Citrus Sinensis ID: 021879

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300------
MPLNIVHDKDGLPRIILTEPTGSSAEVLLYGGQVVSWKNERREELLFMSSKSFWKPPKAIRGGIPVCFPQFGNLGLLEQHGFARNRFWSLDEDASPLPPANNQSTVDLILKSTEEDIKAWPRGFELRLRISISPGKLTLIPRVRNVDNKAFSFMFALRNYLSVSDISEVRVEGLETLDYFDYLMNKERFTEQADAITFDGEIDRVYLSTPTKIAIIDHEKKRTFELRKDGMPDSVVWNPWDKKAKALPDMGVDGYKTMLCVDSAAIENPIVLKPFEEWRGRQELSTVSSSYCSGQLDPRRVLHGFH
ccEEEEEcccccEEEEEEcccccEEEEEcccEEEEEEEEcccEEEEEEcccccccccccccccccEEcccccccccccccccccccccEEEEccccccccccccEEEEEEcccccHHccccccEEEEEEEEEEccEEEEEEEEEEccccEEEEEEEEEEEEEEccccccEEccccccEEEEccccccEEEcccccccccccccEEEcccccEEEEEEcccccEEEEEEEccccEEEEccccccccccccccccccccEEEEEcccccccEEEccccEEEEEEEEEEEEcccccccccccccccccc
ccEEEEEccccccEEEEEcccccEEEEEEEccEEEEEcccccccEEEEcccccccccccEEccccccccccccccccccccccccccEEEEccccccccccccEEEEEEEcccccccccccccEEEEEEEEEccccEEEEEEEEEcccccEEEHHHHHHHEEcccccEEEEEcccccHHHHcccccccEEccccEEEEcccccEEEEccccEEEEEccccccEEEEEEcccccEEEEccHHHHHHHHcccccccccEEEEEEEccccccEEEcccccEEEEEEEEEEEcccccccccHHHEHcccc
mplnivhdkdglpriilteptgssaEVLLYGgqvvswknERREELLFMSsksfwkppkairggipvcfpqfgnlglleqhgfarnrfwsldedasplppannqstVDLILKSTEEDIKAWPRGFELRLRIsispgkltliprvrnvdnKAFSFMFALRNylsvsdisevRVEGLETLDYFDYlmnkerfteqadaitfdgeidrvylstptkiaiIDHEKKRTFelrkdgmpdsvvwnpwdkkakalpdmgvdgykTMLCVdsaaienpivlkpfeewrgrqelstvsssycsgqldprrvlhgfh
mplnivhdkdglpriilteptgssaevlLYGGQVVSWKNERREELLFMssksfwkppkAIRGGIPVCFPQFGNLGLLEQHGFARNRFWSLDEDASPLPPANNQSTVDLILKSTEEDIKAWPRGFELRLrisispgkltliprvrNVDNKAFSFMFALRNylsvsdisevRVEGLETLDYFDYLMNKERFTeqadaitfdgeiDRVYlstptkiaiidhekkrtfelrkdgmpdsvvwnpwdkkakalpdMGVDGYKTMLCVDSAAIENPIVLKPFEEWRGRQELStvsssycsgqldprrvlhgfh
MPLNIVHDKDGLPRIILTEPTGSSAEVLLYGGQVVSWKNERREELLFMSSKSFWKPPKAIRGGIPVCFPQFGNLGLLEQHGFARNRFWSLDEDASPLPPANNQSTVDLILKSTEEDIKAWPRGFELRLRISISPGKLTLIPRVRNVDNKAFSFMFALRNYLSVSDISEVRVEGLETLDYFDYLMNKERFTEQADAITFDGEIDRVYLSTPTKIAIIDHEKKRTFELRKDGMPDSVVWNPWDKKAKALPDMGVDGYKTMLCVDSAAIENPIVLKPFEEWRGRQELSTVSSSYCSGQLDPRRVLHGFH
**************************VLLYGGQVVSWKNERREELLFMSSKSFWKPPKAIRGGIPVCFPQFGNLGLLEQHGFARNRFWSLD**************VDLILKSTEEDIKAWPRGFELRLRISISPGKLTLIPRVRNVDNKAFSFMFALRNYLSVSDISEVRVEGLETLDYFDYLMNKERFTEQADAITFDGEIDRVYLSTPTKIAIIDHEKKRTFELRKDGMPDSVVWNPWDKKAKALPDMGVDGYKTMLCVDSAAIENPIVLKPFEEWRGRQ************************
*PLNIV*DKDGLPRIILTEPTGSSAEVLLYGGQVVSWKNERREELLFMSSKSFWKPPKAIRGGIPVCFPQFGNLGLLEQHGFARNRFWSLDEDASPLPPANNQSTVDLILKSTEEDIKAWPRGFELRLRISISPGKLTLIPRVRNVDNKAFSFMFALRNYLSVSDISEVRVEGLETLDYFDYLMNKERFTEQADAITFDGEIDRVYLSTPTKIAIIDHEKKRTFELRKDGMPDSVVWNPWDKKAKALPDMGVDGYKTMLCVDSAAIENPIVLKPFEEWRGRQELSTVSSSYCSGQLDPRRVLHG**
MPLNIVHDKDGLPRIILTEPTGSSAEVLLYGGQVVSWKNERREELLFMSSKSFWKPPKAIRGGIPVCFPQFGNLGLLEQHGFARNRFWSLDEDASPLPPANNQSTVDLILKSTEEDIKAWPRGFELRLRISISPGKLTLIPRVRNVDNKAFSFMFALRNYLSVSDISEVRVEGLETLDYFDYLMNKERFTEQADAITFDGEIDRVYLSTPTKIAIIDHEKKRTFELRKDGMPDSVVWNPWDKKAKALPDMGVDGYKTMLCVDSAAIENPIVLKPFEEWRGRQELSTVSSSYCSGQLDPRRVLHGFH
MPLNIVHDKDGLPRIILTEPTGSSAEVLLYGGQVVSWKNERREELLFMSSKSFWKPPKAIRGGIPVCFPQFGNLGLLEQHGFARNRFWSLDEDASPLPPANNQSTVDLILKSTEEDIKAWPRGFELRLRISISPGKLTLIPRVRNVDNKAFSFMFALRNYLSVSDISEVRVEGLETLDYFDYLMNKERFTEQADAITFDGEIDRVYLSTPTKIAIIDHEKKRTFELRKDGMPDSVVWNPWDKKAKALPDMGVDGYKTMLCVDSAAIENPIVLKPFEEWRGRQELSTVSSSYCSGQLDPRRVLHGFH
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MPLNIVHDKDGLPRIILTEPTGSSAEVLLYGGQVVSWKNERREELLFMSSKSFWKPPKAIRGGIPVCFPQFGNLGLLEQHGFARNRFWSLDEDASPLPPANNQSTVDLILKSTEEDIKAWPRGFELRLRISISPGKLTLIPRVRNVDNKAFSFMFALRNYLSVSDISEVRVEGLETLDYFDYLMNKERFTEQADAITFDGEIDRVYLSTPTKIAIIDHEKKRTFELRKDGMPDSVVWNPWDKKAKALPDMGVDGYKTMLCVDSAAIENPIVLKPFEEWRGRQELSTVSSSYCSGQLDPRRVLHGFH
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query306 2.2.26 [Sep-21-2011]
Q40784329 Putative glucose-6-phosph N/A no 0.977 0.908 0.629 1e-109
Q03161297 Glucose-6-phosphate 1-epi yes no 0.895 0.922 0.309 5e-31
P39173294 Putative glucose-6-phosph N/A no 0.784 0.816 0.340 7e-24
P44160271 Putative glucose-6-phosph yes no 0.637 0.719 0.262 7e-15
>sp|Q40784|AAPC_CENCI Putative glucose-6-phosphate 1-epimerase OS=Cenchrus ciliaris PE=2 SV=1 Back     alignment and function desciption
 Score =  393 bits (1010), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 192/305 (62%), Positives = 229/305 (75%), Gaps = 6/305 (1%)

Query: 5   IVHDKDGLPRIILTEPTGSSAEVLLYGGQVVSWKNERREELLFMSSKSFWKPPKAIRGGI 64
           +V    GL +++L       AE+ LYGGQV SWKN+  EELLF+SSK+ +KPPKAIRGGI
Sbjct: 26  LVKTPSGLEKVVLRGARNCCAEIYLYGGQVTSWKNDNGEELLFLSSKAIFKPPKAIRGGI 85

Query: 65  PVCFPQFGNLGLLEQHGFARNRFWSLDEDASPLP--PANNQSTVDLILKSTEEDIKAWPR 122
           P+C PQFG  G LEQHGFARNRFWS+D D  PLP  PA  ++ VDLIL+  EED+K WP 
Sbjct: 86  PICLPQFGTHGNLEQHGFARNRFWSIDNDPPPLPVNPAI-KAFVDLILRPAEEDLKIWPH 144

