Citrus Sinensis ID: 021869

Local Sequence Feature Prediction

Prediction and Method	Result

Residue Number Marker

Protein Sequence

Secondary Structure (Consensus)

Disordered Region (Consensus)

Transmembrane Helix (Consensus)

Signal Peptide (Consensus)

Coiled Coil (COILS)

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300------

MATTASATRATLSSLSSLSLSLSLHSTPRLSFLSTAKLTRLPKLTLSTVLVRASESDKPNGIVFDDFNNPDEDAAVFDPPTPPEDYTPPPSFDELPMETEDEIAAAYEELYGPAYAGVSVLGNDVYVMDSKAKKTSAFGKTKKEKVKDGFEERVVQVRRVTKVVKGGKQLKFRAIVVVGDKKGQVGVGVAKAKEVIAAVQKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGIPMEELWK

cccccccccEEEEEEEccEEEEcccccccccccccccccccccccccEEEcccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHcccccccccccccHHHcccHcccccccccccccccccccEEEEEEEcccccccccccEEEEEEEEEEEcccccEEEEccccHHHHHHHHHHHHHHHHccEEEEccccccccCEEEEEcccCEEEEECcccccEEECccHHHHHHHHHcccHHHHcccccccHHHHHHHHHHHHHHcccHHHHHHHHcccHHHHcc

***************SSLSLSLSLHSTPRLSFLSTAKLTRLPKLTLSTVLVR**********V*****************T*********************IAAAYEELYGPAYAGVSVLGNDVYVMD*******************GFEERVVQVRRVTKVVKGGKQLKFRAIVVVGDKKGQVGVGVAKAKEVIAAVQKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGIPM*****

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Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries

Annotation	Function Description	Confidence Level	Reference Protein
30S ribosomal protein S5, chloroplastic	Binds directly to 16S ribosomal RNA.	confident	P93014
30S ribosomal protein S5, chloroplastic	Binds directly to 16S ribosomal RNA. Involved in spectinomycin and neamine resistance and streptomycin independence.	probable	Q9ST69

Prediction of Enzyme Commission Number

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3BBN, chain E
Confidence level:very confident
Coverage over the Query: 149-306
View the alignment between query and template
View the model in PyMOL