Citrus Sinensis ID: 021928
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
|
|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
No hits with e-value below 0.001 by BLAST
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 305 | ||||||
| 224073720 | 306 | predicted protein [Populus trichocarpa] | 0.963 | 0.960 | 0.744 | 1e-123 | |
| 255560651 | 302 | conserved hypothetical protein [Ricinus | 0.977 | 0.986 | 0.716 | 1e-118 | |
| 225442154 | 303 | PREDICTED: uncharacterized protein LOC10 | 0.977 | 0.983 | 0.693 | 1e-117 | |
| 356561047 | 312 | PREDICTED: uncharacterized protein LOC10 | 0.960 | 0.939 | 0.667 | 1e-111 | |
| 356522384 | 316 | PREDICTED: uncharacterized protein LOC10 | 0.960 | 0.927 | 0.649 | 1e-109 | |
| 79378061 | 312 | Rossmann-fold NAD(P)-binding domain-cont | 0.986 | 0.964 | 0.610 | 1e-101 | |
| 218193028 | 308 | hypothetical protein OsI_12007 [Oryza sa | 0.859 | 0.850 | 0.666 | 9e-99 | |
| 37991868 | 310 | expressed protein [Oryza sativa Japonica | 0.859 | 0.845 | 0.672 | 1e-98 | |
| 297842009 | 311 | hypothetical protein ARALYDRAFT_476397 [ | 0.983 | 0.964 | 0.594 | 1e-98 | |
| 79321173 | 311 | Rossmann-fold NAD(P)-binding domain-cont | 0.986 | 0.967 | 0.612 | 2e-97 |
| >gi|224073720|ref|XP_002304142.1| predicted protein [Populus trichocarpa] gi|222841574|gb|EEE79121.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 446 bits (1147), Expect = e-123, Method: Compositional matrix adjust.
Identities = 227/305 (74%), Positives = 254/305 (83%), Gaps = 11/305 (3%)
Query: 4 TAFPSTLVIQTSHISFTSQKKSFELANPSSLIFNFEKKVLFRCSAKKKISFVDQILDYIE 63
TA PST QTS +F SQ ++ +PS LIF + L RCSAKKKISFVDQILDYIE
Sbjct: 3 TALPSTAFCQTS-FTFPSQNPC-KVKSPS-LIFRTKSHGLIRCSAKKKISFVDQILDYIE 59
Query: 64 GGPKLRKWYGAPDLLPKDGSNEEDEEKEDEFP-----EARDAVLVTDGDSDIGQMVILSL 118
GGPKLRKWYGAPDLLPKDGS+ EDE DE P E RDAVLVTDGDS+IGQM+ILSL
Sbjct: 60 GGPKLRKWYGAPDLLPKDGSDTEDE---DELPGNALNEVRDAVLVTDGDSEIGQMIILSL 116
Query: 119 IVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEGFISNAG 178
IVK+ R+KALVKDKR AME+FGTYVESMAGDAS+K FLK ALRGVR+IICP+EGF+SN G
Sbjct: 117 IVKKARVKALVKDKRTAMEAFGTYVESMAGDASSKPFLKKALRGVRAIICPNEGFLSNGG 176
Query: 179 SLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMASGIPYTIIRTGVLQNT 238
L+GV+HVILLSQLSVYRGSGGIQALMK NARKLAE+DES L+ASGIPYTIIR G+LQ+T
Sbjct: 177 DLQGVKHVILLSQLSVYRGSGGIQALMKNNARKLAEKDESTLVASGIPYTIIRVGMLQDT 236
Query: 239 PGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVVNGEEKVSDWKKCFSR 298
PGG QGF FE+G A GSLSKEDAAFICVEAL+ +PQ G FE VNGEEKVSDWK+ +R
Sbjct: 237 PGGTQGFSFEKGSAEKGSLSKEDAAFICVEALDVVPQIGFTFEAVNGEEKVSDWKERLTR 296
Query: 299 LMEKT 303
LMEK+
Sbjct: 297 LMEKS 301
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255560651|ref|XP_002521339.1| conserved hypothetical protein [Ricinus communis] gi|223539417|gb|EEF41007.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 429 bits (1104), Expect = e-118, Method: Compositional matrix adjust.
Identities = 217/303 (71%), Positives = 250/303 (82%), Gaps = 5/303 (1%)
Query: 1 MAGTAFPSTLVIQTS-HISFTSQKKSFELANPSSLIFNFEKKVLFRCSAKKKISFVDQIL 59
MAGT F S L+ Q+ +S+ +Q KS + S + + L CSAKKKI F+DQIL
Sbjct: 1 MAGT-FSSILLWQSCLSLSYQNQSKSLDF---SPIFHTTNNRSLVHCSAKKKIGFMDQIL 56
Query: 60 DYIEGGPKLRKWYGAPDLLPKDGSNEEDEEKEDEFPEARDAVLVTDGDSDIGQMVILSLI 119
DYIEGGPKLRKWYGAPDLLPKDGS +DE++ E E RDA+LVTDGDS+IGQMVILSLI
Sbjct: 57 DYIEGGPKLRKWYGAPDLLPKDGSTMQDEDEFSEEEEVRDAILVTDGDSEIGQMVILSLI 116
Query: 120 VKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEGFISNAGS 179
VKR ++KALVKDKR+AME+FGTYVESMAGD S+ F+K ALRGVR+IICP EGF+S+ GS
Sbjct: 117 VKRAKVKALVKDKRSAMEAFGTYVESMAGDTSSMLFIKKALRGVRAIICPKEGFLSSVGS 176
Query: 180 LKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMASGIPYTIIRTGVLQNTP 239
LKGV+HVILLSQLSVYRGS GI+A+MK NARKL EQDES L+ASGIP TIIR G+LQNTP
Sbjct: 177 LKGVKHVILLSQLSVYRGSSGIEAMMKSNARKLTEQDESALVASGIPCTIIRVGMLQNTP 236
Query: 240 GGKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVVNGEEKVSDWKKCFSRL 299
GG QGF FE+GCA GSLSKEDAAFICVEALE++PQ IFEVVNGEEKVSDWK+C +RL
Sbjct: 237 GGTQGFNFEKGCAEKGSLSKEDAAFICVEALETVPQAEFIFEVVNGEEKVSDWKECLARL 296
Query: 300 MEK 302
MEK
Sbjct: 297 MEK 299
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225442154|ref|XP_002274144.1| PREDICTED: uncharacterized protein LOC100246327 [Vitis vinifera] gi|297743019|emb|CBI35886.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 213/307 (69%), Positives = 249/307 (81%), Gaps = 9/307 (2%)
Query: 1 MAGTAFPSTLVIQTSHIS-FTSQKKSFELANPSSLIFNFEKK-VLFRCSAKKKISFVDQI 58
MAG P H S F S + S + SS +F ++ L CSAKKK FVDQI
Sbjct: 1 MAGYLLPY-------HTSLFLSSQNSHRITATSSFLFKIDRPGSLVCCSAKKKAGFVDQI 53
Query: 59 LDYIEGGPKLRKWYGAPDLLPKDGSNEEDEEKEDEFPEARDAVLVTDGDSDIGQMVILSL 118
LDYIEGGPKLRKWYGAPDLLPKDGS+ E++++ E E RDAVLVTDGDS+IGQMVILSL
Sbjct: 54 LDYIEGGPKLRKWYGAPDLLPKDGSSVEEDDESAEVEEDRDAVLVTDGDSEIGQMVILSL 113
Query: 119 IVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEGFISNAG 178
IVKR+RIKALVKDKR AME+FGTYVESMAGDA++K F + ALRGVR+IICP+EG ISN G
Sbjct: 114 IVKRSRIKALVKDKRAAMEAFGTYVESMAGDANDKSFQRKALRGVRTIICPNEGSISNFG 173
Query: 179 SLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMASGIPYTIIRTGVLQNT 238
SL GVQH+ILLSQLS YRG+GGIQALM+GNARKLAE+DES++ SGIPYTIIR G+LQN+
Sbjct: 174 SLMGVQHIILLSQLSAYRGTGGIQALMQGNARKLAEKDESIVTGSGIPYTIIRAGLLQNS 233
Query: 239 PGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVVNGEEKVSDWKKCFSR 298
PGGK+GF F+EG AA G LSKEDAAFICVEA++++P+TGL+FEV NG EKVSDWK+CF
Sbjct: 234 PGGKEGFSFKEGVAATGRLSKEDAAFICVEAVDTVPETGLVFEVANGGEKVSDWKECFKA 293
Query: 299 LMEKTGK 305
L+EK K
Sbjct: 294 LVEKPDK 300
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356561047|ref|XP_003548797.1| PREDICTED: uncharacterized protein LOC100806043 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 203/304 (66%), Positives = 244/304 (80%), Gaps = 11/304 (3%)
Query: 8 STLVIQTSHISFTSQKKSFELANPSSLIFNFEKKV----LFRCSAKKKISFVDQILDYIE 63
STL Q S + TSQ+ A SS FN E L C AKKK+SF++QILDYIE
Sbjct: 11 STLPFQKS-VPLTSQRSG--TAFGSSFQFNRENGTVVTPLVVCHAKKKLSFMEQILDYIE 67
Query: 64 GGPKLRKWYGAPDLLPKDGSNEEDEEKEDEFP--EARDAVLVTDGDSDIGQMVILSLIVK 121
GGPKLRKWYGAPD+L KDG+ ED ED++P E RDAVLVTDGDS++GQMVILSLIVK
Sbjct: 68 GGPKLRKWYGAPDILEKDGTAIED--NEDDYPEDEVRDAVLVTDGDSEMGQMVILSLIVK 125
Query: 122 RTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEGFISNAGSLK 181
+ R+K LVKDKR A+E+FG+YVESMAGD S+K+F+K ALRGVR+IICP+EGF+S+ GSL+
Sbjct: 126 KARVKTLVKDKRVALEAFGSYVESMAGDTSDKRFVKKALRGVRTIICPNEGFLSSVGSLQ 185
Query: 182 GVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMASGIPYTIIRTGVLQNTPGG 241
GVQHVI+LS+LSVY G G Q++MK NA+KLAEQDES+L SGIPYTIIRTG LQ+TPGG
Sbjct: 186 GVQHVIVLSRLSVYGGQSGFQSMMKSNAKKLAEQDESVLKTSGIPYTIIRTGALQDTPGG 245
Query: 242 KQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVVNGEEKVSDWKKCFSRLME 301
KQGF F+EGCAA+GS+SKEDAAF+CV A + +PQTG IFEV NG+ KVSDWK+C + LME
Sbjct: 246 KQGFTFDEGCAASGSISKEDAAFVCVAAFDCVPQTGFIFEVANGDNKVSDWKECLATLME 305
Query: 302 KTGK 305
K +
Sbjct: 306 KASQ 309
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356522384|ref|XP_003529826.1| PREDICTED: uncharacterized protein LOC100801216 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 200/308 (64%), Positives = 242/308 (78%), Gaps = 15/308 (4%)
Query: 8 STLVIQTSHISFTSQKKSFELANPSSLIFNFEK----KVLFRCSAKKKISFVDQILDYIE 63
STL Q S + SQ+ SS +F+ E L C AKKK+SF++QILDYIE
Sbjct: 11 STLSFQKS-VPLNSQRSGTSFG--SSFLFSRENGSVVPSLVVCHAKKKLSFMEQILDYIE 67
Query: 64 GGPKLRKWYGAPDLLPKDGSNEEDEEKEDEFP------EARDAVLVTDGDSDIGQMVILS 117
GGPKLRKWYGAPD+L KDG+ ED+E D++P E RDAVLVTDGDS+ GQMVILS
Sbjct: 68 GGPKLRKWYGAPDILEKDGTAIEDDE--DDYPGEQIEDEVRDAVLVTDGDSETGQMVILS 125
Query: 118 LIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEGFISNA 177
LIVK+ R+K LVKDKR A+E+FG+YVESMAGD S+K+FLK ALRGVR+IICP+EGF+S+
Sbjct: 126 LIVKKARVKTLVKDKRVALEAFGSYVESMAGDTSDKRFLKKALRGVRTIICPNEGFLSSV 185
Query: 178 GSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMASGIPYTIIRTGVLQN 237
GSL+GVQHVI+LSQLSVY G G Q++MK NA+KLAEQDES+L SGIPYTIIRTG L +
Sbjct: 186 GSLQGVQHVIVLSQLSVYGGKSGFQSMMKSNAKKLAEQDESVLKTSGIPYTIIRTGALLD 245
Query: 238 TPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVVNGEEKVSDWKKCFS 297
PGGK+GF F+EGCAA GS+SKEDAAF+CV AL+ +PQTG IFEV NG+ KVSDWK+C +
Sbjct: 246 APGGKRGFTFDEGCAARGSISKEDAAFVCVAALDCVPQTGFIFEVANGDNKVSDWKECLA 305
Query: 298 RLMEKTGK 305
LME+T +
Sbjct: 306 TLMEETSQ 313
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|79378061|ref|NP_177408.3| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana] gi|44917555|gb|AAS49102.1| At1g72640 [Arabidopsis thaliana] gi|332197230|gb|AEE35351.1| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 188/308 (61%), Positives = 229/308 (74%), Gaps = 7/308 (2%)
Query: 1 MAGTAFPSTLVIQTSHISFTSQKKSFELANPSSLIFNFEKKVLFRCSAKKKISFVDQILD 60
MAGT+ PS L+ Q + F+S + E AN + K+ L RC AKKKISFVDQILD
Sbjct: 1 MAGTSLPSCLLSQGPSLLFSSSNQDSE-ANKCRIGITSGKRCLVRCFAKKKISFVDQILD 59
Query: 61 YIEGGPKLRKWYGAPDLLPKDGSNEED------EEKEDEFPEARDAVLVTDGDSDIGQMV 114
YIEGGPKLRKWYGAP+L PKDGS D EEKED+ +D V VTDGDSD+GQM+
Sbjct: 60 YIEGGPKLRKWYGAPELRPKDGSLSGDDDEFEAEEKEDDLDGEKDVVFVTDGDSDLGQMI 119
Query: 115 ILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEGFI 174
IL LIVK TR+KALVKDKR A+E+FG+YVE GDAS+++FLK A +GV ++I P+EGF+
Sbjct: 120 ILQLIVKGTRVKALVKDKRKALEAFGSYVELTTGDASDERFLKKAFKGVGAVISPTEGFL 179
Query: 175 SNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMASGIPYTIIRTGV 234
S S +GV+H +LLSQLSVY SGGIQA+M A+KLAEQDE+ ++S +PYTIIRTG
Sbjct: 180 SIVKSFRGVKHAVLLSQLSVYESSGGIQAMMNSKAKKLAEQDENAAISSNVPYTIIRTGK 239
Query: 235 LQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVVNGEEKVSDWKK 294
L+N+PGG QGF F G AA GS+SKEDAA ICVEAL IP TGLIFEV NGEE VSDW+
Sbjct: 240 LENSPGGSQGFNFSAGAAAKGSISKEDAARICVEALSVIPPTGLIFEVTNGEEVVSDWEG 299
Query: 295 CFSRLMEK 302
++M++
Sbjct: 300 QLMKVMQR 307
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|218193028|gb|EEC75455.1| hypothetical protein OsI_12007 [Oryza sativa Indica Group] | Back alignment and taxonomy information |
|---|
Score = 365 bits (938), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 176/264 (66%), Positives = 214/264 (81%), Gaps = 2/264 (0%)
Query: 35 IFNFEKKVLFRCSAKKKISFVDQILDYIEGGPKLRKWYGAPDLLPKDGSNEEDEEKEDEF 94
+FN V+ R +K + SF D+ILDYIEGGPKLR+WYGAPDLLPKDGS E+ E++ +
Sbjct: 38 LFNAATAVVVRSRSKDEASFTDRILDYIEGGPKLRRWYGAPDLLPKDGSAEDGEDEPSDI 97
Query: 95 PEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKK 154
E RDAVLVT+GDS+IGQMVILSLI+KR RIKALVKD+R+ E+FGTYVE M G+ +K
Sbjct: 98 EEPRDAVLVTNGDSEIGQMVILSLILKRARIKALVKDRRSTEEAFGTYVECMVGNMEDKS 157
Query: 155 FLKTALRGVRSIICPS-EGFISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLA 213
F K ALRGVR+IICP+ +GF S+ LKGVQH++LLSQLSVYRGSGG+QA+M RKLA
Sbjct: 158 FTKKALRGVRAIICPADDGFFSDL-DLKGVQHIVLLSQLSVYRGSGGLQAIMNSKLRKLA 216
Query: 214 EQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESI 273
E+DE +++ASGIP TIIRTG +Q+TPGG +GF F EG AA G +SKEDAA ICVEAL+SI
Sbjct: 217 ERDEEVVLASGIPSTIIRTGSMQSTPGGDRGFDFTEGAAAKGRMSKEDAATICVEALDSI 276
Query: 274 PQTGLIFEVVNGEEKVSDWKKCFS 297
PQT LIFEV NG+EKV+DWK F+
Sbjct: 277 PQTTLIFEVANGDEKVTDWKAWFA 300
|
Source: Oryza sativa Indica Group Species: Oryza sativa Genus: Oryza Family: Poaceae Order: Poales Class: Liliopsida Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|37991868|gb|AAR06314.1| expressed protein [Oryza sativa Japonica Group] gi|108708765|gb|ABF96560.1| expressed protein [Oryza sativa Japonica Group] | Back alignment and taxonomy information |
|---|
Score = 365 bits (938), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 179/266 (67%), Positives = 214/266 (80%), Gaps = 4/266 (1%)
Query: 35 IFNFEKKVLFRCSAKKKISFVDQILDYIEGGPKLRKWYGAPDLLPKDGSNE--EDEEKED 92
+FN V+ R +K + SF D+ILDYIEGGPKLR+WYGAPDLLPKDGS E EDE E
Sbjct: 38 LFNAATAVVVRSRSKDEASFTDRILDYIEGGPKLRRWYGAPDLLPKDGSAEDGEDEPSEI 97
Query: 93 EFPEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASN 152
+ E RDAVLVT+GDS+IGQMVILSLI+KR RIKALVKD+R+ E+FGTYVE M G+ +
Sbjct: 98 DIEEPRDAVLVTNGDSEIGQMVILSLILKRARIKALVKDRRSTEEAFGTYVECMVGNMED 157
Query: 153 KKFLKTALRGVRSIICPSE-GFISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK 211
K F K ALRGVR+IICP++ GF S+ LKGVQH++LLSQLSVYRGSGG+QA+M RK
Sbjct: 158 KSFTKKALRGVRAIICPADDGFFSDL-DLKGVQHIVLLSQLSVYRGSGGLQAIMNSKLRK 216
Query: 212 LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALE 271
LAE+DE +++ASGIP TIIRTG +Q+TPGG +GF F EG AA G +SKEDAA ICVEAL+
Sbjct: 217 LAERDEEVVLASGIPSTIIRTGSMQSTPGGDRGFDFTEGAAAKGRMSKEDAATICVEALD 276
Query: 272 SIPQTGLIFEVVNGEEKVSDWKKCFS 297
SIPQT LIFEV NG+EKV+DWK F+
Sbjct: 277 SIPQTTLIFEVANGDEKVTDWKAWFA 302
|
Source: Oryza sativa Japonica Group Species: Oryza sativa Genus: Oryza Family: Poaceae Order: Poales Class: Liliopsida Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297842009|ref|XP_002888886.1| hypothetical protein ARALYDRAFT_476397 [Arabidopsis lyrata subsp. lyrata] gi|297334727|gb|EFH65145.1| hypothetical protein ARALYDRAFT_476397 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 365 bits (937), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 183/308 (59%), Positives = 226/308 (73%), Gaps = 8/308 (2%)
Query: 1 MAGTAFPSTLVIQTSHISFTSQKKSFELANPSSLIFNFEKKVLFRCSAKKKISFVDQILD 60
MAGT+ PS L+ Q + F S + E + + K+ RC AKKKISFVDQILD
Sbjct: 1 MAGTSLPSCLLSQGPSLLFCSSNQVSE--TKCRIGISSGKRCRVRCLAKKKISFVDQILD 58
Query: 61 YIEGGPKLRKWYGAPDLLPKDGSNEED------EEKEDEFPEARDAVLVTDGDSDIGQMV 114
YIEGGPKLRKWYGAP+L PKDGS D EE +D+ D V VTDGDSD+GQM+
Sbjct: 59 YIEGGPKLRKWYGAPELRPKDGSLSGDDDEFEAEEAKDDLDGENDVVFVTDGDSDLGQMI 118
Query: 115 ILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEGFI 174
IL LIVK TR+KALVKDKR A+E+FG+YVE +GDAS+++FLK A +GV ++I P+EGF+
Sbjct: 119 ILQLIVKGTRVKALVKDKRKALEAFGSYVELTSGDASDERFLKKAFKGVGAVISPTEGFL 178
Query: 175 SNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMASGIPYTIIRTGV 234
N S +GV+H +LLSQLSVY SGGIQA+M A+KLAEQDE+ +++S +PYTIIRTG
Sbjct: 179 PNVKSFRGVKHAVLLSQLSVYESSGGIQAMMNNKAKKLAEQDENAVISSNVPYTIIRTGK 238
Query: 235 LQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVVNGEEKVSDWKK 294
L+N+PGG QGF F G AA GS+SKEDAA ICVEAL IP TGLIFEV NGEE VSDW+
Sbjct: 239 LENSPGGNQGFNFNAGAAAKGSISKEDAARICVEALSVIPPTGLIFEVTNGEEVVSDWEG 298
Query: 295 CFSRLMEK 302
++M++
Sbjct: 299 QLMKVMQR 306
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|79321173|ref|NP_001031269.1| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana] gi|332197231|gb|AEE35352.1| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 361 bits (927), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 188/307 (61%), Positives = 231/307 (75%), Gaps = 6/307 (1%)
Query: 1 MAGTAFPSTLVIQTSHISFTSQKKSFELANPSSLIFNFEKKVLFRCSAKKKISFVDQILD 60
MAGT+ PS L+ Q + F+S + E AN + K+ L RC AKKKISFVDQILD
Sbjct: 1 MAGTSLPSCLLSQGPSLLFSSSNQDSE-ANKCRIGITSGKRCLVRCFAKKKISFVDQILD 59
Query: 61 YIEGGPKLRKWYGAPDLLPKDGS-----NEEDEEKEDEFPEARDAVLVTDGDSDIGQMVI 115
YIEGGPKLRKWYGAP+L PKDGS +E +EEKED+ +D V VTDGDSD+GQM+I
Sbjct: 60 YIEGGPKLRKWYGAPELRPKDGSLSGDDDEFEEEKEDDLDGEKDVVFVTDGDSDLGQMII 119
Query: 116 LSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEGFIS 175
L LIVK TR+KALVKDKR A+E+FG+YVE GDAS+++FLK A +GV ++I P+EGF+S
Sbjct: 120 LQLIVKGTRVKALVKDKRKALEAFGSYVELTTGDASDERFLKKAFKGVGAVISPTEGFLS 179
Query: 176 NAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMASGIPYTIIRTGVL 235
S +GV+H +LLSQLSVY SGGIQA+M A+KLAEQDE+ ++S +PYTIIRTG L
Sbjct: 180 IVKSFRGVKHAVLLSQLSVYESSGGIQAMMNSKAKKLAEQDENAAISSNVPYTIIRTGKL 239
Query: 236 QNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVVNGEEKVSDWKKC 295
+N+PGG QGF F G AA GS+SKEDAA ICVEAL IP TGLIFEV NGEE VSDW+
Sbjct: 240 ENSPGGSQGFNFSAGAAAKGSISKEDAARICVEALSVIPPTGLIFEVTNGEEVVSDWEGQ 299
Query: 296 FSRLMEK 302
++M++
Sbjct: 300 LMKVMQR 306
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 305 | ||||||
| TAIR|locus:2030270 | 312 | AT1G72640 [Arabidopsis thalian | 0.986 | 0.964 | 0.577 | 2.9e-87 | |
| TAIR|locus:2015651 | 598 | HCF173 "high chlorophyll fluor | 0.278 | 0.142 | 0.360 | 6.2e-05 | |
| TAIR|locus:2185228 | 253 | AT5G02240 [Arabidopsis thalian | 0.416 | 0.501 | 0.259 | 8.6e-05 |
| TAIR|locus:2030270 AT1G72640 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 872 (312.0 bits), Expect = 2.9e-87, P = 2.9e-87
Identities = 178/308 (57%), Positives = 217/308 (70%)
Query: 1 MAGTAFPSTLVIQTSHISFTSQKKSFELANPSSLIFNFEKKVLFRCSAKKKISFVDQILD 60
MAGT+ PS L+ Q + F+S + E AN + K+ L RC AKKKISFVDQILD
Sbjct: 1 MAGTSLPSCLLSQGPSLLFSSSNQDSE-ANKCRIGITSGKRCLVRCFAKKKISFVDQILD 59
Query: 61 YIEGGPKLRKWYGAPDLLPKXXXXXXXXXXXXXXXXXXX------AVLVTDGDSDIGQMV 114
YIEGGPKLRKWYGAP+L PK V VTDGDSD+GQM+
Sbjct: 60 YIEGGPKLRKWYGAPELRPKDGSLSGDDDEFEAEEKEDDLDGEKDVVFVTDGDSDLGQMI 119
Query: 115 ILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEGFI 174
IL LIVK TR+KALVKDKR A+E+FG+YVE GDAS+++FLK A +GV ++I P+EGF+
Sbjct: 120 ILQLIVKGTRVKALVKDKRKALEAFGSYVELTTGDASDERFLKKAFKGVGAVISPTEGFL 179
Query: 175 SNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMASGIPYTIIRTGV 234
S S +GV+H +LLSQLSVY SGGIQA+M A+KLAEQDE+ ++S +PYTIIRTG
Sbjct: 180 SIVKSFRGVKHAVLLSQLSVYESSGGIQAMMNSKAKKLAEQDENAAISSNVPYTIIRTGK 239
Query: 235 LQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVVNGEEKVSDWKK 294
L+N+PGG QGF F G AA GS+SKEDAA ICVEAL IP TGLIFEV NGEE VSDW+
Sbjct: 240 LENSPGGSQGFNFSAGAAAKGSISKEDAARICVEALSVIPPTGLIFEVTNGEEVVSDWEG 299
Query: 295 CFSRLMEK 302
++M++
Sbjct: 300 QLMKVMQR 307
|
|
| TAIR|locus:2015651 HCF173 "high chlorophyll fluorescence phenotype 173" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 125 (49.1 bits), Expect = 6.2e-05, P = 6.2e-05
Identities = 31/86 (36%), Positives = 44/86 (51%)
Query: 197 GSGGIQALMKGNARKLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGS 256
GSG ++A + K E L SG+ YTIIR G L+ PGG++ F++G +
Sbjct: 476 GSG-VEANRREQVLKAKRAGEDSLRRSGLGYTIIRPGPLKEEPGGQRALIFDQGNRISQG 534
Query: 257 LSKEDAAFICVEALESIPQTGLIFEV 282
+S D A ICV+AL F+V
Sbjct: 535 ISCADVADICVKALHDSTARNKSFDV 560
|
|
| TAIR|locus:2185228 AT5G02240 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 104 (41.7 bits), Expect = 8.6e-05, Sum P(2) = 8.6e-05
Identities = 35/135 (25%), Positives = 60/135 (44%)
Query: 176 NAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMASGIPYTIIRTGVL 235
+A + GV+H++++ + + L GN + E L SG PYTIIR G L
Sbjct: 118 DAAKVAGVKHIVVVGSMGGTNPDHPLNKLGNGNILVWKRKAEQYLADSGTPYTIIRAGGL 177
Query: 236 QNTPGGKQ----GFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVVNGEEKVS- 290
+ GG + G E ++ + D A +C++AL F++ + E S
Sbjct: 178 LDKEGGVRELLVGKDDELLQTDTKTVPRADVAEVCIQALLFEEAKNKAFDLGSKPEGTST 237
Query: 291 ---DWKKCFSRLMEK 302
D+K FS++ +
Sbjct: 238 PTKDFKALFSQVTSR 252
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
| Your Input: |  |
 |
 |
 |
 |
 |
 |
 |
 |
||
 | gw1.III.2689.1 | hypothetical protein (262 aa) | |||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sorry, there are no predicted associations at the current settings. | |||||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 305 | |||
| pfam13460 | 182 | pfam13460, NAD_binding_10, NADH(P)-binding | 1e-15 | |
| cd05243 | 203 | cd05243, SDR_a5, atypical (a) SDRs, subgroup 5 | 2e-15 | |
| cd05269 | 272 | cd05269, TMR_SDR_a, triphenylmethane reductase (TM | 1e-06 | |
| COG0702 | 275 | COG0702, COG0702, Predicted nucleoside-diphosphate | 2e-06 | |
| cd05251 | 242 | cd05251, NmrA_like_SDR_a, NmrA (a transcriptional | 8e-06 | |
| cd05226 | 176 | cd05226, SDR_e_a, Extended (e) and atypical (a) SD | 2e-04 | |
| cd05231 | 259 | cd05231, NmrA_TMR_like_1_SDR_a, NmrA (a transcript | 0.002 | |
| PLN00141 | 251 | PLN00141, PLN00141, Tic62-NAD(P)-related group II | 0.002 |
| >gnl|CDD|222146 pfam13460, NAD_binding_10, NADH(P)-binding | Back alignment and domain information |
|---|
Score = 73.1 bits (180), Expect = 1e-15
Identities = 44/185 (23%), Positives = 79/185 (42%), Gaps = 18/185 (9%)
Query: 101 VLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTAL 160
+ V G+ ++ L+ + ++ AL ++ A T V+ D + L AL
Sbjct: 1 IAVIGATGKTGRRLVKELLARGHQVTALSRNPSKAPAPGVTPVQ---KDLFDLADLAEAL 57
Query: 161 RGVRSIIC--PSEGF-------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGN--- 208
GV +++ + + +A + GV+ ++++S +YR G L
Sbjct: 58 AGVDAVVDAFGARPDDSDGVKHLLDAAARAGVRRIVVVSAAGLYRDEPGTFRLDDAPLFP 117
Query: 209 --ARKLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFIC 266
AR A +E +L ASG+ +TI+R G L + G E A S+S+ D A
Sbjct: 118 PYARAKAAAEE-LLRASGLDWTIVRPGALFDEEGETYEIGTEGDPAGESSISRADVAAAL 176
Query: 267 VEALE 271
++ LE
Sbjct: 177 LDELE 181
|
Length = 182 |
| >gnl|CDD|187554 cd05243, SDR_a5, atypical (a) SDRs, subgroup 5 | Back alignment and domain information |
|---|
Score = 73.0 bits (180), Expect = 2e-15
Identities = 54/206 (26%), Positives = 96/206 (46%), Gaps = 24/206 (11%)
Query: 101 VLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTAL 160
VLV +G+ V+ L+ + +++ALV+D A + E + GD ++ + L AL
Sbjct: 2 VLVVGATGKVGRHVVRELLDRGYQVRALVRDPSQAEKLEAAGAEVVVGDLTDAESLAAAL 61
Query: 161 RGVRSIIC-----PSEG----FISNAGSLK--------GVQHVILLSQLSVYRGSGGIQA 203
G+ ++I G + G++ GV+ +L+S + + S ++A
Sbjct: 62 EGIDAVISAAGSGGKGGPRTEAVDYDGNINLIDAAKKAGVKRFVLVSSIGADKPSHPLEA 121
Query: 204 LMKG-NARKLAEQDESMLMASGIPYTIIR-TGVLQNTPGGKQGFQFEEGCAANGSLSKED 261
L +A++ AE L ASG+ YTI+R G+ + G + +G +G +S+ D
Sbjct: 122 LGPYLDAKRKAED---YLRASGLDYTIVRPGGLTDDPAGTGRVVLGGDGTRLDGPISRAD 178
Query: 262 AAFICVEALESIPQT-GLIFEVVNGE 286
A + EAL P G FE+ G+
Sbjct: 179 VAEVLAEAL-DTPAAIGKTFELGGGD 203
|
This subgroup contains atypical SDRs, some of which are identified as putative NAD(P)-dependent epimerases, one as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif that is very similar to the extended SDRs, GXXGXXG, and binds NADP. Generally, this subgroup has poor conservation of the active site tetrad; however, individual sequences do contain matches to the YXXXK active site motif, the upstream Ser, and there is a highly conserved Asp in place of the usual active site Asn throughout the subgroup. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 203 |
| >gnl|CDD|187578 cd05269, TMR_SDR_a, triphenylmethane reductase (TMR)-like proteins, NMRa-like, atypical (a) SDRs | Back alignment and domain information |
|---|
Score = 48.4 bits (116), Expect = 1e-06
Identities = 51/172 (29%), Positives = 72/172 (41%), Gaps = 23/172 (13%)
Query: 102 LVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR 161
LVT +G V+ L+ K + ALV++ A VE GD + + L+ A
Sbjct: 2 LVTGATGKLGTAVVELLLAKVASVVALVRNPEKAKAFAADGVEVRQGDYDDPETLERAFE 61
Query: 162 GVRS--IICPS---------EGFISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR 210
GV +I PS + FI +A GV+H++ LS SG + AR
Sbjct: 62 GVDRLLLISPSDLEDRIQQHKNFI-DAAKQAGVKHIVYLS------ASGADEDSPFLLAR 114
Query: 211 KLAEQDESMLMASGIPYTIIRTGV-LQNTPGGKQGFQFEE---GCAANGSLS 258
E L ASGIPYTI+R G + N E G A +G ++
Sbjct: 115 DHG-ATEKYLEASGIPYTILRPGWFMDNLLEFLPSILEEGTIYGPAGDGKVA 165
|
TMR is an atypical NADP-binding protein of the SDR family. It lacks the active site residues of the SDRs but has a glycine rich NAD(P)-binding motif that matches the extended SDRs. Proteins in this subgroup however, are more similar in length to the classical SDRs. TMR was identified as a reducer of triphenylmethane dyes, important environmental pollutants. This subgroup also includes Escherichia coli NADPH-dependent quinine oxidoreductase (QOR2), which catalyzes two-electron reduction of quinone; but is unlikely to play a major role in protecting against quinone cytotoxicity. Atypical SDRs are distinct from classical SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 272 |
| >gnl|CDD|223774 COG0702, COG0702, Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 48.4 bits (115), Expect = 2e-06
Identities = 53/229 (23%), Positives = 84/229 (36%), Gaps = 33/229 (14%)
Query: 100 AVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA 159
+LVT +G V+ L+ + ++A V++ A G VE + GD + K L
Sbjct: 2 KILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALAGG-VEVVLGDLRDPKSLVAG 60
Query: 160 LRGV------RSIICPSEGFISNAGSL---------KGVQHVILLSQLSVYRGSGGIQAL 204
+GV ++ S+ F + + GV+H + LS L S A
Sbjct: 61 AKGVDGVLLISGLLDGSDAFRAVQVTAVVRAAEAAGAGVKHGVSLSVLGADAASPSALAR 120
Query: 205 MKGNARKLAEQDESMLMASGIPYTIIR-TGVLQNTPGGKQGFQFEEG----CAANGSLS- 258
K E+ L +SGIPYT +R G G LS
Sbjct: 121 AKAAV-------EAALRSSGIPYTTLRRAAFYLGAGAAFIEAAEAAGLPVIPRGIGRLSP 173
Query: 259 --KEDAAFICVEALESIPQTGLIFEVVNGEEKVSDWKKCFSRLMEKTGK 305
+D A AL++ G +E+ G E ++ + S L G+
Sbjct: 174 IAVDDVAEALAAALDAPATAGRTYELA-GPEALTLA-ELASGLDYTIGR 220
|
Length = 275 |
| >gnl|CDD|187561 cd05251, NmrA_like_SDR_a, NmrA (a transcriptional regulator) and HSCARG (an NADPH sensor) like proteins, atypical (a) SDRs | Back alignment and domain information |
|---|
Score = 45.7 bits (109), Expect = 8e-06
Identities = 40/187 (21%), Positives = 70/187 (37%), Gaps = 29/187 (15%)
Query: 101 VLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRN----AMESFGTYVESMAGDASNKKF 155
+LV G V+ +L+ +++AL +D + A+ + G VE + GD + +
Sbjct: 1 ILVFGATGKQGGSVVRALLKDPGFKVRALTRDPSSPAAKALAAPG--VEVVQGDLDDPES 58
Query: 156 LKTALRGVRSIIC---PSEGFIS----------NAGSLKGVQHVILLSQLSVYRGSGGI- 201
L+ AL+GV + E +A GVQH + S V + + +
Sbjct: 59 LEAALKGVYGVFLVTDFWEAGGEDEIAQGKNVVDAAKRAGVQHFVFSSVPDVEKLTLAVP 118
Query: 202 QALMKGNARKLAEQDESMLMASGIPYTIIRTGV-LQNTPGGKQGFQFEEGCAANGSLSKE 260
K E + ASG+P TI+R ++N + E+G
Sbjct: 119 HFDSKAEV-------EEYIRASGLPATILRPAFFMENFLTPPAPQKMEDGTLTLVLPLDP 171
Query: 261 DAAFICV 267
D +
Sbjct: 172 DTKLPMI 178
|
NmrA and HSCARG like proteins. NmrA is a negative transcriptional regulator of various fungi, involved in the post-translational modulation of the GATA-type transcription factor AreA. NmrA lacks the canonical GXXGXXG NAD-binding motif and has altered residues at the catalytic triad, including a Met instead of the critical Tyr residue. NmrA may bind nucleotides but appears to lack any dehydrogenase activity. HSCARG has been identified as a putative NADP-sensing molecule, and redistributes and restructures in response to NADPH/NADP ratios. Like NmrA, it lacks most of the active site residues of the SDR family, but has an NAD(P)-binding motif similar to the extended SDR family, GXXGXXG. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Atypical SDRs are distinct from classical SDRs. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 242 |
| >gnl|CDD|187537 cd05226, SDR_e_a, Extended (e) and atypical (a) SDRs | Back alignment and domain information |
|---|
Score = 41.2 bits (97), Expect = 2e-04
Identities = 33/152 (21%), Positives = 61/152 (40%), Gaps = 17/152 (11%)
Query: 101 VLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTAL 160
+L+ IG+ + L+ + + LV++ + + V + GD + L A+
Sbjct: 1 ILILGATGFIGRALARELLEQGHEVTLLVRNTKRLSKEDQEPVAVVEGDLRDLDSLSDAV 60
Query: 161 RGVRSIIC--------------PSEGFISNAGSLK--GVQHVILLSQLSVYRGSGGIQA- 203
+GV +I EG + + K GV+H I +S L Y
Sbjct: 61 QGVDVVIHLAGAPRDTRDFCEVDVEGTRNVLEAAKEAGVKHFIFISSLGAYGDLHEETEP 120
Query: 204 LMKGNARKLAEQDESMLMASGIPYTIIRTGVL 235
+ + E++L + +PYTI+R GV+
Sbjct: 121 SPSSPYLAVKAKTEAVLREASLPYTIVRPGVI 152
|
Extended or atypical short-chain dehydrogenases/reductases (SDRs, aka tyrosine-dependent oxidoreductases) are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 176 |
| >gnl|CDD|187542 cd05231, NmrA_TMR_like_1_SDR_a, NmrA (a transcriptional regulator) and triphenylmethane reductase (TMR) like proteins, subgroup 1, atypical (a) SDRs | Back alignment and domain information |
|---|
Score = 39.2 bits (92), Expect = 0.002
Identities = 47/227 (20%), Positives = 84/227 (37%), Gaps = 40/227 (17%)
Query: 101 VLVTDGDSDIGQMVILSLIVKRTRIKALVKD--KRNAMESFGTYVESMAGDASNKKFLKT 158
+LVT IG V +L+ ++ALV+ + A+ + G E + GD + L
Sbjct: 1 ILVTGATGRIGSKVATTLLEAGRPVRALVRSDERAAALAARG--AEVVVGDLDDPAVLAA 58
Query: 159 ALRGVRSI---ICPSEGFISNAGSLK------------GVQHVILLSQLSVYRGSGGIQA 203
AL GV ++ P+ + G ++ GV+ V+ LS + S
Sbjct: 59 ALAGVDAVFFLAPPAPTADARPGYVQAAEAFASALREAGVKRVVNLSSVGADPESP---- 114
Query: 204 LMKGNARKLAEQDESMLMASGIPYTIIRTG-VLQNT-----PGGKQG--FQFEEGCAANG 255
G R ++ +L +G+P +R ++N K G G
Sbjct: 115 --SGLIRGHWLMEQ-VLNWAGLPVVHLRPAWFMENLLSQAPSIRKAGVLALPFPGDGRLP 171
Query: 256 SLSKEDAAFICVEALESIPQTGLIFEVVN--GEEKVS--DWKKCFSR 298
++ +D A + + L P+ V G E ++ + SR
Sbjct: 172 PIATDDIARVAAKLLLD-PEWH-GHRVYELTGPEDLTMNEIAAALSR 216
|
Atypical SDRs related to NMRa, TMR, and HSCARG (an NADPH sensor). This subgroup resembles the SDRs and has a partially conserved characteristic [ST]GXXGXXG NAD-binding motif, but lacks the conserved active site residues. NmrA is a negative transcriptional regulator of various fungi, involved in the post-translational modulation of the GATA-type transcription factor AreA. NmrA lacks the canonical GXXGXXG NAD-binding motif and has altered residues at the catalytic triad, including a Met instead of the critical Tyr residue. NmrA may bind nucleotides but appears to lack any dehydrogenase activity. HSCARG has been identified as a putative NADP-sensing molecule, and redistributes and restructures in response to NADPH/NADP ratios. Like NmrA, it lacks most of the active site residues of the SDR family, but has an NAD(P)-binding motif similar to the extended SDR family, GXXGXXG. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Atypical SDRs are distinct from classical SDRs. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 259 |
| >gnl|CDD|215072 PLN00141, PLN00141, Tic62-NAD(P)-related group II protein; Provisional | Back alignment and domain information |
|---|
Score = 38.7 bits (90), Expect = 0.002
Identities = 54/218 (24%), Positives = 83/218 (38%), Gaps = 33/218 (15%)
Query: 84 NEEDEEKEDEFPEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF--GT 141
+ +ED V V G+ ++ L+ K +KA V+D A S
Sbjct: 3 EGAEASEEDAENVKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLPQDP 62
Query: 142 YVESMAGDASN--KKFLKTALRGVRSIICPSEGF-----------ISNAGSLK------- 181
++ + D + K ++ ++IC + GF + N G++
Sbjct: 63 SLQIVRADVTEGSDKLVEAIGDDSDAVICAT-GFRRSFDPFAPWKVDNFGTVNLVEACRK 121
Query: 182 -GVQHVILLSQLSVYRGSGGIQALMKG----NARKLAE----QDESMLMASGIPYTIIRT 232
GV IL+S + V G+ Q L N L Q E + SGI YTI+R
Sbjct: 122 AGVTRFILVSSILV-NGAAMGQILNPAYIFLNLFGLTLVAKLQAEKYIRKSGINYTIVRP 180
Query: 233 GVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEAL 270
G L N P E GS+S++ A + VEAL
Sbjct: 181 GGLTNDPPTGNIVMEPEDTLYEGSISRDQVAEVAVEAL 218
|
Length = 251 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 305 | |||
| CHL00194 | 317 | ycf39 Ycf39; Provisional | 99.95 | |
| PF13460 | 183 | NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X | 99.93 | |
| TIGR03649 | 285 | ergot_EASG ergot alkaloid biosynthesis protein, AF | 99.92 | |
| PLN00141 | 251 | Tic62-NAD(P)-related group II protein; Provisional | 99.92 | |
| PLN02427 | 386 | UDP-apiose/xylose synthase | 99.91 | |
| PLN02657 | 390 | 3,8-divinyl protochlorophyllide a 8-vinyl reductas | 99.91 | |
| KOG1502 | 327 | consensus Flavonol reductase/cinnamoyl-CoA reducta | 99.91 | |
| PRK15181 | 348 | Vi polysaccharide biosynthesis protein TviC; Provi | 99.9 | |
| PLN03209 | 576 | translocon at the inner envelope of chloroplast su | 99.9 | |
| PF01073 | 280 | 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso | 99.9 | |
| PF05368 | 233 | NmrA: NmrA-like family; InterPro: IPR008030 NmrA i | 99.9 | |
| PLN00016 | 378 | RNA-binding protein; Provisional | 99.9 | |
| COG1087 | 329 | GalE UDP-glucose 4-epimerase [Cell envelope biogen | 99.9 | |
| PLN02695 | 370 | GDP-D-mannose-3',5'-epimerase | 99.89 | |
| PLN02214 | 342 | cinnamoyl-CoA reductase | 99.88 | |
| PRK11908 | 347 | NAD-dependent epimerase/dehydratase family protein | 99.88 | |
| PLN02986 | 322 | cinnamyl-alcohol dehydrogenase family protein | 99.88 | |
| PLN02662 | 322 | cinnamyl-alcohol dehydrogenase family protein | 99.88 | |
| PLN02572 | 442 | UDP-sulfoquinovose synthase | 99.87 | |
| TIGR03466 | 328 | HpnA hopanoid-associated sugar epimerase. The sequ | 99.86 | |
| PLN02650 | 351 | dihydroflavonol-4-reductase | 99.86 | |
| PRK10217 | 355 | dTDP-glucose 4,6-dehydratase; Provisional | 99.86 | |
| PLN02989 | 325 | cinnamyl-alcohol dehydrogenase family protein | 99.86 | |
| PRK08125 | 660 | bifunctional UDP-glucuronic acid decarboxylase/UDP | 99.86 | |
| PLN02583 | 297 | cinnamoyl-CoA reductase | 99.85 | |
| COG1086 | 588 | Predicted nucleoside-diphosphate sugar epimerases | 99.85 | |
| TIGR01472 | 343 | gmd GDP-mannose 4,6-dehydratase. Excluded from thi | 99.85 | |
| TIGR01214 | 287 | rmlD dTDP-4-dehydrorhamnose reductase. This enzyme | 99.84 | |
| PLN00198 | 338 | anthocyanidin reductase; Provisional | 99.84 | |
| TIGR02622 | 349 | CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member | 99.84 | |
| PF01370 | 236 | Epimerase: NAD dependent epimerase/dehydratase fam | 99.84 | |
| PLN02686 | 367 | cinnamoyl-CoA reductase | 99.84 | |
| PLN02896 | 353 | cinnamyl-alcohol dehydrogenase | 99.84 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 99.84 | |
| PRK05865 | 854 | hypothetical protein; Provisional | 99.84 | |
| COG0451 | 314 | WcaG Nucleoside-diphosphate-sugar epimerases [Cell | 99.83 | |
| TIGR03589 | 324 | PseB UDP-N-acetylglucosamine 4,6-dehydratase. This | 99.83 | |
| PLN02166 | 436 | dTDP-glucose 4,6-dehydratase | 99.83 | |
| TIGR01181 | 317 | dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This | 99.83 | |
| PRK10675 | 338 | UDP-galactose-4-epimerase; Provisional | 99.83 | |
| PLN02206 | 442 | UDP-glucuronate decarboxylase | 99.83 | |
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 99.82 | |
| PRK09987 | 299 | dTDP-4-dehydrorhamnose reductase; Provisional | 99.82 | |
| PLN02240 | 352 | UDP-glucose 4-epimerase | 99.81 | |
| PLN02653 | 340 | GDP-mannose 4,6-dehydratase | 99.81 | |
| PRK10084 | 352 | dTDP-glucose 4,6 dehydratase; Provisional | 99.8 | |
| COG1088 | 340 | RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope | 99.8 | |
| TIGR01179 | 328 | galE UDP-glucose-4-epimerase. This enzyme intercon | 99.8 | |
| PRK11150 | 308 | rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro | 99.8 | |
| COG0702 | 275 | Predicted nucleoside-diphosphate-sugar epimerases | 99.8 | |
| TIGR01746 | 367 | Thioester-redct thioester reductase domain. It has | 99.79 | |
| PLN02725 | 306 | GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas | 99.79 | |
| TIGR01777 | 292 | yfcH conserved hypothetical protein TIGR01777. Thi | 99.79 | |
| PF02719 | 293 | Polysacc_synt_2: Polysaccharide biosynthesis prote | 99.78 | |
| COG2910 | 211 | Putative NADH-flavin reductase [General function p | 99.78 | |
| PLN02996 | 491 | fatty acyl-CoA reductase | 99.78 | |
| PRK12825 | 249 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.77 | |
| TIGR02197 | 314 | heptose_epim ADP-L-glycero-D-manno-heptose-6-epime | 99.76 | |
| PRK12429 | 258 | 3-hydroxybutyrate dehydrogenase; Provisional | 99.76 | |
| KOG2865 | 391 | consensus NADH:ubiquinone oxidoreductase, NDUFA9/3 | 99.76 | |
| COG1090 | 297 | Predicted nucleoside-diphosphate sugar epimerase [ | 99.75 | |
| PRK06482 | 276 | short chain dehydrogenase; Provisional | 99.75 | |
| PF04321 | 286 | RmlD_sub_bind: RmlD substrate binding domain; Inte | 99.75 | |
| PRK05875 | 276 | short chain dehydrogenase; Provisional | 99.75 | |
| PRK12320 | 699 | hypothetical protein; Provisional | 99.75 | |
| COG0300 | 265 | DltE Short-chain dehydrogenases of various substra | 99.74 | |
| PRK12828 | 239 | short chain dehydrogenase; Provisional | 99.74 | |
| KOG1203 | 411 | consensus Predicted dehydrogenase [Carbohydrate tr | 99.74 | |
| PRK08263 | 275 | short chain dehydrogenase; Provisional | 99.74 | |
| TIGR01963 | 255 | PHB_DH 3-hydroxybutyrate dehydrogenase. This model | 99.73 | |
| PRK13394 | 262 | 3-hydroxybutyrate dehydrogenase; Provisional | 99.73 | |
| PRK07825 | 273 | short chain dehydrogenase; Provisional | 99.73 | |
| PRK12826 | 251 | 3-ketoacyl-(acyl-carrier-protein) reductase; Revie | 99.73 | |
| COG1091 | 281 | RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo | 99.72 | |
| PRK07231 | 251 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.72 | |
| PRK06182 | 273 | short chain dehydrogenase; Validated | 99.72 | |
| PRK06180 | 277 | short chain dehydrogenase; Provisional | 99.72 | |
| PRK05653 | 246 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.72 | |
| PRK09291 | 257 | short chain dehydrogenase; Provisional | 99.72 | |
| KOG1430 | 361 | consensus C-3 sterol dehydrogenase/3-beta-hydroxys | 99.71 | |
| PRK06138 | 252 | short chain dehydrogenase; Provisional | 99.7 | |
| PRK07454 | 241 | short chain dehydrogenase; Provisional | 99.7 | |
| PRK09186 | 256 | flagellin modification protein A; Provisional | 99.7 | |
| PRK07326 | 237 | short chain dehydrogenase; Provisional | 99.7 | |
| PRK05557 | 248 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.69 | |
| PRK07666 | 239 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.69 | |
| PRK06914 | 280 | short chain dehydrogenase; Provisional | 99.69 | |
| PRK08063 | 250 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.69 | |
| PRK07904 | 253 | short chain dehydrogenase; Provisional | 99.69 | |
| PRK07775 | 274 | short chain dehydrogenase; Provisional | 99.69 | |
| PRK07523 | 255 | gluconate 5-dehydrogenase; Provisional | 99.69 | |
| PRK05876 | 275 | short chain dehydrogenase; Provisional | 99.69 | |
| COG4221 | 246 | Short-chain alcohol dehydrogenase of unknown speci | 99.68 | |
| PRK06179 | 270 | short chain dehydrogenase; Provisional | 99.68 | |
| KOG1371 | 343 | consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo | 99.68 | |
| PRK07074 | 257 | short chain dehydrogenase; Provisional | 99.68 | |
| PRK08219 | 227 | short chain dehydrogenase; Provisional | 99.68 | |
| PRK05993 | 277 | short chain dehydrogenase; Provisional | 99.68 | |
| PRK12829 | 264 | short chain dehydrogenase; Provisional | 99.68 | |
| PRK07806 | 248 | short chain dehydrogenase; Provisional | 99.67 | |
| PRK12939 | 250 | short chain dehydrogenase; Provisional | 99.67 | |
| PRK12827 | 249 | short chain dehydrogenase; Provisional | 99.67 | |
| TIGR03206 | 250 | benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr | 99.67 | |
| PRK07060 | 245 | short chain dehydrogenase; Provisional | 99.67 | |
| PRK07067 | 257 | sorbitol dehydrogenase; Provisional | 99.67 | |
| PRK10538 | 248 | malonic semialdehyde reductase; Provisional | 99.67 | |
| PRK06841 | 255 | short chain dehydrogenase; Provisional | 99.67 | |
| PRK05565 | 247 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.66 | |
| PRK12823 | 260 | benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat | 99.65 | |
| PRK08628 | 258 | short chain dehydrogenase; Provisional | 99.65 | |
| PRK12746 | 254 | short chain dehydrogenase; Provisional | 99.65 | |
| PRK07024 | 257 | short chain dehydrogenase; Provisional | 99.65 | |
| TIGR01832 | 248 | kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod | 99.65 | |
| PRK05650 | 270 | short chain dehydrogenase; Provisional | 99.65 | |
| PRK08017 | 256 | oxidoreductase; Provisional | 99.65 | |
| PRK08220 | 252 | 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | 99.64 | |
| PRK12384 | 259 | sorbitol-6-phosphate dehydrogenase; Provisional | 99.64 | |
| PRK08339 | 263 | short chain dehydrogenase; Provisional | 99.64 | |
| PRK12745 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.64 | |
| PRK07577 | 234 | short chain dehydrogenase; Provisional | 99.64 | |
| KOG1429 | 350 | consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro | 99.64 | |
| PRK12936 | 245 | 3-ketoacyl-(acyl-carrier-protein) reductase NodG; | 99.64 | |
| PRK12935 | 247 | acetoacetyl-CoA reductase; Provisional | 99.64 | |
| PRK07102 | 243 | short chain dehydrogenase; Provisional | 99.64 | |
| PRK07063 | 260 | short chain dehydrogenase; Provisional | 99.63 | |
| PRK07478 | 254 | short chain dehydrogenase; Provisional | 99.63 | |
| PRK06935 | 258 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 99.63 | |
| PRK06124 | 256 | gluconate 5-dehydrogenase; Provisional | 99.63 | |
| PRK12824 | 245 | acetoacetyl-CoA reductase; Provisional | 99.63 | |
| PRK08267 | 260 | short chain dehydrogenase; Provisional | 99.63 | |
| PRK08264 | 238 | short chain dehydrogenase; Validated | 99.63 | |
| PRK05866 | 293 | short chain dehydrogenase; Provisional | 99.63 | |
| PRK06077 | 252 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.62 | |
| PRK06181 | 263 | short chain dehydrogenase; Provisional | 99.62 | |
| PRK12481 | 251 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 99.62 | |
| PRK07109 | 334 | short chain dehydrogenase; Provisional | 99.62 | |
| PRK07774 | 250 | short chain dehydrogenase; Provisional | 99.62 | |
| PRK08265 | 261 | short chain dehydrogenase; Provisional | 99.62 | |
| PRK08085 | 254 | gluconate 5-dehydrogenase; Provisional | 99.62 | |
| PRK06114 | 254 | short chain dehydrogenase; Provisional | 99.62 | |
| PRK06128 | 300 | oxidoreductase; Provisional | 99.61 | |
| PRK08251 | 248 | short chain dehydrogenase; Provisional | 99.61 | |
| PRK07890 | 258 | short chain dehydrogenase; Provisional | 99.61 | |
| PRK06523 | 260 | short chain dehydrogenase; Provisional | 99.61 | |
| PRK06398 | 258 | aldose dehydrogenase; Validated | 99.61 | |
| PRK06463 | 255 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.61 | |
| PRK07097 | 265 | gluconate 5-dehydrogenase; Provisional | 99.6 | |
| PLN02778 | 298 | 3,5-epimerase/4-reductase | 99.6 | |
| PRK12937 | 245 | short chain dehydrogenase; Provisional | 99.6 | |
| PRK08642 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.6 | |
| TIGR01829 | 242 | AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy | 99.6 | |
| PRK06139 | 330 | short chain dehydrogenase; Provisional | 99.6 | |
| PRK07856 | 252 | short chain dehydrogenase; Provisional | 99.6 | |
| PRK06550 | 235 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.6 | |
| PRK12743 | 256 | oxidoreductase; Provisional | 99.6 | |
| PRK08643 | 256 | acetoin reductase; Validated | 99.6 | |
| PRK05786 | 238 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.6 | |
| PRK08277 | 278 | D-mannonate oxidoreductase; Provisional | 99.59 | |
| PRK06172 | 253 | short chain dehydrogenase; Provisional | 99.59 | |
| PRK08213 | 259 | gluconate 5-dehydrogenase; Provisional | 99.59 | |
| PRK06701 | 290 | short chain dehydrogenase; Provisional | 99.59 | |
| PLN02503 | 605 | fatty acyl-CoA reductase 2 | 99.59 | |
| PRK09134 | 258 | short chain dehydrogenase; Provisional | 99.59 | |
| PRK08324 | 681 | short chain dehydrogenase; Validated | 99.59 | |
| PRK05693 | 274 | short chain dehydrogenase; Provisional | 99.59 | |
| PF07993 | 249 | NAD_binding_4: Male sterility protein; InterPro: I | 99.59 | |
| TIGR01830 | 239 | 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re | 99.59 | |
| PLN02253 | 280 | xanthoxin dehydrogenase | 99.59 | |
| PRK07062 | 265 | short chain dehydrogenase; Provisional | 99.58 | |
| PRK08589 | 272 | short chain dehydrogenase; Validated | 99.58 | |
| PRK06101 | 240 | short chain dehydrogenase; Provisional | 99.58 | |
| PRK05867 | 253 | short chain dehydrogenase; Provisional | 99.58 | |
| PRK09072 | 263 | short chain dehydrogenase; Provisional | 99.58 | |
| PRK06947 | 248 | glucose-1-dehydrogenase; Provisional | 99.58 | |
| PRK07035 | 252 | short chain dehydrogenase; Provisional | 99.57 | |
| PRK08340 | 259 | glucose-1-dehydrogenase; Provisional | 99.57 | |
| PRK09242 | 257 | tropinone reductase; Provisional | 99.57 | |
| PRK06483 | 236 | dihydromonapterin reductase; Provisional | 99.57 | |
| PRK09135 | 249 | pteridine reductase; Provisional | 99.57 | |
| PRK06949 | 258 | short chain dehydrogenase; Provisional | 99.57 | |
| PRK12938 | 246 | acetyacetyl-CoA reductase; Provisional | 99.57 | |
| PRK08416 | 260 | 7-alpha-hydroxysteroid dehydrogenase; Provisional | 99.56 | |
| PRK05717 | 255 | oxidoreductase; Validated | 99.56 | |
| PRK06113 | 255 | 7-alpha-hydroxysteroid dehydrogenase; Validated | 99.56 | |
| TIGR03443 | 1389 | alpha_am_amid L-aminoadipate-semialdehyde dehydrog | 99.56 | |
| PRK07576 | 264 | short chain dehydrogenase; Provisional | 99.55 | |
| PRK06196 | 315 | oxidoreductase; Provisional | 99.55 | |
| PRK08217 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.55 | |
| PRK12748 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.55 | |
| PRK07985 | 294 | oxidoreductase; Provisional | 99.55 | |
| PRK07814 | 263 | short chain dehydrogenase; Provisional | 99.55 | |
| PRK06194 | 287 | hypothetical protein; Provisional | 99.55 | |
| KOG0747 | 331 | consensus Putative NAD+-dependent epimerases [Carb | 99.54 | |
| TIGR02415 | 254 | 23BDH acetoin reductases. One member of this famil | 99.54 | |
| PRK07041 | 230 | short chain dehydrogenase; Provisional | 99.54 | |
| PRK06057 | 255 | short chain dehydrogenase; Provisional | 99.53 | |
| PRK08936 | 261 | glucose-1-dehydrogenase; Provisional | 99.53 | |
| PRK08993 | 253 | 2-deoxy-D-gluconate 3-dehydrogenase; Validated | 99.53 | |
| PRK06924 | 251 | short chain dehydrogenase; Provisional | 99.53 | |
| PRK07023 | 243 | short chain dehydrogenase; Provisional | 99.53 | |
| PRK06123 | 248 | short chain dehydrogenase; Provisional | 99.53 | |
| PRK06500 | 249 | short chain dehydrogenase; Provisional | 99.53 | |
| PRK09730 | 247 | putative NAD(P)-binding oxidoreductase; Provisiona | 99.52 | |
| PRK12742 | 237 | oxidoreductase; Provisional | 99.52 | |
| PRK06171 | 266 | sorbitol-6-phosphate 2-dehydrogenase; Provisional | 99.52 | |
| PRK07069 | 251 | short chain dehydrogenase; Validated | 99.52 | |
| PRK08278 | 273 | short chain dehydrogenase; Provisional | 99.52 | |
| PRK07832 | 272 | short chain dehydrogenase; Provisional | 99.52 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 99.52 | |
| PRK08226 | 263 | short chain dehydrogenase; Provisional | 99.52 | |
| PRK06200 | 263 | 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog | 99.52 | |
| PRK06125 | 259 | short chain dehydrogenase; Provisional | 99.51 | |
| PRK12747 | 252 | short chain dehydrogenase; Provisional | 99.51 | |
| PRK07677 | 252 | short chain dehydrogenase; Provisional | 99.5 | |
| PRK07831 | 262 | short chain dehydrogenase; Provisional | 99.5 | |