Query: 123 GFELRLRISISP-GKLTLIPRVRNV--DNKAFSFMFALRNYLSVSDISEVRVEGLETLDY 179
            FE RLR+++ P G L+L  R+RN   D + FS+ FA   Y  VSDISEVRVEGLET+DY
Sbjct: 145 SFEFRLRVALGPSGDLSLTSRIRNTNTDGRPFSYTFAYHTYFFVSDISEVRVEGLETMDY 204

Query: 180 FDYLMNKERFTEQADAITFDGEIDRVYLSTPTKIAIIDHEKKRTFELRKDGMPDSVVWNP 239
            D L  KERFTEQ DAI F+ E+D+VYL+ P+KIAIIDHEKK+TF + K+G+PD+VVWNP
Sbjct: 205 LDNLKAKERFTEQGDAIVFESEVDKVYLAAPSKIAIIDHEKKKTFVVTKEGLPDAVVWNP 264

Query: 240 WDKKAKALPDMGVDGYKTMLCVDSAAIENPIVLKPFEEWRGRQELSTVSSSYCSGQLDPR 299
           WDKKAKA+ D G   YK MLCV+ AA+E PI LKP EEWRGR  LS V SSYCSGQLDP 
Sbjct: 265 WDKKAKAMQDFGDAEYKNMLCVEPAAVEKPITLKPGEEWRGRIALSAVPSSYCSGQLDPL 324

Query: 300 RVLHG 304
           +VLHG
Sbjct: 325 KVLHG 329

Cenchrus ciliaris (taxid: 35872)
EC: 5EC: .EC: 1EC: .EC: 3EC: .EC: 1EC: 5
>sp|Q03161|YMY9_YEAST Glucose-6-phosphate 1-epimerase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YMR099C PE=1 SV=1 Back     alignment and function description
>sp|P39173|YEAD_ECOLI Putative glucose-6-phosphate 1-epimerase OS=Escherichia coli (strain K12) GN=yeaD PE=1 SV=2 Back     alignment and function description
>sp|P44160|Y1317_HAEIN Putative glucose-6-phosphate 1-epimerase OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=HI_1317 PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query306
255560932306 aldose 1-epimerase, putative [Ricinus co 1.0 1.0 0.862 1e-154
255560928305 aldose 1-epimerase, putative [Ricinus co 0.993 0.996 0.861 1e-153
224055575306 predicted protein [Populus trichocarpa] 1.0 1.0 0.839 1e-152
225452318306 PREDICTED: putative glucose-6-phosphate 0.996 0.996 0.836 1e-149
297811575306 aldose 1-epimerase family protein [Arabi 0.993 0.993 0.796 1e-144
18417396306 aldose 1-epimerase family protein [Arabi 0.993 0.993 0.792 1e-144
297832784306 aldose 1-epimerase family protein [Arabi 0.993 0.993 0.799 1e-143
28393808306 unknown protein [Arabidopsis thaliana] 0.993 0.993 0.789 1e-143
18395868306 glucose-6-phosphate 1-epimerase [Arabido 0.993 0.993 0.802 1e-143
16612258306 AT3g01590/F4P13_13 [Arabidopsis thaliana 0.993 0.993 0.799 1e-142
>gi|255560932|ref|XP_002521479.1| aldose 1-epimerase, putative [Ricinus communis] gi|223539378|gb|EEF40969.1| aldose 1-epimerase, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  549 bits (1415), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 264/306 (86%), Positives = 280/306 (91%)

Query: 1   MPLNIVHDKDGLPRIILTEPTGSSAEVLLYGGQVVSWKNERREELLFMSSKSFWKPPKAI 60
           MPLNIV+D DGLP+IILTEPTGSSAEVLLYGGQVVSWKNERREELLFMS+K+  K PKAI
Sbjct: 1   MPLNIVNDVDGLPKIILTEPTGSSAEVLLYGGQVVSWKNERREELLFMSTKAVLKAPKAI 60

Query: 61  RGGIPVCFPQFGNLGLLEQHGFARNRFWSLDEDASPLPPANNQSTVDLILKSTEEDIKAW 120
           RGGIPVCFPQFGNLG LEQHGFARN+ WSLD D  PLPP NNQS+VDLILKSTEED+K W
Sbjct: 61  RGGIPVCFPQFGNLGSLEQHGFARNKLWSLDSDPLPLPPVNNQSSVDLILKSTEEDLKTW 120

Query: 121 PRGFELRLRISISPGKLTLIPRVRNVDNKAFSFMFALRNYLSVSDISEVRVEGLETLDYF 180
           PR FELRLRISISPGKLTLIPRVRN DNKAFSF FAL NYLSVSDISEVR+EGLETLDYF
Sbjct: 121 PRSFELRLRISISPGKLTLIPRVRNTDNKAFSFTFALCNYLSVSDISEVRIEGLETLDYF 180

Query: 181 DYLMNKERFTEQADAITFDGEIDRVYLSTPTKIAIIDHEKKRTFELRKDGMPDSVVWNPW 240
           D LM +ERFTEQADAITFD EIDR+YLSTPTKIAIIDHEKKRTF LRKDG+PD+VVWNPW
Sbjct: 181 DNLMQRERFTEQADAITFDAEIDRIYLSTPTKIAIIDHEKKRTFVLRKDGLPDAVVWNPW 240

Query: 241 DKKAKALPDMGVDGYKTMLCVDSAAIENPIVLKPFEEWRGRQELSTVSSSYCSGQLDPRR 300
           DKKAKAL D+G D YKTMLCVDSAAIE PIVLKPFEEW+G QELSTVSSSYCSGQLDP +
Sbjct: 241 DKKAKALQDLGDDDYKTMLCVDSAAIETPIVLKPFEEWKGHQELSTVSSSYCSGQLDPGK 300

Query: 301 VLHGFH 306
           VL+GF 
Sbjct: 301 VLYGFQ 306

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255560928|ref|XP_002521477.1| aldose 1-epimerase, putative [Ricinus communis] gi|223539376|gb|EEF40967.1| aldose 1-epimerase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|224055575|ref|XP_002298547.1| predicted protein [Populus trichocarpa] gi|222845805|gb|EEE83352.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|225452318|ref|XP_002272928.1| PREDICTED: putative glucose-6-phosphate 1-epimerase [Vitis vinifera] gi|296087598|emb|CBI34854.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|297811575|ref|XP_002873671.1| aldose 1-epimerase family protein [Arabidopsis lyrata subsp. lyrata] gi|297319508|gb|EFH49930.1| aldose 1-epimerase family protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|18417396|ref|NP_568301.1| aldose 1-epimerase family protein [Arabidopsis thaliana] gi|58743290|gb|AAW81723.1| At5g14500 [Arabidopsis thaliana] gi|108385311|gb|ABF85771.1| At5g14500 [Arabidopsis thaliana] gi|332004658|gb|AED92041.1| aldose 1-epimerase family protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297832784|ref|XP_002884274.1| aldose 1-epimerase family protein [Arabidopsis lyrata subsp. lyrata] gi|297330114|gb|EFH60533.1| aldose 1-epimerase family protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|28393808|gb|AAO42313.1| unknown protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|18395868|ref|NP_566143.1| glucose-6-phosphate 1-epimerase [Arabidopsis thaliana] gi|30678376|ref|NP_850493.1| glucose-6-phosphate 1-epimerase [Arabidopsis thaliana] gi|6016717|gb|AAF01543.1|AC009325_13 unknown protein [Arabidopsis thaliana] gi|15810277|gb|AAL07026.1| unknown protein [Arabidopsis thaliana] gi|20258973|gb|AAM14202.1| unknown protein [Arabidopsis thaliana] gi|21593681|gb|AAM65648.1| unknown [Arabidopsis thaliana] gi|332640171|gb|AEE73692.1| glucose-6-phosphate 1-epimerase [Arabidopsis thaliana] gi|332640172|gb|AEE73693.1| glucose-6-phosphate 1-epimerase [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|16612258|gb|AAL27499.1|AF439827_1 AT3g01590/F4P13_13 [Arabidopsis thaliana] gi|23308359|gb|AAN18149.1| At3g01590/F4P13_13 [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query306
TAIR|locus:2145748306 AT5G14500 [Arabidopsis thalian 0.993 0.993 0.792 6.9e-134
TAIR|locus:2084233306 AT3G01590 [Arabidopsis thalian 0.993 0.993 0.802 1.1e-133
TAIR|locus:2165580312 AT5G57330 [Arabidopsis thalian 0.957 0.939 0.643 1.1e-101
TAIR|locus:2082842317 AT3G61610 [Arabidopsis thalian 0.957 0.924 0.557 3e-92
TAIR|locus:2128519306 AT4G23730 [Arabidopsis thalian 0.941 0.941 0.558 2e-88
TAIR|locus:2117572318 AT4G25900 [Arabidopsis thalian 0.905 0.871 0.517 1.5e-76
ASPGD|ASPL0000045178315 AN10222 [Emericella nidulans ( 0.866 0.841 0.375 2e-40
UNIPROTKB|G4N684326 MGG_08597 "Uncharacterized pro 0.676 0.634 0.318 5.1e-39
UNIPROTKB|Q9KQJ7296 VC_2001 "Putative uncharacteri 0.797 0.824 0.371 8.9e-38
TIGR_CMR|VC_2001296 VC_2001 "conserved hypothetica 0.797 0.824 0.371 8.9e-38
TAIR|locus:2145748 AT5G14500 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1312 (466.9 bits), Expect = 6.9e-134, P = 6.9e-134
 Identities = 241/304 (79%), Positives = 275/304 (90%)

