHHHcCCceEEEeCCcc
Confidence 3 33444556765 34444554
|
| >d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamyl tRNA-reductase middle domain species: Archaeon Methanopyrus kandleri [TaxId: 2320]
Probab=97.51 E-value=7.3e-05 Score=59.63 Aligned_cols=70 Identities=17% Similarity=0.148 Sum_probs=54.1
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEecCcchhhhhcCC-CceeeeccCCCHHHHHHHhcCccEEEEcCC
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGT-YVESMAGDASNKKFLKTALRGVRSIICPSE 172 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~l~R~~~~~~~~~~~-~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~ 172 (306)
...++|||.|+ |.+|+.+++.|...|+ ++.+..|+.+++.+.... +.++ .+.+++.+.+..+|+||.+++
T Consensus 22 l~~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~~~~~-----~~~~~~~~~l~~~Divi~ats 93 (159)
T d1gpja2 22 LHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGEA-----VRFDELVDHLARSDVVVSATA 93 (159)
T ss_dssp CTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCEE-----CCGGGHHHHHHTCSEEEECCS
T ss_pred cccCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhhhccc-----ccchhHHHHhccCCEEEEecC
Confidence 35799999998 9999999999999997 699999998875543221 1222 234577788999999999843
|
| >d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Ketopantoate reductase PanE species: Escherichia coli [TaxId: 562]
Probab=97.47 E-value=1.9e-05 Score=62.66 Aligned_cols=70 Identities=10% Similarity=0.060 Sum_probs=48.3
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhc--CCCc--eeeeccCCCHHHHHHHhcCccEEEEcCCch
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF--GTYV--ESMAGDASNKKFLKTALRGVRSIICPSEGF 174 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~--~~~v--~~v~~D~~d~~~l~~~~~~~d~vi~~~~g~ 174 (306)
|+|+|.|+ |.+|..++..|++.|++|.++.|++++..... ..+. ........+. ..+..+|+||++...+
T Consensus 1 MkI~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~D~iii~vka~ 74 (167)
T d1ks9a2 1 MKITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQPYCSVNLVETDGSIFNESLTANDP----DFLATSDLLLVTLKAW 74 (167)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCSEEEEEEECTTSCEEEEEEEESCH----HHHHTCSEEEECSCGG
T ss_pred CEEEEECc-CHHHHHHHHHHHHCCCceEEEEcCHHHhhhhccccCCccccccccccchh----hhhcccceEEEeeccc
Confidence 78999999 99999999999999999999999987633211 1111 1111111232 3456899999985443
|
| >d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.46 E-value=0.00015 Score=58.14 Aligned_cols=92 Identities=14% Similarity=0.083 Sum_probs=60.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHH---HHHHHh--cCccEEEEcCC
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKK---FLKTAL--RGVRSIICPSE 172 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~---~l~~~~--~~~d~vi~~~~ 172 (306)
++.+|||+||+|.+|...++.+...|++|+++++++++.+....-+...+ .|..+.+ .+.+.. +++|++|.+.+
T Consensus 28 ~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~~~~~~~Ga~~v-i~~~~~~~~~~i~~~t~~~g~d~v~d~~g 106 (174)
T d1yb5a2 28 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQNGAHEV-FNHREVNYIDKIKKYVGEKGIDIIIEMLA 106 (174)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEE-EETTSTTHHHHHHHHHCTTCEEEEEESCH
T ss_pred CCCEEEEEeccccccccccccccccCcccccccccccccccccccCcccc-cccccccHHHHhhhhhccCCceEEeeccc
Confidence 47899999999999999999888899999999998876432211122222 3555533 333333 35799998755
Q ss_pred chhh----hcccccCCCEEEEecC
Q 021854 173 GFIS----NAGSLKGVQHVILLSQ 192 (306)
Q Consensus 173 g~~~----~~a~~~gvkr~V~iSS 192 (306)
+... +.++.. .++|.++.
T Consensus 107 ~~~~~~~~~~l~~~--G~iv~~G~ 128 (174)
T d1yb5a2 107 NVNLSKDLSLLSHG--GRVIVVGS 128 (174)
T ss_dssp HHHHHHHHHHEEEE--EEEEECCC
T ss_pred HHHHHHHHhccCCC--CEEEEEec
Confidence 4322 222333 57888754
|
| >d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Escherichia coli [TaxId: 562]
Probab=97.44 E-value=0.00012 Score=58.87 Aligned_cols=95 Identities=9% Similarity=0.012 Sum_probs=61.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCH---HHHHHHhc--CccEEEEcCC
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNK---KFLKTALR--GVRSIICPSE 172 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~---~~l~~~~~--~~d~vi~~~~ 172 (306)
++++|+|+||+|.+|...++-+...|++|+++++++++.+....-+.+.+ .|..+. +.+.++-. ++|+++.+.+
T Consensus 28 ~g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~~~~lGa~~v-i~~~~~d~~~~v~~~t~g~g~d~v~d~~g 106 (179)
T d1qora2 28 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALKAGAWQV-INYREEDLVERLKEITGGKKVRVVYDSVG 106 (179)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTCSEE-EETTTSCHHHHHHHHTTTCCEEEEEECSC
T ss_pred CCCEEEEEccccccchHHHHHHHHhCCeEeecccchHHHHHHHhcCCeEE-EECCCCCHHHHHHHHhCCCCeEEEEeCcc
Confidence 47899999999999999999888899999999999987432221122222 355553 34444443 4699998754
Q ss_pred chhh----hcccccCCCEEEEecCccc
Q 021854 173 GFIS----NAGSLKGVQHVILLSQLSV 195 (306)
Q Consensus 173 g~~~----~~a~~~gvkr~V~iSS~~~ 195 (306)
+... +..... .+++.++....
T Consensus 107 ~~~~~~~~~~l~~~--G~~v~~g~~~~ 131 (179)
T d1qora2 107 RDTWERSLDCLQRR--GLMVSFGNSSG 131 (179)
T ss_dssp GGGHHHHHHTEEEE--EEEEECCCTTC
T ss_pred HHHHHHHHHHHhcC--CeeeecccccC
Confidence 4322 222333 36777665543
|
| >d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: B. subtilis YhfP homologue species: Bacillus stearothermophilus [TaxId: 1422]
Probab=97.42 E-value=0.00011 Score=59.49 Aligned_cols=99 Identities=13% Similarity=0.039 Sum_probs=59.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCH-HHHHHHh--cCccEEEEcCCch
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNK-KFLKTAL--RGVRSIICPSEGF 174 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~-~~l~~~~--~~~d~vi~~~~g~ 174 (306)
.+.+|||+||+|++|...++-....|.+|++.++++++.+....-+.+.+ .|..+. +...... +++|+||-+.++.
T Consensus 31 ~g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~~~~~lGa~~v-i~~~~~~~~~~~~~~~~gvD~vid~vgg~ 109 (176)
T d1xa0a2 31 ERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRVLGAKEV-LAREDVMAERIRPLDKQRWAAAVDPVGGR 109 (176)
T ss_dssp GGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHHTTCSEE-EECC---------CCSCCEEEEEECSTTT
T ss_pred CCCEEEEEeccchHHHHHHHHHHHcCCceEEecCchHHHHHHHhccccee-eecchhHHHHHHHhhccCcCEEEEcCCch
Confidence 36899999999999999998888899999999999887432221122222 133321 1222222 3689999874433
Q ss_pred -hhhccc-ccCCCEEEEecCccccc
Q 021854 175 -ISNAGS-LKGVQHVILLSQLSVYR 197 (306)
Q Consensus 175 -~~~~a~-~~gvkr~V~iSS~~~~~ 197 (306)
+..... -..-.|+|.++......
T Consensus 110 ~~~~~l~~l~~~Griv~~G~~~g~~ 134 (176)
T d1xa0a2 110 TLATVLSRMRYGGAVAVSGLTGGAE 134 (176)
T ss_dssp THHHHHHTEEEEEEEEECSCCSSSC
T ss_pred hHHHHHHHhCCCceEEEeecccCcc
Confidence 322211 12235888887765544
|
| >d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Putative shikimate dehydrogenase YdiB species: Escherichia coli [TaxId: 562]
Probab=97.38 E-value=0.00041 Score=56.11 Aligned_cols=75 Identities=8% Similarity=0.037 Sum_probs=59.6
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEecCcchhhh------hcC--CCceeeeccCCCHHHHHHHhcCccEE
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAME------SFG--TYVESMAGDASNKKFLKTALRGVRSI 167 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~l~R~~~~~~~------~~~--~~v~~v~~D~~d~~~l~~~~~~~d~v 167 (306)
..+++|+|.|+ |+.|++++..|...|. ++++..|+.++... .+. ........|+.+.+.+...+..+|.|
T Consensus 16 l~~k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dii 94 (182)
T d1vi2a1 16 IKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALASADIL 94 (182)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHTCSEE
T ss_pred cCCCEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhcCcceEeeecccccchhhhhccccee
Confidence 35799999999 8899999999999996 78889998765321 111 13445678899999999999999999
Q ss_pred EEcCC
Q 021854 168 ICPSE 172 (306)
Q Consensus 168 i~~~~ 172 (306)
|++++
T Consensus 95 IN~Tp 99 (182)
T d1vi2a1 95 TNGTK 99 (182)
T ss_dssp EECSS
T ss_pred ccccC
Confidence 99843
|
| >d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC species: Thermotoga maritima [TaxId: 2336]
Probab=97.31 E-value=0.00056 Score=55.23 Aligned_cols=92 Identities=11% Similarity=-0.017 Sum_probs=52.2
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCC-CeEEEEecCcch---hhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcCC-c
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRN---AMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE-G 173 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~l~R~~~~---~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~-g 173 (306)
+.+|.|.||||++|+++++.|.++- .++..+..+... ..+..+....-......+.+ ...+++|++|.+.+ +
T Consensus 1 MikVaIvGATGyvG~eLirlL~~HP~~ei~~l~s~~~aG~~i~~~~p~~~~~~~~~~~~~~---~~~~~~dvvf~a~p~~ 77 (176)
T d1vkna1 1 MIRAGIIGATGYTGLELVRLLKNHPEAKITYLSSRTYAGKKLEEIFPSTLENSILSEFDPE---KVSKNCDVLFTALPAG 77 (176)
T ss_dssp CEEEEEESTTSHHHHHHHHHHHHCTTEEEEEEECSTTTTSBHHHHCGGGCCCCBCBCCCHH---HHHHHCSEEEECCSTT
T ss_pred CeEEEEECCCcHHHHHHHHHHHhCCCceEEEeeccccCCCcccccCchhhccccccccCHh---HhccccceEEEccccH
Confidence 4689999999999999999998764 466666433221 22222211111122223443 34457999999844 3
Q ss_pred hhhhcccccCCCEEEEecCc
Q 021854 174 FISNAGSLKGVQHVILLSQL 193 (306)
Q Consensus 174 ~~~~~a~~~gvkr~V~iSS~ 193 (306)
...+.+.+..-.++|=.|+.
T Consensus 78 ~s~~~~~~~~~~~VIDlSad 97 (176)
T d1vkna1 78 ASYDLVRELKGVKIIDLGAD 97 (176)
T ss_dssp HHHHHHTTCCSCEEEESSST
T ss_pred HHHHHHHhhccceEEecCcc
Confidence 33333333322356666664
|
| >d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=97.30 E-value=0.0002 Score=56.78 Aligned_cols=66 Identities=12% Similarity=0.089 Sum_probs=47.7
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcCC
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE 172 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~ 172 (306)
|+|.|.|+ |.+|..+++.|.+.|++|.+..|+++..+.....++.-...| + .++++++|+||.+.+
T Consensus 1 MkI~iIG~-G~mG~~lA~~l~~~g~~V~~~d~~~~~~~~a~~~~~~~~~~~--~----~~~~~~~DiIilavp 66 (165)
T d2f1ka2 1 MKIGVVGL-GLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDEAGQ--D----LSLLQTAKIIFLCTP 66 (165)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSCSEEES--C----GGGGTTCSEEEECSC
T ss_pred CEEEEEee-cHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHhhccceeee--e----cccccccccccccCc
Confidence 68999988 999999999999999999999999876543222221111111 1 135789999998855
|
| >d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=97.28 E-value=0.00014 Score=50.81 Aligned_cols=39 Identities=13% Similarity=0.187 Sum_probs=35.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchh
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA 136 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~ 136 (306)
++++|+|+||+|++|...++.+...|++|+++++++++.
T Consensus 31 ~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k~ 69 (77)
T d1o8ca2 31 QDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTH 69 (77)
T ss_dssp GGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGH
T ss_pred CCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHHH
Confidence 468999999999999999998888999999999998774
|
| >d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD species: Escherichia coli [TaxId: 562]
Probab=97.22 E-value=0.00048 Score=49.39 Aligned_cols=83 Identities=11% Similarity=0.099 Sum_probs=56.9
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcch-hhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcCC---
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-AMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE--- 172 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~-~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~--- 172 (306)
..+|+|+|.|. |..|..+++.|.++|++|++..++... ..+.....+.+...... . ..+.++|.||...+
T Consensus 3 ~~~K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~~~~~~~~~~~~~~~~~~~~~~~-~----~~~~~~d~vi~SPGi~~ 76 (93)
T d2jfga1 3 YQGKNVVIIGL-GLTGLSCVDFFLARGVTPRVMDTRMTPPGLDKLPEAVERHTGSLN-D----EWLMAADLIVASPGIAL 76 (93)
T ss_dssp CTTCCEEEECC-SHHHHHHHHHHHHTTCCCEEEESSSSCTTGGGSCTTSCEEESBCC-H----HHHHHCSEEEECTTSCT
T ss_pred cCCCEEEEEeE-CHHHHHHHHHHHHCCCEEEEeeCCcCchhHHHHhhccceeecccc-h----hhhccCCEEEECCCCCC
Confidence 35799999999 889999999999999999999876643 22333445555555542 2 23567899998521
Q ss_pred -chhhhcccccCCC
Q 021854 173 -GFISNAGSLKGVQ 185 (306)
Q Consensus 173 -g~~~~~a~~~gvk 185 (306)
......+++.|++
T Consensus 77 ~~~~~~~a~~~gi~ 90 (93)
T d2jfga1 77 AHPSLSAAADAGIE 90 (93)
T ss_dssp TSHHHHHHHHTTCE
T ss_pred CCHHHHHHHHcCCC
Confidence 2245556666654
|
| >d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Siroheme synthase N-terminal domain-like domain: Siroheme synthase CysG, domain 1 species: Salmonella typhimurium [TaxId: 90371]
Probab=97.20 E-value=0.0015 Score=48.34 Aligned_cols=90 Identities=12% Similarity=0.098 Sum_probs=64.5
Q ss_pred CccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhh-hhcC-CCceeeeccCCCHHHHHHHhcCccEEEEcCC
Q 021854 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM-ESFG-TYVESMAGDASNKKFLKTALRGVRSIICPSE 172 (306)
Q Consensus 95 ~~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~-~~~~-~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~ 172 (306)
.+..+++|+|.|+ |.+|..-++.|++.|++|+++....+... .... .+++++..++.+ ..+.+++.|+.++.
T Consensus 8 l~l~~k~vlVvG~-G~va~~ka~~ll~~ga~v~v~~~~~~~~~~~~~~~~~i~~~~~~~~~-----~dl~~~~lv~~at~ 81 (113)
T d1pjqa1 8 CQLRDRDCLIVGG-GDVAERKARLLLEAGARLTVNALTFIPQFTVWANEGMLTLVEGPFDE-----TLLDSCWLAIAATD 81 (113)
T ss_dssp ECCBTCEEEEECC-SHHHHHHHHHHHHTTBEEEEEESSCCHHHHHHHTTTSCEEEESSCCG-----GGGTTCSEEEECCS
T ss_pred EEeCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeccCChHHHHHHhcCCceeeccCCCH-----HHhCCCcEEeecCC
Confidence 3456899999999 99999999999999999999987775522 2222 367777777654 23678899998754
Q ss_pred ch-----hhhcccccCCCEEEEecC
Q 021854 173 GF-----ISNAGSLKGVQHVILLSQ 192 (306)
Q Consensus 173 g~-----~~~~a~~~gvkr~V~iSS 192 (306)
.. +...|++.|+ +|++..
T Consensus 82 d~~~n~~i~~~a~~~~i--lVNv~D 104 (113)
T d1pjqa1 82 DDTVNQRVSDAAESRRI--FCNVVD 104 (113)
T ss_dssp CHHHHHHHHHHHHHTTC--EEEETT
T ss_pred CHHHHHHHHHHHHHcCC--EEEeCC
Confidence 33 3445555654 666543
|
| >d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Glycinamide ribonucleotide transformylase PurT, N-domain species: Escherichia coli [TaxId: 562]
Probab=97.19 E-value=0.0013 Score=48.82 Aligned_cols=70 Identities=11% Similarity=0.092 Sum_probs=56.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhc--CccEEEEc
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--GVRSIICP 170 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~--~~d~vi~~ 170 (306)
...+|.|.|| |.+|+.++....+.|++++++..+++.-..... -+++.+|+.|.+.+.+... .+|+|-.=
T Consensus 10 ~~~kigIlGg-GQL~rMla~aA~~lG~~v~v~d~~~~~PA~~va--~~~i~~~~~d~~~l~~~~~~~~~DviT~E 81 (111)
T d1kjqa2 10 AATRVMLLGS-GELGKEVAIECQRLGVEVIAVDRYADAPAMHVA--HRSHVINMLDGDALRRVVELEKPHYIVPE 81 (111)
T ss_dssp TCCEEEEESC-SHHHHHHHHHHHTTTCEEEEEESSTTCGGGGGS--SEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred CCCEEEEEeC-CHHHHHHHHHHHHCCCEEEEEcCCCCCchhhcC--CeEEECCCCCHHHHHHHHHhhCCceEEEE
Confidence 3578999997 999999999999999999999888765332222 3678899999999988764 56888654
|
| >d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=97.13 E-value=0.0007 Score=52.82 Aligned_cols=70 Identities=17% Similarity=0.168 Sum_probs=46.8
Q ss_pred eEEEEcCCChHHHHHHHHHHHCCC--eEEEEecCcchhhh--hcC-CCceeeeccCCCHHHHHHHhcCccEEEEcC
Q 021854 101 AVLVTDGDSDIGQMVILSLIVKRT--RIKALVKDKRNAME--SFG-TYVESMAGDASNKKFLKTALRGVRSIICPS 171 (306)
Q Consensus 101 ~ilVtGatG~iG~~l~~~L~~~g~--~V~~l~R~~~~~~~--~~~-~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~ 171 (306)
+|.|+||+|.+|+.++..|+.+|. +++++..++.+... ... ....... ......+..+.++++|+||.++
T Consensus 2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~a~Dl~~~~~~~~~~-~~~~~~~~~~~~~~aDivVita 76 (144)
T d1mlda1 2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETRATVK-GYLGPEQLPDCLKGCDVVVIPA 76 (144)
T ss_dssp EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHHHHTTSSSSCEEE-EEESGGGHHHHHTTCSEEEECC
T ss_pred eEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchhhHHHhhhhhhcCCC-eEEcCCChHHHhCCCCEEEECC
Confidence 799999999999999999988884 67777776654221 111 1111111 1123456677899999999873
|
| >d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Potassium channel-related protein MthK species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]
Probab=97.10 E-value=0.00041 Score=52.75 Aligned_cols=71 Identities=20% Similarity=0.267 Sum_probs=57.6
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHH-hcCccEEEEcCCc
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA-LRGVRSIICPSEG 173 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~-~~~~d~vi~~~~g 173 (306)
|.|+|.|. |.+|+++++.| ++++|+++..+++........++.++.+|.+|++.++++ ++.++.++.+++.
T Consensus 1 kHivI~G~-g~~g~~l~~~L--~~~~i~vi~~d~~~~~~~~~~~~~~i~Gd~~~~~~L~~a~i~~A~~vi~~~~~ 72 (129)
T d2fy8a1 1 RHVVICGW-SESTLECLREL--RGSEVFVLAEDENVRKKVLRSGANFVHGDPTRVSDLEKANVRGARAVIVNLES 72 (129)
T ss_dssp CCEEEESC-CHHHHHHHHTS--CGGGEEEEESCTTHHHHHHHTTCEEEESCTTSHHHHHHTTCTTCSEEEECCSS
T ss_pred CEEEEECC-CHHHHHHHHHH--cCCCCEEEEcchHHHHHHHhcCccccccccCCHHHHHHhhhhcCcEEEEeccc
Confidence 46889988 88999999998 467888888888776555556789999999999988775 5778999987543
|
| >d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: MJ0490, lactate/malate dehydrogenase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=97.08 E-value=0.0017 Score=50.66 Aligned_cols=69 Identities=10% Similarity=0.091 Sum_probs=46.6
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCC--CeEEEEecCcch--hh----h------hcCCCceeeeccCCCHHHHHHHhcCcc
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRN--AM----E------SFGTYVESMAGDASNKKFLKTALRGVR 165 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~g--~~V~~l~R~~~~--~~----~------~~~~~v~~v~~D~~d~~~l~~~~~~~d 165 (306)
|+|.|+||+|.+|+.++..|+.++ .++.++.+++.. ++ + ....++++...--.|+ +.++++|
T Consensus 1 MKV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~d~----~~l~~aD 76 (145)
T d1hyea1 1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDENL----RIIDESD 76 (145)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETTCG----GGGTTCS
T ss_pred CEEEEECCCChHHHHHHHHHHhCCcccccccccchhhhHhhhcccccchhcccccccCCccccCCcchH----HHhccce
Confidence 689999999999999999999888 488888876532 11 1 1122344333222232 3588999
Q ss_pred EEEEcCC
Q 021854 166 SIICPSE 172 (306)
Q Consensus 166 ~vi~~~~ 172 (306)
+||.+++
T Consensus 77 vVVitAG 83 (145)
T d1hyea1 77 VVIITSG 83 (145)
T ss_dssp EEEECCS
T ss_pred EEEEecc
Confidence 9998743
|
| >d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Escherichia coli [TaxId: 562]
Probab=97.06 E-value=0.0005 Score=54.92 Aligned_cols=70 Identities=14% Similarity=0.072 Sum_probs=49.5
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh---cCCCceeeeccCCCHHHHHHHhcCccEEEEcCC
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALRGVRSIICPSE 172 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~---~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~ 172 (306)
..+++|+|.|| |+.+++++..|.+.|.+|.++.|+.+++++. +.....+...++.+. ....+|.||++++
T Consensus 16 ~~~k~vlIlGa-GGaarai~~al~~~g~~i~I~nRt~~ka~~l~~~~~~~~~~~~~~~~~~-----~~~~~dliIN~Tp 88 (170)
T d1nyta1 16 RPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQALSMDEL-----EGHEFDLIINATS 88 (170)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSEEECCSGGG-----TTCCCSEEEECCS
T ss_pred CCCCEEEEECC-cHHHHHHHHHhcccceEEEeccchHHHHHHHHHHHhhcccccccccccc-----cccccceeecccc
Confidence 35799999999 8899999999999999999999999875433 222112222233221 1356899998843
|
| >d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YahK species: Escherichia coli [TaxId: 562]
Probab=97.05 E-value=0.00076 Score=53.52 Aligned_cols=92 Identities=14% Similarity=0.156 Sum_probs=62.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhh--hhcCCCceeeeccCCCHHHHHHHhcCccEEEEcCCc--
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM--ESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG-- 173 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~--~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~g-- 173 (306)
++++|+|.|+ |.+|...++.+...|++++++.++.++.+ ..++. .. ..|..+........+++|++|.+.++
T Consensus 30 ~G~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~~~~~~~~a~~lGa--d~-~i~~~~~~~~~~~~~~~D~vid~~g~~~ 105 (168)
T d1uufa2 30 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKALGA--DE-VVNSRNADEMAAHLKSFDFILNTVAAPH 105 (168)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTC--SE-EEETTCHHHHHTTTTCEEEEEECCSSCC
T ss_pred CCCEEEEecc-chHHHHHHHHhhcccccchhhccchhHHHHHhccCC--cE-EEECchhhHHHHhcCCCceeeeeeecch
Confidence 5799999997 99999999888889999999998887643 22332 22 34677777777777899999987432
Q ss_pred hhhhcccc-cCCCEEEEecCc
Q 021854 174 FISNAGSL-KGVQHVILLSQL 193 (306)
Q Consensus 174 ~~~~~a~~-~gvkr~V~iSS~ 193 (306)
.+...... ..-.++++++..
T Consensus 106 ~~~~~~~~l~~~G~iv~~G~~ 126 (168)
T d1uufa2 106 NLDDFTTLLKRDGTMTLVGAP 126 (168)
T ss_dssp CHHHHHTTEEEEEEEEECCCC
T ss_pred hHHHHHHHHhcCCEEEEeccC
Confidence 22222211 112467777543
|
| >d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Lactobacillus pentosus [TaxId: 1589]
Probab=97.00 E-value=0.0016 Score=50.79 Aligned_cols=66 Identities=9% Similarity=0.158 Sum_probs=48.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCC--CeEEEEecCcchhhh---------hcCCCceeeeccCCCHHHHHHHhcCccE
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRNAME---------SFGTYVESMAGDASNKKFLKTALRGVRS 166 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g--~~V~~l~R~~~~~~~---------~~~~~v~~v~~D~~d~~~l~~~~~~~d~ 166 (306)
++++|.|.|+ |.+|..++..|+.+| .+++++.++++++.. .+.....+...|+. .++++|+
T Consensus 4 ~~~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~~~d~~-------~~~~adi 75 (146)
T d1ez4a1 4 NHQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEYS-------DCKDADL 75 (146)
T ss_dssp TBCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCGG-------GGTTCSE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccccccCCceEeeccHH-------HhccccE
Confidence 4689999997 999999999999988 589999988865221 11223444555542 3789999
Q ss_pred EEEcC
Q 021854 167 IICPS 171 (306)
Q Consensus 167 vi~~~ 171 (306)
||.++
T Consensus 76 vvita 80 (146)
T d1ez4a1 76 VVITA 80 (146)
T ss_dssp EEECC
T ss_pred EEEec
Confidence 99873
|
| >d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Cinnamyl alcohol dehydrogenase, ADH6 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=96.97 E-value=0.00043 Score=55.09 Aligned_cols=70 Identities=13% Similarity=0.107 Sum_probs=49.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhh--hcCCCceeeeccCCCHHHHHHHhcCccEEEEc
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME--SFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~--~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~ 170 (306)
++.+|+|.|+ |.+|...++.+...|++|+++++++++.+. .++.. +++.. ..+.+..++..+++|+++.+
T Consensus 27 ~g~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~~~~k~~~a~~lGa~-~~i~~-~~~~~~~~~~~~~~d~vi~~ 98 (168)
T d1piwa2 27 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAMKMGAD-HYIAT-LEEGDWGEKYFDTFDLIVVC 98 (168)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCS-EEEEG-GGTSCHHHHSCSCEEEEEEC
T ss_pred CCCEEEEECC-CCcchhHHHHhhhccccccccccchhHHHHhhccCCc-EEeec-cchHHHHHhhhcccceEEEE
Confidence 4789999997 999999988777889999999999887442 23321 22211 12223445566788999976
|
| >d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Glycerol-3- phosphate dehydrogenase species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=96.97 E-value=0.0011 Score=53.34 Aligned_cols=74 Identities=8% Similarity=0.018 Sum_probs=51.4
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcch--hhhhcC----C--CceeeeccCCCHHHHHHHhcCccEEEEcC
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN--AMESFG----T--YVESMAGDASNKKFLKTALRGVRSIICPS 171 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~--~~~~~~----~--~v~~v~~D~~d~~~l~~~~~~~d~vi~~~ 171 (306)
|+|.|.|| |..|.+++..|++.|++|.+..|..+. ...... + .......++.-..+++++++++|+||.+.
T Consensus 1 MkI~ViGa-G~~GtalA~~la~~g~~V~l~~r~~~~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ad~Ii~av 79 (180)
T d1txga2 1 MIVSILGA-GAMGSALSVPLVDNGNEVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLENAEVVLLGV 79 (180)
T ss_dssp CEEEEESC-CHHHHHHHHHHHHHCCEEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHTTCSEEEECS
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCEEEEEEecccHHHHHHHhhhhhhhhhcchhccccccccccHHHHHhccchhhccc
Confidence 78999999 999999999999999999999986543 211110 0 11111112222466888999999999985
Q ss_pred Cch
Q 021854 172 EGF 174 (306)
Q Consensus 172 ~g~ 174 (306)
+..
T Consensus 80 ps~ 82 (180)
T d1txga2 80 STD 82 (180)
T ss_dssp CGG
T ss_pred chh
Confidence 543
|
| >d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Pyrroline-5-carboxylate reductase ProC species: Neisseria meningitidis, serogroup B [TaxId: 487]
Probab=96.93 E-value=0.0006 Score=53.36 Aligned_cols=64 Identities=16% Similarity=0.101 Sum_probs=46.6
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCC-CeEEEEecCcchhhhhcCC-CceeeeccCCCHHHHHHHhcCccEEEEcCC
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAMESFGT-YVESMAGDASNKKFLKTALRGVRSIICPSE 172 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~g-~~V~~l~R~~~~~~~~~~~-~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~ 172 (306)
|+|.+.|+ |.+|.++++.|++.| ++|.+..|++++.+..... ++... -|.. .+..+|+||.+..
T Consensus 1 MkI~fIG~-G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~~~~~~~-~~~~-------~v~~~Div~lavk 66 (152)
T d1yqga2 1 MNVYFLGG-GNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKELGVETS-ATLP-------ELHSDDVLILAVK 66 (152)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHTCCEEE-SSCC-------CCCTTSEEEECSC
T ss_pred CEEEEEcC-cHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhhhcccccc-cccc-------cccccceEEEecC
Confidence 68999988 999999999999888 8999999999875443221 33322 2222 1567899998843
|
| >d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Glycerol-3- phosphate dehydrogenase species: Trypanosome (Leishmania mexicana) [TaxId: 5665]
Probab=96.93 E-value=0.00014 Score=59.61 Aligned_cols=75 Identities=12% Similarity=0.035 Sum_probs=52.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhc--------CCCceeeeccCCCHHHHHHHhcCccEEEE
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF--------GTYVESMAGDASNKKFLKTALRGVRSIIC 169 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~--------~~~v~~v~~D~~d~~~l~~~~~~~d~vi~ 169 (306)
.+++|+|.|| |..|.+++..|++.|++|.+..|+++...... -++++. .-++.=..+++++++++|+||.
T Consensus 6 ~m~KI~ViGa-G~wGtAlA~~La~~g~~V~l~~r~~~~~~~i~~~~~n~~yl~~~~l-~~~i~~t~~l~~a~~~ad~iii 83 (189)
T d1n1ea2 6 YLNKAVVFGS-GAFGTALAMVLSKKCREVCVWHMNEEEVRLVNEKRENVLFLKGVQL-ASNITFTSDVEKAYNGAEIILF 83 (189)
T ss_dssp CEEEEEEECC-SHHHHHHHHHHHTTEEEEEEECSCHHHHHHHHHHTBCTTTSTTCBC-CTTEEEESCHHHHHTTCSCEEE
T ss_pred eeceEEEECC-CHHHHHHHHHHHHcCCeEEEEEecHHHHHHHhhccccccccccccc-ccccccchhhhhccCCCCEEEE
Confidence 3568999999 99999999999999999999999987643211 011211 1111112357788999999999
Q ss_pred cCCch
Q 021854 170 PSEGF 174 (306)
Q Consensus 170 ~~~g~ 174 (306)
+.+..
T Consensus 84 avPs~ 88 (189)
T d1n1ea2 84 VIPTQ 88 (189)
T ss_dssp CSCHH
T ss_pred cCcHH
Confidence 86643
|
| >d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Salmonella typhimurium [TaxId: 90371]
Probab=96.91 E-value=0.00046 Score=54.57 Aligned_cols=64 Identities=13% Similarity=0.012 Sum_probs=49.9
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcC
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS 171 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~ 171 (306)
|+|.|.|- |.+|+.+++.|++.||+|++..|++++.++........ . .+..++.+++|+||.+.