| PRK06198 | 260 | short chain dehydrogenase; Provisional | 99.5 | |
| TIGR02632 | 676 | RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc | 99.5 | |
| KOG1205 | 282 | consensus Predicted dehydrogenase [Secondary metab | 99.5 | |
| COG3320 | 382 | Putative dehydrogenase domain of multifunctional n | 99.49 | |
| PRK05872 | 296 | short chain dehydrogenase; Provisional | 99.49 | |
| TIGR03325 | 262 | BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro | 99.49 | |
| PRK05855 | 582 | short chain dehydrogenase; Validated | 99.48 | |
| PRK12859 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.48 | |
| PRK12744 | 257 | short chain dehydrogenase; Provisional | 99.48 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 99.47 | |
| TIGR01831 | 239 | fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas | 99.47 | |
| PRK07791 | 286 | short chain dehydrogenase; Provisional | 99.46 | |
| PRK07792 | 306 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.46 | |
| PRK06079 | 252 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.46 | |
| PRK08703 | 239 | short chain dehydrogenase; Provisional | 99.46 | |
| PRK07578 | 199 | short chain dehydrogenase; Provisional | 99.46 | |
| PRK08945 | 247 | putative oxoacyl-(acyl carrier protein) reductase; | 99.46 | |
| PRK05599 | 246 | hypothetical protein; Provisional | 99.45 | |
| PLN02780 | 320 | ketoreductase/ oxidoreductase | 99.44 | |
| PRK05884 | 223 | short chain dehydrogenase; Provisional | 99.44 | |
| PRK07370 | 258 | enoyl-(acyl carrier protein) reductase; Validated | 99.42 | |
| PRK09009 | 235 | C factor cell-cell signaling protein; Provisional | 99.41 | |
| PRK06940 | 275 | short chain dehydrogenase; Provisional | 99.41 | |
| PRK08415 | 274 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.41 | |
| PRK08690 | 261 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.41 | |
| PRK08594 | 257 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.41 | |
| PRK06505 | 271 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.41 | |
| PRK12367 | 245 | short chain dehydrogenase; Provisional | 99.41 | |
| PRK06197 | 306 | short chain dehydrogenase; Provisional | 99.41 | |
| PRK06953 | 222 | short chain dehydrogenase; Provisional | 99.4 | |
| PRK07533 | 258 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.39 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 99.39 | |
| PRK06603 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.37 | |
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 99.37 | |
| TIGR02685 | 267 | pter_reduc_Leis pteridine reductase. Pteridine red | 99.36 | |
| PRK07453 | 322 | protochlorophyllide oxidoreductase; Validated | 99.36 | |
| PRK08177 | 225 | short chain dehydrogenase; Provisional | 99.36 | |
| KOG4288 | 283 | consensus Predicted oxidoreductase [General functi | 99.35 | |
| PRK08159 | 272 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.35 | |
| PRK08261 | 450 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.35 | |
| TIGR01500 | 256 | sepiapter_red sepiapterin reductase. This model de | 99.35 | |
| KOG4039 | 238 | consensus Serine/threonine kinase TIP30/CC3 [Signa | 99.33 | |
| PRK07984 | 262 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.33 | |
| KOG1431 | 315 | consensus GDP-L-fucose synthetase [Carbohydrate tr | 99.32 | |
| KOG1201 | 300 | consensus Hydroxysteroid 17-beta dehydrogenase 11 | 99.32 | |
| PRK06997 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.32 | |
| PRK08862 | 227 | short chain dehydrogenase; Provisional | 99.31 | |
| PRK05854 | 313 | short chain dehydrogenase; Provisional | 99.3 | |
| PRK07889 | 256 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.28 | |
| PRK08303 | 305 | short chain dehydrogenase; Provisional | 99.27 | |
| PRK07424 | 406 | bifunctional sterol desaturase/short chain dehydro | 99.27 | |
| TIGR01289 | 314 | LPOR light-dependent protochlorophyllide reductase | 99.26 | |
| KOG1611 | 249 | consensus Predicted short chain-type dehydrogenase | 99.22 | |
| smart00822 | 180 | PKS_KR This enzymatic domain is part of bacterial | 99.21 | |
| PLN00015 | 308 | protochlorophyllide reductase | 99.18 | |
| KOG0725 | 270 | consensus Reductases with broad range of substrate | 99.17 | |
| KOG1210 | 331 | consensus Predicted 3-ketosphinganine reductase [S | 99.17 | |
| PLN02730 | 303 | enoyl-[acyl-carrier-protein] reductase | 99.13 | |
| KOG1221 | 467 | consensus Acyl-CoA reductase [Lipid transport and | 99.1 | |
| PF08659 | 181 | KR: KR domain; InterPro: IPR013968 This domain is | 99.07 | |
| KOG1200 | 256 | consensus Mitochondrial/plastidial beta-ketoacyl-A | 99.06 | |
| KOG1208 | 314 | consensus Dehydrogenases with different specificit | 99.05 | |
| PF13561 | 241 | adh_short_C2: Enoyl-(Acyl carrier protein) reducta | 99.05 | |
| COG1089 | 345 | Gmd GDP-D-mannose dehydratase [Cell envelope bioge | 99.04 | |
| PF00106 | 167 | adh_short: short chain dehydrogenase alcohol dehyd | 99.03 | |
| PRK08309 | 177 | short chain dehydrogenase; Provisional | 99.02 | |
| KOG1014 | 312 | consensus 17 beta-hydroxysteroid dehydrogenase typ | 98.99 | |
| KOG4169 | 261 | consensus 15-hydroxyprostaglandin dehydrogenase an | 98.97 | |
| KOG1610 | 322 | consensus Corticosteroid 11-beta-dehydrogenase and | 98.95 | |
| COG1028 | 251 | FabG Dehydrogenases with different specificities ( | 98.9 | |
| KOG1207 | 245 | consensus Diacetyl reductase/L-xylulose reductase | 98.9 | |
| PRK06300 | 299 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.87 | |
| COG3967 | 245 | DltE Short-chain dehydrogenase involved in D-alani | 98.87 | |
| PRK12428 | 241 | 3-alpha-hydroxysteroid dehydrogenase; Provisional | 98.79 | |
| KOG1209 | 289 | consensus 1-Acyl dihydroxyacetone phosphate reduct | 98.75 | |
| COG1748 | 389 | LYS9 Saccharopine dehydrogenase and related protei | 98.67 | |
| TIGR02813 | 2582 | omega_3_PfaA polyketide-type polyunsaturated fatty | 98.64 | |
| PRK06720 | 169 | hypothetical protein; Provisional | 98.54 | |
| cd01078 | 194 | NAD_bind_H4MPT_DH NADP binding domain of methylene | 98.38 | |
| PF03435 | 386 | Saccharop_dh: Saccharopine dehydrogenase ; InterPr | 98.36 | |
| KOG2774 | 366 | consensus NAD dependent epimerase [General functio | 98.35 | |
| KOG3019 | 315 | consensus Predicted nucleoside-diphosphate sugar e | 98.29 | |
| KOG1478 | 341 | consensus 3-keto sterol reductase [Lipid transport | 98.27 | |
| COG0569 | 225 | TrkA K+ transport systems, NAD-binding component [ | 98.23 | |
| PTZ00325 | 321 | malate dehydrogenase; Provisional | 98.21 | |
| KOG1199 | 260 | consensus Short-chain alcohol dehydrogenase/3-hydr | 98.2 | |
| TIGR00715 | 256 | precor6x_red precorrin-6x reductase. This enzyme w | 98.2 | |
| PRK09620 | 229 | hypothetical protein; Provisional | 98.11 | |
| KOG1372 | 376 | consensus GDP-mannose 4,6 dehydratase [Carbohydrat | 98.07 | |
| PRK06732 | 229 | phosphopantothenate--cysteine ligase; Validated | 98.06 | |
| PLN00106 | 323 | malate dehydrogenase | 97.94 | |
| PRK13656 | 398 | trans-2-enoyl-CoA reductase; Provisional | 97.94 | |
| PRK12548 | 289 | shikimate 5-dehydrogenase; Provisional | 97.91 | |
| cd01336 | 325 | MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli | 97.91 | |
| PRK14874 | 334 | aspartate-semialdehyde dehydrogenase; Provisional | 97.88 | |
| PRK09496 | 453 | trkA potassium transporter peripheral membrane com | 97.87 | |
| PLN02968 | 381 | Probable N-acetyl-gamma-glutamyl-phosphate reducta | 97.87 | |
| KOG2733 | 423 | consensus Uncharacterized membrane protein [Functi | 97.84 | |
| PRK14982 | 340 | acyl-ACP reductase; Provisional | 97.84 | |
| PF02254 | 116 | TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg | 97.79 | |
| PRK05579 | 399 | bifunctional phosphopantothenoylcysteine decarboxy | 97.69 | |
| PRK05086 | 312 | malate dehydrogenase; Provisional | 97.62 | |
| PRK04148 | 134 | hypothetical protein; Provisional | 97.56 | |
| PLN02819 | 1042 | lysine-ketoglutarate reductase/saccharopine dehydr | 97.55 | |
| PRK00436 | 343 | argC N-acetyl-gamma-glutamyl-phosphate reductase; | 97.5 | |
| PRK09496 | 453 | trkA potassium transporter peripheral membrane com | 97.49 | |
| KOG1204 | 253 | consensus Predicted dehydrogenase [Secondary metab | 97.48 | |
| PF01488 | 135 | Shikimate_DH: Shikimate / quinate 5-dehydrogenase; | 97.46 | |
| PRK12475 | 338 | thiamine/molybdopterin biosynthesis MoeB-like prot | 97.46 | |
| PRK05671 | 336 | aspartate-semialdehyde dehydrogenase; Reviewed | 97.45 | |
| PRK10669 | 558 | putative cation:proton antiport protein; Provision | 97.39 | |
| TIGR01296 | 339 | asd_B aspartate-semialdehyde dehydrogenase (peptid | 97.39 | |
| PF01118 | 121 | Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi | 97.39 | |
| PRK07688 | 339 | thiamine/molybdopterin biosynthesis ThiF/MoeB-like | 97.35 | |
| COG0623 | 259 | FabI Enoyl-[acyl-carrier-protein] | 97.32 | |
| PRK08664 | 349 | aspartate-semialdehyde dehydrogenase; Reviewed | 97.27 | |
| COG3268 | 382 | Uncharacterized conserved protein [Function unknow | 97.25 | |
| TIGR01850 | 346 | argC N-acetyl-gamma-glutamyl-phosphate reductase, | 97.21 | |
| COG2085 | 211 | Predicted dinucleotide-binding enzymes [General fu | 97.2 | |
| PLN02383 | 344 | aspartate semialdehyde dehydrogenase | 97.17 | |
| TIGR02356 | 202 | adenyl_thiF thiazole biosynthesis adenylyltransfer | 97.15 | |
| PRK06129 | 308 | 3-hydroxyacyl-CoA dehydrogenase; Validated | 97.13 | |
| PRK03659 | 601 | glutathione-regulated potassium-efflux system prot | 97.12 | |
| TIGR00521 | 390 | coaBC_dfp phosphopantothenoylcysteine decarboxylas | 97.11 | |
| TIGR02114 | 227 | coaB_strep phosphopantothenate--cysteine ligase, s | 97.11 | |
| PF00899 | 135 | ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a | 97.08 | |
| cd00704 | 323 | MDH Malate dehydrogenase. Malate dehydrogenase (MD | 97.07 | |
| PRK14106 | 450 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 97.07 | |
| PF00056 | 141 | Ldh_1_N: lactate/malate dehydrogenase, NAD binding | 96.98 | |
| cd01065 | 155 | NAD_bind_Shikimate_DH NAD(P) binding domain of Shi | 96.96 | |
| TIGR01915 | 219 | npdG NADPH-dependent F420 reductase. This model re | 96.95 | |
| PF04127 | 185 | DFP: DNA / pantothenate metabolism flavoprotein; I | 96.94 | |
| PRK00048 | 257 | dihydrodipicolinate reductase; Provisional | 96.94 | |
| PRK00258 | 278 | aroE shikimate 5-dehydrogenase; Reviewed | 96.9 | |
| TIGR02853 | 287 | spore_dpaA dipicolinic acid synthetase, A subunit. | 96.85 | |
| TIGR01758 | 324 | MDH_euk_cyt malate dehydrogenase, NAD-dependent. T | 96.84 | |
| TIGR02354 | 200 | thiF_fam2 thiamine biosynthesis protein ThiF, fami | 96.83 | |
| PF03446 | 163 | NAD_binding_2: NAD binding domain of 6-phosphogluc | 96.82 | |
| TIGR02355 | 240 | moeB molybdopterin synthase sulfurylase MoeB. This | 96.76 | |
| TIGR00518 | 370 | alaDH alanine dehydrogenase. The family of known L | 96.7 | |
| PRK06019 | 372 | phosphoribosylaminoimidazole carboxylase ATPase su | 96.67 | |
| PF01113 | 124 | DapB_N: Dihydrodipicolinate reductase, N-terminus; | 96.64 | |
| PRK08762 | 376 | molybdopterin biosynthesis protein MoeB; Validated | 96.63 | |
| PRK05597 | 355 | molybdopterin biosynthesis protein MoeB; Validated | 96.63 | |
| cd01080 | 168 | NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of | 96.62 | |
| PRK08328 | 231 | hypothetical protein; Provisional | 96.62 | |
| COG0604 | 326 | Qor NADPH:quinone reductase and related Zn-depende | 96.59 | |
| cd00757 | 228 | ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1 | 96.59 | |
| PRK08306 | 296 | dipicolinate synthase subunit A; Reviewed | 96.57 | |
| PRK05690 | 245 | molybdopterin biosynthesis protein MoeB; Provision | 96.53 | |
| PRK08057 | 248 | cobalt-precorrin-6x reductase; Reviewed | 96.53 | |
| PRK11863 | 313 | N-acetyl-gamma-glutamyl-phosphate reductase; Provi | 96.51 | |
| cd01075 | 200 | NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l | 96.5 | |
| PRK08644 | 212 | thiamine biosynthesis protein ThiF; Provisional | 96.5 | |
| PF00670 | 162 | AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase | 96.49 | |
| PRK08223 | 287 | hypothetical protein; Validated | 96.48 | |
| PRK07878 | 392 | molybdopterin biosynthesis-like protein MoeZ; Vali | 96.48 | |
| cd01485 | 198 | E1-1_like Ubiquitin activating enzyme (E1), repeat | 96.47 | |
| PRK03562 | 621 | glutathione-regulated potassium-efflux system prot | 96.47 | |
| PRK08655 | 437 | prephenate dehydrogenase; Provisional | 96.36 | |
| cd08295 | 338 | double_bond_reductase_like Arabidopsis alkenal dou | 96.36 | |
| TIGR00978 | 341 | asd_EA aspartate-semialdehyde dehydrogenase (non-p | 96.35 | |
| TIGR01809 | 282 | Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO | 96.35 | |
| PF03807 | 96 | F420_oxidored: NADP oxidoreductase coenzyme F420-d | 96.34 | |
| TIGR01470 | 205 | cysG_Nterm siroheme synthase, N-terminal domain. T | 96.34 | |
| PRK06719 | 157 | precorrin-2 dehydrogenase; Validated | 96.33 | |
| PRK11199 | 374 | tyrA bifunctional chorismate mutase/prephenate deh | 96.32 | |
| COG0002 | 349 | ArgC Acetylglutamate semialdehyde dehydrogenase [A | 96.32 | |
| PRK15116 | 268 | sulfur acceptor protein CsdL; Provisional | 96.27 | |
| PRK06718 | 202 | precorrin-2 dehydrogenase; Reviewed | 96.27 | |
| PRK14618 | 328 | NAD(P)H-dependent glycerol-3-phosphate dehydrogena | 96.26 | |
| TIGR02825 | 325 | B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15 | 96.26 | |
| COG0026 | 375 | PurK Phosphoribosylaminoimidazole carboxylase (NCA | 96.23 | |
| cd08259 | 332 | Zn_ADH5 Alcohol dehydrogenases of the MDR family. | 96.23 | |
| PF02826 | 178 | 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy | 96.19 | |
| PRK10537 | 393 | voltage-gated potassium channel; Provisional | 96.19 | |
| PRK06598 | 369 | aspartate-semialdehyde dehydrogenase; Reviewed | 96.18 | |
| PRK12549 | 284 | shikimate 5-dehydrogenase; Reviewed | 96.17 | |
| cd01487 | 174 | E1_ThiF_like E1_ThiF_like. Member of superfamily o | 96.16 | |
| PRK13940 | 414 | glutamyl-tRNA reductase; Provisional | 96.16 | |
| PRK05600 | 370 | thiamine biosynthesis protein ThiF; Validated | 96.15 | |
| PRK05476 | 425 | S-adenosyl-L-homocysteine hydrolase; Provisional | 96.15 | |
| KOG0023 | 360 | consensus Alcohol dehydrogenase, class V [Secondar | 96.14 | |
| cd01483 | 143 | E1_enzyme_family Superfamily of activating enzymes | 96.13 | |
| PRK00045 | 423 | hemA glutamyl-tRNA reductase; Reviewed | 96.08 | |
| PRK09288 | 395 | purT phosphoribosylglycinamide formyltransferase 2 | 96.07 | |
| PRK00094 | 325 | gpsA NAD(P)H-dependent glycerol-3-phosphate dehydr | 96.07 | |
| PF13241 | 103 | NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_ | 96.04 | |
| cd01489 | 312 | Uba2_SUMO Ubiquitin activating enzyme (E1) subunit | 96.02 | |
| cd00755 | 231 | YgdL_like Family of activating enzymes (E1) of ubi | 96.02 | |
| TIGR01035 | 417 | hemA glutamyl-tRNA reductase. This enzyme, togethe | 96.01 | |
| cd01338 | 322 | MDH_choloroplast_like Chloroplast-like malate dehy | 96.0 | |
| PRK07411 | 390 | hypothetical protein; Validated | 96.0 | |
| cd05213 | 311 | NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain | 95.98 | |
| PRK14619 | 308 | NAD(P)H-dependent glycerol-3-phosphate dehydrogena | 95.97 | |
| PRK11559 | 296 | garR tartronate semialdehyde reductase; Provisiona | 95.97 | |
| TIGR00507 | 270 | aroE shikimate 5-dehydrogenase. This model finds p | 95.97 | |
| cd05294 | 309 | LDH-like_MDH_nadp A lactate dehydrogenases-like st | 95.95 | |
| cd00401 | 413 | AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado | 95.94 | |
| PRK06522 | 304 | 2-dehydropantoate 2-reductase; Reviewed | 95.93 | |
| COG0136 | 334 | Asd Aspartate-semialdehyde dehydrogenase [Amino ac | 95.89 | |
| TIGR01851 | 310 | argC_other N-acetyl-gamma-glutamyl-phosphate reduc | 95.89 | |
| cd08293 | 345 | PTGR2 Prostaglandin reductase. Prostaglandins and | 95.86 | |
| TIGR00872 | 298 | gnd_rel 6-phosphogluconate dehydrogenase (decarbox | 95.85 | |
| PF01210 | 157 | NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate | 95.84 | |
| PRK09260 | 288 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 95.82 | |
| PRK00066 | 315 | ldh L-lactate dehydrogenase; Reviewed | 95.82 | |
| PRK11880 | 267 | pyrroline-5-carboxylate reductase; Reviewed | 95.82 | |
| PLN02948 | 577 | phosphoribosylaminoimidazole carboxylase | 95.81 | |
| cd01492 | 197 | Aos1_SUMO Ubiquitin activating enzyme (E1) subunit | 95.8 | |
| PRK06249 | 313 | 2-dehydropantoate 2-reductase; Provisional | 95.8 | |
| PRK07066 | 321 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 95.8 | |
| PLN02494 | 477 | adenosylhomocysteinase | 95.8 | |
| PTZ00075 | 476 | Adenosylhomocysteinase; Provisional | 95.77 | |
| PRK06728 | 347 | aspartate-semialdehyde dehydrogenase; Provisional | 95.76 | |
| cd01484 | 234 | E1-2_like Ubiquitin activating enzyme (E1), repeat | 95.72 | |
| PF03721 | 185 | UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogen | 95.7 | |
| KOG1198 | 347 | consensus Zinc-binding oxidoreductase [Energy prod | 95.69 | |
| TIGR00936 | 406 | ahcY adenosylhomocysteinase. This enzyme hydrolyze | 95.67 | |
| cd08253 | 325 | zeta_crystallin Zeta-crystallin with NADP-dependen | 95.65 | |
| PRK06849 | 389 | hypothetical protein; Provisional | 95.63 | |
| COG0373 | 414 | HemA Glutamyl-tRNA reductase [Coenzyme metabolism] | 95.62 | |
| PRK05442 | 326 | malate dehydrogenase; Provisional | 95.62 | |
| PRK12921 | 305 | 2-dehydropantoate 2-reductase; Provisional | 95.61 | |
| PF13380 | 116 | CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5 | 95.6 | |
| PRK14027 | 283 | quinate/shikimate dehydrogenase; Provisional | 95.6 | |
| cd08294 | 329 | leukotriene_B4_DH_like 13-PGR is a bifunctional en | 95.59 | |
| PRK08040 | 336 | putative semialdehyde dehydrogenase; Provisional | 95.59 | |
| PLN00203 | 519 | glutamyl-tRNA reductase | 95.58 | |
| TIGR01759 | 323 | MalateDH-SF1 malate dehydrogenase. This model repr | 95.57 | |
| COG0240 | 329 | GpsA Glycerol-3-phosphate dehydrogenase [Energy pr | 95.56 | |
| PRK07877 | 722 | hypothetical protein; Provisional | 95.54 | |
| PF10727 | 127 | Rossmann-like: Rossmann-like domain; InterPro: IPR | 95.54 | |
| PLN03154 | 348 | putative allyl alcohol dehydrogenase; Provisional | 95.52 | |
| TIGR01142 | 380 | purT phosphoribosylglycinamide formyltransferase 2 | 95.52 | |
| KOG0172 | 445 | consensus Lysine-ketoglutarate reductase/saccharop | 95.51 | |
| PF02571 | 249 | CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: | 95.51 | |
| COG1064 | 339 | AdhP Zn-dependent alcohol dehydrogenases [General | 95.5 | |
| PRK07819 | 286 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 95.5 | |
| COG2130 | 340 | Putative NADP-dependent oxidoreductases [General f | 95.49 | |
| PRK06444 | 197 | prephenate dehydrogenase; Provisional | 95.49 | |
| PRK15461 | 296 | NADH-dependent gamma-hydroxybutyrate dehydrogenase | 95.48 | |
| PRK14192 | 283 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 95.48 | |
| PRK08229 | 341 | 2-dehydropantoate 2-reductase; Provisional | 95.46 | |
| PRK07531 | 495 | bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioe | 95.46 | |
| TIGR01745 | 366 | asd_gamma aspartate-semialdehyde dehydrogenase, ga | 95.46 | |
| PRK07417 | 279 | arogenate dehydrogenase; Reviewed | 95.43 | |
| PRK11064 | 415 | wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Pro | 95.42 | |
| cd08266 | 342 | Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam | 95.38 | |
| PRK02472 | 447 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 95.38 | |
| cd01337 | 310 | MDH_glyoxysomal_mitochondrial Glyoxysomal and mito | 95.36 | |
| cd05212 | 140 | NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom | 95.35 | |
| PF01262 | 168 | AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal | 95.34 | |
| TIGR01505 | 291 | tartro_sem_red 2-hydroxy-3-oxopropionate reductase | 95.32 | |
| PLN02928 | 347 | oxidoreductase family protein | 95.31 | |
| PRK09310 | 477 | aroDE bifunctional 3-dehydroquinate dehydratase/sh | 95.29 | |
| PRK12749 | 288 | quinate/shikimate dehydrogenase; Reviewed | 95.29 | |
| PRK13403 | 335 | ketol-acid reductoisomerase; Provisional | 95.23 | |
| cd08230 | 355 | glucose_DH Glucose dehydrogenase. Glucose dehydrog | 95.22 | |
| TIGR01161 | 352 | purK phosphoribosylaminoimidazole carboxylase, Pur | 95.2 | |
| PRK14175 | 286 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 95.17 | |
| cd05291 | 306 | HicDH_like L-2-hydroxyisocapronate dehydrogenases | 95.16 | |
| cd01486 | 307 | Apg7 Apg7 is an E1-like protein, that activates tw | 95.16 | |
| TIGR01772 | 312 | MDH_euk_gproteo malate dehydrogenase, NAD-dependen | 95.13 | |
| PRK14852 | 989 | hypothetical protein; Provisional | 95.08 | |
| PRK06130 | 311 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 95.04 | |
| TIGR03026 | 411 | NDP-sugDHase nucleotide sugar dehydrogenase. All o | 95.04 | |
| PRK14194 | 301 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 95.04 | |
| COG0169 | 283 | AroE Shikimate 5-dehydrogenase [Amino acid transpo | 95.04 | |
| PRK09599 | 301 | 6-phosphogluconate dehydrogenase-like protein; Rev | 95.03 | |
| PRK06223 | 307 | malate dehydrogenase; Reviewed | 94.98 | |
| PRK15469 | 312 | ghrA bifunctional glyoxylate/hydroxypyruvate reduc | 94.97 | |
| PRK12480 | 330 | D-lactate dehydrogenase; Provisional | 94.95 | |
| cd08250 | 329 | Mgc45594_like Mgc45594 gene product and other MDR | 94.91 | |
| PRK09424 | 509 | pntA NAD(P) transhydrogenase subunit alpha; Provis | 94.89 | |
| PLN02688 | 266 | pyrroline-5-carboxylate reductase | 94.89 | |
| PF02558 | 151 | ApbA: Ketopantoate reductase PanE/ApbA; InterPro: | 94.89 | |
| PRK08293 | 287 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 94.88 | |
| COG1179 | 263 | Dinucleotide-utilizing enzymes involved in molybdo | 94.87 | |
| PLN00112 | 444 | malate dehydrogenase (NADP); Provisional | 94.86 | |
| TIGR02717 | 447 | AcCoA-syn-alpha acetyl coenzyme A synthetase (ADP | 94.81 | |
| cd08292 | 324 | ETR_like_2 2-enoyl thioester reductase (ETR) like | 94.8 | |
| cd08243 | 320 | quinone_oxidoreductase_like_1 Quinone oxidoreducta | 94.79 | |
| cd05288 | 329 | PGDH Prostaglandin dehydrogenases. Prostaglandins | 94.79 | |
| COG0039 | 313 | Mdh Malate/lactate dehydrogenases [Energy producti | 94.77 |
| >CHL00194 ycf39 Ycf39; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.2e-26 Score=215.02 Aligned_cols=198 Identities=22% Similarity=0.251 Sum_probs=156.1
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEECCcc------
Q 021928 99 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG------ 172 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~g------ 172 (305)
|+|+||||||+||++++++|+++||+|++++|++++.......+++++.+|+.|.+++.++++++|+|||+.+.
T Consensus 1 MkIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l~~~~v~~v~~Dl~d~~~l~~al~g~d~Vi~~~~~~~~~~~ 80 (317)
T CHL00194 1 MSLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFLKEWGAELVYGDLSLPETLPPSFKGVTAIIDASTSRPSDLY 80 (317)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhhHhhcCCEEEECCCCCHHHHHHHHCCCCEEEECCCCCCCCcc
Confidence 58999999999999999999999999999999976543323346999999999999999999999999987221
Q ss_pred -----------hHhhhhhhcCCCEEEEEcccccccCCCCcccccchHHHHHHHHHHHHHHhCCCCEEEEecCCcccCC-C
Q 021928 173 -----------FISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMASGIPYTIIRTGVLQNTP-G 240 (305)
Q Consensus 173 -----------~~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~~~~~~aE~~l~~~gi~~tilRPg~l~~~~-~ 240 (305)
.+.+++++.+++|||++||.++.... ..+ ....+..+|+++++++++||++||+.+.... .
T Consensus 81 ~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~~~~~~~--~~~-----~~~~K~~~e~~l~~~~l~~tilRp~~~~~~~~~ 153 (317)
T CHL00194 81 NAKQIDWDGKLALIEAAKAAKIKRFIFFSILNAEQYP--YIP-----LMKLKSDIEQKLKKSGIPYTIFRLAGFFQGLIS 153 (317)
T ss_pred chhhhhHHHHHHHHHHHHHcCCCEEEEeccccccccC--CCh-----HHHHHHHHHHHHHHcCCCeEEEeecHHhhhhhh
Confidence 15567888999999999997553211 111 2234567899999999999999998754321 0
Q ss_pred -------CCcceeeecCCCCCCccCHHHHHHHHHHHhhCCCCCCcEEEEecCC-cCHHHHHHHHHHhhhhc
Q 021928 241 -------GKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVVNGE-EKVSDWKKCFSRLMEKT 303 (305)
Q Consensus 241 -------~~~~~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~~~~~~~~v~~g~-~s~~d~~~~~~~l~~~~ 303 (305)
......+..++....+|+++|+|++++.+++++...+++|++++++ .+++|+++.+.++++++
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~ni~g~~~~s~~el~~~~~~~~g~~ 224 (317)
T CHL00194 154 QYAIPILEKQPIWITNESTPISYIDTQDAAKFCLKSLSLPETKNKTFPLVGPKSWNSSEIISLCEQLSGQK 224 (317)
T ss_pred hhhhhhccCCceEecCCCCccCccCHHHHHHHHHHHhcCccccCcEEEecCCCccCHHHHHHHHHHHhCCC
Confidence 1222333344555788999999999999998877778999999876 59999999999999874
|
|
| >PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.7e-24 Score=183.13 Aligned_cols=170 Identities=29% Similarity=0.383 Sum_probs=136.4
Q ss_pred EEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEECCc---------
Q 021928 101 VLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE--------- 171 (305)
Q Consensus 101 vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~--------- 171 (305)
|+|+||||++|+.++++|+++|++|++++|++++..+ ..+++++.+|+.|.+++.++++++|+||++.+
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~--~~~~~~~~~d~~d~~~~~~al~~~d~vi~~~~~~~~~~~~~ 78 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED--SPGVEIIQGDLFDPDSVKAALKGADAVIHAAGPPPKDVDAA 78 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH--CTTEEEEESCTTCHHHHHHHHTTSSEEEECCHSTTTHHHHH
T ss_pred eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc--ccccccceeeehhhhhhhhhhhhcchhhhhhhhhccccccc
Confidence 7999999999999999999999999999999988766 67899999999999999999999999999843
Q ss_pred chHhhhhhhcCCCEEEEEcccccccCCCCccc-ccc---hHHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCCcceee
Q 021928 172 GFISNAGSLKGVQHVILLSQLSVYRGSGGIQA-LMK---GNARKLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQF 247 (305)
Q Consensus 172 g~~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~-~~~---~~~~~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~~~~~~ 247 (305)
..+.+++++.+++|+|++|+.+++........ ... ......+..+|+.+++++++||+|||+++++.......+..
T Consensus 79 ~~~~~a~~~~~~~~~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~ivrp~~~~~~~~~~~~~~~ 158 (183)
T PF13460_consen 79 KNIIEAAKKAGVKRVVYLSSAGVYRDPPGLFSDEDKPIFPEYARDKREAEEALRESGLNWTIVRPGWIYGNPSRSYRLIK 158 (183)
T ss_dssp HHHHHHHHHTTSSEEEEEEETTGTTTCTSEEEGGTCGGGHHHHHHHHHHHHHHHHSTSEEEEEEESEEEBTTSSSEEEES
T ss_pred ccccccccccccccceeeeccccCCCCCcccccccccchhhhHHHHHHHHHHHHhcCCCEEEEECcEeEeCCCcceeEEe
Confidence 12566788899999999999999875444211 000 12334456778999999999999999998877654332322
Q ss_pred ecCCCCCCccCHHHHHHHHHHHhhC
Q 021928 248 EEGCAANGSLSKEDAAFICVEALES 272 (305)
Q Consensus 248 ~~~~~~~~~Is~~DvA~~iv~~l~~ 272 (305)
..+.....+|+++|+|+++++++++
T Consensus 159 ~~~~~~~~~i~~~DvA~~~~~~l~~ 183 (183)
T PF13460_consen 159 EGGPQGVNFISREDVAKAIVEALEN 183 (183)
T ss_dssp STSTTSHCEEEHHHHHHHHHHHHH-
T ss_pred ccCCCCcCcCCHHHHHHHHHHHhCC
Confidence 2344557899999999999999874
|
... |
| >TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family | Back alignment and domain information |
|---|
Probab=99.92 E-value=5.8e-24 Score=193.71 Aligned_cols=189 Identities=16% Similarity=0.186 Sum_probs=149.7
Q ss_pred EEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHh------cC-ccEEEECCcc
Q 021928 100 AVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTAL------RG-VRSIICPSEG 172 (305)
Q Consensus 100 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~------~~-~d~Vi~~~~g 172 (305)
+|+||||||+||++++++|+++|++|++++|++++.. ..+++.+.+|+.|.+++.+++ ++ +|.|+++.+.
T Consensus 1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~---~~~~~~~~~d~~d~~~l~~a~~~~~~~~g~~d~v~~~~~~ 77 (285)
T TIGR03649 1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSA---GPNEKHVKFDWLDEDTWDNPFSSDDGMEPEISAVYLVAPP 77 (285)
T ss_pred CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCcccc---CCCCccccccCCCHHHHHHHHhcccCcCCceeEEEEeCCC
Confidence 4899999999999999999999999999999987543 235778899999999999999 67 9999977331
Q ss_pred ---------hHhhhhhhcCCCEEEEEcccccccCCCCcccccchHHHHHHHHHHHHHHhC-CCCEEEEecCCcccCCC--
Q 021928 173 ---------FISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMAS-GIPYTIIRTGVLQNTPG-- 240 (305)
Q Consensus 173 ---------~~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~~~~~~aE~~l~~~-gi~~tilRPg~l~~~~~-- 240 (305)
.+.+++++.|++|||++|+.+++.... .+...|+++++. +++||+|||++++++..
T Consensus 78 ~~~~~~~~~~~i~aa~~~gv~~~V~~Ss~~~~~~~~------------~~~~~~~~l~~~~gi~~tilRp~~f~~~~~~~ 145 (285)
T TIGR03649 78 IPDLAPPMIKFIDFARSKGVRRFVLLSASIIEKGGP------------AMGQVHAHLDSLGGVEYTVLRPTWFMENFSEE 145 (285)
T ss_pred CCChhHHHHHHHHHHHHcCCCEEEEeeccccCCCCc------------hHHHHHHHHHhccCCCEEEEeccHHhhhhccc
Confidence 256778899999999999876543211 012356778875 99999999998664321
Q ss_pred ------CCcc-eeeecCCCCCCccCHHHHHHHHHHHhhCCCCCCcEEEEecCC-cCHHHHHHHHHHhhhhc
Q 021928 241 ------GKQG-FQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVVNGE-EKVSDWKKCFSRLMEKT 303 (305)
Q Consensus 241 ------~~~~-~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~~~~~~~~v~~g~-~s~~d~~~~~~~l~~~~ 303 (305)
...+ +..+.++....+|+++|+|++++.++.++...++.|++.+++ .++.|+++.+++++|++
T Consensus 146 ~~~~~~~~~~~~~~~~g~~~~~~v~~~Dva~~~~~~l~~~~~~~~~~~l~g~~~~s~~eia~~l~~~~g~~ 216 (285)
T TIGR03649 146 FHVEAIRKENKIYSATGDGKIPFVSADDIARVAYRALTDKVAPNTDYVVLGPELLTYDDVAEILSRVLGRK 216 (285)
T ss_pred ccccccccCCeEEecCCCCccCcccHHHHHHHHHHHhcCCCcCCCeEEeeCCccCCHHHHHHHHHHHhCCc
Confidence 1112 222345666789999999999999999887778899999865 69999999999999875
|
This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi. |
| >PLN00141 Tic62-NAD(P)-related group II protein; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.6e-23 Score=184.70 Aligned_cols=201 Identities=26% Similarity=0.325 Sum_probs=144.9
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcC--CCcEEeecCCCC-HHHHHHHh-cCccEEEECCcc
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG--TYVESMAGDASN-KKFLKTAL-RGVRSIICPSEG 172 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~--~~v~~v~~D~~d-~~~~~~~~-~~~d~Vi~~~~g 172 (305)
.+|+|+||||+|+||++++++|+++|++|+++.|++++...... .+++++.+|+.| .+.+.+.+ .++|+||++++.
T Consensus 16 ~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d~~~~l~~~~~~~~d~vi~~~g~ 95 (251)
T PLN00141 16 KTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLPQDPSLQIVRADVTEGSDKLVEAIGDDSDAVICATGF 95 (251)
T ss_pred cCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcccCCceEEEEeeCCCCHHHHHHHhhcCCCEEEECCCC
Confidence 35899999999999999999999999999999999876443332 368999999998 57787888 689999987321
Q ss_pred ------------------hHhhhhhhcCCCEEEEEcccccccCCCCc---ccccchH----HHHHHHHHHHHHHhCCCCE
Q 021928 173 ------------------FISNAGSLKGVQHVILLSQLSVYRGSGGI---QALMKGN----ARKLAEQDESMLMASGIPY 227 (305)
Q Consensus 173 ------------------~~~~~a~~~gv~~~V~iSS~~~~~~~~~~---~~~~~~~----~~~~~~~aE~~l~~~gi~~ 227 (305)
.+.+++++.++++||++||.++|....+. ..|...+ ....+..+|+++++.++++
T Consensus 96 ~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~~v~g~~~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~~gi~~ 175 (251)
T PLN00141 96 RRSFDPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSILVNGAAMGQILNPAYIFLNLFGLTLVAKLQAEKYIRKSGINY 175 (251)
T ss_pred CcCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEEccccccCCCcccccCcchhHHHHHHHHHHHHHHHHHHHHhcCCcE
Confidence 13455677889999999999877532111 1111111 1223556788899999999
Q ss_pred EEEecCCcccCCCCCcceeeecCC-CCCCccCHHHHHHHHHHHhhCCCCCCcEEEEecCCcCH-HHHHHHHHH
Q 021928 228 TIIRTGVLQNTPGGKQGFQFEEGC-AANGSLSKEDAAFICVEALESIPQTGLIFEVVNGEEKV-SDWKKCFSR 298 (305)
Q Consensus 228 tilRPg~l~~~~~~~~~~~~~~~~-~~~~~Is~~DvA~~iv~~l~~~~~~~~~~~v~~g~~s~-~d~~~~~~~ 298 (305)
++||||++.+....+. +.....+ ...++|+++|+|+++++++.++...+.++.+.+.+... ..+.+++..
T Consensus 176 ~iirpg~~~~~~~~~~-~~~~~~~~~~~~~i~~~dvA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (251)
T PLN00141 176 TIVRPGGLTNDPPTGN-IVMEPEDTLYEGSISRDQVAEVAVEALLCPESSYKVVEIVARADAPKRSYKDLFAS 247 (251)
T ss_pred EEEECCCccCCCCCce-EEECCCCccccCcccHHHHHHHHHHHhcChhhcCcEEEEecCCCCCchhHHHHHHH
Confidence 9999999876544333 2222222 22468999999999999999888778899999855432 334444433
|
|
| >PLN02427 UDP-apiose/xylose synthase | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.4e-22 Score=192.55 Aligned_cols=205 Identities=15% Similarity=0.158 Sum_probs=147.0
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhC-CCeEEEEEcCcchhhhh-------cCCCcEEeecCCCCHHHHHHHhcCccEEEE
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVK-RTRIKALVKDKRNAMES-------FGTYVESMAGDASNKKFLKTALRGVRSIIC 168 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~R~~~~~~~~-------~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~ 168 (305)
.+|+||||||+||||++++++|+++ |++|++++|+.++.... ...+++++.+|+.|.+.+.++++++|+|||
T Consensus 13 ~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~d~ViH 92 (386)
T PLN02427 13 KPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKHDSRLEGLIKMADLTIN 92 (386)
T ss_pred cCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccccccCCCCeEEEEcCCCChHHHHHHhhcCCEEEE
Confidence 4589999999999999999999998 59999999876543221 123689999999999999999999999999
Q ss_pred CCc---c--h-----------------HhhhhhhcCCCEEEEEcccccccCCCC--------ccc---------------
Q 021928 169 PSE---G--F-----------------ISNAGSLKGVQHVILLSQLSVYRGSGG--------IQA--------------- 203 (305)
Q Consensus 169 ~~~---g--~-----------------~~~~a~~~gv~~~V~iSS~~~~~~~~~--------~~~--------------- 203 (305)
+++ . . +.+++++.+ ++||++||..+|..... ...
T Consensus 93 lAa~~~~~~~~~~~~~~~~~n~~gt~~ll~aa~~~~-~r~v~~SS~~vYg~~~~~~~~e~~p~~~~~~~~~~~e~~~~~~ 171 (386)
T PLN02427 93 LAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCEVYGKTIGSFLPKDHPLRQDPAFYVLKEDESPCI 171 (386)
T ss_pred cccccChhhhhhChHHHHHHHHHHHHHHHHHHHhcC-CEEEEEeeeeeeCCCcCCCCCcccccccccccccccccccccc
Confidence 842 0 0 234456666 89999999988863210 000
Q ss_pred cc-----chHHHHHHHHHHHHHHh----CCCCEEEEecCCcccCCC-------------------------CCccee-ee
Q 021928 204 LM-----KGNARKLAEQDESMLMA----SGIPYTIIRTGVLQNTPG-------------------------GKQGFQ-FE 248 (305)
Q Consensus 204 ~~-----~~~~~~~~~~aE~~l~~----~gi~~tilRPg~l~~~~~-------------------------~~~~~~-~~ 248 (305)
+. ...+...|..+|++++. .+++++++||+.+.+... .++.+. ++
T Consensus 172 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~g 251 (386)
T PLN02427 172 FGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRREPLKLVD 251 (386)
T ss_pred cCCCCccccchHHHHHHHHHHHHHHHhhcCCceEEecccceeCCCCCccccccccccccchHHHHHHHHHhcCCCeEEEC
Confidence 00 00122345566776653 689999999998554210 011111 22
Q ss_pred cCCCCCCccCHHHHHHHHHHHhhCCC-CCCcEEEEecC--CcCHHHHHHHHHHhhhh
Q 021928 249 EGCAANGSLSKEDAAFICVEALESIP-QTGLIFEVVNG--EEKVSDWKKCFSRLMEK 302 (305)
Q Consensus 249 ~~~~~~~~Is~~DvA~~iv~~l~~~~-~~~~~~~v~~g--~~s~~d~~~~~~~l~~~ 302 (305)
.+.....+|+++|+|++++.+++++. ..+++||++++ ..++.|+++.+.++.+.
T Consensus 252 ~g~~~r~~i~V~Dva~ai~~al~~~~~~~g~~yni~~~~~~~s~~el~~~i~~~~g~ 308 (386)
T PLN02427 252 GGQSQRTFVYIKDAIEAVLLMIENPARANGHIFNVGNPNNEVTVRQLAEMMTEVYAK 308 (386)
T ss_pred CCCceECcEeHHHHHHHHHHHHhCcccccCceEEeCCCCCCccHHHHHHHHHHHhcc
Confidence 33444689999999999999998764 45789999986 46899999999988764
|
|
| >PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase | Back alignment and domain information |
|---|
Probab=99.91 E-value=1e-22 Score=193.96 Aligned_cols=200 Identities=19% Similarity=0.256 Sum_probs=152.3
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhh------h--hcCCCcEEeecCCCCHHHHHHHhc----Cc
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM------E--SFGTYVESMAGDASNKKFLKTALR----GV 163 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~------~--~~~~~v~~v~~D~~d~~~~~~~~~----~~ 163 (305)
..+++|+||||+|+||++++++|+++|++|++++|+..+.. + ....+++++.+|++|.+++.++++ ++
T Consensus 58 ~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~~~ 137 (390)
T PLN02657 58 PKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSEGDPV 137 (390)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHhCCCC
Confidence 34689999999999999999999999999999999875421 0 112468999999999999999998 58
Q ss_pred cEEEECCcc-----------------hHhhhhhhcCCCEEEEEcccccccCCCCcccccchHHHHHHHHHHHHHHh--CC
Q 021928 164 RSIICPSEG-----------------FISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMA--SG 224 (305)
Q Consensus 164 d~Vi~~~~g-----------------~~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~~~~~~aE~~l~~--~g 224 (305)
|+||++++. .+.+++++.++++||++||.+++.+ ...| ...+...|++++. .+
T Consensus 138 D~Vi~~aa~~~~~~~~~~~vn~~~~~~ll~aa~~~gv~r~V~iSS~~v~~p---~~~~-----~~sK~~~E~~l~~~~~g 209 (390)
T PLN02657 138 DVVVSCLASRTGGVKDSWKIDYQATKNSLDAGREVGAKHFVLLSAICVQKP---LLEF-----QRAKLKFEAELQALDSD 209 (390)
T ss_pred cEEEECCccCCCCCccchhhHHHHHHHHHHHHHHcCCCEEEEEeeccccCc---chHH-----HHHHHHHHHHHHhccCC
Confidence 999987321 1456678889999999999987643 1112 2235567777775 89
Q ss_pred CCEEEEecCCcccCCC-------CCcce-eeecCCCC-CCccCHHHHHHHHHHHhhCCCCCCcEEEEecC--CcCHHHHH
Q 021928 225 IPYTIIRTGVLQNTPG-------GKQGF-QFEEGCAA-NGSLSKEDAAFICVEALESIPQTGLIFEVVNG--EEKVSDWK 293 (305)
Q Consensus 225 i~~tilRPg~l~~~~~-------~~~~~-~~~~~~~~-~~~Is~~DvA~~iv~~l~~~~~~~~~~~v~~g--~~s~~d~~ 293 (305)
++|++|||+.+..... .+..+ .++.++.. ..+|+++|+|++++.++.++...+++|+|.++ ..++.|++
T Consensus 210 l~~tIlRp~~~~~~~~~~~~~~~~g~~~~~~GdG~~~~~~~I~v~DlA~~i~~~~~~~~~~~~~~~Iggp~~~~S~~Eia 289 (390)
T PLN02657 210 FTYSIVRPTAFFKSLGGQVEIVKDGGPYVMFGDGKLCACKPISEADLASFIADCVLDESKINKVLPIGGPGKALTPLEQG 289 (390)
T ss_pred CCEEEEccHHHhcccHHHHHhhccCCceEEecCCcccccCceeHHHHHHHHHHHHhCccccCCEEEcCCCCcccCHHHHH
Confidence 9999999998654321 12222 23333332 35699999999999999877777899999974 35999999
Q ss_pred HHHHHhhhhc
Q 021928 294 KCFSRLMEKT 303 (305)
Q Consensus 294 ~~~~~l~~~~ 303 (305)
+++.++++++
T Consensus 290 ~~l~~~lG~~ 299 (390)
T PLN02657 290 EMLFRILGKE 299 (390)
T ss_pred HHHHHHhCCC
Confidence 9999999875
|
|
| >KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=99.91 E-value=9.4e-23 Score=185.81 Aligned_cols=203 Identities=16% Similarity=0.174 Sum_probs=144.9
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchh-----hhhc---CCCcEEeecCCCCHHHHHHHhcCccEEEE
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-----MESF---GTYVESMAGDASNKKFLKTALRGVRSIIC 168 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~-----~~~~---~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~ 168 (305)
.+++|+||||+||||++|+++|+++||+|++.+|++++. ...+ +.+.+.+.+|+.|.+++.++++|||.|||
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~gcdgVfH 84 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAIDGCDGVFH 84 (327)
T ss_pred CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHHhCCCEEEE
Confidence 569999999999999999999999999999999998762 1112 34689999999999999999999999999
Q ss_pred CCcc----------h-----------HhhhhhhcC-CCEEEEEcccccccCCCCcc---------cccc----------h
Q 021928 169 PSEG----------F-----------ISNAGSLKG-VQHVILLSQLSVYRGSGGIQ---------ALMK----------G 207 (305)
Q Consensus 169 ~~~g----------~-----------~~~~a~~~g-v~~~V~iSS~~~~~~~~~~~---------~~~~----------~ 207 (305)
++.. . +.++|++.. |+|||++||..+........ .+.+ |
T Consensus 85 ~Asp~~~~~~~~e~~li~pav~Gt~nVL~ac~~~~sVkrvV~TSS~aAv~~~~~~~~~~~vvdE~~wsd~~~~~~~~~~Y 164 (327)
T KOG1502|consen 85 TASPVDFDLEDPEKELIDPAVKGTKNVLEACKKTKSVKRVVYTSSTAAVRYNGPNIGENSVVDEESWSDLDFCRCKKLWY 164 (327)
T ss_pred eCccCCCCCCCcHHhhhhHHHHHHHHHHHHHhccCCcceEEEeccHHHhccCCcCCCCCcccccccCCcHHHHHhhHHHH
Confidence 8321 1 445677766 99999999998765321110 0100 0
Q ss_pred -HHHHHH-HHHHHHHHhCCCCEEEEecCCcccCCCCC-------------cceeeecCCCCCCccCHHHHHHHHHHHhhC
Q 021928 208 -NARKLA-EQDESMLMASGIPYTIIRTGVLQNTPGGK-------------QGFQFEEGCAANGSLSKEDAAFICVEALES 272 (305)
Q Consensus 208 -~~~~~~-~~aE~~l~~~gi~~tilRPg~l~~~~~~~-------------~~~~~~~~~~~~~~Is~~DvA~~iv~~l~~ 272 (305)
..+..+ +++.++..+.+++.+.+.|+.+.+..-.. ++..-........+|+++|||.+.+.++++
T Consensus 165 ~~sK~lAEkaAw~fa~e~~~~lv~inP~lV~GP~l~~~l~~s~~~~l~~i~G~~~~~~n~~~~~VdVrDVA~AHv~a~E~ 244 (327)
T KOG1502|consen 165 ALSKTLAEKAAWEFAKENGLDLVTINPGLVFGPGLQPSLNSSLNALLKLIKGLAETYPNFWLAFVDVRDVALAHVLALEK 244 (327)
T ss_pred HHHHHHHHHHHHHHHHhCCccEEEecCCceECCCcccccchhHHHHHHHHhcccccCCCCceeeEeHHHHHHHHHHHHcC
Confidence 112222 23345556789999999999865432110 111111223335589999999999999999
Q ss_pred CCCCCcEEEEecCCcCHHHHHHHHHHhh
Q 021928 273 IPQTGLIFEVVNGEEKVSDWKKCFSRLM 300 (305)
Q Consensus 273 ~~~~~~~~~v~~g~~s~~d~~~~~~~l~ 300 (305)
|.+.| .|.+.+....++|+++.+.+..
T Consensus 245 ~~a~G-Ryic~~~~~~~~ei~~~l~~~~ 271 (327)
T KOG1502|consen 245 PSAKG-RYICVGEVVSIKEIADILRELF 271 (327)
T ss_pred cccCc-eEEEecCcccHHHHHHHHHHhC
Confidence 98875 5666666667889888887653
|
|
| >PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.6e-22 Score=188.26 Aligned_cols=205 Identities=11% Similarity=0.000 Sum_probs=148.2
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh----h-------cCCCcEEeecCCCCHHHHHHHhcCc
Q 021928 95 PEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME----S-------FGTYVESMAGDASNKKFLKTALRGV 163 (305)
Q Consensus 95 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~----~-------~~~~v~~v~~D~~d~~~~~~~~~~~ 163 (305)
...+|+|+||||+||||++|+++|+++|++|++++|....... . ...++.++.+|+.|.+.+.++++++
T Consensus 12 ~~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~~~ 91 (348)
T PRK15181 12 VLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACKNV 91 (348)
T ss_pred cccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhhCC
Confidence 3456899999999999999999999999999999986432110 0 0135788999999999999999999
Q ss_pred cEEEECCcc----------------------hHhhhhhhcCCCEEEEEcccccccCCCC--------cccccchHHHHHH
Q 021928 164 RSIICPSEG----------------------FISNAGSLKGVQHVILLSQLSVYRGSGG--------IQALMKGNARKLA 213 (305)
Q Consensus 164 d~Vi~~~~g----------------------~~~~~a~~~gv~~~V~iSS~~~~~~~~~--------~~~~~~~~~~~~~ 213 (305)
|+|||+++. .+.+++++.++++|||+||..+|..... ..+...|.. .|
T Consensus 92 d~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~p~~~Y~~--sK 169 (348)
T PRK15181 92 DYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAV--TK 169 (348)
T ss_pred CEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeechHhhCCCCCCCCCCCCCCCCCChhhH--HH
Confidence 999998320 1456678889999999999988863211 011122222 23
Q ss_pred HHHHHHH----HhCCCCEEEEecCCcccCC---C---------------CCccee-eecCCCCCCccCHHHHHHHHHHHh
Q 021928 214 EQDESML----MASGIPYTIIRTGVLQNTP---G---------------GKQGFQ-FEEGCAANGSLSKEDAAFICVEAL 270 (305)
Q Consensus 214 ~~aE~~l----~~~gi~~tilRPg~l~~~~---~---------------~~~~~~-~~~~~~~~~~Is~~DvA~~iv~~l 270 (305)
..+|.++ .+.+++++++||+.+.+.. . .++.+. ++.+....++++++|+|++++.++
T Consensus 170 ~~~e~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~~~i~~~g~g~~~rd~i~v~D~a~a~~~~~ 249 (348)
T PRK15181 170 YVNELYADVFARSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLLSA 249 (348)
T ss_pred HHHHHHHHHHHHHhCCCEEEEEecceeCcCCCCCCccccCHHHHHHHHHcCCCcEEeCCCCceEeeEEHHHHHHHHHHHH
Confidence 3445443 3468999999999865421 1 111222 234555678999999999999877
Q ss_pred hCCC--CCCcEEEEecCC-cCHHHHHHHHHHhhh
Q 021928 271 ESIP--QTGLIFEVVNGE-EKVSDWKKCFSRLME 301 (305)
Q Consensus 271 ~~~~--~~~~~~~v~~g~-~s~~d~~~~~~~l~~ 301 (305)
..+. ..+.+|||++++ .+++|+++.+.++++
T Consensus 250 ~~~~~~~~~~~yni~~g~~~s~~e~~~~i~~~~~ 283 (348)
T PRK15181 250 TTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLN 283 (348)
T ss_pred hcccccCCCCEEEecCCCcEeHHHHHHHHHHHhC
Confidence 6432 357899999876 599999999998875
|
|
| >PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=5.5e-22 Score=193.61 Aligned_cols=205 Identities=19% Similarity=0.244 Sum_probs=149.2
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhc---------------CCCcEEeecCCCCHHHHHHHhc
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF---------------GTYVESMAGDASNKKFLKTALR 161 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~---------------~~~v~~v~~D~~d~~~~~~~~~ 161 (305)
.+++|+||||+|+||++++++|+++|++|++++|+.++..... ..+++++.+|+.|.+++.+++.
T Consensus 79 ~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~aLg 158 (576)
T PLN03209 79 DEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGPALG 158 (576)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHHHhc
Confidence 4589999999999999999999999999999999987643211 1247899999999999999999
Q ss_pred CccEEEECCcc--------------------hHhhhhhhcCCCEEEEEcccccccCCCCccccc-chHHHHHHHHHHHHH
Q 021928 162 GVRSIICPSEG--------------------FISNAGSLKGVQHVILLSQLSVYRGSGGIQALM-KGNARKLAEQDESML 220 (305)
Q Consensus 162 ~~d~Vi~~~~g--------------------~~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~-~~~~~~~~~~aE~~l 220 (305)
++|+|||+++. .+.++++..+++|||++||.++.........+. ......+++.+|++|
T Consensus 159 giDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~agVgRIV~VSSiga~~~g~p~~~~~sk~~~~~~KraaE~~L 238 (576)
T PLN03209 159 NASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAKVNHFILVTSLGTNKVGFPAAILNLFWGVLCWKRKAEEAL 238 (576)
T ss_pred CCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHhCCCEEEEEccchhcccCccccchhhHHHHHHHHHHHHHHH
Confidence 99999988431 034556678899999999997642111111111 122445677889999
Q ss_pred HhCCCCEEEEecCCcccCCC---CCcceeeecCC-CCCCccCHHHHHHHHHHHhhCCC-CCCcEEEEecCCc-CHHHHHH
Q 021928 221 MASGIPYTIIRTGVLQNTPG---GKQGFQFEEGC-AANGSLSKEDAAFICVEALESIP-QTGLIFEVVNGEE-KVSDWKK 294 (305)
Q Consensus 221 ~~~gi~~tilRPg~l~~~~~---~~~~~~~~~~~-~~~~~Is~~DvA~~iv~~l~~~~-~~~~~~~v~~g~~-s~~d~~~ 294 (305)
+++|++|++||||++..... ....+.....+ .....++++|||++++.++.++. ..+++|++.+++. ...++.+
T Consensus 239 ~~sGIrvTIVRPG~L~tp~d~~~~t~~v~~~~~d~~~gr~isreDVA~vVvfLasd~~as~~kvvevi~~~~~p~~~~~~ 318 (576)
T PLN03209 239 IASGLPYTIVRPGGMERPTDAYKETHNLTLSEEDTLFGGQVSNLQVAELMACMAKNRRLSYCKVVEVIAETTAPLTPMEE 318 (576)
T ss_pred HHcCCCEEEEECCeecCCccccccccceeeccccccCCCccCHHHHHHHHHHHHcCchhccceEEEEEeCCCCCCCCHHH
Confidence 99999999999999753211 11122221222 23467999999999999998765 6789999998763 4566777
Q ss_pred HHHHhhh
Q 021928 295 CFSRLME 301 (305)
Q Consensus 295 ~~~~l~~ 301 (305)
+|.++-.