Query:     1 MPLNIVHDKDGLPRIILTEPTGSSAEVLLYGGQVVSWKNERREELLFMSSKSFWKPPKAI 60
             MPLN+V+D+DG  RI+LT+P GS+AEVLLYGGQVVSWKNERRE+LL+MS+K+  KPPKAI
Sbjct:     1 MPLNVVNDRDGSSRILLTDPAGSTAEVLLYGGQVVSWKNERREKLLYMSTKAQLKPPKAI 60

Query:    61 RGGIPVCFPQFGNLGLLEQHGFARNRFWSLDEDASPLPPANNQSTVDLILKSTEEDIKAW 120
             RGG+P+ FPQFGN G LE+HGFARNRFWSLD D SPLPPAN QSTVDL+LKSTE+D+K W
Sbjct:    61 RGGLPISFPQFGNFGALERHGFARNRFWSLDNDPSPLPPANQQSTVDLVLKSTEDDLKIW 120

Query:   121 PRGFELRLRISISPGKLTLIPRVRNVDNKAFSFMFALRNYLSVSDISEVRVEGLETLDYF 180
             P  FELR+RISISPGKLT+IPRVRN D KAFSFMF+LRNYL VSDISEVRVEGLETLDY 
Sbjct:   121 PHSFELRVRISISPGKLTIIPRVRNTDTKAFSFMFSLRNYLYVSDISEVRVEGLETLDYL 180

Query:   181 DYLMNKERFTEQADAITFDGEIDRVYLSTPTKIAIIDHEKKRTFELRKDGMPDSVVWNPW 240
             D LM +ERFTEQADAITFDGE+D+VYL+TPTKIAIIDHE+KRT ELRK+GMP++ VWNPW
Sbjct:   181 DNLMRRERFTEQADAITFDGEVDKVYLNTPTKIAIIDHERKRTIELRKEGMPNAAVWNPW 240

Query:   241 DKKAKALPDMGVDGYKTMLCVDSAAIENPIVLKPFEEWRGRQELSTVSSSYCSGQLDPRR 300
             DKKAK++ DMG + Y TMLCVDS AIE+PIVLKP EEW+GRQELS VSSSYCSGQLDPR+
Sbjct:   241 DKKAKSIADMGDEDYTTMLCVDSGAIESPIVLKPHEEWKGRQELSIVSSSYCSGQLDPRK 300

Query:   301 VLHG 304
             VL+G
Sbjct:   301 VLYG 304
GO:0003824 "catalytic activity" evidence=IEA
GO:0004034 "aldose 1-epimerase activity" evidence=ISS
GO:0005634 "nucleus" evidence=ISM
GO:0005975 "carbohydrate metabolic process" evidence=IEA
GO:0006012 "galactose metabolic process" evidence=ISS
GO:0016853 "isomerase activity" evidence=IEA
GO:0030246 "carbohydrate binding" evidence=IEA
GO:0000394 "RNA splicing, via endonucleolytic cleavage and ligation" evidence=RCA
GO:0009086 "methionine biosynthetic process" evidence=RCA
TAIR|locus:2084233 AT3G01590 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2165580 AT5G57330 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2082842 AT3G61610 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2128519 AT4G23730 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2117572 AT4G25900 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
ASPGD|ASPL0000045178 AN10222 [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms
UNIPROTKB|G4N684 MGG_08597 "Uncharacterized protein" [Magnaporthe oryzae 70-15 (taxid:242507)] Back     alignment and assigned GO terms
UNIPROTKB|Q9KQJ7 VC_2001 "Putative uncharacterized protein" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)] Back     alignment and assigned GO terms
TIGR_CMR|VC_2001 VC_2001 "conserved hypothetical protein" [Vibrio cholerae O1 biovar El Tor (taxid:686)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q40784AAPC_CENCI5, ., 1, ., 3, ., 1, 50.62950.97710.9088N/Ano
Q03161YMY9_YEAST5, ., 1, ., 3, ., 1, 50.30970.89540.9225yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer5.1.3.3LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
fgenesh4_pm.C_LG_I000875
hypothetical protein (306 aa)
(Populus trichocarpa)
Predicted Functional Partners:
gw1.VIII.2574.1
glucose-6-phosphate isomerase (EC-5.3.1.9) (569 aa)
     •  0.899
gw1.II.3030.1
glucose-6-phosphate isomerase (EC-5.3.1.9) (542 aa)
     •  0.899
fgenesh4_pm.C_LG_I000617
hexokinase (508 aa)
     •  0.899
fgenesh4_pg.C_LG_VII001238
hexokinase (EC-2.7.1.2) (502 aa)
     •  0.899
fgenesh4_pg.C_LG_IX001086
hexokinase (508 aa)
     •  0.899
eugene3.00121193
phosphoglucomutase (EC-5.4.2.2) (631 aa)
     •  0.899
estExt_fgenesh4_pm.C_LG_VIII0571
phosphoglucomutase (EC-5.4.2.2) (582 aa)
     •  0.899
estExt_fgenesh4_pg.C_LG_XVIII0751
hexokinase (EC-2.7.1.1) (498 aa)
     •  0.899
estExt_fgenesh4_pg.C_LG_XV1054
phosphoglucomutase (EC-5.4.2.2) (551 aa)
     •  0.899
estExt_fgenesh4_pg.C_LG_X0989
phosphoglucomutase (EC-5.4.2.2) (582 aa)
     •  0.899

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query306
cd09020269 cd09020, D-hex-6-P-epi_like, D-hexose-6-phosphate 1e-119
COG0676287 COG0676, COG0676, Uncharacterized enzymes related 2e-60
pfam01263301 pfam01263, Aldose_epim, Aldose 1-epimerase 3e-60
cd09025271 cd09025, Aldose_epim_Slr1438, Aldose 1-epimerase, 7e-27
cd09024288 cd09024, Aldose_epim_lacX, Aldose 1-epimerase, sim 7e-08
cd01081284 cd01081, Aldose_epim, aldose 1-epimerase superfami 2e-07
COG2017308 COG2017, GalM, Galactose mutarotase and related en 9e-06
>gnl|CDD|185697 cd09020, D-hex-6-P-epi_like, D-hexose-6-phosphate epimerase-like Back     alignment and domain information 
 Score =  342 bits (880), Expect = e-119
 Identities = 121/275 (44%), Positives = 160/275 (58%), Gaps = 9/275 (3%)

Query: 14  RIILTEPTGSSAEVLLYGGQVVSWKNERREELLFMSSKSFWKPPKAIRGGIPVCFPQFGN 73
            I+L  P G+SAE+ L G QV+SWK +  ++LL++S ++ +   KAIRGGIPVC+P FG 
Sbjct: 1   AIVLDHP-GASAEIALQGAQVLSWKPKGGQDLLWLSPQAPFDGGKAIRGGIPVCWPWFGP 59

Query: 74  LG---LLEQHGFARNRFWSLDEDASPLPPANNQSTVDLILKSTEEDIKAWPRGFELRLRI 130
            G    L  HGFAR R W L E +       +  TV L L  T+E    WP  FELRL +
Sbjct: 60  HGPNADLPAHGFARTRLWELLEVSED----EDGVTVSLELDDTDETRAIWPHAFELRLTV 115

Query: 131 SISPGKLTLIPRVRNVDNKAFSFMFALRNYLSVSDISEVRVEGLETLDYFDYLMNKERFT 190
           ++    L L   V N  +K FSF  AL  Y  VSDI +VRVEGLE   Y D L ++    
Sbjct: 116 TLGFDTLELELTVTNTGDKPFSFTAALHTYFRVSDIEQVRVEGLEGATYLDKLTDQRE-K 174

Query: 191 EQADAITFDGEIDRVYLSTPTKIAIIDHEKKRTFELRKDGMPDSVVWNPWDKKAKALPDM 250
            Q  A+TFDGE+DRVYL+TP  + I D    R   + K G P +VVWNPW +KA  + D 
Sbjct: 175 VQGGAVTFDGEVDRVYLNTPAPLTIDDPAWGRRIRIEKSGSPSAVVWNPWIEKAARMADF 234

Query: 251 GVDGYKTMLCVDSAAIENPIVLKPFEEWRGRQELS 285
             DGY+ M+CV++A + +P+ L P E     Q +S
Sbjct: 235 PDDGYRRMVCVEAANVADPVTLAPGESHTLSQTIS 269