T Consensus 1 MkIgiIGl-G~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~----~---~~~~e~~~~~d~ii~~v 64 (161)
T d1vpda2 1 MKVGFIGL-GIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAET----A---STAKAIAEQCDVIITML 64 (161)
T ss_dssp CEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEE----C---SSHHHHHHHCSEEEECC
T ss_pred CEEEEEeh-hHHHHHHHHHHHHCCCeEEEEeCCcchhHHHHHhhhhh----c---ccHHHHHhCCCeEEEEc
Confidence 57999988 99999999999999999999999998866544333322 1 23456677899999883
|
| >d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhfP species: Bacillus subtilis [TaxId: 1423]
Probab=96.86 E-value=0.00018 Score=57.78 Aligned_cols=94 Identities=14% Similarity=0.073 Sum_probs=56.9
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHh-----cCccEEEEcCCc
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTAL-----RGVRSIICPSEG 173 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~-----~~~d~vi~~~~g 173 (306)
+.+|||+||+|++|...++-....|++|++.+++.++.+....-+.+.+ .|..+ ...+.. +++|.||.+.++
T Consensus 24 ~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~~~~~lGad~v-i~~~~--~~~~~~~~~~~~gvd~vid~vgg 100 (167)
T d1tt7a2 24 KGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQLGASEV-ISRED--VYDGTLKALSKQQWQGAVDPVGG 100 (167)
T ss_dssp GCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHHHHTCSEE-EEHHH--HCSSCCCSSCCCCEEEEEESCCT
T ss_pred CCEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHHHHHHhhcccce-Eeccc--hhchhhhcccCCCceEEEecCcH
Confidence 4679999999999999997777789999999999988543222122222 12211 111111 367999977554
Q ss_pred h-hhhcccc-cCCCEEEEecCccc
Q 021854 174 F-ISNAGSL-KGVQHVILLSQLSV 195 (306)
Q Consensus 174 ~-~~~~a~~-~gvkr~V~iSS~~~ 195 (306)
. +...... ..-.++|.+.....
T Consensus 101 ~~~~~~~~~l~~~G~iv~~G~~~g 124 (167)
T d1tt7a2 101 KQLASLLSKIQYGGSVAVSGLTGG 124 (167)
T ss_dssp HHHHHHHTTEEEEEEEEECCCSSC
T ss_pred HHHHHHHHHhccCceEEEeeccCC
Confidence 4 2222111 12246777765543
|
| >d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Conserved hypothetical protein MTH1747 species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]
Probab=96.85 E-value=0.00084 Score=52.41 Aligned_cols=65 Identities=8% Similarity=0.012 Sum_probs=47.5
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcCC
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE 172 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~ 172 (306)
|+|.|.|. |.+|+.+++.|+++|++|+...|+.++........+.+. + +..++++.+|+||.+.+
T Consensus 1 MkIgiIG~-G~mG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~--~-----~~~e~~~~~diIi~~v~ 65 (152)
T d1i36a2 1 LRVGFIGF-GEVAQTLASRLRSRGVEVVTSLEGRSPSTIERARTVGVT--E-----TSEEDVYSCPVVISAVT 65 (152)
T ss_dssp CEEEEESC-SHHHHHHHHHHHHTTCEEEECCTTCCHHHHHHHHHHTCE--E-----CCHHHHHTSSEEEECSC
T ss_pred CEEEEEcH-HHHHHHHHHHHHHCCCeEEEEcCchhHHHHHhhhccccc--c-----cHHHHHhhcCeEEEEec
Confidence 67999977 999999999999999999998887766433322222221 1 23457889999998844
|
| >d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Usg-1 protein homolog PA3116 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=96.84 E-value=0.0005 Score=53.66 Aligned_cols=87 Identities=15% Similarity=0.100 Sum_probs=49.6
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCC---CeEEEEecCcchhhh--hcCCCceeeeccCCCHHHHHHHhcCccEEEEcCCc
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKR---TRIKALVKDKRNAME--SFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG 173 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g---~~V~~l~R~~~~~~~--~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~g 173 (306)
.++|.|.||||++|+++++.|.+++ .++..+..+.+.-+. ...........+- ..+.++|++|.+.+.
T Consensus 2 ~mnVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s~~~~Gk~i~~~~~~~~~~~~~~-------~~~~~~d~vf~a~p~ 74 (144)
T d2hjsa1 2 PLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQRMGFAESSLRVGDVDS-------FDFSSVGLAFFAAAA 74 (144)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTCEEEETTEEEECEEGGG-------CCGGGCSEEEECSCH
T ss_pred CCEEEEECCCCHHHHHHHHHHHhcCCCceEEEEEeecccCCcceeeccccchhccchh-------hhhccceEEEecCCc
Confidence 4789999999999999999997655 366665443322110 0011111111111 225678999988554
Q ss_pred h----hhhcccccCCCEEEEecCc
Q 021854 174 F----ISNAGSLKGVQHVILLSQL 193 (306)
Q Consensus 174 ~----~~~~a~~~gvkr~V~iSS~ 193 (306)
- ......+.|. ++|-.|+.
T Consensus 75 ~~s~~~~~~~~~~g~-~VID~Ss~ 97 (144)
T d2hjsa1 75 EVSRAHAERARAAGC-SVIDLSGA 97 (144)
T ss_dssp HHHHHHHHHHHHTTC-EEEETTCT
T ss_pred chhhhhccccccCCc-eEEeechh
Confidence 3 2222334443 56655654
|
| >d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: GDP-mannose 6-dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=96.81 E-value=0.001 Score=54.57 Aligned_cols=70 Identities=7% Similarity=-0.093 Sum_probs=48.5
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccC-------------CCHHHHHHHhcCccE
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDA-------------SNKKFLKTALRGVRS 166 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~-------------~d~~~l~~~~~~~d~ 166 (306)
|+|.|.|+ |++|..++..|++.|++|+++..+.++....-.....+...++ .-..++.++++.+|+
T Consensus 1 MkI~ViGl-G~vGl~~a~~la~~g~~V~g~D~n~~~i~~ln~g~~p~~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~d~ 79 (202)
T d1mv8a2 1 MRISIFGL-GYVGAVCAGCLSARGHEVIGVDVSSTKIDLINQGKSPIVEPGLEALLQQGRQTGRLSGTTDFKKAVLDSDV 79 (202)
T ss_dssp CEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHHTCSE
T ss_pred CEEEEECC-CHhHHHHHHHHHhCCCcEEEEeCCHHHHHHhcccCCcccchhhhhhhhhhhcccccccCCCHHHHHhhCCE
Confidence 68999977 9999999999999999999999888765433221111111111 011234567788999
Q ss_pred EEEc
Q 021854 167 IICP 170 (306)
Q Consensus 167 vi~~ 170 (306)
++.+
T Consensus 80 i~i~ 83 (202)
T d1mv8a2 80 SFIC 83 (202)
T ss_dssp EEEC
T ss_pred EEEe
Confidence 9987
|
| >d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=96.77 E-value=0.00023 Score=57.64 Aligned_cols=95 Identities=8% Similarity=-0.052 Sum_probs=58.6
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhc--CccEEEEcCCchhh
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--GVRSIICPSEGFIS 176 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~--~~d~vi~~~~g~~~ 176 (306)
+.+|||+||+|++|...++.....|++|++++|++++.+.....+...+ .|..+.+. .+.+. ..|.+|.+.++...
T Consensus 32 ~~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~~~~~~lGad~v-i~~~~~~~-~~~l~~~~~~~vvD~Vgg~~~ 109 (177)
T d1o89a2 32 DGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYLKSLGASRV-LPRDEFAE-SRPLEKQVWAGAIDTVGDKVL 109 (177)
T ss_dssp GCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHHHTEEEE-EEGGGSSS-CCSSCCCCEEEEEESSCHHHH
T ss_pred CCcEEEEEccccchHHHHHHHHHcCCCeEEEecchhHHHHHHhhccccc-cccccHHH-HHHHHhhcCCeeEEEcchHHH
Confidence 4589999999999999998888899999999999988443222122322 12222111 12222 24888876554322
Q ss_pred ----hcccccCCCEEEEecCccccc
Q 021854 177 ----NAGSLKGVQHVILLSQLSVYR 197 (306)
Q Consensus 177 ----~~a~~~gvkr~V~iSS~~~~~ 197 (306)
+.+... .++|.++......
T Consensus 110 ~~~l~~l~~~--Griv~~G~~~~~~ 132 (177)
T d1o89a2 110 AKVLAQMNYG--GCVAACGLAGGFT 132 (177)
T ss_dssp HHHHHTEEEE--EEEEECCCTTCSC
T ss_pred HHHHHHhccc--cceEeecccCCcc
Confidence 222223 4788887665443
|
| >d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: CoaB-like family: CoaB-like domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) species: Escherichia coli [TaxId: 562]
Probab=96.76 E-value=0.0022 Score=53.56 Aligned_cols=71 Identities=7% Similarity=0.082 Sum_probs=50.3
Q ss_pred cCCCeEEEEcC----------------CChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCC--HHHHH
Q 021854 97 EARDAVLVTDG----------------DSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASN--KKFLK 158 (306)
Q Consensus 97 ~~~~~ilVtGa----------------tG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d--~~~l~ 158 (306)
..+++||||+| ||..|.+|++.+..+|++|+++.-.... ..+.++..+...-.+ .+.+.
T Consensus 4 l~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~V~li~g~~~~---~~p~~~~~~~~~t~~~m~~~~~ 80 (223)
T d1u7za_ 4 LKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSL---PTPPFVKRVDVMTALEMEAAVN 80 (223)
T ss_dssp TTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCC---CCCTTEEEEECCSHHHHHHHHH
T ss_pred cCCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCchhhhhccccc---CcccccccceehhhHHHHHHHH
Confidence 45788888875 7899999999999999999998776532 133456655433221 13344
Q ss_pred HHhcCccEEEEc
Q 021854 159 TALRGVRSIICP 170 (306)
Q Consensus 159 ~~~~~~d~vi~~ 170 (306)
..+..+|++|++
T Consensus 81 ~~~~~~D~~i~a 92 (223)
T d1u7za_ 81 ASVQQQNIFIGC 92 (223)
T ss_dssp HHGGGCSEEEEC
T ss_pred hhhccceeEeee
Confidence 556788999987
|
| >d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Haemophilus influenzae [TaxId: 727]
Probab=96.73 E-value=0.0012 Score=51.24 Aligned_cols=38 Identities=13% Similarity=0.203 Sum_probs=34.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcch
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN 135 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~ 135 (306)
..++|.|.|+.|.+|+.+++.|.+.||+|.+..|+...
T Consensus 8 ~~~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~~ 45 (152)
T d2pv7a2 8 DIHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWA 45 (152)
T ss_dssp TCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGG
T ss_pred CCCeEEEEcCCCHHHHHHHHHHHHcCCCcEeccccccc
Confidence 46899999999999999999999999999999887744
|
| >d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Pyrroline-5-carboxylate reductase ProC species: Streptococcus pyogenes [TaxId: 1314]
Probab=96.72 E-value=0.00072 Score=52.99 Aligned_cols=74 Identities=7% Similarity=-0.059 Sum_probs=51.9
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCC-CceeeeccCCCHHHHHHHhcCccEEEEcC-Cchhhh
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGT-YVESMAGDASNKKFLKTALRGVRSIICPS-EGFISN 177 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~-~v~~v~~D~~d~~~l~~~~~~~d~vi~~~-~g~~~~ 177 (306)
|+|.+.|+ |.+|+++++.|++.|+++++..|+.++.++.... ++.+. . +.+++++.+|+||.+. +....+
T Consensus 1 MkIg~IG~-G~mG~al~~~l~~~~~~i~v~~r~~~~~~~l~~~~g~~~~----~---~~~~~~~~~dvIilavkp~~~~~ 72 (152)
T d2ahra2 1 MKIGIIGV-GKMASAIIKGLKQTPHELIISGSSLERSKEIAEQLALPYA----M---SHQDLIDQVDLVILGIKPQLFET 72 (152)
T ss_dssp CEEEEECC-SHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHHTCCBC----S---SHHHHHHTCSEEEECSCGGGHHH
T ss_pred CEEEEEec-cHHHHHHHHHHHhCCCeEEEEcChHHhHHhhccccceeee----c---hhhhhhhccceeeeecchHhHHH
Confidence 67999988 9999999999999999999999998875433211 12211 2 3456677999999884 433333
Q ss_pred cccc
Q 021854 178 AGSL 181 (306)
Q Consensus 178 ~a~~ 181 (306)
....
T Consensus 73 vl~~ 76 (152)
T d2ahra2 73 VLKP 76 (152)
T ss_dssp HHTT
T ss_pred Hhhh
Confidence 3333
|
| >d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative zinc-binding alcohol dehydrogenase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.65 E-value=0.0004 Score=56.37 Aligned_cols=96 Identities=20% Similarity=0.195 Sum_probs=53.5
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEE-EecCcchhhh---hcCCCceeeeccCCC---HHHHHHHh-cCccEEEEc
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKA-LVKDKRNAME---SFGTYVESMAGDASN---KKFLKTAL-RGVRSIICP 170 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~-l~R~~~~~~~---~~~~~v~~v~~D~~d---~~~l~~~~-~~~d~vi~~ 170 (306)
+.+|||+||+|++|...++-....|.++++ .+++.++... ..+. . ...|..+ .+.++++. +++|+||-+
T Consensus 31 ~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~ga--d-~vi~~~~~~~~~~~~~~~~~GvDvv~D~ 107 (187)
T d1vj1a2 31 NQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSELGF--D-AAVNYKTGNVAEQLREACPGGVDVYFDN 107 (187)
T ss_dssp CCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHSCC--S-EEEETTSSCHHHHHHHHCTTCEEEEEES
T ss_pred CCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcccc--e-EEeeccchhHHHHHHHHhccCceEEEec
Confidence 479999999999999999877778986555 4555544322 2232 1 2334443 23333333 468999988
Q ss_pred CCchhhhc-ccc-cCCCEEEEecCccccc
Q 021854 171 SEGFISNA-GSL-KGVQHVILLSQLSVYR 197 (306)
Q Consensus 171 ~~g~~~~~-a~~-~gvkr~V~iSS~~~~~ 197 (306)
.++...+. +.. ..-.|+|.+...+.+.
T Consensus 108 vGg~~~~~~~~~l~~~G~iv~~G~~s~~~ 136 (187)
T d1vj1a2 108 VGGDISNTVISQMNENSHIILCGQISQYN 136 (187)
T ss_dssp SCHHHHHHHHTTEEEEEEEEEC-------
T ss_pred CCchhHHHHhhhccccccEEEeccccccc
Confidence 65542222 111 2234788876655543
|
| >d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein TM0436 species: Thermotoga maritima [TaxId: 2336]
Probab=96.64 E-value=0.0037 Score=49.95 Aligned_cols=90 Identities=9% Similarity=0.080 Sum_probs=55.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEecCcchhh--hhcCCCceeeeccCCCHHH----HHHHh--cCccEEE
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAM--ESFGTYVESMAGDASNKKF----LKTAL--RGVRSII 168 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~l~R~~~~~~--~~~~~~v~~v~~D~~d~~~----l~~~~--~~~d~vi 168 (306)
++.+|+|+|| |.+|...++.+...|+ +|+++.+++++.+ ..++.. .++...-.+... +.+.. .++|+||
T Consensus 28 ~G~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a~~lGa~-~vi~~~~~~~~~~~~~i~~~~~~~g~Dvvi 105 (182)
T d1vj0a2 28 AGKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGAD-LTLNRRETSVEERRKAIMDITHGRGADFIL 105 (182)
T ss_dssp BTCEEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHTTCS-EEEETTTSCHHHHHHHHHHHTTTSCEEEEE
T ss_pred CCCEEEEECC-Cccchhheecccccccccccccccccccccccccccce-EEEeccccchHHHHHHHHHhhCCCCceEEe
Confidence 4789999997 9999999999989997 7999999887743 223321 222222123222 22222 2589999
Q ss_pred EcCCc--hhh---hcccccCCCEEEEec
Q 021854 169 CPSEG--FIS---NAGSLKGVQHVILLS 191 (306)
Q Consensus 169 ~~~~g--~~~---~~a~~~gvkr~V~iS 191 (306)
.+.++ .+. +.++.. .++++++
T Consensus 106 d~vG~~~~~~~a~~~l~~~--G~iv~~G 131 (182)
T d1vj0a2 106 EATGDSRALLEGSELLRRG--GFYSVAG 131 (182)
T ss_dssp ECSSCTTHHHHHHHHEEEE--EEEEECC
T ss_pred ecCCchhHHHHHHHHhcCC--CEEEEEe
Confidence 87543 222 222222 4677775
|
| >d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]
Probab=96.62 E-value=0.0055 Score=48.13 Aligned_cols=93 Identities=15% Similarity=0.116 Sum_probs=58.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhh--hcCCCceeeeccC--CCHHHHHHHh-----cCccEEE
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME--SFGTYVESMAGDA--SNKKFLKTAL-----RGVRSII 168 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~--~~~~~v~~v~~D~--~d~~~l~~~~-----~~~d~vi 168 (306)
++.+|+|+| +|.+|...++.+...|.+|+++.+++++.+. .++.... +..|- .+...+.+.+ .++|+||
T Consensus 26 ~g~~vlV~G-~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~~~a~~~ga~~~-~~~~~~~~~~~~~~~~~~~~~g~g~D~vi 103 (170)
T d1e3ja2 26 LGTTVLVIG-AGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKNCGADVT-LVVDPAKEEESSIIERIRSAIGDLPNVTI 103 (170)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEE-EECCTTTSCHHHHHHHHHHHSSSCCSEEE
T ss_pred CCCEEEEEc-ccccchhhHhhHhhhcccccccchHHHHHHHHHHcCCcEE-EeccccccccchhhhhhhcccccCCceee
Confidence 468999998 5999999999888899999999999987432 2332222 22222 2333333332 3689999
Q ss_pred EcCCch--hhhcccc-cCCCEEEEecC
Q 021854 169 CPSEGF--ISNAGSL-KGVQHVILLSQ 192 (306)
Q Consensus 169 ~~~~g~--~~~~a~~-~gvkr~V~iSS 192 (306)
.++++. +..+.+. ..-.++++++.
T Consensus 104 d~~g~~~~~~~a~~~~~~~G~iv~~G~ 130 (170)
T d1e3ja2 104 DCSGNEKCITIGINITRTGGTLMLVGM 130 (170)
T ss_dssp ECSCCHHHHHHHHHHSCTTCEEEECSC
T ss_pred ecCCChHHHHHHHHHHhcCCceEEEec
Confidence 885542 2222211 22357888774
|
| >d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=96.57 E-value=0.0018 Score=51.03 Aligned_cols=64 Identities=8% Similarity=0.062 Sum_probs=48.9
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEc
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~ 170 (306)
+++|.|.|- |.+|+.+++.|+++||+|.+..|++++........... ..+..++++.+|+++.+
T Consensus 1 M~kIg~IGl-G~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~-------~~~~~e~~~~~diii~~ 64 (162)
T d3cuma2 1 MKQIAFIGL-GHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASA-------ARSARDAVQGADVVISM 64 (162)
T ss_dssp CCEEEEECC-STTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEE-------CSSHHHHHTSCSEEEEC
T ss_pred CCEEEEEEE-HHHHHHHHHHHHHCCCeEEEEECchhhhhhhhhhhccc-------cchhhhhccccCeeeec
Confidence 467999977 99999999999999999999999988755443322111 12345678889999877
|
| >d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC species: Salmonella typhimurium [TaxId: 90371]
Probab=96.46 E-value=0.00041 Score=55.99 Aligned_cols=32 Identities=16% Similarity=0.129 Sum_probs=27.0
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHC-CCeEEEEe
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVK-RTRIKALV 130 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~-g~~V~~l~ 130 (306)
+++|.|.||||++|+++++.|..+ .+++..+.
T Consensus 1 MikVaIiGATGyvG~eLlrlL~~HP~~ei~~l~ 33 (179)
T d2g17a1 1 MLNTLIVGASGYAGAELVSYVNRHPHMTITALT 33 (179)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHCTTEEEEEEE
T ss_pred CcEEEEECcccHHHHHHHHHHHhCCCCceEeeE
Confidence 478999999999999999999987 46776553
|
| >d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=96.46 E-value=0.0037 Score=48.65 Aligned_cols=65 Identities=15% Similarity=0.177 Sum_probs=45.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCC--eEEEEecCcchhhh----h------cCCCceeeeccCCCHHHHHHHhcCcc
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRT--RIKALVKDKRNAME----S------FGTYVESMAGDASNKKFLKTALRGVR 165 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~--~V~~l~R~~~~~~~----~------~~~~v~~v~~D~~d~~~l~~~~~~~d 165 (306)
.+++|.|+|| |.+|+.++..|+..+. ++.++.++++++.. . ....+.+...|+ +.++++|
T Consensus 5 ~~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~d~-------~~l~daD 76 (148)
T d1ldna1 5 GGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDY-------DDCRDAD 76 (148)
T ss_dssp TSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCG-------GGTTTCS
T ss_pred CCCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCccccCCCeEEEECCH-------HHhccce
Confidence 4689999997 9999999999999884 78888887765211 1 122334433443 3477889
Q ss_pred EEEEc
Q 021854 166 SIICP 170 (306)
Q Consensus 166 ~vi~~ 170 (306)
+||.+
T Consensus 77 vvvit 81 (148)
T d1ldna1 77 LVVIC 81 (148)
T ss_dssp EEEEC
T ss_pred eEEEe
Confidence 98876
|
| >d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Haemophilus influenzae [TaxId: 727]
Probab=96.43 E-value=0.0032 Score=50.22 Aligned_cols=67 Identities=16% Similarity=0.226 Sum_probs=49.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhh---cCC--CceeeeccCCCHHHHHHHhcCccEEEEcCC
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGT--YVESMAGDASNKKFLKTALRGVRSIICPSE 172 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~---~~~--~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~ 172 (306)
.+++|+|.|| |+.++.++..|.+.+.+|+++.|+.++++.. +.. ++.....|-. .+..+|.+|++++
T Consensus 17 ~~k~vlIlGa-GGaarai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~~~~~~~~~~~~~~-------~~~~~diiIN~tp 88 (171)
T d1p77a1 17 PNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQAVSMDSI-------PLQTYDLVINATS 88 (171)
T ss_dssp TTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGGC-------CCSCCSEEEECCC
T ss_pred CCCEEEEECC-cHHHHHHHHHHcccCceeeeccchHHHHHHHHHHHhhccccchhhhccc-------cccccceeeeccc
Confidence 5789999998 8899999999999888999999999775432 322 2333333321 2567899999844
|
| >d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase-like protein HI0607 species: Haemophilus influenzae [TaxId: 727]
Probab=96.42 E-value=0.0019 Score=51.37 Aligned_cols=40 Identities=10% Similarity=0.214 Sum_probs=35.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEecCcchhhh
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAME 138 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~l~R~~~~~~~ 138 (306)
.+++|+|.|| |+.+++++..|.+.|+ +|.++.|+.++++.
T Consensus 16 ~~~~vlIlGa-GGaarai~~aL~~~g~~~I~I~nR~~~ka~~ 56 (167)
T d1npya1 16 KNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQY 56 (167)
T ss_dssp TTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHH
T ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEecccHHHHHH
Confidence 4689999999 8899999999999996 89999999987543
|
| >d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]
Probab=96.36 E-value=0.007 Score=47.74 Aligned_cols=40 Identities=10% Similarity=0.141 Sum_probs=33.9
Q ss_pred CccCCCeEEEEcCCChHHHHHHHHHHHCCC--eEEEEecCcch
Q 021854 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRT--RIKALVKDKRN 135 (306)
Q Consensus 95 ~~~~~~~ilVtGatG~iG~~l~~~L~~~g~--~V~~l~R~~~~ 135 (306)
...++++|.|.|+ |.+|..++..|+..|. +++++.+++++
T Consensus 16 ~~~~~~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~ 57 (160)
T d1i0za1 16 ATVPNNKITVVGV-GQVGMACAISILGKSLADELALVDVLEDK 57 (160)
T ss_dssp CCCCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHH
T ss_pred ccCCCCeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccch
Confidence 4445789999997 9999999999999995 78888887765
|
| >d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH species: Lactobacillus confusus [TaxId: 1583]
Probab=96.34 E-value=0.0045 Score=48.11 Aligned_cols=64 Identities=13% Similarity=0.123 Sum_probs=43.7
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCC--CeEEEEecCcchhhh----------hcCCCceeeeccCCCHHHHHHHhcCccEE
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRNAME----------SFGTYVESMAGDASNKKFLKTALRGVRSI 167 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~g--~~V~~l~R~~~~~~~----------~~~~~v~~v~~D~~d~~~l~~~~~~~d~v 167 (306)
|+|.|+|| |.+|..++..|+.+| .+++++.++.+++.. ..+....+...|+ +.++++|+|
T Consensus 2 kKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~~~d~-------~~l~~adiV 73 (146)
T d1hyha1 2 RKIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVINDW-------AALADADVV 73 (146)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESCG-------GGGTTCSEE
T ss_pred CeEEEECc-CHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccccCCccceeccCH-------HHhccccEE
Confidence 79999996 999999999999888 378888877765221 1112233333332 236788888
Q ss_pred EEcC
Q 021854 168 ICPS 171 (306)
Q Consensus 168 i~~~ 171 (306)
|.++
T Consensus 74 Vita 77 (146)
T d1hyha1 74 ISTL 77 (146)
T ss_dssp EECC
T ss_pred EEec
Confidence 8763
|
| >d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Horse (Equus caballus) [TaxId: 9796]
Probab=96.26 E-value=0.0099 Score=46.95 Aligned_cols=75 Identities=15% Similarity=0.044 Sum_probs=48.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEecCcchhhhhcCCCceee--eccCCC-HHHHHHHh--cCccEEEEcC
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGTYVESM--AGDASN-KKFLKTAL--RGVRSIICPS 171 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~l~R~~~~~~~~~~~~v~~v--~~D~~d-~~~l~~~~--~~~d~vi~~~ 171 (306)
++.+|+|.|| |++|...+.++...|. +|+++.+++++.+.........+ ..+-.+ .+...+.. .++|++|-+.
T Consensus 28 ~GdtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~~~Ga~~~i~~~~~~~~~~~~~~~~~~~G~D~vid~~ 106 (176)
T d2jhfa2 28 QGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGVDFSFEVI 106 (176)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECS
T ss_pred CCCEEEEECC-CCcHHHHHHHHHHcCCceEEeecCcHHHHHHHHHhCCeeEEecCCchhHHHHHHHHHhcCCCCEEEecC
Confidence 5789999999 7799999999999985 88888888887443222222222 222222 22332222 4789999875
Q ss_pred Cc
Q 021854 172 EG 173 (306)
Q Consensus 172 ~g 173 (306)
+.
T Consensus 107 G~ 108 (176)
T d2jhfa2 107 GR 108 (176)
T ss_dssp CC
T ss_pred Cc
Confidence 43
|
| >d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Clostridium thermocellum [TaxId: 1515]
Probab=96.24 E-value=0.0083 Score=46.25 Aligned_cols=66 Identities=15% Similarity=0.231 Sum_probs=43.1
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCC--eEEEEecCcchhh----hhc-----CCCceeeeccCCCHHHHHHHhcCccEE
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKRT--RIKALVKDKRNAM----ESF-----GTYVESMAGDASNKKFLKTALRGVRSI 167 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g~--~V~~l~R~~~~~~----~~~-----~~~v~~v~~D~~d~~~l~~~~~~~d~v 167 (306)
+++|.|.|| |.+|+.++-.|+..+. ++.++.++.+++. ++. ........+| .+.++++|+|
T Consensus 1 r~KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~-------~~~~~~adiv 72 (142)
T d1y6ja1 1 RSKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAGD-------YSDVKDCDVI 72 (142)
T ss_dssp CCCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC--C-------GGGGTTCSEE
T ss_pred CCeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCcccCCCeeEeeCc-------HHHhCCCceE
Confidence 368999998 9999999999999884 8999988886522 111 1122222222 2358899999
Q ss_pred EEcCC
Q 021854 168 ICPSE 172 (306)
Q Consensus 168 i~~~~ 172 (306)
+.+++
T Consensus 73 vitag 77 (142)
T d1y6ja1 73 VVTAG 77 (142)
T ss_dssp EECCC
T ss_pred EEecc
Confidence 98733
|
| >d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=96.23 E-value=0.0038 Score=49.19 Aligned_cols=92 Identities=11% Similarity=0.138 Sum_probs=58.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEecCcchhh--hhcCCCceeeeccCCCH-HHHHHHh--cCccEEEEcC
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAM--ESFGTYVESMAGDASNK-KFLKTAL--RGVRSIICPS 171 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~l~R~~~~~~--~~~~~~v~~v~~D~~d~-~~l~~~~--~~~d~vi~~~ 171 (306)
++.+|+|+|++|.+|...++.+...|+ +|+++.+++++.+ ..++.. .++..+-.|. +.+.+.. .++|++|.++
T Consensus 27 ~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~~~Ga~-~~i~~~~~~~~~~~~~~~~~~~~d~vid~~ 105 (170)
T d1jvba2 27 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGAD-YVINASMQDPLAEIRRITESKGVDAVIDLN 105 (170)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHTCS-EEEETTTSCHHHHHHHHTTTSCEEEEEESC
T ss_pred CCCEEEEEeccccceeeeeecccccccccccccccchhhHHHHHHcCCc-eeeccCCcCHHHHHHHHhhcccchhhhccc
Confidence 468999999999999999999888885 8888888877633 223321 2333332332 2333333 3579999885
Q ss_pred Cch-h----hhcccccCCCEEEEecC
Q 021854 172 EGF-I----SNAGSLKGVQHVILLSQ 192 (306)
Q Consensus 172 ~g~-~----~~~a~~~gvkr~V~iSS 192 (306)
++. . .+.++.. .++|.++-
T Consensus 106 g~~~~~~~a~~~l~~~--G~iv~~G~ 129 (170)
T d1jvba2 106 NSEKTLSVYPKALAKQ--GKYVMVGL 129 (170)
T ss_dssp CCHHHHTTGGGGEEEE--EEEEECCS
T ss_pred ccchHHHhhhhhcccC--CEEEEecc
Confidence 542 2 2233333 47888764
|
| >d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=96.23 E-value=0.011 Score=46.26 Aligned_cols=71 Identities=8% Similarity=0.163 Sum_probs=47.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhh--hcCCCceeeeccCCC-HHHHHHHhcCccEEEEc
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME--SFGTYVESMAGDASN-KKFLKTALRGVRSIICP 170 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~--~~~~~v~~v~~D~~d-~~~l~~~~~~~d~vi~~ 170 (306)
++.+|+|.|+ |.+|...++.+...|++|+++.+++++.+. .++. .+++..+-.| .+.+.+...+.+.+|.+
T Consensus 27 ~g~~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~~~~~~~~a~~~Ga-~~~i~~~~~~~~~~~~~~~~g~~~~i~~ 100 (166)
T d1llua2 27 PGQWVAISGI-GGLGHVAVQYARAMGLHVAAIDIDDAKLELARKLGA-SLTVNARQEDPVEAIQRDIGGAHGVLVT 100 (166)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTC-SEEEETTTSCHHHHHHHHHSSEEEEEEC
T ss_pred CCCEEEEeec-cccHHHHHHHHHHcCCccceecchhhHHHhhhccCc-cccccccchhHHHHHHHhhcCCcccccc
Confidence 4789999987 999999998888899999999999877432 2332 1223222222 34455555666665555
|
| >d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Chloroflexus aurantiacus [TaxId: 1108]
Probab=96.19 E-value=0.013 Score=45.11 Aligned_cols=66 Identities=15% Similarity=0.062 Sum_probs=45.0
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEecCcchhhh----------hcCCCceee-eccCCCHHHHHHHhcCccE
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAME----------SFGTYVESM-AGDASNKKFLKTALRGVRS 166 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~l~R~~~~~~~----------~~~~~v~~v-~~D~~d~~~l~~~~~~~d~ 166 (306)
+++|.|.|+ |.+|..++-.|+..+. +++++..+++++.. ..+...++. ..|+. .++++|+
T Consensus 1 r~KI~IIGa-G~VG~~~A~~l~~~~l~dl~l~D~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~d~~-------~~~~adv 72 (142)
T d1uxja1 1 RKKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNYA-------DTANSDV 72 (142)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCGG-------GGTTCSE
T ss_pred CCeEEEECC-CHHHHHHHHHHHhCCcceEEEEeeccccchhHHHHhhccccccCCCCEEEecCcHH-------HhcCCCE
Confidence 479999997 9999999999988774 88888877765221 112223332 22332 3788999
Q ss_pred EEEcCC
Q 021854 167 IICPSE 172 (306)
Q Consensus 167 vi~~~~ 172 (306)
||.+++
T Consensus 73 vvitag 78 (142)
T d1uxja1 73 IVVTSG 78 (142)
T ss_dssp EEECCS
T ss_pred EEEeee
Confidence 998743
|
| >d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=96.19 E-value=0.031 Score=44.19 Aligned_cols=95 Identities=12% Similarity=0.050 Sum_probs=60.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEecCcchhh--hhcCCCceeeeccCCC-HHHHHHHh--cCccEEEEcC
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAM--ESFGTYVESMAGDASN-KKFLKTAL--RGVRSIICPS 171 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~l~R~~~~~~--~~~~~~v~~v~~D~~d-~~~l~~~~--~~~d~vi~~~ 171 (306)
++.+|+|+|+ |++|...++.+...|. +|+++.+++++++ ..++....+-.-|-.+ .+.+.+.. .++|++|.+.