T Consensus 319 ~~~~ip~ 325 (576)
T PLN03209 319 LLAKIPS 325 (576)
T ss_pred HHHhccc
Confidence 7766543
|
|
| >PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.6e-22 Score=182.04 Aligned_cols=203 Identities=18% Similarity=0.214 Sum_probs=146.1
Q ss_pred EEEcCCChHHHHHHHHHHhCC--CeEEEEEcCcchhh--hhcCCC-cEEeecCCCCHHHHHHHhcCccEEEECCc-----
Q 021928 102 LVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRNAM--ESFGTY-VESMAGDASNKKFLKTALRGVRSIICPSE----- 171 (305)
Q Consensus 102 lVtGatG~iG~~l~~~L~~~g--~~V~~~~R~~~~~~--~~~~~~-v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~----- 171 (305)
|||||+||||++|+++|+++| ++|+++++.+.... ...... .+++.+|++|.+++.++++++|+|||++.
T Consensus 1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~a~~g~d~V~H~Aa~~~~~ 80 (280)
T PF01073_consen 1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFLKDLQKSGVKEYIQGDITDPESLEEALEGVDVVFHTAAPVPPW 80 (280)
T ss_pred CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccccchhhhcccceeEEEeccccHHHHHHHhcCCceEEEeCcccccc
Confidence 699999999999999999999 79999998775432 111222 34999999999999999999999999822
Q ss_pred c----------------hHhhhhhhcCCCEEEEEcccccccC---CCCc------cccc---chHHHHHHHHHHHHHHh-
Q 021928 172 G----------------FISNAGSLKGVQHVILLSQLSVYRG---SGGI------QALM---KGNARKLAEQDESMLMA- 222 (305)
Q Consensus 172 g----------------~~~~~a~~~gv~~~V~iSS~~~~~~---~~~~------~~~~---~~~~~~~~~~aE~~l~~- 222 (305)
+ .+.++|++.+|++|||+||.+++.+ .... .++. ...+..-|..+|+++.+
T Consensus 81 ~~~~~~~~~~vNV~GT~nvl~aa~~~~VkrlVytSS~~vv~~~~~~~~~~~~dE~~~~~~~~~~~Y~~SK~~AE~~V~~a 160 (280)
T PF01073_consen 81 GDYPPEEYYKVNVDGTRNVLEAARKAGVKRLVYTSSISVVFDNYKGDPIINGDEDTPYPSSPLDPYAESKALAEKAVLEA 160 (280)
T ss_pred CcccHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcCcceeEeccCCCCcccCCcCCcccccccCchHHHHHHHHHHHHhh
Confidence 1 1567888999999999999988654 1111 0111 01133345567877664
Q ss_pred C--------CCCEEEEecCCcccCCC------------CC-cceeeecCCCCCCccCHHHHHHHHHHHhh---CC----C
Q 021928 223 S--------GIPYTIIRTGVLQNTPG------------GK-QGFQFEEGCAANGSLSKEDAAFICVEALE---SI----P 274 (305)
Q Consensus 223 ~--------gi~~tilRPg~l~~~~~------------~~-~~~~~~~~~~~~~~Is~~DvA~~iv~~l~---~~----~ 274 (305)
. .+..++|||..+.+... .+ ....++.+....++++++|||++++.+++ ++ .
T Consensus 161 ~~~~~~~g~~l~t~~lRP~~IyGp~d~~~~~~~~~~~~~g~~~~~~g~~~~~~~~vyV~NvA~ahvlA~~~L~~~~~~~~ 240 (280)
T PF01073_consen 161 NGSELKNGGRLRTCALRPAGIYGPGDQRLVPRLVKMVRSGLFLFQIGDGNNLFDFVYVENVAHAHVLAAQALLEPGKPER 240 (280)
T ss_pred cccccccccceeEEEEeccEEeCcccccccchhhHHHHhcccceeecCCCceECcEeHHHHHHHHHHHHHHhcccccccc
Confidence 2 27899999988654321 11 12333444555789999999999987754 22 3
Q ss_pred CCCcEEEEecCCc-C-HHHHHHHHHHhhhhcC
Q 021928 275 QTGLIFEVVNGEE-K-VSDWKKCFSRLMEKTG 304 (305)
Q Consensus 275 ~~~~~~~v~~g~~-s-~~d~~~~~~~l~~~~~ 304 (305)
..|+.|.|++++. . +.|+...+.+.+|.+.
T Consensus 241 ~~G~~y~itd~~p~~~~~~f~~~~~~~~G~~~ 272 (280)
T PF01073_consen 241 VAGQAYFITDGEPVPSFWDFMRPLWEALGYPP 272 (280)
T ss_pred CCCcEEEEECCCccCcHHHHHHHHHHHCCCCC
Confidence 5789999999764 5 7899988888877653
|
3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process |
| >PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA | Back alignment and domain information |
|---|
Probab=99.90 E-value=7.1e-23 Score=181.32 Aligned_cols=201 Identities=22% Similarity=0.263 Sum_probs=146.4
Q ss_pred EEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcch--hhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEECCc----c--
Q 021928 101 VLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN--AMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE----G-- 172 (305)
Q Consensus 101 vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~--~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~----g-- 172 (305)
|+|+||||.+|+++++.|++.+++|++++|++.+ ..+.-..+++++.+|+.|.+++.++|+|+|+||++.+ .
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~~~~~l~~~g~~vv~~d~~~~~~l~~al~g~d~v~~~~~~~~~~~~ 80 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSSDRAQQLQALGAEVVEADYDDPESLVAALKGVDAVFSVTPPSHPSEL 80 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHHHHHHHHHHTTTEEEES-TT-HHHHHHHHTTCSEEEEESSCSCCCHH
T ss_pred CEEECCccHHHHHHHHHHHhCCCCcEEEEeccchhhhhhhhcccceEeecccCCHHHHHHHHcCCceEEeecCcchhhhh
Confidence 7999999999999999999999999999999854 2222234689999999999999999999999998733 1
Q ss_pred ----hHhhhhhhcCCCEEEEEcccccccCCCCcccccchHHHHHHHHHHHHHHhCCCCEEEEecCCcccCC---------
Q 021928 173 ----FISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMASGIPYTIIRTGVLQNTP--------- 239 (305)
Q Consensus 173 ----~~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~~~~~~aE~~l~~~gi~~tilRPg~l~~~~--------- 239 (305)
.+.++++++||+|||+.|-...+.......+. ......+...|+++++.+++||+||||.++++.
T Consensus 81 ~~~~~li~Aa~~agVk~~v~ss~~~~~~~~~~~~p~--~~~~~~k~~ie~~l~~~~i~~t~i~~g~f~e~~~~~~~~~~~ 158 (233)
T PF05368_consen 81 EQQKNLIDAAKAAGVKHFVPSSFGADYDESSGSEPE--IPHFDQKAEIEEYLRESGIPYTIIRPGFFMENLLPPFAPVVD 158 (233)
T ss_dssp HHHHHHHHHHHHHT-SEEEESEESSGTTTTTTSTTH--HHHHHHHHHHHHHHHHCTSEBEEEEE-EEHHHHHTTTHHTTC
T ss_pred hhhhhHHHhhhccccceEEEEEeccccccccccccc--chhhhhhhhhhhhhhhccccceeccccchhhhhhhhhccccc
Confidence 27788999999999975544444222111111 112223557799999999999999999966431
Q ss_pred -CCCc-ceee-ecCCCCCCc-cCHHHHHHHHHHHhhCCCCC--CcEEEEecCCcCHHHHHHHHHHhhhhc
Q 021928 240 -GGKQ-GFQF-EEGCAANGS-LSKEDAAFICVEALESIPQT--GLIFEVVNGEEKVSDWKKCFSRLMEKT 303 (305)
Q Consensus 240 -~~~~-~~~~-~~~~~~~~~-Is~~DvA~~iv~~l~~~~~~--~~~~~v~~g~~s~~d~~~~~~~l~~~~ 303 (305)
.... .+.+ ..++....+ ++.+|+|++++.++.+|... ++.+.+.+...+.+|+++++++++|++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~Dvg~~va~il~~p~~~~~~~~~~~~~~~~t~~eia~~~s~~~G~~ 228 (233)
T PF05368_consen 159 IKKSKDVVTLPGPGNQKAVPVTDTRDVGRAVAAILLDPEKHNNGKTIFLAGETLTYNEIAAILSKVLGKK 228 (233)
T ss_dssp SCCTSSEEEEETTSTSEEEEEEHHHHHHHHHHHHHHSGGGTTEEEEEEEGGGEEEHHHHHHHHHHHHTSE
T ss_pred ccccceEEEEccCCCccccccccHHHHHHHHHHHHcChHHhcCCEEEEeCCCCCCHHHHHHHHHHHHCCc
Confidence 1111 1223 233433455 59999999999999997754 677887765569999999999999875
|
NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B .... |
| >PLN00016 RNA-binding protein; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.7e-22 Score=191.67 Aligned_cols=208 Identities=15% Similarity=0.161 Sum_probs=152.5
Q ss_pred cCCCCEEEEE----cCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh-----------hcCCCcEEeecCCCCHHHHHHH
Q 021928 95 PEARDAVLVT----DGDSDIGQMVILSLIVKRTRIKALVKDKRNAME-----------SFGTYVESMAGDASNKKFLKTA 159 (305)
Q Consensus 95 ~~~~~~vlVt----GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~-----------~~~~~v~~v~~D~~d~~~~~~~ 159 (305)
..++++|||| ||||+||++++++|+++||+|++++|+...... ....+++++.+|+.|.+.+. .
T Consensus 49 ~~~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~~~-~ 127 (378)
T PLN00016 49 AVEKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVWGDPADVKSKV-A 127 (378)
T ss_pred ccccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhhhcCceEEEecHHHHHhhh-c
Confidence 3456899999 999999999999999999999999998754211 11235899999997733322 2
Q ss_pred hcCccEEEECCc------chHhhhhhhcCCCEEEEEcccccccCCCCccccc--chHHHHHHHHHHHHHHhCCCCEEEEe
Q 021928 160 LRGVRSIICPSE------GFISNAGSLKGVQHVILLSQLSVYRGSGGIQALM--KGNARKLAEQDESMLMASGIPYTIIR 231 (305)
Q Consensus 160 ~~~~d~Vi~~~~------g~~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~--~~~~~~~~~~aE~~l~~~gi~~tilR 231 (305)
..++|+||++++ ..+.+++++.|+++||++||.++|.......... .......+..+|.++++.+++|+++|
T Consensus 128 ~~~~d~Vi~~~~~~~~~~~~ll~aa~~~gvkr~V~~SS~~vyg~~~~~p~~E~~~~~p~~sK~~~E~~l~~~~l~~~ilR 207 (378)
T PLN00016 128 GAGFDVVYDNNGKDLDEVEPVADWAKSPGLKQFLFCSSAGVYKKSDEPPHVEGDAVKPKAGHLEVEAYLQKLGVNWTSFR 207 (378)
T ss_pred cCCccEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEEccHhhcCCCCCCCCCCCCcCCCcchHHHHHHHHHHcCCCeEEEe
Confidence 357899998843 2367788889999999999999886432211000 00001135678899999999999999
Q ss_pred cCCcccCCC-------------CCcceee-ecCCCCCCccCHHHHHHHHHHHhhCCCCCCcEEEEecCC-cCHHHHHHHH
Q 021928 232 TGVLQNTPG-------------GKQGFQF-EEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVVNGE-EKVSDWKKCF 296 (305)
Q Consensus 232 Pg~l~~~~~-------------~~~~~~~-~~~~~~~~~Is~~DvA~~iv~~l~~~~~~~~~~~v~~g~-~s~~d~~~~~ 296 (305)
|+.+++... .++.+.+ +.+....++++++|+|++++.++.++...+++|++++++ .++.|+++.+
T Consensus 208 p~~vyG~~~~~~~~~~~~~~~~~~~~i~~~g~g~~~~~~i~v~Dva~ai~~~l~~~~~~~~~yni~~~~~~s~~el~~~i 287 (378)
T PLN00016 208 PQYIYGPGNNKDCEEWFFDRLVRGRPVPIPGSGIQLTQLGHVKDLASMFALVVGNPKAAGQIFNIVSDRAVTFDGMAKAC 287 (378)
T ss_pred ceeEECCCCCCchHHHHHHHHHcCCceeecCCCCeeeceecHHHHHHHHHHHhcCccccCCEEEecCCCccCHHHHHHHH
Confidence 998664321 1112222 234445678999999999999998876677999999875 6999999999
Q ss_pred HHhhhhc
Q 021928 297 SRLMEKT 303 (305)
Q Consensus 297 ~~l~~~~ 303 (305)
.+..+++
T Consensus 288 ~~~~g~~ 294 (378)
T PLN00016 288 AKAAGFP 294 (378)
T ss_pred HHHhCCC
Confidence 9998865
|
|
| >COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.5e-22 Score=178.22 Aligned_cols=203 Identities=18% Similarity=0.199 Sum_probs=147.9
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCC-cEEeecCCCCHHHHHHHhc--CccEEEECCcc---
Q 021928 99 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTY-VESMAGDASNKKFLKTALR--GVRSIICPSEG--- 172 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~-v~~v~~D~~d~~~~~~~~~--~~d~Vi~~~~g--- 172 (305)
|+||||||+|+||+|.|.+|++.|++|++++.-.....+..... ++++++|+.|.+.+.+.|+ .+|+|||.++-
T Consensus 1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~~~~f~~gDi~D~~~L~~vf~~~~idaViHFAa~~~V 80 (329)
T COG1087 1 MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKLQFKFYEGDLLDRALLTAVFEENKIDAVVHFAASISV 80 (329)
T ss_pred CeEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhhccCceEEeccccHHHHHHHHHhcCCCEEEECcccccc
Confidence 68999999999999999999999999999876543322223222 6999999999999999997 47999987431
Q ss_pred -------------------hHhhhhhhcCCCEEEEEcccccccCCCC--------cccccchHHHHHHHHHHHHHH----
Q 021928 173 -------------------FISNAGSLKGVQHVILLSQLSVYRGSGG--------IQALMKGNARKLAEQDESMLM---- 221 (305)
Q Consensus 173 -------------------~~~~~a~~~gv~~~V~iSS~~~~~~~~~--------~~~~~~~~~~~~~~~aE~~l~---- 221 (305)
.+.+++++.+|++|||.||..+|+.+.. ..+..+|.. -|...|++|+
T Consensus 81 gESv~~Pl~Yy~NNv~gTl~Ll~am~~~gv~~~vFSStAavYG~p~~~PI~E~~~~~p~NPYG~--sKlm~E~iL~d~~~ 158 (329)
T COG1087 81 GESVQNPLKYYDNNVVGTLNLIEAMLQTGVKKFIFSSTAAVYGEPTTSPISETSPLAPINPYGR--SKLMSEEILRDAAK 158 (329)
T ss_pred chhhhCHHHHHhhchHhHHHHHHHHHHhCCCEEEEecchhhcCCCCCcccCCCCCCCCCCcchh--HHHHHHHHHHHHHH
Confidence 1678899999999999999999974322 122333333 2445677765
Q ss_pred hCCCCEEEEe--------cC-CcccCCC-------------CCc---ceeee------cCCCCCCccCHHHHHHHHHHHh
Q 021928 222 ASGIPYTIIR--------TG-VLQNTPG-------------GKQ---GFQFE------EGCAANGSLSKEDAAFICVEAL 270 (305)
Q Consensus 222 ~~gi~~tilR--------Pg-~l~~~~~-------------~~~---~~~~~------~~~~~~~~Is~~DvA~~iv~~l 270 (305)
..++++++|| |. .+.+.+. .++ -.+++ .|...+..||+.|+|++.+.++
T Consensus 159 a~~~~~v~LRYFN~aGA~~~G~iGe~~~~~thLip~~~q~A~G~r~~l~ifG~DY~T~DGT~iRDYIHV~DLA~aH~~Al 238 (329)
T COG1087 159 ANPFKVVILRYFNVAGACPDGTLGQRYPGATLLIPVAAEAALGKRDKLFIFGDDYDTKDGTCIRDYIHVDDLADAHVLAL 238 (329)
T ss_pred hCCCcEEEEEecccccCCCCCccCCCCCCcchHHHHHHHHHhcCCceeEEeCCCCCCCCCCeeeeeeehhHHHHHHHHHH
Confidence 3789999999 22 2222221 111 11221 2334478999999999999998
Q ss_pred hCCC--CCCcEEEEecCC-cCHHHHHHHHHHhhhhc
Q 021928 271 ESIP--QTGLIFEVVNGE-EKVSDWKKCFSRLMEKT 303 (305)
Q Consensus 271 ~~~~--~~~~~~~v~~g~-~s~~d~~~~~~~l~~~~ 303 (305)
+.-. -...+||+.+|. .|+.|+++.+.++++++
T Consensus 239 ~~L~~~g~~~~~NLG~G~G~SV~evi~a~~~vtg~~ 274 (329)
T COG1087 239 KYLKEGGSNNIFNLGSGNGFSVLEVIEAAKKVTGRD 274 (329)
T ss_pred HHHHhCCceeEEEccCCCceeHHHHHHHHHHHhCCc
Confidence 7433 223699999987 48999999999999875
|
|
| >PLN02695 GDP-D-mannose-3',5'-epimerase | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.4e-21 Score=185.01 Aligned_cols=206 Identities=14% Similarity=0.053 Sum_probs=148.4
Q ss_pred cCcCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEECCcc
Q 021928 93 EFPEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG 172 (305)
Q Consensus 93 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~g 172 (305)
++...+|+||||||+||||++++++|+++||+|++++|............++++.+|+.|.+.+.++++++|+|||+++.
T Consensus 16 ~~~~~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih~Aa~ 95 (370)
T PLN02695 16 YWPSEKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEHMSEDMFCHEFHLVDLRVMENCLKVTKGVDHVFNLAAD 95 (370)
T ss_pred CCCCCCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEeccccccccccccceEEECCCCCHHHHHHHHhCCCEEEEcccc
Confidence 44556799999999999999999999999999999998653221111113678899999999999999999999988320
Q ss_pred -----------------------hHhhhhhhcCCCEEEEEcccccccCCCC--------------cccccchHHHHHHHH
Q 021928 173 -----------------------FISNAGSLKGVQHVILLSQLSVYRGSGG--------------IQALMKGNARKLAEQ 215 (305)
Q Consensus 173 -----------------------~~~~~a~~~gv~~~V~iSS~~~~~~~~~--------------~~~~~~~~~~~~~~~ 215 (305)
.+.+++++.++++||++||..+|..... ..+... ....|..
T Consensus 96 ~~~~~~~~~~~~~~~~~N~~~t~nll~aa~~~~vk~~V~~SS~~vYg~~~~~~~~~~~~E~~~~p~~p~s~--Yg~sK~~ 173 (370)
T PLN02695 96 MGGMGFIQSNHSVIMYNNTMISFNMLEAARINGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDA--YGLEKLA 173 (370)
T ss_pred cCCccccccCchhhHHHHHHHHHHHHHHHHHhCCCEEEEeCchhhcCCccccCcCCCcCcccCCCCCCCCH--HHHHHHH
Confidence 1445677889999999999988763211 111112 2223445
Q ss_pred HHHHH----HhCCCCEEEEecCCcccCCCC-------------------Cccee-eecCCCCCCccCHHHHHHHHHHHhh
Q 021928 216 DESML----MASGIPYTIIRTGVLQNTPGG-------------------KQGFQ-FEEGCAANGSLSKEDAAFICVEALE 271 (305)
Q Consensus 216 aE~~l----~~~gi~~tilRPg~l~~~~~~-------------------~~~~~-~~~~~~~~~~Is~~DvA~~iv~~l~ 271 (305)
+|+++ ...+++++++||+.+++.... ...+. ++.++...++|+++|++++++.++.
T Consensus 174 ~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~g~~~r~~i~v~D~a~ai~~~~~ 253 (370)
T PLN02695 174 TEELCKHYTKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDEFEMWGDGKQTRSFTFIDECVEGVLRLTK 253 (370)
T ss_pred HHHHHHHHHHHhCCCEEEEEECCccCCCCCccccccccHHHHHHHHHcCCCCeEEeCCCCeEEeEEeHHHHHHHHHHHHh
Confidence 55544 347999999999986543210 11111 2344556789999999999999887
Q ss_pred CCCCCCcEEEEecCC-cCHHHHHHHHHHhhhh
Q 021928 272 SIPQTGLIFEVVNGE-EKVSDWKKCFSRLMEK 302 (305)
Q Consensus 272 ~~~~~~~~~~v~~g~-~s~~d~~~~~~~l~~~ 302 (305)
.+ .+++||+++++ .++.++.+.+.+..+.
T Consensus 254 ~~--~~~~~nv~~~~~~s~~el~~~i~~~~g~ 283 (370)
T PLN02695 254 SD--FREPVNIGSDEMVSMNEMAEIALSFENK 283 (370)
T ss_pred cc--CCCceEecCCCceeHHHHHHHHHHHhCC
Confidence 64 35789999876 4899999999887764
|
|
| >PLN02214 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.88 E-value=4e-21 Score=179.89 Aligned_cols=202 Identities=15% Similarity=0.175 Sum_probs=144.7
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhh----hhc---CCCcEEeecCCCCHHHHHHHhcCccEEEEC
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM----ESF---GTYVESMAGDASNKKFLKTALRGVRSIICP 169 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~----~~~---~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~ 169 (305)
++|+|+||||+||||++++++|+++|++|++++|+.+... ... ..+++++.+|+.|.+++.++++++|+|||+
T Consensus 9 ~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~ 88 (342)
T PLN02214 9 AGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDYEALKAAIDGCDGVFHT 88 (342)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCChHHHHHHHhcCCEEEEe
Confidence 4689999999999999999999999999999999865421 111 135788999999999999999999999998
Q ss_pred Ccc-----------------hHhhhhhhcCCCEEEEEcccc-cccCCCC-----cc------------cccchHHHHHHH
Q 021928 170 SEG-----------------FISNAGSLKGVQHVILLSQLS-VYRGSGG-----IQ------------ALMKGNARKLAE 214 (305)
Q Consensus 170 ~~g-----------------~~~~~a~~~gv~~~V~iSS~~-~~~~~~~-----~~------------~~~~~~~~~~~~ 214 (305)
++. .+.+++++.++++||++||.. +|..... .. +...| ...|.
T Consensus 89 A~~~~~~~~~~~~~nv~gt~~ll~aa~~~~v~r~V~~SS~~avyg~~~~~~~~~~~E~~~~~~~~~~~p~~~Y--~~sK~ 166 (342)
T PLN02214 89 ASPVTDDPEQMVEPAVNGAKFVINAAAEAKVKRVVITSSIGAVYMDPNRDPEAVVDESCWSDLDFCKNTKNWY--CYGKM 166 (342)
T ss_pred cCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeccceeeeccCCCCCCcccCcccCCChhhccccccHH--HHHHH
Confidence 431 145567788999999999964 5532110 00 01112 22344
Q ss_pred HHHHHHH----hCCCCEEEEecCCcccCCCCCc-------------ceeeecCCCCCCccCHHHHHHHHHHHhhCCCCCC
Q 021928 215 QDESMLM----ASGIPYTIIRTGVLQNTPGGKQ-------------GFQFEEGCAANGSLSKEDAAFICVEALESIPQTG 277 (305)
Q Consensus 215 ~aE~~l~----~~gi~~tilRPg~l~~~~~~~~-------------~~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~~~~ 277 (305)
.+|.+++ +.+++++++||+.+++...... +.....++....+|+++|+|++++.+++++.. +
T Consensus 167 ~aE~~~~~~~~~~g~~~v~lRp~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~V~Dva~a~~~al~~~~~-~ 245 (342)
T PLN02214 167 VAEQAAWETAKEKGVDLVVLNPVLVLGPPLQPTINASLYHVLKYLTGSAKTYANLTQAYVDVRDVALAHVLVYEAPSA-S 245 (342)
T ss_pred HHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCcccCCCCCcCeeEHHHHHHHHHHHHhCccc-C
Confidence 4555543 4699999999999654321100 00001223346899999999999999987654 4
Q ss_pred cEEEEecCCcCHHHHHHHHHHhhh
Q 021928 278 LIFEVVNGEEKVSDWKKCFSRLME 301 (305)
Q Consensus 278 ~~~~v~~g~~s~~d~~~~~~~l~~ 301 (305)
..|+++++..+++++++.+.+...
T Consensus 246 g~yn~~~~~~~~~el~~~i~~~~~ 269 (342)
T PLN02214 246 GRYLLAESARHRGEVVEILAKLFP 269 (342)
T ss_pred CcEEEecCCCCHHHHHHHHHHHCC
Confidence 589998877789999999998874
|
|
| >PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=4.6e-21 Score=179.55 Aligned_cols=202 Identities=13% Similarity=0.157 Sum_probs=145.0
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhC-CCeEEEEEcCcchhhhhcC-CCcEEeecCCC-CHHHHHHHhcCccEEEECCc---
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVK-RTRIKALVKDKRNAMESFG-TYVESMAGDAS-NKKFLKTALRGVRSIICPSE--- 171 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~R~~~~~~~~~~-~~v~~v~~D~~-d~~~~~~~~~~~d~Vi~~~~--- 171 (305)
+|+||||||+||||++|+++|+++ |++|++++|+..+.....+ ..++++.+|+. +.+.+.++++++|+|||+++
T Consensus 1 m~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~d~ViH~aa~~~ 80 (347)
T PRK11908 1 MKKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLGDLVNHPRMHFFEGDITINKEWIEYHVKKCDVILPLVAIAT 80 (347)
T ss_pred CcEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHhccCCCeEEEeCCCCCCHHHHHHHHcCCCEEEECcccCC
Confidence 478999999999999999999986 6999999987654333333 36899999998 77788889999999998722
Q ss_pred -c------------------hHhhhhhhcCCCEEEEEcccccccCCCC--c-------------ccccchHHHHHHHHHH
Q 021928 172 -G------------------FISNAGSLKGVQHVILLSQLSVYRGSGG--I-------------QALMKGNARKLAEQDE 217 (305)
Q Consensus 172 -g------------------~~~~~a~~~gv~~~V~iSS~~~~~~~~~--~-------------~~~~~~~~~~~~~~aE 217 (305)
. .+.+++++.+ ++||++||..+|..... . .+...|. ..|..+|
T Consensus 81 ~~~~~~~p~~~~~~n~~~~~~ll~aa~~~~-~~~v~~SS~~vyg~~~~~~~~ee~~~~~~~~~~~p~~~Y~--~sK~~~e 157 (347)
T PRK11908 81 PATYVKQPLRVFELDFEANLPIVRSAVKYG-KHLVFPSTSEVYGMCPDEEFDPEASPLVYGPINKPRWIYA--CSKQLMD 157 (347)
T ss_pred hHHhhcCcHHHHHHHHHHHHHHHHHHHhcC-CeEEEEecceeeccCCCcCcCccccccccCcCCCccchHH--HHHHHHH
Confidence 1 1345566677 79999999988863211 0 0011122 2344456
Q ss_pred HHHH----hCCCCEEEEecCCcccCCC----------------------CCcceee-ecCCCCCCccCHHHHHHHHHHHh
Q 021928 218 SMLM----ASGIPYTIIRTGVLQNTPG----------------------GKQGFQF-EEGCAANGSLSKEDAAFICVEAL 270 (305)
Q Consensus 218 ~~l~----~~gi~~tilRPg~l~~~~~----------------------~~~~~~~-~~~~~~~~~Is~~DvA~~iv~~l 270 (305)
++++ +.+++++++||+.+.+... .++.+.+ +.+.....+|+++|+|++++.++
T Consensus 158 ~~~~~~~~~~~~~~~ilR~~~v~Gp~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~g~~~r~~i~v~D~a~a~~~~~ 237 (347)
T PRK11908 158 RVIWAYGMEEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGEPISLVDGGSQKRAFTDIDDGIDALMKII 237 (347)
T ss_pred HHHHHHHHHcCCCeEEEeeeeeeCCCccCCCccccCCcchHHHHHHHHhCCCceEEecCCceeeccccHHHHHHHHHHHH
Confidence 5554 4799999999987543210 1111222 23455678999999999999999
Q ss_pred hCCC--CCCcEEEEecC--CcCHHHHHHHHHHhhhh
Q 021928 271 ESIP--QTGLIFEVVNG--EEKVSDWKKCFSRLMEK 302 (305)
Q Consensus 271 ~~~~--~~~~~~~v~~g--~~s~~d~~~~~~~l~~~ 302 (305)
+++. ..+++||++++ ..+++|+++.+.+.++.
T Consensus 238 ~~~~~~~~g~~yni~~~~~~~s~~e~~~~i~~~~~~ 273 (347)
T PRK11908 238 ENKDGVASGKIYNIGNPKNNHSVRELANKMLELAAE 273 (347)
T ss_pred hCccccCCCCeEEeCCCCCCcCHHHHHHHHHHHhcC
Confidence 8764 45789999985 36999999999988774
|
|
| >PLN02986 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.88 E-value=4.4e-21 Score=177.68 Aligned_cols=202 Identities=16% Similarity=0.147 Sum_probs=140.6
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhh---hhc-----CCCcEEeecCCCCHHHHHHHhcCccEEEE
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM---ESF-----GTYVESMAGDASNKKFLKTALRGVRSIIC 168 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~---~~~-----~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~ 168 (305)
.+++|+||||+||||++++++|+++|++|++++|+..+.. ... ..+++++.+|++|.+++.++++++|+|||
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih 83 (322)
T PLN02986 4 GGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIEGCDAVFH 83 (322)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHhCCCEEEE
Confidence 4589999999999999999999999999999999875421 111 23689999999999999999999999998
Q ss_pred CCcch---------------------Hhhhhhhc-CCCEEEEEccccccc--CCC---C----------cc----cccch
Q 021928 169 PSEGF---------------------ISNAGSLK-GVQHVILLSQLSVYR--GSG---G----------IQ----ALMKG 207 (305)
Q Consensus 169 ~~~g~---------------------~~~~a~~~-gv~~~V~iSS~~~~~--~~~---~----------~~----~~~~~ 207 (305)
+++.. +.+++++. +++|||++||.+++. ... . +. ....|
T Consensus 84 ~A~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~rvV~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~~~Y 163 (322)
T PLN02986 84 TASPVFFTVKDPQTELIDPALKGTINVLNTCKETPSVKRVILTSSTAAVLFRQPPIEANDVVDETFFSDPSLCRETKNWY 163 (322)
T ss_pred eCCCcCCCCCCchhhhhHHHHHHHHHHHHHHHhcCCccEEEEecchhheecCCccCCCCCCcCcccCCChHHhhccccch
Confidence 84310 23345554 789999999987542 110 0 00 01112
Q ss_pred HHHHHHHHHHH----HHHhCCCCEEEEecCCcccCCCC-Ccc--------eeee---cCCCCCCccCHHHHHHHHHHHhh
Q 021928 208 NARKLAEQDES----MLMASGIPYTIIRTGVLQNTPGG-KQG--------FQFE---EGCAANGSLSKEDAAFICVEALE 271 (305)
Q Consensus 208 ~~~~~~~~aE~----~l~~~gi~~tilRPg~l~~~~~~-~~~--------~~~~---~~~~~~~~Is~~DvA~~iv~~l~ 271 (305)
.. .|..+|. +.++.+++++++||+.+.+.... ... +..+ .+.....+|+++|+|++++.+++
T Consensus 164 ~~--sK~~aE~~~~~~~~~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~Dva~a~~~al~ 241 (322)
T PLN02986 164 PL--SKILAENAAWEFAKDNGIDMVVLNPGFICGPLLQPTLNFSVELIVDFINGKNLFNNRFYRFVDVRDVALAHIKALE 241 (322)
T ss_pred HH--HHHHHHHHHHHHHHHhCCeEEEEcccceeCCCCCCCCCccHHHHHHHHcCCCCCCCcCcceeEHHHHHHHHHHHhc
Confidence 22 2333443 44557999999999996542110 000 0000 12233578999999999999998
Q ss_pred CCCCCCcEEEEecCCcCHHHHHHHHHHhhh
Q 021928 272 SIPQTGLIFEVVNGEEKVSDWKKCFSRLME 301 (305)
Q Consensus 272 ~~~~~~~~~~v~~g~~s~~d~~~~~~~l~~ 301 (305)
++...+ .|++++++.+++++++++.+...
T Consensus 242 ~~~~~~-~yni~~~~~s~~e~~~~i~~~~~ 270 (322)
T PLN02986 242 TPSANG-RYIIDGPIMSVNDIIDILRELFP 270 (322)
T ss_pred CcccCC-cEEEecCCCCHHHHHHHHHHHCC
Confidence 776544 89997666799999999988764
|
|
| >PLN02662 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.88 E-value=6.5e-21 Score=176.13 Aligned_cols=202 Identities=14% Similarity=0.143 Sum_probs=140.4
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhh---hh-----cCCCcEEeecCCCCHHHHHHHhcCccEEEE
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM---ES-----FGTYVESMAGDASNKKFLKTALRGVRSIIC 168 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~---~~-----~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~ 168 (305)
..++||||||+||||++++++|+++|++|++++|+..... .. ...+++++.+|+.|.+.+.++++++|+|||
T Consensus 3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 82 (322)
T PLN02662 3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVVDGCEGVFH 82 (322)
T ss_pred CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHHHHHcCCCEEEE
Confidence 4589999999999999999999999999999999865321 11 123688999999999999999999999998
Q ss_pred CCcc----------h-----------Hhhhhhhc-CCCEEEEEccccc--ccCCC---C--c------ccc------cch
Q 021928 169 PSEG----------F-----------ISNAGSLK-GVQHVILLSQLSV--YRGSG---G--I------QAL------MKG 207 (305)
Q Consensus 169 ~~~g----------~-----------~~~~a~~~-gv~~~V~iSS~~~--~~~~~---~--~------~~~------~~~ 207 (305)
+++. . +.+++.+. ++++||++||.++ |.... . . .+. ..|
T Consensus 83 ~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~v~~SS~~~~~y~~~~~~~~~~~~E~~~~~p~~~~~~~~~Y 162 (322)
T PLN02662 83 TASPFYHDVTDPQAELIDPAVKGTLNVLRSCAKVPSVKRVVVTSSMAAVAYNGKPLTPDVVVDETWFSDPAFCEESKLWY 162 (322)
T ss_pred eCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEccCHHHhcCCCcCCCCCCcCCcccCCChhHhhcccchH
Confidence 8421 0 23344555 8999999999864 42211 0 0 010 011
Q ss_pred HHHHHHHHHHHHH----HhCCCCEEEEecCCcccCCCCCc-cee-------e----ecCCCCCCccCHHHHHHHHHHHhh
Q 021928 208 NARKLAEQDESML----MASGIPYTIIRTGVLQNTPGGKQ-GFQ-------F----EEGCAANGSLSKEDAAFICVEALE 271 (305)
Q Consensus 208 ~~~~~~~~aE~~l----~~~gi~~tilRPg~l~~~~~~~~-~~~-------~----~~~~~~~~~Is~~DvA~~iv~~l~ 271 (305)
. ..|..+|+++ ++.+++++++||+.+.+...... ... . ..++....+|+++|+|++++.+++
T Consensus 163 ~--~sK~~~E~~~~~~~~~~~~~~~~lRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~ 240 (322)
T PLN02662 163 V--LSKTLAEEAAWKFAKENGIDMVTINPAMVIGPLLQPTLNTSAEAILNLINGAQTFPNASYRWVDVRDVANAHIQAFE 240 (322)
T ss_pred H--HHHHHHHHHHHHHHHHcCCcEEEEeCCcccCCCCCCCCCchHHHHHHHhcCCccCCCCCcCeEEHHHHHHHHHHHhc
Confidence 1 1233445443 45799999999999654321100 000 0 112344678999999999999998
Q ss_pred CCCCCCcEEEEecCCcCHHHHHHHHHHhhh
Q 021928 272 SIPQTGLIFEVVNGEEKVSDWKKCFSRLME 301 (305)
Q Consensus 272 ~~~~~~~~~~v~~g~~s~~d~~~~~~~l~~ 301 (305)
++...+ .|++.+...+++|+++++.+..+
T Consensus 241 ~~~~~~-~~~~~g~~~s~~e~~~~i~~~~~ 269 (322)
T PLN02662 241 IPSASG-RYCLVERVVHYSEVVKILHELYP 269 (322)
T ss_pred CcCcCC-cEEEeCCCCCHHHHHHHHHHHCC
Confidence 765444 68888666799999999988754
|
|
| >PLN02572 UDP-sulfoquinovose synthase | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.1e-20 Score=182.78 Aligned_cols=202 Identities=19% Similarity=0.195 Sum_probs=142.1
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchh-----------------h------hhcCCCcEEeecCCCC
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-----------------M------ESFGTYVESMAGDASN 152 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~-----------------~------~~~~~~v~~v~~D~~d 152 (305)
.++|+||||||+||||++|+++|+++|++|++++|..... . .....+++++.+|+.|
T Consensus 45 ~~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~d 124 (442)
T PLN02572 45 SKKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELYVGDICD 124 (442)
T ss_pred ccCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceEEECCCCC
Confidence 3568999999999999999999999999999986421100 0 0012358899999999
Q ss_pred HHHHHHHhcC--ccEEEECCcc-------------------------hHhhhhhhcCCC-EEEEEcccccccCCC-----
Q 021928 153 KKFLKTALRG--VRSIICPSEG-------------------------FISNAGSLKGVQ-HVILLSQLSVYRGSG----- 199 (305)
Q Consensus 153 ~~~~~~~~~~--~d~Vi~~~~g-------------------------~~~~~a~~~gv~-~~V~iSS~~~~~~~~----- 199 (305)
.+.+.+++++ +|+|||+++. .+.+++++.+++ +||++||..+|+...
T Consensus 125 ~~~v~~~l~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~gv~~~~V~~SS~~vYG~~~~~~~E 204 (442)
T PLN02572 125 FEFLSEAFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFAPDCHLVKLGTMGEYGTPNIDIEE 204 (442)
T ss_pred HHHHHHHHHhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhCCCccEEEEecceecCCCCCCCcc
Confidence 9999999984 7999998421 033456778886 999999999886321
Q ss_pred ----------------CcccccchHHHHHHHHHHHHH----HhCCCCEEEEecCCcccCCC-------------------
Q 021928 200 ----------------GIQALMKGNARKLAEQDESML----MASGIPYTIIRTGVLQNTPG------------------- 240 (305)
Q Consensus 200 ----------------~~~~~~~~~~~~~~~~aE~~l----~~~gi~~tilRPg~l~~~~~------------------- 240 (305)
...+...|... |..+|.++ +..+++++++||+.+++...
T Consensus 205 ~~i~~~~~~~e~~~~~~~~P~s~Yg~S--K~a~E~l~~~~~~~~gl~~v~lR~~~vyGp~~~~~~~~~~li~~~~~~~~~ 282 (442)
T PLN02572 205 GYITITHNGRTDTLPYPKQASSFYHLS--KVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETMMDEELINRLDYDGVF 282 (442)
T ss_pred cccccccccccccccCCCCCCCcchhH--HHHHHHHHHHHHHhcCCCEEEEecccccCCCCcccccccccccccCcccch
Confidence 11111223322 33345444 34699999999998654211
Q ss_pred ------------CCcce-eeecCCCCCCccCHHHHHHHHHHHhhCCCCCC--cEEEEecCCcCHHHHHHHHHHh
Q 021928 241 ------------GKQGF-QFEEGCAANGSLSKEDAAFICVEALESIPQTG--LIFEVVNGEEKVSDWKKCFSRL 299 (305)
Q Consensus 241 ------------~~~~~-~~~~~~~~~~~Is~~DvA~~iv~~l~~~~~~~--~~~~v~~g~~s~~d~~~~~~~l 299 (305)
.++.+ .++.+....++++++|+|++++.+++++...+ .+||+++.+.++.|+++.+.++
T Consensus 283 ~~~i~~~~~~~~~g~~i~v~g~G~~~Rdfi~V~Dva~a~~~al~~~~~~g~~~i~Nigs~~~si~el~~~i~~~ 356 (442)
T PLN02572 283 GTALNRFCVQAAVGHPLTVYGKGGQTRGFLDIRDTVRCIEIAIANPAKPGEFRVFNQFTEQFSVNELAKLVTKA 356 (442)
T ss_pred hhHHHHHHHHHhcCCCceecCCCCEEECeEEHHHHHHHHHHHHhChhhcCceeEEEeCCCceeHHHHHHHHHHH
Confidence 01222 22345555789999999999999998653333 5899977667999999999998
|
|
| >TIGR03466 HpnA hopanoid-associated sugar epimerase | Back alignment and domain information |
|---|
Probab=99.86 E-value=3.1e-20 Score=171.48 Aligned_cols=202 Identities=17% Similarity=0.158 Sum_probs=145.2
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEECCcc------
Q 021928 99 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG------ 172 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~g------ 172 (305)
|+|+||||+|+||+++++.|+++|++|++++|+++........+++++.+|+.|.+++.++++++|+|||+++.
T Consensus 1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~d~vi~~a~~~~~~~~ 80 (328)
T TIGR03466 1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNLEGLDVEIVEGDLRDPASLRKAVAGCRALFHVAADYRLWAP 80 (328)
T ss_pred CeEEEECCccchhHHHHHHHHHCCCEEEEEEecCccccccccCCceEEEeeCCCHHHHHHHHhCCCEEEEeceecccCCC
Confidence 57999999999999999999999999999999876543322336889999999999999999999999987321
Q ss_pred --------------hHhhhhhhcCCCEEEEEcccccccCC-CC--------ccc---ccchHHHHHHHHHHHHHH----h
Q 021928 173 --------------FISNAGSLKGVQHVILLSQLSVYRGS-GG--------IQA---LMKGNARKLAEQDESMLM----A 222 (305)
Q Consensus 173 --------------~~~~~a~~~gv~~~V~iSS~~~~~~~-~~--------~~~---~~~~~~~~~~~~aE~~l~----~ 222 (305)
.+.+++.+.++++||++||..++... .+ ..+ ...| ...|..+|++++ .
T Consensus 81 ~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~~~~~Y--~~sK~~~e~~~~~~~~~ 158 (328)
T TIGR03466 81 DPEEMYAANVEGTRNLLRAALEAGVERVVYTSSVATLGVRGDGTPADETTPSSLDDMIGHY--KRSKFLAEQAALEMAAE 158 (328)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEechhhcCcCCCCCCcCccCCCCcccccChH--HHHHHHHHHHHHHHHHh
Confidence 13455677889999999998887531 11 000 1112 222344555544 3
Q ss_pred CCCCEEEEecCCcccCCCC-Ccc---e--------eeecCCCCCCccCHHHHHHHHHHHhhCCCCCCcEEEEecCCcCHH
Q 021928 223 SGIPYTIIRTGVLQNTPGG-KQG---F--------QFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVVNGEEKVS 290 (305)
Q Consensus 223 ~gi~~tilRPg~l~~~~~~-~~~---~--------~~~~~~~~~~~Is~~DvA~~iv~~l~~~~~~~~~~~v~~g~~s~~ 290 (305)
.+++++++||+.+.+.... ... . .....+....+++++|+|++++.+++++. .+..|++++...++.
T Consensus 159 ~~~~~~ilR~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~-~~~~~~~~~~~~s~~ 237 (328)
T TIGR03466 159 KGLPVVIVNPSTPIGPRDIKPTPTGRIIVDFLNGKMPAYVDTGLNLVHVDDVAEGHLLALERGR-IGERYILGGENLTLK 237 (328)
T ss_pred cCCCEEEEeCCccCCCCCCCCCcHHHHHHHHHcCCCceeeCCCcceEEHHHHHHHHHHHHhCCC-CCceEEecCCCcCHH
Confidence 6899999999986532211 000 0 00112334578999999999999998753 577888875557999
Q ss_pred HHHHHHHHhhhhc
Q 021928 291 DWKKCFSRLMEKT 303 (305)
Q Consensus 291 d~~~~~~~l~~~~ 303 (305)
|+++.+.++.+++
T Consensus 238 e~~~~i~~~~g~~ 250 (328)
T TIGR03466 238 QILDKLAEITGRP 250 (328)
T ss_pred HHHHHHHHHhCCC
Confidence 9999999988864
|
The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. |
| >PLN02650 dihydroflavonol-4-reductase | Back alignment and domain information |
|---|
Probab=99.86 E-value=5.3e-20 Score=172.62 Aligned_cols=200 Identities=14% Similarity=0.130 Sum_probs=137.7
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh---hc-----CCCcEEeecCCCCHHHHHHHhcCccEEEEC
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SF-----GTYVESMAGDASNKKFLKTALRGVRSIICP 169 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~---~~-----~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~ 169 (305)
.++||||||+||||++++++|+++|++|++++|+.+.... .. ..+++++.+|+.|.+.+.++++++|+|||+
T Consensus 5 ~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~d~ViH~ 84 (351)
T PLN02650 5 KETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIRGCTGVFHV 84 (351)
T ss_pred CCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHhCCCEEEEe
Confidence 4799999999999999999999999999999998654321 11 125788999999999999999999999988
Q ss_pred Ccc---------------------hHhhhhhhcC-CCEEEEEcccccccCCCC--c----c-------------cccchH
Q 021928 170 SEG---------------------FISNAGSLKG-VQHVILLSQLSVYRGSGG--I----Q-------------ALMKGN 208 (305)
Q Consensus 170 ~~g---------------------~~~~~a~~~g-v~~~V~iSS~~~~~~~~~--~----~-------------~~~~~~ 208 (305)
++. .+.+++.+.+ +++||++||.+++..... + . +...|.
T Consensus 85 A~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~r~v~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~ 164 (351)
T PLN02650 85 ATPMDFESKDPENEVIKPTVNGMLSIMKACAKAKTVRRIVFTSSAGTVNVEEHQKPVYDEDCWSDLDFCRRKKMTGWMYF 164 (351)
T ss_pred CCCCCCCCCCchhhhhhHHHHHHHHHHHHHHhcCCceEEEEecchhhcccCCCCCCccCcccCCchhhhhccccccchHH
Confidence 320 0234455555 789999999866532110 0 0 001122
Q ss_pred HHHHHHHHHHHH----HhCCCCEEEEecCCcccCCCCC---------------cceeeecCCCCCCccCHHHHHHHHHHH
Q 021928 209 ARKLAEQDESML----MASGIPYTIIRTGVLQNTPGGK---------------QGFQFEEGCAANGSLSKEDAAFICVEA 269 (305)
Q Consensus 209 ~~~~~~~aE~~l----~~~gi~~tilRPg~l~~~~~~~---------------~~~~~~~~~~~~~~Is~~DvA~~iv~~ 269 (305)
..|..+|.++ ++.+++++++||+.+.+..... ....+ .......+++++|+|++++.+
T Consensus 165 --~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~r~~v~V~Dva~a~~~~ 241 (351)
T PLN02650 165 --VSKTLAEKAAWKYAAENGLDFISIIPTLVVGPFISTSMPPSLITALSLITGNEAHY-SIIKQGQFVHLDDLCNAHIFL 241 (351)
T ss_pred --HHHHHHHHHHHHHHHHcCCeEEEECCCceECCCCCCCCCccHHHHHHHhcCCcccc-CcCCCcceeeHHHHHHHHHHH
Confidence 2234455443 4569999999999855432100 00000 011225789999999999999
Q ss_pred hhCCCCCCcEEEEecCCcCHHHHHHHHHHhhh
Q 021928 270 LESIPQTGLIFEVVNGEEKVSDWKKCFSRLME 301 (305)
Q Consensus 270 l~~~~~~~~~~~v~~g~~s~~d~~~~~~~l~~ 301 (305)
++++...+ .|++++.+.++.++++++.+..+
T Consensus 242 l~~~~~~~-~~i~~~~~~s~~el~~~i~~~~~ 272 (351)
T PLN02650 242 FEHPAAEG-RYICSSHDATIHDLAKMLREKYP 272 (351)
T ss_pred hcCcCcCc-eEEecCCCcCHHHHHHHHHHhCc
Confidence 98765444 67555455799999999988764
|
|
| >PRK10217 dTDP-glucose 4,6-dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=6.1e-20 Score=172.22 Aligned_cols=202 Identities=14% Similarity=0.106 Sum_probs=139.6
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcch---hh---hh-cCCCcEEeecCCCCHHHHHHHhcC--ccEEEE
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN---AM---ES-FGTYVESMAGDASNKKFLKTALRG--VRSIIC 168 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~---~~---~~-~~~~v~~v~~D~~d~~~~~~~~~~--~d~Vi~ 168 (305)
+++||||||+||||++++++|+++|++++++.++..+ .. .. ...+++++.+|+.|.+++.+++++ +|+|||
T Consensus 1 ~~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~Vih 80 (355)
T PRK10217 1 MRKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICDRAELARVFTEHQPDCVMH 80 (355)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccccchhhhhhcccCCceEEEECCCcChHHHHHHHhhcCCCEEEE
Confidence 4799999999999999999999999886655443221 11 11 113578899999999999999985 899999
Q ss_pred CCcc----------------------hHhhhhhh---------cCCCEEEEEcccccccCCC----------Ccccccch
Q 021928 169 PSEG----------------------FISNAGSL---------KGVQHVILLSQLSVYRGSG----------GIQALMKG 207 (305)
Q Consensus 169 ~~~g----------------------~~~~~a~~---------~gv~~~V~iSS~~~~~~~~----------~~~~~~~~ 207 (305)
+++. .+.+++.+ .++++||++||..+|.... ...+...|
T Consensus 81 ~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~E~~~~~p~s~Y 160 (355)
T PRK10217 81 LAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPY 160 (355)
T ss_pred CCcccCcchhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCCCCCCCCcCCCCCCCCCChh
Confidence 8431 02334433 3578999999988875311 11112222
Q ss_pred HHHHHHHHHHHHH----HhCCCCEEEEecCCcccCCC--------------CCcce-eeecCCCCCCccCHHHHHHHHHH
Q 021928 208 NARKLAEQDESML----MASGIPYTIIRTGVLQNTPG--------------GKQGF-QFEEGCAANGSLSKEDAAFICVE 268 (305)
Q Consensus 208 ~~~~~~~~aE~~l----~~~gi~~tilRPg~l~~~~~--------------~~~~~-~~~~~~~~~~~Is~~DvA~~iv~ 268 (305)
.. .|..+|.++ ++.+++++++||+.+.+... .+..+ .++.++...++++++|+|++++.
T Consensus 161 ~~--sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~D~a~a~~~ 238 (355)
T PRK10217 161 SA--SKASSDHLVRAWLRTYGLPTLITNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQIRDWLYVEDHARALYC 238 (355)
T ss_pred HH--HHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCCcccHHHHHHHHHhcCCCceEeCCCCeeeCcCcHHHHHHHHHH
Confidence 22 233344443 45799999999988553221 11222 23455667889999999999999
Q ss_pred HhhCCCCCCcEEEEecCC-cCHHHHHHHHHHhhhh
Q 021928 269 ALESIPQTGLIFEVVNGE-EKVSDWKKCFSRLMEK 302 (305)
Q Consensus 269 ~l~~~~~~~~~~~v~~g~-~s~~d~~~~~~~l~~~ 302 (305)
+++.. ..+.+||+++++ .++.|+++.+.+.+++
T Consensus 239 ~~~~~-~~~~~yni~~~~~~s~~~~~~~i~~~~~~ 272 (355)
T PRK10217 239 VATTG-KVGETYNIGGHNERKNLDVVETICELLEE 272 (355)
T ss_pred HHhcC-CCCCeEEeCCCCcccHHHHHHHHHHHhcc
Confidence 99764 346899999886 4899999999988764
|
|
| >PLN02989 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.86 E-value=5.9e-20 Score=170.25 Aligned_cols=202 Identities=14% Similarity=0.158 Sum_probs=140.8
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh---hc-----CCCcEEeecCCCCHHHHHHHhcCccEEEE
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SF-----GTYVESMAGDASNKKFLKTALRGVRSIIC 168 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~---~~-----~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~ 168 (305)
.+|+||||||+||||++++++|+++|++|++++|++.+... .. ..+++++.+|++|.+++.++++++|+|||
T Consensus 4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih 83 (325)
T PLN02989 4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAIDGCETVFH 83 (325)
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHcCCCEEEE
Confidence 46899999999999999999999999999999888754211 11 13588999999999999999999999998
Q ss_pred CCcch----------------------Hhhhhhh-cCCCEEEEEcccccccCCC----C---------ccc------ccc
Q 021928 169 PSEGF----------------------ISNAGSL-KGVQHVILLSQLSVYRGSG----G---------IQA------LMK 206 (305)
Q Consensus 169 ~~~g~----------------------~~~~a~~-~gv~~~V~iSS~~~~~~~~----~---------~~~------~~~ 206 (305)
+++.. +.+++.+ .++++||++||..++.... . ..+ ...
T Consensus 84 ~A~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~~~ 163 (325)
T PLN02989 84 TASPVAITVKTDPQVELINPAVNGTINVLRTCTKVSSVKRVILTSSMAAVLAPETKLGPNDVVDETFFTNPSFAEERKQW 163 (325)
T ss_pred eCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecchhheecCCccCCCCCccCcCCCCchhHhcccccc
Confidence 84310 2233444 3578999999987653211 0 000 011
Q ss_pred hHHHHHHHHHHHHHH----hCCCCEEEEecCCcccCCCCC-ccee---e-----e---cCCCCCCccCHHHHHHHHHHHh
Q 021928 207 GNARKLAEQDESMLM----ASGIPYTIIRTGVLQNTPGGK-QGFQ---F-----E---EGCAANGSLSKEDAAFICVEAL 270 (305)
Q Consensus 207 ~~~~~~~~~aE~~l~----~~gi~~tilRPg~l~~~~~~~-~~~~---~-----~---~~~~~~~~Is~~DvA~~iv~~l 270 (305)
|.. .|..+|.+++ +.+++++++||+.+.+..... ..+. + + .+.....+++++|+|++++.++
T Consensus 164 Y~~--sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~i~~~~~~~~~~~~~~r~~i~v~Dva~a~~~~l 241 (325)
T PLN02989 164 YVL--SKTLAEDAAWRFAKDNEIDLIVLNPGLVTGPILQPTLNFSVAVIVELMKGKNPFNTTHHRFVDVRDVALAHVKAL 241 (325)
T ss_pred hHH--HHHHHHHHHHHHHHHcCCeEEEEcCCceeCCCCCCCCCchHHHHHHHHcCCCCCCCcCcCeeEHHHHHHHHHHHh
Confidence 222 2444565543 469999999999965432110 0000 0 0 1112247899999999999999
Q ss_pred hCCCCCCcEEEEecCCcCHHHHHHHHHHhhh
Q 021928 271 ESIPQTGLIFEVVNGEEKVSDWKKCFSRLME 301 (305)
Q Consensus 271 ~~~~~~~~~~~v~~g~~s~~d~~~~~~~l~~ 301 (305)
+.+.. +..||++++..+++|+++++.++.+
T Consensus 242 ~~~~~-~~~~ni~~~~~s~~ei~~~i~~~~~ 271 (325)
T PLN02989 242 ETPSA-NGRYIIDGPVVTIKDIENVLREFFP 271 (325)
T ss_pred cCccc-CceEEEecCCCCHHHHHHHHHHHCC
Confidence 87654 4589997666799999999998875
|
|
| >PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated | Back alignment and domain information |
|---|
Probab=99.86 E-value=4.1e-20 Score=187.06 Aligned_cols=206 Identities=14% Similarity=0.098 Sum_probs=146.9
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhC-CCeEEEEEcCcchhhhhcC-CCcEEeecCCCCHHH-HHHHhcCccEEEECCc-
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVK-RTRIKALVKDKRNAMESFG-TYVESMAGDASNKKF-LKTALRGVRSIICPSE- 171 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~R~~~~~~~~~~-~~v~~v~~D~~d~~~-~~~~~~~~d~Vi~~~~- 171 (305)
.++|+||||||+||||++++++|+++ ||+|++++|.......... .+++++.+|++|... +.++++++|+|||+++
T Consensus 313 ~~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~gDl~d~~~~l~~~l~~~D~ViHlAa~ 392 (660)
T PRK08125 313 KRRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISRFLGHPRFHFVEGDISIHSEWIEYHIKKCDVVLPLVAI 392 (660)
T ss_pred hcCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhhhcCCCceEEEeccccCcHHHHHHHhcCCCEEEECccc
Confidence 45789999999999999999999986 7999999998754332222 368999999998655 6778899999999732
Q ss_pred -c--------------------hHhhhhhhcCCCEEEEEcccccccCCCC-c----------ccccc--hHHHHHHHHHH
Q 021928 172 -G--------------------FISNAGSLKGVQHVILLSQLSVYRGSGG-I----------QALMK--GNARKLAEQDE 217 (305)
Q Consensus 172 -g--------------------~~~~~a~~~gv~~~V~iSS~~~~~~~~~-~----------~~~~~--~~~~~~~~~aE 217 (305)
. .+.+++++.+ ++|||+||..+|..... + .+... ..+...|..+|
T Consensus 393 ~~~~~~~~~~~~~~~~Nv~~t~~ll~a~~~~~-~~~V~~SS~~vyg~~~~~~~~E~~~~~~~~p~~~p~s~Yg~sK~~~E 471 (660)
T PRK08125 393 ATPIEYTRNPLRVFELDFEENLKIIRYCVKYN-KRIIFPSTSEVYGMCTDKYFDEDTSNLIVGPINKQRWIYSVSKQLLD 471 (660)
T ss_pred cCchhhccCHHHHHHhhHHHHHHHHHHHHhcC-CeEEEEcchhhcCCCCCCCcCccccccccCCCCCCccchHHHHHHHH
Confidence 0 0345567777 89999999988763211 0 01000 01222344566
Q ss_pred HHHH----hCCCCEEEEecCCcccCCC----------------------CCcce-eeecCCCCCCccCHHHHHHHHHHHh
Q 021928 218 SMLM----ASGIPYTIIRTGVLQNTPG----------------------GKQGF-QFEEGCAANGSLSKEDAAFICVEAL 270 (305)
Q Consensus 218 ~~l~----~~gi~~tilRPg~l~~~~~----------------------~~~~~-~~~~~~~~~~~Is~~DvA~~iv~~l 270 (305)
++++ ..+++++++||+.+.+... .++.+ .++.+....++|+++|+|++++.++
T Consensus 472 ~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~i~~~i~~~~~~~~i~~~g~g~~~rd~i~v~Dva~a~~~~l 551 (660)
T PRK08125 472 RVIWAYGEKEGLRFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLVDGGKQKRCFTDIRDGIEALFRII 551 (660)
T ss_pred HHHHHHHHhcCCceEEEEEceeeCCCccccccccccccchHHHHHHHhcCCCCeEEeCCCceeeceeeHHHHHHHHHHHH
Confidence 6663 4689999999998553210 01222 2234556688999999999999999
Q ss_pred hCCC--CCCcEEEEecCC--cCHHHHHHHHHHhhhh
Q 021928 271 ESIP--QTGLIFEVVNGE--EKVSDWKKCFSRLMEK 302 (305)
Q Consensus 271 ~~~~--~~~~~~~v~~g~--~s~~d~~~~~~~l~~~ 302 (305)
+++. ..+++||+++++ .+++|+++.+.+..+.