D-Hexose-6-phosphate epimerase Ymr099c from Saccharomyces cerevisiae belongs to the large superfamily of aldose-1-epimerases. Its active site is very similar to the catalytic site of galactose mutarotase, the best studied member of the superfamily. It also contains the conserved glutamate and histidine residues that have been shown in galactose mutarotase to be critical for catalysis, the glutamate serving as the active site base to initiate the reaction by removing the proton from the C-1 hydroxyl group of the sugar substrate, and the histidine as the active site acid to protonate the C-5 ring oxygen. In addition Ymr099c contains 2 conserved arginine residues which are involved in phosphate binding, and exhibits hexose-6-phosphate mutarotase activity on glucose-6-P, galactose-6-P and mannose-6-P. Length = 269
>gnl|CDD|223748 COG0676, COG0676, Uncharacterized enzymes related to aldose 1-epimerase [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|216397 pfam01263, Aldose_epim, Aldose 1-epimerase Back     alignment and domain information
>gnl|CDD|185702 cd09025, Aldose_epim_Slr1438, Aldose 1-epimerase, similar to Synechocystis Slr1438 Back     alignment and domain information
>gnl|CDD|185701 cd09024, Aldose_epim_lacX, Aldose 1-epimerase, similar to Lactococcus lactis lacX Back     alignment and domain information
>gnl|CDD|185695 cd01081, Aldose_epim, aldose 1-epimerase superfamily Back     alignment and domain information
>gnl|CDD|224928 COG2017, GalM, Galactose mutarotase and related enzymes [Carbohydrate transport and metabolism] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 306
KOG1594305 consensus Uncharacterized enzymes related to aldos 100.0
cd09020269 D-hex-6-P-epi_like D-hexose-6-phosphate epimerase- 100.0
COG0676287 Uncharacterized enzymes related to aldose 1-epimer 100.0
cd09025271 Aldose_epim_Slr1438 Aldose 1-epimerase, similar to 100.0
cd09024288 Aldose_epim_lacX Aldose 1-epimerase, similar to La 100.0
cd09021273 Aldose_epim_Ec_YphB aldose 1-epimerase, similar to 100.0
PRK15172300 putative aldose-1-epimerase; Provisional 100.0
cd01081284 Aldose_epim aldose 1-epimerase superfamily. Aldose 100.0
cd09022284 Aldose_epim_Ec_YihR Aldose 1-epimerase, similar to 100.0
PF01263300 Aldose_epim: Aldose 1-epimerase; InterPro: IPR0081 100.0
cd09019326 galactose_mutarotase_like galactose mutarotase_lik 100.0
COG2017308 GalM Galactose mutarotase and related enzymes [Car 100.0
PLN00194337 aldose 1-epimerase; Provisional 100.0
TIGR02636335 galM_Leloir galactose mutarotase. Members of this 100.0
PRK11055342 galM galactose-1-epimerase; Provisional 99.98
PTZ00485376 aldolase 1-epimerase; Provisional 99.97
KOG1604353 consensus Predicted mutarotase [Carbohydrate trans 99.91
cd09023284 Aldose_epim_Ec_c4013 Aldose 1-epimerase, similar t 99.85
PF14486302 DUF4432: Domain of unknown function (DUF4432); PDB 99.4
cd09269293 deoxyribose_mutarotase deoxyribose mutarotase_like 99.37
PF14315274 DUF4380: Domain of unknown function (DUF4380) 98.15
PF09095278 DUF1926: Domain of unknown function (DUF1926); Int 95.27
TIGR03593366 yidC_nterm membrane protein insertase, YidC/Oxa1 f 93.91
PF14849270 YidC_periplas: YidC periplasmic domain; PDB: 3BS6_ 93.62
PRK01318 521 membrane protein insertase; Provisional 93.17
PF00699100 Urease_beta: Urease beta subunit CAUTION: The Pros 82.06
cd00407101 Urease_beta Urease beta-subunit; Urease is a nicke 81.91
TIGR00192101 urease_beta urease, beta subunit. In a number of s 81.71
>KOG1594 consensus Uncharacterized enzymes related to aldose 1-epimerase [Carbohydrate transport and metabolism] Back     alignment and domain information 
Probab=100.00  E-value=3.7e-70  Score=463.96  Aligned_cols=294  Identities=67%  Similarity=1.182  Sum_probs=279.7

Q ss_pred             CCeeeecCCCCccEEEEECCCccEEEEecCCeEEEEEEeCCCeeeEEecCCCCCCCCCcccCcccEEccccCCCCCCCCc
Q 021879            1 MPLNIVHDKDGLPRIILTEPTGSSAEVLLYGGQVVSWKNERREELLFMSSKSFWKPPKAIRGGIPVCFPQFGNLGLLEQH   80 (306)
Q Consensus         1 ~~~~~~~~~~~~~~~~L~~~~~~~a~v~~~Ga~l~s~~~~~g~e~L~~~~~~~~~~~~~irgg~p~lfP~~gr~~~~~~H   80 (306)
                      |++.++++.+|++.+.|++++|.+|+|..+||+|+||+..+|+|+||.+..+.+++.+|||||+|+|||+||....+++|
T Consensus        12 ~~~~~~k~~~g~~~ivL~~p~g~taev~L~Gg~V~SWK~~~geElLf~S~kA~f~ppKpIRGGIP~~FPQFG~~g~l~qH   91 (305)
T KOG1594|consen   12 MPVELAKGRNGLDKIVLTDPRGSTAEVYLYGGQVVSWKNENGEELLFVSTKAIFKPPKPIRGGIPICFPQFGNFGSLPQH   91 (305)
T ss_pred             ccceeecccCCCceEEEeCCCCCeEEEEEeccEEEEeecCCCceeEEechhhhcCCCCcccCCcceEeeccCCCCccccc
Confidence            57888999999999999999999999999999999999977999999999999999999999999999999999999999


Q ss_pred             eEEeccCcEEEeeCCCCCCCCCccEEEEEecCChhhhccCCCceEEEEEEEEeCCeEEEEEEEEeCCCCceeeeeecccc
Q 021879           81 GFARNRFWSLDEDASPLPPANNQSTVDLILKSTEEDIKAWPRGFELRLRISISPGKLTLIPRVRNVDNKAFSFMFALRNY  160 (306)
Q Consensus        81 Gfar~~~W~v~~~~~~~~~~~~~~~v~l~l~~~~~~~~~~P~~f~l~~~y~L~~~~L~i~~~v~N~~~~~~p~~~g~HpY  160 (306)
                      ||||++.|.++....+++ ..+...|.|.|.+++++++.||++|++++++.|.++.|+++.+|+|++++++.|++++|+|
T Consensus        92 GFaRn~~W~v~~~p~~lp-~~~~a~Vdl~Lk~~~~~~kiWp~~Fe~~lrv~l~~g~Lt~~~rV~Ntd~KpFsF~~alHtY  170 (305)
T KOG1594|consen   92 GFARNRFWEVENNPPPLP-SLGKATVDLILKSSEDDLKIWPHSFELRLRVSLGDGELTLTSRVRNTDSKPFSFSFALHTY  170 (305)
T ss_pred             ccccceeeEeccCCCCCC-cCCceeEEEEecCChhhhhhCCcceEEEEEEEEcCCceEEEEEeecCCCCceEEEeEeeee
Confidence            999999999998765444 3346889999999999999999999999999999999999999999999999999999999


Q ss_pred             ccCCCcceEEEeccCCCccccccccccceeccCceeeecCccCeEEeCCCCeEEEEeCCCCcEEEEEecCCCcEEEeCCc
Q 021879          161 LSVSDISEVRVEGLETLDYFDYLMNKERFTEQADAITFDGEIDRVYLSTPTKIAIIDHEKKRTFELRKDGMPDSVVWNPW  240 (306)
Q Consensus       161 F~~~~~~~~~~~~~~~~~~~d~l~~~~~~~~~~~~~~~~~~~D~~y~~~~~~~~l~~~~~~~~l~v~~~~~~~~vvw~p~  240 (306)
                      |.++|+.+++++|++++.|+|++....++.++++.++|.+++|++|++.+.++.|.|...+|+|.+..+++|+.||||||
T Consensus       171 f~vsdisevrveGL~tldylD~~~~~~~~tE~~davTF~~e~DrvYl~tp~e~aI~dh~~krti~l~k~g~pDaVVWNPW  250 (305)
T KOG1594|consen  171 FRVSDISEVRVEGLETLDYLDNLKNRERFTEQRDAVTFNSEVDRVYLNTPTELAIFDHEKKRTIVLKKEGLPDAVVWNPW  250 (305)
T ss_pred             EeecccceEEEeccccccccccccchhhccccCceEeeccceeeEEecCCceEEEEEeccccEEEEeccCCCceEEeChh
Confidence            99999999999999999999988777788888999999999999999999999999999999999999999999999999