T Consensus 29 ~g~tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak~~GA~~~in~~~~~~~~~~~~~~~~g~G~d~vi~~~ 107 (176)
T d1d1ta2 29 PGSTCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAVGATECISPKDSTKPISEVLSEMTGNNVGYTFEVI 107 (176)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHHTCSEEECGGGCSSCHHHHHHHHHTSCCCEEEECS
T ss_pred CCCEEEEECC-CchhHHHHHHHHHcCCceEEEecCcHHHHHHHHhcCCcEEECccccchHHHHHHHHhccccceEEEEeC
Confidence 5789999997 9999999999999995 8999999998843 2344221111122222 33344433 5789999885
Q ss_pred Cch--hhhccc--ccCCCEEEEecCc
Q 021854 172 EGF--ISNAGS--LKGVQHVILLSQL 193 (306)
Q Consensus 172 ~g~--~~~~a~--~~gvkr~V~iSS~ 193 (306)
++. ...+.. ..+-.++|+++..
T Consensus 108 g~~~~~~~a~~~~~~~~G~~v~vG~~ 133 (176)
T d1d1ta2 108 GHLETMIDALASCHMNYGTSVVVGVP 133 (176)
T ss_dssp CCHHHHHHHHTTSCTTTCEEEECSCC
T ss_pred CchHHHHHHHHHhhcCCeEEEEEEcc
Confidence 543 333322 2344688888754
|
| >d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.11 E-value=0.015 Score=45.65 Aligned_cols=94 Identities=10% Similarity=0.003 Sum_probs=60.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEecCcchhh--hhcCCCceeeeccCCCHHHHHHHh-----cCccEEEE
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAM--ESFGTYVESMAGDASNKKFLKTAL-----RGVRSIIC 169 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~l~R~~~~~~--~~~~~~v~~v~~D~~d~~~l~~~~-----~~~d~vi~ 169 (306)
++.+|+|.|+ |.+|...++.+...|+ +|+++.+++++++ ..++.. .++..+-.+.....+.+ .++|++|.
T Consensus 26 ~gd~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a~~~Ga~-~~~~~~~~~~~~~~~~~~~~~g~g~Dvvid 103 (171)
T d1pl8a2 26 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGAD-LVLQISKESPQEIARKVEGQLGCKPEVTIE 103 (171)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCS-EEEECSSCCHHHHHHHHHHHHTSCCSEEEE
T ss_pred CCCEEEEECC-CccHHHHHHHHHHcCCceEEeccCCHHHHHHHHHhCCc-ccccccccccccccccccccCCCCceEEEe
Confidence 4689999988 9999999999989998 7989888887743 233321 23333334544444333 36899998
Q ss_pred cCCch-hhh-cccc-cCCCEEEEecCc
Q 021854 170 PSEGF-ISN-AGSL-KGVQHVILLSQL 193 (306)
Q Consensus 170 ~~~g~-~~~-~a~~-~gvkr~V~iSS~ 193 (306)
++++. ..+ +... ..-.++++++..
T Consensus 104 ~~G~~~~~~~a~~~~~~gG~iv~~G~~ 130 (171)
T d1pl8a2 104 CTGAEASIQAGIYATRSGGTLVLVGLG 130 (171)
T ss_dssp CSCCHHHHHHHHHHSCTTCEEEECSCC
T ss_pred ccCCchhHHHHHHHhcCCCEEEEEecC
Confidence 86543 222 2211 123578887743
|
| >d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Putative formate dehydrogenase species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]
Probab=96.09 E-value=0.0073 Score=48.57 Aligned_cols=60 Identities=20% Similarity=0.263 Sum_probs=47.7
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEc
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~ 170 (306)
..+++|.|.|. |.||+.+++.+...|.+|++..|.+.... .. -..+++++++.+|+|+++
T Consensus 40 l~gk~vgIiG~-G~IG~~va~~l~~~g~~v~~~d~~~~~~~------~~-------~~~~l~ell~~sDiv~~~ 99 (181)
T d1qp8a1 40 IQGEKVAVLGL-GEIGTRVGKILAALGAQVRGFSRTPKEGP------WR-------FTNSLEEALREARAAVCA 99 (181)
T ss_dssp CTTCEEEEESC-STHHHHHHHHHHHTTCEEEEECSSCCCSS------SC-------CBSCSHHHHTTCSEEEEC
T ss_pred ccCceEEEecc-ccccccceeeeeccccccccccccccccc------ee-------eeechhhhhhccchhhcc
Confidence 35799999999 88999999999999999999988763211 11 112567899999999976
|
| >d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: 6-phosphogluconate dehydrogenase species: Sheep (Ovis orientalis aries) [TaxId: 9940]
Probab=96.03 E-value=0.0055 Score=48.74 Aligned_cols=70 Identities=14% Similarity=0.096 Sum_probs=53.6
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCcee-eeccCCCHHHHHHHhcCccEEEEc
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVES-MAGDASNKKFLKTALRGVRSIICP 170 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~-v~~D~~d~~~l~~~~~~~d~vi~~ 170 (306)
..|.|.|- |.+|..+++.|++.||+|.+..|++++.++......+. ........+++...+..+|.++.+
T Consensus 3 ~nIg~IGl-G~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~ii~~ 73 (176)
T d2pgda2 3 ADIALIGL-AVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVLGAHSLEEMVSKLKKPRRIILL 73 (176)
T ss_dssp BSEEEECC-SHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHHBCSSCEEEEC
T ss_pred CcEEEEeE-hHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHhccccccccchhhhhhhhhhhcccceEEEe
Confidence 57899988 99999999999999999999999998865543221110 111245677888889999999877
|
| >d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=96.01 E-value=0.0064 Score=44.93 Aligned_cols=39 Identities=18% Similarity=0.135 Sum_probs=34.6
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcch
Q 021854 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN 135 (306)
Q Consensus 96 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~ 135 (306)
....++++|.|| |++|.+++..|.+.|.+|+++.|...-
T Consensus 19 ~~~p~~v~IiGg-G~ig~E~A~~l~~~G~~Vtlve~~~~i 57 (117)
T d1ebda2 19 GEVPKSLVVIGG-GYIGIELGTAYANFGTKVTILEGAGEI 57 (117)
T ss_dssp SSCCSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSSS
T ss_pred hhcCCeEEEECC-CccceeeeeeecccccEEEEEEeccee
Confidence 344689999999 999999999999999999999988743
|
| >d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=95.96 E-value=0.011 Score=46.45 Aligned_cols=38 Identities=18% Similarity=0.286 Sum_probs=32.2
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCC--eEEEEecCcch
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRT--RIKALVKDKRN 135 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~--~V~~l~R~~~~ 135 (306)
.++.+|.|.|| |.+|..++..|+..|. +++++.++.++
T Consensus 17 ~~~~KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~~~ 56 (159)
T d2ldxa1 17 LSRCKITVVGV-GDVGMACAISILLKGLADELALVDADTDK 56 (159)
T ss_dssp CCCCEEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSCHHH
T ss_pred CCCCeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCchh
Confidence 45678999997 9999999999999884 78888877765
|
| >d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Thermotoga maritima [TaxId: 2336]
Probab=95.93 E-value=0.0072 Score=45.82 Aligned_cols=58 Identities=12% Similarity=0.014 Sum_probs=39.0
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHh
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTAL 161 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~ 161 (306)
|+|.|.|++|.+|+.+.+.+.+.++++++....... . .+. +.. +..|++.++.+.+.+
T Consensus 1 mki~i~G~~GrMG~~i~~~~~~~~~~l~~~id~~~~-~-~~~-~~D-VvIDFS~p~~~~~~l 58 (128)
T d1vm6a3 1 MKYGIVGYSGRMGQEIQKVFSEKGHELVLKVDVNGV-E-ELD-SPD-VVIDFSSPEALPKTV 58 (128)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEEETTEE-E-ECS-CCS-EEEECSCGGGHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHhcCCCeEEEEECCCcH-H-Hhc-cCC-EEEEecCHHHHHHHH
Confidence 589999999999999999999999998865433211 1 111 122 355777766555444
|
| >d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-lactate dehydrogenase species: Lactobacillus helveticus [TaxId: 1587]
Probab=95.93 E-value=0.006 Score=49.80 Aligned_cols=63 Identities=13% Similarity=0.001 Sum_probs=47.8
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEc
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~ 170 (306)
..+++|.|.|. |.||+.+++.|...|++|++..+......... . ....+++++++.+|+|+.+
T Consensus 41 l~gk~vgIiG~-G~IG~~va~~l~~fg~~V~~~d~~~~~~~~~~--~--------~~~~~l~~~l~~sDii~~~ 103 (197)
T d1j4aa1 41 VRDQVVGVVGT-GHIGQVFMQIMEGFGAKVITYDIFRNPELEKK--G--------YYVDSLDDLYKQADVISLH 103 (197)
T ss_dssp GGGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCHHHHHT--T--------CBCSCHHHHHHHCSEEEEC
T ss_pred ccCCeEEEecc-cccchhHHHhHhhhcccccccCcccccccccc--e--------eeecccccccccccccccc
Confidence 45799999998 99999999999999999999876654322111 1 1123577889999999866
|
| >d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=95.91 E-value=0.015 Score=44.50 Aligned_cols=64 Identities=20% Similarity=0.307 Sum_probs=44.8
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCC--CeEEEEecCcchhhh---------hcCCCceeeeccCCCHHHHHHHhcCccEEE
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRNAME---------SFGTYVESMAGDASNKKFLKTALRGVRSII 168 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~g--~~V~~l~R~~~~~~~---------~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi 168 (306)
++|.|.|| |.+|+.++..|+.++ .++.++.++++++.. .+.........|+ +.++++|+||
T Consensus 1 mKI~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~~~~~-------~~~~~adivv 72 (140)
T d1a5za1 1 MKIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGDY-------ADLKGSDVVI 72 (140)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECCG-------GGGTTCSEEE
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEecccccccchhccccccccccccccccCCcH-------HHhcCCCEEE
Confidence 68999997 999999999998887 478888887765221 1122334333332 3478999999
Q ss_pred EcC
Q 021854 169 CPS 171 (306)
Q Consensus 169 ~~~ 171 (306)
.++
T Consensus 73 ita 75 (140)
T d1a5za1 73 VAA 75 (140)
T ss_dssp ECC
T ss_pred Eec
Confidence 873
|
| >d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: L-alanine dehydrogenase species: Phormidium lapideum [TaxId: 32060]
Probab=95.90 E-value=0.01 Score=47.04 Aligned_cols=68 Identities=18% Similarity=0.157 Sum_probs=56.5
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhh---hcCCCceeeeccCCCHHHHHHHhcCccEEEEc
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~---~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~ 170 (306)
.-+|+|.|| |-.|..-++.....|.+|.++..+.++++. .++..+++ -..+.+.+++.++.+|+||.+
T Consensus 32 pa~V~ViGa-GvaG~~A~~~A~~lGA~V~~~D~~~~~l~~l~~~~~~~~~~---~~~~~~~l~~~~~~aDivI~a 102 (168)
T d1pjca1 32 PGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSRVEL---LYSNSAEIETAVAEADLLIGA 102 (168)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGSEE---EECCHHHHHHHHHTCSEEEEC
T ss_pred CcEEEEECC-ChHHHHHHHHHhhCCCEEEEEeCcHHHHHHHHHhhccccee---ehhhhhhHHHhhccCcEEEEe
Confidence 589999999 999999999999999999999999877543 33434443 346788999999999999987
|
| >d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Bacterial secondary alcohol dehydrogenase species: Clostridium beijerinckii [TaxId: 1520]
Probab=95.90 E-value=0.011 Score=46.95 Aligned_cols=91 Identities=14% Similarity=0.142 Sum_probs=56.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEecCcchhh--hhcCCCceeeeccCCC-HHHHHHHhc--CccEEEEcC
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAM--ESFGTYVESMAGDASN-KKFLKTALR--GVRSIICPS 171 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~l~R~~~~~~--~~~~~~v~~v~~D~~d-~~~l~~~~~--~~d~vi~~~ 171 (306)
++.+|+|.|+ |.+|...++.+...|+ +|+++.+++++.+ ..++. .+++...-.+ .+.+.+... ++|+||-++
T Consensus 27 ~g~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a~~lGa-~~~i~~~~~~~~~~v~~~t~g~G~D~vid~~ 104 (174)
T d1jqba2 27 MGSSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGA-TDILNYKNGHIEDQVMKLTNGKGVDRVIMAG 104 (174)
T ss_dssp TTCCEEEECC-SHHHHHHHHHHHTTTCSCEEEECCCHHHHHHHHHHTC-SEEECGGGSCHHHHHHHHTTTSCEEEEEECS
T ss_pred CCCEEEEEcC-CcchhhhhhhhhcccccccccccchhhhHHHHHhhCc-cccccccchhHHHHHHHHhhccCcceEEEcc
Confidence 4789999987 9999999988888897 7888888887633 23442 1222221122 344555553 589999874
Q ss_pred Cc--hhh---hcccccCCCEEEEecC
Q 021854 172 EG--FIS---NAGSLKGVQHVILLSQ 192 (306)
Q Consensus 172 ~g--~~~---~~a~~~gvkr~V~iSS 192 (306)
++ .+. +.++. -.++++++-
T Consensus 105 g~~~~~~~a~~~~~~--~G~iv~~G~ 128 (174)
T d1jqba2 105 GGSETLSQAVKMVKP--GGIISNINY 128 (174)
T ss_dssp SCTTHHHHHHHHEEE--EEEEEECCC
T ss_pred CCHHHHHHHHHHHhc--CCEEEEEee
Confidence 43 222 22222 246777653
|
| >d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Putative semialdehyde dehydrogenase species: Rice (Oryza sativa) [TaxId: 4530]
Probab=95.89 E-value=0.0054 Score=49.39 Aligned_cols=33 Identities=18% Similarity=0.190 Sum_probs=27.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCC-CeEEEEe
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKR-TRIKALV 130 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~l~ 130 (306)
++.+|.|.||||++|+++++.|..+- .++..+.
T Consensus 4 ~kikVaIlGATGyvG~elirLL~~HP~~ei~~l~ 37 (183)
T d2cvoa1 4 EEVRIAVLGASGYTGAEIVRLLANHPQFRIKVMT 37 (183)
T ss_dssp SCEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEE
T ss_pred CccEEEEECcccHHHHHHHHHHHhCCCceEEEEe
Confidence 46789999999999999999998764 4666554
|
| >d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Archaeon Haloarcula marismortui [TaxId: 2238]
Probab=95.83 E-value=0.015 Score=44.70 Aligned_cols=64 Identities=8% Similarity=0.173 Sum_probs=42.7
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCC--eEEEEecCc--chh----hhh-----cCCCceeeeccCCCHHHHHHHhcCccE
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVKRT--RIKALVKDK--RNA----MES-----FGTYVESMAGDASNKKFLKTALRGVRS 166 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~g~--~V~~l~R~~--~~~----~~~-----~~~~v~~v~~D~~d~~~l~~~~~~~d~ 166 (306)
.+|.|+||+|.+|+.++..|+.++. ++.++..+. +++ .+. +....++...|+. .++++|+
T Consensus 1 sKV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~~~~~~~i~~~~~~-------~~~~aDi 73 (142)
T d1o6za1 1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGGYE-------DTAGSDV 73 (142)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECCGG-------GGTTCSE
T ss_pred CeEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhcccccCCceEeeCCHH-------HhhhcCE
Confidence 3799999999999999999999884 677666432 221 111 2334444444432 2678999
Q ss_pred EEEc
Q 021854 167 IICP 170 (306)
Q Consensus 167 vi~~ 170 (306)
||.+
T Consensus 74 Vvit 77 (142)
T d1o6za1 74 VVIT 77 (142)
T ss_dssp EEEC
T ss_pred EEEe
Confidence 9876
|
| >d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Azotobacter vinelandii [TaxId: 354]
Probab=95.83 E-value=0.0086 Score=44.51 Aligned_cols=38 Identities=11% Similarity=0.008 Sum_probs=34.3
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcc
Q 021854 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR 134 (306)
Q Consensus 96 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~ 134 (306)
+..+++++|.|| |+||-+++..|.+.|.+|+++.|...
T Consensus 19 ~~~p~~i~IiG~-G~ig~E~A~~l~~~G~~Vtiv~~~~~ 56 (119)
T d3lada2 19 QNVPGKLGVIGA-GVIGLELGSVWARLGAEVTVLEAMDK 56 (119)
T ss_dssp SSCCSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred ccCCCeEEEECC-ChHHHHHHHHHHHcCCceEEEEeecc
Confidence 345689999999 99999999999999999999998874
|
| >d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Chlorobium vibrioforme [TaxId: 1098]
Probab=95.82 E-value=0.016 Score=44.42 Aligned_cols=64 Identities=9% Similarity=0.005 Sum_probs=44.1
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCC--CeEEEEecCcchhhh----------hcCCCceeeeccCCCHHHHHHHhcCccEE
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRNAME----------SFGTYVESMAGDASNKKFLKTALRGVRSI 167 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~g--~~V~~l~R~~~~~~~----------~~~~~v~~v~~D~~d~~~l~~~~~~~d~v 167 (306)
|+|.|+|| |.+|+.++..|+..+ .++.++.+++++... .+....++... .|+ +.++++|+|
T Consensus 1 mKI~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~~--~~~----~~~~dadvv 73 (142)
T d1guza1 1 MKITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGS--NDY----ADTANSDIV 73 (142)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEE--SCG----GGGTTCSEE
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhcccchhcccceEEec--CCH----HHhcCCeEE
Confidence 68999997 999999999999988 488888888765221 11223333322 222 347888998
Q ss_pred EEc
Q 021854 168 ICP 170 (306)
Q Consensus 168 i~~ 170 (306)
+.+
T Consensus 74 vit 76 (142)
T d1guza1 74 IIT 76 (142)
T ss_dssp EEC
T ss_pred EEE
Confidence 876
|
| >d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=95.82 E-value=0.018 Score=44.25 Aligned_cols=65 Identities=12% Similarity=0.229 Sum_probs=45.0
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCC--CeEEEEecCcchhhh----------hcCCCceeeeccCCCHHHHHHHhcCccEE
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRNAME----------SFGTYVESMAGDASNKKFLKTALRGVRSI 167 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~g--~~V~~l~R~~~~~~~----------~~~~~v~~v~~D~~d~~~l~~~~~~~d~v 167 (306)
|+|.|.|| |.+|..++..|+.+| .++.++.++++++.. .++...++... .|+ +.++++|+|
T Consensus 1 MKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~~~~~~~~~~~i~~~--~d~----~~~~~adiV 73 (142)
T d1ojua1 1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG--ADY----SLLKGSEII 73 (142)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEE--SCG----GGGTTCSEE
T ss_pred CEEEEECc-CHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhhhccccCCCCccccC--CCH----HHhccccEE
Confidence 68999997 999999999999887 378888887766321 12222333322 122 258899999
Q ss_pred EEcC
Q 021854 168 ICPS 171 (306)
Q Consensus 168 i~~~ 171 (306)
|.++
T Consensus 74 vita 77 (142)
T d1ojua1 74 VVTA 77 (142)
T ss_dssp EECC
T ss_pred EEec
Confidence 9873
|
| >d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Aquifex aeolicus [TaxId: 63363]
Probab=95.80 E-value=0.0086 Score=46.95 Aligned_cols=68 Identities=12% Similarity=0.018 Sum_probs=45.0
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCC--eEEEEecCcchhhhhcCCC-ceeeeccCCCHHHHHHHhcCccEEEEcCC
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKRT--RIKALVKDKRNAMESFGTY-VESMAGDASNKKFLKTALRGVRSIICPSE 172 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g~--~V~~l~R~~~~~~~~~~~~-v~~v~~D~~d~~~l~~~~~~~d~vi~~~~ 172 (306)
+++|+|.|+ |.+|..+++.|.+.|+ +|++..|+++..+.....+ +..+..+.. ......+|.||++++
T Consensus 1 Mk~I~IIG~-G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~~~~~~~~~~~~~~-----~~~~~~~dlIila~p 71 (171)
T d2g5ca2 1 MQNVLIVGV-GFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIA-----KVEDFSPDFVMLSSP 71 (171)
T ss_dssp CCEEEEESC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCGG-----GGGGTCCSEEEECSC
T ss_pred CCEEEEEcc-CHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHHHhhcchhhhhhhh-----hhhccccccccccCC
Confidence 367999987 9999999999999996 6788888876644322221 112222221 122346899998855
|
| >d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=95.79 E-value=0.017 Score=44.95 Aligned_cols=74 Identities=11% Similarity=0.110 Sum_probs=49.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCC-C-HHHHHHHhcCccEEEEcCC
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDAS-N-KKFLKTALRGVRSIICPSE 172 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~-d-~~~l~~~~~~~d~vi~~~~ 172 (306)
++.+|+|.|+ |.+|...++.+...|++|+++.+++++......-+...+...-. | .+.+.....+.+.+|..++
T Consensus 27 ~g~~vlv~G~-G~iG~~a~~~a~~~g~~v~~~~~~~~r~~~~k~~Ga~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 102 (168)
T d1rjwa2 27 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKELGADLVVNPLKEDAAKFMKEKVGGVHAAVVTAV 102 (168)
T ss_dssp TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSEEECTTTSCHHHHHHHHHSSEEEEEESSC
T ss_pred CCCEEEEeec-ccchhhhhHHHhcCCCeEeccCCCHHHhhhhhhcCcceecccccchhhhhcccccCCCceEEeecC
Confidence 4789999986 99999999888889999999999888743221122333322221 2 3446666677776665533
|
| >d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Mammalian thioredoxin reductase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=95.74 E-value=0.008 Score=44.96 Aligned_cols=35 Identities=14% Similarity=0.040 Sum_probs=32.0
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecC
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKD 132 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~ 132 (306)
...++++|.|| |.||.+++..|.+.|.+|+++.|+
T Consensus 18 ~~P~~vvIIGg-G~iG~E~A~~l~~lG~~Vtii~~~ 52 (122)
T d1h6va2 18 YCPGKTLVVGA-SYVALECAGFLAGIGLDVTVMVRS 52 (122)
T ss_dssp SCCCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred cCCCeEEEECC-CccHHHHHHHHhhcCCeEEEEEec
Confidence 34689999999 999999999999999999999875
|
| >d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Mouse (Mus musculus), class II [TaxId: 10090]
Probab=95.72 E-value=0.026 Score=44.63 Aligned_cols=93 Identities=14% Similarity=0.116 Sum_probs=57.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEecCcchh--hhhcCCCceeeeccCC--CHHHHHHHh--cCccEEEEc
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNA--MESFGTYVESMAGDAS--NKKFLKTAL--RGVRSIICP 170 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~l~R~~~~~--~~~~~~~v~~v~~D~~--d~~~l~~~~--~~~d~vi~~ 170 (306)
++.+|+|+|+ |.||...++.+...|+ .|++..+++++. .+.++. ..++...-. ..+.+.+.. .++|++|-+
T Consensus 28 ~G~~VlV~G~-G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~a~~~Ga-~~~i~~~~~~~~~~~~~~~~~~~G~d~vie~ 105 (174)
T d1e3ia2 28 PGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGA-TDCLNPRELDKPVQDVITELTAGGVDYSLDC 105 (174)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTC-SEEECGGGCSSCHHHHHHHHHTSCBSEEEES
T ss_pred CCCEEEEECC-ChHHHHHHHHHHHhCCceeeeeccchHHHHHHHHhCC-CcccCCccchhhhhhhHhhhhcCCCcEEEEe
Confidence 5789999987 9999999999999997 576777777663 233442 122221111 223333322 578999988
Q ss_pred CCch--hhhccc--ccCCCEEEEecC
Q 021854 171 SEGF--ISNAGS--LKGVQHVILLSQ 192 (306)
Q Consensus 171 ~~g~--~~~~a~--~~gvkr~V~iSS 192 (306)
++.. +..+.+ ..+-.++++++-
T Consensus 106 ~G~~~~~~~a~~~~~~g~G~~v~vG~ 131 (174)
T d1e3ia2 106 AGTAQTLKAAVDCTVLGWGSCTVVGA 131 (174)
T ss_dssp SCCHHHHHHHHHTBCTTTCEEEECCC
T ss_pred cccchHHHHHHHHhhcCCeEEEecCC
Confidence 5542 333322 233358888764
|
| >d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]
Probab=95.71 E-value=0.018 Score=45.84 Aligned_cols=24 Identities=13% Similarity=0.151 Sum_probs=21.5
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHC
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVK 122 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~ 122 (306)
..+|.|+||+|.||+.++..|++.
T Consensus 24 ~~kV~I~GA~G~Ig~~l~~~La~g 47 (175)
T d7mdha1 24 LVNIAVSGAAGMISNHLLFKLASG 47 (175)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHT
T ss_pred CcEEEEECCCcHHHHHHHHHHHcC
Confidence 458999999999999999999874
|
| >d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Transcription corepressor CtbP species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]
Probab=95.66 E-value=0.004 Score=50.71 Aligned_cols=66 Identities=11% Similarity=-0.033 Sum_probs=49.1
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEc
Q 021854 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (306)
Q Consensus 96 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~ 170 (306)
+..++++.|.|. |.||+.+++.|...|++|....+......... .++....+++++++.+|+|+..
T Consensus 46 eL~gktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~--------~~~~~~~~l~~ll~~sD~i~~~ 111 (193)
T d1mx3a1 46 RIRGETLGIIGL-GRVGQAVALRAKAFGFNVLFYDPYLSDGVERA--------LGLQRVSTLQDLLFHSDCVTLH 111 (193)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECTTSCTTHHHH--------HTCEECSSHHHHHHHCSEEEEC
T ss_pred eeeCceEEEecc-ccccccceeeeeccccceeeccCcccccchhh--------hccccccchhhccccCCEEEEe
Confidence 456899999998 99999999999999999999887664321111 0112234677888999999865
|
| >d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Toxoplasma gondii [TaxId: 5811]
Probab=95.65 E-value=0.026 Score=43.85 Aligned_cols=69 Identities=17% Similarity=0.104 Sum_probs=45.7
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEecCcchhhhh----------cCCCceeeeccCCCHHHHHHHhcCc
Q 021854 96 EEARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMES----------FGTYVESMAGDASNKKFLKTALRGV 164 (306)
Q Consensus 96 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~l~R~~~~~~~~----------~~~~v~~v~~D~~d~~~l~~~~~~~ 164 (306)
..+.++|.|.|| |.+|+.++..|...+. +++++..+++++... .+........ ...+.+++++
T Consensus 4 ~~k~~KI~IIGa-G~VG~~lA~~l~~~~~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~-----~~~~~~~~~a 77 (154)
T d1pzga1 4 VQRRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAE-----YSYEAALTGA 77 (154)
T ss_dssp CSCCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEE-----CSHHHHHTTC
T ss_pred ccCCCcEEEECC-CHHHHHHHHHHHhCCCceEEEEEeccccchhHHHHHhhhccccCCeeEEecc-----CchhhhhcCC
Confidence 345789999998 9999999988888774 888887777653211 1111111111 1234678899
Q ss_pred cEEEEc
Q 021854 165 RSIICP 170 (306)
Q Consensus 165 d~vi~~ 170 (306)
|+|+.+
T Consensus 78 diVvit 83 (154)
T d1pzga1 78 DCVIVT 83 (154)
T ss_dssp SEEEEC
T ss_pred CeEEEe
Confidence 999986
|
| >d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent ferredoxin reductase, BphA4 species: Pseudomonas sp., KKS102 [TaxId: 306]
Probab=95.65 E-value=0.011 Score=44.03 Aligned_cols=37 Identities=14% Similarity=0.206 Sum_probs=33.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcch
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN 135 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~ 135 (306)
..++++|.|| |++|-+++..|.++|.+|+++.|.+.-
T Consensus 29 ~~~~vvIIGg-G~iG~E~A~~l~~~g~~Vtli~~~~~~ 65 (121)
T d1d7ya2 29 PQSRLLIVGG-GVIGLELAATARTAGVHVSLVETQPRL 65 (121)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSST
T ss_pred cCCeEEEECc-chhHHHHHHHhhcccceEEEEeecccc
Confidence 3589999999 999999999999999999999998854
|
| >d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=95.64 E-value=0.0098 Score=44.40 Aligned_cols=37 Identities=8% Similarity=0.018 Sum_probs=33.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcch
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN 135 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~ 135 (306)
..++++|.|| |+||.+++..|.+.|.+|+++.|...-
T Consensus 22 ~p~~~vIiG~-G~ig~E~A~~l~~lG~~Vtii~~~~~~ 58 (122)
T d1v59a2 22 IPKRLTIIGG-GIIGLEMGSVYSRLGSKVTVVEFQPQI 58 (122)
T ss_dssp CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCCeEEEECC-CchHHHHHHHHHhhCcceeEEEecccc
Confidence 4689999999 999999999999999999999987743
|
| >d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Streptococcus pneumoniae [TaxId: 1313]
Probab=95.64 E-value=0.0021 Score=50.44 Aligned_cols=25 Identities=20% Similarity=0.171 Sum_probs=22.3
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCC
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVKRT 124 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~g~ 124 (306)
-+|.|.||||++|+++++.|.++.+
T Consensus 2 ~kVaIvGATGyvG~eLirlL~~H~f 26 (154)
T d2gz1a1 2 YTVAVVGATGAVGAQMIKMLEESTL 26 (154)
T ss_dssp EEEEEETTTSHHHHHHHHHHHTCCS
T ss_pred CEEEEECCCcHHHHHHHHHHHcCCC
Confidence 4799999999999999999988764
|
| >d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=95.63 E-value=0.011 Score=45.72 Aligned_cols=66 Identities=15% Similarity=0.132 Sum_probs=41.2
Q ss_pred CeEEEEcCCChHHHHHHHHHHH-CC--CeEEEEecCcchhh----hhc--C--CCceeeeccCCCHHHHHHHhcCccEEE
Q 021854 100 DAVLVTDGDSDIGQMVILSLIV-KR--TRIKALVKDKRNAM----ESF--G--TYVESMAGDASNKKFLKTALRGVRSII 168 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~-~g--~~V~~l~R~~~~~~----~~~--~--~~v~~v~~D~~d~~~l~~~~~~~d~vi 168 (306)
|+|.|+||+|.+|+.++..|.. .+ .++.++...+ .+. +.. . ..... ...-.++ +.++++|+||
T Consensus 1 MKV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~-~~~g~a~Dl~h~~~~~~~~~-~~~~~~~----~~~~~aDvvv 74 (145)
T d2cmda1 1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHIPTAVKIKG-FSGEDAT----PALEGADVVL 74 (145)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSST-THHHHHHHHHTSCSSCEEEE-ECSSCCH----HHHTTCSEEE
T ss_pred CEEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccc-cchhHHHHHHCCccccCCcE-EEcCCCc----cccCCCCEEE
Confidence 6899999999999999987754 34 5777776543 321 111 1 11111 1122232 3588999999
Q ss_pred EcC
Q 021854 169 CPS 171 (306)
Q Consensus 169 ~~~ 171 (306)
.++
T Consensus 75 ita 77 (145)
T d2cmda1 75 ISA 77 (145)
T ss_dssp ECC
T ss_pred ECC
Confidence 873
|
| >d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: S-adenosylhomocystein hydrolase species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.63 E-value=0.016 Score=45.65 Aligned_cols=69 Identities=16% Similarity=0.049 Sum_probs=53.2
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcCCc
Q 021854 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG 173 (306)
Q Consensus 96 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~g 173 (306)
...+|+++|.|- |.||+.+++.|...|.+|++...++-++.+..-....+. .+++++...|++|.+++.