T Consensus 552 ~~~~~~~~g~iyni~~~~~~~s~~el~~~i~~~~g~ 587 (660)
T PRK08125 552 ENKDNRCDGQIINIGNPDNEASIRELAEMLLASFEK 587 (660)
T ss_pred hccccccCCeEEEcCCCCCceeHHHHHHHHHHHhcc
Confidence 8753 347899999874 5999999999998874
|
|
| >PLN02583 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.85 E-value=2.2e-19 Score=164.95 Aligned_cols=203 Identities=15% Similarity=0.152 Sum_probs=137.0
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcch--h---hhhc---CCCcEEeecCCCCHHHHHHHhcCccEEE
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN--A---MESF---GTYVESMAGDASNKKFLKTALRGVRSII 167 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~--~---~~~~---~~~v~~v~~D~~d~~~~~~~~~~~d~Vi 167 (305)
..+++|+||||+|+||++++++|+++||+|++++|+... . .... +.+++++.+|++|.+++.+++.++|.|+
T Consensus 4 ~~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~~~~~l~~~d~v~ 83 (297)
T PLN02583 4 ESSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGLSCEEERLKVFDVDPLDYHSILDALKGCSGLF 83 (297)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHHhcccCCCceEEEEecCCCHHHHHHHHcCCCEEE
Confidence 346899999999999999999999999999999996432 1 1111 2368899999999999999999999999
Q ss_pred ECCc---c-----------------hHhhhhhhc-CCCEEEEEcccccccC--C-CC----cc--ccc--ch------HH
Q 021928 168 CPSE---G-----------------FISNAGSLK-GVQHVILLSQLSVYRG--S-GG----IQ--ALM--KG------NA 209 (305)
Q Consensus 168 ~~~~---g-----------------~~~~~a~~~-gv~~~V~iSS~~~~~~--~-~~----~~--~~~--~~------~~ 209 (305)
|..+ . .+.+++.+. ++++||++||.+++.. . .. .. ... .+ .+
T Consensus 84 ~~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~riV~~SS~~a~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y 163 (297)
T PLN02583 84 CCFDPPSDYPSYDEKMVDVEVRAAHNVLEACAQTDTIEKVVFTSSLTAVIWRDDNISTQKDVDERSWSDQNFCRKFKLWH 163 (297)
T ss_pred EeCccCCcccccHHHHHHHHHHHHHHHHHHHHhcCCccEEEEecchHheecccccCCCCCCCCcccCCCHHHHhhcccHH
Confidence 7521 0 033445554 6899999999876421 1 00 00 000 00 11
Q ss_pred HHHHHHHHHHH----HhCCCCEEEEecCCcccCCCCC-----cceeeecCCCCCCccCHHHHHHHHHHHhhCCCCCCcEE
Q 021928 210 RKLAEQDESML----MASGIPYTIIRTGVLQNTPGGK-----QGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIF 280 (305)
Q Consensus 210 ~~~~~~aE~~l----~~~gi~~tilRPg~l~~~~~~~-----~~~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~~~~~~~ 280 (305)
...|..+|+++ +..++++++|||+.+.+..... .......+.....+|+++|||++++.+++++...+ .|
T Consensus 164 ~~sK~~aE~~~~~~~~~~gi~~v~lrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~v~V~Dva~a~~~al~~~~~~~-r~ 242 (297)
T PLN02583 164 ALAKTLSEKTAWALAMDRGVNMVSINAGLLMGPSLTQHNPYLKGAAQMYENGVLVTVDVNFLVDAHIRAFEDVSSYG-RY 242 (297)
T ss_pred HHHHHHHHHHHHHHHHHhCCcEEEEcCCcccCCCCCCchhhhcCCcccCcccCcceEEHHHHHHHHHHHhcCcccCC-cE
Confidence 22244556655 3569999999999965432111 11001112234578999999999999999776655 68
Q ss_pred EEecCCcC-HHHHHHHHHHh
Q 021928 281 EVVNGEEK-VSDWKKCFSRL 299 (305)
Q Consensus 281 ~v~~g~~s-~~d~~~~~~~l 299 (305)
.+.++..+ ..++.+++.+.
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~ 262 (297)
T PLN02583 243 LCFNHIVNTEEDAVKLAQML 262 (297)
T ss_pred EEecCCCccHHHHHHHHHHh
Confidence 88877655 46677777764
|
|
| >COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.85 E-value=8.8e-20 Score=175.02 Aligned_cols=233 Identities=21% Similarity=0.289 Sum_probs=181.3
Q ss_pred hHHHHHHHhcCcccccccCCCCCCCCCCCCCCCccccccCcCCCCEEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcc
Q 021928 55 VDQILDYIEGGPKLRKWYGAPDLLPKDGSNEEDEEKEDEFPEARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKR 133 (305)
Q Consensus 55 ~~~~~~~~~~gp~lr~w~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~ 133 (305)
++++.+ +.+. +|. ..-.|+|.|+.-..+.........+ |+||||||+|.||+++|+|+++.+. ++++++|++.
T Consensus 213 ~~~l~~--~~~~-lre-I~ieDLLgR~pV~~d~~~i~~~~~g--K~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~ 286 (588)
T COG1086 213 LTDLKD--LNGQ-LRE-IEIEDLLGRPPVALDTELIGAMLTG--KTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEY 286 (588)
T ss_pred HHHHHH--hccc-ccc-CCHHHHhCCCCCCCCHHHHHhHcCC--CEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchH
Confidence 455555 3443 776 4455899888766666666666665 9999999999999999999999986 7888899886
Q ss_pred hhh-------hhcC-CCcEEeecCCCCHHHHHHHhcC--ccEEEECCc--------------------c--hHhhhhhhc
Q 021928 134 NAM-------ESFG-TYVESMAGDASNKKFLKTALRG--VRSIICPSE--------------------G--FISNAGSLK 181 (305)
Q Consensus 134 ~~~-------~~~~-~~v~~v~~D~~d~~~~~~~~~~--~d~Vi~~~~--------------------g--~~~~~a~~~ 181 (305)
+.. +.++ ..+.++.+|+.|.+.+..++++ +|+|||+++ | .++++|.+.
T Consensus 287 ~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~kvd~VfHAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~ 366 (588)
T COG1086 287 KLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEGHKVDIVFHAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKN 366 (588)
T ss_pred HHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhcCCCceEEEhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHh
Confidence 622 2233 4688999999999999999999 899999944 1 267789999
Q ss_pred CCCEEEEEcccccccCCCCcccccchHHHHHHHHHHHHHHh-----C--CCCEEEEecCCcccCCC-----------CCc
Q 021928 182 GVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMA-----S--GIPYTIIRTGVLQNTPG-----------GKQ 243 (305)
Q Consensus 182 gv~~~V~iSS~~~~~~~~~~~~~~~~~~~~~~~~aE~~l~~-----~--gi~~tilRPg~l~~~~~-----------~~~ 243 (305)
||++||++||..+.+|.+.++.. |+.+|.+++. + +..++++|-|.+.+..+ .+.
T Consensus 367 ~V~~~V~iSTDKAV~PtNvmGaT--------Kr~aE~~~~a~~~~~~~~~T~f~~VRFGNVlGSrGSViPlFk~QI~~Gg 438 (588)
T COG1086 367 GVKKFVLISTDKAVNPTNVMGAT--------KRLAEKLFQAANRNVSGTGTRFCVVRFGNVLGSRGSVIPLFKKQIAEGG 438 (588)
T ss_pred CCCEEEEEecCcccCCchHhhHH--------HHHHHHHHHHHhhccCCCCcEEEEEEecceecCCCCCHHHHHHHHHcCC
Confidence 99999999999999988877653 5566766553 2 47899999999765543 344
Q ss_pred ceeeecCCCCCCccCHHHHHHHHHHHhhCCCCCCcEEEEecCC-cCHHHHHHHHHHhhhh
Q 021928 244 GFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVVNGE-EKVSDWKKCFSRLMEK 302 (305)
Q Consensus 244 ~~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~~~~~~~~v~~g~-~s~~d~~~~~~~l~~~ 302 (305)
++.+..++-..-+++.+|.++.++++... ...|.+|-+-.|+ .++.|+++.+-+++|.
T Consensus 439 plTvTdp~mtRyfMTI~EAv~LVlqA~a~-~~gGeifvldMGepvkI~dLAk~mi~l~g~ 497 (588)
T COG1086 439 PLTVTDPDMTRFFMTIPEAVQLVLQAGAI-AKGGEIFVLDMGEPVKIIDLAKAMIELAGQ 497 (588)
T ss_pred CccccCCCceeEEEEHHHHHHHHHHHHhh-cCCCcEEEEcCCCCeEHHHHHHHHHHHhCC
Confidence 45555555567789999999999999864 5668999999866 5899999999999873
|
|
| >TIGR01472 gmd GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.9e-19 Score=168.40 Aligned_cols=201 Identities=13% Similarity=0.014 Sum_probs=141.4
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcch-----hhhhc-------CCCcEEeecCCCCHHHHHHHhcC--cc
Q 021928 99 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-----AMESF-------GTYVESMAGDASNKKFLKTALRG--VR 164 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~-----~~~~~-------~~~v~~v~~D~~d~~~~~~~~~~--~d 164 (305)
|+||||||+||||++++++|+++|++|++++|+++. ..... +.+++++.+|++|.+.+.+++++ +|
T Consensus 1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d 80 (343)
T TIGR01472 1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEIKPT 80 (343)
T ss_pred CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhCCCC
Confidence 589999999999999999999999999999997642 11111 23588999999999999999985 59
Q ss_pred EEEECCcc----------------------hHhhhhhhcCCC---EEEEEcccccccCCCC--------cccccchHHHH
Q 021928 165 SIICPSEG----------------------FISNAGSLKGVQ---HVILLSQLSVYRGSGG--------IQALMKGNARK 211 (305)
Q Consensus 165 ~Vi~~~~g----------------------~~~~~a~~~gv~---~~V~iSS~~~~~~~~~--------~~~~~~~~~~~ 211 (305)
+|||+++. .+.+++++.+++ +||++||..+|+.... ..+...|..
T Consensus 81 ~ViH~Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~-- 158 (343)
T TIGR01472 81 EIYNLAAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTLGLIKSVKFYQASTSELYGKVQEIPQNETTPFYPRSPYAA-- 158 (343)
T ss_pred EEEECCcccccchhhhChHHHHHHHHHHHHHHHHHHHHhCCCcCeeEEEeccHHhhCCCCCCCCCCCCCCCCCChhHH--
Confidence 99998431 034456666764 8999999988863211 111222222
Q ss_pred HHHHHHHHHH----hCCCCEEEEecCC-cccCCC----------------CCc--ceeeecCCCCCCccCHHHHHHHHHH
Q 021928 212 LAEQDESMLM----ASGIPYTIIRTGV-LQNTPG----------------GKQ--GFQFEEGCAANGSLSKEDAAFICVE 268 (305)
Q Consensus 212 ~~~~aE~~l~----~~gi~~tilRPg~-l~~~~~----------------~~~--~~~~~~~~~~~~~Is~~DvA~~iv~ 268 (305)
.|..+|.+++ +.++++++.|+.. +.+... .++ ...++.++....+++++|+|++++.
T Consensus 159 sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~V~D~a~a~~~ 238 (343)
T TIGR01472 159 AKLYAHWITVNYREAYGLFAVNGILFNHESPRRGENFVTRKITRAAAKIKLGLQEKLYLGNLDAKRDWGHAKDYVEAMWL 238 (343)
T ss_pred HHHHHHHHHHHHHHHhCCceEEEeecccCCCCCCccccchHHHHHHHHHHcCCCCceeeCCCccccCceeHHHHHHHHHH
Confidence 3445565553 3578888777643 221110 011 1223455667899999999999999
Q ss_pred HhhCCCCCCcEEEEecCC-cCHHHHHHHHHHhhhhc
Q 021928 269 ALESIPQTGLIFEVVNGE-EKVSDWKKCFSRLMEKT 303 (305)
Q Consensus 269 ~l~~~~~~~~~~~v~~g~-~s~~d~~~~~~~l~~~~ 303 (305)
+++++. +..|||++++ .++.|+++.+.++++++
T Consensus 239 ~~~~~~--~~~yni~~g~~~s~~e~~~~i~~~~g~~ 272 (343)
T TIGR01472 239 MLQQDK--PDDYVIATGETHSVREFVEVSFEYIGKT 272 (343)
T ss_pred HHhcCC--CccEEecCCCceeHHHHHHHHHHHcCCC
Confidence 997653 3589999876 58999999999988853
|
Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116). |
| >TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.1e-19 Score=163.39 Aligned_cols=185 Identities=16% Similarity=0.217 Sum_probs=138.7
Q ss_pred EEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCc--cEEEECCcc-----
Q 021928 100 AVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGV--RSIICPSEG----- 172 (305)
Q Consensus 100 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~--d~Vi~~~~g----- 172 (305)
+||||||+|+||++++++|+++|++|++++|. .+|+.|.+++.++++++ |+|||+++.
T Consensus 1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~---------------~~d~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~ 65 (287)
T TIGR01214 1 RILITGANGQLGRELVQQLSPEGRVVVALTSS---------------QLDLTDPEALERLLRAIRPDAVVNTAAYTDVDG 65 (287)
T ss_pred CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc---------------ccCCCCHHHHHHHHHhCCCCEEEECCccccccc
Confidence 58999999999999999999999999999885 47999999999999876 999988321
Q ss_pred -----------------hHhhhhhhcCCCEEEEEcccccccCCCC--------cccccchHHHHHHHHHHHHHHhCCCCE
Q 021928 173 -----------------FISNAGSLKGVQHVILLSQLSVYRGSGG--------IQALMKGNARKLAEQDESMLMASGIPY 227 (305)
Q Consensus 173 -----------------~~~~~a~~~gv~~~V~iSS~~~~~~~~~--------~~~~~~~~~~~~~~~aE~~l~~~gi~~ 227 (305)
.+.+++++.++ +||++||..+|.+... ..+.. .....|..+|.+++..++++
T Consensus 66 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~v~~Ss~~vy~~~~~~~~~E~~~~~~~~--~Y~~~K~~~E~~~~~~~~~~ 142 (287)
T TIGR01214 66 AESDPEKAFAVNALAPQNLARAAARHGA-RLVHISTDYVFDGEGKRPYREDDATNPLN--VYGQSKLAGEQAIRAAGPNA 142 (287)
T ss_pred cccCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEeeeeeecCCCCCCCCCCCCCCCcc--hhhHHHHHHHHHHHHhCCCe
Confidence 02334555665 8999999988754211 11111 12334567899998889999
Q ss_pred EEEecCCcccCCC-------------CCcceeeecCCCCCCccCHHHHHHHHHHHhhCCCCCCcEEEEecCC-cCHHHHH
Q 021928 228 TIIRTGVLQNTPG-------------GKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVVNGE-EKVSDWK 293 (305)
Q Consensus 228 tilRPg~l~~~~~-------------~~~~~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~~~~~~~~v~~g~-~s~~d~~ 293 (305)
+++||+.+++... .+..+.. .++....+++++|+|++++.++..+...+++||+++++ .++.|+.
T Consensus 143 ~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~v~Dva~a~~~~~~~~~~~~~~~ni~~~~~~s~~e~~ 221 (287)
T TIGR01214 143 LIVRTSWLYGGGGGRNFVRTMLRLAGRGEELRV-VDDQIGSPTYAKDLARVIAALLQRLARARGVYHLANSGQCSWYEFA 221 (287)
T ss_pred EEEEeeecccCCCCCCHHHHHHHHhhcCCCceE-ecCCCcCCcCHHHHHHHHHHHHhhccCCCCeEEEECCCCcCHHHHH
Confidence 9999999654321 0111111 22344678999999999999998765567899999865 6899999
Q ss_pred HHHHHhhhhc
Q 021928 294 KCFSRLMEKT 303 (305)
Q Consensus 294 ~~~~~l~~~~ 303 (305)
+.+.+..+..
T Consensus 222 ~~i~~~~~~~ 231 (287)
T TIGR01214 222 QAIFEEAGAD 231 (287)
T ss_pred HHHHHHhCcc
Confidence 9999988764
|
This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc. |
| >PLN00198 anthocyanidin reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.2e-19 Score=167.47 Aligned_cols=202 Identities=13% Similarity=0.130 Sum_probs=137.7
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh-----hcC--CCcEEeecCCCCHHHHHHHhcCccEEEEC
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME-----SFG--TYVESMAGDASNKKFLKTALRGVRSIICP 169 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~-----~~~--~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~ 169 (305)
.+++||||||+||||++++++|+++|++|++++|+...... ... .+++++.+|++|.+++.++++++|+|||+
T Consensus 8 ~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~ 87 (338)
T PLN00198 8 GKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAHLRALQELGDLKIFGADLTDEESFEAPIAGCDLVFHV 87 (338)
T ss_pred CCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHhcCCCCceEEEEcCCCChHHHHHHHhcCCEEEEe
Confidence 35899999999999999999999999999999988643211 111 25889999999999999999999999988
Q ss_pred Ccc-------h--------------Hhhhhhhc-CCCEEEEEcccccccCCC----C-----------------cccccc
Q 021928 170 SEG-------F--------------ISNAGSLK-GVQHVILLSQLSVYRGSG----G-----------------IQALMK 206 (305)
Q Consensus 170 ~~g-------~--------------~~~~a~~~-gv~~~V~iSS~~~~~~~~----~-----------------~~~~~~ 206 (305)
++. . +.+++.+. ++++||++||..+|.... . ..+...
T Consensus 88 A~~~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~~~~~~v~~SS~~~~g~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~ 167 (338)
T PLN00198 88 ATPVNFASEDPENDMIKPAIQGVHNVLKACAKAKSVKRVILTSSAAAVSINKLSGTGLVMNEKNWTDVEFLTSEKPPTWG 167 (338)
T ss_pred CCCCccCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeecceeeeccCCCCCCceeccccCCchhhhhhcCCccch
Confidence 431 0 23334444 689999999998775211 0 011112
Q ss_pred hHHHHHHHHHHHHH----HhCCCCEEEEecCCcccCCCC---------------Ccceee-e-cCC----CCCCccCHHH
Q 021928 207 GNARKLAEQDESML----MASGIPYTIIRTGVLQNTPGG---------------KQGFQF-E-EGC----AANGSLSKED 261 (305)
Q Consensus 207 ~~~~~~~~~aE~~l----~~~gi~~tilRPg~l~~~~~~---------------~~~~~~-~-~~~----~~~~~Is~~D 261 (305)
|.. .|..+|.++ ++.+++++++||+.+++.... ++.+.+ + .+. ....+++++|
T Consensus 168 Y~~--sK~~~E~~~~~~~~~~~~~~~~~R~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~V~D 245 (338)
T PLN00198 168 YPA--SKTLAEKAAWKFAEENNIDLITVIPTLMAGPSLTSDIPSSLSLAMSLITGNEFLINGLKGMQMLSGSISITHVED 245 (338)
T ss_pred hHH--HHHHHHHHHHHHHHhcCceEEEEeCCceECCCccCCCCCcHHHHHHHHcCCccccccccccccccCCcceeEHHH
Confidence 222 233455444 346999999999996543210 001111 1 011 1247899999
Q ss_pred HHHHHHHHhhCCCCCCcEEEEecCCcCHHHHHHHHHHhhh
Q 021928 262 AAFICVEALESIPQTGLIFEVVNGEEKVSDWKKCFSRLME 301 (305)
Q Consensus 262 vA~~iv~~l~~~~~~~~~~~v~~g~~s~~d~~~~~~~l~~ 301 (305)
+|++++.+++.+... ..|+.++.+.++.++++.+.+...
T Consensus 246 ~a~a~~~~~~~~~~~-~~~~~~~~~~s~~el~~~i~~~~~ 284 (338)
T PLN00198 246 VCRAHIFLAEKESAS-GRYICCAANTSVPELAKFLIKRYP 284 (338)
T ss_pred HHHHHHHHhhCcCcC-CcEEEecCCCCHHHHHHHHHHHCC
Confidence 999999999875433 357555455689999999987764
|
|
| >TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.4e-19 Score=168.15 Aligned_cols=201 Identities=13% Similarity=0.066 Sum_probs=141.0
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh---h--cCCCcEEeecCCCCHHHHHHHhcC--ccEEEECC
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---S--FGTYVESMAGDASNKKFLKTALRG--VRSIICPS 170 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~---~--~~~~v~~v~~D~~d~~~~~~~~~~--~d~Vi~~~ 170 (305)
+|+||||||+||||++++++|+++|++|++++|+...... . ...+++++.+|++|.+++.+++++ +|+|||++
T Consensus 4 ~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vih~A 83 (349)
T TIGR02622 4 GKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDAAKLRKAIAEFKPEIVFHLA 83 (349)
T ss_pred CCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhhcCCceEEEccCCCHHHHHHHHhhcCCCEEEECC
Confidence 5899999999999999999999999999999998654221 1 123577899999999999999985 59999884
Q ss_pred cc----------------------hHhhhhhhcC-CCEEEEEcccccccCCC---------CcccccchHHHHHHHHHHH
Q 021928 171 EG----------------------FISNAGSLKG-VQHVILLSQLSVYRGSG---------GIQALMKGNARKLAEQDES 218 (305)
Q Consensus 171 ~g----------------------~~~~~a~~~g-v~~~V~iSS~~~~~~~~---------~~~~~~~~~~~~~~~~aE~ 218 (305)
+. .+.++++..+ +++||++||..+|.... ...+...|.. .|..+|.
T Consensus 84 ~~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~~e~~~~~p~~~Y~~--sK~~~e~ 161 (349)
T TIGR02622 84 AQPLVRKSYADPLETFETNVMGTVNLLEAIRAIGSVKAVVNVTSDKCYRNDEWVWGYRETDPLGGHDPYSS--SKACAEL 161 (349)
T ss_pred cccccccchhCHHHHHHHhHHHHHHHHHHHHhcCCCCEEEEEechhhhCCCCCCCCCccCCCCCCCCcchh--HHHHHHH
Confidence 31 0334455555 78999999987775321 1112222322 2333444
Q ss_pred HHHh-----------CCCCEEEEecCCcccCCC---------------CCcceeeecCCCCCCccCHHHHHHHHHHHhhC
Q 021928 219 MLMA-----------SGIPYTIIRTGVLQNTPG---------------GKQGFQFEEGCAANGSLSKEDAAFICVEALES 272 (305)
Q Consensus 219 ~l~~-----------~gi~~tilRPg~l~~~~~---------------~~~~~~~~~~~~~~~~Is~~DvA~~iv~~l~~ 272 (305)
+++. .+++++++||+.+++... .++...++.+.....+++++|+|++++.+++.
T Consensus 162 ~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~rd~i~v~D~a~a~~~~~~~ 241 (349)
T TIGR02622 162 VIASYRSSFFGVANFHGIKIASARAGNVIGGGDWAEDRLIPDVIRAFSSNKIVIIRNPDATRPWQHVLEPLSGYLLLAEK 241 (349)
T ss_pred HHHHHHHHhhcccccCCCcEEEEccCcccCCCcchhhhhhHHHHHHHhcCCCeEECCCCcccceeeHHHHHHHHHHHHHH
Confidence 4432 289999999999654210 22334444556668899999999999988764
Q ss_pred C----CCCCcEEEEecC---CcCHHHHHHHHHHhh
Q 021928 273 I----PQTGLIFEVVNG---EEKVSDWKKCFSRLM 300 (305)
Q Consensus 273 ~----~~~~~~~~v~~g---~~s~~d~~~~~~~l~ 300 (305)
. ...+++|||+++ +.++.++++.+.+..
T Consensus 242 ~~~~~~~~~~~yni~s~~~~~~s~~~~~~~i~~~~ 276 (349)
T TIGR02622 242 LFTGQAEFAGAWNFGPRASDNARVVELVVDALEFW 276 (349)
T ss_pred HhhcCccccceeeeCCCcccCcCHHHHHHHHHHHh
Confidence 2 123579999975 358899988777654
|
Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose. |
| >PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor | Back alignment and domain information |
|---|
Probab=99.84 E-value=5.9e-20 Score=161.69 Aligned_cols=181 Identities=23% Similarity=0.241 Sum_probs=135.6
Q ss_pred EEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh-cCCCcEEeecCCCCHHHHHHHhcCc--cEEEECCcc-----
Q 021928 101 VLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-FGTYVESMAGDASNKKFLKTALRGV--RSIICPSEG----- 172 (305)
Q Consensus 101 vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~-~~~~v~~v~~D~~d~~~~~~~~~~~--d~Vi~~~~g----- 172 (305)
||||||+|+||++++++|+++|++|+.+.|+....... ...+++++.+|+.|.+.+.+++++. |+|||+++.
T Consensus 1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~~~~~~~~d~vi~~a~~~~~~~ 80 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKKLNVEFVIGDLTDKEQLEKLLEKANIDVVIHLAAFSSNPE 80 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHHTTEEEEESETTSHHHHHHHHHHHTESEEEEEBSSSSHHH
T ss_pred EEEEccCCHHHHHHHHHHHHcCCccccccccccccccccccceEEEEEeeccccccccccccccCceEEEEeeccccccc
Confidence 79999999999999999999999999999987654221 1126899999999999999999877 999987321
Q ss_pred -----------------hHhhhhhhcCCCEEEEEcccccccCCCCc--------ccccchHHHHHHHHHHHHHH----hC
Q 021928 173 -----------------FISNAGSLKGVQHVILLSQLSVYRGSGGI--------QALMKGNARKLAEQDESMLM----AS 223 (305)
Q Consensus 173 -----------------~~~~~a~~~gv~~~V~iSS~~~~~~~~~~--------~~~~~~~~~~~~~~aE~~l~----~~ 223 (305)
.+.+++.+.++++||++||..+|...... .+...|. ..|...|++++ ..
T Consensus 81 ~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~sS~~~y~~~~~~~~~e~~~~~~~~~Y~--~~K~~~e~~~~~~~~~~ 158 (236)
T PF01370_consen 81 SFEDPEEIIEANVQGTRNLLEAAREAGVKRFIFLSSASVYGDPDGEPIDEDSPINPLSPYG--ASKRAAEELLRDYAKKY 158 (236)
T ss_dssp HHHSHHHHHHHHHHHHHHHHHHHHHHTTSEEEEEEEGGGGTSSSSSSBETTSGCCHSSHHH--HHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc--ccccccccccccccccc
Confidence 14456788899999999999888754211 1122222 23444455444 46
Q ss_pred CCCEEEEecCCcccCC----C-------------CCc-ceeeecCCCCCCccCHHHHHHHHHHHhhCCCCCCcEEEEe
Q 021928 224 GIPYTIIRTGVLQNTP----G-------------GKQ-GFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVV 283 (305)
Q Consensus 224 gi~~tilRPg~l~~~~----~-------------~~~-~~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~~~~~~~~v~ 283 (305)
+++++++||+.+.+.. . .++ ...++.++....+++++|+|++++.+++++...+++|||+
T Consensus 159 ~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~yNig 236 (236)
T PF01370_consen 159 GLRVTILRPPNVYGPGNPNNNSSSFLPSLIRQALKGKPIKIPGDGSQVRDFIHVDDLAEAIVAALENPKAAGGIYNIG 236 (236)
T ss_dssp TSEEEEEEESEEESTTSSSSSTSSHHHHHHHHHHTTSSEEEESTSSCEEEEEEHHHHHHHHHHHHHHSCTTTEEEEES
T ss_pred ccccccccccccccccccccccccccchhhHHhhcCCcccccCCCCCccceEEHHHHHHHHHHHHhCCCCCCCEEEeC
Confidence 9999999999965433 1 123 2233556677899999999999999999988788999984
|
The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B .... |
| >PLN02686 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.84 E-value=3.2e-19 Score=168.64 Aligned_cols=205 Identities=14% Similarity=0.101 Sum_probs=141.1
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh--hc---------CCCcEEeecCCCCHHHHHHHhcCc
Q 021928 95 PEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME--SF---------GTYVESMAGDASNKKFLKTALRGV 163 (305)
Q Consensus 95 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~--~~---------~~~v~~v~~D~~d~~~~~~~~~~~ 163 (305)
..++|+||||||+||||++++++|+++|++|++++|+.+.... .. ...+.++.+|++|.+++.++++++
T Consensus 50 ~~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i~~~ 129 (367)
T PLN02686 50 DAEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKLREMEMFGEMGRSNDGIWTVMANLTEPESLHEAFDGC 129 (367)
T ss_pred CCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhccccccCCceEEEEcCCCCHHHHHHHHHhc
Confidence 3457899999999999999999999999999999988654221 11 124788999999999999999999
Q ss_pred cEEEECCc-----c-----------------hHhhhhhhc-CCCEEEEEcccc--cccC---CC-C--cc----------
Q 021928 164 RSIICPSE-----G-----------------FISNAGSLK-GVQHVILLSQLS--VYRG---SG-G--IQ---------- 202 (305)
Q Consensus 164 d~Vi~~~~-----g-----------------~~~~~a~~~-gv~~~V~iSS~~--~~~~---~~-~--~~---------- 202 (305)
|.|||+++ + .+.+++++. ++++||++||.. +|.. .. + ..
T Consensus 130 d~V~hlA~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~~~v~r~V~~SS~~~~vyg~~~~~~~~~~i~E~~~~~~~~~ 209 (367)
T PLN02686 130 AGVFHTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRTESVRKCVFTSSLLACVWRQNYPHDLPPVIDEESWSDESFC 209 (367)
T ss_pred cEEEecCeeecccccccccchhhhhhHHHHHHHHHHHHhcCCccEEEEeccHHHhcccccCCCCCCcccCCCCCCChhhc
Confidence 99998721 1 034556654 799999999963 3321 11 0 00
Q ss_pred --cccchHHHHHHHHHHHHH----HhCCCCEEEEecCCcccCCCC--C---------cceeeecCCCCCCccCHHHHHHH
Q 021928 203 --ALMKGNARKLAEQDESML----MASGIPYTIIRTGVLQNTPGG--K---------QGFQFEEGCAANGSLSKEDAAFI 265 (305)
Q Consensus 203 --~~~~~~~~~~~~~aE~~l----~~~gi~~tilRPg~l~~~~~~--~---------~~~~~~~~~~~~~~Is~~DvA~~ 265 (305)
+...|. ..|..+|.++ ++.++++++|||+.+.+.... . ....+ .++....+++++|+|++
T Consensus 210 ~~p~~~Y~--~sK~~~E~~~~~~~~~~gl~~v~lRp~~vyGp~~~~~~~~~~~~~~~g~~~~-~g~g~~~~v~V~Dva~A 286 (367)
T PLN02686 210 RDNKLWYA--LGKLKAEKAAWRAARGKGLKLATICPALVTGPGFFRRNSTATIAYLKGAQEM-LADGLLATADVERLAEA 286 (367)
T ss_pred ccccchHH--HHHHHHHHHHHHHHHhcCceEEEEcCCceECCCCCCCCChhHHHHhcCCCcc-CCCCCcCeEEHHHHHHH
Confidence 011122 2244455554 346999999999996543210 0 00111 22333468999999999
Q ss_pred HHHHhhCC--CCCCcEEEEecCC-cCHHHHHHHHHHhhhhc
Q 021928 266 CVEALESI--PQTGLIFEVVNGE-EKVSDWKKCFSRLMEKT 303 (305)
Q Consensus 266 iv~~l~~~--~~~~~~~~v~~g~-~s~~d~~~~~~~l~~~~ 303 (305)
++.+++.+ ...+..| ++++. .+++|+++.+.++++.+
T Consensus 287 ~~~al~~~~~~~~~~~y-i~~g~~~s~~e~~~~i~~~~g~~ 326 (367)
T PLN02686 287 HVCVYEAMGNKTAFGRY-ICFDHVVSREDEAEELARQIGLP 326 (367)
T ss_pred HHHHHhccCCCCCCCcE-EEeCCCccHHHHHHHHHHHcCCC
Confidence 99999853 2345678 66554 68999999999998754
|
|
| >PLN02896 cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.84 E-value=4.2e-19 Score=166.73 Aligned_cols=202 Identities=13% Similarity=0.137 Sum_probs=138.6
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh---c--CCCcEEeecCCCCHHHHHHHhcCccEEEECCc
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---F--GTYVESMAGDASNKKFLKTALRGVRSIICPSE 171 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~--~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~ 171 (305)
..|+||||||+||||++++++|+++|++|++++|+..+.... + ..+++++.+|+.|.+.+.++++++|+|||+++
T Consensus 9 ~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~A~ 88 (353)
T PLN02896 9 ATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQEEGSFDEAVKGCDGVFHVAA 88 (353)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhccCCeEEEEECCCCCHHHHHHHHcCCCEEEECCc
Confidence 458999999999999999999999999999999986543221 1 24588999999999999999999999999832
Q ss_pred ----ch-------------------------Hhhhhhhc-CCCEEEEEcccccccCCC--C-----c-----ccc-----
Q 021928 172 ----GF-------------------------ISNAGSLK-GVQHVILLSQLSVYRGSG--G-----I-----QAL----- 204 (305)
Q Consensus 172 ----g~-------------------------~~~~a~~~-gv~~~V~iSS~~~~~~~~--~-----~-----~~~----- 204 (305)
.. +.+++.+. ++++||++||..+|.... + . .+.
T Consensus 89 ~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~~~E~~~~p~~~~~~ 168 (353)
T PLN02896 89 SMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKTVKRVVFTSSISTLTAKDSNGRWRAVVDETCQTPIDHVWN 168 (353)
T ss_pred cccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcCCccEEEEEechhhccccccCCCCCCccCcccCCcHHHhhc
Confidence 10 12334444 488999999988875211 0 0 000
Q ss_pred -----cchHHHHHHHHHHHHH----HhCCCCEEEEecCCcccCCCC---------------Ccceeeec--CC----CCC
Q 021928 205 -----MKGNARKLAEQDESML----MASGIPYTIIRTGVLQNTPGG---------------KQGFQFEE--GC----AAN 254 (305)
Q Consensus 205 -----~~~~~~~~~~~aE~~l----~~~gi~~tilRPg~l~~~~~~---------------~~~~~~~~--~~----~~~ 254 (305)
..|.. .|..+|.++ +..+++++++||+.+++.... +....++. +. ...
T Consensus 169 ~~~~~~~Y~~--sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 246 (353)
T PLN02896 169 TKASGWVYVL--SKLLTEEAAFKYAKENGIDLVSVITTTVAGPFLTPSVPSSIQVLLSPITGDSKLFSILSAVNSRMGSI 246 (353)
T ss_pred cCCCCccHHH--HHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCcCCCCCchHHHHHHHhcCCccccccccccccccCce
Confidence 12222 234455544 457999999999885543110 00000000 00 113
Q ss_pred CccCHHHHHHHHHHHhhCCCCCCcEEEEecCCcCHHHHHHHHHHhhh
Q 021928 255 GSLSKEDAAFICVEALESIPQTGLIFEVVNGEEKVSDWKKCFSRLME 301 (305)
Q Consensus 255 ~~Is~~DvA~~iv~~l~~~~~~~~~~~v~~g~~s~~d~~~~~~~l~~ 301 (305)
.+|+++|+|++++.+++.+... ..|++++.+.++.|+++.+.+..+
T Consensus 247 dfi~v~Dva~a~~~~l~~~~~~-~~~~~~~~~~s~~el~~~i~~~~~ 292 (353)
T PLN02896 247 ALVHIEDICDAHIFLMEQTKAE-GRYICCVDSYDMSELINHLSKEYP 292 (353)
T ss_pred eEEeHHHHHHHHHHHHhCCCcC-ccEEecCCCCCHHHHHHHHHHhCC
Confidence 6899999999999999865443 367665555799999999988765
|
|
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=2e-19 Score=181.79 Aligned_cols=204 Identities=13% Similarity=0.189 Sum_probs=145.4
Q ss_pred CEEEEEcCCChHHHHHHHHHH--hCCCeEEEEEcCcchh--hh---hcC-CCcEEeecCCCCH------HHHHHHhcCcc
Q 021928 99 DAVLVTDGDSDIGQMVILSLI--VKRTRIKALVKDKRNA--ME---SFG-TYVESMAGDASNK------KFLKTALRGVR 164 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~--~~g~~V~~~~R~~~~~--~~---~~~-~~v~~v~~D~~d~------~~~~~~~~~~d 164 (305)
|+|||||||||||++++++|+ ..|++|++++|+.... .. ... .+++++.+|+.|. +.+.++ +++|
T Consensus 1 m~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l-~~~D 79 (657)
T PRK07201 1 MRYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSLSRLEALAAYWGADRVVPLVGDLTEPGLGLSEADIAEL-GDID 79 (657)
T ss_pred CeEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchHHHHHHHHHhcCCCcEEEEecccCCccCCcCHHHHHHh-cCCC
Confidence 589999999999999999999 5899999999975331 11 112 4689999999983 455555 8999
Q ss_pred EEEECCcc-------------------hHhhhhhhcCCCEEEEEcccccccCCCCcc--------cccchHHHHHHHHHH
Q 021928 165 SIICPSEG-------------------FISNAGSLKGVQHVILLSQLSVYRGSGGIQ--------ALMKGNARKLAEQDE 217 (305)
Q Consensus 165 ~Vi~~~~g-------------------~~~~~a~~~gv~~~V~iSS~~~~~~~~~~~--------~~~~~~~~~~~~~aE 217 (305)
+|||+++. .+.+++++.++++||++||..++....... ......+...|..+|
T Consensus 80 ~Vih~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~~SS~~v~g~~~~~~~e~~~~~~~~~~~~Y~~sK~~~E 159 (657)
T PRK07201 80 HVVHLAAIYDLTADEEAQRAANVDGTRNVVELAERLQAATFHHVSSIAVAGDYEGVFREDDFDEGQGLPTPYHRTKFEAE 159 (657)
T ss_pred EEEECceeecCCCCHHHHHHHHhHHHHHHHHHHHhcCCCeEEEEeccccccCccCccccccchhhcCCCCchHHHHHHHH
Confidence 99998431 145567788899999999998875321110 000011233456778
Q ss_pred HHHH-hCCCCEEEEecCCcccCCCCCc--------------------c--e-eeecCCCCCCccCHHHHHHHHHHHhhCC
Q 021928 218 SMLM-ASGIPYTIIRTGVLQNTPGGKQ--------------------G--F-QFEEGCAANGSLSKEDAAFICVEALESI 273 (305)
Q Consensus 218 ~~l~-~~gi~~tilRPg~l~~~~~~~~--------------------~--~-~~~~~~~~~~~Is~~DvA~~iv~~l~~~ 273 (305)
++++ ..+++++++||+.+.+....+. . . .+..+.....+++++|+|++++.+++.+
T Consensus 160 ~~~~~~~g~~~~ilRp~~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~vddva~ai~~~~~~~ 239 (657)
T PRK07201 160 KLVREECGLPWRVYRPAVVVGDSRTGEMDKIDGPYYFFKVLAKLAKLPSWLPMVGPDGGRTNIVPVDYVADALDHLMHKD 239 (657)
T ss_pred HHHHHcCCCcEEEEcCCeeeecCCCCccccCCcHHHHHHHHHHhccCCcccccccCCCCeeeeeeHHHHHHHHHHHhcCc
Confidence 8887 4789999999999664321110 0 0 0011222356789999999999999877
Q ss_pred CCCCcEEEEecCC-cCHHHHHHHHHHhhhhc
Q 021928 274 PQTGLIFEVVNGE-EKVSDWKKCFSRLMEKT 303 (305)
Q Consensus 274 ~~~~~~~~v~~g~-~s~~d~~~~~~~l~~~~ 303 (305)
...+++||+++++ .++.|+++.+.+..+.+
T Consensus 240 ~~~g~~~ni~~~~~~s~~el~~~i~~~~g~~ 270 (657)
T PRK07201 240 GRDGQTFHLTDPKPQRVGDIYNAFARAAGAP 270 (657)
T ss_pred CCCCCEEEeCCCCCCcHHHHHHHHHHHhCCC
Confidence 6778999999865 58999999999988765
|
|
| >PRK05865 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.9e-19 Score=183.84 Aligned_cols=179 Identities=13% Similarity=0.145 Sum_probs=140.5
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEECCcc------
Q 021928 99 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG------ 172 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~g------ 172 (305)
|+|+||||+|+||++++++|+++|++|++++|+.... ...+++++.+|+.|.+++.++++++|+|||+++.
T Consensus 1 MkILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~---~~~~v~~v~gDL~D~~~l~~al~~vD~VVHlAa~~~~~~~ 77 (854)
T PRK05865 1 MRIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDS---WPSSADFIAADIRDATAVESAMTGADVVAHCAWVRGRNDH 77 (854)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchhh---cccCceEEEeeCCCHHHHHHHHhCCCEEEECCCcccchHH
Confidence 5899999999999999999999999999999975332 2335889999999999999999999999998431
Q ss_pred -------hHhhhhhhcCCCEEEEEcccccccCCCCcccccchHHHHHHHHHHHHHHhCCCCEEEEecCCcccCC-CC---
Q 021928 173 -------FISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMASGIPYTIIRTGVLQNTP-GG--- 241 (305)
Q Consensus 173 -------~~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~~~~~~aE~~l~~~gi~~tilRPg~l~~~~-~~--- 241 (305)
.+.+++++.++++||++||.. |..+|+++++.+++++++||+.+++.. ..
T Consensus 78 vNv~GT~nLLeAa~~~gvkr~V~iSS~~-------------------K~aaE~ll~~~gl~~vILRp~~VYGP~~~~~i~ 138 (854)
T PRK05865 78 INIDGTANVLKAMAETGTGRIVFTSSGH-------------------QPRVEQMLADCGLEWVAVRCALIFGRNVDNWVQ 138 (854)
T ss_pred HHHHHHHHHHHHHHHcCCCeEEEECCcH-------------------HHHHHHHHHHcCCCEEEEEeceEeCCChHHHHH
Confidence 145667888999999999863 345788888899999999999966432 10
Q ss_pred --CcceeeecC--CCCCCccCHHHHHHHHHHHhhCCCCCCcEEEEecCC-cCHHHHHHHHHHh
Q 021928 242 --KQGFQFEEG--CAANGSLSKEDAAFICVEALESIPQTGLIFEVVNGE-EKVSDWKKCFSRL 299 (305)
Q Consensus 242 --~~~~~~~~~--~~~~~~Is~~DvA~~iv~~l~~~~~~~~~~~v~~g~-~s~~d~~~~~~~l 299 (305)
.....+..+ ....++|+++|+|+++..+++.+...+.+||+++++ .+++++++.+.+.
T Consensus 139 ~ll~~~v~~~G~~~~~~dfIhVdDVA~Ai~~aL~~~~~~ggvyNIgsg~~~Si~EIae~l~~~ 201 (854)
T PRK05865 139 RLFALPVLPAGYADRVVQVVHSDDAQRLLVRALLDTVIDSGPVNLAAPGELTFRRIAAALGRP 201 (854)
T ss_pred HHhcCceeccCCCCceEeeeeHHHHHHHHHHHHhCCCcCCCeEEEECCCcccHHHHHHHHhhh
Confidence 011112222 233578999999999999997655556799999876 5899999988764
|
|
| >COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.9e-19 Score=163.83 Aligned_cols=200 Identities=20% Similarity=0.254 Sum_probs=145.1
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCc-cEEEECCc------
Q 021928 99 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGV-RSIICPSE------ 171 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~-d~Vi~~~~------ 171 (305)
|+||||||+||||++|+++|+++||+|++++|...+..... ..++++.+|++|.+.+.+++.++ |+|||+++
T Consensus 1 ~~ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~~~d~vih~aa~~~~~~ 79 (314)
T COG0451 1 MRILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL-SGVEFVVLDLTDRDLVDELAKGVPDAVIHLAAQSSVPD 79 (314)
T ss_pred CeEEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCccccccc-cccceeeecccchHHHHHHHhcCCCEEEEccccCchhh
Confidence 34999999999999999999999999999999876644333 56899999999998888899998 99998822
Q ss_pred c-------h----------HhhhhhhcCCCEEEEEcccccccCC-C---------CcccccchHHHHHHHHHHHHHHh--
Q 021928 172 G-------F----------ISNAGSLKGVQHVILLSQLSVYRGS-G---------GIQALMKGNARKLAEQDESMLMA-- 222 (305)
Q Consensus 172 g-------~----------~~~~a~~~gv~~~V~iSS~~~~~~~-~---------~~~~~~~~~~~~~~~~aE~~l~~-- 222 (305)
. . +.+++++.++++||+.||..++... . ...+... ....|..+|++++.
T Consensus 80 ~~~~~~~~~~~~nv~gt~~ll~aa~~~~~~~~v~~ss~~~~~~~~~~~~~~E~~~~~~p~~~--Yg~sK~~~E~~~~~~~ 157 (314)
T COG0451 80 SNASDPAEFLDVNVDGTLNLLEAARAAGVKRFVFASSVSVVYGDPPPLPIDEDLGPPRPLNP--YGVSKLAAEQLLRAYA 157 (314)
T ss_pred hhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCCCceECCCCCCCCcccccCCCCCCCH--HHHHHHHHHHHHHHHH
Confidence 1 1 3445667899999998887765532 1 1111111 22335556776654
Q ss_pred --CCCCEEEEecCCcccCCCCC-----------------cc-eee-ecCCCCCCccCHHHHHHHHHHHhhCCCCCCcEEE
Q 021928 223 --SGIPYTIIRTGVLQNTPGGK-----------------QG-FQF-EEGCAANGSLSKEDAAFICVEALESIPQTGLIFE 281 (305)
Q Consensus 223 --~gi~~tilRPg~l~~~~~~~-----------------~~-~~~-~~~~~~~~~Is~~DvA~~iv~~l~~~~~~~~~~~ 281 (305)
.+++++++||+.+++..... .. ..+ +.+.....+++++|+|++++.+++++... .||
T Consensus 158 ~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~--~~n 235 (314)
T COG0451 158 RLYGLPVVILRPFNVYGPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVDDVADALLLALENPDGG--VFN 235 (314)
T ss_pred HHhCCCeEEEeeeeeeCCCCCCCCCcCcHHHHHHHHHhCCCcceEeCCCceeEeeEeHHHHHHHHHHHHhCCCCc--EEE
Confidence 47999999999755322111 11 111 11122246899999999999999987665 999
Q ss_pred EecCC--cCHHHHHHHHHHhhhhc
Q 021928 282 VVNGE--EKVSDWKKCFSRLMEKT 303 (305)
Q Consensus 282 v~~g~--~s~~d~~~~~~~l~~~~ 303 (305)
++++. .+++++.+.+.+..+..
T Consensus 236 i~~~~~~~~~~e~~~~~~~~~~~~ 259 (314)
T COG0451 236 IGSGTAEITVRELAEAVAEAVGSK 259 (314)
T ss_pred eCCCCCcEEHHHHHHHHHHHhCCC
Confidence 99874 58999999999988764
|
|
| >TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.83 E-value=3.3e-19 Score=165.82 Aligned_cols=194 Identities=19% Similarity=0.280 Sum_probs=138.4
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCC--CeEEEEEcCcchhh---hhc-CCCcEEeecCCCCHHHHHHHhcCccEEEECCc
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRNAM---ESF-GTYVESMAGDASNKKFLKTALRGVRSIICPSE 171 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g--~~V~~~~R~~~~~~---~~~-~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~ 171 (305)
+|+||||||+|+||++++++|+++| ++|++++|+..+.. ... ..+++++.+|++|.+.+.++++++|+|||+++
T Consensus 4 ~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~~~~iD~Vih~Ag 83 (324)
T TIGR03589 4 NKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVRDKERLTRALRGVDYVVHAAA 83 (324)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHhcCCEEEECcc
Confidence 4899999999999999999999986 78999998765421 112 23688999999999999999999999999733
Q ss_pred c----------------------hHhhhhhhcCCCEEEEEcccccccCCCCcccccchHHHHHHHHHHHHH-------Hh
Q 021928 172 G----------------------FISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESML-------MA 222 (305)
Q Consensus 172 g----------------------~~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~~~~~~aE~~l-------~~ 222 (305)
. .+.+++.+.++++||++||.....+ ...|..+ |..+|.++ ..
T Consensus 84 ~~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~~~~~iV~~SS~~~~~p---~~~Y~~s-----K~~~E~l~~~~~~~~~~ 155 (324)
T TIGR03589 84 LKQVPAAEYNPFECIRTNINGAQNVIDAAIDNGVKRVVALSTDKAANP---INLYGAT-----KLASDKLFVAANNISGS 155 (324)
T ss_pred cCCCchhhcCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeCCCCCCC---CCHHHHH-----HHHHHHHHHHHHhhccc
Confidence 1 1345577788999999999765433 2233222 33344443 34
Q ss_pred CCCCEEEEecCCcccCCC-----------CCc-ceeeecCCCCCCccCHHHHHHHHHHHhhCCCCCCcEEEEecCCcCHH
Q 021928 223 SGIPYTIIRTGVLQNTPG-----------GKQ-GFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVVNGEEKVS 290 (305)
Q Consensus 223 ~gi~~tilRPg~l~~~~~-----------~~~-~~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~~~~~~~~v~~g~~s~~ 290 (305)
.+++++++|||.+.+... .+. .+.+..+.....+++++|+|++++.+++.. ..+++|+..+...++.
T Consensus 156 ~gi~~~~lR~g~v~G~~~~~i~~~~~~~~~~~~~~~i~~~~~~r~~i~v~D~a~a~~~al~~~-~~~~~~~~~~~~~sv~ 234 (324)
T TIGR03589 156 KGTRFSVVRYGNVVGSRGSVVPFFKSLKEEGVTELPITDPRMTRFWITLEQGVNFVLKSLERM-LGGEIFVPKIPSMKIT 234 (324)
T ss_pred cCcEEEEEeecceeCCCCCcHHHHHHHHHhCCCCeeeCCCCceEeeEEHHHHHHHHHHHHhhC-CCCCEEccCCCcEEHH
Confidence 689999999999764321 111 223333344467899999999999999864 3456774333346899
Q ss_pred HHHHHHHHhh
Q 021928 291 DWKKCFSRLM 300 (305)
Q Consensus 291 d~~~~~~~l~ 300 (305)
|+++.+.+..
T Consensus 235 el~~~i~~~~ 244 (324)
T TIGR03589 235 DLAEAMAPEC 244 (324)
T ss_pred HHHHHHHhhC
Confidence 9999988754
|
This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family. |
| >PLN02166 dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.83 E-value=4.3e-19 Score=171.18 Aligned_cols=198 Identities=16% Similarity=0.100 Sum_probs=138.1
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhh----hhc-CCCcEEeecCCCCHHHHHHHhcCccEEEECC
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM----ESF-GTYVESMAGDASNKKFLKTALRGVRSIICPS 170 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~----~~~-~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~ 170 (305)
.+.|+|+||||+||||++|+++|+++|++|++++|...... ... ..+++++.+|+.+. .+.++|+|||++
T Consensus 118 ~~~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~~~~~~~~~~~~~~~~~Di~~~-----~~~~~D~ViHlA 192 (436)
T PLN02166 118 RKRLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVHLFGNPRFELIRHDVVEP-----ILLEVDQIYHLA 192 (436)
T ss_pred cCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHhHhhhhccCCceEEEECccccc-----cccCCCEEEECc
Confidence 34589999999999999999999999999999988532211 111 13578888888763 356899999984
Q ss_pred cc----------------------hHhhhhhhcCCCEEEEEcccccccCCCC-------------cccccchHHHHHHHH
Q 021928 171 EG----------------------FISNAGSLKGVQHVILLSQLSVYRGSGG-------------IQALMKGNARKLAEQ 215 (305)
Q Consensus 171 ~g----------------------~~~~~a~~~gv~~~V~iSS~~~~~~~~~-------------~~~~~~~~~~~~~~~ 215 (305)
+. .+.++|++.++ +||++||..+|..... ..+...|. ..|..
T Consensus 193 a~~~~~~~~~~p~~~~~~Nv~gT~nLleaa~~~g~-r~V~~SS~~VYg~~~~~p~~E~~~~~~~p~~p~s~Yg--~SK~~ 269 (436)
T PLN02166 193 CPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYD--EGKRT 269 (436)
T ss_pred eeccchhhccCHHHHHHHHHHHHHHHHHHHHHhCC-EEEEECcHHHhCCCCCCCCCccccccCCCCCCCCchH--HHHHH
Confidence 20 14456777776 8999999998863211 11111122 22444
Q ss_pred HHHHHH----hCCCCEEEEecCCcccCC-C---------------CCcce-eeecCCCCCCccCHHHHHHHHHHHhhCCC
Q 021928 216 DESMLM----ASGIPYTIIRTGVLQNTP-G---------------GKQGF-QFEEGCAANGSLSKEDAAFICVEALESIP 274 (305)
Q Consensus 216 aE~~l~----~~gi~~tilRPg~l~~~~-~---------------~~~~~-~~~~~~~~~~~Is~~DvA~~iv~~l~~~~ 274 (305)
+|++++ ..+++++++||+.+++.. . .++.+ .++.+.....+|+++|+|++++.+++.+.
T Consensus 270 aE~~~~~y~~~~~l~~~ilR~~~vYGp~~~~~~~~~i~~~i~~~l~~~~i~v~g~g~~~rdfi~V~Dva~ai~~~~~~~~ 349 (436)
T PLN02166 270 AETLAMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQTIRKQPMTVYGDGKQTRSFQYVSDLVDGLVALMEGEH 349 (436)
T ss_pred HHHHHHHHHHHhCCCeEEEEEccccCCCCCCCccchHHHHHHHHhcCCCcEEeCCCCeEEeeEEHHHHHHHHHHHHhcCC
Confidence 565543 468999999998855421 0 11222 22344456789999999999999987542
Q ss_pred CCCcEEEEecCC-cCHHHHHHHHHHhhhhc
Q 021928 275 QTGLIFEVVNGE-EKVSDWKKCFSRLMEKT 303 (305)
Q Consensus 275 ~~~~~~~v~~g~-~s~~d~~~~~~~l~~~~ 303 (305)
+.+|||++++ .++.|+++.+.+.++.+
T Consensus 350 --~giyNIgs~~~~Si~ela~~I~~~~g~~ 377 (436)
T PLN02166 350 --VGPFNLGNPGEFTMLELAEVVKETIDSS 377 (436)
T ss_pred --CceEEeCCCCcEeHHHHHHHHHHHhCCC
Confidence 4599999865 69999999999998754
|
|
| >TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.83 E-value=9.7e-19 Score=160.45 Aligned_cols=200 Identities=15% Similarity=0.134 Sum_probs=139.3
Q ss_pred EEEEEcCCChHHHHHHHHHHhCC--CeEEEEEcCcc--h---hhhhc-CCCcEEeecCCCCHHHHHHHhcC--ccEEEEC
Q 021928 100 AVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKR--N---AMESF-GTYVESMAGDASNKKFLKTALRG--VRSIICP 169 (305)
Q Consensus 100 ~vlVtGatG~iG~~l~~~L~~~g--~~V~~~~R~~~--~---~~~~~-~~~v~~v~~D~~d~~~~~~~~~~--~d~Vi~~ 169 (305)
+|+||||||+||++++++|++.| ++|+++.|... . ..... ..+++++.+|+.|.+++.+++++ +|+|||+
T Consensus 1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~~ 80 (317)
T TIGR01181 1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLEDNPRYRFVKGDIGDRELVSRLFTEHQPDAVVHF 80 (317)
T ss_pred CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhccCCCcEEEEcCCcCHHHHHHHHhhcCCCEEEEc
Confidence 58999999999999999999987 78988876421 1 11111 23688999999999999999998 8999988
Q ss_pred Ccc----------------------hHhhhhhhcCCC-EEEEEcccccccCCCC---------cccccchHHHHHHHHHH
Q 021928 170 SEG----------------------FISNAGSLKGVQ-HVILLSQLSVYRGSGG---------IQALMKGNARKLAEQDE 217 (305)
Q Consensus 170 ~~g----------------------~~~~~a~~~gv~-~~V~iSS~~~~~~~~~---------~~~~~~~~~~~~~~~aE 217 (305)
++. .+.+++.+.+.+ ++|++||..+|..... ..+...|. ..|..+|
T Consensus 81 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~v~g~~~~~~~~~e~~~~~~~~~Y~--~sK~~~e 158 (317)
T TIGR01181 81 AAESHVDRSISGPAAFIETNVVGTYTLLEAVRKYWHEFRFHHISTDEVYGDLEKGDAFTETTPLAPSSPYS--ASKAASD 158 (317)
T ss_pred ccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCceEEEeeccceeCCCCCCCCcCCCCCCCCCCchH--HHHHHHH
Confidence 431 033445555433 8999999887653211 11111222 2233445
Q ss_pred HHH----HhCCCCEEEEecCCcccCCC--------------CCcce-eeecCCCCCCccCHHHHHHHHHHHhhCCCCCCc
Q 021928 218 SML----MASGIPYTIIRTGVLQNTPG--------------GKQGF-QFEEGCAANGSLSKEDAAFICVEALESIPQTGL 278 (305)
Q Consensus 218 ~~l----~~~gi~~tilRPg~l~~~~~--------------~~~~~-~~~~~~~~~~~Is~~DvA~~iv~~l~~~~~~~~ 278 (305)
.++ ++.+++++++||+.+.+... .+..+ .++.++....+++++|+|+++..++++. ..++
T Consensus 159 ~~~~~~~~~~~~~~~i~R~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~~~~~~~~~~-~~~~ 237 (317)
T TIGR01181 159 HLVRAYHRTYGLPALITRCSNNYGPYQFPEKLIPLMITNALAGKPLPVYGDGQQVRDWLYVEDHCRAIYLVLEKG-RVGE 237 (317)
T ss_pred HHHHHHHHHhCCCeEEEEeccccCCCCCcccHHHHHHHHHhcCCCceEeCCCceEEeeEEHHHHHHHHHHHHcCC-CCCc
Confidence 444 35789999999998553211 11111 2234445578999999999999999754 4568
Q ss_pred EEEEecCC-cCHHHHHHHHHHhhhh
Q 021928 279 IFEVVNGE-EKVSDWKKCFSRLMEK 302 (305)
Q Consensus 279 ~~~v~~g~-~s~~d~~~~~~~l~~~ 302 (305)
+|++++++ .++.|+++.+.+..+.