Q ss_pred             ccccccCCCCCCCCCcceEEeceeeecCCeEeCCCCEEEEEEEEEEEecCCCCCC
Q 021879          241 DKKAKALPDMGVDGYKTMLCVDSAAIENPIVLKPFEEWRGRQELSTVSSSYCSGQ  295 (306)
Q Consensus       241 ~~~~~~~~d~~~~~~~~~vCvEp~~~~g~~~L~pGe~~~~~~~i~~~~~~~~~~~  295 (306)
                      .++++.|+||++++|++|+|||++.+...++|+|||+|++++.+.+..+++||+|
T Consensus       251 ~kksk~maD~gde~Y~~mlCVe~a~v~~pI~L~PG~eW~g~q~Lsiv~s~~~s~q  305 (305)
T KOG1594|consen  251 DKKSKTMADFGDEDYKHMLCVESAAVESPITLKPGEEWKGRQLLSIVPSSYCSGQ  305 (305)
T ss_pred             HhhhhhhhhccccccceeEEecccccCCceeecCCccceeEEEEEEeecccccCC
Confidence            9999999999999999999999999999999999999999999999999999876

>cd09020 D-hex-6-P-epi_like D-hexose-6-phosphate epimerase-like Back     alignment and domain information
>COG0676 Uncharacterized enzymes related to aldose 1-epimerase [Carbohydrate transport and metabolism] Back     alignment and domain information
>cd09025 Aldose_epim_Slr1438 Aldose 1-epimerase, similar to Synechocystis Slr1438 Back     alignment and domain information
>cd09024 Aldose_epim_lacX Aldose 1-epimerase, similar to Lactococcus lactis lacX Back     alignment and domain information
>cd09021 Aldose_epim_Ec_YphB aldose 1-epimerase, similar to Escherichia coli YphB Back     alignment and domain information
>PRK15172 putative aldose-1-epimerase; Provisional Back     alignment and domain information
>cd01081 Aldose_epim aldose 1-epimerase superfamily Back     alignment and domain information
>cd09022 Aldose_epim_Ec_YihR Aldose 1-epimerase, similar to Escherichia coli YihR Back     alignment and domain information
>PF01263 Aldose_epim: Aldose 1-epimerase; InterPro: IPR008183 Aldose 1-epimerase (5 Back     alignment and domain information
>cd09019 galactose_mutarotase_like galactose mutarotase_like Back     alignment and domain information
>COG2017 GalM Galactose mutarotase and related enzymes [Carbohydrate transport and metabolism] Back     alignment and domain information
>PLN00194 aldose 1-epimerase; Provisional Back     alignment and domain information
>TIGR02636 galM_Leloir galactose mutarotase Back     alignment and domain information
>PRK11055 galM galactose-1-epimerase; Provisional Back     alignment and domain information
>PTZ00485 aldolase 1-epimerase; Provisional Back     alignment and domain information
>KOG1604 consensus Predicted mutarotase [Carbohydrate transport and metabolism] Back     alignment and domain information
>cd09023 Aldose_epim_Ec_c4013 Aldose 1-epimerase, similar to Escherichia coli c4013 Back     alignment and domain information
>PF14486 DUF4432: Domain of unknown function (DUF4432); PDB: 3TY1_A Back     alignment and domain information
>cd09269 deoxyribose_mutarotase deoxyribose mutarotase_like Back     alignment and domain information
>PF14315 DUF4380: Domain of unknown function (DUF4380) Back     alignment and domain information
>PF09095 DUF1926: Domain of unknown function (DUF1926); InterPro: IPR015179 Alpha-amylase is classified as family 13 of the glycosyl hydrolases and is present in archaea, bacteria, plants and animals Back     alignment and domain information
>TIGR03593 yidC_nterm membrane protein insertase, YidC/Oxa1 family, N-terminal domain Back     alignment and domain information
>PF14849 YidC_periplas: YidC periplasmic domain; PDB: 3BS6_B 3BLC_B Back     alignment and domain information
>PRK01318 membrane protein insertase; Provisional Back     alignment and domain information
>PF00699 Urease_beta: Urease beta subunit CAUTION: The Prosite patterns do not match this subunit of the enzyme; InterPro: IPR002019 Urease 3 Back     alignment and domain information
>cd00407 Urease_beta Urease beta-subunit; Urease is a nickel-dependent metalloenzyme that catalyzes the hydrolysis of urea to form ammonia and carbon dioxide Back     alignment and domain information
>TIGR00192 urease_beta urease, beta subunit Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query306
2ciq_A297 Structure-Based Functional Annotation: Yeast Ymr099 4e-32
2cir_A297 Structure-Based Functional Annotation: Yeast Ymr099 4e-32
2hta_A309 Crystal Structure Of A Putative Mutarotase (Yead) F 7e-26
1jov_A270 Crystal Structure Analysis Of Hi1317 Length = 270 1e-20
3k25_A289 Crystal Structure Of Slr1438 Protein From Synechocy 3e-09
>pdb|2CIQ|A Chain A, Structure-Based Functional Annotation: Yeast Ymr099c Codes For A D-Hexose-6-Phosphate Mutarotase Length = 297 Back     alignment and structure 
Iteration: 1

 Score =  135 bits (339), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 92/297 (30%), Positives = 141/297 (47%), Gaps = 23/297 (7%)
Query: 14  RIILTEPT--GSSAEVLLYGGQVVSWKNERREELLFMSSKSFWKPPKAIRGGIPVCFPQF 71
            ++LT P    +S  +L YG  V SWK  + EE L++S+ +     K +RGGIP+ FP F
Sbjct: 9   EVVLTHPADETTSVHILKYGATVYSWK-LKSEEQLWLSTAAKLDGSKPVRGGIPLVFPVF 67
Query: 72  G------NLGLLEQHGFARNRFWSLDEDASPLPPANNQSTVDLILK---STEEDIKAWPR 122
           G      +L  L QHG ARN  W         PP     TV   LK   +  E  K WP 
Sbjct: 68  GKNSTDEHLSKLPQHGLARNSTWEFLGQTKENPP-----TVQFGLKPEIANPELTKLWPM 122
Query: 123 GFELRLRISISPGKLTLIPRVRNVDN-KAFSFMFALRNYLSVSDISEVRVEGLETLDYFD 181
            + L L + +    L     V N  + K   F +    Y  + DI    V  L  +  +D
Sbjct: 123 DYLLILTVELGSDYLKTAIEVENTSSSKELKFNWLFHTYFRIEDIEGTMVSNLAGMKLYD 182
Query: 182 YLMNKERFTEQADAITFDGEIDRVY--LSTPTKIAIIDHEKKRTFELRKDGMPDSVVWNP 239
            L+ KE + ++   +TF+ E D +Y  +S    I I+D +  +   L++  +PD+VVWNP
Sbjct: 183 QLL-KESYVDKHPVVTFNQETDVIYQNVSAERAIQIVD-KGVQIHTLKRYNLPDTVVWNP 240
Query: 240 WDKKAKALPDMG-VDGYKTMLCVDSAAIENPIVLKPFEEWRGRQELSTVSSSYCSGQ 295
           W +K++ + D     GY+ M+C++   + + I L P ++W   Q L      Y + Q
Sbjct: 241 WIEKSQGMADFEPKTGYQQMICIEPGHVHDFISLAPGKKWNAYQLLCKEELKYQAIQ 297
>pdb|2CIR|A Chain A, Structure-Based Functional Annotation: Yeast Ymr099c Codes For A D-Hexose-6-Phosphate Mutarotase. Complex With Glucose-6-Phosphate Length = 297 Back     alignment and structure
>pdb|2HTA|A Chain A, Crystal Structure Of A Putative Mutarotase (Yead) From Salmonella Typhimurium In Orthorhombic Form Length = 309 Back     alignment and structure
>pdb|1JOV|A Chain A, Crystal Structure Analysis Of Hi1317 Length = 270 Back     alignment and structure
>pdb|3K25|A Chain A, Crystal Structure Of Slr1438 Protein From Synechocystis Sp. Pcc 6803, Northeast Structural Genomics Consortium Target Sgr112 Length = 289 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query306
2cir_A297 Hexose-6-phosphate mutarotase; hypothetical protei 1e-100
2hta_A309 Putative enzyme related to aldose 1-epimerase; car 4e-94
1jov_A270 HI1317; hypothetical protein, structure 2 function 7e-73
3k25_A289 SLR1438 protein; structural genomics, PSI-2, prote 1e-71
3dcd_A307 Galactose mutarotase related enzyme; Q5FKD7 LAR33 3e-37
3q1n_A294 Galactose mutarotase related enzyme; structural ge 2e-35
3nre_A291 Aldose 1-epimerase; structural genomics, joint cen 9e-13
3os7_A341 Galactose mutarotase-like protein; structural geno 2e-12
3mwx_A326 Aldose 1-epimerase; structural genomics, joint cen 4e-09
>2cir_A Hexose-6-phosphate mutarotase; hypothetical protein, isomerase; HET: BG6; 1.60A {Saccharomyces cerevisiae} PDB: 2ciq_A* 2cis_A* Length = 297 Back     alignment and structure
 Score =  294 bits (753), Expect = e-100
 Identities = 91/309 (29%), Positives = 139/309 (44%), Gaps = 26/309 (8%)