T Consensus 21 ~l~Gk~v~V~Gy-G~iG~g~A~~~rg~G~~V~v~e~dp~~al~A~~dG~~v~--------~~~~a~~~adivvtaTGn 89 (163)
T d1li4a1 21 MIAGKVAVVAGY-GDVGKGCAQALRGFGARVIITEIDPINALQAAMEGYEVT--------TMDEACQEGNIFVTTTGC 89 (163)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEEC--------CHHHHTTTCSEEEECSSC
T ss_pred eecCCEEEEecc-ccccHHHHHHHHhCCCeeEeeecccchhHHhhcCceEee--------ehhhhhhhccEEEecCCC
Confidence 346899999987 999999999999999999999998866433322233322 356788899999998664
|
| >d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Short chain L-3-hydroxyacyl CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.62 E-value=0.0073 Score=48.95 Aligned_cols=37 Identities=11% Similarity=0.051 Sum_probs=34.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcch
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN 135 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~ 135 (306)
+-++|.|.|| |.+|+.++..++..|++|+++.++++.
T Consensus 3 ~IkkvaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~ 39 (192)
T d1f0ya2 3 IVKHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDI 39 (192)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred eeEEEEEECc-CHHHHHHHHHHHhCCCcEEEEECChHH
Confidence 4689999999 999999999999999999999999865
|
| >d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH peroxidase species: Enterococcus faecalis [TaxId: 1351]
Probab=95.59 E-value=0.013 Score=43.67 Aligned_cols=37 Identities=14% Similarity=0.116 Sum_probs=33.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcch
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN 135 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~ 135 (306)
..++|+|.|| |++|.+++..|.+.|.+|+++.|...-
T Consensus 29 ~~k~vvViGg-G~iG~E~A~~l~~~g~~Vtlie~~~~~ 65 (123)
T d1nhpa2 29 EVNNVVVIGS-GYIGIEAAEAFAKAGKKVTVIDILDRP 65 (123)
T ss_dssp TCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSST
T ss_pred CCCEEEEECC-hHHHHHHHHHhhccceEEEEEEecCcc
Confidence 3689999998 999999999999999999999887643
|
| >d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=95.58 E-value=0.02 Score=43.72 Aligned_cols=33 Identities=12% Similarity=0.177 Sum_probs=26.8
Q ss_pred eEEEEcCCChHHHHHHHHHHHC-CCeEEEEecCc
Q 021854 101 AVLVTDGDSDIGQMVILSLIVK-RTRIKALVKDK 133 (306)
Q Consensus 101 ~ilVtGatG~iG~~l~~~L~~~-g~~V~~l~R~~ 133 (306)
||.|.||+|.+|+.+++.+.+. ++++.+.....
T Consensus 1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~ 34 (135)
T d1yl7a1 1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELDAG 34 (135)
T ss_dssp EEEEETTTSHHHHHHHHHHHHSTTSEEEEEECTT
T ss_pred CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecC
Confidence 6899999999999999988764 57887765443
|
| >d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=95.56 E-value=0.0018 Score=50.79 Aligned_cols=25 Identities=20% Similarity=0.276 Sum_probs=22.6
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCC
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKR 123 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g 123 (306)
.++|.|+||+|.+|+.++..|+..+
T Consensus 4 p~KV~IiGA~G~VG~~~a~~l~~~~ 28 (154)
T d1y7ta1 4 PVRVAVTGAAGQIGYSLLFRIAAGE 28 (154)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTTT
T ss_pred CCEEEEECCCCHHHHHHHHHHHhcc
Confidence 5699999999999999999998765
|
| >d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Frog (Rana perezi) [TaxId: 8403]
Probab=95.50 E-value=0.029 Score=44.33 Aligned_cols=94 Identities=15% Similarity=0.087 Sum_probs=58.1
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEecCcchhh--hhcCCCceeeeccCCC--HHHHHHHh--cCccEEEE
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAM--ESFGTYVESMAGDASN--KKFLKTAL--RGVRSIIC 169 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~l~R~~~~~~--~~~~~~v~~v~~D~~d--~~~l~~~~--~~~d~vi~ 169 (306)
.++.+|+|.|+ |++|...++.+...|+ +|+++.+++++++ ..++. ..++...-.| .+...... .++|++|-
T Consensus 26 ~~G~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~~lGa-~~~i~~~~~d~~~~~~~~~~~~~G~d~vid 103 (174)
T d1p0fa2 26 TPGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGA-TECLNPKDYDKPIYEVICEKTNGGVDYAVE 103 (174)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTC-SEEECGGGCSSCHHHHHHHHTTSCBSEEEE
T ss_pred CCCCEEEEECC-CchhHHHHHHHHHcCCceeeccCChHHHHHHHHHcCC-cEEEcCCCchhHHHHHHHHhcCCCCcEEEE
Confidence 35789999997 9999999999999996 7888888887743 23332 1222211122 23333333 47899998
Q ss_pred cCCch--hhhccc--ccCCCEEEEecC
Q 021854 170 PSEGF--ISNAGS--LKGVQHVILLSQ 192 (306)
Q Consensus 170 ~~~g~--~~~~a~--~~gvkr~V~iSS 192 (306)
++++. ..+... ..+-.++|++.-
T Consensus 104 ~~g~~~~~~~~~~~~~~~~G~~v~vG~ 130 (174)
T d1p0fa2 104 CAGRIETMMNALQSTYCGSGVTVVLGL 130 (174)
T ss_dssp CSCCHHHHHHHHHTBCTTTCEEEECCC
T ss_pred cCCCchHHHHHHHHHHHhcCceEEEEE
Confidence 75543 233332 233457887764
|
| >d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Escherichia coli [TaxId: 562]
Probab=95.38 E-value=0.013 Score=43.25 Aligned_cols=37 Identities=11% Similarity=-0.072 Sum_probs=33.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcch
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN 135 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~ 135 (306)
..++|+|.|| |++|.+++..|.+.|.+|+++.|...-
T Consensus 20 ~p~~vvIiGg-G~ig~E~A~~l~~~G~~Vtlve~~~~~ 56 (116)
T d1gesa2 20 LPERVAVVGA-GYIGVELGGVINGLGAKTHLFEMFDAP 56 (116)
T ss_dssp CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCCEEEEECC-ChhhHHHHHHhhccccEEEEEeecchh
Confidence 3589999999 999999999999999999999887743
|
| >d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Plasmodium falciparum [TaxId: 5833]
Probab=95.35 E-value=0.011 Score=43.93 Aligned_cols=35 Identities=9% Similarity=0.031 Sum_probs=32.6
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcc
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR 134 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~ 134 (306)
.++|+|.|| |++|-+++..|.+.|.+|+++.|...
T Consensus 22 p~~v~IiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~~ 56 (117)
T d1onfa2 22 SKKIGIVGS-GYIAVELINVIKRLGIDSYIFARGNR 56 (117)
T ss_dssp CSEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSSS
T ss_pred CCEEEEECC-chHHHHHHHHHHhccccceeeehhcc
Confidence 589999999 99999999999999999999998774
|
| >d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]
Probab=95.35 E-value=0.029 Score=43.11 Aligned_cols=65 Identities=11% Similarity=0.107 Sum_probs=43.9
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCC--eEEEEecCcchhhhh---------cCCCceeeeccCCCHHHHHHHhcCccEEE
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVKRT--RIKALVKDKRNAMES---------FGTYVESMAGDASNKKFLKTALRGVRSII 168 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~g~--~V~~l~R~~~~~~~~---------~~~~v~~v~~D~~d~~~l~~~~~~~d~vi 168 (306)
.+|.|+|| |.+|+.++..|+.++. +++++.++++++... +.....+... .++ +.++++|+||
T Consensus 2 ~Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a~~~~~~~~i~~~--~~~----~~~~daDvVV 74 (143)
T d1llda1 2 TKLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGS--DDP----EICRDADMVV 74 (143)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEE--SCG----GGGTTCSEEE
T ss_pred CEEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhccccCCCceeecC--CCH----HHhhCCcEEE
Confidence 57999997 9999999999999884 788888887653211 1122222222 222 2377889998
Q ss_pred EcC
Q 021854 169 CPS 171 (306)
Q Consensus 169 ~~~ 171 (306)
.++
T Consensus 75 ita 77 (143)
T d1llda1 75 ITA 77 (143)
T ss_dssp ECC
T ss_pred Eec
Confidence 873
|
| >d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Phosphoglycerate dehydrogenase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=95.33 E-value=0.0089 Score=48.09 Aligned_cols=64 Identities=19% Similarity=-0.003 Sum_probs=48.0
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEc
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~ 170 (306)
..++++.|.|. |.||+++++.+...|.+|++..|...+..... ..++ ..+++++++.+|+|+.+
T Consensus 42 l~~k~vgiiG~-G~IG~~va~~~~~fg~~v~~~d~~~~~~~~~~-~~~~--------~~~l~ell~~sDiv~~~ 105 (184)
T d1ygya1 42 IFGKTVGVVGL-GRIGQLVAQRIAAFGAYVVAYDPYVSPARAAQ-LGIE--------LLSLDDLLARADFISVH 105 (184)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECTTSCHHHHHH-HTCE--------ECCHHHHHHHCSEEEEC
T ss_pred ccceeeeeccc-cchhHHHHHHhhhccceEEeecCCCChhHHhh-cCce--------eccHHHHHhhCCEEEEc
Confidence 35799999997 99999999999999999999988765432211 1122 12467789999999865
|
| >d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=95.28 E-value=0.013 Score=43.16 Aligned_cols=36 Identities=14% Similarity=0.195 Sum_probs=32.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcc
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR 134 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~ 134 (306)
.+++++|.|| |++|-+++..|.+.|.+|+++.|.+.
T Consensus 20 ~p~~vvIiGg-G~~G~E~A~~l~~~g~~Vtlve~~~~ 55 (115)
T d1lvla2 20 LPQHLVVVGG-GYIGLELGIAYRKLGAQVSVVEARER 55 (115)
T ss_dssp CCSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred CCCeEEEECC-CHHHHHHHHHHhhcccceEEEeeecc
Confidence 4589999999 99999999999999999999988764
|
| >d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=95.27 E-value=0.015 Score=45.67 Aligned_cols=74 Identities=19% Similarity=0.158 Sum_probs=45.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEecCcchhh--hhcCCCceeeec-cC-CCHHHHHHHh--cCccEEEEc
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAM--ESFGTYVESMAG-DA-SNKKFLKTAL--RGVRSIICP 170 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~l~R~~~~~~--~~~~~~v~~v~~-D~-~d~~~l~~~~--~~~d~vi~~ 170 (306)
++.+|+|.|+ |++|...++.+...|. .|++..+++++.+ ..++.. +++.. +- .+.....+.. .++|++|.+
T Consensus 28 ~G~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~~k~~~ak~lGa~-~~i~~~~~~~~~~~~~~~~~~~g~D~vid~ 105 (176)
T d2fzwa2 28 PGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGAT-ECINPQDFSKPIQEVLIEMTDGGVDYSFEC 105 (176)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTCS-EEECGGGCSSCHHHHHHHHTTSCBSEEEEC
T ss_pred CCCEEEEecc-hhHHHHHHHHHHHHhcCceEEEcccHHHHHHHHHhCCc-EEEeCCchhhHHHHHHHHHcCCCCcEeeec
Confidence 4789999998 6899999999988996 5666666666632 234421 22221 11 2222222222 478999988
Q ss_pred CCc
Q 021854 171 SEG 173 (306)
Q Consensus 171 ~~g 173 (306)
.++
T Consensus 106 ~G~ 108 (176)
T d2fzwa2 106 IGN 108 (176)
T ss_dssp SCC
T ss_pred CCC
Confidence 553
|
| >d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: 2,4-dienoyl-CoA reductase species: Yeast (Candida tropicalis) [TaxId: 5482]
Probab=95.25 E-value=0.017 Score=46.21 Aligned_cols=96 Identities=11% Similarity=0.108 Sum_probs=56.3
Q ss_pred CCCeEEE-EcCCChHHHHHHHHHHHCCCeEEEEecCcchhhh------hcCCCceeeec---cCCCH-HHHHHH----hc
Q 021854 98 ARDAVLV-TDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAG---DASNK-KFLKTA----LR 162 (306)
Q Consensus 98 ~~~~ilV-tGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~------~~~~~v~~v~~---D~~d~-~~l~~~----~~ 162 (306)
++.+++| +||+|.+|...++-....|++|++++|+.++.++ .++. -.++.. |..+. +.+.+. -.
T Consensus 28 ~g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~~~~~~lGa-d~vi~~~~~~~~~~~~~v~~~~~~~g~ 106 (189)
T d1gu7a2 28 PGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGA-TQVITEDQNNSREFGPTIKEWIKQSGG 106 (189)
T ss_dssp TTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTC-SEEEEHHHHHCGGGHHHHHHHHHHHTC
T ss_pred CCCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccchHHhhhhhccc-cEEEeccccchhHHHHHHHHHHhhccC
Confidence 3566666 6999999999998888899999999988765322 2231 122222 22221 223332 24
Q ss_pred CccEEEEcCCchhh-hcccc-cCCCEEEEecCcc
Q 021854 163 GVRSIICPSEGFIS-NAGSL-KGVQHVILLSQLS 194 (306)
Q Consensus 163 ~~d~vi~~~~g~~~-~~a~~-~gvkr~V~iSS~~ 194 (306)
++|++|.+.++... ..... ..-.++|.++...
T Consensus 107 ~vdvv~D~vg~~~~~~~~~~l~~~G~~v~~G~~~ 140 (189)
T d1gu7a2 107 EAKLALNCVGGKSSTGIARKLNNNGLMLTYGGMS 140 (189)
T ss_dssp CEEEEEESSCHHHHHHHHHTSCTTCEEEECCCCS
T ss_pred CceEEEECCCcchhhhhhhhhcCCcEEEEECCcc
Confidence 68999987554322 11111 2335888876544
|
| >d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-2-hydroxyisocaproate dehydrogenase species: Lactobacillus casei [TaxId: 1582]
Probab=95.23 E-value=0.0087 Score=48.80 Aligned_cols=62 Identities=15% Similarity=0.007 Sum_probs=47.0
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEc
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~ 170 (306)
..+++|.|.|. |.||+.+++.|...|++|++..+...... ...+. ..+++++++.+|+|++.
T Consensus 43 l~~ktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~---~~~~~--------~~~l~~l~~~~D~v~~~ 104 (199)
T d1dxya1 43 LGQQTVGVMGT-GHIGQVAIKLFKGFGAKVIAYDPYPMKGD---HPDFD--------YVSLEDLFKQSDVIDLH 104 (199)
T ss_dssp GGGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCSSC---CTTCE--------ECCHHHHHHHCSEEEEC
T ss_pred ccceeeeeeec-ccccccccccccccceeeeccCCccchhh---hcchh--------HHHHHHHHHhcccceee
Confidence 35799999998 99999999999999999999987654321 11111 23467788889999866
|
| >d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.22 E-value=0.016 Score=43.23 Aligned_cols=35 Identities=6% Similarity=0.099 Sum_probs=32.7
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcc
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR 134 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~ 134 (306)
.++++|.|| |+||-+++..|.+.|.+|+++.|...
T Consensus 22 pk~vvIvGg-G~iG~E~A~~l~~~G~~Vtlv~~~~~ 56 (125)
T d3grsa2 22 PGRSVIVGA-GYIAVEMAGILSALGSKTSLMIRHDK 56 (125)
T ss_dssp CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCEEEEEcC-CccHHHHHHHHhcCCcEEEEEeeccc
Confidence 589999999 99999999999999999999999774
|
| >d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=95.13 E-value=0.029 Score=44.53 Aligned_cols=94 Identities=19% Similarity=0.148 Sum_probs=57.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCC-CeEEEEecCcch--hhhhcCCCceeeeccCC-----------CHHHHHHHhcC
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRN--AMESFGTYVESMAGDAS-----------NKKFLKTALRG 163 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~l~R~~~~--~~~~~~~~v~~v~~D~~-----------d~~~l~~~~~~ 163 (306)
|..+|.|-|- |.||+.+++.+..+. .+|+++...... .......++..+..+.. ....+..++++
T Consensus 1 M~irIaINGf-GRIGR~v~Ral~~~~dieiVaINd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (172)
T d2czca2 1 MKVKVGVNGY-GTIGKRVAYAVTKQDDMELIGITKTKPDFEAYRAKELGIPVYAASEEFIPRFEKEGFEVAGTLNDLLEK 79 (172)
T ss_dssp CCEEEEEECC-SHHHHHHHHHHHTCTTEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHHTCCCSCBHHHHHTT
T ss_pred CcEEEEEECC-CHHHHHHHHHHHhCCCceEEEEecCCChHHHHHhhhcCceeecccccceeeecccCccccchhhhhhcc
Confidence 5689999997 999999999998755 688888754322 11111112222222221 12245556779
Q ss_pred ccEEEEcCCchhh----hcccccCCCEEEEecCc
Q 021854 164 VRSIICPSEGFIS----NAGSLKGVQHVILLSQL 193 (306)
Q Consensus 164 ~d~vi~~~~g~~~----~~a~~~gvkr~V~iSS~ 193 (306)
+|+|+-|++.+.. ..-.++|+| .|++|+.
T Consensus 80 vDvViEcTG~f~~~~~~~~hl~~G~k-~Vi~s~~ 112 (172)
T d2czca2 80 VDIIVDATPGGIGAKNKPLYEKAGVK-AIFQGGE 112 (172)
T ss_dssp CSEEEECCSTTHHHHHHHHHHHHTCE-EEECTTS
T ss_pred CCEEEECCCCCCCHHHHHHHHHcCCC-EEEECCC
Confidence 9999988887642 222357875 5556654
|
| >d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: 6-phosphogluconate dehydrogenase species: Trypanosoma brucei [TaxId: 5691]
Probab=95.11 E-value=0.026 Score=44.52 Aligned_cols=70 Identities=11% Similarity=0.057 Sum_probs=49.0
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcC----CCceeeeccCCCHHHHHHHhcCccEEEEc
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG----TYVESMAGDASNKKFLKTALRGVRSIICP 170 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~----~~v~~v~~D~~d~~~l~~~~~~~d~vi~~ 170 (306)
|+|.|.|- |.+|..+++.|++.||+|.+..|++++..+... .....-.-...+.+.+...+...+.++.+
T Consensus 2 MkIGvIGl-G~MG~~ma~~L~~~G~~V~~~dr~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (178)
T d1pgja2 2 MDVGVVGL-GVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKANASAPFAGNLKAFETMEAFAASLKKPRKALIL 75 (178)
T ss_dssp BSEEEECC-SHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSTTGGGEEECSCHHHHHHHBCSSCEEEEC
T ss_pred CEEEEEee-hHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCCccccccchhhhhhhhHHHHhcccceEEEEe
Confidence 67999987 999999999999999999999999988544321 11111111234556666677777666654
|
| >d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-glycerate dehydrogenase species: Hyphomicrobium methylovorum [TaxId: 84]
Probab=95.09 E-value=0.011 Score=47.94 Aligned_cols=67 Identities=10% Similarity=-0.008 Sum_probs=48.7
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEc
Q 021854 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (306)
Q Consensus 96 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~ 170 (306)
+..++++.|.|. |.||+.+++.+...|++|....+........... .....++++++++.+|+|+..
T Consensus 44 ~l~g~tvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~~-------~~~~~~~l~~ll~~sD~v~l~ 110 (191)
T d1gdha1 44 KLDNKTLGIYGF-GSIGQALAKRAQGFDMDIDYFDTHRASSSDEASY-------QATFHDSLDSLLSVSQFFSLN 110 (191)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSCCCHHHHHHH-------TCEECSSHHHHHHHCSEEEEC
T ss_pred eecccceEEeec-ccchHHHHHHHHhhccccccccccccccchhhcc-------cccccCCHHHHHhhCCeEEec
Confidence 345799999998 9999999999999999999988765432211110 011124577889999999865
|
| >d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH oxidase /nitrite reductase species: Pyrococcus furiosus [TaxId: 2261]
Probab=95.04 E-value=0.014 Score=43.32 Aligned_cols=34 Identities=15% Similarity=0.191 Sum_probs=31.6
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCc
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK 133 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~ 133 (306)
.++++|.|| |++|-+++..|.+.|++|+++.|.+
T Consensus 32 ~~~vvIiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~ 65 (122)
T d1xhca2 32 SGEAIIIGG-GFIGLELAGNLAEAGYHVKLIHRGA 65 (122)
T ss_dssp HSEEEEEEC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CCcEEEECC-cHHHHHHHHHhhcccceEEEEeccc
Confidence 478999999 9999999999999999999998876
|
| >d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Garden pea (Pisum sativum) [TaxId: 3888]
Probab=95.01 E-value=0.012 Score=43.94 Aligned_cols=39 Identities=10% Similarity=-0.025 Sum_probs=35.0
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcch
Q 021854 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN 135 (306)
Q Consensus 96 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~ 135 (306)
...+++++|.|| |+||-+++..|.+.|.+|+++.|....
T Consensus 22 ~~~p~~~viiG~-G~iglE~A~~~~~~G~~Vtvi~~~~~~ 60 (123)
T d1dxla2 22 SEIPKKLVVIGA-GYIGLEMGSVWGRIGSEVTVVEFASEI 60 (123)
T ss_dssp SSCCSEEEESCC-SHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred cccCCeEEEEcc-chHHHHHHHHHHhcCCeEEEEEEcccc
Confidence 345689999999 999999999999999999999998854
|
| >d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: S-adenosylhomocystein hydrolase species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]
Probab=94.96 E-value=0.031 Score=43.87 Aligned_cols=69 Identities=13% Similarity=0.038 Sum_probs=55.1
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcCCch
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEGF 174 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~g~ 174 (306)
..+|+++|.|- |.+|+-+++.|...|.+|++.-.++-++.+..-+++++. .++++++..|++|.+++..
T Consensus 21 laGk~vvV~GY-G~vGrG~A~~~rg~Ga~V~V~E~DPi~alqA~mdGf~v~--------~~~~a~~~aDi~vTaTGn~ 89 (163)
T d1v8ba1 21 ISGKIVVICGY-GDVGKGCASSMKGLGARVYITEIDPICAIQAVMEGFNVV--------TLDEIVDKGDFFITCTGNV 89 (163)
T ss_dssp CTTSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHTTTCEEC--------CHHHHTTTCSEEEECCSSS
T ss_pred ecCCEEEEecc-cccchhHHHHHHhCCCEEEEEecCchhhHHHHhcCCccC--------chhHccccCcEEEEcCCCC
Confidence 45899999999 999999999999999999999999866544433444432 3467889999999986653
|
| >d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Formate dehydrogenase species: Pseudomonas sp., strain 101 [TaxId: 306]
Probab=94.94 E-value=0.014 Score=46.91 Aligned_cols=66 Identities=8% Similarity=-0.098 Sum_probs=48.2
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEc
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~ 170 (306)
..++++.|.|. |.||+++++.|...|.+|....|...........+ +....+++++++.+|+|+..
T Consensus 42 l~~~~vgiiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~~~-------~~~~~~l~~~l~~sD~v~~~ 107 (188)
T d2naca1 42 LEAMHVGTVAA-GRIGLAVLRRLAPFDVHLHYTDRHRLPESVEKELN-------LTWHATREDMYPVCDVVTLN 107 (188)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHGGGTCEEEEECSSCCCHHHHHHHT-------CEECSSHHHHGGGCSEEEEC
T ss_pred ccccceeeccc-cccchhhhhhhhccCceEEEEeecccccccccccc-------ccccCCHHHHHHhccchhhc
Confidence 45799999998 99999999999999999999988654321111101 12234567789999999865
|
| >d2dt5a2 c.2.1.12 (A:78-203) Transcriptional repressor Rex, C-terminal domain {Thermus aquaticus [TaxId: 271]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Transcriptional repressor Rex, C-terminal domain domain: Transcriptional repressor Rex, C-terminal domain species: Thermus aquaticus [TaxId: 271]
Probab=94.85 E-value=0.017 Score=43.45 Aligned_cols=91 Identities=3% Similarity=-0.033 Sum_probs=59.7
Q ss_pred CCeEEEEcCCChHHHHHHHHHHH-CCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhc-CccEEEEcCCch--
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIV-KRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR-GVRSIICPSEGF-- 174 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~-~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~-~~d~vi~~~~g~-- 174 (306)
..+|+|.|| |.+|+++++.+.. .+++++++.++..+.....-.+++++.. +.+.+..+ .++.++.+.+..
T Consensus 3 ~~~v~I~Ga-G~~G~~l~~~l~~~~~~~iv~fiDdd~~k~G~~I~Gi~V~~~-----~~l~~~~~~~i~iai~~i~~~~~ 76 (126)
T d2dt5a2 3 KWGLCIVGM-GRLGSALADYPGFGESFELRGFFDVDPEKVGRPVRGGVIEHV-----DLLPQRVPGRIEIALLTVPREAA 76 (126)
T ss_dssp CEEEEEECC-SHHHHHHHHCSCCCSSEEEEEEEESCTTTTTCEETTEEEEEG-----GGHHHHSTTTCCEEEECSCHHHH
T ss_pred CceEEEEcC-CHHHHHHHHhHhhcCCcEEEEEEeCchHhcCCEECCEEEecH-----HHHHHHHhhcccEEEEeCCHHHH
Confidence 348999999 9999999987753 5689999887665433222235665532 23444443 456666654432
Q ss_pred --hhhcccccCCCEEEEecCccc
Q 021854 175 --ISNAGSLKGVQHVILLSQLSV 195 (306)
Q Consensus 175 --~~~~a~~~gvkr~V~iSS~~~ 195 (306)
+.+.+.+.|++.+..++....
T Consensus 77 ~~I~d~l~~~gIk~I~~f~~~~l 99 (126)
T d2dt5a2 77 QKAADLLVAAGIKGILNFAPVVL 99 (126)
T ss_dssp HHHHHHHHHHTCCEEEECSSSCC
T ss_pred HHHHHHHHHcCCCEEeecCceee
Confidence 556677889998888766544
|
| >d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase species: Xanthobacter sp., py2 [TaxId: 35809]
Probab=94.83 E-value=0.024 Score=41.71 Aligned_cols=36 Identities=19% Similarity=0.143 Sum_probs=33.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcc
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR 134 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~ 134 (306)
++++|+|.|| |.+|.+++..|.+.|.+|.++.|.+.
T Consensus 21 ~~~~vvVvGg-G~ig~E~A~~l~~~g~~vt~i~~~~~ 56 (121)
T d1mo9a2 21 PGSTVVVVGG-SKTAVEYGCFFNATGRRTVMLVRTEP 56 (121)
T ss_dssp CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCT
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhcchhheEeeccch
Confidence 4689999999 99999999999999999999998764
|
| >d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Ubiquitin activating enzymes (UBA) domain: UBA3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.79 E-value=0.0026 Score=58.28 Aligned_cols=74 Identities=19% Similarity=0.189 Sum_probs=48.9
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEecCcch----------------------hhh---hcCC--Cceeee
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRN----------------------AME---SFGT--YVESMA 148 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~l~R~~~~----------------------~~~---~~~~--~v~~v~ 148 (306)
....+|||.|+ |++|.++++.|+..|. ++.++..+.=. +.+ ...+ ++..+.
T Consensus 35 l~~~kVlvvG~-GglG~ei~k~L~~~Gvg~i~lvD~D~Ve~sNL~RQflf~~~diG~~Ka~~a~~~l~~~np~v~i~~~~ 113 (426)
T d1yovb1 35 LDTCKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNCNVVPHF 113 (426)
T ss_dssp HHHCCEEEECS-STTHHHHHHHHHTTTCCCEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHSTTCCCEEEC
T ss_pred HhcCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEECCCcchhhhcccccCChhHcCcHHHHHHHHHHHhhCCCCceEeee
Confidence 45689999999 7799999999999997 77777543310 000 1122 344444
Q ss_pred ccCCCHHHHHHHhcCccEEEEcCCc
Q 021854 149 GDASNKKFLKTALRGVRSIICPSEG 173 (306)
Q Consensus 149 ~D~~d~~~l~~~~~~~d~vi~~~~g 173 (306)
.++.+.. ...++++|+||.+...
T Consensus 114 ~~i~~~~--~~~~~~~DlVi~~~Dn 136 (426)
T d1yovb1 114 NKIQDFN--DTFYRQFHIIVCGLDS 136 (426)
T ss_dssp SCGGGBC--HHHHTTCSEEEECCSC
T ss_pred ccccchH--HHHHHhcchheeccCc
Confidence 4444322 4578999999988553
|
| >d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Putidaredoxin reductase species: Pseudomonas putida [TaxId: 303]
Probab=94.75 E-value=0.027 Score=42.54 Aligned_cols=37 Identities=24% Similarity=0.275 Sum_probs=33.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcch
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN 135 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~ 135 (306)
..++|+|.|| |++|-+++..|.+.|.+|.++.|...-
T Consensus 34 ~~k~v~VIGg-G~iG~E~A~~l~~~g~~Vtvie~~~~~ 70 (133)
T d1q1ra2 34 ADNRLVVIGG-GYIGLEVAATAIKANMHVTLLDTAARV 70 (133)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSST
T ss_pred cCCEEEEECC-chHHHHHHHHHHhhCcceeeeeecccc
Confidence 3689999999 999999999999999999999988754
|
| >d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=94.68 E-value=0.071 Score=41.13 Aligned_cols=36 Identities=11% Similarity=0.162 Sum_probs=29.8
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCC-CeEEEEecCcch
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRN 135 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~l~R~~~~ 135 (306)
+.||.|.|+ |.+|+.++..|...+ .++.++.++.++
T Consensus 3 ~~KI~IIGa-G~VG~~~a~~l~~~~l~el~L~Di~~~~ 39 (150)
T d1t2da1 3 KAKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNM 39 (150)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSH
T ss_pred CCeEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccCCc
Confidence 679999997 999999998777776 488888877765
|
| >d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: D-aminoacid oxidase, N-terminal domain domain: D-aminoacid oxidase, N-terminal domain species: Rhodotorula gracilis [TaxId: 5286]
Probab=94.64 E-value=0.025 Score=46.11 Aligned_cols=35 Identities=26% Similarity=0.282 Sum_probs=32.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCc
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK 133 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~ 133 (306)
..++|+|.|| |-.|...+..|+++|++|+++.|+.