T Consensus 238 ~~~~~~~~~~s~~~~~~~i~~~~~~ 262 (317)
T TIGR01181 238 TYNIGGGNERTNLEVVETILELLGK 262 (317)
T ss_pred eEEeCCCCceeHHHHHHHHHHHhCC
Confidence 99999875 6899999999998875
|
This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor. |
| >PRK10675 UDP-galactose-4-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.2e-18 Score=162.24 Aligned_cols=203 Identities=20% Similarity=0.190 Sum_probs=139.6
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhh-------hhcCCCcEEeecCCCCHHHHHHHhc--CccEEEEC
Q 021928 99 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM-------ESFGTYVESMAGDASNKKFLKTALR--GVRSIICP 169 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~-------~~~~~~v~~v~~D~~d~~~~~~~~~--~~d~Vi~~ 169 (305)
|+|+||||+|+||++++++|+++|++|+++.|..+... ...+.++.++.+|+.|.+++.++++ ++|+|||+
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vvh~ 80 (338)
T PRK10675 1 MRVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALLTEILHDHAIDTVIHF 80 (338)
T ss_pred CeEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHhcCCCceEEEccCCCHHHHHHHHhcCCCCEEEEC
Confidence 58999999999999999999999999999876532211 1112357789999999999999886 58999987
Q ss_pred Ccc----------------------hHhhhhhhcCCCEEEEEcccccccCCCC--------c-ccccchHHHHHHHHHHH
Q 021928 170 SEG----------------------FISNAGSLKGVQHVILLSQLSVYRGSGG--------I-QALMKGNARKLAEQDES 218 (305)
Q Consensus 170 ~~g----------------------~~~~~a~~~gv~~~V~iSS~~~~~~~~~--------~-~~~~~~~~~~~~~~aE~ 218 (305)
++. .+.+++++.++++||++||.++|..... . .+...| ...|..+|+
T Consensus 81 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~yg~~~~~~~~E~~~~~~p~~~Y--~~sK~~~E~ 158 (338)
T PRK10675 81 AGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNLIFSSSATVYGDQPKIPYVESFPTGTPQSPY--GKSKLMVEQ 158 (338)
T ss_pred CccccccchhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhhCCCCCCccccccCCCCCCChh--HHHHHHHHH
Confidence 321 1345567789999999999988753211 0 112222 223445566
Q ss_pred HHHh-----CCCCEEEEecCCcccC-C-------C----------------CCc-ceee-e------cCCCCCCccCHHH
Q 021928 219 MLMA-----SGIPYTIIRTGVLQNT-P-------G----------------GKQ-GFQF-E------EGCAANGSLSKED 261 (305)
Q Consensus 219 ~l~~-----~gi~~tilRPg~l~~~-~-------~----------------~~~-~~~~-~------~~~~~~~~Is~~D 261 (305)
++++ .+++++++|++.+... + . ... .+.+ + .+....++|+++|
T Consensus 159 ~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~D 238 (338)
T PRK10675 159 ILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMD 238 (338)
T ss_pred HHHHHHHhcCCCcEEEEEeeeecCCCcccccccCCCCChhHHHHHHHHHHhcCCCceEEeCCcCCCCCCcEEEeeEEHHH
Confidence 5542 4789999997553221 0 0 000 0111 1 2233467899999
Q ss_pred HHHHHHHHhhCC--CCCCcEEEEecCC-cCHHHHHHHHHHhhhhc
Q 021928 262 AAFICVEALESI--PQTGLIFEVVNGE-EKVSDWKKCFSRLMEKT 303 (305)
Q Consensus 262 vA~~iv~~l~~~--~~~~~~~~v~~g~-~s~~d~~~~~~~l~~~~ 303 (305)
+|++++.+++.. ...+++||+++++ .++.|+++.+.+..+++
T Consensus 239 ~a~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~ 283 (338)
T PRK10675 239 LADGHVAAMEKLANKPGVHIYNLGAGVGSSVLDVVNAFSKACGKP 283 (338)
T ss_pred HHHHHHHHHHhhhccCCCceEEecCCCceeHHHHHHHHHHHhCCC
Confidence 999999998752 2345899999876 59999999999988764
|
|
| >PLN02206 UDP-glucuronate decarboxylase | Back alignment and domain information |
|---|
Probab=99.83 E-value=6.7e-19 Score=170.15 Aligned_cols=199 Identities=15% Similarity=0.091 Sum_probs=137.4
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh----hc-CCCcEEeecCCCCHHHHHHHhcCccEEEECCc
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME----SF-GTYVESMAGDASNKKFLKTALRGVRSIICPSE 171 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~----~~-~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~ 171 (305)
+.|+||||||+||||++|+++|+++|++|++++|......+ .+ ..+++++.+|+.+. ++.++|+|||+++
T Consensus 118 ~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~~~~~~~~~~~~~~i~~D~~~~-----~l~~~D~ViHlAa 192 (442)
T PLN02206 118 KGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKENVMHHFSNPNFELIRHDVVEP-----ILLEVDQIYHLAC 192 (442)
T ss_pred CCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccchhhhhhhccCCceEEEECCccCh-----hhcCCCEEEEeee
Confidence 45899999999999999999999999999999875322111 11 23578889998774 3568999998832
Q ss_pred c----------------------hHhhhhhhcCCCEEEEEcccccccCCCC-c---------cccc-chHHHHHHHHHHH
Q 021928 172 G----------------------FISNAGSLKGVQHVILLSQLSVYRGSGG-I---------QALM-KGNARKLAEQDES 218 (305)
Q Consensus 172 g----------------------~~~~~a~~~gv~~~V~iSS~~~~~~~~~-~---------~~~~-~~~~~~~~~~aE~ 218 (305)
. .+.++|++.++ +||++||..+|..... + .+.. ...+...|..+|+
T Consensus 193 ~~~~~~~~~~p~~~~~~Nv~gt~nLleaa~~~g~-r~V~~SS~~VYg~~~~~p~~E~~~~~~~P~~~~s~Y~~SK~~aE~ 271 (442)
T PLN02206 193 PASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKRTAET 271 (442)
T ss_pred ecchhhhhcCHHHHHHHHHHHHHHHHHHHHHhCC-EEEEECChHHhCCCCCCCCCccccccCCCCCccchHHHHHHHHHH
Confidence 0 14566777886 8999999998853211 0 0110 0112223445565
Q ss_pred HHH----hCCCCEEEEecCCcccCC----C------------CCcce-eeecCCCCCCccCHHHHHHHHHHHhhCCCCCC
Q 021928 219 MLM----ASGIPYTIIRTGVLQNTP----G------------GKQGF-QFEEGCAANGSLSKEDAAFICVEALESIPQTG 277 (305)
Q Consensus 219 ~l~----~~gi~~tilRPg~l~~~~----~------------~~~~~-~~~~~~~~~~~Is~~DvA~~iv~~l~~~~~~~ 277 (305)
++. ..+++++++||+.+++.. . .++.+ .++.++...++++++|+|++++.+++.+. +
T Consensus 272 ~~~~y~~~~g~~~~ilR~~~vyGp~~~~~~~~~v~~~i~~~l~~~~i~i~g~G~~~rdfi~V~Dva~ai~~a~e~~~--~ 349 (442)
T PLN02206 272 LTMDYHRGANVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEH--V 349 (442)
T ss_pred HHHHHHHHhCCCeEEEEeccccCCCCCccccchHHHHHHHHHcCCCcEEeCCCCEEEeEEeHHHHHHHHHHHHhcCC--C
Confidence 543 468999999998755321 0 11122 22344455689999999999999987542 4
Q ss_pred cEEEEecCC-cCHHHHHHHHHHhhhhc
Q 021928 278 LIFEVVNGE-EKVSDWKKCFSRLMEKT 303 (305)
Q Consensus 278 ~~~~v~~g~-~s~~d~~~~~~~l~~~~ 303 (305)
..||+++++ .++.|+++.+.+..+.+
T Consensus 350 g~yNIgs~~~~sl~Elae~i~~~~g~~ 376 (442)
T PLN02206 350 GPFNLGNPGEFTMLELAKVVQETIDPN 376 (442)
T ss_pred ceEEEcCCCceeHHHHHHHHHHHhCCC
Confidence 589999865 69999999999988643
|
|
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=99.82 E-value=8.2e-19 Score=177.96 Aligned_cols=204 Identities=18% Similarity=0.202 Sum_probs=145.1
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhC--CCeEEEEEcCc--chhhhh----cCCCcEEeecCCCCHHHHHHHh--cCccEE
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVK--RTRIKALVKDK--RNAMES----FGTYVESMAGDASNKKFLKTAL--RGVRSI 166 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~R~~--~~~~~~----~~~~v~~v~~D~~d~~~~~~~~--~~~d~V 166 (305)
.+|+||||||+||||++++++|+++ +++|++++|.. +..... ...+++++.+|+.|.+.+..++ .++|+|
T Consensus 5 ~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~D~V 84 (668)
T PLN02260 5 EPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNPSKSSPNFKFVKGDIASADLVNYLLITEGIDTI 84 (668)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhhhhhcccCCCeEEEECCCCChHHHHHHHhhcCCCEE
Confidence 3589999999999999999999988 68999988753 111111 1246899999999988887766 579999
Q ss_pred EECCcc----------------------hHhhhhhhcC-CCEEEEEcccccccCCCCc-----------ccccchHHHHH
Q 021928 167 ICPSEG----------------------FISNAGSLKG-VQHVILLSQLSVYRGSGGI-----------QALMKGNARKL 212 (305)
Q Consensus 167 i~~~~g----------------------~~~~~a~~~g-v~~~V~iSS~~~~~~~~~~-----------~~~~~~~~~~~ 212 (305)
||+++. .+.+++++.+ +++||++||..+|...... .+...| ...
T Consensus 85 iHlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~vkr~I~~SS~~vyg~~~~~~~~~~~E~~~~~p~~~Y--~~s 162 (668)
T PLN02260 85 MHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDADVGNHEASQLLPTNPY--SAT 162 (668)
T ss_pred EECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcchHHhCCCccccccCccccCCCCCCCCc--HHH
Confidence 998431 1345566666 8999999999888642210 111122 223
Q ss_pred HHHHHHHHH----hCCCCEEEEecCCcccCCC--------------CCcceee-ecCCCCCCccCHHHHHHHHHHHhhCC
Q 021928 213 AEQDESMLM----ASGIPYTIIRTGVLQNTPG--------------GKQGFQF-EEGCAANGSLSKEDAAFICVEALESI 273 (305)
Q Consensus 213 ~~~aE~~l~----~~gi~~tilRPg~l~~~~~--------------~~~~~~~-~~~~~~~~~Is~~DvA~~iv~~l~~~ 273 (305)
|..+|.+++ +.+++++++||+.+++... .+..+.+ +.+.....+|+++|+|+++..+++..
T Consensus 163 K~~aE~~v~~~~~~~~l~~vilR~~~VyGp~~~~~~~i~~~~~~a~~g~~i~i~g~g~~~r~~ihV~Dva~a~~~~l~~~ 242 (668)
T PLN02260 163 KAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMQGKPLPIHGDGSNVRSYLYCEDVAEAFEVVLHKG 242 (668)
T ss_pred HHHHHHHHHHHHHHcCCCEEEECcccccCcCCCcccHHHHHHHHHhCCCCeEEecCCCceEeeEEHHHHHHHHHHHHhcC
Confidence 555666664 4689999999998654321 1122222 33445578999999999999988754
Q ss_pred CCCCcEEEEecCC-cCHHHHHHHHHHhhhhc
Q 021928 274 PQTGLIFEVVNGE-EKVSDWKKCFSRLMEKT 303 (305)
Q Consensus 274 ~~~~~~~~v~~g~-~s~~d~~~~~~~l~~~~ 303 (305)
..+.+||+++++ .++.|+++.+.+..+.+
T Consensus 243 -~~~~vyni~~~~~~s~~el~~~i~~~~g~~ 272 (668)
T PLN02260 243 -EVGHVYNIGTKKERRVIDVAKDICKLFGLD 272 (668)
T ss_pred -CCCCEEEECCCCeeEHHHHHHHHHHHhCCC
Confidence 346899999865 58999999999988753
|
|
| >PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.7e-18 Score=159.20 Aligned_cols=187 Identities=18% Similarity=0.170 Sum_probs=128.6
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhc--CccEEEECCcc----
Q 021928 99 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--GVRSIICPSEG---- 172 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~--~~d~Vi~~~~g---- 172 (305)
|+||||||+||||++++++|+++| +|+++.|... .+.+|+.|.+.+.++++ ++|+|||+++.
T Consensus 1 m~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~~-----------~~~~Dl~d~~~~~~~~~~~~~D~Vih~Aa~~~~~ 68 (299)
T PRK09987 1 MNILLFGKTGQVGWELQRALAPLG-NLIALDVHST-----------DYCGDFSNPEGVAETVRKIRPDVIVNAAAHTAVD 68 (299)
T ss_pred CeEEEECCCCHHHHHHHHHhhccC-CEEEeccccc-----------cccCCCCCHHHHHHHHHhcCCCEEEECCccCCcc
Confidence 589999999999999999999999 7988887631 34689999999999998 47999998321
Q ss_pred ------------------hHhhhhhhcCCCEEEEEcccccccCCCC--------cccccchHHHHHHHHHHHHHHhCCCC
Q 021928 173 ------------------FISNAGSLKGVQHVILLSQLSVYRGSGG--------IQALMKGNARKLAEQDESMLMASGIP 226 (305)
Q Consensus 173 ------------------~~~~~a~~~gv~~~V~iSS~~~~~~~~~--------~~~~~~~~~~~~~~~aE~~l~~~gi~ 226 (305)
.+.+++++.++ +||++||..+|..... ..+... +...|..+|++++....+
T Consensus 69 ~~~~~~~~~~~~N~~~~~~l~~aa~~~g~-~~v~~Ss~~Vy~~~~~~p~~E~~~~~P~~~--Yg~sK~~~E~~~~~~~~~ 145 (299)
T PRK09987 69 KAESEPEFAQLLNATSVEAIAKAANEVGA-WVVHYSTDYVFPGTGDIPWQETDATAPLNV--YGETKLAGEKALQEHCAK 145 (299)
T ss_pred hhhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEccceEECCCCCCCcCCCCCCCCCCH--HHHHHHHHHHHHHHhCCC
Confidence 14456777786 7999999988854211 111112 223466789988887778
Q ss_pred EEEEecCCcccCCC------------CCcceee-ec--CCCCCCccCHHHHHHHHHHHhhCCCCCCcEEEEecCC-cCHH
Q 021928 227 YTIIRTGVLQNTPG------------GKQGFQF-EE--GCAANGSLSKEDAAFICVEALESIPQTGLIFEVVNGE-EKVS 290 (305)
Q Consensus 227 ~tilRPg~l~~~~~------------~~~~~~~-~~--~~~~~~~Is~~DvA~~iv~~l~~~~~~~~~~~v~~g~-~s~~ 290 (305)
++++||+++++... .++.+.+ +. +.........+|+++++..++..+.. +.+||+++++ .++.
T Consensus 146 ~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~v~~d~~g~~~~~~~~~d~~~~~~~~~~~~~~~-~giyni~~~~~~s~~ 224 (299)
T PRK09987 146 HLIFRTSWVYAGKGNNFAKTMLRLAKEREELSVINDQFGAPTGAELLADCTAHAIRVALNKPEV-AGLYHLVASGTTTWH 224 (299)
T ss_pred EEEEecceecCCCCCCHHHHHHHHHhcCCCeEEeCCCcCCCCCHHHHHHHHHHHHHHhhccCCC-CCeEEeeCCCCccHH
Confidence 99999999664321 1112222 11 11111223346677777766654433 3599999866 6899
Q ss_pred HHHHHHHHhhh
Q 021928 291 DWKKCFSRLME 301 (305)
Q Consensus 291 d~~~~~~~l~~ 301 (305)
|+++.+.++.+
T Consensus 225 e~~~~i~~~~~ 235 (299)
T PRK09987 225 DYAALVFEEAR 235 (299)
T ss_pred HHHHHHHHHHH
Confidence 99998877654
|
|
| >PLN02240 UDP-glucose 4-epimerase | Back alignment and domain information |
|---|
Probab=99.81 E-value=3.6e-18 Score=159.85 Aligned_cols=205 Identities=16% Similarity=0.166 Sum_probs=142.0
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchh-------hhh---cCCCcEEeecCCCCHHHHHHHhc--Ccc
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-------MES---FGTYVESMAGDASNKKFLKTALR--GVR 164 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~-------~~~---~~~~v~~v~~D~~d~~~~~~~~~--~~d 164 (305)
++++|+||||+|+||++++++|+++|++|++++|..... ... ...+++++.+|+.|.+.+.++++ ++|
T Consensus 4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~~d 83 (352)
T PLN02240 4 MGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFASTRFD 83 (352)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHhCCCC
Confidence 458999999999999999999999999999998753211 111 12468899999999999998886 689
Q ss_pred EEEECCcc----------------------hHhhhhhhcCCCEEEEEcccccccCCCC--------cccccchHHHHHHH
Q 021928 165 SIICPSEG----------------------FISNAGSLKGVQHVILLSQLSVYRGSGG--------IQALMKGNARKLAE 214 (305)
Q Consensus 165 ~Vi~~~~g----------------------~~~~~a~~~gv~~~V~iSS~~~~~~~~~--------~~~~~~~~~~~~~~ 214 (305)
.|||+++. .+.+++++.++++||++||..+|..... ..+...| ...|.
T Consensus 84 ~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~~~~~~~~~Y--~~sK~ 161 (352)
T PLN02240 84 AVIHFAGLKAVGESVAKPLLYYDNNLVGTINLLEVMAKHGCKKLVFSSSATVYGQPEEVPCTEEFPLSATNPY--GRTKL 161 (352)
T ss_pred EEEEccccCCccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHhCCCCCCCCCCCCCCCCCCHH--HHHHH
Confidence 99998321 1345567788999999999887753211 1111222 22345
Q ss_pred HHHHHHHh-----CCCCEEEEecCCcccC---------CCC--------------Cc--ceee-e------cCCCCCCcc
Q 021928 215 QDESMLMA-----SGIPYTIIRTGVLQNT---------PGG--------------KQ--GFQF-E------EGCAANGSL 257 (305)
Q Consensus 215 ~aE~~l~~-----~gi~~tilRPg~l~~~---------~~~--------------~~--~~~~-~------~~~~~~~~I 257 (305)
.+|.+++. .+++++++|++.+.+. +.. ++ .+.+ + .+.....+|
T Consensus 162 ~~e~~~~~~~~~~~~~~~~~~R~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i 241 (352)
T PLN02240 162 FIEEICRDIHASDPEWKIILLRYFNPVGAHPSGRIGEDPKGIPNNLMPYVQQVAVGRRPELTVFGNDYPTKDGTGVRDYI 241 (352)
T ss_pred HHHHHHHHHHHhcCCCCEEEEeecCcCCCCccccccCCCCCCcchHHHHHHHHHhCCCCceEEeCCCCCCCCCCEEEeeE
Confidence 56766642 4688999997543221 100 00 1111 1 223446789
Q ss_pred CHHHHHHHHHHHhhCC----CCCCcEEEEecCC-cCHHHHHHHHHHhhhhc
Q 021928 258 SKEDAAFICVEALESI----PQTGLIFEVVNGE-EKVSDWKKCFSRLMEKT 303 (305)
Q Consensus 258 s~~DvA~~iv~~l~~~----~~~~~~~~v~~g~-~s~~d~~~~~~~l~~~~ 303 (305)
+++|+|++++.++... ...+++||+++++ .+++|+++.+.++++.+
T Consensus 242 ~v~D~a~a~~~a~~~~~~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~~ 292 (352)
T PLN02240 242 HVMDLADGHIAALRKLFTDPDIGCEAYNLGTGKGTSVLEMVAAFEKASGKK 292 (352)
T ss_pred EHHHHHHHHHHHHhhhhhccCCCCceEEccCCCcEeHHHHHHHHHHHhCCC
Confidence 9999999999888642 3446899999876 59999999999988754
|
|
| >PLN02653 GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.81 E-value=2.6e-18 Score=160.42 Aligned_cols=202 Identities=12% Similarity=-0.012 Sum_probs=139.8
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcch-----hhhh------cCCCcEEeecCCCCHHHHHHHhcC--c
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-----AMES------FGTYVESMAGDASNKKFLKTALRG--V 163 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~-----~~~~------~~~~v~~v~~D~~d~~~~~~~~~~--~ 163 (305)
++|+||||||+||||++++++|+++|++|+++.|++.. .... .+.+++++.+|+.|.+++.++++. +
T Consensus 5 ~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 84 (340)
T PLN02653 5 PRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDDIKP 84 (340)
T ss_pred CCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHHcCC
Confidence 45899999999999999999999999999999987542 1111 123588999999999999999885 5
Q ss_pred cEEEECCcc----------------------hHhhhhhhcCCC-----EEEEEcccccccCCCC-------cccccchHH
Q 021928 164 RSIICPSEG----------------------FISNAGSLKGVQ-----HVILLSQLSVYRGSGG-------IQALMKGNA 209 (305)
Q Consensus 164 d~Vi~~~~g----------------------~~~~~a~~~gv~-----~~V~iSS~~~~~~~~~-------~~~~~~~~~ 209 (305)
|+|||+++. .+.+++++.+++ +||++||..+|..... ..+...|..
T Consensus 85 d~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~E~~~~~p~~~Y~~ 164 (340)
T PLN02653 85 DEVYNLAAQSHVAVSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGSSEMYGSTPPPQSETTPFHPRSPYAV 164 (340)
T ss_pred CEEEECCcccchhhhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEeccHHHhCCCCCCCCCCCCCCCCChhHH
Confidence 999998431 033455666665 8999999888864221 111122222
Q ss_pred HHHHHHHHHHHH----hCCCCEEEEecCC-cccCCC----------------CCcc--eeeecCCCCCCccCHHHHHHHH
Q 021928 210 RKLAEQDESMLM----ASGIPYTIIRTGV-LQNTPG----------------GKQG--FQFEEGCAANGSLSKEDAAFIC 266 (305)
Q Consensus 210 ~~~~~~aE~~l~----~~gi~~tilRPg~-l~~~~~----------------~~~~--~~~~~~~~~~~~Is~~DvA~~i 266 (305)
.|..+|.+++ +.++.++..|+.. +.+... .+.. ...+.++....+++++|+|+++
T Consensus 165 --sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v~D~a~a~ 242 (340)
T PLN02653 165 --AKVAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRAVGRIKVGLQKKLFLGNLDASRDWGFAGDYVEAM 242 (340)
T ss_pred --HHHHHHHHHHHHHHHcCCeEEEeeeccccCCCCCcccchhHHHHHHHHHHcCCCCceEeCCCcceecceeHHHHHHHH
Confidence 2444555543 4577766666533 211110 1111 1224456668899999999999
Q ss_pred HHHhhCCCCCCcEEEEecCC-cCHHHHHHHHHHhhhh
Q 021928 267 VEALESIPQTGLIFEVVNGE-EKVSDWKKCFSRLMEK 302 (305)
Q Consensus 267 v~~l~~~~~~~~~~~v~~g~-~s~~d~~~~~~~l~~~ 302 (305)
+.+++... +..||+++++ .++.|+++.+.++.+.
T Consensus 243 ~~~~~~~~--~~~yni~~g~~~s~~e~~~~i~~~~g~ 277 (340)
T PLN02653 243 WLMLQQEK--PDDYVVATEESHTVEEFLEEAFGYVGL 277 (340)
T ss_pred HHHHhcCC--CCcEEecCCCceeHHHHHHHHHHHcCC
Confidence 99998643 4689999876 5899999999998875
|
|
| >PRK10084 dTDP-glucose 4,6 dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=4.5e-18 Score=159.34 Aligned_cols=201 Identities=13% Similarity=0.102 Sum_probs=137.2
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCCe-EEEEEcCc--ch---hhhhc-CCCcEEeecCCCCHHHHHHHhcC--ccEEEEC
Q 021928 99 DAVLVTDGDSDIGQMVILSLIVKRTR-IKALVKDK--RN---AMESF-GTYVESMAGDASNKKFLKTALRG--VRSIICP 169 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~~~g~~-V~~~~R~~--~~---~~~~~-~~~v~~v~~D~~d~~~~~~~~~~--~d~Vi~~ 169 (305)
|+||||||+||||++++++|+++|++ |+.+.+.. .. ..... ..+++++.+|+.|.+++.+++++ +|+|||+
T Consensus 1 mkilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~ 80 (352)
T PRK10084 1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSDSERYVFEHADICDRAELDRIFAQHQPDAVMHL 80 (352)
T ss_pred CeEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHHHHhcccCCceEEEEecCCCHHHHHHHHHhcCCCEEEEC
Confidence 58999999999999999999999986 44444432 11 11111 23578899999999999999974 7999998
Q ss_pred Ccc----------------------hHhhhhhhc---------CCCEEEEEcccccccCCC------------------C
Q 021928 170 SEG----------------------FISNAGSLK---------GVQHVILLSQLSVYRGSG------------------G 200 (305)
Q Consensus 170 ~~g----------------------~~~~~a~~~---------gv~~~V~iSS~~~~~~~~------------------~ 200 (305)
++. .+.+++.+. ++++||++||..+|.... .
T Consensus 81 A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~E~~~ 160 (352)
T PRK10084 81 AAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDEVENSEELPLFTETTA 160 (352)
T ss_pred CcccCCcchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCccccccccccCCCccccCC
Confidence 431 033344432 567999999988775310 0
Q ss_pred cccccchHHHHHHHHHHHHH----HhCCCCEEEEecCCcccCCC--------------CCccee-eecCCCCCCccCHHH
Q 021928 201 IQALMKGNARKLAEQDESML----MASGIPYTIIRTGVLQNTPG--------------GKQGFQ-FEEGCAANGSLSKED 261 (305)
Q Consensus 201 ~~~~~~~~~~~~~~~aE~~l----~~~gi~~tilRPg~l~~~~~--------------~~~~~~-~~~~~~~~~~Is~~D 261 (305)
..+...|. ..|..+|.++ +..+++++++||+.+.+... .+..+. ++.++...++++++|
T Consensus 161 ~~p~~~Y~--~sK~~~E~~~~~~~~~~g~~~vilr~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~D 238 (352)
T PRK10084 161 YAPSSPYS--ASKASSDHLVRAWLRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVED 238 (352)
T ss_pred CCCCChhH--HHHHHHHHHHHHHHHHhCCCEEEEeccceeCCCcCccchHHHHHHHHhcCCCeEEeCCCCeEEeeEEHHH
Confidence 11122222 2244455544 34689999999988553221 111222 244566688999999
Q ss_pred HHHHHHHHhhCCCCCCcEEEEecCC-cCHHHHHHHHHHhhhh
Q 021928 262 AAFICVEALESIPQTGLIFEVVNGE-EKVSDWKKCFSRLMEK 302 (305)
Q Consensus 262 vA~~iv~~l~~~~~~~~~~~v~~g~-~s~~d~~~~~~~l~~~ 302 (305)
+|+++..+++.+ ..+++||+++++ .++.++++.+.+.+++
T Consensus 239 ~a~a~~~~l~~~-~~~~~yni~~~~~~s~~~~~~~i~~~~~~ 279 (352)
T PRK10084 239 HARALYKVVTEG-KAGETYNIGGHNEKKNLDVVLTICDLLDE 279 (352)
T ss_pred HHHHHHHHHhcC-CCCceEEeCCCCcCcHHHHHHHHHHHhcc
Confidence 999999998754 347899999876 4889999998888764
|
|
| >COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.80 E-value=5.5e-18 Score=150.90 Aligned_cols=203 Identities=17% Similarity=0.136 Sum_probs=150.1
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCC--eEEEEEcCc-----chhhhhcC-CCcEEeecCCCCHHHHHHHhc--CccEEEE
Q 021928 99 DAVLVTDGDSDIGQMVILSLIVKRT--RIKALVKDK-----RNAMESFG-TYVESMAGDASNKKFLKTALR--GVRSIIC 168 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~R~~-----~~~~~~~~-~~v~~v~~D~~d~~~~~~~~~--~~d~Vi~ 168 (305)
|++|||||+||||+.+++.++++.. +|+.+++-. +....... ++..++++|+.|.+.+.++++ ..|+|+|
T Consensus 1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~~~~~~~~fv~~DI~D~~~v~~~~~~~~~D~Vvh 80 (340)
T COG1088 1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVEDSPRYRFVQGDICDRELVDRLFKEYQPDAVVH 80 (340)
T ss_pred CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHhhhcCCCceEEeccccCHHHHHHHHHhcCCCeEEE
Confidence 6899999999999999999998875 456655421 22222223 489999999999999999998 5899997
Q ss_pred CCcc----------------------hHhhhhhhcCC-CEEEEEcccccccCC-------------CCcccccchHHHHH
Q 021928 169 PSEG----------------------FISNAGSLKGV-QHVILLSQLSVYRGS-------------GGIQALMKGNARKL 212 (305)
Q Consensus 169 ~~~g----------------------~~~~~a~~~gv-~~~V~iSS~~~~~~~-------------~~~~~~~~~~~~~~ 212 (305)
.++. .+++++++... .||+++|+.-+|+.. .+..+|.++++...
T Consensus 81 fAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~frf~HISTDEVYG~l~~~~~~FtE~tp~~PsSPYSASKAasD 160 (340)
T COG1088 81 FAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGKFRFHHISTDEVYGDLGLDDDAFTETTPYNPSSPYSASKAASD 160 (340)
T ss_pred echhccccccccChhhhhhcchHHHHHHHHHHHHhcccceEEEeccccccccccCCCCCcccCCCCCCCCCcchhhhhHH
Confidence 6331 15677777765 499999999888631 22344554444333
Q ss_pred HHHHHHHHHhCCCCEEEEecCC-cccCC--C------------CCcceeeecCCCCCCccCHHHHHHHHHHHhhCCCCCC
Q 021928 213 AEQDESMLMASGIPYTIIRTGV-LQNTP--G------------GKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTG 277 (305)
Q Consensus 213 ~~~aE~~l~~~gi~~tilRPg~-l~~~~--~------------~~~~~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~~~~ 277 (305)
. ....+.+..|++++|.|++. +.+.. . +.+.-.++.|.....|++++|-++++-..+++... |
T Consensus 161 ~-lVray~~TYglp~~ItrcSNNYGPyqfpEKlIP~~I~nal~g~~lpvYGdG~~iRDWl~VeDh~~ai~~Vl~kg~~-G 238 (340)
T COG1088 161 L-LVRAYVRTYGLPATITRCSNNYGPYQFPEKLIPLMIINALLGKPLPVYGDGLQIRDWLYVEDHCRAIDLVLTKGKI-G 238 (340)
T ss_pred H-HHHHHHHHcCCceEEecCCCCcCCCcCchhhhHHHHHHHHcCCCCceecCCcceeeeEEeHhHHHHHHHHHhcCcC-C
Confidence 3 34456678999999999988 43321 1 22334457777889999999999999999986554 9
Q ss_pred cEEEEecCCc-CHHHHHHHHHHhhhhc
Q 021928 278 LIFEVVNGEE-KVSDWKKCFSRLMEKT 303 (305)
Q Consensus 278 ~~~~v~~g~~-s~~d~~~~~~~l~~~~ 303 (305)
++|||.++.+ +-.++++.+.+++++.
T Consensus 239 E~YNIgg~~E~~Nlevv~~i~~~l~~~ 265 (340)
T COG1088 239 ETYNIGGGNERTNLEVVKTICELLGKD 265 (340)
T ss_pred ceEEeCCCccchHHHHHHHHHHHhCcc
Confidence 9999998764 7889999999998863
|
|
| >TIGR01179 galE UDP-glucose-4-epimerase | Back alignment and domain information |
|---|
Probab=99.80 E-value=6.9e-18 Score=155.34 Aligned_cols=202 Identities=19% Similarity=0.253 Sum_probs=139.0
Q ss_pred EEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcC-----CCcEEeecCCCCHHHHHHHhc--CccEEEECCcc
Q 021928 100 AVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG-----TYVESMAGDASNKKFLKTALR--GVRSIICPSEG 172 (305)
Q Consensus 100 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~-----~~v~~v~~D~~d~~~~~~~~~--~~d~Vi~~~~g 172 (305)
+||||||+|+||++++++|+++|++|+++.|.......... .+++++.+|+.+.+++.++++ ++|+|||+++.
T Consensus 1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vv~~ag~ 80 (328)
T TIGR01179 1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRGERITRVTFVEGDLRDRELLDRLFEEHKIDAVIHFAGL 80 (328)
T ss_pred CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhhccccceEEEECCCCCHHHHHHHHHhCCCcEEEECccc
Confidence 58999999999999999999999999987654322111111 147788999999999999886 68999988431
Q ss_pred ----------------------hHhhhhhhcCCCEEEEEcccccccCCCC--------cccccchHHHHHHHHHHHHHH-
Q 021928 173 ----------------------FISNAGSLKGVQHVILLSQLSVYRGSGG--------IQALMKGNARKLAEQDESMLM- 221 (305)
Q Consensus 173 ----------------------~~~~~a~~~gv~~~V~iSS~~~~~~~~~--------~~~~~~~~~~~~~~~aE~~l~- 221 (305)
.+.+++.+.++++||++||..+|..... ..+...|. ..|..+|.+++
T Consensus 81 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~ss~~~~g~~~~~~~~e~~~~~~~~~y~--~sK~~~e~~~~~ 158 (328)
T TIGR01179 81 IAVGESVQDPLKYYRNNVVNTLNLLEAMQQTGVKKFIFSSSAAVYGEPSSIPISEDSPLGPINPYG--RSKLMSERILRD 158 (328)
T ss_pred cCcchhhcCchhhhhhhHHHHHHHHHHHHhcCCCEEEEecchhhcCCCCCCCccccCCCCCCCchH--HHHHHHHHHHHH
Confidence 1334566778899999999877753211 11112222 22344555544
Q ss_pred ---h-CCCCEEEEecCCcccCCC------------------------CCcceee-------ecCCCCCCccCHHHHHHHH
Q 021928 222 ---A-SGIPYTIIRTGVLQNTPG------------------------GKQGFQF-------EEGCAANGSLSKEDAAFIC 266 (305)
Q Consensus 222 ---~-~gi~~tilRPg~l~~~~~------------------------~~~~~~~-------~~~~~~~~~Is~~DvA~~i 266 (305)
+ .+++++++||+.+.+... ....+.. ..+.....+|+++|+|+++
T Consensus 159 ~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~D~a~~~ 238 (328)
T TIGR01179 159 LSKADPGLSYVILRYFNVAGADPEGTIGEDPPGITHLIPYACQVAVGKRDKLTIFGTDYPTPDGTCVRDYIHVMDLADAH 238 (328)
T ss_pred HHHhccCCCEEEEecCcccCCCCCCccccCCcccchHHHHHHHHHHhCCCCeEEeCCcccCCCCceEEeeeeHHHHHHHH
Confidence 3 789999999977543211 0010111 1122335789999999999
Q ss_pred HHHhhCC--CCCCcEEEEecCC-cCHHHHHHHHHHhhhhc
Q 021928 267 VEALESI--PQTGLIFEVVNGE-EKVSDWKKCFSRLMEKT 303 (305)
Q Consensus 267 v~~l~~~--~~~~~~~~v~~g~-~s~~d~~~~~~~l~~~~ 303 (305)
+.++... ...+++||+++++ .++.|+.+.+.++.+++
T Consensus 239 ~~~~~~~~~~~~~~~~n~~~~~~~s~~ei~~~~~~~~g~~ 278 (328)
T TIGR01179 239 LAALEYLLNGGESHVYNLGYGQGFSVLEVIEAFKKVSGVD 278 (328)
T ss_pred HHHHhhhhcCCCcceEEcCCCCcccHHHHHHHHHHHhCCC
Confidence 9998753 2456899998865 69999999999998765
|
This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately. |
| >PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=2.9e-18 Score=157.82 Aligned_cols=193 Identities=13% Similarity=0.054 Sum_probs=127.4
Q ss_pred EEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCH---HH-HHHHhc-----CccEEEECCc
Q 021928 101 VLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNK---KF-LKTALR-----GVRSIICPSE 171 (305)
Q Consensus 101 vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~---~~-~~~~~~-----~~d~Vi~~~~ 171 (305)
||||||+||||++|+++|+++|++++++.|+....... ..+..+|+.|. +. +.+++. ++|+|||+++
T Consensus 2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~~~----~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~Vih~A~ 77 (308)
T PRK11150 2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKF----VNLVDLDIADYMDKEDFLAQIMAGDDFGDIEAIFHEGA 77 (308)
T ss_pred EEEecCCcHHHHHHHHHHHhCCCceEEEecCCCcchHH----HhhhhhhhhhhhhHHHHHHHHhcccccCCccEEEECce
Confidence 89999999999999999999999888887765322110 12234555543 33 334442 6899999742
Q ss_pred c--------------------hHhhhhhhcCCCEEEEEcccccccCCCC--------cccccchHHHHHHHHHHHHHH--
Q 021928 172 G--------------------FISNAGSLKGVQHVILLSQLSVYRGSGG--------IQALMKGNARKLAEQDESMLM-- 221 (305)
Q Consensus 172 g--------------------~~~~~a~~~gv~~~V~iSS~~~~~~~~~--------~~~~~~~~~~~~~~~aE~~l~-- 221 (305)
. .+.++|++.++ +||++||..+|..... ..+...|.. .|..+|++++
T Consensus 78 ~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~-~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~--sK~~~E~~~~~~ 154 (308)
T PRK11150 78 CSSTTEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAATYGGRTDDFIEEREYEKPLNVYGY--SKFLFDEYVRQI 154 (308)
T ss_pred ecCCcCCChHHHHHHHHHHHHHHHHHHHHcCC-cEEEEcchHHhCcCCCCCCccCCCCCCCCHHHH--HHHHHHHHHHHH
Confidence 0 14566777887 6999999988864221 111222222 2334555444
Q ss_pred --hCCCCEEEEecCCcccCCC---C---------------Ccceeee--cCCCCCCccCHHHHHHHHHHHhhCCCCCCcE
Q 021928 222 --ASGIPYTIIRTGVLQNTPG---G---------------KQGFQFE--EGCAANGSLSKEDAAFICVEALESIPQTGLI 279 (305)
Q Consensus 222 --~~gi~~tilRPg~l~~~~~---~---------------~~~~~~~--~~~~~~~~Is~~DvA~~iv~~l~~~~~~~~~ 279 (305)
+.+++++++||+.+.+... . +....+. .+....++++++|+|++++.+++... +.+
T Consensus 155 ~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~r~~i~v~D~a~a~~~~~~~~~--~~~ 232 (308)
T PRK11150 155 LPEANSQICGFRYFNVYGPREGHKGSMASVAFHLNNQLNNGENPKLFEGSENFKRDFVYVGDVAAVNLWFWENGV--SGI 232 (308)
T ss_pred HHHcCCCEEEEeeeeecCCCCCCCCccchhHHHHHHHHhcCCCCEEecCCCceeeeeeeHHHHHHHHHHHHhcCC--CCe
Confidence 4689999999988554221 0 0011111 12234678999999999999987643 469
Q ss_pred EEEecCC-cCHHHHHHHHHHhhhh
Q 021928 280 FEVVNGE-EKVSDWKKCFSRLMEK 302 (305)
Q Consensus 280 ~~v~~g~-~s~~d~~~~~~~l~~~ 302 (305)
||++++. .++.|+++.+.++.+.
T Consensus 233 yni~~~~~~s~~el~~~i~~~~~~ 256 (308)
T PRK11150 233 FNCGTGRAESFQAVADAVLAYHKK 256 (308)
T ss_pred EEcCCCCceeHHHHHHHHHHHhCC
Confidence 9999876 5999999999998763
|
|
| >COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.80 E-value=8.6e-18 Score=151.23 Aligned_cols=198 Identities=23% Similarity=0.294 Sum_probs=153.8
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEECCc-----c-
Q 021928 99 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE-----G- 172 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~-----g- 172 (305)
|+||||||||++|++++++|+++|++|++++|++++..... ..++++.+|+.+..++..+++|++.++++.+ .
T Consensus 1 ~~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~-~~v~~~~~d~~~~~~l~~a~~G~~~~~~i~~~~~~~~~ 79 (275)
T COG0702 1 MKILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALA-GGVEVVLGDLRDPKSLVAGAKGVDGVLLISGLLDGSDA 79 (275)
T ss_pred CeEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhhc-CCcEEEEeccCCHhHHHHHhccccEEEEEecccccccc
Confidence 68999999999999999999999999999999998876666 7899999999999999999999999987722 0
Q ss_pred h-------Hhhhhhhc--CCCEEEEEcccccccCCCCcccccchHHHHHHHHHHHHHHhCCCCEEEEecCCc-ccCCCC-
Q 021928 173 F-------ISNAGSLK--GVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMASGIPYTIIRTGVL-QNTPGG- 241 (305)
Q Consensus 173 ~-------~~~~a~~~--gv~~~V~iSS~~~~~~~~~~~~~~~~~~~~~~~~aE~~l~~~gi~~tilRPg~l-~~~~~~- 241 (305)
. ....++.. ++++++++|...+...+. .. ....+...|..+.+++++|+++||..+ .+....
T Consensus 80 ~~~~~~~~~~~~a~~a~~~~~~~~~~s~~~~~~~~~--~~-----~~~~~~~~e~~l~~sg~~~t~lr~~~~~~~~~~~~ 152 (275)
T COG0702 80 FRAVQVTAVVRAAEAAGAGVKHGVSLSVLGADAASP--SA-----LARAKAAVEAALRSSGIPYTTLRRAAFYLGAGAAF 152 (275)
T ss_pred hhHHHHHHHHHHHHHhcCCceEEEEeccCCCCCCCc--cH-----HHHHHHHHHHHHHhcCCCeEEEecCeeeeccchhH
Confidence 1 23344554 488999999887754221 11 233466789999999999999996664 432211
Q ss_pred ------CcceeeecCCCCCCccCHHHHHHHHHHHhhCCCCCCcEEEEecCC-cCHHHHHHHHHHhhhhcC
Q 021928 242 ------KQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVVNGE-EKVSDWKKCFSRLMEKTG 304 (305)
Q Consensus 242 ------~~~~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~~~~~~~~v~~g~-~s~~d~~~~~~~l~~~~~ 304 (305)
........+....+.+..+|++.++...+..+...+++|++.+.+ .+..+..+.+....+++.
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~i~~~d~a~~~~~~l~~~~~~~~~~~l~g~~~~~~~~~~~~l~~~~gr~~ 222 (275)
T COG0702 153 IEAAEAAGLPVIPRGIGRLSPIAVDDVAEALAAALDAPATAGRTYELAGPEALTLAELASGLDYTIGRPV 222 (275)
T ss_pred HHHHHhhCCceecCCCCceeeeEHHHHHHHHHHHhcCCcccCcEEEccCCceecHHHHHHHHHHHhCCcc
Confidence 011112223335678999999999999999888889999999864 588999999999888764
|
|
| >TIGR01746 Thioester-redct thioester reductase domain | Back alignment and domain information |
|---|
Probab=99.79 E-value=8.4e-18 Score=156.99 Aligned_cols=200 Identities=17% Similarity=0.193 Sum_probs=138.1
Q ss_pred EEEEEcCCChHHHHHHHHHHhCC--CeEEEEEcCcchh------hhhc----------C-CCcEEeecCCCC------HH
Q 021928 100 AVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRNA------MESF----------G-TYVESMAGDASN------KK 154 (305)
Q Consensus 100 ~vlVtGatG~iG~~l~~~L~~~g--~~V~~~~R~~~~~------~~~~----------~-~~v~~v~~D~~d------~~ 154 (305)
+|+||||||+||++++++|+++| ++|++++|+.+.. .+.+ . .+++++.+|+++ .+
T Consensus 1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~ 80 (367)
T TIGR01746 1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA 80 (367)
T ss_pred CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence 58999999999999999999999 6799999986521 1100 1 468999999875 35
Q ss_pred HHHHHhcCccEEEECCcc-------------------hHhhhhhhcCCCEEEEEcccccccCCCCc-------------c
Q 021928 155 FLKTALRGVRSIICPSEG-------------------FISNAGSLKGVQHVILLSQLSVYRGSGGI-------------Q 202 (305)
Q Consensus 155 ~~~~~~~~~d~Vi~~~~g-------------------~~~~~a~~~gv~~~V~iSS~~~~~~~~~~-------------~ 202 (305)
.+..+.+++|+|||+++. .+.+++.+.++++||++||.+++...... .
T Consensus 81 ~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~nv~g~~~ll~~a~~~~~~~~v~iSS~~v~~~~~~~~~~~~~~~~~~~~~ 160 (367)
T TIGR01746 81 EWERLAENVDTIVHNGALVNWVYPYSELRAANVLGTREVLRLAASGRAKPLHYVSTISVLAAIDLSTVTEDDAIVTPPPG 160 (367)
T ss_pred HHHHHHhhCCEEEeCCcEeccCCcHHHHhhhhhHHHHHHHHHHhhCCCceEEEEccccccCCcCCCCccccccccccccc
Confidence 677778899999988431 13456777888999999999887542110 0
Q ss_pred cccchHHHHHHHHHHHHHHh---CCCCEEEEecCCcccCCCCCc----ce------------eeecCCC-CCCccCHHHH
Q 021928 203 ALMKGNARKLAEQDESMLMA---SGIPYTIIRTGVLQNTPGGKQ----GF------------QFEEGCA-ANGSLSKEDA 262 (305)
Q Consensus 203 ~~~~~~~~~~~~~aE~~l~~---~gi~~tilRPg~l~~~~~~~~----~~------------~~~~~~~-~~~~Is~~Dv 262 (305)
....| ...|..+|.++++ .+++++++|||.+.+....+. .. .++.... ...+++++|+
T Consensus 161 ~~~~Y--~~sK~~~E~~~~~~~~~g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~vddv 238 (367)
T TIGR01746 161 LAGGY--AQSKWVAELLVREASDRGLPVTIVRPGRILGNSYTGAINSSDILWRMVKGCLALGAYPDSPELTEDLTPVDYV 238 (367)
T ss_pred cCCCh--HHHHHHHHHHHHHHHhcCCCEEEECCCceeecCCCCCCCchhHHHHHHHHHHHhCCCCCCCccccCcccHHHH
Confidence 01112 2234445655543 599999999999765321110 00 0111121 3568999999
Q ss_pred HHHHHHHhhCCCC--CCcEEEEecCC-cCHHHHHHHHHHhhhh
Q 021928 263 AFICVEALESIPQ--TGLIFEVVNGE-EKVSDWKKCFSRLMEK 302 (305)
Q Consensus 263 A~~iv~~l~~~~~--~~~~~~v~~g~-~s~~d~~~~~~~l~~~ 302 (305)
|++++.++..+.. .+++|++++++ .+++++++.+.+ .+.
T Consensus 239 a~ai~~~~~~~~~~~~~~~~~v~~~~~~s~~e~~~~i~~-~g~ 280 (367)
T TIGR01746 239 ARAIVALSSQPAASAGGPVFHVVNPEPVSLDEFLEWLER-AGY 280 (367)
T ss_pred HHHHHHHHhCCCcccCCceEEecCCCCCCHHHHHHHHHH-cCC
Confidence 9999999877654 27899999865 588999998887 554
|
It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold. |
| >PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase | Back alignment and domain information |
|---|
Probab=99.79 E-value=7.5e-18 Score=154.32 Aligned_cols=185 Identities=11% Similarity=0.033 Sum_probs=130.5
Q ss_pred EEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcC--ccEEEECCcc-------
Q 021928 102 LVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRG--VRSIICPSEG------- 172 (305)
Q Consensus 102 lVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~--~d~Vi~~~~g------- 172 (305)
|||||+||||++|+++|++.|++|+++.+. ..+|+.|.+++.++++. +|+|||+++.
T Consensus 1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~--------------~~~Dl~~~~~l~~~~~~~~~d~Vih~A~~~~~~~~~ 66 (306)
T PLN02725 1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTH--------------KELDLTRQADVEAFFAKEKPTYVILAAAKVGGIHAN 66 (306)
T ss_pred CcccCCCcccHHHHHHHHhCCCcEEEeecc--------------ccCCCCCHHHHHHHHhccCCCEEEEeeeeecccchh
Confidence 699999999999999999999988866432 14899999999998874 6999988320
Q ss_pred ----------------hHhhhhhhcCCCEEEEEcccccccCCCC------------ccccc-chHHHHHHHHHH----HH
Q 021928 173 ----------------FISNAGSLKGVQHVILLSQLSVYRGSGG------------IQALM-KGNARKLAEQDE----SM 219 (305)
Q Consensus 173 ----------------~~~~~a~~~gv~~~V~iSS~~~~~~~~~------------~~~~~-~~~~~~~~~~aE----~~ 219 (305)
.+.+++++.++++||++||..+|.+... ..+.. .|.. .|..+| .+
T Consensus 67 ~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~--sK~~~e~~~~~~ 144 (306)
T PLN02725 67 MTYPADFIRENLQIQTNVIDAAYRHGVKKLLFLGSSCIYPKFAPQPIPETALLTGPPEPTNEWYAI--AKIAGIKMCQAY 144 (306)
T ss_pred hhCcHHHHHHHhHHHHHHHHHHHHcCCCeEEEeCceeecCCCCCCCCCHHHhccCCCCCCcchHHH--HHHHHHHHHHHH
Confidence 0455677789999999999988763211 00101 1221 233333 34
Q ss_pred HHhCCCCEEEEecCCcccCCCC----------------------Cccee--eecCCCCCCccCHHHHHHHHHHHhhCCCC
Q 021928 220 LMASGIPYTIIRTGVLQNTPGG----------------------KQGFQ--FEEGCAANGSLSKEDAAFICVEALESIPQ 275 (305)
Q Consensus 220 l~~~gi~~tilRPg~l~~~~~~----------------------~~~~~--~~~~~~~~~~Is~~DvA~~iv~~l~~~~~ 275 (305)
.+..+++++++||+.+.+.... +.+.. ++.+.....+|+++|+|++++.+++...
T Consensus 145 ~~~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dv~~~~~~~~~~~~- 223 (306)
T PLN02725 145 RIQYGWDAISGMPTNLYGPHDNFHPENSHVIPALIRRFHEAKANGAPEVVVWGSGSPLREFLHVDDLADAVVFLMRRYS- 223 (306)
T ss_pred HHHhCCCEEEEEecceeCCCCCCCCCCCcccHHHHHHHHHHhhcCCCeEEEcCCCCeeeccccHHHHHHHHHHHHhccc-
Confidence 4567999999999985543210 11111 2334455689999999999999998653
Q ss_pred CCcEEEEecCC-cCHHHHHHHHHHhhhhc
Q 021928 276 TGLIFEVVNGE-EKVSDWKKCFSRLMEKT 303 (305)
Q Consensus 276 ~~~~~~v~~g~-~s~~d~~~~~~~l~~~~ 303 (305)
....||+++++ .++.|+.+.+.+..+.+
T Consensus 224 ~~~~~ni~~~~~~s~~e~~~~i~~~~~~~ 252 (306)
T PLN02725 224 GAEHVNVGSGDEVTIKELAELVKEVVGFE 252 (306)
T ss_pred cCcceEeCCCCcccHHHHHHHHHHHhCCC
Confidence 34578998765 58999999999987754
|
|
| >TIGR01777 yfcH conserved hypothetical protein TIGR01777 | Back alignment and domain information |
|---|
Probab=99.79 E-value=5e-18 Score=154.24 Aligned_cols=197 Identities=17% Similarity=0.152 Sum_probs=128.8
Q ss_pred EEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEECCcc--------
Q 021928 101 VLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG-------- 172 (305)
Q Consensus 101 vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~g-------- 172 (305)
||||||+|+||++++++|+++|++|++++|++.+....... . ..|+.. ..+.+++.++|+|||+++.
T Consensus 1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~--~--~~~~~~-~~~~~~~~~~D~Vvh~a~~~~~~~~~~ 75 (292)
T TIGR01777 1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTKWE--G--YKPWAP-LAESEALEGADAVINLAGEPIADKRWT 75 (292)
T ss_pred CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCcccce--e--eecccc-cchhhhcCCCCEEEECCCCCcccccCC
Confidence 69999999999999999999999999999988654321111 1 123322 4556788899999988421
Q ss_pred ----------------hHhhhhhhcCCC--EEEEEcccccccCCCCcc------cccchHHHHHHHHHHHH---HHhCCC
Q 021928 173 ----------------FISNAGSLKGVQ--HVILLSQLSVYRGSGGIQ------ALMKGNARKLAEQDESM---LMASGI 225 (305)
Q Consensus 173 ----------------~~~~~a~~~gv~--~~V~iSS~~~~~~~~~~~------~~~~~~~~~~~~~aE~~---l~~~gi 225 (305)
.+.+++++.+++ +||+.|+..+|....... .+......+.+...|.. +++.++
T Consensus 76 ~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~i~~S~~~~yg~~~~~~~~E~~~~~~~~~~~~~~~~~e~~~~~~~~~~~ 155 (292)
T TIGR01777 76 EERKQEIRDSRIDTTRALVEAIAAAEQKPKVFISASAVGYYGTSEDRVFTEEDSPAGDDFLAELCRDWEEAAQAAEDLGT 155 (292)
T ss_pred HHHHHHHHhcccHHHHHHHHHHHhcCCCceEEEEeeeEEEeCCCCCCCcCcccCCCCCChHHHHHHHHHHHhhhchhcCC
Confidence 033456677764 566667766665321100 10000111122223333 345689
Q ss_pred CEEEEecCCcccCCCC-----------CcceeeecCCCCCCccCHHHHHHHHHHHhhCCCCCCcEEEEecCC-cCHHHHH
Q 021928 226 PYTIIRTGVLQNTPGG-----------KQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVVNGE-EKVSDWK 293 (305)
Q Consensus 226 ~~tilRPg~l~~~~~~-----------~~~~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~~~~~~~~v~~g~-~s~~d~~ 293 (305)
+++++||+.+.+.... .....++.++....+|+++|+|+++..+++++.. +.+|++++++ .++.|++
T Consensus 156 ~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~i~v~Dva~~i~~~l~~~~~-~g~~~~~~~~~~s~~di~ 234 (292)
T TIGR01777 156 RVVLLRTGIVLGPKGGALAKMLPPFRLGLGGPLGSGRQWFSWIHIEDLVQLILFALENASI-SGPVNATAPEPVRNKEFA 234 (292)
T ss_pred ceEEEeeeeEECCCcchhHHHHHHHhcCcccccCCCCcccccEeHHHHHHHHHHHhcCccc-CCceEecCCCccCHHHHH
Confidence 9999999996643210 0111123445557899999999999999987654 4589999865 5999999
Q ss_pred HHHHHhhhhc
Q 021928 294 KCFSRLMEKT 303 (305)
Q Consensus 294 ~~~~~l~~~~ 303 (305)
+.+++..+.+
T Consensus 235 ~~i~~~~g~~ 244 (292)
T TIGR01777 235 KALARALHRP 244 (292)
T ss_pred HHHHHHhCCC
Confidence 9999988754
|
This model represents a clade of proteins of unknown function including the E. coli yfcH protein. |
| >PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases | Back alignment and domain information |
|---|
Probab=99.78 E-value=3.7e-18 Score=154.37 Aligned_cols=193 Identities=19% Similarity=0.244 Sum_probs=136.9
Q ss_pred EEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcchhhh---hc----C-CCcE----EeecCCCCHHHHHHHhc--CccE
Q 021928 101 VLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAME---SF----G-TYVE----SMAGDASNKKFLKTALR--GVRS 165 (305)
Q Consensus 101 vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~---~~----~-~~v~----~v~~D~~d~~~~~~~~~--~~d~ 165 (305)
||||||+|.||++||++|++.+. ++++++|++.+..+ .+ + .++. .+.+|+.|.+.+..+++ ++|+
T Consensus 1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~~pdi 80 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEYKPDI 80 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT--T-SE
T ss_pred CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhcCCCE
Confidence 79999999999999999999995 79999999876321 12 2 2343 46899999999999999 8899
Q ss_pred EEECCcc----------------------hHhhhhhhcCCCEEEEEcccccccCCCCcccccchHHHHHHHHHHHHHHh-
Q 021928 166 IICPSEG----------------------FISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMA- 222 (305)
Q Consensus 166 Vi~~~~g----------------------~~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~~~~~~aE~~l~~- 222 (305)
|||+++- .+.++|.+.+|++||++||..+.+|.+.++.. |+.+|.++..
T Consensus 81 VfHaAA~KhVpl~E~~p~eav~tNv~GT~nv~~aa~~~~v~~~v~ISTDKAv~PtnvmGat--------KrlaE~l~~~~ 152 (293)
T PF02719_consen 81 VFHAAALKHVPLMEDNPFEAVKTNVLGTQNVAEAAIEHGVERFVFISTDKAVNPTNVMGAT--------KRLAEKLVQAA 152 (293)
T ss_dssp EEE------HHHHCCCHHHHHHHHCHHHHHHHHHHHHTT-SEEEEEEECGCSS--SHHHHH--------HHHHHHHHHHH
T ss_pred EEEChhcCCCChHHhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccccCCCCcHHHHH--------HHHHHHHHHHH
Confidence 9999541 26678888999999999999998887766543 6678888764
Q ss_pred ------CCCCEEEEecCCcccCCC-----------CCcceeeecCCCCCCccCHHHHHHHHHHHhhCCCCCCcEEEEecC
Q 021928 223 ------SGIPYTIIRTGVLQNTPG-----------GKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVVNG 285 (305)
Q Consensus 223 ------~gi~~tilRPg~l~~~~~-----------~~~~~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~~~~~~~~v~~g 285 (305)
.+..++++|-|.+.+..+ .+.++.+..++..+-+++.++.++.++++.... ..|++|.+--|
T Consensus 153 ~~~~~~~~t~f~~VRFGNVlgS~GSVip~F~~Qi~~g~PlTvT~p~mtRffmti~EAv~Lvl~a~~~~-~~geifvl~mg 231 (293)
T PF02719_consen 153 NQYSGNSDTKFSSVRFGNVLGSRGSVIPLFKKQIKNGGPLTVTDPDMTRFFMTIEEAVQLVLQAAALA-KGGEIFVLDMG 231 (293)
T ss_dssp CCTSSSS--EEEEEEE-EETTGTTSCHHHHHHHHHTTSSEEECETT-EEEEE-HHHHHHHHHHHHHH---TTEEEEE---
T ss_pred hhhCCCCCcEEEEEEecceecCCCcHHHHHHHHHHcCCcceeCCCCcEEEEecHHHHHHHHHHHHhhC-CCCcEEEecCC
Confidence 246789999999665433 345566656666678899999999999998643 34788888875
Q ss_pred C-cCHHHHHHHHHHhhhh
Q 021928 286 E-EKVSDWKKCFSRLMEK 302 (305)
Q Consensus 286 ~-~s~~d~~~~~~~l~~~ 302 (305)
+ .++.|+++.+.++.|.
T Consensus 232 ~~v~I~dlA~~~i~~~g~ 249 (293)
T PF02719_consen 232 EPVKILDLAEAMIELSGL 249 (293)
T ss_dssp TCEECCCHHHHHHHHTT-
T ss_pred CCcCHHHHHHHHHhhccc
Confidence 5 5899999999888874
|
The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A. |
| >COG2910 Putative NADH-flavin reductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.8e-17 Score=138.08 Aligned_cols=181 Identities=14% Similarity=0.180 Sum_probs=132.6
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEEC-C---cc--
Q 021928 99 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP-S---EG-- 172 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~-~---~g-- 172 (305)
|+|.|.||||.+|++|++.+.++||+|++++|++++.... +.+.+++.|+.|.+++.+.+.|.|+||.+ . ++
T Consensus 1 mKIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~--~~~~i~q~Difd~~~~a~~l~g~DaVIsA~~~~~~~~~ 78 (211)
T COG2910 1 MKIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAAR--QGVTILQKDIFDLTSLASDLAGHDAVISAFGAGASDND 78 (211)
T ss_pred CeEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhcccc--ccceeecccccChhhhHhhhcCCceEEEeccCCCCChh
Confidence 7899999999999999999999999999999999887643 55889999999999999999999999987 1 22
Q ss_pred --------hHhhhhhhcCCCEEEEEccccccc---C------CCCcccccchHHHHHHHHHHHHHHhCCCCEEEEecCCc
Q 021928 173 --------FISNAGSLKGVQHVILLSQLSVYR---G------SGGIQALMKGNARKLAEQDESMLMASGIPYTIIRTGVL 235 (305)
Q Consensus 173 --------~~~~~a~~~gv~~~V~iSS~~~~~---~------~~~~~~~~~~~~~~~~~~aE~~l~~~gi~~tilRPg~l 235 (305)
.+....+.+++.|++.+...+.-. . +.-+..|.+ .+....+..+.+-.+..++||+|.|..+
T Consensus 79 ~~~~k~~~~li~~l~~agv~RllVVGGAGSL~id~g~rLvD~p~fP~ey~~-~A~~~ae~L~~Lr~~~~l~WTfvSPaa~ 157 (211)
T COG2910 79 ELHSKSIEALIEALKGAGVPRLLVVGGAGSLEIDEGTRLVDTPDFPAEYKP-EALAQAEFLDSLRAEKSLDWTFVSPAAF 157 (211)
T ss_pred HHHHHHHHHHHHHHhhcCCeeEEEEcCccceEEcCCceeecCCCCchhHHH-HHHHHHHHHHHHhhccCcceEEeCcHHh
Confidence 145566778999999997654422 1 111122211 1222222223333356799999999984
Q ss_pred c-cCCCCCcceeee-----cCCCCCCccCHHHHHHHHHHHhhCCCCCCcEEEEe
Q 021928 236 Q-NTPGGKQGFQFE-----EGCAANGSLSKEDAAFICVEALESIPQTGLIFEVV 283 (305)
Q Consensus 236 ~-~~~~~~~~~~~~-----~~~~~~~~Is~~DvA~~iv~~l~~~~~~~~~~~v~ 283 (305)
. ++..+++ +.++ .+....++||.+|-|-+++..+++|.+.++.|.+.