Query: 1   MPLNIVHDKDGLPRIILTEPTGS--SAEVLLYGGQVVSWKNERREELLFMSSKSFWKPPK 58
           MP+     K+    ++LT P     S  +L YG  V SWK  + EE L++S+ +     K
Sbjct: 1   MPI-----KETDKEVVLTHPADETTSVHILKYGATVYSWKL-KSEEQLWLSTAAKLDGSK 54

Query: 59  AIRGGIPVCFPQFGNL------GLLEQHGFARNRFWSLDEDASPLPPANNQSTVDLILK- 111
            +RGGIP+ FP FG          L QHG ARN  W             N  TV   LK 
Sbjct: 55  PVRGGIPLVFPVFGKNSTDEHLSKLPQHGLARNSTWEFLGQ-----TKENPPTVQFGLKP 109

Query: 112 --STEEDIKAWPRGFELRLRISISPGKLTLIPRVRNVD-NKAFSFMFALRNYLSVSDISE 168
             +  E  K WP  + L L + +    L     V N   +K   F +    Y  + DI  
Sbjct: 110 EIANPELTKLWPMDYLLILTVELGSDYLKTAIEVENTSSSKELKFNWLFHTYFRIEDIEG 169

Query: 169 VRVEGLETLDYFDYLMNKERFTEQADAITFDGEIDRVYLSTPTKIAIIDHE-KKRTFELR 227
             V  L  +  +D L  KE + ++   +TF+ E D +Y +   + AI   +   +   L+
Sbjct: 170 TMVSNLAGMKLYDQL-LKESYVDKHPVVTFNQETDVIYQNVSAERAIQIVDKGVQIHTLK 228

Query: 228 KDGMPDSVVWNPWDKKAKALPDMG-VDGYKTMLCVDSAAIENPIVLKPFEEWRGRQELST 286
           +  +PD+VVWNPW +K++ + D     GY+ M+C++   + + I L P ++W   Q L  
Sbjct: 229 RYNLPDTVVWNPWIEKSQGMADFEPKTGYQQMICIEPGHVHDFISLAPGKKWNAYQLLCK 288

Query: 287 VSSSYCSGQ 295
               Y + Q
Sbjct: 289 EELKYQAIQ 297
>2hta_A Putative enzyme related to aldose 1-epimerase; carbohydrate, MU YEAD, GALM, sugar phosphate, isomerase; 1.90A {Salmonella typhimurium} PDB: 2htb_A Length = 309 Back     alignment and structure
>1jov_A HI1317; hypothetical protein, structure 2 function project, S2F, structural genomics, unknown function; 1.57A {Haemophilus influenzae} SCOP: b.30.5.7 Length = 270 Back     alignment and structure
>3k25_A SLR1438 protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, SGR112, P73504_SYNY3; 2.55A {Synechocystis SP} Length = 289 Back     alignment and structure
>3dcd_A Galactose mutarotase related enzyme; Q5FKD7 LAR33 NESG X-RAY, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Lactobacillus acidophilus} Length = 307 Back     alignment and structure
>3q1n_A Galactose mutarotase related enzyme; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE; 1.61A {Lactobacillus casei} Length = 294 Back     alignment and structure
>3nre_A Aldose 1-epimerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, isomerase; HET: MSE; 1.59A {Escherichia coli} Length = 291 Back     alignment and structure
>3os7_A Galactose mutarotase-like protein; structural genomics, joint center for structural genomics, J protein structure initiative; HET: PG4 TLA; 1.80A {Clostridium acetobutylicum} Length = 341 Back     alignment and structure
>3mwx_A Aldose 1-epimerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, isomerase; HET: MSE; 1.45A {Bacillus subtilis} Length = 326 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query306
2cir_A297 Hexose-6-phosphate mutarotase; hypothetical protei 100.0
2hta_A309 Putative enzyme related to aldose 1-epimerase; car 100.0
3k25_A289 SLR1438 protein; structural genomics, PSI-2, prote 100.0
1jov_A270 HI1317; hypothetical protein, structure 2 function 100.0
3q1n_A294 Galactose mutarotase related enzyme; structural ge 100.0
3dcd_A307 Galactose mutarotase related enzyme; Q5FKD7 LAR33 100.0
3mwx_A326 Aldose 1-epimerase; structural genomics, joint cen 100.0
3nre_A291 Aldose 1-epimerase; structural genomics, joint cen 100.0
3os7_A341 Galactose mutarotase-like protein; structural geno 100.0
1yga_A342 Hypothetical 37.9 kDa protein in BIO3-HXT17 interg 100.0
1snz_A344 Aldose 1-epimerase; mutarotase, galactosemia, isom 100.0
1nsx_A347 Galactose mutarotase; epimerase, galactose metabol 100.0
1lur_A339 Aldose 1-epimerase; vitamin B12, methyltransferase 100.0
3imh_A338 Galactose-1-epimerase; structural genomics, PSI-2, 100.0
1z45_A699 GAL10 bifunctional protein; epimerase, mutarotase, 100.0
3ty1_A384 Hypothetical aldose 1-epimerase; supersandwich, st 99.92
3bs6_A280 Inner membrane protein OXAA; YIDC/OXA1/ALB3 family 94.55
3blc_A330 Inner membrane protein OXAA; YIDC, membrane assemb 93.8
4ep8_B101 Urease subunit beta; alpha-beta barrel, nickel met 84.57
>2cir_A Hexose-6-phosphate mutarotase; hypothetical protein, isomerase; HET: BG6; 1.60A {Saccharomyces cerevisiae} PDB: 2ciq_A* 2cis_A* Back     alignment and structure
Probab=100.00  E-value=1e-53  Score=388.30  Aligned_cols=271  Identities=32%  Similarity=0.621  Sum_probs=232.3

Q ss_pred             CCccEEEEECCCcc--EEEEecCCeEEEEEEeCCCeeeEEecCCCCCCCCCcccCcccEEccccCCCC------CCCCce
Q 021879           10 DGLPRIILTEPTGS--SAEVLLYGGQVVSWKNERREELLFMSSKSFWKPPKAIRGGIPVCFPQFGNLG------LLEQHG   81 (306)
Q Consensus        10 ~~~~~~~L~~~~~~--~a~v~~~Ga~l~s~~~~~g~e~L~~~~~~~~~~~~~irgg~p~lfP~~gr~~------~~~~HG   81 (306)
                      ++++.++|+|+++.  +++|.++||+|+||+.+ |+|+||.++.+.|...+++|||+|+||||+||+.      ++++||
T Consensus         5 ~~~~~~~L~n~~~~~~~~~i~~~Ga~l~s~~~~-G~~vl~~~~~~~~~~~~~~~GGip~l~P~~gr~~~~~~~y~l~~HG   83 (297)
T 2cir_A            5 ETDKEVVLTHPADETTSVHILKYGATVYSWKLK-SEEQLWLSTAAKLDGSKPVRGGIPLVFPVFGKNSTDEHLSKLPQHG   83 (297)
T ss_dssp             ECSSEEEEEETTEEEEEEEEETBTTEEEEEEET-TEECBCBCTTCCCSSSSCCSBSBCEEBSCSSCCSSSTTGGGSCTTB
T ss_pred             cCCCEEEEeCCCCceeEEEEECCCcEEEEEEeC-CeEEEecCcHHHhcCCCCccCCCCEEEEecCCCCCCcccCCCCCcc
Confidence            46789999998756  89999999999999985 8899999988889989999999999999999983      789999


Q ss_pred             EEeccCcEEEeeCCCCCCCCCccEEEEEecC---ChhhhccCCCceEEEEEEEEeCCeEEEEEEEEeCC-CCceeeeeec
Q 021879           82 FARNRFWSLDEDASPLPPANNQSTVDLILKS---TEEDIKAWPRGFELRLRISISPGKLTLIPRVRNVD-NKAFSFMFAL  157 (306)
Q Consensus        82 far~~~W~v~~~~~~~~~~~~~~~v~l~l~~---~~~~~~~~P~~f~l~~~y~L~~~~L~i~~~v~N~~-~~~~p~~~g~  157 (306)
                      |+|++.|++++..     +++..+|+|++.+   +++++++|||+|+++++|+|.+++|+|+|+++|++ +++|||++|+
T Consensus        84 far~~~W~v~~~~-----~~~~~~v~l~l~s~~~~~~~~~g~P~~~~~~vty~L~~~~L~i~~~~~N~~~d~~~~~~~~~  158 (297)
T 2cir_A           84 LARNSTWEFLGQT-----KENPPTVQFGLKPEIANPELTKLWPMDYLLILTVELGSDYLKTAIEVENTSSSKELKFNWLF  158 (297)
T ss_dssp             SGGGSBCEEEEEE-----EETTEEEEEEECGGGSCHHHHHHSCCCCEEEEEEEECSSEEEEEEEEECCCSSCCEEEEEEE
T ss_pred             ccCCCceEEEeec-----cCCceEEEEEecCCCCCHHHHhhCCCcEEEEEEEEEcCCEEEEEEEEEcCCCCcceEEeeec
Confidence            9999999998762     0123679999998   78889999999999999999989999999999999 9999999999