T Consensus 5 ~~~kVvVIGa-GiaGl~~A~~L~~~G~~V~vier~~ 39 (268)
T d1c0pa1 5 SQKRVVVLGS-GVIGLSSALILARKGYSVHILARDL 39 (268)
T ss_dssp CSCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCcEEEECc-cHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 4579999999 9999999999999999999999864
|
| >d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: 2,4-dienoyl-CoA reductase, middle domain species: Escherichia coli [TaxId: 562]
Probab=94.61 E-value=0.035 Score=44.26 Aligned_cols=39 Identities=8% Similarity=0.188 Sum_probs=34.7
Q ss_pred CccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcc
Q 021854 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR 134 (306)
Q Consensus 95 ~~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~ 134 (306)
.....++|+|.|| |..|.+.+..|+++||+|+++-++..
T Consensus 39 ~~~~~k~V~IIGa-GPAGL~AA~~la~~G~~Vtl~E~~~~ 77 (179)
T d1ps9a3 39 PAVQKKNLAVVGA-GPAGLAFAINAAARGHQVTLFDAHSE 77 (179)
T ss_dssp SCSSCCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred CCCCCcEEEEECc-cHHHHHHHHHHHhhccceEEEeccCc
Confidence 3445799999999 99999999999999999999988764
|
| >d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Acetate-CoA ligase alpha chain, AcdA, N-terminal domain species: Pyrococcus horikoshii [TaxId: 53953]
Probab=94.59 E-value=0.015 Score=44.03 Aligned_cols=85 Identities=14% Similarity=0.163 Sum_probs=57.6
Q ss_pred CCCeEEEEcCC---ChHHHHHHHHHHHCC-CeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcCCc
Q 021854 98 ARDAVLVTDGD---SDIGQMVILSLIVKR-TRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG 173 (306)
Q Consensus 98 ~~~~ilVtGat---G~iG~~l~~~L~~~g-~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~g 173 (306)
..++|+|.||+ +..|..+.+.|.+.| ++|+.+....+.. .+ ++++ -++.| +=..+|.++.+.+.
T Consensus 7 ~PksIAVVGaS~~~~~~g~~v~~~L~~~~~g~v~pVnP~~~~i---~G--~~~y-~sl~d------lp~~vDlvvi~vp~ 74 (129)
T d2csua1 7 NPKGIAVIGASNDPKKLGYEVFKNLKEYKKGKVYPVNIKEEEV---QG--VKAY-KSVKD------IPDEIDLAIIVVPK 74 (129)
T ss_dssp SCSEEEEETCCSCTTSHHHHHHHHHTTCCSSEEEEECSSCSEE---TT--EECB-SSTTS------CSSCCSEEEECSCH
T ss_pred CCCeEEEEccCCCCCCcHHHHHHHHHHcCCCcEEEeccCcccc---CC--eEee-cchhh------cCCCCceEEEecCh
Confidence 46899999998 889999999998766 6888886554322 11 2211 23333 22357999988443
Q ss_pred -h---hhhcccccCCCEEEEecCcc
Q 021854 174 -F---ISNAGSLKGVQHVILLSQLS 194 (306)
Q Consensus 174 -~---~~~~a~~~gvkr~V~iSS~~ 194 (306)
. +.+.+.+.|++.++.+|+-.
T Consensus 75 ~~~~~~~~~~~~~g~~~~vi~s~Gf 99 (129)
T d2csua1 75 RFVKDTLIQCGEKGVKGVVIITAGF 99 (129)
T ss_dssp HHHHHHHHHHHHHTCCEEEECCCSS
T ss_pred HHhHHHHHHHHHcCCCEEEEecccc
Confidence 2 44556778999999888743
|
| >d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=94.51 E-value=0.03 Score=43.37 Aligned_cols=25 Identities=24% Similarity=0.170 Sum_probs=22.2
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCC
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKR 123 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g 123 (306)
.++|.|+||+|.+|+.++..|+..+
T Consensus 3 p~KV~IiGA~G~VG~~la~~l~~~~ 27 (154)
T d5mdha1 3 PIRVLVTGAAGQIAYSLLYSIGNGS 27 (154)
T ss_dssp CEEEEESSTTSHHHHTTHHHHHTTT
T ss_pred ceEEEEECCCCHHHHHHHHHHHHHH
Confidence 4799999999999999999998654
|
| >d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Neisseria meningitidis [TaxId: 487]
Probab=94.50 E-value=0.026 Score=42.20 Aligned_cols=39 Identities=15% Similarity=0.120 Sum_probs=34.3
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcch
Q 021854 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN 135 (306)
Q Consensus 96 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~ 135 (306)
....++++|.|| |+||-+++..|.+.|.+|+++.|...-
T Consensus 23 ~~~p~~vvIiGg-G~IG~E~A~~~~~~G~~Vtive~~~~i 61 (125)
T d1ojta2 23 KEVPGKLLIIGG-GIIGLEMGTVYSTLGSRLDVVEMMDGL 61 (125)
T ss_dssp CCCCSEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred cccCCeEEEECC-CHHHHHHHHHhhcCCCEEEEEEeeccc
Confidence 334689999999 999999999999999999999887743
|
| >d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Fatty oxidation complex alpha subunit, middle domain species: Pseudomonas fragi [TaxId: 296]
Probab=94.50 E-value=0.013 Score=47.09 Aligned_cols=36 Identities=14% Similarity=0.021 Sum_probs=33.5
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcch
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN 135 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~ 135 (306)
-++|.|.|| |-+|+.++..++..|++|+++.++++.
T Consensus 4 I~~vaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~ 39 (186)
T d1wdka3 4 VKQAAVLGA-GIMGGGIAYQSASKGTPILMKDINEHG 39 (186)
T ss_dssp CSSEEEECC-HHHHHHHHHHHHHTTCCEEEECSSHHH
T ss_pred CCEEEEECc-CHHHHHHHHHHHhCCCeEEEEECCHHH
Confidence 478999999 999999999999999999999998875
|
| >d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Phosphoglycerate dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=94.42 E-value=0.024 Score=45.56 Aligned_cols=62 Identities=6% Similarity=-0.051 Sum_probs=46.9
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEc
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~ 170 (306)
..+++|.|.|. |.||+.+++.|...|.+|....+...... ... . ..+.++++++.+|+|+++
T Consensus 42 l~~~~vgiiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~----~~~--~-----~~~~l~ell~~sDii~i~ 103 (188)
T d1sc6a1 42 ARGKKLGIIGY-GHIGTQLGILAESLGMYVYFYDIENKLPL----GNA--T-----QVQHLSDLLNMSDVVSLH 103 (188)
T ss_dssp STTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCCCC----TTC--E-----ECSCHHHHHHHCSEEEEC
T ss_pred ccceEEEEeec-ccchhhhhhhcccccceEeeccccccchh----hhh--h-----hhhhHHHHHhhccceeec
Confidence 45799999987 99999999999999999999987653321 111 1 113567888899999866
|
| >d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=94.36 E-value=0.02 Score=45.41 Aligned_cols=40 Identities=10% Similarity=0.111 Sum_probs=34.5
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhh
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME 138 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~ 138 (306)
..+++|+|.|+ |+.+++++..|...| +|.++.|+.+++++
T Consensus 16 ~~~k~vlIlGa-GG~arai~~aL~~~~-~i~I~nR~~~ka~~ 55 (177)
T d1nvta1 16 VKDKNIVIYGA-GGAARAVAFELAKDN-NIIIANRTVEKAEA 55 (177)
T ss_dssp CCSCEEEEECC-SHHHHHHHHHHTSSS-EEEEECSSHHHHHH
T ss_pred cCCCEEEEECC-cHHHHHHHHHHcccc-ceeeehhhhhHHHH
Confidence 35799999998 889999999998777 99999999987543
|
| >d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Benzyl alcohol dehydrogenase species: Acinetobacter calcoaceticus [TaxId: 471]
Probab=94.26 E-value=0.1 Score=40.80 Aligned_cols=91 Identities=11% Similarity=0.125 Sum_probs=54.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEE-ecCcchhh--hhcCCCceeeeccCCCH-HHHHHHhc-CccEEEEcCC
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKAL-VKDKRNAM--ESFGTYVESMAGDASNK-KFLKTALR-GVRSIICPSE 172 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l-~R~~~~~~--~~~~~~v~~v~~D~~d~-~~l~~~~~-~~d~vi~~~~ 172 (306)
++.+|+|.|+ |.+|...++.+...|++++.+ .+++++.+ ..++. .+++..+-.|. +.+.+... ++|+||-+++
T Consensus 28 ~g~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a~~~Ga-~~~i~~~~~~~~~~i~~~t~gg~D~vid~~G 105 (174)
T d1f8fa2 28 PASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGA-THVINSKTQDPVAAIKEITDGGVNFALESTG 105 (174)
T ss_dssp TTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTC-SEEEETTTSCHHHHHHHHTTSCEEEEEECSC
T ss_pred CCCEEEEeCC-CHHHhhhhhcccccccceeeeeccHHHHHHHHHHcCC-eEEEeCCCcCHHHHHHHHcCCCCcEEEEcCC
Confidence 5789999998 999999998888888866554 55565532 33442 23333222232 33444433 5899998754
Q ss_pred ch-h-h---hcccccCCCEEEEecC
Q 021854 173 GF-I-S---NAGSLKGVQHVILLSQ 192 (306)
Q Consensus 173 g~-~-~---~~a~~~gvkr~V~iSS 192 (306)
.. . . +..+.. .++++++.
T Consensus 106 ~~~~~~~~~~~~~~~--G~i~~~G~ 128 (174)
T d1f8fa2 106 SPEILKQGVDALGIL--GKIAVVGA 128 (174)
T ss_dssp CHHHHHHHHHTEEEE--EEEEECCC
T ss_pred cHHHHHHHHhcccCc--eEEEEEee
Confidence 32 2 2 223333 47887764
|
| >d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramate-alanine ligase MurC species: Haemophilus influenzae [TaxId: 727]
Probab=94.20 E-value=0.099 Score=37.09 Aligned_cols=81 Identities=10% Similarity=0.025 Sum_probs=52.3
Q ss_pred CCCeEEEEcCCChHH-HHHHHHHHHCCCeEEEEecCcch-hhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcCC---
Q 021854 98 ARDAVLVTDGDSDIG-QMVILSLIVKRTRIKALVKDKRN-AMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE--- 172 (306)
Q Consensus 98 ~~~~ilVtGatG~iG-~~l~~~L~~~g~~V~~l~R~~~~-~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~--- 172 (306)
..++|.+.|- |++| +.+++.|.++|++|....+.... ...+...++++..++-. + .+.+.|.||..++
T Consensus 7 ~~~~ihfiGi-gG~GMs~LA~~L~~~G~~VsGSD~~~~~~~~~L~~~Gi~v~~g~~~--~----~i~~~d~vV~S~AI~~ 79 (96)
T d1p3da1 7 RVQQIHFIGI-GGAGMSGIAEILLNEGYQISGSDIADGVVTQRLAQAGAKIYIGHAE--E----HIEGASVVVVSSAIKD 79 (96)
T ss_dssp TCCEEEEETT-TSTTHHHHHHHHHHHTCEEEEEESCCSHHHHHHHHTTCEEEESCCG--G----GGTTCSEEEECTTSCT
T ss_pred hCCEEEEEEE-CHHHHHHHHHHHHhCCCEEEEEeCCCChhhhHHHHCCCeEEECCcc--c----cCCCCCEEEECCCcCC
Confidence 4689999998 5566 77899999999999999887544 22222345665554332 2 2467888887622
Q ss_pred -chhhhcccccCCC
Q 021854 173 -GFISNAGSLKGVQ 185 (306)
Q Consensus 173 -g~~~~~a~~~gvk 185 (306)
......|++.|++
T Consensus 80 ~npel~~A~~~gip 93 (96)
T d1p3da1 80 DNPELVTSKQKRIP 93 (96)
T ss_dssp TCHHHHHHHHTTCC
T ss_pred CCHHHHHHHHcCCC
Confidence 2234455666654
|
| >d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Nicotinamide nucleotide transhydrogenase dI component species: Rhodospirillum rubrum [TaxId: 1085]
Probab=94.15 E-value=0.069 Score=42.64 Aligned_cols=71 Identities=13% Similarity=-0.064 Sum_probs=51.1
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccC----------------------CCHHH
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDA----------------------SNKKF 156 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~----------------------~d~~~ 156 (306)
.-+|+|.|| |-.|..-++-....|.+|.++..+.++.+......-+++..+. ...+.
T Consensus 29 pa~VvViGa-GvaG~~Aa~~A~~lGA~V~v~D~~~~~~~~l~~l~~~~i~~~~~~~~~~~~~~gyA~~~s~~~~~~~~~~ 107 (183)
T d1l7da1 29 PARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAEA 107 (183)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHHTTCEECCC-----------------------CCHHHH
T ss_pred CcEEEEEcC-cHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHhhcceEEEeccccccccccccchhhcCHHHHHHHHHH
Confidence 579999999 9999999999999999999999888764332211112221111 12456
Q ss_pred HHHHhcCccEEEEc
Q 021854 157 LKTALRGVRSIICP 170 (306)
Q Consensus 157 l~~~~~~~d~vi~~ 170 (306)
+.+.+..+|.||.+
T Consensus 108 l~~~l~~aDlVI~t 121 (183)
T d1l7da1 108 VLKELVKTDIAITT 121 (183)
T ss_dssp HHHHHTTCSEEEEC
T ss_pred HHHHHHhhhhheee
Confidence 77788999999976
|
| >d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Molybdenum cofactor biosynthesis protein MoeB domain: Molybdenum cofactor biosynthesis protein MoeB species: Escherichia coli [TaxId: 562]
Probab=94.12 E-value=0.16 Score=41.90 Aligned_cols=92 Identities=11% Similarity=0.035 Sum_probs=59.5
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEecCcch----------------------hh---hhcCCCceeeecc
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRN----------------------AM---ESFGTYVESMAGD 150 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~l~R~~~~----------------------~~---~~~~~~v~~v~~D 150 (306)
....+|+|.|+ |++|++++..|+..|. +++++..+.=. +. ....+.+++...+
T Consensus 28 L~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~Ve~sNL~RQ~l~~~~diG~~K~~~a~~~l~~~np~~~i~~~~ 106 (247)
T d1jw9b_ 28 LKDSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVN 106 (247)
T ss_dssp HHHCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEEC
T ss_pred HhCCCEEEECC-CHHHHHHHHHHHHcCCCeEEEECCcccchhhhhhhccccHhhcCchHHHHHHHHHHHhhcccchhhhh
Confidence 45689999998 8899999999999997 56665432210 00 1112344444443
Q ss_pred CC-CHHHHHHHhcCccEEEEcCCch-----hhhcccccCCCEEEEe
Q 021854 151 AS-NKKFLKTALRGVRSIICPSEGF-----ISNAGSLKGVQHVILL 190 (306)
Q Consensus 151 ~~-d~~~l~~~~~~~d~vi~~~~g~-----~~~~a~~~gvkr~V~i 190 (306)
.. +.+.....+...|+++.+...+ +.+.+.+.+++ +|+.
T Consensus 107 ~~~~~~~~~~~~~~~divid~~d~~~~~~~in~~~~~~~ip-~i~g 151 (247)
T d1jw9b_ 107 ALLDDAELAALIAEHDLVLDCTDNVAVRNQLNAGCFAAKVP-LVSG 151 (247)
T ss_dssp SCCCHHHHHHHHHTSSEEEECCSSHHHHHHHHHHHHHHTCC-EEEE
T ss_pred hhhhhccccccccccceeeeccchhhhhhhHHHHHHHhCCC-cccc
Confidence 32 4566677788999999885543 44566677776 4443
|
| >d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Siroheme synthase N-terminal domain-like domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=94.12 E-value=0.026 Score=43.38 Aligned_cols=37 Identities=14% Similarity=0.318 Sum_probs=32.9
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCc
Q 021854 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK 133 (306)
Q Consensus 96 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~ 133 (306)
...+++|||.|| |.+|.+-++.|++.|.+|++++...
T Consensus 10 ~l~gkrvLViGg-G~va~~ka~~Ll~~GA~VtVvap~~ 46 (150)
T d1kyqa1 10 QLKDKRILLIGG-GEVGLTRLYKLMPTGCKLTLVSPDL 46 (150)
T ss_dssp CCTTCEEEEEEE-SHHHHHHHHHHGGGTCEEEEEEEEE
T ss_pred eeCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 356899999999 9999999999999999999996543
|
| >d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Aeropyrum pernix [TaxId: 56636]
Probab=94.05 E-value=0.087 Score=41.04 Aligned_cols=90 Identities=13% Similarity=0.086 Sum_probs=54.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEecCcchhhh--hcCCCceeeeccCCCHHHHHHHh--cCccEEEEcCC
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAME--SFGTYVESMAGDASNKKFLKTAL--RGVRSIICPSE 172 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~l~R~~~~~~~--~~~~~v~~v~~D~~d~~~l~~~~--~~~d~vi~~~~ 172 (306)
++.+|+|.|+ |.+|...++.+...|. .|++..+++++... .++ ..+++..+-.+.+.+.+.. +++|+||.+.+
T Consensus 32 ~g~~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~~~g-a~~~i~~~~~~~~~~~~~~~~~g~d~vid~~g 109 (172)
T d1h2ba2 32 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERLG-ADHVVDARRDPVKQVMELTRGRGVNVAMDFVG 109 (172)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHHTT-CSEEEETTSCHHHHHHHHTTTCCEEEEEESSC
T ss_pred CCCEEEEeCC-ChHHHHHHHHHHhhcCcccccccchhHHHHHHhhcc-cceeecCcccHHHHHHHhhCCCCceEEEEecC
Confidence 4689999987 9999999988888886 66666777766332 222 1233333222233344433 35899998855
Q ss_pred ch-hhh----cccccCCCEEEEec
Q 021854 173 GF-ISN----AGSLKGVQHVILLS 191 (306)
Q Consensus 173 g~-~~~----~a~~~gvkr~V~iS 191 (306)
+. ..+ .++.. .++|+++
T Consensus 110 ~~~~~~~a~~~l~~~--G~iv~~G 131 (172)
T d1h2ba2 110 SQATVDYTPYLLGRM--GRLIIVG 131 (172)
T ss_dssp CHHHHHHGGGGEEEE--EEEEECC
T ss_pred cchHHHHHHHHHhCC--CEEEEEe
Confidence 43 222 22233 4788776
|
| >d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=94.04 E-value=0.024 Score=45.34 Aligned_cols=92 Identities=11% Similarity=0.056 Sum_probs=53.6
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCC-CeEEEEecCcchhhh--h--cCCCce-------e-eeccCCCHHHHHHHhcCccE
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAME--S--FGTYVE-------S-MAGDASNKKFLKTALRGVRS 166 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~g-~~V~~l~R~~~~~~~--~--~~~~v~-------~-v~~D~~d~~~l~~~~~~~d~ 166 (306)
-+|.|.|- |.||+.++|.+..++ .+|+++......... . ....+. . -...+.-...+..++.++|+
T Consensus 2 IKVaINGf-GRIGR~v~Ral~~~~dievVaInd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~g~~~~~~~~vDi 80 (178)
T d1b7go1 2 VNVAVNGY-GTIGKRVADAIIKQPDMKLVGVAKTSPNYEAFIAHRRGIRIYVPQQSIKKFEESGIPVAGTVEDLIKTSDI 80 (178)
T ss_dssp EEEEEECC-SHHHHHHHHHHHTCTTEEEEEEECSSCSHHHHHHHHTTCCEECCGGGHHHHHTTTCCCCCCHHHHHHHCSE
T ss_pred eEEEEECC-CHHHHHHHHHHHhCCCCEEEEEECCCCcHHHHHhcccCcceeccCccceeccccceecCCchhhhhhcCCE
Confidence 37999985 999999999999865 688888765433110 0 110000 0 00011111234556678999
Q ss_pred EEEcCCchhh----hcccccCCCEEEEecCc
Q 021854 167 IICPSEGFIS----NAGSLKGVQHVILLSQL 193 (306)
Q Consensus 167 vi~~~~g~~~----~~a~~~gvkr~V~iSS~ 193 (306)
|+-|++.+.. ....++| +++|+.++.
T Consensus 81 ViecTG~f~~~e~a~~hl~~G-~KvIi~~~~ 110 (178)
T d1b7go1 81 VVDTTPNGVGAQYKPIYLQLQ-RNAIFQGGE 110 (178)
T ss_dssp EEECCSTTHHHHHHHHHHHTT-CEEEECTTS
T ss_pred EEECCCCcCCHHHHHHHHHcC-CEEEEECCC
Confidence 9988776522 2223466 577775543
|
| >d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Cod (Gadus callarias) [TaxId: 8053]
Probab=93.87 E-value=0.16 Score=39.28 Aligned_cols=74 Identities=15% Similarity=0.118 Sum_probs=47.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEecCcchhhh--hcCCCceeeec-cCC-CHHHHHHHh--cCccEEEEc
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAME--SFGTYVESMAG-DAS-NKKFLKTAL--RGVRSIICP 170 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~l~R~~~~~~~--~~~~~v~~v~~-D~~-d~~~l~~~~--~~~d~vi~~ 170 (306)
++.+|+|.|+ |.+|...+.++...|. +|+++.+++++.+. .++. .+++.. +-. ..+.+.... .++|++|-+
T Consensus 28 ~g~~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~~~GA-d~~in~~~~~~~~~~~~~~~~~~G~d~vid~ 105 (175)
T d1cdoa2 28 PGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGA-TDFVNPNDHSEPISQVLSKMTNGGVDFSLEC 105 (175)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTC-CEEECGGGCSSCHHHHHHHHHTSCBSEEEEC
T ss_pred CCCEEEEEec-CCccchHHHHHHHHhhchheeecchHHHHHHHHHcCC-cEEEcCCCcchhHHHHHHhhccCCcceeeee
Confidence 4789999997 7788888888888875 68888888877442 2332 122221 111 123333333 478999988
Q ss_pred CCc
Q 021854 171 SEG 173 (306)
Q Consensus 171 ~~g 173 (306)
.++
T Consensus 106 ~G~ 108 (175)
T d1cdoa2 106 VGN 108 (175)
T ss_dssp SCC
T ss_pred cCC
Confidence 554
|
| >d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Hypothetical protein PH1109 species: Pyrococcus horikoshii [TaxId: 53953]
Probab=93.81 E-value=0.039 Score=42.11 Aligned_cols=82 Identities=7% Similarity=0.038 Sum_probs=54.0
Q ss_pred CCCeEEEEcCC---ChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcCC-c
Q 021854 98 ARDAVLVTDGD---SDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE-G 173 (306)
Q Consensus 98 ~~~~ilVtGat---G~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~-g 173 (306)
..++|+|.||+ +..|..+++.|.+.||+|+.+....... .+ ..++ .++.++-..+|.++.+.+ .
T Consensus 18 ~~ksIAVVGaS~~~~~~g~~v~~~L~~~g~~v~pVnP~~~~i---~G--~~~~-------~sl~dlp~~iD~v~i~vp~~ 85 (139)
T d2d59a1 18 RYKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPKYEEV---LG--RKCY-------PSVLDIPDKIEVVDLFVKPK 85 (139)
T ss_dssp HCCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEE---TT--EECB-------SSGGGCSSCCSEEEECSCHH
T ss_pred cCCeEEEEeecCCCCCchHHHHHHHHHCCCEEEEECCccccc---CC--Cccc-------ccccccCccceEEEEEeCHH
Confidence 46899999998 6799999999999999998885443221 11 1111 112222345788887744 2
Q ss_pred h---hhhcccccCCCEEEEec
Q 021854 174 F---ISNAGSLKGVQHVILLS 191 (306)
Q Consensus 174 ~---~~~~a~~~gvkr~V~iS 191 (306)
. +.+.+.+.|++.+++.+
T Consensus 86 ~~~~~~~e~~~~g~k~v~~~~ 106 (139)
T d2d59a1 86 LTMEYVEQAIKKGAKVVWFQY 106 (139)
T ss_dssp HHHHHHHHHHHHTCSEEEECT
T ss_pred HHHHHHHHHHHhCCCEEEEec
Confidence 2 34445667898777644
|
| >d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Hypothetical protein PF0725 species: Pyrococcus furiosus [TaxId: 2261]
Probab=93.81 E-value=0.045 Score=40.41 Aligned_cols=79 Identities=8% Similarity=0.163 Sum_probs=51.8
Q ss_pred CeEEEEcCC---ChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcCCc-h-
Q 021854 100 DAVLVTDGD---SDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG-F- 174 (306)
Q Consensus 100 ~~ilVtGat---G~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~g-~- 174 (306)
|+|.|.||+ +..|..+++.|.+.||+|+.+....+.. . ++.++ .++.++=..+|.++.+.+. .
T Consensus 2 KsIAVvGaS~~~~k~g~~v~~~L~~~g~~V~pVnP~~~~i---~--G~~~y-------~sl~~lp~~~D~vvi~vp~~~~ 69 (116)
T d1y81a1 2 RKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYDEI---E--GLKCY-------RSVRELPKDVDVIVFVVPPKVG 69 (116)
T ss_dssp CEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEE---T--TEECB-------SSGGGSCTTCCEEEECSCHHHH
T ss_pred cEEEEEcccCCCCCcHHHHHHHHHHCCCEEEEEccccccc---c--Ccccc-------ccchhccccceEEEEEeCHHHH
Confidence 789999998 5699999999999999998885443221 1 12221 1222223457888877443 2
Q ss_pred --hhhcccccCCCEEEEe
Q 021854 175 --ISNAGSLKGVQHVILL 190 (306)
Q Consensus 175 --~~~~a~~~gvkr~V~i 190 (306)
..+.+.+.|++.+++-
T Consensus 70 ~~~l~~~~~~g~k~v~~~ 87 (116)
T d1y81a1 70 LQVAKEAVEAGFKKLWFQ 87 (116)
T ss_dssp HHHHHHHHHTTCCEEEEC
T ss_pred HHHHHHHHhcCCceEEec
Confidence 3445567889877653
|
| >d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Formaldehyde dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=93.76 E-value=0.17 Score=40.45 Aligned_cols=73 Identities=10% Similarity=-0.023 Sum_probs=46.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEecCcchhhhhcCCCceeeeccCC--C-HHHHHHHhc--CccEEEEcC
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGTYVESMAGDAS--N-KKFLKTALR--GVRSIICPS 171 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~l~R~~~~~~~~~~~~v~~v~~D~~--d-~~~l~~~~~--~~d~vi~~~ 171 (306)
++.+|+|.|| |.+|...+..+...|. +|+++.+++++++....-+...+. |.. | .+.+.+... ++|++|-+.
T Consensus 25 ~G~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a~~~Ga~~~~-~~~~~~~~~~i~~~t~g~g~D~vid~v 102 (195)
T d1kola2 25 PGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQGFEIAD-LSLDTPLHEQIAALLGEPEVDCAVDAV 102 (195)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCEEEE-TTSSSCHHHHHHHHHSSSCEEEEEECC
T ss_pred CCCEEEEECc-CHHHHHHHHHHHhhcccceeeecccchhhHhhhhccccEEE-eCCCcCHHHHHHHHhCCCCcEEEEECc
Confidence 5789999987 9999888887777886 777777877764322212233332 222 2 234455444 579988763
Q ss_pred C
Q 021854 172 E 172 (306)
Q Consensus 172 ~ 172 (306)
+
T Consensus 103 G 103 (195)
T d1kola2 103 G 103 (195)
T ss_dssp C
T ss_pred c
Confidence 3
|
| >d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Dihydropyrimidine dehydrogenase, domain 2 species: Pig (Sus scrofa) [TaxId: 9823]
Probab=93.71 E-value=0.034 Score=43.72 Aligned_cols=36 Identities=8% Similarity=-0.062 Sum_probs=32.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEecCcc
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKR 134 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~l~R~~~ 134 (306)
.++||+|.|| |..|...+.+|.++|+ +|+++-|...
T Consensus 3 ~~~kVaIIGa-GpaGl~aA~~l~~~G~~~V~v~E~~~~ 39 (196)
T d1gtea4 3 YSAKIALLGA-GPASISCASFLARLGYSDITIFEKQEY 39 (196)
T ss_dssp GGCCEEEECC-SHHHHHHHHHHHHTTCCCEEEEESSSS
T ss_pred CCCEEEEECC-hHHHHHHHHHHHHCCCCeEEEEEecCc
Confidence 3689999999 9999999999999998 5989887664
|
| >d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Escherichia coli [TaxId: 562]
Probab=93.44 E-value=0.01 Score=46.79 Aligned_cols=34 Identities=15% Similarity=0.256 Sum_probs=27.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHC-CCeEEEEec
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVK-RTRIKALVK 131 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~-g~~V~~l~R 131 (306)
...+|+|.||+|.+|+++++.+.+. ++++.+...
T Consensus 3 s~ikI~i~Ga~GrMG~~i~~~i~~~~~~~lv~~~~ 37 (162)
T d1diha1 3 ANIRVAIAGAGGRMGRQLIQAALALEGVQLGAALE 37 (162)
T ss_dssp CBEEEEETTTTSHHHHHHHHHHHHSTTEECCCEEC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEe
Confidence 3579999999999999999999875 567765543
|
| >d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Phenylalanine dehydrogenase species: Rhodococcus sp., M4 [TaxId: 1831]
Probab=93.43 E-value=0.083 Score=42.80 Aligned_cols=68 Identities=12% Similarity=0.009 Sum_probs=47.9
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHh-cCccEEEEcCCc
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTAL-RGVRSIICPSEG 173 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~-~~~d~vi~~~~g 173 (306)
..+++|+|-|- |.+|+++++.|.+.|.+|++...+..........+.+.+. .+ +++ ..+|+++-|+.+
T Consensus 25 L~gk~v~IqG~-G~VG~~~A~~L~~~Gakvvv~d~d~~~~~~~~~~g~~~~~-----~~---~~~~~~~DI~iPcA~~ 93 (201)
T d1c1da1 25 LDGLTVLVQGL-GAVGGSLASLAAEAGAQLLVADTDTERVAHAVALGHTAVA-----LE---DVLSTPCDVFAPCAMG 93 (201)
T ss_dssp STTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECC-----GG---GGGGCCCSEEEECSCS
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEecchHHHHHHHHhhcccccC-----cc---ccccccceeeeccccc
Confidence 45899999986 9999999999999999999888777664433322333321 11 234 478999866433
|
| >d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: C-terminal domain of adrenodoxin reductase-like domain: Trimethylamine dehydrogenase, C-terminal domain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=93.27 E-value=0.066 Score=40.96 Aligned_cols=40 Identities=5% Similarity=0.022 Sum_probs=32.4
Q ss_pred ccCCCeEEEEc-CCChHHHHHHHHHHHCCCeEEEEecCcch
Q 021854 96 EEARDAVLVTD-GDSDIGQMVILSLIVKRTRIKALVKDKRN 135 (306)
Q Consensus 96 ~~~~~~ilVtG-atG~iG~~l~~~L~~~g~~V~~l~R~~~~ 135 (306)
...++.++|.+ +.|+||.+++..|+++|.+|+++.+...-
T Consensus 36 ~~~~~~vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~~~~~ 76 (156)
T d1djqa2 36 KKIGKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVHLA 76 (156)
T ss_dssp SCCCSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSCTT
T ss_pred cccCCceEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcc
Confidence 34567777763 33899999999999999999999997643
|
| >d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Dihydroxypyridine hydroxylase DhpH species: Arthrobacter nicotinovorans [TaxId: 29320]
Probab=93.25 E-value=0.057 Score=44.24 Aligned_cols=36 Identities=19% Similarity=0.208 Sum_probs=32.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcc
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR 134 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~ 134 (306)
..++|+|.|| |..|..++..|+++|++|+++-|+++
T Consensus 3 ~~~kV~IiGa-G~aGl~~A~~L~~~G~~v~v~Er~~~ 38 (265)
T d2voua1 3 TTDRIAVVGG-SISGLTAALMLRDAGVDVDVYERSPQ 38 (265)
T ss_dssp CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCCcEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 4689999999 99999999999999999999987664
|
| >d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Cow (Bos taurus) [TaxId: 9913]
Probab=93.16 E-value=0.78 Score=38.94 Aligned_cols=36 Identities=11% Similarity=0.007 Sum_probs=32.6
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCc
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK 133 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~ 133 (306)
..+++|+|-|- |.+|+++++.|.+.|++|++++...