T Consensus 158 f~PGerTg~-yrlggD~ll~n~~G~SrIS~aDYAiA~lDe~E~~~h~rqRftv~ 210 (211)
T COG2910 158 FEPGERTGN-YRLGGDQLLVNAKGESRISYADYAIAVLDELEKPQHIRQRFTVA 210 (211)
T ss_pred cCCccccCc-eEeccceEEEcCCCceeeeHHHHHHHHHHHHhcccccceeeeec
Confidence 4 4433333 2221 33445689999999999999999999998888764
|
|
| >PLN02996 fatty acyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.5e-17 Score=162.81 Aligned_cols=206 Identities=16% Similarity=0.214 Sum_probs=141.6
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCC---eEEEEEcCcch--hh-----h-----hc---------------CCCcEEe
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRT---RIKALVKDKRN--AM-----E-----SF---------------GTYVESM 146 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~---~V~~~~R~~~~--~~-----~-----~~---------------~~~v~~v 146 (305)
.+++|+|||||||||+++++.|+..+. +|++++|.... .. + .+ ..+++++
T Consensus 10 ~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~~i 89 (491)
T PLN02996 10 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTPV 89 (491)
T ss_pred CCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEEEE
Confidence 348999999999999999999997653 68899997532 00 1 01 1468999
Q ss_pred ecCCC-------CHHHHHHHhcCccEEEECCcc-------------------hHhhhhhhc-CCCEEEEEcccccccCCC
Q 021928 147 AGDAS-------NKKFLKTALRGVRSIICPSEG-------------------FISNAGSLK-GVQHVILLSQLSVYRGSG 199 (305)
Q Consensus 147 ~~D~~-------d~~~~~~~~~~~d~Vi~~~~g-------------------~~~~~a~~~-gv~~~V~iSS~~~~~~~~ 199 (305)
.+|+. |.+.+..+++++|+|||+++. .+.+++++. ++++||++||..+++...
T Consensus 90 ~GDl~~~~LGLs~~~~~~~l~~~vD~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~k~~V~vST~~vyG~~~ 169 (491)
T PLN02996 90 PGDISYDDLGVKDSNLREEMWKEIDIVVNLAATTNFDERYDVALGINTLGALNVLNFAKKCVKVKMLLHVSTAYVCGEKS 169 (491)
T ss_pred ecccCCcCCCCChHHHHHHHHhCCCEEEECccccCCcCCHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeeeEEecCCC
Confidence 99998 555577888999999998431 134556664 789999999998885321
Q ss_pred Cc-----cc----c------------------------------------------------cchHHHHHHHHHHHHHHh
Q 021928 200 GI-----QA----L------------------------------------------------MKGNARKLAEQDESMLMA 222 (305)
Q Consensus 200 ~~-----~~----~------------------------------------------------~~~~~~~~~~~aE~~l~~ 222 (305)
+. .+ + .+..+...|..+|.++++
T Consensus 170 ~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pn~Y~~TK~~aE~lv~~ 249 (491)
T PLN02996 170 GLILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKLHGWPNTYVFTKAMGEMLLGN 249 (491)
T ss_pred ceeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHHhCCCCCchHhhHHHHHHHHHH
Confidence 10 00 0 000022234567777765
Q ss_pred --CCCCEEEEecCCcccCC-----CC--------------Ccc---eeeecCCCCCCccCHHHHHHHHHHHhhCC--C-C
Q 021928 223 --SGIPYTIIRTGVLQNTP-----GG--------------KQG---FQFEEGCAANGSLSKEDAAFICVEALESI--P-Q 275 (305)
Q Consensus 223 --~gi~~tilRPg~l~~~~-----~~--------------~~~---~~~~~~~~~~~~Is~~DvA~~iv~~l~~~--~-~ 275 (305)
.+++++++||+.+.+.. +. +.+ ..++.++....+|+++|+|++++.++... . .
T Consensus 250 ~~~~lpv~i~RP~~V~G~~~~p~~gwi~~~~~~~~i~~~~~~g~~~~~~gdg~~~~D~v~Vddvv~a~l~a~~~~~~~~~ 329 (491)
T PLN02996 250 FKENLPLVIIRPTMITSTYKEPFPGWIEGLRTIDSVIVGYGKGKLTCFLADPNSVLDVIPADMVVNAMIVAMAAHAGGQG 329 (491)
T ss_pred hcCCCCEEEECCCEeccCCcCCCCCcccchhhHHHHHHHhccceEeEEecCCCeecceecccHHHHHHHHHHHHhhccCC
Confidence 58999999999865321 10 111 12234556688999999999999998753 1 2
Q ss_pred CCcEEEEecC---CcCHHHHHHHHHHhhhh
Q 021928 276 TGLIFEVVNG---EEKVSDWKKCFSRLMEK 302 (305)
Q Consensus 276 ~~~~~~v~~g---~~s~~d~~~~~~~l~~~ 302 (305)
.+.+||++++ +.++.++.+.+.+..+.
T Consensus 330 ~~~vYNi~s~~~~~~s~~ei~~~~~~~~~~ 359 (491)
T PLN02996 330 SEIIYHVGSSLKNPVKFSNLHDFAYRYFSK 359 (491)
T ss_pred CCcEEEecCCCCCcccHHHHHHHHHHHhhh
Confidence 4679999987 35889999988776553
|
|
| >PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=4.1e-17 Score=144.25 Aligned_cols=190 Identities=16% Similarity=0.165 Sum_probs=129.4
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh-------hcCCCcEEeecCCCCHHHHHHHhc-------C
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME-------SFGTYVESMAGDASNKKFLKTALR-------G 162 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~-------~~~~~v~~v~~D~~d~~~~~~~~~-------~ 162 (305)
++++||||||+|+||++++++|+++|++|+++.|+..+..+ ..+.++.++.+|+.|.+++.++++ +
T Consensus 5 ~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~ 84 (249)
T PRK12825 5 MGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVERFGR 84 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHHHcCC
Confidence 45899999999999999999999999999888877554211 123468899999999998887764 5
Q ss_pred ccEEEECCcc----h----------------------Hhh----hhhhcCCCEEEEEcccccccCCCCcccccchHH--H
Q 021928 163 VRSIICPSEG----F----------------------ISN----AGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA--R 210 (305)
Q Consensus 163 ~d~Vi~~~~g----~----------------------~~~----~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~--~ 210 (305)
+|+|||+++. . +.+ .+++.++++||++||...+.+......|...+. .
T Consensus 85 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~i~~SS~~~~~~~~~~~~y~~sK~~~~ 164 (249)
T PRK12825 85 IDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQRGGRIVNISSVAGLPGWPGRSNYAAAKAGLV 164 (249)
T ss_pred CCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECccccCCCCCCchHHHHHHHHHH
Confidence 6999987430 0 111 124567899999999888765444444443321 1
Q ss_pred HHHHHHHHHHHhCCCCEEEEecCCcccCCCCCcc--eeeec--CCCCCCccCHHHHHHHHHHHhhCCC--CCCcEEEEec
Q 021928 211 KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQG--FQFEE--GCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVN 284 (305)
Q Consensus 211 ~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~~~--~~~~~--~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~v~~ 284 (305)
.+.+.....+.+.+++++++|||++.+....... ..... ......+++.+|+|+++..++.++. ..++.|++.+
T Consensus 165 ~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~~~~~~g~~~~i~~ 244 (249)
T PRK12825 165 GLTKALARELAEYGITVNMVAPGDIDTDMKEATIEEAREAKDAETPLGRSGTPEDIARAVAFLCSDASDYITGQVIEVTG 244 (249)
T ss_pred HHHHHHHHHHhhcCeEEEEEEECCccCCccccccchhHHhhhccCCCCCCcCHHHHHHHHHHHhCccccCcCCCEEEeCC
Confidence 1122223334557999999999997654321110 00001 1223458899999999999997653 4689999997
Q ss_pred CC
Q 021928 285 GE 286 (305)
Q Consensus 285 g~ 286 (305)
|.
T Consensus 245 g~ 246 (249)
T PRK12825 245 GV 246 (249)
T ss_pred CE
Confidence 74
|
|
| >TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase | Back alignment and domain information |
|---|
Probab=99.76 E-value=4.4e-17 Score=149.79 Aligned_cols=197 Identities=14% Similarity=0.085 Sum_probs=132.9
Q ss_pred EEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHh----cCccEEEECCcc---
Q 021928 101 VLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTAL----RGVRSIICPSEG--- 172 (305)
Q Consensus 101 vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~----~~~d~Vi~~~~g--- 172 (305)
||||||+|+||++++++|+++|+ +|+++.|..... .........+..|+.+.+.++.+. .++|+|||+++.
T Consensus 1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~-~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~D~vvh~A~~~~~ 79 (314)
T TIGR02197 1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGH-KFLNLADLVIADYIDKEDFLDRLEKGAFGKIEAIFHQGACSDT 79 (314)
T ss_pred CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCch-hhhhhhheeeeccCcchhHHHHHHhhccCCCCEEEECccccCc
Confidence 69999999999999999999998 788877654321 111111245678888877777665 479999988431
Q ss_pred -----------------hHhhhhhhcCCCEEEEEcccccccCCCCc--------ccccchHHHHHHHHHHHHHHh-----
Q 021928 173 -----------------FISNAGSLKGVQHVILLSQLSVYRGSGGI--------QALMKGNARKLAEQDESMLMA----- 222 (305)
Q Consensus 173 -----------------~~~~~a~~~gv~~~V~iSS~~~~~~~~~~--------~~~~~~~~~~~~~~aE~~l~~----- 222 (305)
.+.+++.+.++ +||++||..+|...... .+...| ...|..+|.++++
T Consensus 80 ~~~~~~~~~~~n~~~~~~ll~~~~~~~~-~~v~~SS~~vy~~~~~~~~e~~~~~~p~~~Y--~~sK~~~e~~~~~~~~~~ 156 (314)
T TIGR02197 80 TETDGEYMMENNYQYSKRLLDWCAEKGI-PFIYASSAATYGDGEAGFREGRELERPLNVY--GYSKFLFDQYVRRRVLPE 156 (314)
T ss_pred cccchHHHHHHHHHHHHHHHHHHHHhCC-cEEEEccHHhcCCCCCCcccccCcCCCCCHH--HHHHHHHHHHHHHHhHhh
Confidence 13455667777 79999999888632110 111122 2234456665543
Q ss_pred -CCCCEEEEecCCcccCCCC------------------Ccceee-------ecCCCCCCccCHHHHHHHHHHHhhCCCCC
Q 021928 223 -SGIPYTIIRTGVLQNTPGG------------------KQGFQF-------EEGCAANGSLSKEDAAFICVEALESIPQT 276 (305)
Q Consensus 223 -~gi~~tilRPg~l~~~~~~------------------~~~~~~-------~~~~~~~~~Is~~DvA~~iv~~l~~~~~~ 276 (305)
.+++++++||+.+.+.... +....+ +.++....+++++|+|+++..++.. ..
T Consensus 157 ~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~~i~~~~~~--~~ 234 (314)
T TIGR02197 157 ALSAQVVGLRYFNVYGPREYHKGKMASVAFHLFNQIKAGGNVKLFKSSEGFKDGEQLRDFVYVKDVVDVNLWLLEN--GV 234 (314)
T ss_pred ccCCceEEEEEeeccCCCCCCCCCcccHHHHHHHHHhcCCCeEEecCccccCCCCceeeeEEHHHHHHHHHHHHhc--cc
Confidence 3579999999885542210 011111 1233346799999999999999987 34
Q ss_pred CcEEEEecCC-cCHHHHHHHHHHhhhhc
Q 021928 277 GLIFEVVNGE-EKVSDWKKCFSRLMEKT 303 (305)
Q Consensus 277 ~~~~~v~~g~-~s~~d~~~~~~~l~~~~ 303 (305)
+.+||+++++ .++.|+++.+.++.+.+
T Consensus 235 ~~~yni~~~~~~s~~e~~~~i~~~~g~~ 262 (314)
T TIGR02197 235 SGIFNLGTGRARSFNDLADAVFKALGKD 262 (314)
T ss_pred CceEEcCCCCCccHHHHHHHHHHHhCCC
Confidence 5799999875 58999999999988754
|
This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370). |
| >PRK12429 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=4e-17 Score=145.69 Aligned_cols=188 Identities=17% Similarity=0.143 Sum_probs=128.8
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh------cCCCcEEeecCCCCHHHHHHHhc-------Ccc
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GVR 164 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~~~v~~v~~D~~d~~~~~~~~~-------~~d 164 (305)
+++|+||||+|+||++++++|+++|++|+++.|++++..+. .+.++.++.+|+.|.+++.++++ ++|
T Consensus 4 ~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d 83 (258)
T PRK12429 4 GKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGGVD 83 (258)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 48999999999999999999999999999999987653221 23468899999999998877765 579
Q ss_pred EEEECCcch------------------------------HhhhhhhcCCCEEEEEcccccccCCCCcccccchHH--HHH
Q 021928 165 SIICPSEGF------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA--RKL 212 (305)
Q Consensus 165 ~Vi~~~~g~------------------------------~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~--~~~ 212 (305)
+|||+++.. +...+++.+.++||++||...+.+..+...|...+. ..+
T Consensus 84 ~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~~k~a~~~~ 163 (258)
T PRK12429 84 ILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQGGGRIINMASVHGLVGSAGKAAYVSAKHGLIGL 163 (258)
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCeEEEEEcchhhccCCCCcchhHHHHHHHHHH
Confidence 999874310 112234567889999999877766555555544322 111
Q ss_pred HHHHHHHHHhCCCCEEEEecCCcccCCCCC--c------ce--------eeecCCCCCCccCHHHHHHHHHHHhhCCC--
Q 021928 213 AEQDESMLMASGIPYTIIRTGVLQNTPGGK--Q------GF--------QFEEGCAANGSLSKEDAAFICVEALESIP-- 274 (305)
Q Consensus 213 ~~~aE~~l~~~gi~~tilRPg~l~~~~~~~--~------~~--------~~~~~~~~~~~Is~~DvA~~iv~~l~~~~-- 274 (305)
.+.....+...++.+++++||++....... . .. .+........+++++|+|+++..++....
T Consensus 164 ~~~l~~~~~~~~i~v~~~~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~ 243 (258)
T PRK12429 164 TKVVALEGATHGVTVNAICPGYVDTPLVRKQIPDLAKERGISEEEVLEDVLLPLVPQKRFTTVEEIADYALFLASFAAKG 243 (258)
T ss_pred HHHHHHHhcccCeEEEEEecCCCcchhhhhhhhhhccccCCChHHHHHHHHhccCCccccCCHHHHHHHHHHHcCccccC
Confidence 111212234578999999999965322100 0 00 01111233578999999999999997644
Q ss_pred CCCcEEEEecC
Q 021928 275 QTGLIFEVVNG 285 (305)
Q Consensus 275 ~~~~~~~v~~g 285 (305)
..++.|++.+|
T Consensus 244 ~~g~~~~~~~g 254 (258)
T PRK12429 244 VTGQAWVVDGG 254 (258)
T ss_pred ccCCeEEeCCC
Confidence 35788988866
|
|
| >KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=99.76 E-value=3.1e-17 Score=145.16 Aligned_cols=199 Identities=15% Similarity=0.108 Sum_probs=152.2
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhh---hhcC--CCcEEeecCCCCHHHHHHHhcCccEEEECC
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM---ESFG--TYVESMAGDASNKKFLKTALRGVRSIICPS 170 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~---~~~~--~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~ 170 (305)
..+-.+-|+|||||+|+.+|.+|.+.|-+|++-.|..+... ...+ .++-+...|+.|+++|+++++..++||+..
T Consensus 59 ~sGiVaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~~r~lkvmGdLGQvl~~~fd~~DedSIr~vvk~sNVVINLI 138 (391)
T KOG2865|consen 59 VSGIVATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYDPRHLKVMGDLGQVLFMKFDLRDEDSIRAVVKHSNVVINLI 138 (391)
T ss_pred ccceEEEEecccccccHHHHHHHhhcCCeEEEeccCCccchhheeecccccceeeeccCCCCHHHHHHHHHhCcEEEEee
Confidence 34578899999999999999999999999999999764421 1222 368899999999999999999999999773
Q ss_pred c------c------------hHhhhhhhcCCCEEEEEcccccccCCCCcccccchHHHHHHHHHHHHHHhCCCCEEEEec
Q 021928 171 E------G------------FISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMASGIPYTIIRT 232 (305)
Q Consensus 171 ~------g------------~~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~~~~~~aE~~l~~~gi~~tilRP 232 (305)
+ . .++..|+++||.|||++|..++.- -.++...+.|...|..+++.--+.||+||
T Consensus 139 Grd~eTknf~f~Dvn~~~aerlAricke~GVerfIhvS~Lganv-------~s~Sr~LrsK~~gE~aVrdafPeAtIirP 211 (391)
T KOG2865|consen 139 GRDYETKNFSFEDVNVHIAERLARICKEAGVERFIHVSCLGANV-------KSPSRMLRSKAAGEEAVRDAFPEATIIRP 211 (391)
T ss_pred ccccccCCcccccccchHHHHHHHHHHhhChhheeehhhccccc-------cChHHHHHhhhhhHHHHHhhCCcceeech
Confidence 3 1 266779999999999999998531 11223344566788889998889999999
Q ss_pred CCcccCCCC-----------Cccee-eecC-CCCCCccCHHHHHHHHHHHhhCCCCCCcEEEEecCCc-CHHHHHHHHHH
Q 021928 233 GVLQNTPGG-----------KQGFQ-FEEG-CAANGSLSKEDAAFICVEALESIPQTGLIFEVVNGEE-KVSDWKKCFSR 298 (305)
Q Consensus 233 g~l~~~~~~-----------~~~~~-~~~~-~~~~~~Is~~DvA~~iv~~l~~~~~~~~~~~v~~g~~-s~~d~~~~~~~ 298 (305)
+.+.+.... ...+. +..| ......|.+-|||++|+.++.+|...|++|+..++.- ...++++++-.
T Consensus 212 a~iyG~eDrfln~ya~~~rk~~~~pL~~~GekT~K~PVyV~DVaa~IvnAvkDp~s~Gktye~vGP~~yql~eLvd~my~ 291 (391)
T KOG2865|consen 212 ADIYGTEDRFLNYYASFWRKFGFLPLIGKGEKTVKQPVYVVDVAAAIVNAVKDPDSMGKTYEFVGPDRYQLSELVDIMYD 291 (391)
T ss_pred hhhcccchhHHHHHHHHHHhcCceeeecCCcceeeccEEEehHHHHHHHhccCccccCceeeecCCchhhHHHHHHHHHH
Confidence 996654321 11111 1222 2346789999999999999999999999999997763 67888888776
Q ss_pred hhh
Q 021928 299 LME 301 (305)
Q Consensus 299 l~~ 301 (305)
+..
T Consensus 292 ~~~ 294 (391)
T KOG2865|consen 292 MAR 294 (391)
T ss_pred HHh
Confidence 653
|
|
| >COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.75 E-value=3.4e-17 Score=144.83 Aligned_cols=196 Identities=19% Similarity=0.207 Sum_probs=135.5
Q ss_pred EEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhc-CccEEEECCcch------
Q 021928 101 VLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR-GVRSIICPSEGF------ 173 (305)
Q Consensus 101 vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~-~~d~Vi~~~~g~------ 173 (305)
|+||||||+||++|+.+|.+.||+|++++|++.+....+..++. ..+.+..... ++|+||+.++..
T Consensus 1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~~~~~v~-------~~~~~~~~~~~~~DavINLAG~~I~~rrW 73 (297)
T COG1090 1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQNLHPNVT-------LWEGLADALTLGIDAVINLAGEPIAERRW 73 (297)
T ss_pred CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhhhcCcccc-------ccchhhhcccCCCCEEEECCCCccccccC
Confidence 68999999999999999999999999999999887666554333 1233444455 799999875421
Q ss_pred ------------------Hhhhhh--hcCCCEEEEEcccccccCCCCc-----ccccchHHHHHHHHHH---HHHHhCCC
Q 021928 174 ------------------ISNAGS--LKGVQHVILLSQLSVYRGSGGI-----QALMKGNARKLAEQDE---SMLMASGI 225 (305)
Q Consensus 174 ------------------~~~~a~--~~gv~~~V~iSS~~~~~~~~~~-----~~~~~~~~~~~~~~aE---~~l~~~gi 225 (305)
+.++.. +.+.+.+|--|.++.|+..... .+............=| ......+.
T Consensus 74 t~~~K~~i~~SRi~~T~~L~e~I~~~~~~P~~~isaSAvGyYG~~~~~~~tE~~~~g~~Fla~lc~~WE~~a~~a~~~gt 153 (297)
T COG1090 74 TEKQKEEIRQSRINTTEKLVELIAASETKPKVLISASAVGYYGHSGDRVVTEESPPGDDFLAQLCQDWEEEALQAQQLGT 153 (297)
T ss_pred CHHHHHHHHHHHhHHHHHHHHHHHhccCCCcEEEecceEEEecCCCceeeecCCCCCCChHHHHHHHHHHHHhhhhhcCc
Confidence 223333 4567777777888877643221 1111111211111111 22334689
Q ss_pred CEEEEecCCcccCCCC-----------CcceeeecCCCCCCccCHHHHHHHHHHHhhCCCCCCcEEEEecCC-cCHHHHH
Q 021928 226 PYTIIRTGVLQNTPGG-----------KQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVVNGE-EKVSDWK 293 (305)
Q Consensus 226 ~~tilRPg~l~~~~~~-----------~~~~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~~~~~~~~v~~g~-~s~~d~~ 293 (305)
+++++|.|.+....++ +-+-.++.|.+..+|||+||+++++..+++++...| .||++++. .+.+++.
T Consensus 154 RvvllRtGvVLs~~GGaL~~m~~~fk~glGG~~GsGrQ~~SWIhieD~v~~I~fll~~~~lsG-p~N~taP~PV~~~~F~ 232 (297)
T COG1090 154 RVVLLRTGVVLSPDGGALGKMLPLFKLGLGGKLGSGRQWFSWIHIEDLVNAILFLLENEQLSG-PFNLTAPNPVRNKEFA 232 (297)
T ss_pred eEEEEEEEEEecCCCcchhhhcchhhhccCCccCCCCceeeeeeHHHHHHHHHHHHhCcCCCC-cccccCCCcCcHHHHH
Confidence 9999999996543321 122234667777899999999999999999887765 78998754 5889999
Q ss_pred HHHHHhhhhcC
Q 021928 294 KCFSRLMEKTG 304 (305)
Q Consensus 294 ~~~~~l~~~~~ 304 (305)
..+.+++.||.
T Consensus 233 ~al~r~l~RP~ 243 (297)
T COG1090 233 HALGRALHRPA 243 (297)
T ss_pred HHHHHHhCCCc
Confidence 99999999875
|
|
| >PRK06482 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.4e-16 Score=144.30 Aligned_cols=197 Identities=11% Similarity=0.121 Sum_probs=127.0
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh---hcCCCcEEeecCCCCHHHHHHHhc-------CccEEE
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALR-------GVRSII 167 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~---~~~~~v~~v~~D~~d~~~~~~~~~-------~~d~Vi 167 (305)
.|+||||||+|+||++++++|+++|++|+++.|+++.... ..+.++.++.+|++|.+++.++++ ++|+||
T Consensus 2 ~k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi 81 (276)
T PRK06482 2 SKTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAALGRIDVVV 81 (276)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 4789999999999999999999999999999998765432 234568899999999988877654 479999
Q ss_pred ECCcch--------------------------Hhhh----hhhcCCCEEEEEcccccccCCCCcccccchHHH--HHHHH
Q 021928 168 CPSEGF--------------------------ISNA----GSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--KLAEQ 215 (305)
Q Consensus 168 ~~~~g~--------------------------~~~~----a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~--~~~~~ 215 (305)
|+++.. +.++ +++.+.++||++||.++..+.+....|..++.. .+.+.
T Consensus 82 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~ 161 (276)
T PRK06482 82 SNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQVSSEGGQIAYPGFSLYHATKWGIEGFVEA 161 (276)
T ss_pred ECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcCcccccCCCCCchhHHHHHHHHHHHHH
Confidence 984310 1122 245677899999998765444444444333221 11111
Q ss_pred HHHHHHhCCCCEEEEecCCcccCCCCC----ccee-ee-----------cCCCCCCccCHHHHHHHHHHHhhCCCCCCcE
Q 021928 216 DESMLMASGIPYTIIRTGVLQNTPGGK----QGFQ-FE-----------EGCAANGSLSKEDAAFICVEALESIPQTGLI 279 (305)
Q Consensus 216 aE~~l~~~gi~~tilRPg~l~~~~~~~----~~~~-~~-----------~~~~~~~~Is~~DvA~~iv~~l~~~~~~~~~ 279 (305)
....+...+++++++|||.+....+.+ .... +. ......-..+++|++++++.++..+.. +..
T Consensus 162 l~~~~~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~a~~~~~~~~~~-~~~ 240 (276)
T PRK06482 162 VAQEVAPFGIEFTIVEPGPARTNFGAGLDRGAPLDAYDDTPVGDLRRALADGSFAIPGDPQKMVQAMIASADQTPA-PRR 240 (276)
T ss_pred HHHHhhccCcEEEEEeCCccccCCcccccccCCCccccchhhHHHHHHHhhccCCCCCCHHHHHHHHHHHHcCCCC-CeE
Confidence 222233469999999999863322110 0000 00 000011135789999999999975543 456
Q ss_pred EEEecCCc-CHHHHHHH
Q 021928 280 FEVVNGEE-KVSDWKKC 295 (305)
Q Consensus 280 ~~v~~g~~-s~~d~~~~ 295 (305)
|++.++.. ++.++++.
T Consensus 241 ~~~g~~~~~~~~~~~~~ 257 (276)
T PRK06482 241 LTLGSDAYASIRAALSE 257 (276)
T ss_pred EecChHHHHHHHHHHHH
Confidence 88888763 44554443
|
|
| >PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1 | Back alignment and domain information |
|---|
Probab=99.75 E-value=2.1e-17 Score=151.25 Aligned_cols=186 Identities=15% Similarity=0.146 Sum_probs=130.7
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcC--ccEEEECCcc----
Q 021928 99 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRG--VRSIICPSEG---- 172 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~--~d~Vi~~~~g---- 172 (305)
|+||||||+|+||++|.++|.++|++|+++.|. ..|+.|.+.+.+.++. .|+|||+++-
T Consensus 1 MriLI~GasG~lG~~l~~~l~~~~~~v~~~~r~---------------~~dl~d~~~~~~~~~~~~pd~Vin~aa~~~~~ 65 (286)
T PF04321_consen 1 MRILITGASGFLGSALARALKERGYEVIATSRS---------------DLDLTDPEAVAKLLEAFKPDVVINCAAYTNVD 65 (286)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTTSEEEEEESTT---------------CS-TTSHHHHHHHHHHH--SEEEE------HH
T ss_pred CEEEEECCCCHHHHHHHHHHhhCCCEEEEeCch---------------hcCCCCHHHHHHHHHHhCCCeEeccceeecHH
Confidence 799999999999999999999999999999776 4789999999998875 6999988431
Q ss_pred ------------------hHhhhhhhcCCCEEEEEcccccccCCCCc--------ccccchHHHHHHHHHHHHHHhCCCC
Q 021928 173 ------------------FISNAGSLKGVQHVILLSQLSVYRGSGGI--------QALMKGNARKLAEQDESMLMASGIP 226 (305)
Q Consensus 173 ------------------~~~~~a~~~gv~~~V~iSS~~~~~~~~~~--------~~~~~~~~~~~~~~aE~~l~~~gi~ 226 (305)
.+++++.+.++ ++||+||..++.+.... .+.. ...+.|..+|+.+++..-+
T Consensus 66 ~ce~~p~~a~~iN~~~~~~la~~~~~~~~-~li~~STd~VFdG~~~~~y~E~d~~~P~~--~YG~~K~~~E~~v~~~~~~ 142 (286)
T PF04321_consen 66 ACEKNPEEAYAINVDATKNLAEACKERGA-RLIHISTDYVFDGDKGGPYTEDDPPNPLN--VYGRSKLEGEQAVRAACPN 142 (286)
T ss_dssp HHHHSHHHHHHHHTHHHHHHHHHHHHCT--EEEEEEEGGGS-SSTSSSB-TTS----SS--HHHHHHHHHHHHHHHH-SS
T ss_pred hhhhChhhhHHHhhHHHHHHHHHHHHcCC-cEEEeeccEEEcCCcccccccCCCCCCCC--HHHHHHHHHHHHHHHhcCC
Confidence 14455666776 89999999998654221 1111 2344567789999986669
Q ss_pred EEEEecCCcccCCC------------CCcceeeecCCCCCCccCHHHHHHHHHHHhhCCC---CCCcEEEEecCC-cCHH
Q 021928 227 YTIIRTGVLQNTPG------------GKQGFQFEEGCAANGSLSKEDAAFICVEALESIP---QTGLIFEVVNGE-EKVS 290 (305)
Q Consensus 227 ~tilRPg~l~~~~~------------~~~~~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~---~~~~~~~v~~g~-~s~~ 290 (305)
++|+|++++.+... .++.+.. ..+.....++++|+|+++..++++.. ....+||+++.+ .+..
T Consensus 143 ~~IlR~~~~~g~~~~~~~~~~~~~~~~~~~i~~-~~d~~~~p~~~~dlA~~i~~l~~~~~~~~~~~Giyh~~~~~~~S~~ 221 (286)
T PF04321_consen 143 ALILRTSWVYGPSGRNFLRWLLRRLRQGEPIKL-FDDQYRSPTYVDDLARVILELIEKNLSGASPWGIYHLSGPERVSRY 221 (286)
T ss_dssp EEEEEE-SEESSSSSSHHHHHHHHHHCTSEEEE-ESSCEE--EEHHHHHHHHHHHHHHHHH-GGG-EEEE---BS-EEHH
T ss_pred EEEEecceecccCCCchhhhHHHHHhcCCeeEe-eCCceeCCEEHHHHHHHHHHHHHhcccccccceeEEEecCcccCHH
Confidence 99999999665422 1222222 34555788999999999999998643 245799999866 6899
Q ss_pred HHHHHHHHhhhhc
Q 021928 291 DWKKCFSRLMEKT 303 (305)
Q Consensus 291 d~~~~~~~l~~~~ 303 (305)
|+.+.+.+..+..
T Consensus 222 e~~~~i~~~~~~~ 234 (286)
T PF04321_consen 222 EFAEAIAKILGLD 234 (286)
T ss_dssp HHHHHHHHHHTHC
T ss_pred HHHHHHHHHhCCC
Confidence 9999999988764
|
1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. |
| >PRK05875 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=2e-16 Score=143.10 Aligned_cols=205 Identities=15% Similarity=0.131 Sum_probs=133.0
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh---c-----CCCcEEeecCCCCHHHHHHHhc-------
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---F-----GTYVESMAGDASNKKFLKTALR------- 161 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~-----~~~v~~v~~D~~d~~~~~~~~~------- 161 (305)
.+++++||||+|+||++++++|+++|++|+++.|++++.... . ..++.++.+|+.|.+++.++++
T Consensus 6 ~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 85 (276)
T PRK05875 6 QDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAWHG 85 (276)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 458999999999999999999999999999999987553211 1 2367889999999988877765
Q ss_pred CccEEEECCcc-----h----------------------Hhhh----hhhcCCCEEEEEcccccccCCCCcccccchHHH
Q 021928 162 GVRSIICPSEG-----F----------------------ISNA----GSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR 210 (305)
Q Consensus 162 ~~d~Vi~~~~g-----~----------------------~~~~----a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~ 210 (305)
.+|++||+++. . +... ..+.+..+||++||..++.+.+....|...+..
T Consensus 86 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sK~a 165 (276)
T PRK05875 86 RLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAASNTHRWFGAYGVTKSA 165 (276)
T ss_pred CCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcCCCCCCcchHHHHHH
Confidence 67999988431 0 1111 112344689999999887665555455443321
Q ss_pred --HHHHHHHHHHHhCCCCEEEEecCCcccCCCCC----cce--eeecCCCCCCccCHHHHHHHHHHHhhCCCC--CCcEE
Q 021928 211 --KLAEQDESMLMASGIPYTIIRTGVLQNTPGGK----QGF--QFEEGCAANGSLSKEDAAFICVEALESIPQ--TGLIF 280 (305)
Q Consensus 211 --~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~----~~~--~~~~~~~~~~~Is~~DvA~~iv~~l~~~~~--~~~~~ 280 (305)
.+.+.....+...++++++++||++....... ... .+........+++++|+|+++..++.++.. .++++
T Consensus 166 ~~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~ 245 (276)
T PRK05875 166 VDHLMKLAADELGPSWVRVNSIRPGLIRTDLVAPITESPELSADYRACTPLPRVGEVEDVANLAMFLLSDAASWITGQVI 245 (276)
T ss_pred HHHHHHHHHHHhcccCeEEEEEecCccCCccccccccCHHHHHHHHcCCCCCCCcCHHHHHHHHHHHcCchhcCcCCCEE
Confidence 11111122233468999999999864322111 000 000111223456899999999999987653 48999
Q ss_pred EEecCCc-----CHHHHHHHHHHhhh
Q 021928 281 EVVNGEE-----KVSDWKKCFSRLME 301 (305)
Q Consensus 281 ~v~~g~~-----s~~d~~~~~~~l~~ 301 (305)
++.+|.. +..++++.+.+..+
T Consensus 246 ~~~~g~~~~~~~~~~~~~~~~~~~~~ 271 (276)
T PRK05875 246 NVDGGHMLRRGPDFSSMLEPVFGADG 271 (276)
T ss_pred EECCCeeccCCccHHHHHHHHhhHHH
Confidence 9998763 34555555444333
|
|
| >PRK12320 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.3e-16 Score=160.08 Aligned_cols=180 Identities=16% Similarity=0.183 Sum_probs=130.7
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEECCcc------
Q 021928 99 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG------ 172 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~g------ 172 (305)
|+||||||+||||++++++|+++|++|++++|.+... ...+++++.+|+.|.. +.+++.++|+|||+++.
T Consensus 1 MkILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~~---~~~~ve~v~~Dl~d~~-l~~al~~~D~VIHLAa~~~~~~~ 76 (699)
T PRK12320 1 MQILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHDA---LDPRVDYVCASLRNPV-LQELAGEADAVIHLAPVDTSAPG 76 (699)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhhc---ccCCceEEEccCCCHH-HHHHhcCCCEEEEcCccCccchh
Confidence 5899999999999999999999999999999876432 2346899999999974 78888999999998321
Q ss_pred --------hHhhhhhhcCCCEEEEEcccccccCCCCcccccchHHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCCc-
Q 021928 173 --------FISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQ- 243 (305)
Q Consensus 173 --------~~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~~- 243 (305)
.+.++|++.++ ++|++||... .. ..+ ..+|.++...+++++++|++.+++......
T Consensus 77 ~vNv~Gt~nLleAA~~~Gv-RiV~~SS~~G--~~---~~~---------~~aE~ll~~~~~p~~ILR~~nVYGp~~~~~~ 141 (699)
T PRK12320 77 GVGITGLAHVANAAARAGA-RLLFVSQAAG--RP---ELY---------RQAETLVSTGWAPSLVIRIAPPVGRQLDWMV 141 (699)
T ss_pred hHHHHHHHHHHHHHHHcCC-eEEEEECCCC--CC---ccc---------cHHHHHHHhcCCCEEEEeCceecCCCCcccH
Confidence 14567788887 7999998631 11 111 136777888889999999999655321100
Q ss_pred -cee---ee--cCCCCCCccCHHHHHHHHHHHhhCCCCCCcEEEEecCC-cCHHHHHHHHHHh
Q 021928 244 -GFQ---FE--EGCAANGSLSKEDAAFICVEALESIPQTGLIFEVVNGE-EKVSDWKKCFSRL 299 (305)
Q Consensus 244 -~~~---~~--~~~~~~~~Is~~DvA~~iv~~l~~~~~~~~~~~v~~g~-~s~~d~~~~~~~l 299 (305)
.+. +. ........|+++|++++++.+++.+. +.+|||++++ .++.++.+++...
T Consensus 142 ~r~I~~~l~~~~~~~pI~vIyVdDvv~alv~al~~~~--~GiyNIG~~~~~Si~el~~~i~~~ 202 (699)
T PRK12320 142 CRTVATLLRSKVSARPIRVLHLDDLVRFLVLALNTDR--NGVVDLATPDTTNVVTAWRLLRSV 202 (699)
T ss_pred hHHHHHHHHHHHcCCceEEEEHHHHHHHHHHHHhCCC--CCEEEEeCCCeeEHHHHHHHHHHh
Confidence 000 00 01122234699999999999997643 3499999987 4889988887654
|
|
| >COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.74 E-value=9e-17 Score=143.71 Aligned_cols=179 Identities=18% Similarity=0.160 Sum_probs=132.2
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh-------cCCCcEEeecCCCCHHHHHHHhc-------
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------FGTYVESMAGDASNKKFLKTALR------- 161 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~-------~~~~v~~v~~D~~d~~~~~~~~~------- 161 (305)
.++++++|||||++||.+++++|+++|++|+++.|+.+++.+. .+..++++.+|+++.+++.+...
T Consensus 4 ~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~~ 83 (265)
T COG0300 4 MKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERGG 83 (265)
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcCC
Confidence 4568999999999999999999999999999999999874332 33467899999999988877664
Q ss_pred CccEEEECCc----c-h-------------------------HhhhhhhcCCCEEEEEcccccccCCCCcccccchHH--
Q 021928 162 GVRSIICPSE----G-F-------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA-- 209 (305)
Q Consensus 162 ~~d~Vi~~~~----g-~-------------------------~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~-- 209 (305)
.+|++|+++| + + +..-+.+.+-.+||.++|..++.+.+.+..|..+++
T Consensus 84 ~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag~~p~p~~avY~ATKa~v 163 (265)
T COG0300 84 PIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAAGLIPTPYMAVYSATKAFV 163 (265)
T ss_pred cccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechhhcCCCcchHHHHHHHHHH
Confidence 5799998744 1 1 111234566779999999999988877777766553
Q ss_pred HHHHHHHHHHHHhCCCCEEEEecCCcccCCCCCcceeeecCCCCCCccCHHHHHHHHHHHhhCCC
Q 021928 210 RKLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIP 274 (305)
Q Consensus 210 ~~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~~~~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~ 274 (305)
..+.+.....|+..|+.++.|-||....+.....+...........+++.+|||+..+..+++..
T Consensus 164 ~~fSeaL~~EL~~~gV~V~~v~PG~~~T~f~~~~~~~~~~~~~~~~~~~~~~va~~~~~~l~~~k 228 (265)
T COG0300 164 LSFSEALREELKGTGVKVTAVCPGPTRTEFFDAKGSDVYLLSPGELVLSPEDVAEAALKALEKGK 228 (265)
T ss_pred HHHHHHHHHHhcCCCeEEEEEecCccccccccccccccccccchhhccCHHHHHHHHHHHHhcCC
Confidence 33445555667889999999999996544332111111111234578899999999999998643
|
|
| >PRK12828 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.7e-16 Score=139.73 Aligned_cols=186 Identities=15% Similarity=0.185 Sum_probs=128.3
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh----hcCCCcEEeecCCCCHHHHHHHhc-------CccE
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME----SFGTYVESMAGDASNKKFLKTALR-------GVRS 165 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~----~~~~~v~~v~~D~~d~~~~~~~~~-------~~d~ 165 (305)
++++||||||+|+||++++++|+++|++|++++|++.+..+ .....++++.+|+.|.+++.++++ ++|+
T Consensus 6 ~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~ 85 (239)
T PRK12828 6 QGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADALRIGGIDLVDPQAARRAVDEVNRQFGRLDA 85 (239)
T ss_pred CCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhcCceEEEeecCCHHHHHHHHHHHHHHhCCcCE
Confidence 35899999999999999999999999999999998765322 222357888999999888877665 5799
Q ss_pred EEECCcch--------------------------Hhh----hhhhcCCCEEEEEcccccccCCCCcccccchHH--HHHH
Q 021928 166 IICPSEGF--------------------------ISN----AGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA--RKLA 213 (305)
Q Consensus 166 Vi~~~~g~--------------------------~~~----~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~--~~~~ 213 (305)
|||+++.. +.+ ...+.++++||++||...+.+......|...+. ..+.
T Consensus 86 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~~sk~a~~~~~ 165 (239)
T PRK12828 86 LVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGAGAALKAGPGMGAYAAAKAGVARLT 165 (239)
T ss_pred EEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECchHhccCCCCcchhHHHHHHHHHHH
Confidence 99873310 111 123457889999999988766555444543221 1112
Q ss_pred HHHHHHHHhCCCCEEEEecCCcccCCCCCcceeeecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEEEEecCC
Q 021928 214 EQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVNGE 286 (305)
Q Consensus 214 ~~aE~~l~~~gi~~tilRPg~l~~~~~~~~~~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~v~~g~ 286 (305)
+.....+.+.+++++++|||++........ . .......+++++|+|+++..++.++. ..++.+.+.++.
T Consensus 166 ~~~a~~~~~~~i~~~~i~pg~v~~~~~~~~---~-~~~~~~~~~~~~dva~~~~~~l~~~~~~~~g~~~~~~g~~ 236 (239)
T PRK12828 166 EALAAELLDRGITVNAVLPSIIDTPPNRAD---M-PDADFSRWVTPEQIAAVIAFLLSDEAQAITGASIPVDGGV 236 (239)
T ss_pred HHHHHHhhhcCeEEEEEecCcccCcchhhc---C-CchhhhcCCCHHHHHHHHHHHhCcccccccceEEEecCCE
Confidence 222233445789999999999764421111 0 11122357899999999999998653 357888888764
|
|
| >KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.2e-16 Score=150.11 Aligned_cols=202 Identities=24% Similarity=0.325 Sum_probs=139.1
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcC-----CCcEEeecCCCCH-HHHHHHhcCc----c
Q 021928 95 PEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG-----TYVESMAGDASNK-KFLKTALRGV----R 164 (305)
Q Consensus 95 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~-----~~v~~v~~D~~d~-~~~~~~~~~~----d 164 (305)
...++.|+|+||+|.+|+.+++.|+++|+.|++++|+.+++...+. .....+..|.... +.+....+.+ .
T Consensus 76 ~~~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~~~~~d~~~~~v~~~~~~~~d~~~~~~~~~~~~~~ 155 (411)
T KOG1203|consen 76 SKKPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLGVFFVDLGLQNVEADVVTAIDILKKLVEAVPKGVV 155 (411)
T ss_pred CCCCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhcccccccccceeeeccccccchhhhhhhhccccce
Confidence 4457899999999999999999999999999999999887665544 2344444544443 3333333332 3
Q ss_pred EEEECCc---c----------------hHhhhhhhcCCCEEEEEcccccccCCCCccccc-chHHHHHHHHHHHHHHhCC
Q 021928 165 SIICPSE---G----------------FISNAGSLKGVQHVILLSQLSVYRGSGGIQALM-KGNARKLAEQDESMLMASG 224 (305)
Q Consensus 165 ~Vi~~~~---g----------------~~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~-~~~~~~~~~~aE~~l~~~g 224 (305)
+++.+.+ + .+.++|+.+|++|||++|+++.......++.+. ......+++.+|+++++++
T Consensus 156 ~v~~~~ggrp~~ed~~~p~~VD~~g~knlvdA~~~aGvk~~vlv~si~~~~~~~~~~~~~~~~~~~~~k~~~e~~~~~Sg 235 (411)
T KOG1203|consen 156 IVIKGAGGRPEEEDIVTPEKVDYEGTKNLVDACKKAGVKRVVLVGSIGGTKFNQPPNILLLNGLVLKAKLKAEKFLQDSG 235 (411)
T ss_pred eEEecccCCCCcccCCCcceecHHHHHHHHHHHHHhCCceEEEEEeecCcccCCCchhhhhhhhhhHHHHhHHHHHHhcC
Confidence 4443322 1 156778999999999999998876544444443 3456677888999999999
Q ss_pred CCEEEEecCCcccCCCCCcceeee------cCCCCCCccCHHHHHHHHHHHhhCCCCCC-cEEEEecCCc----CHHHHH
Q 021928 225 IPYTIIRTGVLQNTPGGKQGFQFE------EGCAANGSLSKEDAAFICVEALESIPQTG-LIFEVVNGEE----KVSDWK 293 (305)
Q Consensus 225 i~~tilRPg~l~~~~~~~~~~~~~------~~~~~~~~Is~~DvA~~iv~~l~~~~~~~-~~~~v~~g~~----s~~d~~ 293 (305)
++|+|||||.+..+.+........ ..+.....|++.|+|+.+++++.++...+ .+.+++.... .+++|.
T Consensus 236 l~ytiIR~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~vael~~~all~~~~~~~k~~~~v~~~~gpg~~~~~l~ 315 (411)
T KOG1203|consen 236 LPYTIIRPGGLEQDTGGQREVVVDDEKELLTVDGGAYSISRLDVAELVAKALLNEAATFKKVVELVLKPEGPGRPYKVLL 315 (411)
T ss_pred CCcEEEeccccccCCCCcceecccCccccccccccceeeehhhHHHHHHHHHhhhhhccceeEEeecCCCCCCccHHHHH
Confidence 999999999977654433222211 12222248999999999999999888655 5666665332 345555
Q ss_pred HHH
Q 021928 294 KCF 296 (305)
Q Consensus 294 ~~~ 296 (305)
+.+
T Consensus 316 ~~~ 318 (411)
T KOG1203|consen 316 ELF 318 (411)
T ss_pred hhc
Confidence 443
|
|
| >PRK08263 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=7.3e-17 Score=146.19 Aligned_cols=201 Identities=12% Similarity=0.113 Sum_probs=130.8
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh---hcCCCcEEeecCCCCHHHHHHHhc-------CccEEE
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALR-------GVRSII 167 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~---~~~~~v~~v~~D~~d~~~~~~~~~-------~~d~Vi 167 (305)
+++|+||||+|+||++++++|+++|++|++++|++++..+ ..+..+.++.+|++|.+++..+++ ++|+||
T Consensus 3 ~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi 82 (275)
T PRK08263 3 EKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHFGRLDIVV 82 (275)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 4799999999999999999999999999999998766432 234468889999999888776654 569999
Q ss_pred ECCcch--------------------------Hhh----hhhhcCCCEEEEEcccccccCCCCcccccchHHH--HHHHH
Q 021928 168 CPSEGF--------------------------ISN----AGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--KLAEQ 215 (305)
Q Consensus 168 ~~~~g~--------------------------~~~----~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~--~~~~~ 215 (305)
|+++.. +.. .+++.+.+++|++||..++.+......|...++. .+.+.
T Consensus 83 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sKaa~~~~~~~ 162 (275)
T PRK08263 83 NNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQRSGHIIQISSIGGISAFPMSGIYHASKWALEGMSEA 162 (275)
T ss_pred ECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhcCCCCCccHHHHHHHHHHHHHHH
Confidence 884310 111 1345677899999998887665555455443321 11122
Q ss_pred HHHHHHhCCCCEEEEecCCcccCCCC-C----ccee--------eecCCCCCCc-cCHHHHHHHHHHHhhCCCCCCcEEE
Q 021928 216 DESMLMASGIPYTIIRTGVLQNTPGG-K----QGFQ--------FEEGCAANGS-LSKEDAAFICVEALESIPQTGLIFE 281 (305)
Q Consensus 216 aE~~l~~~gi~~tilRPg~l~~~~~~-~----~~~~--------~~~~~~~~~~-Is~~DvA~~iv~~l~~~~~~~~~~~ 281 (305)
....+...+++++++|||++...... . .... +........+ ++++|+|++++.+++.+...++.++
T Consensus 163 la~e~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~dva~~~~~l~~~~~~~~~~~~ 242 (275)
T PRK08263 163 LAQEVAEFGIKVTLVEPGGYSTDWAGTSAKRATPLDAYDTLREELAEQWSERSVDGDPEAAAEALLKLVDAENPPLRLFL 242 (275)
T ss_pred HHHHhhhhCcEEEEEecCCccCCccccccccCCCchhhhhHHHHHHHHHHhccCCCCHHHHHHHHHHHHcCCCCCeEEEe
Confidence 22334457999999999986432210 0 0000 0000111234 8899999999999987766555554
Q ss_pred EecCC-cCHHHHHHHHHH
Q 021928 282 VVNGE-EKVSDWKKCFSR 298 (305)
Q Consensus 282 v~~g~-~s~~d~~~~~~~ 298 (305)
...+. .+..++.+.+.+
T Consensus 243 ~~~~~~~~~~~~~~~~~~ 260 (275)
T PRK08263 243 GSGVLDLAKADYERRLAT 260 (275)
T ss_pred CchHHHHHHHHHHHHHHH
Confidence 44322 345555555544
|
|
| >TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.1e-16 Score=142.54 Aligned_cols=188 Identities=15% Similarity=0.116 Sum_probs=125.2
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh------cCCCcEEeecCCCCHHHHHHH-------hcCccE
Q 021928 99 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTA-------LRGVRS 165 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~~~v~~v~~D~~d~~~~~~~-------~~~~d~ 165 (305)
++||||||+|+||++++++|+++|++|++++|+++..... .+.++.++.+|+.|.+++..+ +.++|.
T Consensus 2 ~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~ 81 (255)
T TIGR01963 2 KTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGGLDI 81 (255)
T ss_pred CEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCCE
Confidence 6899999999999999999999999999999987653221 234688999999998855443 456799
Q ss_pred EEECCcch------------------------------HhhhhhhcCCCEEEEEcccccccCCCCcccccchHHH--HHH
Q 021928 166 IICPSEGF------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--KLA 213 (305)
Q Consensus 166 Vi~~~~g~------------------------------~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~--~~~ 213 (305)
|||+++.. +.+.+++.++++||++||...+.+......|...+.. .+.
T Consensus 82 vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~~~~~~~y~~sk~a~~~~~ 161 (255)
T TIGR01963 82 LVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQGWGRIINIASAHGLVASPFKSAYVAAKHGLIGLT 161 (255)
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhcCCCCCCchhHHHHHHHHHHH
Confidence 99873210 1112355678899999998776554444444443321 111
Q ss_pred HHHHHHHHhCCCCEEEEecCCcccCCC--------CCccee--------eecCCCCCCccCHHHHHHHHHHHhhCCC--C
Q 021928 214 EQDESMLMASGIPYTIIRTGVLQNTPG--------GKQGFQ--------FEEGCAANGSLSKEDAAFICVEALESIP--Q 275 (305)
Q Consensus 214 ~~aE~~l~~~gi~~tilRPg~l~~~~~--------~~~~~~--------~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~ 275 (305)
+.....+...+++++++|||++..... ...... +..+.....+++++|+|++++.++.++. .
T Consensus 162 ~~~~~~~~~~~i~v~~i~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~~~~~~ 241 (255)
T TIGR01963 162 KVLALEVAAHGITVNAICPGYVRTPLVEKQIADQAKTRGIPEEQVIREVMLPGQPTKRFVTVDEVAETALFLASDAAAGI 241 (255)
T ss_pred HHHHHHhhhcCeEEEEEecCccccHHHHHHHHhhhcccCCCchHHHHHHHHccCccccCcCHHHHHHHHHHHcCccccCc
Confidence 111122334689999999999653211 000000 1112233568999999999999997643 3
Q ss_pred CCcEEEEecCC
Q 021928 276 TGLIFEVVNGE 286 (305)
Q Consensus 276 ~~~~~~v~~g~ 286 (305)
.++.|++.+|.
T Consensus 242 ~g~~~~~~~g~ 252 (255)
T TIGR01963 242 TGQAIVLDGGW 252 (255)
T ss_pred cceEEEEcCcc
Confidence 57889998764
|
This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. |
| >PRK13394 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=2.1e-16 Score=141.44 Aligned_cols=189 Identities=16% Similarity=0.093 Sum_probs=127.0
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh------hcCCCcEEeecCCCCHHHHHHHhc-------Cc
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTALR-------GV 163 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~------~~~~~v~~v~~D~~d~~~~~~~~~-------~~ 163 (305)
+++++|||||+|+||++++++|+++|++|+++.|+++...+ ..+..+.++.+|++|.+++.++++ .+
T Consensus 6 ~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 85 (262)
T PRK13394 6 NGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFGSV 85 (262)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 45899999999999999999999999999999998854321 123457889999999988877665 37
Q ss_pred cEEEECCcch------------------------------Hhhhh-hhcCCCEEEEEcccccccCCCCcccccchHHH--
Q 021928 164 RSIICPSEGF------------------------------ISNAG-SLKGVQHVILLSQLSVYRGSGGIQALMKGNAR-- 210 (305)
Q Consensus 164 d~Vi~~~~g~------------------------------~~~~a-~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~-- 210 (305)
|+|||+++.. +.+.+ +..+.++||++||.....+.+....|...+..
T Consensus 86 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~~~iv~~ss~~~~~~~~~~~~y~~sk~a~~ 165 (262)
T PRK13394 86 DILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHEASPLKSAYVTAKHGLL 165 (262)
T ss_pred CEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcCCcEEEEEcchhhcCCCCCCcccHHHHHHHH
Confidence 9999983310 12223 55678899999998776554444444433321
Q ss_pred HHHHHHHHHHHhCCCCEEEEecCCcccCCCCC------c--ce--------eeecCCCCCCccCHHHHHHHHHHHhhCCC
Q 021928 211 KLAEQDESMLMASGIPYTIIRTGVLQNTPGGK------Q--GF--------QFEEGCAANGSLSKEDAAFICVEALESIP 274 (305)
Q Consensus 211 ~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~------~--~~--------~~~~~~~~~~~Is~~DvA~~iv~~l~~~~ 274 (305)
.+.+.....+...++.++++|||.+....... . .. .+..+.....+++++|+|+++..++..+.
T Consensus 166 ~~~~~la~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~~~l~~~~~ 245 (262)
T PRK13394 166 GLARVLAKEGAKHNVRSHVVCPGFVRTPLVDKQIPEQAKELGISEEEVVKKVMLGKTVDGVFTTVEDVAQTVLFLSSFPS 245 (262)
T ss_pred HHHHHHHHHhhhcCeEEEEEeeCcccchhhhhhhHhhhhccCCChHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHcCccc
Confidence 11111112233468999999999855321100 0 00 01112234578999999999999997653
Q ss_pred --CCCcEEEEecC
Q 021928 275 --QTGLIFEVVNG 285 (305)
Q Consensus 275 --~~~~~~~v~~g 285 (305)
..++.|++.+|
T Consensus 246 ~~~~g~~~~~~~g 258 (262)
T PRK13394 246 AALTGQSFVVSHG 258 (262)
T ss_pred cCCcCCEEeeCCc
Confidence 34788988876
|
|
| >PRK07825 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.8e-16 Score=143.27 Aligned_cols=174 Identities=14% Similarity=0.113 Sum_probs=123.3
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcC--CCcEEeecCCCCHHHHHHHh-------cCccEEE
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG--TYVESMAGDASNKKFLKTAL-------RGVRSII 167 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~--~~v~~v~~D~~d~~~~~~~~-------~~~d~Vi 167 (305)
.+++|+||||+|+||++++++|+++|++|+++.|++++..+... ..+.++.+|++|.+++.+++ .++|.+|
T Consensus 4 ~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li 83 (273)
T PRK07825 4 RGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELGLVVGGPLDVTDPASFAAFLDAVEADLGPIDVLV 83 (273)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 35899999999999999999999999999999998866433211 24788999999988876555 3569999
Q ss_pred ECCcc----h--------------------------HhhhhhhcCCCEEEEEcccccccCCCCcccccchHH--HHHHHH
Q 021928 168 CPSEG----F--------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA--RKLAEQ 215 (305)
Q Consensus 168 ~~~~g----~--------------------------~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~--~~~~~~ 215 (305)
++++. . +...+.+.+.++||++||.....+.++...|..++. ..+.+.
T Consensus 84 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~ 163 (273)
T PRK07825 84 NNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGRGHVVNVASLAGKIPVPGMATYCASKHAVVGFTDA 163 (273)
T ss_pred ECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCccccCCCCCCcchHHHHHHHHHHHHH
Confidence 88431 0 112234567789999999988766655555654432 223334
Q ss_pred HHHHHHhCCCCEEEEecCCcccCCCCCcceeeecCCCCCCccCHHHHHHHHHHHhhCCCC
Q 021928 216 DESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQ 275 (305)
Q Consensus 216 aE~~l~~~gi~~tilRPg~l~~~~~~~~~~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~~ 275 (305)
....++..++++++|+||++........ ........++++|+|+.++.++.++..
T Consensus 164 l~~el~~~gi~v~~v~Pg~v~t~~~~~~-----~~~~~~~~~~~~~va~~~~~~l~~~~~ 218 (273)
T PRK07825 164 ARLELRGTGVHVSVVLPSFVNTELIAGT-----GGAKGFKNVEPEDVAAAIVGTVAKPRP 218 (273)
T ss_pred HHHHhhccCcEEEEEeCCcCcchhhccc-----ccccCCCCCCHHHHHHHHHHHHhCCCC
Confidence 4445667899999999999754322111 011223578999999999999987653
|
|
| >PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed | Back alignment and domain information |
|---|
Probab=99.73 E-value=3e-16 Score=139.27 Aligned_cols=191 Identities=17% Similarity=0.155 Sum_probs=127.5
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh------cCCCcEEeecCCCCHHHHHHHhc-------Cc
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GV 163 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~~~v~~v~~D~~d~~~~~~~~~-------~~ 163 (305)
++++|+||||+|+||++++++|+++|++|++++|++++.... ...++.++.+|+.|.+++.++++ .+
T Consensus 5 ~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 84 (251)
T PRK12826 5 EGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFGRL 84 (251)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 458999999999999999999999999999999986542211 12358899999999998888775 57
Q ss_pred cEEEECCcch--------------------------Hhhh----hhhcCCCEEEEEcccccc-cCCCCcccccchHH--H
Q 021928 164 RSIICPSEGF--------------------------ISNA----GSLKGVQHVILLSQLSVY-RGSGGIQALMKGNA--R 210 (305)
Q Consensus 164 d~Vi~~~~g~--------------------------~~~~----a~~~gv~~~V~iSS~~~~-~~~~~~~~~~~~~~--~ 210 (305)
|+|||+++.. +... +++.+.++||++||..++ .+......|...+. .
T Consensus 85 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~ss~~~~~~~~~~~~~y~~sK~a~~ 164 (251)
T PRK12826 85 DILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGGGRIVLTSSVAGPRVGYPGLAHYAASKAGLV 164 (251)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechHhhccCCCCccHHHHHHHHHH
Confidence 9999883210 1111 234567899999998776 33333333433221 1
Q ss_pred HHHHHHHHHHHhCCCCEEEEecCCcccCCCCC-cc----eeeecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEEEEe
Q 021928 211 KLAEQDESMLMASGIPYTIIRTGVLQNTPGGK-QG----FQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVV 283 (305)
Q Consensus 211 ~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~-~~----~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~v~ 283 (305)
.+.+.....+...+++++++|||.+.+..... .. ..+........+++.+|+|++++.++..+. ..|+.|++.