Q ss_pred             cccccCCCcceEEEeccCCCccccccccccceeccCceeeecCccCeEEeCCC--CeEEEEeCCCCcEEEEEecCCCcEE
Q 021879          158 RNYLSVSDISEVRVEGLETLDYFDYLMNKERFTEQADAITFDGEIDRVYLSTP--TKIAIIDHEKKRTFELRKDGMPDSV  235 (306)
Q Consensus       158 HpYF~~~~~~~~~~~~~~~~~~~d~l~~~~~~~~~~~~~~~~~~~D~~y~~~~--~~~~l~~~~~~~~l~v~~~~~~~~v  235 (306)
                      ||||+++++.++.+.|+.+..++|.... .......+.+.+..++|++|....  ..++|.++ ++++|+|.++++|++|
T Consensus       159 H~YFnl~~~~~~~~~gv~~~~~~d~~~~-~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~l~~~-~g~~l~v~~~~~p~~~  236 (297)
T 2cir_A          159 HTYFRIEDIEGTMVSNLAGMKLYDQLLK-ESYVDKHPVVTFNQETDVIYQNVSAERAIQIVDK-GVQIHTLKRYNLPDTV  236 (297)
T ss_dssp             CCEEECSCGGGEEEESCTTCEEEETTTT-EEEECCSSSBCCSSCEEEEECCCCTTCCEEEEET-TEEEEEEEEESCCEEE
T ss_pred             CceEeCCCccceEEecCCCCccEeccCC-ccccccCCccccCCccceEEeCCCCCccEEEEcC-CCCEEEEEecCCCcEE
Confidence            9999999877788887766557775432 222223456777789999997654  57889999 9999999998899999


Q ss_pred             EeCCcccccccCCCC-CCCCCcceEEeceeeecCCeEeCCCCEEEEEEEEEEEe
Q 021879          236 VWNPWDKKAKALPDM-GVDGYKTMLCVDSAAIENPIVLKPFEEWRGRQELSTVS  288 (306)
Q Consensus       236 vw~p~~~~~~~~~d~-~~~~~~~~vCvEp~~~~g~~~L~pGe~~~~~~~i~~~~  288 (306)
                      ||||+.++++++.|+ ++.+|++|||||||+..+.++|+|||+++.+++|++..
T Consensus       237 v~t~~~~~~~~~~~~~~~~~~~~~vClEp~~~~~~~~L~pGe~~~~~~~~~~~~  290 (297)
T 2cir_A          237 VWNPWIEKSQGMADFEPKTGYQQMICIEPGHVHDFISLAPGKKWNAYQLLCKEE  290 (297)
T ss_dssp             EEECHHHHHHHCTTCCSTTGGGGEEEEEEEEEEEEEEECTTCEEEEEEEEECC-
T ss_pred             EECcchhhccccccCCCccccccEEEECceECCCCEEECCCCeEEEEEEEEEEe
Confidence            999976556667776 56677899999999998999999999999999999964
>2hta_A Putative enzyme related to aldose 1-epimerase; carbohydrate, MU YEAD, GALM, sugar phosphate, isomerase; 1.90A {Salmonella typhimurium} PDB: 2htb_A Back     alignment and structure
>3k25_A SLR1438 protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, SGR112, P73504_SYNY3; 2.55A {Synechocystis SP} Back     alignment and structure
>1jov_A HI1317; hypothetical protein, structure 2 function project, S2F, structural genomics, unknown function; 1.57A {Haemophilus influenzae} SCOP: b.30.5.7 Back     alignment and structure
>3q1n_A Galactose mutarotase related enzyme; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE; 1.61A {Lactobacillus casei} Back     alignment and structure
>3dcd_A Galactose mutarotase related enzyme; Q5FKD7 LAR33 NESG X-RAY, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Lactobacillus acidophilus} Back     alignment and structure
>3mwx_A Aldose 1-epimerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, isomerase; HET: MSE; 1.45A {Bacillus subtilis} Back     alignment and structure
>3nre_A Aldose 1-epimerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, isomerase; HET: MSE; 1.59A {Escherichia coli} Back     alignment and structure
>3os7_A Galactose mutarotase-like protein; structural genomics, joint center for structural genomics, J protein structure initiative; HET: PG4 TLA; 1.80A {Clostridium acetobutylicum} Back     alignment and structure
>1yga_A Hypothetical 37.9 kDa protein in BIO3-HXT17 intergenic region; aldose_1_epimerase, sugar metabolism, predicted, structural genomics; 2.00A {Saccharomyces cerevisiae} Back     alignment and structure
>1snz_A Aldose 1-epimerase; mutarotase, galactosemia, isomerase; 2.20A {Homo sapiens} SCOP: b.30.5.4 PDB: 1so0_A* Back     alignment and structure
>1nsx_A Galactose mutarotase; epimerase, galactose metabolism, isomerase; HET: GAL; 1.75A {Lactococcus lactis} SCOP: b.30.5.4 PDB: 1nsz_A* 1mmu_A* 1l7k_A* 1l7j_A* 1mmx_A* 1mmy_A* 1mmz_A* 1mn0_A* 1ns0_A* 1ns4_A* 1ns8_A* 1nsr_A* 1nsu_A* 1nsv_A* 1ns7_A* 1ns2_A* 1nsm_A* 1nss_A* Back     alignment and structure
>1lur_A Aldose 1-epimerase; vitamin B12, methyltransferase, structural genomics, structure-based function assignment, decarboxylase, PSI; 1.85A {Caenorhabditis elegans} SCOP: b.30.5.4 Back     alignment and structure
>3imh_A Galactose-1-epimerase; structural genomics, PSI-2, protein ST initiative, NEW YORK SGX research center for structural GEN nysgxrc; 1.76A {Lactobacillus acidophilus} Back     alignment and structure
>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2 Back     alignment and structure
>3ty1_A Hypothetical aldose 1-epimerase; supersandwich, structural genomics, joint center for structu genomics, JCSG; HET: MSE; 1.90A {Klebsiella pneumoniae subsp} Back     alignment and structure
>3bs6_A Inner membrane protein OXAA; YIDC/OXA1/ALB3 family, membrane insertion, chaperone, SEC translocon, periplasmic domain, beta supersandwich fold; HET: PG4 PGE 2PE; 1.80A {Escherichia coli} Back     alignment and structure
>3blc_A Inner membrane protein OXAA; YIDC, membrane assembly facilitator, chaperone, periplasmic inner membrane, transmembrane; 2.50A {Escherichia coli K12} Back     alignment and structure
>4ep8_B Urease subunit beta; alpha-beta barrel, nickel metalloenzyme, hydrolase, radiatio; HET: KCX; 1.55A {Enterobacter aerogenes} PDB: 1a5l_B 1a5k_B 1a5n_B 1a5o_B 1ef2_B* 1ejr_B* 1ejs_B* 1ejt_B* 1eju_B* 1ejv_B* 1a5m_B* 1ejw_B* 1ejx_B* 4epb_B* 4epd_B* 4epe_B* 1fwa_B* 1fwb_B* 1fwc_B* 1fwd_B* ... Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 306
d1jova_269 b.30.5.7 (A:) Hypothetical protein HI1317 {Haemoph 1e-76
>d1jova_ b.30.5.7 (A:) Hypothetical protein HI1317 {Haemophilus influenzae [TaxId: 727]} Length = 269 Back     information, alignment and structure

class: All beta proteins
fold: Supersandwich
superfamily: Galactose mutarotase-like
family: Hypothetical protein HI1317
domain: Hypothetical protein HI1317
species: Haemophilus influenzae [TaxId: 727]

 Score =  233 bits (594), Expect = 1e-76
 Identities = 68/278 (24%), Positives = 119/278 (42%), Gaps = 27/278 (9%)

Query: 8   DKDGLPRIILTEPTGSSAEVLLYGGQVVSWKNER-REELLFMSSKSFWKPPKAIRGGIPV 66
             + +P + L    G+ A++ L G Q++SWK +  ++++L++S    +K   AIRGG+P+
Sbjct: 17  QHNDIPVLHLKHAVGT-AKISLQGAQLISWKPQNAKQDVLWLSEVEPFKNGNAIRGGVPI 75

Query: 67  CFPQFGNLGLLEQHGFARNRFWSLDEDASPLPPANNQSTVDLILKSTEEDIKAWPRGFEL 126
           C+P FG +     HG AR R W L               + +     E ++ +     E 
Sbjct: 76  CYPWFGGVKQ-PAHGTARIRLWQLSH-----------YYISVHKVRLEFELFSDLNIIEA 123