T Consensus 34 L~gktvaIqGf-GnVG~~~A~~L~e~Gakvv~vsD~~ 69 (293)
T d1hwxa1 34 FGDKTFAVQGF-GNVGLHSMRYLHRFGAKCVAVGESD 69 (293)
T ss_dssp STTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEEETT
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEEccc
Confidence 45799999998 9999999999999999999998754
|
| >d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Protoporphyrinogen oxidase species: Tobacco (Nicotiana tabacum) [TaxId: 4097]
Probab=93.15 E-value=0.05 Score=44.57 Aligned_cols=34 Identities=12% Similarity=0.125 Sum_probs=31.1
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCc
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK 133 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~ 133 (306)
+|+|+|.|| |.-|...+.+|+++|++|+++-++.
T Consensus 1 ~KkV~IIGa-G~aGL~aA~~La~~G~~V~vlE~~~ 34 (373)
T d1seza1 1 AKRVAVIGA-GVSGLAAAYKLKIHGLNVTVFEAEG 34 (373)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHTTSCEEEEECSSS
T ss_pred CCEEEEECc-CHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 489999999 9999999999999999999997654
|
| >d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: UDP-glucose dehydrogenase (UDPGDH) species: Streptococcus pyogenes [TaxId: 1314]
Probab=93.06 E-value=0.045 Score=43.73 Aligned_cols=36 Identities=8% Similarity=0.002 Sum_probs=29.9
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhh
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM 137 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~ 137 (306)
|+|.|.|. |++|..++..| +.|++|+++.-++++..
T Consensus 1 MkI~ViGl-G~vGl~~a~~~-a~g~~V~g~Din~~~v~ 36 (196)
T d1dlja2 1 MKIAVAGS-GYVGLSLGVLL-SLQNEVTIVDILPSKVD 36 (196)
T ss_dssp CEEEEECC-SHHHHHHHHHH-TTTSEEEEECSCHHHHH
T ss_pred CEEEEECC-ChhHHHHHHHH-HCCCcEEEEECCHHHHH
Confidence 68999985 99999998755 57999999988887643
|
| >d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]
Probab=93.01 E-value=0.056 Score=41.37 Aligned_cols=34 Identities=12% Similarity=0.174 Sum_probs=29.7
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCC--eEEEEecCc
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKRT--RIKALVKDK 133 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g~--~V~~l~R~~ 133 (306)
+|+|+|.|| |++|-+++..|.+.++ +|+++.+++
T Consensus 2 gkrivIvGg-G~~G~e~A~~l~~~~~~~~Vtlie~~~ 37 (186)
T d1fcda1 2 GRKVVVVGG-GTGGATAAKYIKLADPSIEVTLIEPNT 37 (186)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred CCcEEEECc-cHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence 689999999 9999999999999885 777776665
|
| >d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Diaminopimelic acid dehydrogenase (DAPDH) species: Corynebacterium glutamicum [TaxId: 1718]
Probab=92.94 E-value=0.042 Score=43.08 Aligned_cols=65 Identities=6% Similarity=0.013 Sum_probs=40.8
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHC-CCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcCCc
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVK-RTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG 173 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~-g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~g 173 (306)
+.+|.|.|+ |.+|+.+++.|.+. ++++++++......... ..... ..+......++|+|+.+++.
T Consensus 3 kirvgiiG~-G~ig~~~~~~l~~~~~~elvav~~~~~~~~~~----~~~~~-----~~~~~~~~~~~D~Vvi~tp~ 68 (170)
T d1f06a1 3 NIRVAIVGY-GNLGRSVEKLIAKQPDMDLVGIFSRRATLDTK----TPVFD-----VADVDKHADDVDVLFLCMGS 68 (170)
T ss_dssp CEEEEEECC-SHHHHHHHHHHTTCSSEEEEEEEESSSCCSSS----SCEEE-----GGGGGGTTTTCSEEEECSCT
T ss_pred cceEEEECC-hHHHHHHHHHHHhCCCcEEEEEEecccccccc----ccccc-----chhhhhhccccceEEEeCCC
Confidence 468999997 99999999999874 57888766544332111 11111 12233345678988887543
|
| >d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Trimethylamine dehydrogenase, middle domain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=92.91 E-value=0.091 Score=42.90 Aligned_cols=38 Identities=13% Similarity=0.202 Sum_probs=34.1
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcc
Q 021854 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR 134 (306)
Q Consensus 96 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~ 134 (306)
....++|+|.|| |..|...+.+|.++|++|+++.++.+
T Consensus 46 ~~~~k~VvIIGa-GpAGl~aA~~l~~~G~~v~l~E~~~~ 83 (233)
T d1djqa3 46 TKNKDSVLIVGA-GPSGSEAARVLMESGYTVHLTDTAEK 83 (233)
T ss_dssp CSSCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred ccCCceEEEEcc-cHHHHHHHHHHHHhccceeeEeeccc
Confidence 446799999999 99999999999999999999987664
|
| >d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain species: Escherichia coli [TaxId: 562]
Probab=92.86 E-value=0.085 Score=36.07 Aligned_cols=52 Identities=12% Similarity=0.024 Sum_probs=39.0
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCC
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASN 153 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d 153 (306)
.|+|.|.|+ |-+|+.++..-...|++++++.-+++.... ....+++..++.+
T Consensus 1 ~k~vgIlG~-GQLgrMl~~Aa~~LG~~v~vldp~~~~pa~--~~a~dvIT~e~E~ 52 (78)
T d3etja2 1 MKQVCVLGN-GQLGRMLRQAGEPLGIAVWPVGLDAEPAAV--PFQQSVITAEIER 52 (78)
T ss_dssp CEEEEEEBC-SHHHHHHHHHHGGGTEEEEEECTTSCGGGS--CGGGSEEEESSSC
T ss_pred CCEEEEEcC-CHHHHHHHHHHHHcCCEEEEEcCCCCCccc--ccccceEEEeecc
Confidence 378999999 999999999999999999999877654321 2234555555554
|
| >d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramate-alanine ligase MurC species: Thermotoga maritima [TaxId: 2336]
Probab=92.55 E-value=0.23 Score=34.58 Aligned_cols=79 Identities=8% Similarity=-0.054 Sum_probs=50.9
Q ss_pred CeEEEEcCCChHHH-HHHHHHHHCCCeEEEEecCcchhhh-hcCCCceeeeccCCCHHHHHHHhcCccEEEEcCC----c
Q 021854 100 DAVLVTDGDSDIGQ-MVILSLIVKRTRIKALVKDKRNAME-SFGTYVESMAGDASNKKFLKTALRGVRSIICPSE----G 173 (306)
Q Consensus 100 ~~ilVtGatG~iG~-~l~~~L~~~g~~V~~l~R~~~~~~~-~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~----g 173 (306)
|+|-+.|- |++|- .+++.|.++|+.|....+......+ +...++++..+. +.+. +++.|.||..++ .
T Consensus 2 ~~ihfiGI-gG~GMs~LA~~L~~~G~~VsGSD~~~~~~t~~L~~~Gi~i~~gh--~~~~----i~~~d~vV~SsAI~~~n 74 (89)
T d1j6ua1 2 MKIHFVGI-GGIGMSAVALHEFSNGNDVYGSNIEETERTAYLRKLGIPIFVPH--SADN----WYDPDLVIKTPAVRDDN 74 (89)
T ss_dssp CEEEEETT-TSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHTTCCEESSC--CTTS----CCCCSEEEECTTCCTTC
T ss_pred cEEEEEeE-CHHHHHHHHHHHHhCCCeEEEEeCCCChhHHHHHHCCCeEEeee--cccc----cCCCCEEEEecCcCCCC
Confidence 68889988 55665 7899999999999999887654322 223456655432 2111 467898887622 2
Q ss_pred hhhhcccccCCC
Q 021854 174 FISNAGSLKGVQ 185 (306)
Q Consensus 174 ~~~~~a~~~gvk 185 (306)
....++++.|++
T Consensus 75 pel~~A~~~gIp 86 (89)
T d1j6ua1 75 PEIVRARMERVP 86 (89)
T ss_dssp HHHHHHHHTTCC
T ss_pred HHHHHHHHcCCC
Confidence 245556666664
|
| >d1cf2o1 c.2.1.3 (O:1-138,O:304-336) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus [TaxId: 2180]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Archaeon Methanothermus fervidus [TaxId: 2180]
Probab=92.41 E-value=0.22 Score=39.03 Aligned_cols=93 Identities=12% Similarity=0.068 Sum_probs=54.7
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCC-CeEEEEecCcchh--hhhcCCCceeeecc-----------CCCHHHHHHHhcCc
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNA--MESFGTYVESMAGD-----------ASNKKFLKTALRGV 164 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~l~R~~~~~--~~~~~~~v~~v~~D-----------~~d~~~l~~~~~~~ 164 (306)
+++|.|-|- |.||+.++|.+..++ .+|+++....... ......+....... +.-...+..+++++
T Consensus 1 M~~VgINGf-GRIGR~v~R~l~~~~di~vvaInd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~g~~~~~~~~v 79 (171)
T d1cf2o1 1 MKAVAINGY-GTVGKRVADAIAQQDDMKVIGVSKTRPDFEARMALKKGYDLYVAIPERVKLFEKAGIEVAGTVDDMLDEA 79 (171)
T ss_dssp CEEEEEECC-SHHHHHHHHHHHTSSSEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHTTCCCCEEHHHHHHTC
T ss_pred CeEEEEEcC-cHHHHHHHHHHHhCCCceEEEEecCCcHHHHHHHHhcCCceEecccccceeecccCcccCCChhHhhcCC
Confidence 468999985 999999999998776 6787776544321 11111111111111 11112345567899
Q ss_pred cEEEEcCCchhh----hcccccCCCEEEEecCc
Q 021854 165 RSIICPSEGFIS----NAGSLKGVQHVILLSQL 193 (306)
Q Consensus 165 d~vi~~~~g~~~----~~a~~~gvkr~V~iSS~ 193 (306)
|+|+-|++.+.. ..-.++|+ ++|++|+.
T Consensus 80 DvViEcTG~f~~~~~~~~hl~~G~-K~vi~~~~ 111 (171)
T d1cf2o1 80 DIVIDCTPEGIGAKNLKMYKEKGI-KAIFQGGE 111 (171)
T ss_dssp SEEEECCSTTHHHHHHHHHHHTTC-EEEECTTS
T ss_pred CEEEEccCCCCCHHHHHHHHHcCC-CEEEECCC
Confidence 999988776632 12234676 56666654
|
| >d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: UDP-galactopyranose mutase, N-terminal domain domain: UDP-galactopyranose mutase, N-terminal domain species: Klebsiella pneumoniae [TaxId: 573]
Probab=92.36 E-value=0.082 Score=45.54 Aligned_cols=35 Identities=11% Similarity=0.185 Sum_probs=31.9
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcc
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR 134 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~ 134 (306)
+|+|+|.|| |.-|...|..|++.|++|+++-++..
T Consensus 2 ~KKI~IIGa-G~sGL~aA~~L~k~G~~V~viEk~~~ 36 (314)
T d2bi7a1 2 SKKILIVGA-GFSGAVIGRQLAEKGHQVHIIDQRDH 36 (314)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred CCEEEEECC-cHHHHHHHHHHHhCCCCEEEEECCCC
Confidence 689999999 99999999999999999999877664
|
| >d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase species: Zymomonas mobilis [TaxId: 542]
Probab=92.20 E-value=0.21 Score=38.43 Aligned_cols=35 Identities=20% Similarity=0.262 Sum_probs=28.6
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHC--CCeEEEEecCc
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVK--RTRIKALVKDK 133 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~--g~~V~~l~R~~ 133 (306)
+|+|.|.|+||.||...+.-+.+. .++|.+++=..
T Consensus 2 pK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~~ 38 (150)
T d1r0ka2 2 PRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANR 38 (150)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESS
T ss_pred CcEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeCC
Confidence 589999999999999998877664 48888876444
|
| >d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Glycine oxidase ThiO species: Bacillus sp. [TaxId: 1409]
Probab=91.90 E-value=0.081 Score=43.74 Aligned_cols=32 Identities=16% Similarity=0.211 Sum_probs=29.7
Q ss_pred eEEEEcCCChHHHHHHHHHHHCCCeEEEEecCc
Q 021854 101 AVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK 133 (306)
Q Consensus 101 ~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~ 133 (306)
-|+|.|| |-+|..++.+|+++|++|+++.|+.
T Consensus 6 DvvIIGa-Gi~Gls~A~~La~~G~~V~vlE~~~ 37 (276)
T d1ryia1 6 EAVVIGG-GIIGSAIAYYLAKENKNTALFESGT 37 (276)
T ss_dssp EEEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CEEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 4999999 9999999999999999999998865
|
| >d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Putidaredoxin reductase species: Pseudomonas putida [TaxId: 303]
Probab=91.86 E-value=0.091 Score=40.62 Aligned_cols=36 Identities=17% Similarity=0.088 Sum_probs=30.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcc
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR 134 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~ 134 (306)
.+++|+|.|| |.+|-+++..|.+.|++|.++.+..+
T Consensus 2 ~~~~VvIIGg-G~~G~e~A~~l~~~g~~v~v~~~~~~ 37 (185)
T d1q1ra1 2 ANDNVVIVGT-GLAGVEVAFGLRASGWEGNIRLVGDA 37 (185)
T ss_dssp CSCEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSC
T ss_pred CCCCEEEECC-cHHHHHHHHHHHHcCCceEEEEecCc
Confidence 3689999999 99999999999999988776655553
|
| >d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=91.82 E-value=0.33 Score=38.08 Aligned_cols=77 Identities=9% Similarity=0.047 Sum_probs=51.9
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCC--CceeeeccC--CCHHHHHHHhcCccEEEEcC
Q 021854 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGT--YVESMAGDA--SNKKFLKTALRGVRSIICPS 171 (306)
Q Consensus 96 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~--~v~~v~~D~--~d~~~l~~~~~~~d~vi~~~ 171 (306)
+..+|+++|.|-+.-+|+-++..|+++|..|..+..+.......... -......|+ ...+.+++....+|++|.+.
T Consensus 26 ~l~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lk~~~~~aDIvIsav 105 (171)
T d1edza1 26 RLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLKLNKHHVEDLGEYSEDLLKKCSLDSDVVITGV 105 (171)
T ss_dssp TTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSSCCCCEEEEEEECCHHHHHHHHHHCSEEEECC
T ss_pred CCCCCEEEEECCccccHHHHHHHHHHCCCEEEEeccccccccccccceeeeeeccccccccchhHHhhccccCCEEEEcc
Confidence 55689999999999999999999999999998765443221111100 001111222 34677888888999999884
Q ss_pred C
Q 021854 172 E 172 (306)
Q Consensus 172 ~ 172 (306)
+
T Consensus 106 G 106 (171)
T d1edza1 106 P 106 (171)
T ss_dssp C
T ss_pred C
Confidence 3
|
| >d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: L-aminoacid oxidase species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]
Probab=91.58 E-value=0.092 Score=43.82 Aligned_cols=35 Identities=11% Similarity=0.119 Sum_probs=31.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCc
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK 133 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~ 133 (306)
..++|+|.|| |-.|...+..|+++|++|+++-++.
T Consensus 29 ~pkkV~IIGa-G~aGLsaA~~L~~~G~~V~vlE~~~ 63 (370)
T d2iida1 29 NPKHVVIVGA-GMAGLSAAYVLAGAGHQVTVLEASE 63 (370)
T ss_dssp SCCEEEEECC-BHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 4689999999 9999999999999999999997655
|
| >d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Trypanothione reductase species: Crithidia fasciculata [TaxId: 5656]
Probab=91.25 E-value=0.17 Score=36.62 Aligned_cols=37 Identities=11% Similarity=0.036 Sum_probs=30.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHH---CCCeEEEEecCcch
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIV---KRTRIKALVKDKRN 135 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~---~g~~V~~l~R~~~~ 135 (306)
.+++++|.|| |++|-+++..|.+ .|.+|.++.|.+.-
T Consensus 17 ~p~~v~IiGg-G~ig~E~A~~l~~~~~~g~~Vtli~~~~~i 56 (117)
T d1feca2 17 APKRALCVGG-GYISIEFAGIFNAYKARGGQVDLAYRGDMI 56 (117)
T ss_dssp CCSEEEEECS-SHHHHHHHHHHHHHSCTTCEEEEEESSSSS
T ss_pred cCCeEEEECC-ChHHHHHHHHhHhhcccccccceecccccc
Confidence 4689999999 9999999976654 48899999987643
|
| >d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase species: Escherichia coli [TaxId: 562]
Probab=91.24 E-value=0.11 Score=40.22 Aligned_cols=35 Identities=20% Similarity=0.214 Sum_probs=28.6
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHC--CCeEEEEecCc
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVK--RTRIKALVKDK 133 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~--g~~V~~l~R~~ 133 (306)
+|+|.|.|+||.||...+.-+.+. .++|.+++=..
T Consensus 1 MK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~~ 37 (151)
T d1q0qa2 1 MKQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGK 37 (151)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEESS
T ss_pred CCeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEecC
Confidence 478999999999999998877765 47888886444
|
| >d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Protoporphyrinogen oxidase species: Myxococcus xanthus [TaxId: 34]
Probab=91.21 E-value=0.094 Score=42.82 Aligned_cols=33 Identities=24% Similarity=0.120 Sum_probs=30.3
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCc
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK 133 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~ 133 (306)
|+|+|.|| |.-|...+.+|.++|++|+++-++.
T Consensus 1 m~V~IIGa-G~aGL~aA~~L~~~G~~V~vlE~~~ 33 (347)
T d2ivda1 1 MNVAVVGG-GISGLAVAHHLRSRGTDAVLLESSA 33 (347)
T ss_dssp CCEEEECC-BHHHHHHHHHHHTTTCCEEEECSSS
T ss_pred CeEEEECC-CHHHHHHHHHHHhCCCCEEEEecCC
Confidence 57999999 9999999999999999999997754
|
| >d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hypothetical protein TM1727 species: Thermotoga maritima [TaxId: 2336]
Probab=91.15 E-value=0.028 Score=43.03 Aligned_cols=71 Identities=8% Similarity=0.020 Sum_probs=38.0
Q ss_pred EEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEc-CCchhhhccc
Q 021854 102 VLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP-SEGFISNAGS 180 (306)
Q Consensus 102 ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~-~~g~~~~~a~ 180 (306)
|-+.|+ |.+|+.+++.|.+.++.+.+..|++++++++..... ....+. .++++.+|+||.+ .+..+.+.+.
T Consensus 2 IgfIG~-G~mg~~l~~~L~~~~~~~~v~~R~~~~~~~l~~~~~-~~~~~~------~~~~~~~DiVil~v~d~~i~~v~~ 73 (153)
T d2i76a2 2 LNFVGT-GTLTRFFLECLKDRYEIGYILSRSIDRARNLAEVYG-GKAATL------EKHPELNGVVFVIVPDRYIKTVAN 73 (153)
T ss_dssp CEEESC-CHHHHHHHHTTC----CCCEECSSHHHHHHHHHHTC-CCCCSS------CCCCC---CEEECSCTTTHHHHHT
T ss_pred EEEEeC-cHHHHHHHHHHHhCCCEEEEEeCChhhhcchhhccc-ccccch------hhhhccCcEEEEeccchhhhHHHh
Confidence 346666 999999999886544444578999988554432111 111222 2356778999988 3333433333
|
| >d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: p-Hydroxybenzoate hydroxylase, PHBH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=90.95 E-value=0.086 Score=44.04 Aligned_cols=37 Identities=11% Similarity=0.056 Sum_probs=32.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcch
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN 135 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~ 135 (306)
|+.+|+|.|| |-.|..++..|.++|++|+++-|+++.
T Consensus 1 mk~~V~IvGa-Gp~Gl~~A~~L~~~G~~v~vlE~~~~~ 37 (292)
T d1k0ia1 1 MKTQVAIIGA-GPSGLLLGQLLHKAGIDNVILERQTPD 37 (292)
T ss_dssp CBCSEEEECC-SHHHHHHHHHHHHHTCCEEEECSSCHH
T ss_pred CCCCEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCCCC
Confidence 3458999999 899999999999999999999887643
|
| >d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Trypanothione reductase species: Trypanosoma cruzi [TaxId: 5693]
Probab=90.93 E-value=0.17 Score=36.79 Aligned_cols=36 Identities=14% Similarity=0.065 Sum_probs=29.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHH---CCCeEEEEecCcc
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIV---KRTRIKALVKDKR 134 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~---~g~~V~~l~R~~~ 134 (306)
.+++++|.|| |++|-+++..|.+ +|.+|+++.|...
T Consensus 19 ~p~~v~ivGg-G~ig~E~A~~l~~l~~~~~~Vtli~~~~~ 57 (117)
T d1aoga2 19 PPRRVLTVGG-GFISVEFAGIFNAYKPKDGQVTLCYRGEM 57 (117)
T ss_dssp CCSEEEEECS-SHHHHHHHHHHHHHCCTTCEEEEEESSSS
T ss_pred cCCeEEEECC-cHHHHHHHHHhhhcccCCcEEEEEeccch
Confidence 4689999999 9999999976654 4568999988663
|
| >d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Lysine-specific histone demethylase 1, LSD1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=90.71 E-value=0.15 Score=42.01 Aligned_cols=35 Identities=11% Similarity=0.054 Sum_probs=30.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCc
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK 133 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~ 133 (306)
+..+|+|.|| |.-|...+.+|.++|++|+++=++.
T Consensus 4 ~~~kViVIGa-G~aGL~aA~~L~~~G~~V~VlEa~~ 38 (449)
T d2dw4a2 4 KTGKVIIIGS-GVSGLAAARQLQSFGMDVTLLEARD 38 (449)
T ss_dssp CCCEEEEECC-BHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CCCcEEEECC-CHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 4678999999 9999999999999999999985543
|
| >d1iuka_ c.2.1.8 (A:) Hypothetical protein TT1466 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Hypothetical protein TT1466 species: Thermus thermophilus [TaxId: 274]
Probab=90.67 E-value=0.26 Score=37.02 Aligned_cols=103 Identities=17% Similarity=0.037 Sum_probs=61.5
Q ss_pred CCCeEEEEcCCC---hHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcCCc-
Q 021854 98 ARDAVLVTDGDS---DIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG- 173 (306)
Q Consensus 98 ~~~~ilVtGatG---~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~g- 173 (306)
..++|.|.|||. ..|..+++.|.+.||++..+.=+... .+..+ ...+ .++ .++-..+|.++.+.+.
T Consensus 12 ~pksIAVVGaS~~~~k~g~~v~~~L~~~g~~~~~v~~~~~~-~~i~g--~~~~-~~l------~~i~~~iD~v~v~~p~~ 81 (136)
T d1iuka_ 12 QAKTIAVLGAHKDPSRPAHYVPRYLREQGYRVLPVNPRFQG-EELFG--EEAV-ASL------LDLKEPVDILDVFRPPS 81 (136)
T ss_dssp HCCEEEEETCCSSTTSHHHHHHHHHHHTTCEEEEECGGGTT-SEETT--EECB-SSG------GGCCSCCSEEEECSCHH
T ss_pred CCCeEEEEeecCCCCCchHHHHHHHhcCCCCceEEEecccc-ceeec--eecc-cch------hhccCCCceEEEeccHH
Confidence 368999999985 59999999999999999877433211 11111 1111 111 1222357988887442
Q ss_pred h---hhhcccccCCCEEEEecCcccccCCCCcccccchHHHHHHHHHHHHHHhcCCCEE
Q 021854 174 F---ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMASGIPYT 229 (306)
Q Consensus 174 ~---~~~~a~~~gvkr~V~iSS~~~~~~~~~~~~~~~~~a~~~~~~aE~~l~~sgi~~t 229 (306)
. +.+.+.+.|++.+++.+.. + .+++.+..++.|++++
T Consensus 82 ~v~~~v~~~~~~g~k~i~~q~G~-----------~--------~~e~~~~a~~~Gi~vV 121 (136)
T d1iuka_ 82 ALMDHLPEVLALRPGLVWLQSGI-----------R--------HPEFEKALKEAGIPVV 121 (136)
T ss_dssp HHTTTHHHHHHHCCSCEEECTTC-----------C--------CHHHHHHHHHTTCCEE
T ss_pred HHHHHHHHHHhhCCCeEEEecCc-----------c--------CHHHHHHHHHcCCEEE
Confidence 2 3344556788877653321 1 1134456677888775
|
| >d2g82a1 c.2.1.3 (A:1-148,A:311-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermus aquaticus [TaxId: 271]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Thermus aquaticus [TaxId: 271]
Probab=90.30 E-value=0.4 Score=37.38 Aligned_cols=90 Identities=21% Similarity=0.153 Sum_probs=56.2
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcch--hhh---------hcCCCc------------eeeeccCCCHHH
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN--AME---------SFGTYV------------ESMAGDASNKKF 156 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~--~~~---------~~~~~v------------~~v~~D~~d~~~ 156 (306)
++|.|-|- |.||+.+.|.|..++.+|+++..-.+. +.- .++..+ .+....-.|++.
T Consensus 1 ikigINGf-GRIGR~~~R~l~~~~i~iv~INd~~~~~~~ayLl~yDS~hG~~~~~v~~~~~~l~i~g~~I~~~~~~~p~~ 79 (168)
T d2g82a1 1 MKVGINGF-GRIGRQVFRILHSRGVEVALINDLTDNKTLAHLLKYDSIYHRFPGEVAYDDQYLYVDGKAIRATAVKDPKE 79 (168)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSCHHHHHHHHHCCTTTCSCSSCEEECSSEEEETTEEEEEECCSSGGG
T ss_pred CEEEEECC-cHHHHHHHHHHhcCCCEEEEECCCcchhhhhheeecccccCccccccccccceeEecceeEEEEecCChHH
Confidence 47889988 999999999999999999998764422 100 011111 112223345555
Q ss_pred HHHHhcCccEEEEcCCchhh----hcccccCCCEEEEe
Q 021854 157 LKTALRGVRSIICPSEGFIS----NAGSLKGVQHVILL 190 (306)
Q Consensus 157 l~~~~~~~d~vi~~~~g~~~----~~a~~~gvkr~V~i 190 (306)
+.=.-.++|+|+-+++-+.. ..-.+.|+||+|+.
T Consensus 80 i~W~~~gvdiViEcTG~f~~~~~~~~hl~~gakkViiS 117 (168)
T d2g82a1 80 IPWAEAGVGVVIESTGVFTDADKAKAHLEGGAKKVIIT 117 (168)
T ss_dssp CCTGGGTEEEEEECSSSCCBHHHHTHHHHTTCSEEEES
T ss_pred CcccccCCceeEeccccccchHHhhhhhccccceeeec
Confidence 44334578999988775532 22234689999873
|
| >d1d7ya1 c.3.1.5 (A:5-115,A:237-308) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent ferredoxin reductase, BphA4 species: Pseudomonas sp., KKS102 [TaxId: 306]
Probab=90.21 E-value=0.075 Score=41.48 Aligned_cols=34 Identities=12% Similarity=-0.035 Sum_probs=28.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecC
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKD 132 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~ 132 (306)
|..+|+|.|| |.+|-+++.+|.+.|+++.++.+.
T Consensus 2 m~a~VvIIGg-G~~G~e~A~~l~~~g~~v~i~~~~ 35 (183)
T d1d7ya1 2 LKAPVVVLGA-GLASVSFVAELRQAGYQGLITVVG 35 (183)
T ss_dssp CCSSEEEECC-SHHHHHHHHHHHHHTCCSCEEEEE
T ss_pred CCCCEEEECc-cHHHHHHHHHHHhcCCceEEEEEe
Confidence 4667999998 999999999999999776655543
|
| >d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains species: Escherichia coli [TaxId: 562]
Probab=90.11 E-value=0.83 Score=33.50 Aligned_cols=87 Identities=11% Similarity=0.061 Sum_probs=57.1
Q ss_pred CCCeEEEEcCCC----------hHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHh--cCcc
Q 021854 98 ARDAVLVTDGDS----------DIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTAL--RGVR 165 (306)
Q Consensus 98 ~~~~ilVtGatG----------~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~--~~~d 165 (306)
..++|||.|+.. +.+...++.|.+.|++++++.-+++.....+...-+.+ ..--..+.+.+.+ +..|
T Consensus 3 ~~kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~g~~~IliN~NPeTVstd~d~aD~lY-feplt~e~v~~Ii~~E~p~ 81 (121)
T d1a9xa4 3 DREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTDYDTSDRLY-FEPVTLEDVLEIVRIEKPK 81 (121)
T ss_dssp SSCEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHTTCEEEEECCCTTSSTTSTTSSSEEE-CCCCSHHHHHHHHHHHCCS
T ss_pred CCCEEEEECCCcCcccccchhhHHHHHHHHHHHhcCCeEEEEecChhhhhcChhhcCceE-EccCCHHHHHHHHHHhCCC
Confidence 358999999943 57889999999999999999999987554333211222 2222456666654 4679
Q ss_pred EEEEcCCch-hhhcc---cccCCC
Q 021854 166 SIICPSEGF-ISNAG---SLKGVQ 185 (306)
Q Consensus 166 ~vi~~~~g~-~~~~a---~~~gvk 185 (306)
.|+...+|. ..+++ .+.|++
T Consensus 82 ~ii~~~GGQtalnla~~L~~~gv~ 105 (121)
T d1a9xa4 82 GVIVQYGGQTPLKLARALEAAGVP 105 (121)
T ss_dssp EEECSSSTHHHHTTHHHHHHTTCC
T ss_pred EEEeehhhhhHHHHHHHHHHcCCc
Confidence 998876665 23332 345654
|
| >d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Alpha-glucosidase AglA species: Thermotoga maritima [TaxId: 2336]
Probab=89.57 E-value=0.63 Score=36.15 Aligned_cols=67 Identities=7% Similarity=0.017 Sum_probs=43.5
Q ss_pred CCCeEEEEcCCChHHHH--HHHHHHHC----CCeEEEEecCcchhhh----------hcCCCceeeeccCCCHHHHHHHh
Q 021854 98 ARDAVLVTDGDSDIGQM--VILSLIVK----RTRIKALVKDKRNAME----------SFGTYVESMAGDASNKKFLKTAL 161 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~--l~~~L~~~----g~~V~~l~R~~~~~~~----------~~~~~v~~v~~D~~d~~~l~~~~ 161 (306)
+.++|.|.|| |.+|.. ++..|+.. +.+++++..++++++. .++...++... + +.++++
T Consensus 1 p~mKI~iIGa-Gsvg~t~~~~~~l~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~i~~~--t---d~~eaL 74 (171)
T d1obba1 1 PSVKIGIIGA-GSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEKT--M---NLDDVI 74 (171)
T ss_dssp CCCEEEEETT-TCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEEE--S---CHHHHH
T ss_pred CCcEEEEECC-CHHHhHHHHHHHHHhccccCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCCeEEEEe--C---Chhhcc
Confidence 3689999998 888865 44445542 3589999998876332 12222332221 2 345688
Q ss_pred cCccEEEEc
Q 021854 162 RGVRSIICP 170 (306)
Q Consensus 162 ~~~d~vi~~ 170 (306)
+++|+|++.
T Consensus 75 ~dad~Vv~~ 83 (171)
T d1obba1 75 IDADFVINT 83 (171)
T ss_dssp TTCSEEEEC
T ss_pred cCCCeEeee
Confidence 999999987
|
| >d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: GDI-like N domain domain: Guanine nucleotide dissociation inhibitor, GDI species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=89.02 E-value=0.21 Score=39.26 Aligned_cols=32 Identities=16% Similarity=0.090 Sum_probs=29.3
Q ss_pred eEEEEcCCChHHHHHHHHHHHCCCeEEEEecCc
Q 021854 101 AVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK 133 (306)
Q Consensus 101 ~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~ 133 (306)
-|+|.|| |.-|...+..|+++|++|.++-++.
