Citrus Sinensis ID: 021885

Local Sequence Feature Prediction

Prediction and Method	Result

Residue Number Marker

Protein Sequence

Secondary Structure (Consensus)

Disordered Region (Consensus)

Transmembrane Helix (Consensus)

Signal Peptide (Consensus)

Coiled Coil (COILS)

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300------

MDNRNVVVCDNGTGYVKCGFAGENFPNSVFPCVVGRPMLRYEESLMEQELKDTIVGAAALDLRHQLDVSYPVNNGIVQNWEDMGQVWDHAFFSELKIDPPECKILLTDPPLNPAKNREKMVETMFEKYNFAGVFIQIQAVLTLYAQGLLTGLVIDSGDGVTHVVPVVDGYSFPHLTKRMNVAGRHITSYLVDLLSRRGYSMNRTADFETVRQIKEKLCYISYDYKREYQLGLETTILVKNYTLPDGRVIKVGTERFQAPEALFTPVSLYFFSVVFYPLKLTHAIHCSCSTEHAIISTLPDHFVLYW

cccccEEEEEcccccEEccccccccccEEEccccccccccccHHHHccccccccccHHHHHcccccEEccccccccccccHHHHHHHHHHcccccccccccccEEcccccccccHHHHHHHHHHHHcccccEEEEEEHHHHHHHcccccEEEEEEcccccEEEEEcccccccccccHHcccccHHHHHHHHHHHHccccccccccHHHHHHHHHHHccEEcccHHHHHHHcccccccEEEEEcccccEEEEccccccccccccccccccccccccHHHHHHHHHHcccHHHHHHHccccccccccc

*DNRNVVVCDNGTGYVKCGFAGENFPNSVFPCVVGRPMLRYEESLMEQELKDTIVGAAALDLRHQLDVSYPVNNGIVQNWEDMGQVWDHAFFSELKIDPPECKILLTDPPLNPAKNREKMVETMFEKYNFAGVFIQIQAVLTLYAQGLLTGLVIDSGDGVTHVVPVVDGYSFPHLTKRMNVAGRHITSYLVDLLSRRGYSMNRTADFETVRQIKEKLCYISYDYKREYQLGLETTILVKNYTLPDGRVIKVGTERFQAPEALFTPVSLYFFSVVFYPLKLTHAIHCSCSTEHAIISTLPDHFVLYW

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Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries

Annotation	Function Description	Confidence Level	Reference Protein
Actin-related protein 2	Functions as ATP-binding component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks. Seems to contact the pointed end of the daughter actin filament. Regulates the directionality of cell expansion by regulating the actin organization, and thus the microtubules distribution and the fusion of small vacuoles.	probable	Q6Z256
Actin-related protein 2	Functions as ATP-binding component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks. Seems to contact the pointed end of the daughter actin filament (By similarity). Involved in the control of cell morphogenesis in leaf epidermal pavement cells, root hairs, hypocotyls epidermal cells and trichomes, especially during rapid cell expansion. Regulates the directionality of cell expansion by regulating the actin organization, and thus the microtubules distribution and the fusion of small vacuoles.	probable	Q9LSD6
Actin-related protein 2-B	Functions as ATP-binding component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks. Seems to contact the pointed end of the daughter actin filament.	probable	Q56A35

Prediction of Enzyme Commission Number

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1K8K, chain B
Confidence level:very confident
Coverage over the Query: 162-304
View the alignment between query and template
View the model in PyMOL