T Consensus 165 ~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~ 244 (251)
T PRK12826 165 GFTRALALELAARNITVNSVHPGGVDTPMAGNLGDAQWAEAIAAAIPLGRLGEPEDIAAAVLFLASDEARYITGQTLPVD 244 (251)
T ss_pred HHHHHHHHHHHHcCeEEEEEeeCCCCcchhhhcCchHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCcCCcEEEEC
Confidence 11122223344579999999999975432111 00 001111122367899999999999887554 358999998
Q ss_pred cCCc
Q 021928 284 NGEE 287 (305)
Q Consensus 284 ~g~~ 287 (305)
+|..
T Consensus 245 ~g~~ 248 (251)
T PRK12826 245 GGAT 248 (251)
T ss_pred CCcc
Confidence 7654
|
|
| >COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.72 E-value=4.3e-16 Score=140.17 Aligned_cols=183 Identities=18% Similarity=0.182 Sum_probs=139.7
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCc--cEEEECCcc----
Q 021928 99 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGV--RSIICPSEG---- 172 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~--d~Vi~~~~g---- 172 (305)
|+|||||++|.+|.+|+++|. .+++|++++|.. .|++|.+.+.++++.. |+|||+++-
T Consensus 1 M~iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~~---------------~Ditd~~~v~~~i~~~~PDvVIn~AAyt~vD 64 (281)
T COG1091 1 MKILITGANGQLGTELRRALP-GEFEVIATDRAE---------------LDITDPDAVLEVIRETRPDVVINAAAYTAVD 64 (281)
T ss_pred CcEEEEcCCChHHHHHHHHhC-CCceEEeccCcc---------------ccccChHHHHHHHHhhCCCEEEECccccccc
Confidence 459999999999999999999 779999998876 8999999999999865 999998431
Q ss_pred ------------------hHhhhhhhcCCCEEEEEcccccccCCCC--------cccccchHHHHHHHHHHHHHHhCCCC
Q 021928 173 ------------------FISNAGSLKGVQHVILLSQLSVYRGSGG--------IQALMKGNARKLAEQDESMLMASGIP 226 (305)
Q Consensus 173 ------------------~~~~~a~~~gv~~~V~iSS~~~~~~~~~--------~~~~~~~~~~~~~~~aE~~l~~~gi~ 226 (305)
.++.+|++.|. ++|++||..++++..+ ..+..-| -+.|...|+.+++.+-.
T Consensus 65 ~aE~~~e~A~~vNa~~~~~lA~aa~~~ga-~lVhiSTDyVFDG~~~~~Y~E~D~~~P~nvY--G~sKl~GE~~v~~~~~~ 141 (281)
T COG1091 65 KAESEPELAFAVNATGAENLARAAAEVGA-RLVHISTDYVFDGEKGGPYKETDTPNPLNVY--GRSKLAGEEAVRAAGPR 141 (281)
T ss_pred cccCCHHHHHHhHHHHHHHHHHHHHHhCC-eEEEeecceEecCCCCCCCCCCCCCCChhhh--hHHHHHHHHHHHHhCCC
Confidence 15566777887 7999999988765331 2222222 22356789999999999
Q ss_pred EEEEecCCcccCCC------------CCcceeeecCCCCCCccCHHHHHHHHHHHhhCCCCCCcEEEEecC-CcCHHHHH
Q 021928 227 YTIIRTGVLQNTPG------------GKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVVNG-EEKVSDWK 293 (305)
Q Consensus 227 ~tilRPg~l~~~~~------------~~~~~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~~~~~~~~v~~g-~~s~~d~~ 293 (305)
.+|+|.+|+....+ .++.+. -..++....++.+|+|+++.+++......+ +|++++. ..|+-|+.
T Consensus 142 ~~I~Rtswv~g~~g~nFv~tml~la~~~~~l~-vv~Dq~gsPt~~~dlA~~i~~ll~~~~~~~-~yH~~~~g~~Swydfa 219 (281)
T COG1091 142 HLILRTSWVYGEYGNNFVKTMLRLAKEGKELK-VVDDQYGSPTYTEDLADAILELLEKEKEGG-VYHLVNSGECSWYEFA 219 (281)
T ss_pred EEEEEeeeeecCCCCCHHHHHHHHhhcCCceE-EECCeeeCCccHHHHHHHHHHHHhccccCc-EEEEeCCCcccHHHHH
Confidence 99999999765543 122222 245566778999999999999998665433 9999984 45889998
Q ss_pred HHHHHhhhh
Q 021928 294 KCFSRLMEK 302 (305)
Q Consensus 294 ~~~~~l~~~ 302 (305)
+.+.+..+.
T Consensus 220 ~~I~~~~~~ 228 (281)
T COG1091 220 KAIFEEAGV 228 (281)
T ss_pred HHHHHHhCC
Confidence 888877663
|
|
| >PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=2.8e-16 Score=139.58 Aligned_cols=189 Identities=15% Similarity=0.117 Sum_probs=127.4
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh---c--CCCcEEeecCCCCHHHHHHHhc-------Ccc
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---F--GTYVESMAGDASNKKFLKTALR-------GVR 164 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~--~~~v~~v~~D~~d~~~~~~~~~-------~~d 164 (305)
.+++|+||||+|+||++++++|+++|++|++++|++++..+. . +.++.++.+|+.|.+++..+++ .+|
T Consensus 4 ~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 83 (251)
T PRK07231 4 EGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERFGSVD 83 (251)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence 358999999999999999999999999999999998653321 1 2357899999999999887765 469
Q ss_pred EEEECCcch-------------------------------HhhhhhhcCCCEEEEEcccccccCCCCcccccchHHH--H
Q 021928 165 SIICPSEGF-------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--K 211 (305)
Q Consensus 165 ~Vi~~~~g~-------------------------------~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~--~ 211 (305)
+|||+++.. +...+++.+.++||++||..++.+..+...|...+.. .
T Consensus 84 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~~sk~~~~~ 163 (251)
T PRK07231 84 ILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAIVNVASTAGLRPRPGLGWYNASKGAVIT 163 (251)
T ss_pred EEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcCCCCCchHHHHHHHHHHH
Confidence 999883310 1112334567899999999887766655555443321 1
Q ss_pred HHHHHHHHHHhCCCCEEEEecCCcccCCCCC--------cceeeecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEEE
Q 021928 212 LAEQDESMLMASGIPYTIIRTGVLQNTPGGK--------QGFQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFE 281 (305)
Q Consensus 212 ~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~--------~~~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~ 281 (305)
+.+.....+...+++++.++||++....... ....+........+++++|+|.+++.++..+. ..++.+.
T Consensus 164 ~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~ 243 (251)
T PRK07231 164 LTKALAAELGPDKIRVNAVAPVVVETGLLEAFMGEPTPENRAKFLATIPLGRLGTPEDIANAALFLASDEASWITGVTLV 243 (251)
T ss_pred HHHHHHHHhhhhCeEEEEEEECccCCCcchhhhcccChHHHHHHhcCCCCCCCcCHHHHHHHHHHHhCccccCCCCCeEE
Confidence 1122222233458999999999864322110 00001112223457899999999999997554 3477777
Q ss_pred EecC
Q 021928 282 VVNG 285 (305)
Q Consensus 282 v~~g 285 (305)
+.+|
T Consensus 244 ~~gg 247 (251)
T PRK07231 244 VDGG 247 (251)
T ss_pred ECCC
Confidence 7755
|
|
| >PRK06182 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.72 E-value=4.1e-16 Score=141.04 Aligned_cols=187 Identities=12% Similarity=0.063 Sum_probs=123.0
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhc-------CccEEEECC
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR-------GVRSIICPS 170 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~-------~~d~Vi~~~ 170 (305)
+++|+||||+|+||++++++|+++|++|+++.|++++..+....+++++.+|++|.+++.++++ ++|++|+++
T Consensus 3 ~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~li~~a 82 (273)
T PRK06182 3 KKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLASLGVHPLSLDVTDEASIKAAVDTIIAEEGRIDVLVNNA 82 (273)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECC
Confidence 5899999999999999999999999999999999876554444468999999999998887775 689999884
Q ss_pred cc----h--------------------------HhhhhhhcCCCEEEEEcccccccCCCCcccccchHHH--HHHHHHHH
Q 021928 171 EG----F--------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--KLAEQDES 218 (305)
Q Consensus 171 ~g----~--------------------------~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~--~~~~~aE~ 218 (305)
+. . +...+++.+.++||++||.....+.+....|...+.. .+.+....
T Consensus 83 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaa~~~~~~~l~~ 162 (273)
T PRK06182 83 GYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQRSGRIINISSMGGKIYTPLGAWYHATKFALEGFSDALRL 162 (273)
T ss_pred CcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhcCCCCCccHhHHHHHHHHHHHHHHHH
Confidence 31 0 1122345667899999998765443333334332221 11111222
Q ss_pred HHHhCCCCEEEEecCCcccCCCC--Cccee-------e-----------ecCCCCCCccCHHHHHHHHHHHhhCCCCCCc
Q 021928 219 MLMASGIPYTIIRTGVLQNTPGG--KQGFQ-------F-----------EEGCAANGSLSKEDAAFICVEALESIPQTGL 278 (305)
Q Consensus 219 ~l~~~gi~~tilRPg~l~~~~~~--~~~~~-------~-----------~~~~~~~~~Is~~DvA~~iv~~l~~~~~~~~ 278 (305)
.+...++++++++||++...... ..... + ..........+++|+|++++.++..... ..
T Consensus 163 e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vA~~i~~~~~~~~~-~~ 241 (273)
T PRK06182 163 EVAPFGIDVVVIEPGGIKTEWGDIAADHLLKTSGNGAYAEQAQAVAASMRSTYGSGRLSDPSVIADAISKAVTARRP-KT 241 (273)
T ss_pred HhcccCCEEEEEecCCcccccchhhhhhhcccccccchHHHHHHHHHHHHHhhccccCCCHHHHHHHHHHHHhCCCC-Cc
Confidence 34567999999999996533210 00000 0 0000112456899999999999975322 33
Q ss_pred EEEEecC
Q 021928 279 IFEVVNG 285 (305)
Q Consensus 279 ~~~v~~g 285 (305)
.|.+..+
T Consensus 242 ~~~~g~~ 248 (273)
T PRK06182 242 RYAVGFG 248 (273)
T ss_pred eeecCcc
Confidence 5555434
|
|
| >PRK06180 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=9.6e-16 Score=139.09 Aligned_cols=178 Identities=13% Similarity=0.099 Sum_probs=118.9
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh---cCCCcEEeecCCCCHHHHHHHhc-------CccEEE
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALR-------GVRSII 167 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~~~~v~~v~~D~~d~~~~~~~~~-------~~d~Vi 167 (305)
+++|+||||+|+||++++++|+++|++|++++|++++.... .+.++.++.+|++|.+++.++++ ++|+||
T Consensus 4 ~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d~vv 83 (277)
T PRK06180 4 MKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEALHPDRALARLLDVTDFDAIDAVVADAEATFGPIDVLV 83 (277)
T ss_pred CCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCCCEEE
Confidence 47899999999999999999999999999999988664332 23468889999999988877765 479999
Q ss_pred ECCcch--------------------------Hhhh----hhhcCCCEEEEEcccccccCCCCcccccchHHH--HHHHH
Q 021928 168 CPSEGF--------------------------ISNA----GSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--KLAEQ 215 (305)
Q Consensus 168 ~~~~g~--------------------------~~~~----a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~--~~~~~ 215 (305)
|+++.. +.++ +++.+.++||++||.++..+.++...|...++. .+.+.
T Consensus 84 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iSS~~~~~~~~~~~~Y~~sK~a~~~~~~~ 163 (277)
T PRK06180 84 NNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITSMGGLITMPGIGYYCGSKFALEGISES 163 (277)
T ss_pred ECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEecccccCCCCCcchhHHHHHHHHHHHHH
Confidence 884310 1111 234556799999998877655555555443321 11122
Q ss_pred HHHHHHhCCCCEEEEecCCcccCC-CCCcc---eeee-------------cCCCCCCccCHHHHHHHHHHHhhCCCC
Q 021928 216 DESMLMASGIPYTIIRTGVLQNTP-GGKQG---FQFE-------------EGCAANGSLSKEDAAFICVEALESIPQ 275 (305)
Q Consensus 216 aE~~l~~~gi~~tilRPg~l~~~~-~~~~~---~~~~-------------~~~~~~~~Is~~DvA~~iv~~l~~~~~ 275 (305)
....+...++++++++||++.... ..... .... .......+.+++|+|++++.+++++..
T Consensus 164 la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~l~~~~~ 240 (277)
T PRK06180 164 LAKEVAPFGIHVTAVEPGSFRTDWAGRSMVRTPRSIADYDALFGPIRQAREAKSGKQPGDPAKAAQAILAAVESDEP 240 (277)
T ss_pred HHHHhhhhCcEEEEEecCCcccCccccccccCCCCcHhHHHHHHHHHHHHHhhccCCCCCHHHHHHHHHHHHcCCCC
Confidence 222334579999999999964321 10000 0000 001123467899999999999986543
|
|
| >PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.72 E-value=3.1e-16 Score=138.51 Aligned_cols=190 Identities=14% Similarity=0.117 Sum_probs=126.6
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh------cCCCcEEeecCCCCHHHHHHHhcC-------c
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALRG-------V 163 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~~~v~~v~~D~~d~~~~~~~~~~-------~ 163 (305)
++++|+||||+|+||++++++|+++|++|+++.|++.+.... .+.++.++.+|+.|.+++.+++++ +
T Consensus 4 ~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 83 (246)
T PRK05653 4 QGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFGAL 83 (246)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 458999999999999999999999999999999987653211 234688899999999888776654 5
Q ss_pred cEEEECCcch--------------------------Hhhh----hhhcCCCEEEEEcccccccCCCCcccccchHH--HH
Q 021928 164 RSIICPSEGF--------------------------ISNA----GSLKGVQHVILLSQLSVYRGSGGIQALMKGNA--RK 211 (305)
Q Consensus 164 d~Vi~~~~g~--------------------------~~~~----a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~--~~ 211 (305)
|+|||+++.. +... ..+.++++||++||.....+......|...+. ..
T Consensus 84 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~ss~~~~~~~~~~~~y~~sk~~~~~ 163 (246)
T PRK05653 84 DILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNISSVSGVTGNPGQTNYSAAKAGVIG 163 (246)
T ss_pred CEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhccCCCCCcHhHhHHHHHHH
Confidence 9999884310 1111 23567789999999876554444444433221 11
Q ss_pred HHHHHHHHHHhCCCCEEEEecCCcccCCCCC-ccee---eecCCCCCCccCHHHHHHHHHHHhhCC--CCCCcEEEEecC
Q 021928 212 LAEQDESMLMASGIPYTIIRTGVLQNTPGGK-QGFQ---FEEGCAANGSLSKEDAAFICVEALESI--PQTGLIFEVVNG 285 (305)
Q Consensus 212 ~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~-~~~~---~~~~~~~~~~Is~~DvA~~iv~~l~~~--~~~~~~~~v~~g 285 (305)
..+.....+...++.++++|||.+....... .... .........+++++|+|++++.++... ...++.|++.+|
T Consensus 164 ~~~~l~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~~~~~~g~~~~~~gg 243 (246)
T PRK05653 164 FTKALALELASRGITVNAVAPGFIDTDMTEGLPEEVKAEILKEIPLGRLGQPEEVANAVAFLASDAASYITGQVIPVNGG 243 (246)
T ss_pred HHHHHHHHHhhcCeEEEEEEeCCcCCcchhhhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCccCCEEEeCCC
Confidence 1122223344578999999999865432211 0000 001112245688899999999999653 346889999887
Q ss_pred C
Q 021928 286 E 286 (305)
Q Consensus 286 ~ 286 (305)
.
T Consensus 244 ~ 244 (246)
T PRK05653 244 M 244 (246)
T ss_pred e
Confidence 4
|
|
| >PRK09291 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=3e-16 Score=140.15 Aligned_cols=177 Identities=15% Similarity=0.074 Sum_probs=120.1
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh------hcCCCcEEeecCCCCHHHHHHHhc-CccEEEECC
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTALR-GVRSIICPS 170 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~------~~~~~v~~v~~D~~d~~~~~~~~~-~~d~Vi~~~ 170 (305)
+++||||||+|+||++++++|+++|++|++++|++.+..+ ..+.++.++.+|+.|.+++.+++. ++|+|||++
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~id~vi~~a 81 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAEWDVDVLLNNA 81 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhcCCCCEEEECC
Confidence 5799999999999999999999999999999998755322 123468899999999999998887 799999874
Q ss_pred cch------------------------------HhhhhhhcCCCEEEEEcccccccCCCCcccccchHH--HHHHHHHHH
Q 021928 171 EGF------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA--RKLAEQDES 218 (305)
Q Consensus 171 ~g~------------------------------~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~--~~~~~~aE~ 218 (305)
+.. ....+.+.+.++||++||..+..+......|..++. ..+.+..+.
T Consensus 82 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~ 161 (257)
T PRK09291 82 GIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARGKGKVVFTSSMAGLITGPFTGAYCASKHALEAIAEAMHA 161 (257)
T ss_pred CcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEcChhhccCCCCcchhHHHHHHHHHHHHHHHH
Confidence 310 112234556789999999876655444444543322 111222334
Q ss_pred HHHhCCCCEEEEecCCcccCCCCC-----cc--------eeeecCCCCCCccCHHHHHHHHHHHhhCCC
Q 021928 219 MLMASGIPYTIIRTGVLQNTPGGK-----QG--------FQFEEGCAANGSLSKEDAAFICVEALESIP 274 (305)
Q Consensus 219 ~l~~~gi~~tilRPg~l~~~~~~~-----~~--------~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~ 274 (305)
.+...++++++||||++..+.... .. +.........+.++.+|+++.++.++..+.
T Consensus 162 ~~~~~gi~~~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 230 (257)
T PRK09291 162 ELKPFGIQVATVNPGPYLTGFNDTMAETPKRWYDPARNFTDPEDLAFPLEQFDPQEMIDAMVEVIPADT 230 (257)
T ss_pred HHHhcCcEEEEEecCcccccchhhhhhhhhhhcchhhHHHhhhhhhccccCCCHHHHHHHHHHHhcCCC
Confidence 455689999999999964322100 00 000011122356789999999999987654
|
|
| >KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.71 E-value=8.6e-16 Score=142.77 Aligned_cols=203 Identities=17% Similarity=0.186 Sum_probs=140.2
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCC--CeEEEEEcCcch---hhhhc---CCCcEEeecCCCCHHHHHHHhcCccEEEE
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRN---AMESF---GTYVESMAGDASNKKFLKTALRGVRSIIC 168 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g--~~V~~~~R~~~~---~~~~~---~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~ 168 (305)
++.+++||||+||+|++++++|++++ .+|++++..+.. ..+.. ...++++.+|+.|...+..+++++ .|+|
T Consensus 3 ~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~~~~~~v~~~~~D~~~~~~i~~a~~~~-~Vvh 81 (361)
T KOG1430|consen 3 KKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTGFRSGRVTVILGDLLDANSISNAFQGA-VVVH 81 (361)
T ss_pred cCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhcccCCceeEEecchhhhhhhhhhccCc-eEEE
Confidence 45899999999999999999999998 799999888753 12222 457999999999999999999999 6665
Q ss_pred C-Ccc---------------------hHhhhhhhcCCCEEEEEcccccccCCCC--------cccccc-hHHHHHHHHHH
Q 021928 169 P-SEG---------------------FISNAGSLKGVQHVILLSQLSVYRGSGG--------IQALMK-GNARKLAEQDE 217 (305)
Q Consensus 169 ~-~~g---------------------~~~~~a~~~gv~~~V~iSS~~~~~~~~~--------~~~~~~-~~~~~~~~~aE 217 (305)
+ +.. .+.++|.+.+|+++||+||..+..+... +.+... ..+.+-|..+|
T Consensus 82 ~aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~~v~~lIYtSs~~Vvf~g~~~~n~~E~~p~p~~~~d~Y~~sKa~aE 161 (361)
T KOG1430|consen 82 CAASPVPDFVENDRDLAMRVNVNGTLNVIEACKELGVKRLIYTSSAYVVFGGEPIINGDESLPYPLKHIDPYGESKALAE 161 (361)
T ss_pred eccccCccccccchhhheeecchhHHHHHHHHHHhCCCEEEEecCceEEeCCeecccCCCCCCCccccccccchHHHHHH
Confidence 5 221 1567899999999999999988653221 011100 01222355678
Q ss_pred HHHHhC----CCCEEEEecCCcccC-CC------------CCcceeeecCCCCCCccCHHHHHHHHHHHhh-----CCCC
Q 021928 218 SMLMAS----GIPYTIIRTGVLQNT-PG------------GKQGFQFEEGCAANGSLSKEDAAFICVEALE-----SIPQ 275 (305)
Q Consensus 218 ~~l~~~----gi~~tilRPg~l~~~-~~------------~~~~~~~~~~~~~~~~Is~~DvA~~iv~~l~-----~~~~ 275 (305)
+++++. ++..++|||..+++. .. ..-.+..+.++...++++.+.||.+.+.+.. .+..
T Consensus 162 ~~Vl~an~~~~l~T~aLR~~~IYGpgd~~~~~~i~~~~~~g~~~f~~g~~~~~~~~~~~~Nva~ahilA~~aL~~~~~~~ 241 (361)
T KOG1430|consen 162 KLVLEANGSDDLYTCALRPPGIYGPGDKRLLPKIVEALKNGGFLFKIGDGENLNDFTYGENVAWAHILAARALLDKSPSV 241 (361)
T ss_pred HHHHHhcCCCCeeEEEEccccccCCCCccccHHHHHHHHccCceEEeeccccccceEEechhHHHHHHHHHHHHhcCCcc
Confidence 887753 378999999885533 22 1122333444555778888878777775432 3446
Q ss_pred CCcEEEEecCCc--CHHHHHHHHHHhhh
Q 021928 276 TGLIFEVVNGEE--KVSDWKKCFSRLME 301 (305)
Q Consensus 276 ~~~~~~v~~g~~--s~~d~~~~~~~l~~ 301 (305)
.|+.|.|+++.. ++..|. .+....+
T Consensus 242 ~Gq~yfI~d~~p~~~~~~~~-~l~~~lg 268 (361)
T KOG1430|consen 242 NGQFYFITDDTPVRFFDFLS-PLVKALG 268 (361)
T ss_pred CceEEEEeCCCcchhhHHHH-HHHHhcC
Confidence 899999999763 455555 4444333
|
|
| >PRK06138 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.2e-15 Score=135.80 Aligned_cols=189 Identities=14% Similarity=0.094 Sum_probs=125.6
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh-----cCCCcEEeecCCCCHHHHHHHhc-------Ccc
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-----FGTYVESMAGDASNKKFLKTALR-------GVR 164 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~-----~~~~v~~v~~D~~d~~~~~~~~~-------~~d 164 (305)
.+++++||||+|+||++++++|+++|++|+++.|+.+...+. .+.++.++.+|++|.+++.++++ ++|
T Consensus 4 ~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id 83 (252)
T PRK06138 4 AGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARWGRLD 83 (252)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 458999999999999999999999999999999987653221 13457899999999988887765 679
Q ss_pred EEEECCcch------------------------------HhhhhhhcCCCEEEEEcccccccCCCCcccccchHHHH--H
Q 021928 165 SIICPSEGF------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK--L 212 (305)
Q Consensus 165 ~Vi~~~~g~------------------------------~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~~--~ 212 (305)
+|||+++.. +..++++.+.++||++||.....+......|...+... +
T Consensus 84 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~sK~a~~~~ 163 (252)
T PRK06138 84 VLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQGGGSIVNTASQLALAGGRGRAAYVASKGAIASL 163 (252)
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCCccHHHHHHHHHHHH
Confidence 999983310 11123456778999999987765544444554433211 1
Q ss_pred HHHHHHHHHhCCCCEEEEecCCcccCCCCCc------ce----eeecCCCCCCccCHHHHHHHHHHHhhCCCC--CCcEE
Q 021928 213 AEQDESMLMASGIPYTIIRTGVLQNTPGGKQ------GF----QFEEGCAANGSLSKEDAAFICVEALESIPQ--TGLIF 280 (305)
Q Consensus 213 ~~~aE~~l~~~gi~~tilRPg~l~~~~~~~~------~~----~~~~~~~~~~~Is~~DvA~~iv~~l~~~~~--~~~~~ 280 (305)
.+.....+...+++++.++||++.+...... .. ..........+++++|+|++++.++.++.. .|..+
T Consensus 164 ~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~ 243 (252)
T PRK06138 164 TRAMALDHATDGIRVNAVAPGTIDTPYFRRIFARHADPEALREALRARHPMNRFGTAEEVAQAALFLASDESSFATGTTL 243 (252)
T ss_pred HHHHHHHHHhcCeEEEEEEECCccCcchhhhhccccChHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCccCCEE
Confidence 1111122344689999999998643321100 00 000011123478999999999999987652 46777
Q ss_pred EEecC
Q 021928 281 EVVNG 285 (305)
Q Consensus 281 ~v~~g 285 (305)
.+.+|
T Consensus 244 ~~~~g 248 (252)
T PRK06138 244 VVDGG 248 (252)
T ss_pred EECCC
Confidence 77655
|
|
| >PRK07454 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=8.6e-16 Score=136.14 Aligned_cols=176 Identities=15% Similarity=0.104 Sum_probs=120.0
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh------cCCCcEEeecCCCCHHHHHHHhc-------Cc
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GV 163 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~~~v~~v~~D~~d~~~~~~~~~-------~~ 163 (305)
.+++++||||+|+||++++++|+++|++|++++|++++..+. .+.++.++.+|++|.+++.++++ .+
T Consensus 5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 84 (241)
T PRK07454 5 SMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFGCP 84 (241)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 358999999999999999999999999999999987653221 12468899999999988877665 47
Q ss_pred cEEEECCcch------------------------------HhhhhhhcCCCEEEEEcccccccCCCCcccccchHHH--H
Q 021928 164 RSIICPSEGF------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--K 211 (305)
Q Consensus 164 d~Vi~~~~g~------------------------------~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~--~ 211 (305)
|++|++++.. +...+.+.+.++||++||...+.+......|...+.. .
T Consensus 85 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~~~~~ 164 (241)
T PRK07454 85 DVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGGGLIINVSSIAARNAFPQWGAYCVSKAALAA 164 (241)
T ss_pred CEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCcCCCCccHHHHHHHHHHH
Confidence 9999884310 1112234556799999999887665555555433221 1
Q ss_pred HHHHHHHHHHhCCCCEEEEecCCcccCCCCCcceeeecCCCCCCccCHHHHHHHHHHHhhCCC
Q 021928 212 LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIP 274 (305)
Q Consensus 212 ~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~~~~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~ 274 (305)
..+.....+...++++++||||++........... ........++++|+|++++.++.++.
T Consensus 165 ~~~~~a~e~~~~gi~v~~i~pg~i~t~~~~~~~~~--~~~~~~~~~~~~~va~~~~~l~~~~~ 225 (241)
T PRK07454 165 FTKCLAEEERSHGIRVCTITLGAVNTPLWDTETVQ--ADFDRSAMLSPEQVAQTILHLAQLPP 225 (241)
T ss_pred HHHHHHHHhhhhCCEEEEEecCcccCCcccccccc--cccccccCCCHHHHHHHHHHHHcCCc
Confidence 11112223345799999999999654322111110 11112356899999999999998764
|
|
| >PRK09186 flagellin modification protein A; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=4.3e-16 Score=139.07 Aligned_cols=188 Identities=15% Similarity=0.122 Sum_probs=120.6
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh-------c-CCCcEEeecCCCCHHHHHHHhcC-------
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------F-GTYVESMAGDASNKKFLKTALRG------- 162 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~-------~-~~~v~~v~~D~~d~~~~~~~~~~------- 162 (305)
+|+|+||||+|+||++++++|+++|++|+++.|++++..+. . ...+.++.+|++|.+++.++++.
T Consensus 4 ~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~ 83 (256)
T PRK09186 4 GKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKYGK 83 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 58999999999999999999999999999999987653221 1 12456779999999888877763
Q ss_pred ccEEEECCcch---------------------------------HhhhhhhcCCCEEEEEcccccccCCC----------
Q 021928 163 VRSIICPSEGF---------------------------------ISNAGSLKGVQHVILLSQLSVYRGSG---------- 199 (305)
Q Consensus 163 ~d~Vi~~~~g~---------------------------------~~~~a~~~gv~~~V~iSS~~~~~~~~---------- 199 (305)
+|+|||+++.. +...+++.+.++||++||..+.....
T Consensus 84 id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~ 163 (256)
T PRK09186 84 IDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQGGGNLVNISSIYGVVAPKFEIYEGTSMT 163 (256)
T ss_pred ccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCceEEEEechhhhccccchhccccccC
Confidence 79999874210 11123445678999999976543211
Q ss_pred CcccccchHH--HHHHHHHHHHHHhCCCCEEEEecCCcccCCCCCcceeeecCCCCCCccCHHHHHHHHHHHhhCCC--C
Q 021928 200 GIQALMKGNA--RKLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIP--Q 275 (305)
Q Consensus 200 ~~~~~~~~~~--~~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~~~~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~ 275 (305)
....|..++. ..+.+.....+...++++++++||.+.+.........+.........++++|+|++++.++.+.. .
T Consensus 164 ~~~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~ 243 (256)
T PRK09186 164 SPVEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGILDNQPEAFLNAYKKCCNGKGMLDPDDICGTLVFLLSDQSKYI 243 (256)
T ss_pred CcchhHHHHHHHHHHHHHHHHHhCcCCeEEEEEecccccCCCCHHHHHHHHhcCCccCCCCHHHhhhhHhheeccccccc
Confidence 0112322221 11111112223347899999999986433211000000011123467999999999999997554 3
Q ss_pred CCcEEEEecC
Q 021928 276 TGLIFEVVNG 285 (305)
Q Consensus 276 ~~~~~~v~~g 285 (305)
.++.+.+.+|
T Consensus 244 ~g~~~~~~~g 253 (256)
T PRK09186 244 TGQNIIVDDG 253 (256)
T ss_pred cCceEEecCC
Confidence 5777777766
|
|
| >PRK07326 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.7e-15 Score=133.64 Aligned_cols=186 Identities=19% Similarity=0.192 Sum_probs=123.8
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh---cC--CCcEEeecCCCCHHHHHHHhc-------Ccc
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FG--TYVESMAGDASNKKFLKTALR-------GVR 164 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~~--~~v~~v~~D~~d~~~~~~~~~-------~~d 164 (305)
++++|+||||+|+||++++++|+++|++|++++|++++..+. +. .+++++.+|+.|.+++.++++ ++|
T Consensus 5 ~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 84 (237)
T PRK07326 5 KGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAFGGLD 84 (237)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 358999999999999999999999999999999987653322 11 468899999999988877665 689
Q ss_pred EEEECCcch--------------------------Hhhhhh---hcCCCEEEEEcccccccCCCCcccccchHH--HHHH
Q 021928 165 SIICPSEGF--------------------------ISNAGS---LKGVQHVILLSQLSVYRGSGGIQALMKGNA--RKLA 213 (305)
Q Consensus 165 ~Vi~~~~g~--------------------------~~~~a~---~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~--~~~~ 213 (305)
+|||+++.. +..++. ..+.++||++||.....+......|...++ ..+.
T Consensus 85 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~y~~sk~a~~~~~ 164 (237)
T PRK07326 85 VLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRGGGYIINISSLAGTNFFAGGAAYNASKFGLVGFS 164 (237)
T ss_pred EEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHCCeEEEEECChhhccCCCCCchHHHHHHHHHHHH
Confidence 999873210 111111 234578999999876655444444433222 1111
Q ss_pred HHHHHHHHhCCCCEEEEecCCcccCCCCCcceeeecCCCCCCccCHHHHHHHHHHHhhCCC-CCCcEEEEecCCc
Q 021928 214 EQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIP-QTGLIFEVVNGEE 287 (305)
Q Consensus 214 ~~aE~~l~~~gi~~tilRPg~l~~~~~~~~~~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~-~~~~~~~v~~g~~ 287 (305)
+.....++..+++++++|||++......... .......++.+|+|+.++.++..+. .....+.+.++..
T Consensus 165 ~~~~~~~~~~gi~v~~v~pg~~~t~~~~~~~-----~~~~~~~~~~~d~a~~~~~~l~~~~~~~~~~~~~~~~~~ 234 (237)
T PRK07326 165 EAAMLDLRQYGIKVSTIMPGSVATHFNGHTP-----SEKDAWKIQPEDIAQLVLDLLKMPPRTLPSKIEVRPSRP 234 (237)
T ss_pred HHHHHHhcccCcEEEEEeeccccCccccccc-----chhhhccCCHHHHHHHHHHHHhCCccccccceEEecCCC
Confidence 2222224557999999999997544321110 0111235899999999999998776 3455666665443
|
|
| >PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.69 E-value=2.8e-15 Score=132.52 Aligned_cols=189 Identities=15% Similarity=0.155 Sum_probs=123.2
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhh----h---hcCCCcEEeecCCCCHHHHHHHhc-------C
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM----E---SFGTYVESMAGDASNKKFLKTALR-------G 162 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~----~---~~~~~v~~v~~D~~d~~~~~~~~~-------~ 162 (305)
.+++|+||||+|+||++++++|+++|++|+++.|+..... + ....++.++.+|+.|.+++.++++ +
T Consensus 4 ~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 83 (248)
T PRK05557 4 EGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEFGG 83 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 4589999999999999999999999999988888765311 1 123467889999999988877665 5
Q ss_pred ccEEEECCcch--------------------------Hh----hhhhhcCCCEEEEEcccccccCCCCcccccchHH--H
Q 021928 163 VRSIICPSEGF--------------------------IS----NAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA--R 210 (305)
Q Consensus 163 ~d~Vi~~~~g~--------------------------~~----~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~--~ 210 (305)
+|+|||+++.. +. +...+.+.++||++||.....+......|...+. .
T Consensus 84 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss~~~~~~~~~~~~y~~sk~a~~ 163 (248)
T PRK05557 84 VDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISSVVGLMGNPGQANYAASKAGVI 163 (248)
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcccccCcCCCCCchhHHHHHHHH
Confidence 79999884310 11 1223456678999999865544444444433221 1
Q ss_pred HHHHHHHHHHHhCCCCEEEEecCCcccCCCCC--cce--eeecCCCCCCccCHHHHHHHHHHHhhC--CCCCCcEEEEec
Q 021928 211 KLAEQDESMLMASGIPYTIIRTGVLQNTPGGK--QGF--QFEEGCAANGSLSKEDAAFICVEALES--IPQTGLIFEVVN 284 (305)
Q Consensus 211 ~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~--~~~--~~~~~~~~~~~Is~~DvA~~iv~~l~~--~~~~~~~~~v~~ 284 (305)
.+.+.....+...++.+++++||++....... ... ..........+++++|+|+++..++.. ....++.|++.+
T Consensus 164 ~~~~~~a~~~~~~~i~~~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~i~~ 243 (248)
T PRK05557 164 GFTKSLARELASRGITVNAVAPGFIETDMTDALPEDVKEAILAQIPLGRLGQPEEIASAVAFLASDEAAYITGQTLHVNG 243 (248)
T ss_pred HHHHHHHHHhhhhCeEEEEEecCccCCccccccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCcccCCccccEEEecC
Confidence 11222223344578999999999974332111 000 000111223467999999999998865 334678999986
Q ss_pred C
Q 021928 285 G 285 (305)
Q Consensus 285 g 285 (305)
|
T Consensus 244 ~ 244 (248)
T PRK05557 244 G 244 (248)
T ss_pred C
Confidence 5
|
|
| >PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=2.1e-15 Score=133.47 Aligned_cols=173 Identities=16% Similarity=0.165 Sum_probs=120.3
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh------hcCCCcEEeecCCCCHHHHHHHhc-------Ccc
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTALR-------GVR 164 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~------~~~~~v~~v~~D~~d~~~~~~~~~-------~~d 164 (305)
+++++||||+|+||++++++|+++|++|++++|++++..+ ..+.++.++.+|+++.+++.++++ ++|
T Consensus 7 ~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 86 (239)
T PRK07666 7 GKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGSID 86 (239)
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCCcc
Confidence 5899999999999999999999999999999998755322 123468889999999998887775 689
Q ss_pred EEEECCcch--------------------------Hhh----hhhhcCCCEEEEEcccccccCCCCcccccchHH--HHH
Q 021928 165 SIICPSEGF--------------------------ISN----AGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA--RKL 212 (305)
Q Consensus 165 ~Vi~~~~g~--------------------------~~~----~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~--~~~ 212 (305)
+|||+++.. +.. ...+.+.+++|++||...+.+......|...+. ..+
T Consensus 87 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~ 166 (239)
T PRK07666 87 ILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISSTAGQKGAAVTSAYSASKFGVLGL 166 (239)
T ss_pred EEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcchhhccCCCCCcchHHHHHHHHHH
Confidence 999883310 011 122356789999999877666555445544332 111
Q ss_pred HHHHHHHHHhCCCCEEEEecCCcccCCCCCcceeeecCCCCCCccCHHHHHHHHHHHhhCC
Q 021928 213 AEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESI 273 (305)
Q Consensus 213 ~~~aE~~l~~~gi~~tilRPg~l~~~~~~~~~~~~~~~~~~~~~Is~~DvA~~iv~~l~~~ 273 (305)
.+.....+...++++++++||.+.......... ........++++|+|+.++.++.++
T Consensus 167 ~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~---~~~~~~~~~~~~~~a~~~~~~l~~~ 224 (239)
T PRK07666 167 TESLMQEVRKHNIRVTALTPSTVATDMAVDLGL---TDGNPDKVMQPEDLAEFIVAQLKLN 224 (239)
T ss_pred HHHHHHHhhccCcEEEEEecCcccCcchhhccc---cccCCCCCCCHHHHHHHHHHHHhCC
Confidence 222223345679999999999976543321111 1112345789999999999999865
|
|
| >PRK06914 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.3e-15 Score=138.11 Aligned_cols=188 Identities=15% Similarity=0.177 Sum_probs=122.4
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh--------cCCCcEEeecCCCCHHHHHH------HhcCc
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES--------FGTYVESMAGDASNKKFLKT------ALRGV 163 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~--------~~~~v~~v~~D~~d~~~~~~------~~~~~ 163 (305)
+++++||||+|+||++++++|+++|++|++++|+++...+. ....++++.+|++|.+++.+ .+..+
T Consensus 3 ~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~i 82 (280)
T PRK06914 3 KKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHNFQLVLKEIGRI 82 (280)
T ss_pred CCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHHHHHHHHhcCCe
Confidence 47899999999999999999999999999999987653221 12368899999999887765 12356
Q ss_pred cEEEECCcc----h----------------------Hhh----hhhhcCCCEEEEEcccccccCCCCcccccchHHH--H
Q 021928 164 RSIICPSEG----F----------------------ISN----AGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--K 211 (305)
Q Consensus 164 d~Vi~~~~g----~----------------------~~~----~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~--~ 211 (305)
|+|||+++. . +.+ .+++.+.++||++||.....+..+...|...+.. .
T Consensus 83 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~~~~~ 162 (280)
T PRK06914 83 DLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKSGKIINISSISGRVGFPGLSPYVSSKYALEG 162 (280)
T ss_pred eEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECcccccCCCCCCchhHHhHHHHHH
Confidence 999988331 0 011 1345667899999998666555555555443221 1
Q ss_pred HHHHHHHHHHhCCCCEEEEecCCcccCCCC-Ccc---------eee--------e-cCCCCCCccCHHHHHHHHHHHhhC
Q 021928 212 LAEQDESMLMASGIPYTIIRTGVLQNTPGG-KQG---------FQF--------E-EGCAANGSLSKEDAAFICVEALES 272 (305)
Q Consensus 212 ~~~~aE~~l~~~gi~~tilRPg~l~~~~~~-~~~---------~~~--------~-~~~~~~~~Is~~DvA~~iv~~l~~ 272 (305)
+.+.....+...+++++++|||.+...... ... ..+ . .......+++++|+|++++.++++
T Consensus 163 ~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~ 242 (280)
T PRK06914 163 FSESLRLELKPFGIDVALIEPGSYNTNIWEVGKQLAENQSETTSPYKEYMKKIQKHINSGSDTFGNPIDVANLIVEIAES 242 (280)
T ss_pred HHHHHHHHhhhhCCEEEEEecCCcccchhhccccccccccccccchHHHHHHHHHHHhhhhhccCCHHHHHHHHHHHHcC
Confidence 111111223456999999999986433110 000 000 0 001123467999999999999987
Q ss_pred CCCCCcEEEEecCC
Q 021928 273 IPQTGLIFEVVNGE 286 (305)
Q Consensus 273 ~~~~~~~~~v~~g~ 286 (305)
+... ..|++.++.
T Consensus 243 ~~~~-~~~~~~~~~ 255 (280)
T PRK06914 243 KRPK-LRYPIGKGV 255 (280)
T ss_pred CCCC-cccccCCch
Confidence 7654 568887654
|
|
| >PRK08063 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.5e-15 Score=135.09 Aligned_cols=189 Identities=16% Similarity=0.159 Sum_probs=123.6
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEE-EEcCcchhhh------hcCCCcEEeecCCCCHHHHHHHhc-------Cc
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKA-LVKDKRNAME------SFGTYVESMAGDASNKKFLKTALR-------GV 163 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~-~~R~~~~~~~------~~~~~v~~v~~D~~d~~~~~~~~~-------~~ 163 (305)
+++++||||+|+||++++++|+++|++|++ ..|+.++..+ ..+.++.++.+|++|.+++.++++ .+
T Consensus 4 ~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 83 (250)
T PRK08063 4 GKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFGRL 83 (250)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 479999999999999999999999999876 4676654221 123468889999999988877765 47
Q ss_pred cEEEECCcch--------------------------H----hhhhhhcCCCEEEEEcccccccCCCCcccccchHH--HH
Q 021928 164 RSIICPSEGF--------------------------I----SNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA--RK 211 (305)
Q Consensus 164 d~Vi~~~~g~--------------------------~----~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~--~~ 211 (305)
|+|||+++.. + ....++.+.++||++||.....+......|...+. ..
T Consensus 84 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~sK~a~~~ 163 (250)
T PRK08063 84 DVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGSIRYLENYTTVGVSKAALEA 163 (250)
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhccCCCCccHHHHHHHHHHH
Confidence 9999984310 1 11123456679999999877655444444433222 11
Q ss_pred HHHHHHHHHHhCCCCEEEEecCCcccCCCC---Cc-cee--eecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEEEEe
Q 021928 212 LAEQDESMLMASGIPYTIIRTGVLQNTPGG---KQ-GFQ--FEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVV 283 (305)
Q Consensus 212 ~~~~aE~~l~~~gi~~tilRPg~l~~~~~~---~~-~~~--~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~v~ 283 (305)
+.+.....+...+++++.|+||.+...... .. ... ..........++++|+|++++.++.++. ..++.+++.
T Consensus 164 ~~~~~~~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~~~~~~g~~~~~~ 243 (250)
T PRK08063 164 LTRYLAVELAPKGIAVNAVSGGAVDTDALKHFPNREELLEDARAKTPAGRMVEPEDVANAVLFLCSPEADMIRGQTIIVD 243 (250)
T ss_pred HHHHHHHHHhHhCeEEEeEecCcccCchhhhccCchHHHHHHhcCCCCCCCcCHHHHHHHHHHHcCchhcCccCCEEEEC
Confidence 111112223457899999999996533211 00 000 0001112347899999999999997654 358888888
Q ss_pred cCC
Q 021928 284 NGE 286 (305)
Q Consensus 284 ~g~ 286 (305)
+|.
T Consensus 244 gg~ 246 (250)
T PRK08063 244 GGR 246 (250)
T ss_pred CCe
Confidence 764
|
|
| >PRK07904 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=2.3e-15 Score=135.12 Aligned_cols=172 Identities=16% Similarity=0.142 Sum_probs=118.3
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCC-CeEEEEEcCcch-hhh---hc----CCCcEEeecCCCCHHHHHHHhc-----
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRN-AME---SF----GTYVESMAGDASNKKFLKTALR----- 161 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~R~~~~-~~~---~~----~~~v~~v~~D~~d~~~~~~~~~----- 161 (305)
+..++|+||||+|+||++++++|+++| ++|++++|++++ ..+ .. ..+++++.+|+.|.+++.++++
T Consensus 6 ~~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~ 85 (253)
T PRK07904 6 GNPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFAG 85 (253)
T ss_pred CCCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHhc
Confidence 456899999999999999999999995 899999998765 221 11 2368899999999877654443
Q ss_pred -CccEEEECCcch------------------------------HhhhhhhcCCCEEEEEcccccccCCCCcccccchHHH
Q 021928 162 -GVRSIICPSEGF------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR 210 (305)
Q Consensus 162 -~~d~Vi~~~~g~------------------------------~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~ 210 (305)
++|.+|++++.. +...+++.+..+||++||.....+......|..+++.
T Consensus 86 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~~~~iv~isS~~g~~~~~~~~~Y~~sKaa 165 (253)
T PRK07904 86 GDVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQGFGQIIAMSSVAGERVRRSNFVYGSTKAG 165 (253)
T ss_pred CCCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcCCceEEEEechhhcCCCCCCcchHHHHHH
Confidence 689988762210 1223445667899999998765544444445443321
Q ss_pred --HHHHHHHHHHHhCCCCEEEEecCCcccCCCCCcceeeecCCCCCCccCHHHHHHHHHHHhhCCC
Q 021928 211 --KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIP 274 (305)
Q Consensus 211 --~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~~~~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~ 274 (305)
.+.+.....++..++++++++||++.+...... ......++++|+|+.++.++.++.
T Consensus 166 ~~~~~~~l~~el~~~~i~v~~v~Pg~v~t~~~~~~-------~~~~~~~~~~~~A~~i~~~~~~~~ 224 (253)
T PRK07904 166 LDGFYLGLGEALREYGVRVLVVRPGQVRTRMSAHA-------KEAPLTVDKEDVAKLAVTAVAKGK 224 (253)
T ss_pred HHHHHHHHHHHHhhcCCEEEEEeeCceecchhccC-------CCCCCCCCHHHHHHHHHHHHHcCC
Confidence 122334455677899999999999765322111 011245899999999999998653
|
|
| >PRK07775 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.7e-15 Score=137.36 Aligned_cols=187 Identities=13% Similarity=0.094 Sum_probs=120.9
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh------cCCCcEEeecCCCCHHHHHHHhc-------Cc
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GV 163 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~~~v~~v~~D~~d~~~~~~~~~-------~~ 163 (305)
.+++++||||+|+||++++++|+++|++|++++|+.+...+. .+.++.++.+|++|.+++.++++ ++
T Consensus 9 ~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 88 (274)
T PRK07775 9 DRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALGEI 88 (274)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence 358999999999999999999999999999999986543221 12457888999999998877665 57
Q ss_pred cEEEECCcch--------------------------Hhhh----hhhcCCCEEEEEcccccccCCCCcccccchHHH--H
Q 021928 164 RSIICPSEGF--------------------------ISNA----GSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--K 211 (305)
Q Consensus 164 d~Vi~~~~g~--------------------------~~~~----a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~--~ 211 (305)
|++||+++.. +... ..+.+..+||++||...+.+......|...+.. .
T Consensus 89 d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~ 168 (274)
T PRK07775 89 EVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRRGDLIFVGSDVALRQRPHMGAYGAAKAGLEA 168 (274)
T ss_pred CEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECChHhcCCCCCcchHHHHHHHHHH
Confidence 9999884310 1111 123456689999998877655444445433221 1
Q ss_pred HHHHHHHHHHhCCCCEEEEecCCcccCCCCC--cc-e-e-e-----ecCCCCCCccCHHHHHHHHHHHhhCCCCCCcEEE
Q 021928 212 LAEQDESMLMASGIPYTIIRTGVLQNTPGGK--QG-F-Q-F-----EEGCAANGSLSKEDAAFICVEALESIPQTGLIFE 281 (305)
Q Consensus 212 ~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~--~~-~-~-~-----~~~~~~~~~Is~~DvA~~iv~~l~~~~~~~~~~~ 281 (305)
+.+.....+...+++++++|||.+....... .. . . . ........+++++|+|++++.++.++. .+.+|+
T Consensus 169 l~~~~~~~~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~~~~~~~~~-~~~~~~ 247 (274)
T PRK07775 169 MVTNLQMELEGTGVRASIVHPGPTLTGMGWSLPAEVIGPMLEDWAKWGQARHDYFLRASDLARAITFVAETPR-GAHVVN 247 (274)
T ss_pred HHHHHHHHhcccCeEEEEEeCCcccCcccccCChhhhhHHHHHHHHhcccccccccCHHHHHHHHHHHhcCCC-CCCeeE
Confidence 1111111123358999999999864332110 00 0 0 0 011123458999999999999998654 345677
Q ss_pred Eec
Q 021928 282 VVN 284 (305)
Q Consensus 282 v~~ 284 (305)
+.=
T Consensus 248 ~~~ 250 (274)
T PRK07775 248 MEV 250 (274)
T ss_pred Eee
Confidence 663
|
|
| >PRK07523 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.5e-15 Score=135.79 Aligned_cols=191 Identities=15% Similarity=0.172 Sum_probs=126.7
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh---c---CCCcEEeecCCCCHHHHHHHhc-------C
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---F---GTYVESMAGDASNKKFLKTALR-------G 162 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~---~~~v~~v~~D~~d~~~~~~~~~-------~ 162 (305)
..+++||||||+|+||++++++|+++|++|+++.|++++..+. + +.++.++.+|++|.+++.++++ .
T Consensus 8 ~~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 87 (255)
T PRK07523 8 LTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEIGP 87 (255)
T ss_pred CCCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhcCC
Confidence 3468999999999999999999999999999999987653221 1 2357889999999988887775 4
Q ss_pred ccEEEECCcch--------------------------Hhhh----hhhcCCCEEEEEcccccccCCCCcccccchHHH--
Q 021928 163 VRSIICPSEGF--------------------------ISNA----GSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR-- 210 (305)
Q Consensus 163 ~d~Vi~~~~g~--------------------------~~~~----a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~-- 210 (305)
+|+|||+++.. +..+ ..+.+.++||++||.....+......|...+..
T Consensus 88 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~~sK~a~~ 167 (255)
T PRK07523 88 IDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASVQSALARPGIAPYTATKGAVG 167 (255)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccchhccCCCCCccHHHHHHHHH
Confidence 69999884310 1111 223467899999998766555444445443221
Q ss_pred HHHHHHHHHHHhCCCCEEEEecCCcccCCCC----Ccce--eeecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEEEE
Q 021928 211 KLAEQDESMLMASGIPYTIIRTGVLQNTPGG----KQGF--QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEV 282 (305)
Q Consensus 211 ~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~----~~~~--~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~v 282 (305)
.+.+.....+...+++++.++||.+...... .... .+........+..++|+|.+++.++.+.. ..++.+++
T Consensus 168 ~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~i~~ 247 (255)
T PRK07523 168 NLTKGMATDWAKHGLQCNAIAPGYFDTPLNAALVADPEFSAWLEKRTPAGRWGKVEELVGACVFLASDASSFVNGHVLYV 247 (255)
T ss_pred HHHHHHHHHhhHhCeEEEEEEECcccCchhhhhccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCccCcEEEE
Confidence 1112222234467899999999996543211 0000 01111122446779999999999997543 35789988
Q ss_pred ecCC
Q 021928 283 VNGE 286 (305)
Q Consensus 283 ~~g~ 286 (305)
.+|.
T Consensus 248 ~gg~ 251 (255)
T PRK07523 248 DGGI 251 (255)
T ss_pred CCCe
Confidence 8764
|
|
| >PRK05876 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=3.6e-15 Score=135.49 Aligned_cols=199 Identities=17% Similarity=0.156 Sum_probs=129.3
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh------cCCCcEEeecCCCCHHHHHHHhc-------Cc
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GV 163 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~~~v~~v~~D~~d~~~~~~~~~-------~~ 163 (305)
.+++++||||+|+||++++++|+++|++|+++.|+++...+. .+.++.++.+|++|.+++.++++ .+
T Consensus 5 ~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 84 (275)
T PRK05876 5 PGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLGHV 84 (275)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence 458999999999999999999999999999999987553321 12357889999999988877665 46
Q ss_pred cEEEECCc----ch----------------------Hhhh----hhhcC-CCEEEEEcccccccCCCCcccccchHHH--
Q 021928 164 RSIICPSE----GF----------------------ISNA----GSLKG-VQHVILLSQLSVYRGSGGIQALMKGNAR-- 210 (305)
Q Consensus 164 d~Vi~~~~----g~----------------------~~~~----a~~~g-v~~~V~iSS~~~~~~~~~~~~~~~~~~~-- 210 (305)
|++||+++ +. +..+ ..+.+ ..+||++||..++.+..+...|..++..
T Consensus 85 d~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~ 164 (275)
T PRK05876 85 DVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLVPNAGLGAYGVAKYGVV 164 (275)
T ss_pred CEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhccCCCCCchHHHHHHHHH
Confidence 99998743 10 1111 12233 4689999999887666555555543321
Q ss_pred HHHHHHHHHHHhCCCCEEEEecCCcccCCCCCc----ce---------eeecCCCCCCccCHHHHHHHHHHHhhCCCCCC
Q 021928 211 KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQ----GF---------QFEEGCAANGSLSKEDAAFICVEALESIPQTG 277 (305)
Q Consensus 211 ~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~~----~~---------~~~~~~~~~~~Is~~DvA~~iv~~l~~~~~~~ 277 (305)
.+.+.....+...++.+++++||.+........ .. ..+........++++|+|+.++.++.+.
T Consensus 165 ~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~ai~~~---- 240 (275)
T PRK05876 165 GLAETLAREVTADGIGVSVLCPMVVETNLVANSERIRGAACAQSSTTGSPGPLPLQDDNLGVDDIAQLTADAILAN---- 240 (275)
T ss_pred HHHHHHHHHhhhcCcEEEEEEeCccccccccchhhhcCccccccccccccccccccccCCCHHHHHHHHHHHHHcC----
Confidence 112222223445799999999998654321110 00 0011112235789999999999999754
Q ss_pred cEEEEecCCcCHHHHHHHHHHhh
Q 021928 278 LIFEVVNGEEKVSDWKKCFSRLM 300 (305)
Q Consensus 278 ~~~~v~~g~~s~~d~~~~~~~l~ 300 (305)
+.+.+. ++.....+.+.+..+.
T Consensus 241 ~~~~~~-~~~~~~~~~~~~~~~~ 262 (275)
T PRK05876 241 RLYVLP-HAASRASIRRRFERID 262 (275)
T ss_pred CeEEec-ChhhHHHHHHHHHHHH
Confidence 344444 4444556666665554
|
|
| >COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.9e-15 Score=132.08 Aligned_cols=180 Identities=16% Similarity=0.149 Sum_probs=127.0
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh---cC-CCcEEeecCCCCHHHHHHHh-------cCccEE
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FG-TYVESMAGDASNKKFLKTAL-------RGVRSI 166 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~~-~~v~~v~~D~~d~~~~~~~~-------~~~d~V 166 (305)
.|.++|||||++||.++++.|+++|++|++..|+.++++++ ++ ..+.++..|++|.+++++++ ..+|++
T Consensus 6 ~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g~iDiL 85 (246)
T COG4221 6 GKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGAGAALALALDVTDRAAVEAAIEALPEEFGRIDIL 85 (246)
T ss_pred CcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHHhhCcccEE
Confidence 48999999999999999999999999999999999875543 33 35889999999998865554 357999
Q ss_pred EECCc----ch--------------------------HhhhhhhcCCCEEEEEcccccccCCCCcccccchHH--HHHHH
Q 021928 167 ICPSE----GF--------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA--RKLAE 214 (305)
Q Consensus 167 i~~~~----g~--------------------------~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~--~~~~~ 214 (305)
|+++| +. +...+.+.+-.+||.+||.++..+.++...|...++ +.+.+
T Consensus 86 vNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiAG~~~y~~~~vY~ATK~aV~~fs~ 165 (246)
T COG4221 86 VNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIAGRYPYPGGAVYGATKAAVRAFSL 165 (246)
T ss_pred EecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEeccccccccCCCCccchhhHHHHHHHHH
Confidence 98744 11 111233445559999999988776666666665442 22334
Q ss_pred HHHHHHHhCCCCEEEEecCCcccC-CC----CCcceeeecCCCCCCccCHHHHHHHHHHHhhCCCCCC
Q 021928 215 QDESMLMASGIPYTIIRTGVLQNT-PG----GKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTG 277 (305)
Q Consensus 215 ~aE~~l~~~gi~~tilRPg~l~~~-~~----~~~~~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~~~~ 277 (305)
...+.+...++++|.|.||..... .. .+.......--.....+..+|+|+++.++++.|.+.+
T Consensus 166 ~LR~e~~g~~IRVt~I~PG~v~~~~~s~v~~~g~~~~~~~~y~~~~~l~p~dIA~~V~~~~~~P~~vn 233 (246)
T COG4221 166 GLRQELAGTGIRVTVISPGLVETTEFSTVRFEGDDERADKVYKGGTALTPEDIAEAVLFAATQPQHVN 233 (246)
T ss_pred HHHHHhcCCCeeEEEecCceecceecccccCCchhhhHHHHhccCCCCCHHHHHHHHHHHHhCCCccc
Confidence 444455568999999999997432 21 1111111000123467899999999999999998643
|
|
| >PRK06179 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.8e-15 Score=136.41 Aligned_cols=182 Identities=13% Similarity=0.095 Sum_probs=122.2
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcC-------ccEEEECC
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRG-------VRSIICPS 170 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~-------~d~Vi~~~ 170 (305)
+++|+||||+|+||++++++|+++|++|++++|++++... ..+++++.+|++|.+++.++++. +|+||+++
T Consensus 4 ~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~--~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d~li~~a 81 (270)
T PRK06179 4 SKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAP--IPGVELLELDVTDDASVQAAVDEVIARAGRIDVLVNNA 81 (270)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc--cCCCeeEEeecCCHHHHHHHHHHHHHhCCCCCEEEECC
Confidence 4789999999999999999999999999999998765432 23588999999999998887764 69999884
Q ss_pred cch------------------------------HhhhhhhcCCCEEEEEcccccccCCCCcccccchHH--HHHHHHHHH
Q 021928 171 EGF------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA--RKLAEQDES 218 (305)
Q Consensus 171 ~g~------------------------------~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~--~~~~~~aE~ 218 (305)
+.. +...+++.+.++||++||...+.+.+....|...+. ..+.+....
T Consensus 82 g~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~ 161 (270)
T PRK06179 82 GVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQGSGRIINISSVLGFLPAPYMALYAASKHAVEGYSESLDH 161 (270)
T ss_pred CCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEECCccccCCCCCccHHHHHHHHHHHHHHHHHH
Confidence 310 111245577899999999877665544444544322 112222333
Q ss_pred HHHhCCCCEEEEecCCcccCCCCC-----ccee-ee---------cCCCCCCccCHHHHHHHHHHHhhCCCCCCcEEEE
Q 021928 219 MLMASGIPYTIIRTGVLQNTPGGK-----QGFQ-FE---------EGCAANGSLSKEDAAFICVEALESIPQTGLIFEV 282 (305)
Q Consensus 219 ~l~~~gi~~tilRPg~l~~~~~~~-----~~~~-~~---------~~~~~~~~Is~~DvA~~iv~~l~~~~~~~~~~~v 282 (305)
.+.+.++++++++||++....... .... +. .........+.+|+|+.++.++..+.. ...|..