T Consensus 7 DviViGa-G~~Gl~~A~~La~~G~~V~vlE~~~ 38 (297)
T d2bcgg1 7 DVIVLGT-GITECILSGLLSVDGKKVLHIDKQD 38 (297)
T ss_dssp SEEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CEEEECc-CHHHHHHHHHHHHCCCCEEEEcCCC
Confidence 3899998 9999999999999999999998875
|
| >d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: N,N-dimethylglycine oxidase species: Arthrobacter globiformis [TaxId: 1665]
Probab=89.02 E-value=0.21 Score=41.89 Aligned_cols=33 Identities=12% Similarity=0.203 Sum_probs=29.3
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCC-eEEEEecCc
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDK 133 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~g~-~V~~l~R~~ 133 (306)
.+|+|.|| |-+|..++.+|+++|. +|+++.|+.
T Consensus 2 ~dViIIGa-Gi~G~s~A~~La~~G~~~V~liE~~~ 35 (305)
T d1pj5a2 2 PRIVIIGA-GIVGTNLADELVTRGWNNITVLDQGP 35 (305)
T ss_dssp CCEEEECC-SHHHHHHHHHHHHTTCCCEEEECSSC
T ss_pred CCEEEECc-CHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence 46999999 9999999999999996 699998764
|
| >d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Human (Homo sapiens) [TaxId: 9606]
Probab=88.80 E-value=0.82 Score=35.63 Aligned_cols=37 Identities=11% Similarity=0.056 Sum_probs=32.7
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCc
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK 133 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~ 133 (306)
..+|+|+|.|.+.-+|+-++..|+++|.+|..+....
T Consensus 37 l~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t 73 (170)
T d1a4ia1 37 IAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKT 73 (170)
T ss_dssp CTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC
T ss_pred cccceEEEEecCCccchHHHHHHHhccCceEEEeccc
Confidence 4589999999999999999999999999998875544
|
| >d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Sarcosine oxidase species: Bacillus sp., strain b0618 [TaxId: 1409]
Probab=88.72 E-value=0.21 Score=41.31 Aligned_cols=32 Identities=13% Similarity=0.099 Sum_probs=29.3
Q ss_pred eEEEEcCCChHHHHHHHHHHHCCCeEEEEecCc
Q 021854 101 AVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK 133 (306)
Q Consensus 101 ~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~ 133 (306)
-|+|.|| |.+|..++.+|+++|++|+++.+..
T Consensus 5 DvvIIGa-Gi~Gls~A~~La~~G~~V~viE~~~ 36 (281)
T d2gf3a1 5 DVIVVGA-GSMGMAAGYQLAKQGVKTLLVDAFD 36 (281)
T ss_dssp EEEEECC-SHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred CEEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 3899999 9999999999999999999998754
|
| >d1m6ia2 c.3.1.5 (A:264-400) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Apoptosis-inducing factor (AIF) species: Human (Homo sapiens) [TaxId: 9606]
Probab=88.52 E-value=0.31 Score=36.32 Aligned_cols=37 Identities=19% Similarity=0.221 Sum_probs=30.9
Q ss_pred CCeEEEEcCCChHHHHHHHHHHH----CCCeEEEEecCcchh
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIV----KRTRIKALVKDKRNA 136 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~----~g~~V~~l~R~~~~~ 136 (306)
.++++|.|| |++|-+++..|.. .|.+|+++.++..-+
T Consensus 37 ~k~i~IvGg-G~~G~E~A~~l~~~~~~~g~~Vt~i~~~~~~l 77 (137)
T d1m6ia2 37 VKSITIIGG-GFLGSELACALGRKARALGTEVIQLFPEKGNM 77 (137)
T ss_dssp CSEEEEECC-SHHHHHHHHHHHHHHHHHTCEEEEECSSSSTT
T ss_pred CCEEEEECC-CHHHHHHHHHHHHHHHhcCCEEEEecccccCC
Confidence 579999999 9999999998863 588999998877543
|
| >d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Escherichia coli [TaxId: 562]
Probab=88.47 E-value=0.39 Score=37.43 Aligned_cols=53 Identities=9% Similarity=0.131 Sum_probs=41.7
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEc
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~ 170 (306)
..+|+|+|.|-+.-+|+-++..|.++|++|+.+..... .+....+.+|+||.+
T Consensus 35 l~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t~---------------------~l~~~~~~ADivI~a 87 (166)
T d1b0aa1 35 TFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTK---------------------NLRHHVENADLLIVA 87 (166)
T ss_dssp CTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCS---------------------CHHHHHHHCSEEEEC
T ss_pred cccceEEEEeccccccHHHHHHHHHhhccccccccccc---------------------hhHHHHhhhhHhhhh
Confidence 35899999999999999999999999999987643221 233456778998887
|
| >d1kifa1 c.4.1.2 (A:1-194,A:288-339) D-aminoacid oxidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: D-aminoacid oxidase, N-terminal domain domain: D-aminoacid oxidase, N-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=88.45 E-value=0.041 Score=44.49 Aligned_cols=26 Identities=19% Similarity=0.202 Sum_probs=23.9
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeE
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVKRTRI 126 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~g~~V 126 (306)
|+|+|.|| |-+|...+.+|+++|++|
T Consensus 1 mkV~VIGa-Gi~GlstA~~L~~~G~~v 26 (246)
T d1kifa1 1 MRVVVIGA-GVIGLSTALCIHERYHSV 26 (246)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHHTTT
T ss_pred CEEEEECc-hHHHHHHHHHHHHCCCCc
Confidence 68999999 999999999999999754
|
| >d1xhca1 c.3.1.5 (A:1-103,A:226-289) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH oxidase /nitrite reductase species: Pyrococcus furiosus [TaxId: 2261]
Probab=88.37 E-value=0.25 Score=37.43 Aligned_cols=31 Identities=13% Similarity=0.165 Sum_probs=27.2
Q ss_pred eEEEEcCCChHHHHHHHHHHHCCCeEEEEecCc
Q 021854 101 AVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK 133 (306)
Q Consensus 101 ~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~ 133 (306)
||+|.|| |++|-+++..|. ++.+|+++.|.+
T Consensus 2 rVvIIGg-G~~G~e~A~~l~-~~~~Vtvv~~~~ 32 (167)
T d1xhca1 2 KVVIVGN-GPGGFELAKQLS-QTYEVTVIDKEP 32 (167)
T ss_dssp EEEEECC-SHHHHHHHHHHT-TTSEEEEECSSS
T ss_pred eEEEECC-cHHHHHHHHHHH-cCCCEEEEeccc
Confidence 7999999 999999999985 578999998765
|
| >d1tlta1 c.2.1.3 (A:5-127,A:268-308) Virulence factor MviM {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Virulence factor MviM species: Escherichia coli [TaxId: 562]
Probab=88.19 E-value=0.34 Score=37.04 Aligned_cols=80 Identities=13% Similarity=0.056 Sum_probs=46.3
Q ss_pred CeEEEEcCCChHHHH-HHHHHHHC-CCeEEEEe-cCcchhhhhcCC-CceeeeccCCCHHHHHHHhcCccEEEEcCCc-h
Q 021854 100 DAVLVTDGDSDIGQM-VILSLIVK-RTRIKALV-KDKRNAMESFGT-YVESMAGDASNKKFLKTALRGVRSIICPSEG-F 174 (306)
Q Consensus 100 ~~ilVtGatG~iG~~-l~~~L~~~-g~~V~~l~-R~~~~~~~~~~~-~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~g-~ 174 (306)
.+|.|.|+ |.+|+. .++.|... ++++++++ ++.+++...... ++. +.+ .++.+.+++|+|+.+++. .
T Consensus 2 iri~iIG~-G~~g~~~~~~~l~~~~~~~i~~v~d~~~~~~~~~~~~~~~~-----~~~--~~~~l~~~~D~V~I~tp~~~ 73 (164)
T d1tlta1 2 LRIGVVGL-GGIAQKAWLPVLAAASDWTLQGAWSPTRAKALPICESWRIP-----YAD--SLSSLAASCDAVFVHSSTAS 73 (164)
T ss_dssp EEEEEECC-STHHHHTHHHHHHSCSSEEEEEEECSSCTTHHHHHHHHTCC-----BCS--SHHHHHTTCSEEEECSCTTH
T ss_pred CEEEEEcC-CHHHHHHHHHHHHhCCCcEEEEEEechhHhhhhhhhccccc-----ccc--cchhhhhhcccccccccchh
Confidence 57999996 899976 45556543 67888766 455543322110 122 222 233445789999988543 2
Q ss_pred ---hhhcccccCCCEEE
Q 021854 175 ---ISNAGSLKGVQHVI 188 (306)
Q Consensus 175 ---~~~~a~~~gvkr~V 188 (306)
++..+.++| ++++
T Consensus 74 h~~~~~~al~~g-k~V~ 89 (164)
T d1tlta1 74 HFDVVSTLLNAG-VHVC 89 (164)
T ss_dssp HHHHHHHHHHTT-CEEE
T ss_pred cccccccccccc-ceee
Confidence 334445566 4654
|
| >d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Ubiquitin activating enzymes (UBA) domain: Amyloid beta precursor protein-binding protein 1, APPBP1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=88.03 E-value=0.22 Score=46.19 Aligned_cols=33 Identities=9% Similarity=0.204 Sum_probs=27.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEec
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVK 131 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~l~R 131 (306)
...+|+|.|+ |++|.++++.|+..|. +++++..
T Consensus 24 ~~s~VlvvG~-gglG~Ei~knLvl~GVg~itivD~ 57 (529)
T d1yova1 24 ESAHVCLINA-TATGTEILKNLVLPGIGSFTIIDG 57 (529)
T ss_dssp HHCEEEECCC-SHHHHHHHHHHHTTTCSEEEEECC
T ss_pred hCCCEEEECC-CHHHHHHHHHHHHhcCCEEEEEcC
Confidence 3589999998 8899999999999996 6666643
|
| >d1nhpa1 c.3.1.5 (A:1-119,A:243-321) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH peroxidase species: Enterococcus faecalis [TaxId: 1351]
Probab=87.95 E-value=0.28 Score=38.51 Aligned_cols=33 Identities=21% Similarity=0.153 Sum_probs=28.5
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCC--CeEEEEecCc
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDK 133 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~g--~~V~~l~R~~ 133 (306)
|||+|.|| |++|-+++..|.+.+ .+|+++.|..
T Consensus 1 ~KVvIIGg-G~~G~e~A~~l~~~~~~~~V~v~~~~~ 35 (198)
T d1nhpa1 1 MKVIVLGS-SHGGYEAVEELLNLHPDAEIQWYEKGD 35 (198)
T ss_dssp CEEEEECS-SHHHHHHHHHHHHHCTTSEEEEEESSS
T ss_pred CEEEEECC-cHHHHHHHHHHHhcCCCCeEEEEeCCC
Confidence 68999999 999999999998864 5788887765
|
| >d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavin-dependent monoxygenase SPBP16F5.08c species: Schizosaccharomyces pombe [TaxId: 4896]
Probab=87.41 E-value=0.34 Score=41.33 Aligned_cols=36 Identities=6% Similarity=0.194 Sum_probs=31.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCC--CeEEEEecCcc
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKR 134 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g--~~V~~l~R~~~ 134 (306)
..|+|+|.|| |.-|...+..|+++| ++|+++-|+..
T Consensus 3 ~~KrVaIIGa-G~sGl~~A~~L~~~~~~~~v~vfEk~~~ 40 (335)
T d2gv8a1 3 TIRKIAIIGA-GPSGLVTAKALLAEKAFDQVTLFERRGS 40 (335)
T ss_dssp SCCEEEEECC-SHHHHHHHHHHHTTTCCSEEEEECSSSS
T ss_pred CCCeEEEECc-CHHHHHHHHHHHHhCCCCCEEEEECCCC
Confidence 4689999999 999999999999877 59999988753
|
| >d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Acetaldehyde dehydrogenase (acylating) species: Pseudomonas sp. [TaxId: 306]
Probab=86.73 E-value=0.23 Score=38.39 Aligned_cols=68 Identities=12% Similarity=0.169 Sum_probs=40.0
Q ss_pred CCeEEEEcCCChHHHHHHHHHHH-C-CCeEEEEe-cCcchh----hhhcCCCceeeeccCCCHHHHHHH--hcCccEEEE
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIV-K-RTRIKALV-KDKRNA----MESFGTYVESMAGDASNKKFLKTA--LRGVRSIIC 169 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~-~-g~~V~~l~-R~~~~~----~~~~~~~v~~v~~D~~d~~~l~~~--~~~~d~vi~ 169 (306)
+.+|.|.| +|++|..+..++++ . ..+++++. |+.+.. .+.+ ++++. ....+.+.+. +.++|+||.
T Consensus 4 kirvaIIG-aG~ig~~~~~~~l~~~~~~el~avas~~~~~~~~~~a~~~--~i~~~---~~~~d~l~~~~~~~~iDiVf~ 77 (157)
T d1nvmb1 4 KLKVAIIG-SGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRM--GVTTT---YAGVEGLIKLPEFADIDFVFD 77 (157)
T ss_dssp CEEEEEEC-CSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHT--TCCEE---SSHHHHHHHSGGGGGEEEEEE
T ss_pred CcEEEEEc-CcHHHHHHHHHHHhhCCcceEEEEEecchhccchhhhhhc--CCccc---ccceeeeeecccccccCEEEE
Confidence 46899999 79999976544544 3 35777764 555421 1222 23322 2234444443 457899999
Q ss_pred cCC
Q 021854 170 PSE 172 (306)
Q Consensus 170 ~~~ 172 (306)
+++
T Consensus 78 ATp 80 (157)
T d1nvmb1 78 ATS 80 (157)
T ss_dssp CSC
T ss_pred cCC
Confidence 855
|
| >d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Polyamine oxidase species: Maize (Zea mays) [TaxId: 4577]
Probab=86.63 E-value=0.35 Score=37.95 Aligned_cols=32 Identities=16% Similarity=0.061 Sum_probs=28.7
Q ss_pred eEEEEcCCChHHHHHHHHHHHCCC-eEEEEecCc
Q 021854 101 AVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDK 133 (306)
Q Consensus 101 ~ilVtGatG~iG~~l~~~L~~~g~-~V~~l~R~~ 133 (306)
+|+|.|| |.-|...+.+|.++|+ +|+++-++.
T Consensus 2 ~V~IIGa-G~aGL~aA~~L~~~G~~~V~vlE~~~ 34 (347)
T d1b5qa1 2 RVIVVGA-GMSGISAAKRLSEAGITDLLILEATD 34 (347)
T ss_dssp CEEEECC-BHHHHHHHHHHHHTTCCCEEEECSSS
T ss_pred CEEEECC-cHHHHHHHHHHHhCCCCcEEEEECCC
Confidence 6999999 9999999999999996 799987754
|
| >d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: UDP-galactopyranose mutase, N-terminal domain domain: UDP-galactopyranose mutase, N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=86.40 E-value=0.3 Score=41.37 Aligned_cols=34 Identities=9% Similarity=0.115 Sum_probs=30.2
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcc
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR 134 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~ 134 (306)
..|+|.|| |.-|..++++|++.|++|.++-++..
T Consensus 2 ~dv~IIGa-G~sGl~~A~~L~~~g~~V~iiEk~~~ 35 (298)
T d1i8ta1 2 YDYIIVGS-GLFGAVCANELKKLNKKVLVIEKRNH 35 (298)
T ss_dssp EEEEEECC-SHHHHHHHHHHGGGTCCEEEECSSSS
T ss_pred ccEEEECC-cHHHHHHHHHHHhCCCcEEEEECCCC
Confidence 46899999 99999999999999999999976653
|
| >d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: MraW-like putative methyltransferases domain: TM0872, methyltransferase domain species: Thermotoga maritima [TaxId: 2336]
Probab=85.67 E-value=1.3 Score=34.91 Aligned_cols=64 Identities=19% Similarity=0.215 Sum_probs=46.9
Q ss_pred EEcCCChHHHHHHHHHHHCCCeEEEEecCcchhh------hhcCCCceeeeccCCCHHHHHHHh--cCccEEEE
Q 021854 104 VTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM------ESFGTYVESMAGDASNKKFLKTAL--RGVRSIIC 169 (306)
Q Consensus 104 VtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~------~~~~~~v~~v~~D~~d~~~l~~~~--~~~d~vi~ 169 (306)
+|-|+|+.-.++++.+ .+.+|+++.++++... ..++.++.++.+++.+...+..-+ ..+|.|+.
T Consensus 30 ~t~G~Gghs~~il~~~--~~~~vi~~D~d~~~l~~a~~~l~~~~~r~~~~~~~f~~~~~~~~~~~~~~vdgIl~ 101 (192)
T d1m6ya2 30 CTVGEGGHSRAILEHC--PGCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSYREADFLLKTLGIEKVDGILM 101 (192)
T ss_dssp TTCTTSHHHHHHHHHC--TTCEEEEEESCHHHHHHHHHHTGGGTTTEEEEECCGGGHHHHHHHTTCSCEEEEEE
T ss_pred ecCCCcHHHHHHHhcC--CCCeEEEeechHHHHHHHHHhhccccccccchhHHHhhHHHHHHHcCCCCcceeee
Confidence 5777888888888766 2468999999997622 234668999999998876665443 56788775
|
| >d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Probable oxidoreductase At4g09670 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=85.66 E-value=0.52 Score=36.67 Aligned_cols=82 Identities=13% Similarity=0.134 Sum_probs=48.1
Q ss_pred CeEEEEcCCChHHHHHHHHHHHC-CCeEEEEe-cCcchhhh---hcC--CCceeeeccCCCHHHHHHHhcCccEEEEcCC
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVK-RTRIKALV-KDKRNAME---SFG--TYVESMAGDASNKKFLKTALRGVRSIICPSE 172 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~-g~~V~~l~-R~~~~~~~---~~~--~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~ 172 (306)
.+|.|.|+ |.+|+..++.|... +++|++++ ++.+++.. .++ ...++ +.|.+.+-+ -.++|+|+.+++
T Consensus 2 iki~iIG~-G~~g~~~~~~l~~~~~~~i~ai~d~~~~~~~~~~~~~~~~~~~~~----~~~~~~ll~-~~~iD~v~I~tp 75 (184)
T d1ydwa1 2 IRIGVMGC-ADIARKVSRAIHLAPNATISGVASRSLEKAKAFATANNYPESTKI----HGSYESLLE-DPEIDALYVPLP 75 (184)
T ss_dssp EEEEEESC-CTTHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCCTTCEE----ESSHHHHHH-CTTCCEEEECCC
T ss_pred eEEEEEcC-CHHHHHHHHHHHhCCCCEEEEEEeCCccccccchhccccccceee----cCcHHHhhh-ccccceeeeccc
Confidence 47999997 88999999988775 57888764 55554322 222 11221 234444332 246899998855
Q ss_pred ch----hhhcccccCCCEEE
Q 021854 173 GF----ISNAGSLKGVQHVI 188 (306)
Q Consensus 173 g~----~~~~a~~~gvkr~V 188 (306)
.. .+..+.++| ++++
T Consensus 76 ~~~h~~~~~~~l~~g-~~v~ 94 (184)
T d1ydwa1 76 TSLHVEWAIKAAEKG-KHIL 94 (184)
T ss_dssp GGGHHHHHHHHHTTT-CEEE
T ss_pred chhhcchhhhhhhcc-ceee
Confidence 43 233344455 3443
|
| >d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Pyrobaculum islandicum [TaxId: 2277]
Probab=85.56 E-value=0.58 Score=38.64 Aligned_cols=35 Identities=11% Similarity=0.125 Sum_probs=31.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCc
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK 133 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~ 133 (306)
.+++|+|-|- |.+|+++++.|.+.|.+|++++...
T Consensus 30 ~g~~v~IqGf-GnVG~~~a~~L~~~Gakvv~vsD~~ 64 (242)
T d1v9la1 30 EGKTVAIQGM-GNVGRWTAYWLEKMGAKVIAVSDIN 64 (242)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHTTTCEEEEEECSS
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEeeccc
Confidence 4799999987 9999999999999999999988654
|
| >d1k3ta1 c.2.1.3 (A:1-164,A:334-359) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Trypanosoma cruzi [TaxId: 5693]
Probab=85.24 E-value=1.8 Score=34.14 Aligned_cols=34 Identities=24% Similarity=0.180 Sum_probs=27.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCC-----CeEEEEecC
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKR-----TRIKALVKD 132 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g-----~~V~~l~R~ 132 (306)
|.++|.|-|= |.||+.+.|+++.++ .+|+++...
T Consensus 1 M~ikigINGF-GRIGR~vlR~~~~~~~~~~~i~iv~Ind~ 39 (190)
T d1k3ta1 1 MPIKVGINGF-GRIGRMVFQALCEDGLLGTEIDVVAVVDM 39 (190)
T ss_dssp CCEEEEEECC-SHHHHHHHHHHHHTTCBTTTEEEEEEEES
T ss_pred CCeEEEEECC-ChHHHHHHHHHHHcCCCCCCeEEEEEecC
Confidence 4679999996 999999999998764 366766654
|
| >d1zh8a1 c.2.1.3 (A:4-131,A:276-328) Hypothetical protein TM0312 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Hypothetical protein TM0312 species: Thermotoga maritima [TaxId: 2336]
Probab=85.22 E-value=0.91 Score=35.15 Aligned_cols=80 Identities=16% Similarity=0.074 Sum_probs=45.8
Q ss_pred CCeEEEEcCCChHHHH-HHHHHHHCC--CeEEEEe-cCcchhhh---hcCCCceeeeccCCCHHHHHHHh--cCccEEEE
Q 021854 99 RDAVLVTDGDSDIGQM-VILSLIVKR--TRIKALV-KDKRNAME---SFGTYVESMAGDASNKKFLKTAL--RGVRSIIC 169 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~-l~~~L~~~g--~~V~~l~-R~~~~~~~---~~~~~v~~v~~D~~d~~~l~~~~--~~~d~vi~ 169 (306)
..+|.|.|+ |.+|+. .++.+.+.+ ++|++++ ++.+++.. .++ ...+ +.|. ++++ .++|+|+.
T Consensus 3 kirigiIG~-G~~g~~~h~~~l~~~~~~~~i~~v~d~~~~~~~~~~~~~~--~~~~---~~~~---~ell~~~~id~v~I 73 (181)
T d1zh8a1 3 KIRLGIVGC-GIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMVG--NPAV---FDSY---EELLESGLVDAVDL 73 (181)
T ss_dssp CEEEEEECC-SHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHHHS--SCEE---ESCH---HHHHHSSCCSEEEE
T ss_pred CcEEEEEcC-CHHHHHHHHHHHHhCCCCeEEEEEEeccHhhhhhhhcccc--ccce---eeee---eccccccccceeec
Confidence 358999997 999987 466666543 5777664 44544332 232 1111 2343 3444 35899998
Q ss_pred cCCch----hhhcccccCCCEEE
Q 021854 170 PSEGF----ISNAGSLKGVQHVI 188 (306)
Q Consensus 170 ~~~g~----~~~~a~~~gvkr~V 188 (306)
+++.. ++..+.++| ++++
T Consensus 74 ~tp~~~h~~~~~~al~~g-k~V~ 95 (181)
T d1zh8a1 74 TLPVELNLPFIEKALRKG-VHVI 95 (181)
T ss_dssp CCCGGGHHHHHHHHHHTT-CEEE
T ss_pred cccccccccccccccccc-hhhh
Confidence 85543 334444555 5654
|
| >d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains species: Escherichia coli [TaxId: 562]
Probab=85.20 E-value=1.5 Score=32.41 Aligned_cols=73 Identities=8% Similarity=0.059 Sum_probs=52.9
Q ss_pred CCeEEEEcCC----------ChHHHHHHHHHHHCCCeEEEEecCcchhhhhcC--CCceeeeccCCCHHHHHHHhc--Cc
Q 021854 99 RDAVLVTDGD----------SDIGQMVILSLIVKRTRIKALVKDKRNAMESFG--TYVESMAGDASNKKFLKTALR--GV 164 (306)
Q Consensus 99 ~~~ilVtGat----------G~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~--~~v~~v~~D~~d~~~l~~~~~--~~ 164 (306)
.++|||.|+. .+.+...++.|.+.|++++++.-+++.....+. +++- ..--..+.+.+.++ ..
T Consensus 7 ~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~g~~~iliN~NP~TVstd~d~aD~lY---fePlt~e~v~~Ii~~E~p 83 (127)
T d1a9xa3 7 IKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVINVNSNPATIMTDPEMADATY---IEPIHWEVVRKIIEKERP 83 (127)
T ss_dssp CCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTCEEEEECSCTTCGGGCGGGSSEEE---CSCCCHHHHHHHHHHHCC
T ss_pred CCEEEEECCCcCcccccchhHHHHHHHHHHHHHcCCeEEEecCchHhhhcChhhcceee---eecCCHHHHHHHHHHhCc
Confidence 5899999994 347889999999999999999999988554432 2222 22234567766664 67
Q ss_pred cEEEEcCCch
Q 021854 165 RSIICPSEGF 174 (306)
Q Consensus 165 d~vi~~~~g~ 174 (306)
|.|+...+|.
T Consensus 84 d~il~~~GGQ 93 (127)
T d1a9xa3 84 DAVLPTMGGQ 93 (127)
T ss_dssp SEEECSSSHH
T ss_pred CCeEEEeeee
Confidence 9998776655
|
| >d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Monooxygenase PhzS species: Pseudomonas aeruginosa [TaxId: 287]
Probab=85.08 E-value=0.62 Score=37.63 Aligned_cols=34 Identities=15% Similarity=0.135 Sum_probs=30.1
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCC-eEEEEecCcc
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKR 134 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~g~-~V~~l~R~~~ 134 (306)
.+|+|.|| |..|..++..|.+.|. +|+++-|.+.
T Consensus 2 ~~V~IvGa-G~aGl~~A~~L~~~Gi~~V~V~Er~~~ 36 (288)
T d3c96a1 2 IDILIAGA-GIGGLSCALALHQAGIGKVTLLESSSE 36 (288)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESSSS
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCCCeEEEEeCCCC
Confidence 68999999 9999999999999995 8888877663
|
| >d1u0sy_ c.23.1.1 (Y:) CheY protein {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: CheY-like family: CheY-related domain: CheY protein species: Thermotoga maritima [TaxId: 2336]
Probab=84.80 E-value=1.9 Score=30.73 Aligned_cols=90 Identities=16% Similarity=0.185 Sum_probs=54.4
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcC-CCceeeeccCCCH--------HHHHHHhcCccEEEE
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG-TYVESMAGDASNK--------KFLKTALRGVRSIIC 169 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~-~~v~~v~~D~~d~--------~~l~~~~~~~d~vi~ 169 (306)
+++|||.--.-.+-..+...|.+.|++|+....+...+.+... ....++..|+.=+ ..+++....+.++++
T Consensus 1 GkrILivDD~~~~~~~l~~~L~~~g~~v~~~a~~~~~al~~~~~~~~dliilD~~mp~~~G~e~~~~ir~~~~~~pvi~l 80 (118)
T d1u0sy_ 1 GKRVLIVDDAAFMRMMLKDIITKAGYEVAGEATNGREAVEKYKELKPDIVTMDITMPEMNGIDAIKEIMKIDPNAKIIVC 80 (118)
T ss_dssp CCEEEEECSCHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCCSEEEEECSCGGGCHHHHHHHHHHHCTTCCEEEE
T ss_pred CCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCHHHHHHHHHhccCCEEEEecCCCCCCHHHHHHHHHHhCCCCcEEEE
Confidence 5899999998899999999999999999876666655332221 2456677777521 222333334455555
Q ss_pred cCCc--hhhhcccccCCCEEE
Q 021854 170 PSEG--FISNAGSLKGVQHVI 188 (306)
Q Consensus 170 ~~~g--~~~~~a~~~gvkr~V 188 (306)
.+.+ .....+.+.|+..|+
T Consensus 81 s~~~~~~~~~~a~~~Ga~~yl 101 (118)
T d1u0sy_ 81 SAMGQQAMVIEAIKAGAKDFI 101 (118)
T ss_dssp ECTTCHHHHHHHHHTTCCEEE
T ss_pred EccCCHHHHHHHHHcCCCEEE
Confidence 4222 123334456666554
|
| >d2nu7a1 c.2.1.8 (A:2-120) Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain species: Escherichia coli [TaxId: 562]
Probab=84.72 E-value=2.4 Score=30.76 Aligned_cols=88 Identities=10% Similarity=0.113 Sum_probs=55.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEc-CCchhh
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP-SEGFIS 176 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~-~~g~~~ 176 (306)
+..+|+|-|-||..|+.-+++..+.|-+|++-+.....-+... ++.+ .|.- .+.+++ .++|+-+.. .+.+..
T Consensus 5 k~trVlvQGiTG~~G~~ht~~m~~yGT~vVaGVtPgkgG~~~~--giPV--f~sV-~eAv~~--~~~~~SvIfVPp~~a~ 77 (119)
T d2nu7a1 5 KNTKVICQGFTGSQGTFHSEQAIAYGTKMVGGVTPGKGGTTHL--GLPV--FNTV-REAVAA--TGATASVIYVPAPFCK 77 (119)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCTTEEET--TEEE--ESSH-HHHHHH--HCCCEEEECCCGGGHH
T ss_pred CCCcEEEEcCCCcHHHHHHHHHHHhCCceEEEEccCCCCcccC--CCch--hhHH-HHHHHH--hCCCeEEEeccHHHHH
Confidence 3579999999999999999999999999998876553322111 1221 2211 122332 256655443 445544
Q ss_pred hcc---cccCCCEEEEecC
Q 021854 177 NAG---SLKGVQHVILLSQ 192 (306)
Q Consensus 177 ~~a---~~~gvkr~V~iSS 192 (306)
+++ ..++++.+|.++-
T Consensus 78 dA~~EAi~agI~~iV~ITE 96 (119)
T d2nu7a1 78 DSILEAIDAGIKLIITITE 96 (119)
T ss_dssp HHHHHHHHTTCSEEEECCC
T ss_pred HHHHHHHHCCCCEEEEecC
Confidence 443 3579999888764
|
| >d2vapa1 c.32.1.1 (A:23-231) Cell-division protein FtsZ {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Tubulin nucleotide-binding domain-like superfamily: Tubulin nucleotide-binding domain-like family: Tubulin, GTPase domain domain: Cell-division protein FtsZ species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=84.54 E-value=1.2 Score=35.87 Aligned_cols=93 Identities=13% Similarity=0.215 Sum_probs=59.3
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCC---eEEEEecCcchhhhhcCCCceeeeccC-------------------CCH
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRT---RIKALVKDKRNAMESFGTYVESMAGDA-------------------SNK 154 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~---~V~~l~R~~~~~~~~~~~~v~~v~~D~-------------------~d~ 154 (306)
....+|.|.|- |+-|..++.++.+.+. +.+++.-+.+.+.. .+...++..+.- .+.
T Consensus 13 ~~~~ki~ViGv-GGaG~n~v~~l~~~~~~~v~~iainTD~~~L~~-~~~~~ki~ig~~~t~g~Gag~~p~~g~~aa~e~~ 90 (209)
T d2vapa1 13 QTKAKITVVGC-GGAGNNTITRLKMEGIEGAKTVAINTDAQQLIR-TKADKKILIGKKLTRGLGAGGNPKIGEEAAKESA 90 (209)
T ss_dssp TTCCCEEEEEE-HHHHHHHHHHHHHHTCTTEEEEEEESBHHHHHT-SCCSEEEECCTTTTTTBCCTTCHHHHHHHHHHTH
T ss_pred ccCCcEEEEEe-CChHHHHHHHHHHcCCCceEEEEEeCCHHHHhc-CCcchhcccccccccccccccchHHHHHHHHHHH
Confidence 35689999999 8899999999998774 44555554433322 112222222211 134
Q ss_pred HHHHHHhcCccEEEEc---CCch-------hhhcccccCCCEEEEec
Q 021854 155 KFLKTALRGVRSIICP---SEGF-------ISNAGSLKGVQHVILLS 191 (306)
Q Consensus 155 ~~l~~~~~~~d~vi~~---~~g~-------~~~~a~~~gvkr~V~iS 191 (306)
+.+.+.++++|.||.+ .+++ +++.+++.++..+-++.