Query: 127 RLRISISPGKLTLIPRVRNVDNKAFSFMFALRNYLSVSDISEVRVEGLETLDYFDYLMNK 186
           ++ +       T    +        S   AL  Y ++ DI++V V+GL    +      +
Sbjct: 124 KVSM-----VFTDKCHLTFTHYGEESAQAALHTYFNIGDINQVEVQGLPETCFNSLNQQQ 178

Query: 187 ERFTEQADAITFDGEIDRVYLSTPTKIAIIDHEKKRTFELRKDGMPDSVVWNPWDKKAKA 246
           E              +D +Y +   +  I+D    RT  L        V+WNPW KK   
Sbjct: 179 E---NVPSPRHISENVDCIYSAENMQNQILDKSFNRTIALHHHNASQFVLWNPWHKKTSG 235

Query: 247 LPDMGVDGYKTMLCVDSAAIENPIVLKPFEEWRGRQEL 284
           + +    GY+ MLC+++A I +  +L+  E       L
Sbjct: 236 MSE---TGYQKMLCLETARIHH--LLEFGESLSVEISL 268

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query306
d1jova_269 Hypothetical protein HI1317 {Haemophilus influenza 100.0
d1z45a1342 Galactose mutarotase {Baker's yeast (Saccharomyces 99.97
d1nsza_340 Galactose mutarotase {Lactococcus lactis [TaxId: 1 99.97
d1lura_329 Aldose 1-epimerase homologue {Nematode (Caenorhabd 99.96
d1so0a_344 Galactose mutarotase {Human (Homo sapiens) [TaxId: 99.96
d1k1xa2275 4-alpha-glucanotransferase, C-terminal domain {Arc 91.09
d1ejxb_101 Urease, beta-subunit {Klebsiella aerogenes [TaxId: 83.45
>d1jova_ b.30.5.7 (A:) Hypothetical protein HI1317 {Haemophilus influenzae [TaxId: 727]} Back     information, alignment and structure
class: All beta proteins
fold: Supersandwich
superfamily: Galactose mutarotase-like
family: Hypothetical protein HI1317
domain: Hypothetical protein HI1317
species: Haemophilus influenzae [TaxId: 727]

Probab=100.00  E-value=4.8e-55  Score=389.44  Aligned_cols=252  Identities=26%  Similarity=0.471  Sum_probs=209.9

Q ss_pred             CCCCccEEEEECCCccEEEEecCCeEEEEEEeC-CCeeeEEecCCCCCCCCCcccCcccEEccccCCCCCCCCceEEecc
Q 021879            8 DKDGLPRIILTEPTGSSAEVLLYGGQVVSWKNE-RREELLFMSSKSFWKPPKAIRGGIPVCFPQFGNLGLLEQHGFARNR   86 (306)
Q Consensus         8 ~~~~~~~~~L~~~~~~~a~v~~~Ga~l~s~~~~-~g~e~L~~~~~~~~~~~~~irgg~p~lfP~~gr~~~~~~HGfar~~   86 (306)
                      ..++++.++|+|+. ++|+|+++||+|+||+.+ +++|+||++++++|+.+++||||+|+||||||+ ..+|+|||||++
T Consensus        17 ~~~~l~~i~i~~~~-~~a~i~~~Ga~l~s~~~~~~~~e~Lw~s~~a~~~~~~~IRGGiPi~fP~fG~-~~~p~HGFAR~~   94 (269)
T d1jova_          17 QHNDIPVLHLKHAV-GTAKISLQGAQLISWKPQNAKQDVLWLSEVEPFKNGNAIRGGVPICYPWFGG-VKQPAHGTARIR   94 (269)
T ss_dssp             EETTEEEEEEEETT-EEEEEETBTTEEEEEEETTCSSCSBCBCTTCCCCTTSCCSBSCCEEBSSCGG-GSSSTTBSGGGS
T ss_pred             ccCCccEEEEeCCC-EEEEEECCCCEEEEEEECCCCceEEEeCChhhccCCCcccCCcceeCcccCC-CCCCCCcccccc
Confidence            36899999999997 899999999999999975 458999999999999999999999999999998 468999999999


Q ss_pred             CcEEEeeCCCCCCCCCccEEEEEecCChhhhccCCCceEEEEEEEEeCCeEEEEEEEEeCCCCceeeeeeccccccCCCc
Q 021879           87 FWSLDEDASPLPPANNQSTVDLILKSTEEDIKAWPRGFELRLRISISPGKLTLIPRVRNVDNKAFSFMFALRNYLSVSDI  166 (306)
Q Consensus        87 ~W~v~~~~~~~~~~~~~~~v~l~l~~~~~~~~~~P~~f~l~~~y~L~~~~L~i~~~v~N~~~~~~p~~~g~HpYF~~~~~  166 (306)
                      .|+|+++.      ++...+.+++.     ...|||.|+++++|+|+   +  +++++|+++++|||++|+||||++++.
T Consensus        95 ~w~l~~~~------~~~~~~~l~~~-----l~~~~~~f~~~~~~~lt---l--~~~l~n~~~~~~pf~~g~HpyF~v~d~  158 (269)
T d1jova_          95 LWQLSHYY------ISVHKVRLEFE-----LFSDLNIIEAKVSMVFT---D--KCHLTFTHYGEESAQAALHTYFNIGDI  158 (269)
T ss_dssp             BCEEEEEE------EETTEEEEEEE-----EECTTSCEEEEEEEEES---S--SEEEEEEECCSSCEEEEECCEEECSCG
T ss_pred             ceEEEEEe------cCCceEEEEEE-----eccCCCcceEEEEEEec---c--EEEEEEccCCCccceecccceEecCCc
Confidence            99999874      23445555443     23588999999999874   3  355667778899999999999999999


Q ss_pred             ceEEEeccCCCccccccccccceeccCceeeecCccCeEEeCCCCeEEEEeCCCCcEEEEEecCCCcEEEeCCccccccc
Q 021879          167 SEVRVEGLETLDYFDYLMNKERFTEQADAITFDGEIDRVYLSTPTKIAIIDHEKKRTFELRKDGMPDSVVWNPWDKKAKA  246 (306)
Q Consensus       167 ~~~~~~~~~~~~~~d~l~~~~~~~~~~~~~~~~~~~D~~y~~~~~~~~l~~~~~~~~l~v~~~~~~~~vvw~p~~~~~~~  246 (306)
                      +++++.++++..|.+. .....  ...+.+.+.+++|++|.+.++.+.|.|+..+++|+|..++++++||||||.++++.
T Consensus       159 ~~~~v~gl~~~~~~~~-~~~~~--~~~~~~~~~~~~D~i~~~~~~~~~i~d~~~~~~i~v~~~g~~~~vVWnP~~~~a~~  235 (269)
T d1jova_         159 NQVEVQGLPETCFNSL-NQQQE--NVPSPRHISENVDCIYSAENMQNQILDKSFNRTIALHHHNASQFVLWNPWHKKTSG  235 (269)
T ss_dssp             GGEEEESCCSEEEETT-TTEEE--ECCSSBCCSSCEEEEEECSSSEEEEEETTTTEEEEEEEESCSEEEEEECTTSCCTT
T ss_pred             cceEEecCCccccccc-ccccc--ccCCCcccCcCeeEEecCCCCcEEEEeCCCCCEEEEEEeCCCcEEEECCccchhcc
Confidence            9999999876655442 22222  12355778889999999988899999999999999999999999999999877654


Q ss_pred             CCCCCCCCCcceEEeceeeecCCeEeCCCCEEEEEEEEE
Q 021879          247 LPDMGVDGYKTMLCVDSAAIENPIVLKPFEEWRGRQELS  285 (306)
Q Consensus       247 ~~d~~~~~~~~~vCvEp~~~~g~~~L~pGe~~~~~~~i~  285 (306)
                      |   .+++|++||||||+.+.  .+|+|||+++.+++|+
T Consensus       236 ~---~d~~~~~fvCVEp~~~~--~~L~PGes~~~~~~ir  269 (269)
T d1jova_         236 M---SETGYQKMLCLETARIH--HLLEFGESLSVEISLK  269 (269)
T ss_dssp             C---CTTGGGGEEEEEEEEEE--EEECTTCEEEEEEEEC
T ss_pred             c---cccCCCCEEEECcccCC--ceECCCCeEEEEEEEC
Confidence            4   45568999999998864  4899999999998874
>d1z45a1 b.30.5.4 (A:358-699) Galactose mutarotase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1nsza_ b.30.5.4 (A:) Galactose mutarotase {Lactococcus lactis [TaxId: 1358]} Back     information, alignment and structure
>d1lura_ b.30.5.4 (A:) Aldose 1-epimerase homologue {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Back     information, alignment and structure
>d1so0a_ b.30.5.4 (A:) Galactose mutarotase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1k1xa2 b.30.5.8 (A:385-659) 4-alpha-glucanotransferase, C-terminal domain {Archaeon Thermococcus litoralis [TaxId: 2265]} Back     information, alignment and structure
>d1ejxb_ b.85.3.1 (B:) Urease, beta-subunit {Klebsiella aerogenes [TaxId: 28451]} Back     information, alignment and structure