T Consensus 91 ~~I~~~l~~~d~vfi~AGlGGGTGsgaapvia~~ake~g~lvv~ivt 137 (209)
T d2vapa1 91 EEIKAAIQDSDMVFITCGLGGGTGTGSAPVVAEISKKIGALTVAVVT 137 (209)
T ss_dssp HHHHHHHTTCSEEEEEEETTSSHHHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred HHHHHhccCCCEEEEEEeCCCCccccHHHHHHHHHHHcCCcEEEEEe
Confidence 6788899999999976 2332 66778888775444443
|
| >d1xeaa1 c.2.1.3 (A:2-122,A:267-312) Putative oxidoreductase VCA1048 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Putative oxidoreductase VCA1048 species: Vibrio cholerae [TaxId: 666]
Probab=84.21 E-value=0.68 Score=35.34 Aligned_cols=79 Identities=11% Similarity=0.061 Sum_probs=45.0
Q ss_pred CeEEEEcCCChHHHH-HHHHHHHC-CCeEEEEecCcchhhh---hcCCCceeeeccCCCHHHHHHHhcCccEEEEcCCch
Q 021854 100 DAVLVTDGDSDIGQM-VILSLIVK-RTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALRGVRSIICPSEGF 174 (306)
Q Consensus 100 ~~ilVtGatG~iG~~-l~~~L~~~-g~~V~~l~R~~~~~~~---~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~g~ 174 (306)
++|.|.|+ |.+|+. .++.|... +.+++++.++++++.. .++ +..+..|+ +.+-+ .++|+|+.+++..
T Consensus 2 irvgiiG~-G~~~~~~~~~~l~~~~~~~~~~~d~~~~~~~~~~~~~~--~~~~~~~~---~~ll~--~~iD~V~I~tp~~ 73 (167)
T d1xeaa1 2 LKIAMIGL-GDIAQKAYLPVLAQWPDIELVLCTRNPKVLGTLATRYR--VSATCTDY---RDVLQ--YGVDAVMIHAATD 73 (167)
T ss_dssp EEEEEECC-CHHHHHTHHHHHTTSTTEEEEEECSCHHHHHHHHHHTT--CCCCCSST---TGGGG--GCCSEEEECSCGG
T ss_pred eEEEEEcC-CHHHHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHhcc--cccccccH---HHhcc--cccceeccccccc
Confidence 68999998 889976 55666554 4577766666655332 222 22222333 22211 3689999885543
Q ss_pred ----hhhcccccCCCEE
Q 021854 175 ----ISNAGSLKGVQHV 187 (306)
Q Consensus 175 ----~~~~a~~~gvkr~ 187 (306)
++..+.+.|. ++
T Consensus 74 ~H~~~~~~al~~gk-~V 89 (167)
T d1xeaa1 74 VHSTLAAFFLHLGI-PT 89 (167)
T ss_dssp GHHHHHHHHHHTTC-CE
T ss_pred cccccccccccccc-cc
Confidence 3344455664 44
|
| >d1w5fa1 c.32.1.1 (A:22-215) Cell-division protein FtsZ {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Tubulin nucleotide-binding domain-like superfamily: Tubulin nucleotide-binding domain-like family: Tubulin, GTPase domain domain: Cell-division protein FtsZ species: Thermotoga maritima [TaxId: 2336]
Probab=84.17 E-value=1.3 Score=35.22 Aligned_cols=89 Identities=15% Similarity=0.168 Sum_probs=57.2
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCC---eEEEEecCcchhhhhcCCCceeeeccC-------------------CCHHHH
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVKRT---RIKALVKDKRNAMESFGTYVESMAGDA-------------------SNKKFL 157 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~g~---~V~~l~R~~~~~~~~~~~~v~~v~~D~-------------------~d~~~l 157 (306)
.+|.|.|- |+-|..++.+|.+.+. +.+++.-+.+.+. ..+...++..+.- .+.+.+
T Consensus 1 ~kI~viGv-GGaG~n~v~~l~~~~~~~v~~iainTD~~~L~-~~~a~~ki~iG~~~t~G~G~g~~p~~g~~aa~e~~~~I 78 (194)
T d1w5fa1 1 LKIKVIGV-GGAGNNAINRMIEIGIHGVEFVAVNTDLQVLE-ASNADVKIQIGENITRGLGAGGRPEIGEQAALESEEKI 78 (194)
T ss_dssp CCEEEEEE-HHHHHHHHHHHHHHCCTTEEEEEEESCHHHHH-TCCCSEEEECCTTTTTTSCCTTCHHHHHHHHHHTHHHH
T ss_pred CeEEEEEe-CchHHHHHHHHHHcCCCceEEEEEcCCHHHHh-cCCcceEEecccccCCCcccccCchhhHhHHHHHHHHH
Confidence 47899998 8899999999998763 5556555554432 1222233333211 135778
Q ss_pred HHHhcCccEEEEc---CCch-------hhhcccccCCCEEEEe
Q 021854 158 KTALRGVRSIICP---SEGF-------ISNAGSLKGVQHVILL 190 (306)
Q Consensus 158 ~~~~~~~d~vi~~---~~g~-------~~~~a~~~gvkr~V~i 190 (306)
.+.+++.|.||.+ .+++ +++.+++.++..+-++
T Consensus 79 ~~~l~~~d~vfi~AGlGGgTGtgaapviA~~ake~g~lvv~iv 121 (194)
T d1w5fa1 79 REVLQDTHMVFITAGFGGGTGTGASPVIAKIAKEMGILTVAIV 121 (194)
T ss_dssp HHHTTTCSEEEEEEETTSSHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHhcCCCeEEEEEecCCCcccchHHHHHHHHHHcCCceEEEE
Confidence 8899999999976 2222 6677888886544443
|
| >d1dssg1 c.2.1.3 (G:1-148,G:313-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {South China Sea lobster (Palinurus versicolor) [TaxId: 150436]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: South China Sea lobster (Palinurus versicolor) [TaxId: 150436]
Probab=83.86 E-value=2.1 Score=33.08 Aligned_cols=89 Identities=13% Similarity=0.125 Sum_probs=54.0
Q ss_pred eEEEEcCCChHHHHHHHHHHHCCCeEEEEecC-cch--hhh---------hcCCCce------------eeeccCCCHHH
Q 021854 101 AVLVTDGDSDIGQMVILSLIVKRTRIKALVKD-KRN--AME---------SFGTYVE------------SMAGDASNKKF 156 (306)
Q Consensus 101 ~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~-~~~--~~~---------~~~~~v~------------~v~~D~~d~~~ 156 (306)
||.|-|= |.||+.+.|+++..+.+|+++... .+. +.- .++..++ +....-.+++.
T Consensus 2 kIgINGf-GRIGR~~~R~~~~~~~~ivaINd~~~~~~~~~yLlkyDS~hG~~~~~i~~~~~~l~ing~~I~~~~~~~p~~ 80 (169)
T d1dssg1 2 KIGINGF-GRIGRLVLRAALEMGAQVVAVNDPFIALEYMVYMFKYDSTHGMFKGEVKAEDGALVVDGKKITVFNEMKPEN 80 (169)
T ss_dssp CEEEECC-SHHHHHHHHHHHHHTCCEEEEECTTSCHHHHHHHHHCCTTTCCCSSCEEEETTEEEETTEEEEEECCSSGGG
T ss_pred eEEEECC-cHHHHHHHHHHHhCCCcEEEECCCCcCHHHHHHHHhcccccCCcCCeEEEeCCEEEECCEEEEEEecCChHH
Confidence 6888885 999999999999999999988763 322 111 1111111 12222335554
Q ss_pred HHHHhcCccEEEEcCCchhh-hcc---cccCCCEEEEe
Q 021854 157 LKTALRGVRSIICPSEGFIS-NAG---SLKGVQHVILL 190 (306)
Q Consensus 157 l~~~~~~~d~vi~~~~g~~~-~~a---~~~gvkr~V~i 190 (306)
+.=.-.++|+|+=|++-+.. +.+ .+.|+|++|..
T Consensus 81 i~W~~~gvD~ViEcTG~f~~~~~~~~hl~~gakkViis 118 (169)
T d1dssg1 81 IPWSKAGAEYIVESTGVFTTIEKASAHFKGGAKKVIIS 118 (169)
T ss_dssp CCHHHHTCCEEEECSSSCCSHHHHGGGGTTTCSEEEES
T ss_pred CCccccCCCEEEecCceEcCHHHHHHHHhcCCceEeec
Confidence 32223478999988775522 222 24589998764
|
| >d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Leucine dehydrogenase species: Bacillus sphaericus [TaxId: 1421]
Probab=83.84 E-value=0.8 Score=37.49 Aligned_cols=68 Identities=9% Similarity=-0.011 Sum_probs=45.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchhhhhcC-CCceeeeccCCCHHHHHHHhcCccEEEEcCCc
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG-TYVESMAGDASNKKFLKTALRGVRSIICPSEG 173 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~-~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~g 173 (306)
.+++|+|-|- |.+|+++++.|.+.|.+|++...+......... .+.+.+ +.+.+ .-..||+++-|+-+
T Consensus 38 ~g~~v~IqG~-GnVG~~~a~~L~~~Gakvv~~d~~~~~~~~~~~~~g~~~~-----~~~~~--~~~~cDIl~PcA~~ 106 (230)
T d1leha1 38 EGLAVSVQGL-GNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEEGADAV-----APNAI--YGVTCDIFAPCALG 106 (230)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCCEEC-----CGGGT--TTCCCSEEEECSCS
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEeecccHHHHHHHHHhcCCccc-----CCccc--ccccccEecccccc
Confidence 4799999998 999999999999999999988777655332211 112221 11211 12468999977433
|
| >d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain 3 {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: C-terminal domain of adrenodoxin reductase-like domain: Dihydropyrimidine dehydrogenase, domain 3 species: Pig (Sus scrofa) [TaxId: 9823]
Probab=83.80 E-value=0.7 Score=35.18 Aligned_cols=34 Identities=21% Similarity=0.191 Sum_probs=29.3
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEecCc
Q 021854 99 RDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDK 133 (306)
Q Consensus 99 ~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~l~R~~ 133 (306)
+++|+|.|| |.+|...+..+.+.|. .|+++.|..
T Consensus 45 ~~kVvVIGG-GdtA~D~A~~a~r~GA~~V~vi~rr~ 79 (153)
T d1gtea3 45 RGAVIVLGA-GDTAFDCATSALRCGARRVFLVFRKG 79 (153)
T ss_dssp CSEEEEECS-SHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred CCEEEEECC-ChhHHHHHHHHHHcCCcceeEEEeCC
Confidence 578999998 9999999999999997 477777755
|
| >d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: 6-phospho-beta-glucosidase species: Thermotoga maritima [TaxId: 2336]
Probab=83.57 E-value=0.88 Score=34.87 Aligned_cols=65 Identities=8% Similarity=0.018 Sum_probs=39.6
Q ss_pred CeEEEEcCCChHHHHHHHHHH-H--C---CCeEEEEecCcchhhhh-------cCCCceeeeccCCCHHHHHHHhcCccE
Q 021854 100 DAVLVTDGDSDIGQMVILSLI-V--K---RTRIKALVKDKRNAMES-------FGTYVESMAGDASNKKFLKTALRGVRS 166 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~-~--~---g~~V~~l~R~~~~~~~~-------~~~~v~~v~~D~~d~~~l~~~~~~~d~ 166 (306)
|+|.|.|| |.+|...+-..+ . . ..++.++..+++++... ......+... + ..+++++++|+
T Consensus 1 mKIaiIGa-Gs~g~~~~~~~l~~~~~~~~~~el~L~Did~~k~~~~~d~~~~~~~~~~~~~~t--~---~~~~~l~~aDv 74 (162)
T d1up7a1 1 MRIAVIGG-GSSYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVDFVKRLVKDRFKVLIS--D---TFEGAVVDAKY 74 (162)
T ss_dssp CEEEEETT-TCTTHHHHHHHHHHHTTTSCCCEEEEECSCHHHHHHHHHHHHHHHTTSSEEEEC--S---SHHHHHTTCSE
T ss_pred CEEEEECC-CHHHHHHHHHHHHhcccccCccEEEEEecCcHHHHHHHHHHHhhhccCceEEEe--c---CcccccCCCCE
Confidence 68999999 667755553322 2 1 35899998888773311 1222333221 2 23567899999
Q ss_pred EEEc
Q 021854 167 IICP 170 (306)
Q Consensus 167 vi~~ 170 (306)
||..
T Consensus 75 VVit 78 (162)
T d1up7a1 75 VIFQ 78 (162)
T ss_dssp EEEC
T ss_pred EEEe
Confidence 9987
|
| >d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Monoamine oxidase B species: Human (Homo sapiens) [TaxId: 9606]
Probab=83.21 E-value=0.62 Score=38.73 Aligned_cols=31 Identities=19% Similarity=0.115 Sum_probs=28.5
Q ss_pred EEEEcCCChHHHHHHHHHHHCCCeEEEEecCc
Q 021854 102 VLVTDGDSDIGQMVILSLIVKRTRIKALVKDK 133 (306)
Q Consensus 102 ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~ 133 (306)
|+|.|| |.-|...+.+|+++|++|+++-++.
T Consensus 2 ViVIGa-G~aGL~aA~~L~~~G~~V~VlE~~~ 32 (383)
T d2v5za1 2 VVVVGG-GISGMAAAKLLHDSGLNVVVLEARD 32 (383)
T ss_dssp EEEECC-BHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred EEEECC-CHHHHHHHHHHHhCCCCEEEEecCC
Confidence 789999 9999999999999999999997655
|
| >d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: HI0933 N-terminal domain-like domain: Flavoprotein BC4706 species: Bacillus cereus [TaxId: 1396]
Probab=82.72 E-value=0.74 Score=36.94 Aligned_cols=34 Identities=21% Similarity=0.268 Sum_probs=30.4
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcc
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR 134 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~ 134 (306)
--|+|.|| |-.|...+.+|+++|++|+++-++..
T Consensus 3 yDViIIGa-G~aGl~aA~~la~~G~~V~liEk~~~ 36 (251)
T d2i0za1 3 YDVIVIGG-GPSGLMAAIGAAEEGANVLLLDKGNK 36 (251)
T ss_dssp CSEEEECC-SHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CCEEEECc-CHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence 45899999 99999999999999999999987653
|
| >d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Clostridium symbiosum [TaxId: 1512]
Probab=82.38 E-value=0.68 Score=38.53 Aligned_cols=36 Identities=8% Similarity=-0.039 Sum_probs=32.3
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCc
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK 133 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~ 133 (306)
..+++|+|-|- |.+|+.+++.|.+.|++|++++...
T Consensus 34 l~g~~v~IQGf-GnVG~~~a~~L~e~GakvvavsD~~ 69 (255)
T d1bgva1 34 LVGKTVALAGF-GNVAWGAAKKLAELGAKAVTLSGPD 69 (255)
T ss_dssp STTCEEEECCS-SHHHHHHHHHHHHHTCEEEEEEETT
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEecCC
Confidence 35799999996 9999999999999999999998754
|
| >d1gado1 c.2.1.3 (O:0-148,O:313-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Escherichia coli [TaxId: 562]
Probab=82.22 E-value=2.1 Score=32.98 Aligned_cols=90 Identities=18% Similarity=0.148 Sum_probs=54.2
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCC-CeEEEEecCcch--hh---------hhcCCCce------------eeeccCCCHH
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRN--AM---------ESFGTYVE------------SMAGDASNKK 155 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~g-~~V~~l~R~~~~--~~---------~~~~~~v~------------~v~~D~~d~~ 155 (306)
++|.|-|= |.||+.+.|+++++. .+|+++....+. +. ..++..++ +-.....|++
T Consensus 2 ikigINGF-GRIGR~v~R~~~~~~~i~ivaINd~~~~~~~ayLl~yDSvhG~~~~~v~~~~~~l~ing~~I~i~~~~~p~ 80 (166)
T d1gado1 2 IKVGINGF-GRIGRIVFRAAQKRSDIEIVAINDLLDADYMAYMLKYDSTHGRFDGTVEVKDGHLIVNGKKIRVTAERDPA 80 (166)
T ss_dssp EEEEEECC-SHHHHHHHHHHHTCSSEEEEEEECSSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCSSGG
T ss_pred eEEEEECC-cHHHHHHHHHHhhCCCeEEEEEeCCCCHHHHhhhheecCCCCCcCCeEEEeCCEEEECCEEEEEEeCCChH
Confidence 57899986 999999999999875 688888764432 00 01111121 1122233555
Q ss_pred HHHHHhcCccEEEEcCCchhh-hcc---cccCCCEEEEe
Q 021854 156 FLKTALRGVRSIICPSEGFIS-NAG---SLKGVQHVILL 190 (306)
Q Consensus 156 ~l~~~~~~~d~vi~~~~g~~~-~~a---~~~gvkr~V~i 190 (306)
.+.=.-.++|+|+-|++-+.. +.+ .+.|+|++|+.
T Consensus 81 ~i~W~~~gvDiViEcTG~f~t~~~~~~hl~~gakkViiS 119 (166)
T d1gado1 81 NLKWDEVGVDVVAEATGLFLTDETARKHITAGAKKVVMT 119 (166)
T ss_dssp GGCHHHHTCSEEEECSSSCCSHHHHTHHHHTTCSEEEES
T ss_pred HCCccccCCCEEEEccccccCHHHHHHHhcCCCceEEee
Confidence 433223478999988775532 222 34699998753
|
| >d2csua3 c.23.4.1 (A:291-453) Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3 {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: Succinyl-CoA synthetase domains family: Succinyl-CoA synthetase domains domain: Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3 species: Pyrococcus horikoshii [TaxId: 53953]
Probab=82.10 E-value=2.1 Score=32.34 Aligned_cols=72 Identities=10% Similarity=0.071 Sum_probs=45.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCc-chhhhhcCCCcee-eeccC---CCHHHHHHHhc------CccE
Q 021854 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK-RNAMESFGTYVES-MAGDA---SNKKFLKTALR------GVRS 166 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~-~~~~~~~~~~v~~-v~~D~---~d~~~l~~~~~------~~d~ 166 (306)
++++|.|.+.+|+.|--.+..+...|.++--+.... +++.+..+..... -..|+ .+.+.+.++++ ++|.
T Consensus 2 ~G~rvaiit~sGG~~~l~aD~~~~~Gl~l~~l~~~t~~~L~~~lp~~~~~~NPlD~~~~~~~~~~~~~l~~~~~d~~vd~ 81 (163)
T d2csua3 2 RGNKVAIMTNAGGPGVLTADELDKRGLKLATLEEKTIEELRSFLPPMAAVKNPVDMIASARGEDYYRTAKLLLQDPNVDM 81 (163)
T ss_dssp SSSEEEEEESCHHHHHHHHHHHHTTTCEECCCCHHHHHHHHHHSCTTCEESSEEECCTTCCHHHHHHHHHHHHHSTTCSE
T ss_pred CCCeEEEEECChHHHHHHHHHHHHcCCccCCCCHHHHHHHHHhCCCcccCCCcccccCCCCHHHHHHHHHHHHcCCCcCE
Confidence 478999999999999999999999998876664433 2344445432221 12233 24455544443 5677
Q ss_pred EEE
Q 021854 167 IIC 169 (306)
Q Consensus 167 vi~ 169 (306)
|+.
T Consensus 82 v~v 84 (163)
T d2csua3 82 LIA 84 (163)
T ss_dssp EEE
T ss_pred EEE
Confidence 654
|
| >d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavin-dependent monoxygenase SPBP16F5.08c species: Schizosaccharomyces pombe [TaxId: 4896]
Probab=81.79 E-value=0.66 Score=32.86 Aligned_cols=37 Identities=14% Similarity=-0.004 Sum_probs=30.6
Q ss_pred cCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcc
Q 021854 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR 134 (306)
Q Consensus 97 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~ 134 (306)
-.+|+|+|.|+ |.-|..++.+|+...-+++.+.|...
T Consensus 30 f~gK~VlVVG~-g~Sa~dia~~l~~~ak~v~~~~~r~~ 66 (107)
T d2gv8a2 30 FVGESVLVVGG-ASSANDLVRHLTPVAKHPIYQSLLGG 66 (107)
T ss_dssp GTTCCEEEECS-SHHHHHHHHHHTTTSCSSEEEECTTC
T ss_pred cCCCeEEEECC-CCCHHHHHHHHHHhcCEEEEEEecCc
Confidence 35799999998 89999999999988777776666554
|
| >d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Phenylacetone monooxygenase species: Thermobifida fusca [TaxId: 2021]
Probab=81.73 E-value=0.76 Score=38.85 Aligned_cols=34 Identities=15% Similarity=0.091 Sum_probs=30.9
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcc
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR 134 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~ 134 (306)
-.|+|.|| |..|...+..|.++|.+|+++-++.+
T Consensus 8 ~dV~IIGA-G~sGl~~a~~L~~~G~~v~i~Ek~~~ 41 (298)
T d1w4xa1 8 VDVLVVGA-GFSGLYALYRLRELGRSVHVIETAGD 41 (298)
T ss_dssp EEEEEECC-SHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CCEEEECc-cHHHHHHHHHHHhCCCCEEEEEcCCC
Confidence 46999999 99999999999999999999987764
|
| >d2blna2 c.65.1.1 (A:1-203) Polymyxin resistance protein ArnA, N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Formyltransferase superfamily: Formyltransferase family: Formyltransferase domain: Polymyxin resistance protein ArnA, N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=81.53 E-value=1.2 Score=35.52 Aligned_cols=73 Identities=14% Similarity=0.081 Sum_probs=45.3
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcchh---------hhhc-CCCceeee-ccCCCHHHHHHHh-cCccEE
Q 021854 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA---------MESF-GTYVESMA-GDASNKKFLKTAL-RGVRSI 167 (306)
Q Consensus 100 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~---------~~~~-~~~v~~v~-~D~~d~~~l~~~~-~~~d~v 167 (306)
|+|+|.|. +..|..+++.|++.|++|.++.-.+++. .+.. ..++.++. .++.+.+.++..- ..+|.+
T Consensus 1 Mkiv~~~~-~~~g~~~l~~L~~~g~~I~~Vvt~~~~~~~~~~~~~~~~~a~~~~i~~~~~~~~~~~~~~~~i~~~~~Dli 79 (203)
T d2blna2 1 MKTVVFAY-HDMGCLGIEALLAAGYEISAIFTHTDNPGEKAFYGSVARLAAERGIPVYAPDNVNHPLWVERIAQLSPDVI 79 (203)
T ss_dssp CEEEEEEC-HHHHHHHHHHHHHTTCEEEEEECCCC------CCCCHHHHHHHHTCCEECCSCCCSHHHHHHHHHTCCSEE
T ss_pred CeEEEEec-CHHHHHHHHHHHHCCCCEEEEEcCCCCCCcccccCHHHHHHHHcCCcceecccccchhhhhhhhhhcccce
Confidence 68999966 6689999999999999998776433221 0000 11344443 4566655444332 267999
Q ss_pred EEcCCc
Q 021854 168 ICPSEG 173 (306)
Q Consensus 168 i~~~~g 173 (306)
|++.-+
T Consensus 80 i~~g~~ 85 (203)
T d2blna2 80 FSFYYR 85 (203)
T ss_dssp EEESCC
T ss_pred eeeecc
Confidence 887434
|
| >d1hdgo1 c.2.1.3 (O:1-148,O:313-331) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Thermotoga maritima [TaxId: 2336]
Probab=81.16 E-value=3.6 Score=31.67 Aligned_cols=88 Identities=18% Similarity=0.149 Sum_probs=51.4
Q ss_pred eEEEEcCCChHHHHHHHHHHHC---CCeEEEEecCcch--hhh---------hcCCCce------------eeeccCCCH
Q 021854 101 AVLVTDGDSDIGQMVILSLIVK---RTRIKALVKDKRN--AME---------SFGTYVE------------SMAGDASNK 154 (306)
Q Consensus 101 ~ilVtGatG~iG~~l~~~L~~~---g~~V~~l~R~~~~--~~~---------~~~~~v~------------~v~~D~~d~ 154 (306)
+|.|-|- |.||+.+.|+++.+ +.+|+++....+. +.- .++..++ +....-.++
T Consensus 2 kIgINGf-GRIGR~v~R~~~~~~~~~i~vvaINd~~~~e~~ayLlkyDS~hG~~~~~v~~~~~~l~ing~~I~~~~~~~p 80 (169)
T d1hdgo1 2 RVAINGF-GRIGRLVYRIIYERKNPDIEVVAINDLTDTKTLAHLLKYDSVHKKFPGKVEYTENSLIVDGKEIKVFAEPDP 80 (169)
T ss_dssp EEEEECC-SHHHHHHHHHHHHHTCTTCEEEEEECSSCHHHHHHHHHCCTTTCCCSSCEEECSSEEEETTEEEEEECCSSG
T ss_pred EEEEECC-ChHHHHHHHHHHhccCCCEEEEEeccCccHHHHHHHHhccccccccCceEEEECCEEEECCEEEEEEeCCCh
Confidence 6889886 99999999999864 3688887654321 100 1111111 122233355
Q ss_pred HHHHHHhcCccEEEEcCCchhh-hcc---cccCCCEEEE
Q 021854 155 KFLKTALRGVRSIICPSEGFIS-NAG---SLKGVQHVIL 189 (306)
Q Consensus 155 ~~l~~~~~~~d~vi~~~~g~~~-~~a---~~~gvkr~V~ 189 (306)
+.+.=.=.++|+|+=|++-+.. +.+ .+.|+|++|+
T Consensus 81 ~~i~W~~~gvD~ViEcTG~f~t~~~~~~hl~~GakkVii 119 (169)
T d1hdgo1 81 SKLPWKDLGVDFVIESTGVFRNREKAELHLQAGAKKVII 119 (169)
T ss_dssp GGSCHHHHTCCEEEECSSSCCBHHHHTHHHHTTCSEEEE
T ss_pred hhCCccccCCCEEEEecceeccccchhhhccCCCceEEE
Confidence 5432112378999988775522 222 3468999886
|
| >d1h6da1 c.2.1.3 (A:51-212,A:375-433) Glucose-fructose oxidoreductase, N-terminal domain {Zymomonas mobilis [TaxId: 542]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glucose-fructose oxidoreductase, N-terminal domain species: Zymomonas mobilis [TaxId: 542]
Probab=81.03 E-value=0.63 Score=37.58 Aligned_cols=70 Identities=16% Similarity=0.143 Sum_probs=39.7
Q ss_pred CCCeEEEEcCCChHHH-HHHHHHHHC-CCeEEEEe-cCcchhhh---hcCCCceeeeccCCCHHHHHHHhc--CccEEEE
Q 021854 98 ARDAVLVTDGDSDIGQ-MVILSLIVK-RTRIKALV-KDKRNAME---SFGTYVESMAGDASNKKFLKTALR--GVRSIIC 169 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~-~l~~~L~~~-g~~V~~l~-R~~~~~~~---~~~~~v~~v~~D~~d~~~l~~~~~--~~d~vi~ 169 (306)
+.-+|.|.|+ |.+|+ .+++.+... +.+|++++ |+++++.. .++..... ...+.| ++++++ ++|+|+.
T Consensus 32 ~~iriaiIG~-G~~~~~~~~~~~~~~~~~~ivav~d~~~~~a~~~~~~~~i~~~~-~~~~~d---~~ell~~~~iD~V~I 106 (221)
T d1h6da1 32 RRFGYAIVGL-GKYALNQILPGFAGCQHSRIEALVSGNAEKAKIVAAEYGVDPRK-IYDYSN---FDKIAKDPKIDAVYI 106 (221)
T ss_dssp CCEEEEEECC-SHHHHHTHHHHTTTCSSEEEEEEECSCHHHHHHHHHHTTCCGGG-EECSSS---GGGGGGCTTCCEEEE
T ss_pred CCEEEEEEcC-cHHHHHHHHHHHHhCCCceEEEEecCCHHHHHHHHHhhcccccc-ccccCc---hhhhcccccceeeee
Confidence 3459999997 89997 466665543 67888665 45555332 22211000 112233 334443 5799988
Q ss_pred cCC
Q 021854 170 PSE 172 (306)
Q Consensus 170 ~~~ 172 (306)
+++
T Consensus 107 ~tp 109 (221)
T d1h6da1 107 ILP 109 (221)
T ss_dssp CSC
T ss_pred ccc
Confidence 755
|
| >d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Maltose-6'-phosphate glucosidase GlvA species: Bacillus subtilis [TaxId: 1423]
Probab=80.24 E-value=3 Score=31.98 Aligned_cols=68 Identities=15% Similarity=0.136 Sum_probs=41.1
Q ss_pred CCCeEEEEcCCChHHHH-HHHHHHHC-----CCeEEEEecCcchhhh----------hcCCCceeeeccCCCHHHHHHHh
Q 021854 98 ARDAVLVTDGDSDIGQM-VILSLIVK-----RTRIKALVKDKRNAME----------SFGTYVESMAGDASNKKFLKTAL 161 (306)
Q Consensus 98 ~~~~ilVtGatG~iG~~-l~~~L~~~-----g~~V~~l~R~~~~~~~----------~~~~~v~~v~~D~~d~~~l~~~~ 161 (306)
+..+|.|.|| |++|.. ++..|+.. +-+++++..++++++. ..+...++... .+.++++
T Consensus 2 k~~KI~iIGa-Gsv~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~eal 75 (167)
T d1u8xx1 2 KSFSIVIAGG-GSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAAT-----TDPEEAF 75 (167)
T ss_dssp CCEEEEEECT-TSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEE-----SCHHHHH
T ss_pred CCceEEEECC-ChhhhHHHHHHHHhhhhhcCCCEEEEEcCChhHHHHHHHHHHHHHHHhCCCcceEec-----CChhhcc
Confidence 4578999999 555543 44455442 1378888888877431 11222232222 2346789
Q ss_pred cCccEEEEcC
Q 021854 162 RGVRSIICPS 171 (306)
Q Consensus 162 ~~~d~vi~~~ 171 (306)
+++|+||.++
T Consensus 76 ~~AD~Vvita 85 (167)
T d1u8xx1 76 TDVDFVMAHI 85 (167)
T ss_dssp SSCSEEEECC
T ss_pred CCCCEEEECC
Confidence 9999999873
|
| >d1np3a2 c.2.1.6 (A:1-182) Class I ketol-acid reductoisomerase (KARI) {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Class I ketol-acid reductoisomerase (KARI) species: Pseudomonas aeruginosa [TaxId: 287]
Probab=80.08 E-value=2.1 Score=33.44 Aligned_cols=69 Identities=9% Similarity=0.012 Sum_probs=53.1
Q ss_pred ccCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEecCcch-hhhhcCCCceeeeccCCCHHHHHHHhcCccEEEEcCCc
Q 021854 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-AMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG 173 (306)
Q Consensus 96 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~-~~~~~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~~~g 173 (306)
..++++|.|.|- |.-|.+=+..|...|.+|++-.|..++ .+....+++++ -++.++.+..|+|....+.
T Consensus 13 ~ik~k~IaViGY-GsQG~AhAlNLrDSG~~V~VGLr~gs~s~~~A~~~Gf~v--------~~~~eA~~~aDiim~L~PD 82 (182)
T d1np3a2 13 IIQGKKVAIIGY-GSQGHAHACNLKDSGVDVTVGLRSGSATVAKAEAHGLKV--------ADVKTAVAAADVVMILTPD 82 (182)
T ss_dssp HHHTSCEEEECC-SHHHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHTTCEE--------ECHHHHHHTCSEEEECSCH
T ss_pred HHCCCEEEEEee-CcHhHHHHhhhhhcCCCEEEEcCCCCccHHHHhhhcccc--------ccHHHHhhhcCeeeeecch
Confidence 345799999999 999999999999999999999998764 22222334443 3456788899999988664
|