T Consensus 162 el~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~~~~~~~~-~~~~~~ 239 (270)
T PRK06179 162 EVRQFGIRVSLVEPAYTKTNFDANAPEPDSPLAEYDRERAVVSKAVAKAVKKADAPEVVADTVVKAALGPWP-KMRYTA 239 (270)
T ss_pred HHhhhCcEEEEEeCCCcccccccccCCCCCcchhhHHHHHHHHHHHHhccccCCCHHHHHHHHHHHHcCCCC-CeeEec
Confidence 455689999999999965432110 0000 00 001112346789999999999976542 334433
|
|
| >KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.68 E-value=2.5e-15 Score=135.70 Aligned_cols=204 Identities=17% Similarity=0.187 Sum_probs=143.5
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcch-------hhhhcC--CCcEEeecCCCCHHHHHHHhcC--ccEE
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-------AMESFG--TYVESMAGDASNKKFLKTALRG--VRSI 166 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~-------~~~~~~--~~v~~v~~D~~d~~~~~~~~~~--~d~V 166 (305)
.++||||||+|+||+|.+.+|+++||.|++++.-... ..+..+ ..+.++.+|+.|.+.+++.|+. .|.|
T Consensus 2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~~fd~V 81 (343)
T KOG1371|consen 2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEVKFDAV 81 (343)
T ss_pred CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhcCCceE
Confidence 4899999999999999999999999999998642221 222333 6799999999999999999985 5999
Q ss_pred EECCc----c------------------hHhhhhhhcCCCEEEEEcccccccCCCCc---------ccccchHHHHHHHH
Q 021928 167 ICPSE----G------------------FISNAGSLKGVQHVILLSQLSVYRGSGGI---------QALMKGNARKLAEQ 215 (305)
Q Consensus 167 i~~~~----g------------------~~~~~a~~~gv~~~V~iSS~~~~~~~~~~---------~~~~~~~~~~~~~~ 215 (305)
+|.++ + .+.+.+++.+++++|+.||+.+|..+..+ +++.++.. .+..
T Consensus 82 ~Hfa~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~~~~~~V~sssatvYG~p~~ip~te~~~t~~p~~pyg~--tK~~ 159 (343)
T KOG1371|consen 82 MHFAALAAVGESMENPLSYYHNNIAGTLNLLEVMKAHNVKALVFSSSATVYGLPTKVPITEEDPTDQPTNPYGK--TKKA 159 (343)
T ss_pred EeehhhhccchhhhCchhheehhhhhHHHHHHHHHHcCCceEEEecceeeecCcceeeccCcCCCCCCCCcchh--hhHH
Confidence 98632 1 15667888899999999999999742211 23333322 2334
Q ss_pred HHHHHH----hCCCCEEEEec--------CC-cccCCC-----------------------CCcceeeecCCCCCCccCH
Q 021928 216 DESMLM----ASGIPYTIIRT--------GV-LQNTPG-----------------------GKQGFQFEEGCAANGSLSK 259 (305)
Q Consensus 216 aE~~l~----~~gi~~tilRP--------g~-l~~~~~-----------------------~~~~~~~~~~~~~~~~Is~ 259 (305)
.|+.+. ..++..+.||- .. +.+.+. .++.+....++...+.|++
T Consensus 160 iE~i~~d~~~~~~~~~~~LRyfn~~ga~p~Gr~ge~p~~~~nnl~p~v~~vaigr~~~l~v~g~d~~t~dgt~vrdyi~v 239 (343)
T KOG1371|consen 160 IEEIIHDYNKAYGWKVTGLRYFNVIGAHPSGRIGEAPLGIPNNLLPYVFQVAIGRRPNLQVVGRDYTTIDGTIVRDYIHV 239 (343)
T ss_pred HHHHHHhhhccccceEEEEEeccccCccccCccCCCCccCcccccccccchhhcccccceeecCcccccCCCeeecceee
Confidence 555554 35677888882 11 111110 0111111234556788999
Q ss_pred HHHHHHHHHHhhCCCC--CCcEEEEecCC-cCHHHHHHHHHHhhhhc
Q 021928 260 EDAAFICVEALESIPQ--TGLIFEVVNGE-EKVSDWKKCFSRLMEKT 303 (305)
Q Consensus 260 ~DvA~~iv~~l~~~~~--~~~~~~v~~g~-~s~~d~~~~~~~l~~~~ 303 (305)
-|.|+..+.+++.... .-.+||+.++. .++.++++.+++.++.-
T Consensus 240 ~Dla~~h~~al~k~~~~~~~~i~Nlgtg~g~~V~~lv~a~~k~~g~~ 286 (343)
T KOG1371|consen 240 LDLADGHVAALGKLRGAAEFGVYNLGTGKGSSVLELVTAFEKALGVK 286 (343)
T ss_pred EehHHHHHHHhhccccchheeeEeecCCCCccHHHHHHHHHHHhcCC
Confidence 9999999999987653 34599999876 47899999999988764
|
|
| >PRK07074 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=2.7e-15 Score=134.21 Aligned_cols=200 Identities=16% Similarity=0.116 Sum_probs=131.7
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh----cCCCcEEeecCCCCHHHHHHHhc-------CccEE
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES----FGTYVESMAGDASNKKFLKTALR-------GVRSI 166 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~----~~~~v~~v~~D~~d~~~~~~~~~-------~~d~V 166 (305)
+++++||||+|+||++++++|+++|++|++++|++++.... ...+++++.+|+.|.+++.++++ ++|+|
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~v 81 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGDARFVPVACDLTDAASLAAALANAAAERGPVDVL 81 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 47899999999999999999999999999999987654322 12358899999999998877775 47999
Q ss_pred EECCcc----h--------------------------HhhhhhhcCCCEEEEEcccccccCCCCcccccchHH--HHHHH
Q 021928 167 ICPSEG----F--------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA--RKLAE 214 (305)
Q Consensus 167 i~~~~g----~--------------------------~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~--~~~~~ 214 (305)
||+++. . ....+.+.+.++||++||....... +...|..+++ ..+.+
T Consensus 82 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~-~~~~y~~sK~a~~~~~~ 160 (257)
T PRK07074 82 VANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIGSVNGMAAL-GHPAYSAAKAGLIHYTK 160 (257)
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhcCCC-CCcccHHHHHHHHHHHH
Confidence 988431 0 0111234566789999997554322 2223333221 11111
Q ss_pred HHHHHHHhCCCCEEEEecCCcccCCCCC----cceeee---cCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEEEEecC
Q 021928 215 QDESMLMASGIPYTIIRTGVLQNTPGGK----QGFQFE---EGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVNG 285 (305)
Q Consensus 215 ~aE~~l~~~gi~~tilRPg~l~~~~~~~----~~~~~~---~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~v~~g 285 (305)
.....+...+++++.++||++....... ...... .......+++++|+|++++.++.+.. ..++.+++.+|
T Consensus 161 ~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~~g 240 (257)
T PRK07074 161 LLAVEYGRFGIRANAVAPGTVKTQAWEARVAANPQVFEELKKWYPLQDFATPDDVANAVLFLASPAARAITGVCLPVDGG 240 (257)
T ss_pred HHHHHHhHhCeEEEEEEeCcCCcchhhcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCchhcCcCCcEEEeCCC
Confidence 1112233468999999999864332111 000000 11233568999999999999996532 35788889887
Q ss_pred Cc-CHHHHHHHHHH
Q 021928 286 EE-KVSDWKKCFSR 298 (305)
Q Consensus 286 ~~-s~~d~~~~~~~ 298 (305)
.. ...|+.+.+.+
T Consensus 241 ~~~~~~~~~~~~~~ 254 (257)
T PRK07074 241 LTAGNREMARTLTL 254 (257)
T ss_pred cCcCChhhhhhhcc
Confidence 75 47888877654
|
|
| >PRK08219 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=2.2e-15 Score=131.91 Aligned_cols=184 Identities=15% Similarity=0.083 Sum_probs=120.4
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhc--CCCcEEeecCCCCHHHHHHHhc---CccEEEECCcc
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF--GTYVESMAGDASNKKFLKTALR---GVRSIICPSEG 172 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~--~~~v~~v~~D~~d~~~~~~~~~---~~d~Vi~~~~g 172 (305)
+|+++||||+|+||++++++|+++ ++|++++|++++..+.. ...++++.+|+.|.+++.++++ ++|.|||+++.
T Consensus 3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag~ 81 (227)
T PRK08219 3 RPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAELPGATPFPVDLTDPEAIAAAVEQLGRLDVLVHNAGV 81 (227)
T ss_pred CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHhccceEEecCCCCHHHHHHHHHhcCCCCEEEECCCc
Confidence 579999999999999999999999 99999999876633221 1358899999999999998887 58999998321
Q ss_pred h------------------------------HhhhhhhcCCCEEEEEcccccccCCCCcccccchHHHHHHHHHHHHHH-
Q 021928 173 F------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLM- 221 (305)
Q Consensus 173 ~------------------------------~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~~~~~~aE~~l~- 221 (305)
. +.+.++ ...+++|++||..++.+..+...|...+. ..+...+.++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~~~~v~~ss~~~~~~~~~~~~y~~~K~--a~~~~~~~~~~ 158 (227)
T PRK08219 82 ADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALR-AAHGHVVFINSGAGLRANPGWGSYAASKF--ALRALADALRE 158 (227)
T ss_pred CCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHH-hCCCeEEEEcchHhcCcCCCCchHHHHHH--HHHHHHHHHHH
Confidence 0 001112 23568999999887765554444543221 1111111121
Q ss_pred -hCC-CCEEEEecCCcccCCCCCcceeeecCCCCCCccCHHHHHHHHHHHhhCCCCCCcEEEEecCC
Q 021928 222 -ASG-IPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVVNGE 286 (305)
Q Consensus 222 -~~g-i~~tilRPg~l~~~~~~~~~~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~~~~~~~~v~~g~ 286 (305)
..+ ++++.++||.+....................+++++|+|++++.+++++. .+.++++.-.+
T Consensus 159 ~~~~~i~~~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~l~~~~-~~~~~~~~~~~ 224 (227)
T PRK08219 159 EEPGNVRVTSVHPGRTDTDMQRGLVAQEGGEYDPERYLRPETVAKAVRFAVDAPP-DAHITEVVVRP 224 (227)
T ss_pred HhcCCceEEEEecCCccchHhhhhhhhhccccCCCCCCCHHHHHHHHHHHHcCCC-CCccceEEEec
Confidence 134 99999999985433211100000011123457999999999999997654 45677776443
|
|
| >PRK05993 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.3e-15 Score=138.38 Aligned_cols=178 Identities=15% Similarity=0.139 Sum_probs=120.4
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhc--------CccEEEE
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--------GVRSIIC 168 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~--------~~d~Vi~ 168 (305)
++++|+||||+|+||++++++|+++|++|++++|++++..+....+++++.+|++|.+++.++++ .+|++|+
T Consensus 3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id~li~ 82 (277)
T PRK05993 3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALEAEGLEAFQLDYAEPESIAALVAQVLELSGGRLDALFN 82 (277)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCceEEEccCCCHHHHHHHHHHHHHHcCCCccEEEE
Confidence 35799999999999999999999999999999999876554444468899999999888776654 4699998
Q ss_pred CCc----ch--------------------------HhhhhhhcCCCEEEEEcccccccCCCCcccccchHH--HHHHHHH
Q 021928 169 PSE----GF--------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA--RKLAEQD 216 (305)
Q Consensus 169 ~~~----g~--------------------------~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~--~~~~~~a 216 (305)
+++ +. +.+.+++.+.++||++||..++.+......|..++. ..+.+..
T Consensus 83 ~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~l 162 (277)
T PRK05993 83 NGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQGQGRIVQCSSILGLVPMKYRGAYNASKFAIEGLSLTL 162 (277)
T ss_pred CCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcCCCEEEEECChhhcCCCCccchHHHHHHHHHHHHHHH
Confidence 732 00 122345567789999999877765555555544332 1112222
Q ss_pred HHHHHhCCCCEEEEecCCcccCCCCC------ccee---------e-------ec-CCCCCCccCHHHHHHHHHHHhhCC
Q 021928 217 ESMLMASGIPYTIIRTGVLQNTPGGK------QGFQ---------F-------EE-GCAANGSLSKEDAAFICVEALESI 273 (305)
Q Consensus 217 E~~l~~~gi~~tilRPg~l~~~~~~~------~~~~---------~-------~~-~~~~~~~Is~~DvA~~iv~~l~~~ 273 (305)
...+...++.+++|+||.+....... +... + .. .......++++++|+.+++++..+
T Consensus 163 ~~el~~~gi~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~i~~a~~~~ 242 (277)
T PRK05993 163 RMELQGSGIHVSLIEPGPIETRFRANALAAFKRWIDIENSVHRAAYQQQMARLEGGGSKSRFKLGPEAVYAVLLHALTAP 242 (277)
T ss_pred HHHhhhhCCEEEEEecCCccCchhhHHHHHHhhhhccccchhHHHHHHHHHHHHhhhhccccCCCHHHHHHHHHHHHcCC
Confidence 23355689999999999865332110 0000 0 00 001112478999999999999865
Q ss_pred C
Q 021928 274 P 274 (305)
Q Consensus 274 ~ 274 (305)
.
T Consensus 243 ~ 243 (277)
T PRK05993 243 R 243 (277)
T ss_pred C
Confidence 4
|
|
| >PRK12829 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.6e-15 Score=135.94 Aligned_cols=192 Identities=17% Similarity=0.144 Sum_probs=122.8
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh---cC-CCcEEeecCCCCHHHHHHHhc-------Ccc
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FG-TYVESMAGDASNKKFLKTALR-------GVR 164 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~~-~~v~~v~~D~~d~~~~~~~~~-------~~d 164 (305)
.+.+++|||||+|+||++++++|+++|++|+++.|+++...+. .+ .++.++.+|+.|.+++.++++ ++|
T Consensus 9 ~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 88 (264)
T PRK12829 9 LDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERVFDTAVERFGGLD 88 (264)
T ss_pred cCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence 3568999999999999999999999999999999987553321 11 146889999999988877664 689
Q ss_pred EEEECCcch---------------------------Hhh----hhhhcCC-CEEEEEcccccccCCCCcccccchHH--H
Q 021928 165 SIICPSEGF---------------------------ISN----AGSLKGV-QHVILLSQLSVYRGSGGIQALMKGNA--R 210 (305)
Q Consensus 165 ~Vi~~~~g~---------------------------~~~----~a~~~gv-~~~V~iSS~~~~~~~~~~~~~~~~~~--~ 210 (305)
+|||+++.. +.+ ..+..+. ++||++||.....+.+....|...+. .
T Consensus 89 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~~~~~~~~~~~y~~~K~a~~ 168 (264)
T PRK12829 89 VLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAGRLGYPGRTPYAASKWAVV 168 (264)
T ss_pred EEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEecccccccCCCCCchhHHHHHHHH
Confidence 999883311 111 1233444 67888888765544333334433222 1
Q ss_pred HHHHHHHHHHHhCCCCEEEEecCCcccCCCC----------Cccee-----eecCCCCCCccCHHHHHHHHHHHhhCC--
Q 021928 211 KLAEQDESMLMASGIPYTIIRTGVLQNTPGG----------KQGFQ-----FEEGCAANGSLSKEDAAFICVEALESI-- 273 (305)
Q Consensus 211 ~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~----------~~~~~-----~~~~~~~~~~Is~~DvA~~iv~~l~~~-- 273 (305)
.+.+.....+...+++++++|||++...... ..... .........+++++|+|+++..++...
T Consensus 169 ~~~~~l~~~~~~~~i~~~~l~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~ 248 (264)
T PRK12829 169 GLVKSLAIELGPLGIRVNAILPGIVRGPRMRRVIEARAQQLGIGLDEMEQEYLEKISLGRMVEPEDIAATALFLASPAAR 248 (264)
T ss_pred HHHHHHHHHHhhcCeEEEEEecCCcCChHHHHHhhhhhhccCCChhHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCcccc
Confidence 1111112223446899999999996432110 00000 000112235799999999999988642
Q ss_pred CCCCcEEEEecCCc
Q 021928 274 PQTGLIFEVVNGEE 287 (305)
Q Consensus 274 ~~~~~~~~v~~g~~ 287 (305)
...++.|++.+|..
T Consensus 249 ~~~g~~~~i~~g~~ 262 (264)
T PRK12829 249 YITGQAISVDGNVE 262 (264)
T ss_pred CccCcEEEeCCCcc
Confidence 34678999998753
|
|
| >PRK07806 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=3.6e-15 Score=132.62 Aligned_cols=189 Identities=14% Similarity=0.135 Sum_probs=121.7
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh-------hcCCCcEEeecCCCCHHHHHHHhc-------C
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME-------SFGTYVESMAGDASNKKFLKTALR-------G 162 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~-------~~~~~v~~v~~D~~d~~~~~~~~~-------~ 162 (305)
++++++||||+|+||++++++|+++|++|++++|+.....+ ..+.++.++.+|++|.+++.++++ +
T Consensus 5 ~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 84 (248)
T PRK07806 5 PGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEFGG 84 (248)
T ss_pred CCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence 35899999999999999999999999999999997543111 123457889999999988877665 5
Q ss_pred ccEEEECCcch--------------------Hhhhhhhc--CCCEEEEEccccccc-CC-CCcccccchHHHHHHHHHHH
Q 021928 163 VRSIICPSEGF--------------------ISNAGSLK--GVQHVILLSQLSVYR-GS-GGIQALMKGNARKLAEQDES 218 (305)
Q Consensus 163 ~d~Vi~~~~g~--------------------~~~~a~~~--gv~~~V~iSS~~~~~-~~-~~~~~~~~~~~~~~~~~aE~ 218 (305)
+|+||++++.. +.+.+... ...+||++||..+.. +. .....+..|.. .|...|.
T Consensus 85 ~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~~~~Y~~--sK~a~e~ 162 (248)
T PRK07806 85 LDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSHQAHFIPTVKTMPEYEPVAR--SKRAGED 162 (248)
T ss_pred CcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCchhhcCccccCCccccHHHH--HHHHHHH
Confidence 79999874310 22223221 235899999865431 11 11111222222 2323344
Q ss_pred HHH-------hCCCCEEEEecCCcccCCCC------CcceeeecCCCCCCccCHHHHHHHHHHHhhCCCCCCcEEEEecC
Q 021928 219 MLM-------ASGIPYTIIRTGVLQNTPGG------KQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVVNG 285 (305)
Q Consensus 219 ~l~-------~~gi~~tilRPg~l~~~~~~------~~~~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~~~~~~~~v~~g 285 (305)
+++ ..++++++++||.+...... ..............+++++|+|++++.+++.+...+++|++.++
T Consensus 163 ~~~~l~~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~g~~~~i~~~ 242 (248)
T PRK07806 163 ALRALRPELAEKGIGFVVVSGDMIEGTVTATLLNRLNPGAIEARREAAGKLYTVSEFAAEVARAVTAPVPSGHIEYVGGA 242 (248)
T ss_pred HHHHHHHHhhccCeEEEEeCCccccCchhhhhhccCCHHHHHHHHhhhcccCCHHHHHHHHHHHhhccccCccEEEecCc
Confidence 332 36899999999875432110 00000000011236789999999999999977678999999988
Q ss_pred Cc
Q 021928 286 EE 287 (305)
Q Consensus 286 ~~ 287 (305)
+.
T Consensus 243 ~~ 244 (248)
T PRK07806 243 DY 244 (248)
T ss_pred cc
Confidence 64
|
|
| >PRK12939 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=6.1e-15 Score=130.91 Aligned_cols=190 Identities=16% Similarity=0.135 Sum_probs=126.5
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh------cCCCcEEeecCCCCHHHHHHHh-------cCc
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTAL-------RGV 163 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~~~v~~v~~D~~d~~~~~~~~-------~~~ 163 (305)
.+++++||||+|+||++++++|+++|++|+++.|++++..+. ...++.++.+|++|.+++.+++ .++
T Consensus 6 ~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 85 (250)
T PRK12939 6 AGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAALGGL 85 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 358999999999999999999999999999999987653221 1246889999999998887766 368
Q ss_pred cEEEECCcch--------------------------Hhhh----hhhcCCCEEEEEcccccccCCCCcccccchHH--HH
Q 021928 164 RSIICPSEGF--------------------------ISNA----GSLKGVQHVILLSQLSVYRGSGGIQALMKGNA--RK 211 (305)
Q Consensus 164 d~Vi~~~~g~--------------------------~~~~----a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~--~~ 211 (305)
|+|||+++.. +.++ ..+.+..+||++||...+.+......|...+. ..
T Consensus 86 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~~~~~ 165 (250)
T PRK12939 86 DGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTALWGAPKLGAYVASKGAVIG 165 (250)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECchhhccCCCCcchHHHHHHHHHH
Confidence 9999884310 1111 22334569999999877655444444433222 11
Q ss_pred HHHHHHHHHHhCCCCEEEEecCCcccCCCC-Ccc----eeeecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEEEEec
Q 021928 212 LAEQDESMLMASGIPYTIIRTGVLQNTPGG-KQG----FQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVN 284 (305)
Q Consensus 212 ~~~~aE~~l~~~gi~~tilRPg~l~~~~~~-~~~----~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~v~~ 284 (305)
+.+.....+...++.++.++||.+...... ... ..+........+++++|+|++++.++..+. ..|+.+.+.+
T Consensus 166 ~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~i~~~g 245 (250)
T PRK12939 166 MTRSLARELGGRGITVNAIAPGLTATEATAYVPADERHAYYLKGRALERLQVPDDVAGAVLFLLSDAARFVTGQLLPVNG 245 (250)
T ss_pred HHHHHHHHHhhhCEEEEEEEECCCCCccccccCChHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCccccCccCcEEEECC
Confidence 112222233457899999999986433211 010 001112233457899999999999997643 4688888887
Q ss_pred CC
Q 021928 285 GE 286 (305)
Q Consensus 285 g~ 286 (305)
|.
T Consensus 246 g~ 247 (250)
T PRK12939 246 GF 247 (250)
T ss_pred Cc
Confidence 63
|
|
| >PRK12827 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=5.2e-15 Score=131.14 Aligned_cols=189 Identities=15% Similarity=0.178 Sum_probs=122.8
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcc----hhhh------hcCCCcEEeecCCCCHHHHHHHhc-----
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR----NAME------SFGTYVESMAGDASNKKFLKTALR----- 161 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~----~~~~------~~~~~v~~v~~D~~d~~~~~~~~~----- 161 (305)
++|+++||||+|+||++++++|+++|++|+++.|... ...+ ..+..+.++.+|+.|.+++.++++
T Consensus 5 ~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 84 (249)
T PRK12827 5 DSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAGVEE 84 (249)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 4589999999999999999999999999999776422 1111 113467899999999988887763
Q ss_pred --CccEEEECCcch--------------------------Hhhhhh-----hcCCCEEEEEcccccccCCCCcccccchH
Q 021928 162 --GVRSIICPSEGF--------------------------ISNAGS-----LKGVQHVILLSQLSVYRGSGGIQALMKGN 208 (305)
Q Consensus 162 --~~d~Vi~~~~g~--------------------------~~~~a~-----~~gv~~~V~iSS~~~~~~~~~~~~~~~~~ 208 (305)
++|.|||+++.. +..++. +.+.++||++||...+.+......|...+
T Consensus 85 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~~sK 164 (249)
T PRK12827 85 FGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARRGGRIVNIASVAGVRGNRGQVNYAASK 164 (249)
T ss_pred hCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCeEEEEECCchhcCCCCCCchhHHHH
Confidence 579999884310 122222 45678999999988776555544554433
Q ss_pred HH--HHHHHHHHHHHhCCCCEEEEecCCcccCCCCCcce--eeecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEEEE
Q 021928 209 AR--KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGF--QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEV 282 (305)
Q Consensus 209 ~~--~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~~~~--~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~v 282 (305)
.. ...+.....+...+++++++|||++.......... ............+++|+|+++..++.+.. ..++.+++
T Consensus 165 ~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~ 244 (249)
T PRK12827 165 AGLIGLTKTLANELAPRGITVNAVAPGAINTPMADNAAPTEHLLNPVPVQRLGEPDEVAALVAFLVSDAASYVTGQVIPV 244 (249)
T ss_pred HHHHHHHHHHHHHhhhhCcEEEEEEECCcCCCcccccchHHHHHhhCCCcCCcCHHHHHHHHHHHcCcccCCccCcEEEe
Confidence 21 11122222334568999999999975432211100 00011111234589999999999986543 34788888
Q ss_pred ecC
Q 021928 283 VNG 285 (305)
Q Consensus 283 ~~g 285 (305)
.+|
T Consensus 245 ~~g 247 (249)
T PRK12827 245 DGG 247 (249)
T ss_pred CCC
Confidence 765
|
|
| >TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=99.67 E-value=2.2e-15 Score=133.92 Aligned_cols=189 Identities=14% Similarity=0.159 Sum_probs=126.3
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh------cCCCcEEeecCCCCHHHHHHHhc-------Ccc
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GVR 164 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~~~v~~v~~D~~d~~~~~~~~~-------~~d 164 (305)
++++|||||+|+||++++++|+++|++|++++|+.++..+. .+.++.++.+|+.|.++++++++ ++|
T Consensus 3 ~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~d 82 (250)
T TIGR03206 3 DKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGPVD 82 (250)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 58999999999999999999999999999999987653221 23468899999999988887765 579
Q ss_pred EEEECCcc-----h-------------------------HhhhhhhcCCCEEEEEcccccccCCCCcccccchHHH--HH
Q 021928 165 SIICPSEG-----F-------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--KL 212 (305)
Q Consensus 165 ~Vi~~~~g-----~-------------------------~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~--~~ 212 (305)
++||+++. . +....++.+.++||++||..++.+......|...+.. .+
T Consensus 83 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~iss~~~~~~~~~~~~Y~~sK~a~~~~ 162 (250)
T TIGR03206 83 VLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVNIASDAARVGSSGEAVYAACKGGLVAF 162 (250)
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEECchhhccCCCCCchHHHHHHHHHHH
Confidence 99988431 0 0112234567899999999887665555555443321 11
Q ss_pred HHHHHHHHHhCCCCEEEEecCCcccCCCC--------Ccce--eeecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEE
Q 021928 213 AEQDESMLMASGIPYTIIRTGVLQNTPGG--------KQGF--QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIF 280 (305)
Q Consensus 213 ~~~aE~~l~~~gi~~tilRPg~l~~~~~~--------~~~~--~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~ 280 (305)
.+.....+...++++++++||.+.+.... .+.. .+..........+++|+|+++..++..+. ..++++
T Consensus 163 ~~~la~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~ 242 (250)
T TIGR03206 163 SKTMAREHARHGITVNVVCPGPTDTALLDDICGGAENPEKLREAFTRAIPLGRLGQPDDLPGAILFFSSDDASFITGQVL 242 (250)
T ss_pred HHHHHHHHhHhCcEEEEEecCcccchhHHhhhhccCChHHHHHHHHhcCCccCCcCHHHHHHHHHHHcCcccCCCcCcEE
Confidence 11111223346899999999986433110 0000 00011112235688999999999987643 357899
Q ss_pred EEecCC
Q 021928 281 EVVNGE 286 (305)
Q Consensus 281 ~v~~g~ 286 (305)
.+.+|.
T Consensus 243 ~~~~g~ 248 (250)
T TIGR03206 243 SVSGGL 248 (250)
T ss_pred EeCCCc
Confidence 998764
|
Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. |
| >PRK07060 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=2.7e-15 Score=132.98 Aligned_cols=189 Identities=16% Similarity=0.132 Sum_probs=125.7
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcC-CCcEEeecCCCCHHHHHHHhc---CccEEEECCcc
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG-TYVESMAGDASNKKFLKTALR---GVRSIICPSEG 172 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~-~~v~~v~~D~~d~~~~~~~~~---~~d~Vi~~~~g 172 (305)
.+++++||||+|+||++++++|+++|++|++++|++++..+... .++.++.+|++|.+.+.++++ .+|+|||+++.
T Consensus 8 ~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~d~vi~~ag~ 87 (245)
T PRK07060 8 SGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGETGCEPLRLDVGDDAAIRAALAAAGAFDGLVNCAGI 87 (245)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeEEEecCCCHHHHHHHHHHhCCCCEEEECCCC
Confidence 45899999999999999999999999999999998766433221 246788999999888888776 47999988431
Q ss_pred h--------------------------Hhhh----hhhcC-CCEEEEEcccccccCCCCcccccchHHH--HHHHHHHHH
Q 021928 173 F--------------------------ISNA----GSLKG-VQHVILLSQLSVYRGSGGIQALMKGNAR--KLAEQDESM 219 (305)
Q Consensus 173 ~--------------------------~~~~----a~~~g-v~~~V~iSS~~~~~~~~~~~~~~~~~~~--~~~~~aE~~ 219 (305)
. +..+ ..+.+ .++||++||...+.+......|...+.. ...+.....
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~~sK~a~~~~~~~~a~~ 167 (245)
T PRK07060 88 ASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALVGLPDHLAYCASKAALDAITRVLCVE 167 (245)
T ss_pred CCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcCCCCCCcHhHHHHHHHHHHHHHHHHH
Confidence 0 1111 11222 4789999998877665554455443321 111111122
Q ss_pred HHhCCCCEEEEecCCcccCCCCC---cc---eeeecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEEEEecC
Q 021928 220 LMASGIPYTIIRTGVLQNTPGGK---QG---FQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVNG 285 (305)
Q Consensus 220 l~~~gi~~tilRPg~l~~~~~~~---~~---~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~v~~g 285 (305)
+...+++++.++||.+....... .. ..+........+++.+|+|++++.++..+. ..|+.+++.+|
T Consensus 168 ~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~~~G~~~~~~~g 241 (245)
T PRK07060 168 LGPHGIRVNSVNPTVTLTPMAAEAWSDPQKSGPMLAAIPLGRFAEVDDVAAPILFLLSDAASMVSGVSLPVDGG 241 (245)
T ss_pred HhhhCeEEEEEeeCCCCCchhhhhccCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCcccCCccCcEEeECCC
Confidence 33468999999999865432110 00 000011223567899999999999997654 35888888765
|
|
| >PRK07067 sorbitol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=2.8e-15 Score=134.23 Aligned_cols=189 Identities=14% Similarity=0.143 Sum_probs=125.4
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh---hcCCCcEEeecCCCCHHHHHHHhc-------CccEEE
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALR-------GVRSII 167 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~---~~~~~v~~v~~D~~d~~~~~~~~~-------~~d~Vi 167 (305)
.++++||||+|+||++++++|+++|++|+++.|+.+...+ .....+.++.+|++|.+++.++++ .+|++|
T Consensus 6 ~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li 85 (257)
T PRK07067 6 GKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVERFGGIDILF 85 (257)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 5899999999999999999999999999999998765332 233468889999999988877665 579999
Q ss_pred ECCcch--------------------------Hhhhhh----hc-CCCEEEEEcccccccCCCCcccccchHH--HHHHH
Q 021928 168 CPSEGF--------------------------ISNAGS----LK-GVQHVILLSQLSVYRGSGGIQALMKGNA--RKLAE 214 (305)
Q Consensus 168 ~~~~g~--------------------------~~~~a~----~~-gv~~~V~iSS~~~~~~~~~~~~~~~~~~--~~~~~ 214 (305)
|+++.. +.+++. +. .-.+||++||.....+..+...|...+. ..+.+
T Consensus 86 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~ 165 (257)
T PRK07067 86 NNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRRGEALVSHYCATKAAVISYTQ 165 (257)
T ss_pred ECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhCCCCCCCchhhhhHHHHHHHHH
Confidence 883310 111111 11 2258999999765544444445544332 11122
Q ss_pred HHHHHHHhCCCCEEEEecCCcccCCCCC--------cc-------eeeecCCCCCCccCHHHHHHHHHHHhhCCC--CCC
Q 021928 215 QDESMLMASGIPYTIIRTGVLQNTPGGK--------QG-------FQFEEGCAANGSLSKEDAAFICVEALESIP--QTG 277 (305)
Q Consensus 215 ~aE~~l~~~gi~~tilRPg~l~~~~~~~--------~~-------~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~ 277 (305)
.....+...+++++.|+||++....... .. ..+........+.+++|+|++++.++..+. ..+
T Consensus 166 ~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~g 245 (257)
T PRK07067 166 SAALALIRHGINVNAIAPGVVDTPMWDQVDALFARYENRPPGEKKRLVGEAVPLGRMGVPDDLTGMALFLASADADYIVA 245 (257)
T ss_pred HHHHHhcccCeEEEEEeeCcccchhhhhhhhhhhhccCCCHHHHHHHHhhcCCCCCccCHHHHHHHHHHHhCcccccccC
Confidence 2222334579999999999964321100 00 001112233567889999999999997654 358
Q ss_pred cEEEEecCC
Q 021928 278 LIFEVVNGE 286 (305)
Q Consensus 278 ~~~~v~~g~ 286 (305)
++|++.+|.
T Consensus 246 ~~~~v~gg~ 254 (257)
T PRK07067 246 QTYNVDGGN 254 (257)
T ss_pred cEEeecCCE
Confidence 999998774
|
|
| >PRK10538 malonic semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=3.8e-15 Score=132.88 Aligned_cols=177 Identities=14% Similarity=0.087 Sum_probs=117.6
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh---cCCCcEEeecCCCCHHHHHHHhc-------CccEEEE
Q 021928 99 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALR-------GVRSIIC 168 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~~~~v~~v~~D~~d~~~~~~~~~-------~~d~Vi~ 168 (305)
|+|+||||+|+||++++++|+++|++|++++|++++.... .+.++.++.+|++|.+++.++++ ++|.|||
T Consensus 1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi~ 80 (248)
T PRK10538 1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVLVN 80 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 6899999999999999999999999999999998664332 34468899999999988877664 6899998
Q ss_pred CCcch-------------------------------HhhhhhhcCCCEEEEEcccccccCCCCcccccchHHH--HHHHH
Q 021928 169 PSEGF-------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--KLAEQ 215 (305)
Q Consensus 169 ~~~g~-------------------------------~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~--~~~~~ 215 (305)
+++.. +...+++.+.++||++||.....+..+...|...+.. .+.+.
T Consensus 81 ~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~~~~~~~~~ 160 (248)
T PRK10538 81 NAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLN 160 (248)
T ss_pred CCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCcccCCCCCCCchhHHHHHHHHHHHHH
Confidence 74310 1112344667899999998776554444444433221 11111
Q ss_pred HHHHHHhCCCCEEEEecCCcccCCC-C----CcceeeecCCCCCCccCHHHHHHHHHHHhhCCCC
Q 021928 216 DESMLMASGIPYTIIRTGVLQNTPG-G----KQGFQFEEGCAANGSLSKEDAAFICVEALESIPQ 275 (305)
Q Consensus 216 aE~~l~~~gi~~tilRPg~l~~~~~-~----~~~~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~~ 275 (305)
....+...++.+++++||.+.+... . ..............+++++|+|++++.++..+..
T Consensus 161 l~~~~~~~~i~v~~v~pg~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~~~~~~ 225 (248)
T PRK10538 161 LRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDDGKAEKTYQNTVALTPEDVSEAVWWVATLPAH 225 (248)
T ss_pred HHHHhcCCCcEEEEEeCCeecccccchhhccCcHHHHHhhccccCCCCHHHHHHHHHHHhcCCCc
Confidence 1222334689999999999742211 1 0000000000123568999999999999976653
|
|
| >PRK06841 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=5.3e-15 Score=132.07 Aligned_cols=191 Identities=17% Similarity=0.131 Sum_probs=126.2
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhh---hhcCCCcEEeecCCCCHHHHHHHhc-------CccE
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM---ESFGTYVESMAGDASNKKFLKTALR-------GVRS 165 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~---~~~~~~v~~v~~D~~d~~~~~~~~~-------~~d~ 165 (305)
...++|+||||+|+||++++++|+++|++|++++|++.... +.....+.++.+|+++.+++.++++ .+|+
T Consensus 13 ~~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~ 92 (255)
T PRK06841 13 LSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVAEVAAQLLGGNAKGLVCDVSDSQSVEAAVAAVISAFGRIDI 92 (255)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence 34689999999999999999999999999999999865421 1122356789999999988877664 5699
Q ss_pred EEECCcch--------------------------Hhhh----hhhcCCCEEEEEcccccccCCCCcccccchHHH--HHH
Q 021928 166 IICPSEGF--------------------------ISNA----GSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--KLA 213 (305)
Q Consensus 166 Vi~~~~g~--------------------------~~~~----a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~--~~~ 213 (305)
|||+++.. +..+ .++.+.++||++||.....+......|...+.. .+.
T Consensus 93 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~ 172 (255)
T PRK06841 93 LVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQAGVVALERHVAYCASKAGVVGMT 172 (255)
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcchhhccCCCCCchHHHHHHHHHHHH
Confidence 99884310 1111 223456799999998765554444445443321 111
Q ss_pred HHHHHHHHhCCCCEEEEecCCcccCCCCC-----cceeeecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEEEEecCC
Q 021928 214 EQDESMLMASGIPYTIIRTGVLQNTPGGK-----QGFQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVNGE 286 (305)
Q Consensus 214 ~~aE~~l~~~gi~~tilRPg~l~~~~~~~-----~~~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~v~~g~ 286 (305)
+.....+...++.++.|+||++....... ....+........+.+++|+|++++.++..+. ..|+.+.+.+|.
T Consensus 173 ~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~i~~dgg~ 252 (255)
T PRK06841 173 KVLALEWGPYGITVNAISPTVVLTELGKKAWAGEKGERAKKLIPAGRFAYPEEIAAAALFLASDAAAMITGENLVIDGGY 252 (255)
T ss_pred HHHHHHHHhhCeEEEEEEeCcCcCcccccccchhHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCccCCEEEECCCc
Confidence 22222334578999999999965432211 00001111123457799999999999997654 367888887663
|
|
| >PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=6.4e-15 Score=130.41 Aligned_cols=191 Identities=13% Similarity=0.076 Sum_probs=125.7
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEE-EcCcchhhhh------cCCCcEEeecCCCCHHHHHHHhc-------
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKAL-VKDKRNAMES------FGTYVESMAGDASNKKFLKTALR------- 161 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~-~R~~~~~~~~------~~~~v~~v~~D~~d~~~~~~~~~------- 161 (305)
.++++|+||||+|+||++++++|+++|++|+++ .|++++.... .+.++.++.+|++|.+++.++++
T Consensus 3 ~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 82 (247)
T PRK05565 3 LMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKFG 82 (247)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhC
Confidence 346899999999999999999999999999998 8876543211 23458899999999988877665
Q ss_pred CccEEEECCcch--------------------------Hh----hhhhhcCCCEEEEEcccccccCCCCcccccchHH--
Q 021928 162 GVRSIICPSEGF--------------------------IS----NAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA-- 209 (305)
Q Consensus 162 ~~d~Vi~~~~g~--------------------------~~----~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~-- 209 (305)
++|+|||+++.. +. ....+.+.++||++||.....+......|...+.
T Consensus 83 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~~~~~y~~sK~a~ 162 (247)
T PRK05565 83 KIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNISSIWGLIGASCEVLYSASKGAV 162 (247)
T ss_pred CCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCHhhccCCCCccHHHHHHHHH
Confidence 789999884310 11 1123345678999999877655444434433221
Q ss_pred HHHHHHHHHHHHhCCCCEEEEecCCcccCCCCCcc----eeeecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEEEEe
Q 021928 210 RKLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQG----FQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVV 283 (305)
Q Consensus 210 ~~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~~~----~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~v~ 283 (305)
....+.....+...++.++.++||++......... ..+..........+.+|+|++++.++.... ..++.+.+.
T Consensus 163 ~~~~~~~~~~~~~~gi~~~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~~ 242 (247)
T PRK05565 163 NAFTKALAKELAPSGIRVNAVAPGAIDTEMWSSFSEEDKEGLAEEIPLGRLGKPEEIAKVVLFLASDDASYITGQIITVD 242 (247)
T ss_pred HHHHHHHHHHHHHcCeEEEEEEECCccCccccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCCccCCccCcEEEec
Confidence 11112222234467999999999997543221100 000001122345789999999999997644 467888888
Q ss_pred cCC
Q 021928 284 NGE 286 (305)
Q Consensus 284 ~g~ 286 (305)
++.
T Consensus 243 ~~~ 245 (247)
T PRK05565 243 GGW 245 (247)
T ss_pred CCc
Confidence 763
|
|
| >PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=1.3e-14 Score=130.03 Aligned_cols=188 Identities=13% Similarity=0.111 Sum_probs=119.9
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchh--hhh---cCCCcEEeecCCCCHHHHHHHhc-------Ccc
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA--MES---FGTYVESMAGDASNKKFLKTALR-------GVR 164 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~--~~~---~~~~v~~v~~D~~d~~~~~~~~~-------~~d 164 (305)
.+++++||||+|+||++++++|+++|++|+++.|++... .+. .+..+.++.+|++|.+++.++++ ++|
T Consensus 7 ~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 86 (260)
T PRK12823 7 AGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSELVHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAFGRID 86 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchHHHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHcCCCe
Confidence 358999999999999999999999999999999975321 111 23457789999999877766554 579
Q ss_pred EEEECCcch-------------------------------HhhhhhhcCCCEEEEEcccccccCCCCcccccchHH--HH
Q 021928 165 SIICPSEGF-------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA--RK 211 (305)
Q Consensus 165 ~Vi~~~~g~-------------------------------~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~--~~ 211 (305)
++||+++.. +...+++.+..+||++||...+.. ....|..++. ..
T Consensus 87 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~--~~~~Y~~sK~a~~~ 164 (260)
T PRK12823 87 VLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGGGAIVNVSSIATRGI--NRVPYSAAKGGVNA 164 (260)
T ss_pred EEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEcCccccCC--CCCccHHHHHHHHH
Confidence 999874310 111233456679999999876532 2223433221 11
Q ss_pred HHHHHHHHHHhCCCCEEEEecCCcccCCCC--------Cc--ceee-------ecCCCCCCccCHHHHHHHHHHHhhCCC
Q 021928 212 LAEQDESMLMASGIPYTIIRTGVLQNTPGG--------KQ--GFQF-------EEGCAANGSLSKEDAAFICVEALESIP 274 (305)
Q Consensus 212 ~~~~aE~~l~~~gi~~tilRPg~l~~~~~~--------~~--~~~~-------~~~~~~~~~Is~~DvA~~iv~~l~~~~ 274 (305)
+.+.....+...+++++.|+||++...... .. ...+ ........+.+++|+|++++.++.+..
T Consensus 165 ~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~ 244 (260)
T PRK12823 165 LTASLAFEYAEHGIRVNAVAPGGTEAPPRRVPRNAAPQSEQEKAWYQQIVDQTLDSSLMKRYGTIDEQVAAILFLASDEA 244 (260)
T ss_pred HHHHHHHHhcccCcEEEEEecCccCCcchhhHHhhccccccccccHHHHHHHHhccCCcccCCCHHHHHHHHHHHcCccc
Confidence 111112223446899999999996543110 00 0000 001111234578999999999986543
Q ss_pred --CCCcEEEEecCC
Q 021928 275 --QTGLIFEVVNGE 286 (305)
Q Consensus 275 --~~~~~~~v~~g~ 286 (305)
..++.+++.+|+
T Consensus 245 ~~~~g~~~~v~gg~ 258 (260)
T PRK12823 245 SYITGTVLPVGGGD 258 (260)
T ss_pred ccccCcEEeecCCC
Confidence 357899998765
|
|
| >PRK08628 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=6e-15 Score=132.04 Aligned_cols=196 Identities=14% Similarity=0.120 Sum_probs=128.2
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhh--h---hcCCCcEEeecCCCCHHHHHHHhc-------Cc
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM--E---SFGTYVESMAGDASNKKFLKTALR-------GV 163 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~--~---~~~~~v~~v~~D~~d~~~~~~~~~-------~~ 163 (305)
..+++++||||+|+||++++++|+++|++|++++|++++.. + ..+.++.++.+|+++.+++.++++ ++
T Consensus 5 l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 84 (258)
T PRK08628 5 LKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDDEFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKFGRI 84 (258)
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence 44689999999999999999999999999999999876531 1 123468899999999988887775 57
Q ss_pred cEEEECCcch-------------------------Hhhhhh---hcCCCEEEEEcccccccCCCCcccccchHH--HHHH
Q 021928 164 RSIICPSEGF-------------------------ISNAGS---LKGVQHVILLSQLSVYRGSGGIQALMKGNA--RKLA 213 (305)
Q Consensus 164 d~Vi~~~~g~-------------------------~~~~a~---~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~--~~~~ 213 (305)
|.|||+++.. +...+. +.+.++||++||..+..+......|..++. ..+.
T Consensus 85 d~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~~ 164 (258)
T PRK08628 85 DGLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKASRGAIVNISSKTALTGQGGTSGYAAAKGAQLALT 164 (258)
T ss_pred CEEEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhccCcEEEEECCHHhccCCCCCchhHHHHHHHHHHH
Confidence 9999884410 001111 123468999999877765555555544332 1112
Q ss_pred HHHHHHHHhCCCCEEEEecCCcccCCCC------Ccc-eee----ecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEE
Q 021928 214 EQDESMLMASGIPYTIIRTGVLQNTPGG------KQG-FQF----EEGCAANGSLSKEDAAFICVEALESIP--QTGLIF 280 (305)
Q Consensus 214 ~~aE~~l~~~gi~~tilRPg~l~~~~~~------~~~-~~~----~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~ 280 (305)
+.....+...+++++.|+||.+...... ... ... .........++++|+|++++.++.... ..++.+
T Consensus 165 ~~l~~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~ 244 (258)
T PRK08628 165 REWAVALAKDGVRVNAVIPAEVMTPLYENWIATFDDPEAKLAAITAKIPLGHRMTTAEEIADTAVFLLSERSSHTTGQWL 244 (258)
T ss_pred HHHHHHHhhcCeEEEEEecCccCCHHHHHHhhhccCHHHHHHHHHhcCCccccCCCHHHHHHHHHHHhChhhccccCceE
Confidence 2222334457899999999986432110 000 000 000111246889999999999997643 457888
Q ss_pred EEecCCcCHHH
Q 021928 281 EVVNGEEKVSD 291 (305)
Q Consensus 281 ~v~~g~~s~~d 291 (305)
.+.++...+++
T Consensus 245 ~~~gg~~~~~~ 255 (258)
T PRK08628 245 FVDGGYVHLDR 255 (258)
T ss_pred EecCCcccccc
Confidence 88777544443
|
|
| >PRK12746 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=9.2e-15 Score=130.44 Aligned_cols=189 Identities=18% Similarity=0.131 Sum_probs=121.7
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEE-EcCcchhhhh------cCCCcEEeecCCCCHHHHHHHhc--------
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKAL-VKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------- 161 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~-~R~~~~~~~~------~~~~v~~v~~D~~d~~~~~~~~~-------- 161 (305)
+.++|+||||+|+||++++++|+++|++|+++ .|+.++..+. .+..+.++.+|++|.+++.++++
T Consensus 5 ~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~ 84 (254)
T PRK12746 5 DGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNELQI 84 (254)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHhcc
Confidence 35899999999999999999999999999875 5665442211 12457889999999998877665
Q ss_pred -----CccEEEECCcc----h----------------------Hhhhhhh--cCCCEEEEEcccccccCCCCcccccchH
Q 021928 162 -----GVRSIICPSEG----F----------------------ISNAGSL--KGVQHVILLSQLSVYRGSGGIQALMKGN 208 (305)
Q Consensus 162 -----~~d~Vi~~~~g----~----------------------~~~~a~~--~gv~~~V~iSS~~~~~~~~~~~~~~~~~ 208 (305)
++|++||+++. . +.+.+.. ...++||++||..++.+..+...|..++
T Consensus 85 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~sS~~~~~~~~~~~~Y~~sK 164 (254)
T PRK12746 85 RVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAEGRVINISSAEVRLGFTGSIAYGLSK 164 (254)
T ss_pred ccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECCHHhcCCCCCCcchHhhH
Confidence 47999988431 0 0111111 2235899999988876655555554433
Q ss_pred HHH--HHHHHHHHHHhCCCCEEEEecCCcccCCCC----Ccce-eee-cCCCCCCccCHHHHHHHHHHHhhCCC--CCCc
Q 021928 209 ARK--LAEQDESMLMASGIPYTIIRTGVLQNTPGG----KQGF-QFE-EGCAANGSLSKEDAAFICVEALESIP--QTGL 278 (305)
Q Consensus 209 ~~~--~~~~aE~~l~~~gi~~tilRPg~l~~~~~~----~~~~-~~~-~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~ 278 (305)
... +.+.....+...++++++++||++...... .... .+. .......+++++|+|+++..++.++. ..++
T Consensus 165 ~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~ 244 (254)
T PRK12746 165 GALNTMTLPLAKHLGERGITVNTIMPGYTKTDINAKLLDDPEIRNFATNSSVFGRIGQVEDIADAVAFLASSDSRWVTGQ 244 (254)
T ss_pred HHHHHHHHHHHHHHhhcCcEEEEEEECCccCcchhhhccChhHHHHHHhcCCcCCCCCHHHHHHHHHHHcCcccCCcCCC
Confidence 211 111112223457899999999996433211 0000 000 11112345689999999998887653 3578
Q ss_pred EEEEecC
Q 021928 279 IFEVVNG 285 (305)
Q Consensus 279 ~~~v~~g 285 (305)
.|++.++
T Consensus 245 ~~~i~~~ 251 (254)
T PRK12746 245 IIDVSGG 251 (254)
T ss_pred EEEeCCC
Confidence 9998765
|
|
| >PRK07024 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=6.3e-15 Score=132.11 Aligned_cols=170 Identities=15% Similarity=0.123 Sum_probs=116.4
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh---cC--CCcEEeecCCCCHHHHHHHhcC-------ccE
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FG--TYVESMAGDASNKKFLKTALRG-------VRS 165 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~~--~~v~~v~~D~~d~~~~~~~~~~-------~d~ 165 (305)
+++|+||||+|+||++++++|+++|++|+++.|+++...+. .. .++.++.+|++|.+++.++++. +|+
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~ 81 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAAHGLPDV 81 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHhCCCCCE
Confidence 58999999999999999999999999999999987654322 11 1588999999999888776653 699
Q ss_pred EEECCcc----h---------------------------HhhhhhhcCCCEEEEEcccccccCCCCcccccchHHH--HH
Q 021928 166 IICPSEG----F---------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--KL 212 (305)
Q Consensus 166 Vi~~~~g----~---------------------------~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~--~~ 212 (305)
+|++++. . +...+++.+.++||++||.....+.+....|...+.. .+
T Consensus 82 lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asK~a~~~~ 161 (257)
T PRK07024 82 VIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAARRGTLVGIASVAGVRGLPGAGAYSASKAAAIKY 161 (257)
T ss_pred EEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCCCCCcchHHHHHHHHHH
Confidence 9987321 0 1112345566899999998776655544455443321 11
Q ss_pred HHHHHHHHHhCCCCEEEEecCCcccCCCCCcceeeecCCCCCCccCHHHHHHHHHHHhhCC
Q 021928 213 AEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESI 273 (305)
Q Consensus 213 ~~~aE~~l~~~gi~~tilRPg~l~~~~~~~~~~~~~~~~~~~~~Is~~DvA~~iv~~l~~~ 273 (305)
.+.....++..+++++.++||.+......... + .....++++|+|+.++.++.+.
T Consensus 162 ~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~--~----~~~~~~~~~~~a~~~~~~l~~~ 216 (257)
T PRK07024 162 LESLRVELRPAGVRVVTIAPGYIRTPMTAHNP--Y----PMPFLMDADRFAARAARAIARG 216 (257)
T ss_pred HHHHHHHhhccCcEEEEEecCCCcCchhhcCC--C----CCCCccCHHHHHHHHHHHHhCC
Confidence 12222234567999999999997543211110 1 1112478999999999999754
|
|
| >TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase | Back alignment and domain information |
|---|
Probab=99.65 E-value=7.6e-15 Score=130.52 Aligned_cols=189 Identities=16% Similarity=0.186 Sum_probs=122.2
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcch-hh---hhcCCCcEEeecCCCCHHHHHHHhc-------CccE
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-AM---ESFGTYVESMAGDASNKKFLKTALR-------GVRS 165 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~-~~---~~~~~~v~~v~~D~~d~~~~~~~~~-------~~d~ 165 (305)
.+++|+||||+|+||++++++|+++|++|+++.|+... .. ...+.++.++.+|++|.+++..+++ ++|+
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~ 83 (248)
T TIGR01832 4 EGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPSETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEFGHIDI 83 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 45999999999999999999999999999999997532 11 1224468899999999988876553 5799
Q ss_pred EEECCcch--------------------------Hhhhh----hhcC-CCEEEEEcccccccCCCCcccccchHHH--HH
Q 021928 166 IICPSEGF--------------------------ISNAG----SLKG-VQHVILLSQLSVYRGSGGIQALMKGNAR--KL 212 (305)
Q Consensus 166 Vi~~~~g~--------------------------~~~~a----~~~g-v~~~V~iSS~~~~~~~~~~~~~~~~~~~--~~ 212 (305)
+||+++.. +.+++ .+.+ ..++|++||..++.+......|...++. .+
T Consensus 84 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sKaa~~~~ 163 (248)
T TIGR01832 84 LVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQGGIRVPSYTASKHGVAGL 163 (248)
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhccCCCCCchhHHHHHHHHHH
Confidence 99874310 11111 1233 4689999998877655444455443321 11
Q ss_pred HHHHHHHHHhCCCCEEEEecCCcccCCCCC-cc--e---eeecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEEEEec
Q 021928 213 AEQDESMLMASGIPYTIIRTGVLQNTPGGK-QG--F---QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVN 284 (305)
Q Consensus 213 ~~~aE~~l~~~gi~~tilRPg~l~~~~~~~-~~--~---~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~v~~ 284 (305)
.+.....+...+++++.++||++....... .. . .+........+++++|+|++++.++.... ..|+++.+.+
T Consensus 164 ~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dg 243 (248)
T TIGR01832 164 TKLLANEWAAKGINVNAIAPGYMATNNTQALRADEDRNAAILERIPAGRWGTPDDIGGPAVFLASSASDYVNGYTLAVDG 243 (248)
T ss_pred HHHHHHHhCccCcEEEEEEECcCcCcchhccccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCcCCcEEEeCC
Confidence 111112233468999999999965332110 00 0 00011123467899999999999997544 3477777765
Q ss_pred C
Q 021928 285 G 285 (305)
Q Consensus 285 g 285 (305)
|
T Consensus 244 g 244 (248)
T TIGR01832 244 G 244 (248)
T ss_pred C
Confidence 5
|
This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation. |
| >PRK05650 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=5.8e-15 Score=133.29 Aligned_cols=175 Identities=12% Similarity=0.088 Sum_probs=118.6
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh------cCCCcEEeecCCCCHHHHHHHhc-------CccE
Q 021928 99 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GVRS 165 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~~~v~~v~~D~~d~~~~~~~~~-------~~d~ 165 (305)
|+|+||||+|+||++++++|+++|++|+++.|+.++..+. .+.++.++.+|++|.+++.++++ ++|+
T Consensus 1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~ 80 (270)
T PRK05650 1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDV 80 (270)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 5799999999999999999999999999999987653321 23468889999999888877664 6899
Q ss_pred EEECCcc----h--------------------------HhhhhhhcCCCEEEEEcccccccCCCCcccccchHHH--HHH
Q 021928 166 IICPSEG----F--------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--KLA 213 (305)
Q Consensus 166 Vi~~~~g----~--------------------------~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~--~~~ 213 (305)
|||+++. . +...+++.+..+||++||..+..+......|..+++. .+.
T Consensus 81 lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sKaa~~~~~ 160 (270)
T PRK05650 81 IVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQKSGRIVNIASMAGLMQGPAMSSYNVAKAGVVALS 160 (270)
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEECChhhcCCCCCchHHHHHHHHHHHHH
Confidence 9988331 0 1122345667899999998877665555555443321 112
Q ss_pred HHHHHHHHhCCCCEEEEecCCcccCCCCC-c--ceeee---cCCCCCCccCHHHHHHHHHHHhhCC
Q 021928 214 EQDESMLMASGIPYTIIRTGVLQNTPGGK-Q--GFQFE---EGCAANGSLSKEDAAFICVEALESI 273 (305)
Q Consensus 214 ~~aE~~l~~~gi~~tilRPg~l~~~~~~~-~--~~~~~---~~~~~~~~Is~~DvA~~iv~~l~~~ 273 (305)
+.....+...++++++++||++....... . ..... ........++++|+|+.++.++.+.
T Consensus 161 ~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vA~~i~~~l~~~ 226 (270)
T PRK05650 161 ETLLVELADDEIGVHVVCPSFFQTNLLDSFRGPNPAMKAQVGKLLEKSPITAADIADYIYQQVAKG 226 (270)
T ss_pred HHHHHHhcccCcEEEEEecCccccCcccccccCchhHHHHHHHHhhcCCCCHHHHHHHHHHHHhCC
Confidence 22223344579999999999975432211 0 00000 0011234689999999999999864
|
|
| >PRK08017 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=6.4e-15 Score=131.50 Aligned_cols=178 Identities=19% Similarity=0.131 Sum_probs=117.4
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhc--------CccEEEEC
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--------GVRSIICP 169 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~--------~~d~Vi~~ 169 (305)
.++|+||||+|+||++++++|+++|++|+++.|++++.......+++++.+|+.|.+++..+++ .+|.++++
T Consensus 2 ~k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~ii~~ 81 (256)
T PRK08017 2 QKSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMNSLGFTGILLDLDDPESVERAADEVIALTDNRLYGLFNN 81 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHHhCCCeEEEeecCCHHHHHHHHHHHHHhcCCCCeEEEEC
Confidence 3689999999999999999999999999999999876543333457889999999887765543 35778877
Q ss_pred Ccc----h--------------------------HhhhhhhcCCCEEEEEcccccccCCCCcccccchHHH--HHHHHHH
Q 021928 170 SEG----F--------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--KLAEQDE 217 (305)
Q Consensus 170 ~~g----~--------------------------~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~--~~~~~aE 217 (305)
++. . +.+.+++.+.+++|++||..+..+......|...+.. .+.+...
T Consensus 82 ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~~~~~~~~~l~ 161 (256)
T PRK08017 82 AGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHGEGRIVMTSSVMGLISTPGRGAYAASKYALEAWSDALR 161 (256)
T ss_pred CCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCEEEEEcCcccccCCCCccHHHHHHHHHHHHHHHHH
Confidence 321 0 1233455677899999998666554444444433221 1111122
Q ss_pred HHHHhCCCCEEEEecCCcccCCC-C---Cc-ceee-ecCCCCCCccCHHHHHHHHHHHhhCCCC
Q 021928 218 SMLMASGIPYTIIRTGVLQNTPG-G---KQ-GFQF-EEGCAANGSLSKEDAAFICVEALESIPQ 275 (305)
Q Consensus 218 ~~l~~~gi~~tilRPg~l~~~~~-~---~~-~~~~-~~~~~~~~~Is~~DvA~~iv~~l~~~~~ 275 (305)
.++...++++++++||.+..... . .. ...+ ..+.....+++++|+|+.+..+++++..
T Consensus 162 ~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~~~~ 225 (256)
T PRK08017 162 MELRHSGIKVSLIEPGPIRTRFTDNVNQTQSDKPVENPGIAARFTLGPEAVVPKLRHALESPKP 225 (256)
T ss_pred HHHhhcCCEEEEEeCCCcccchhhcccchhhccchhhhHHHhhcCCCHHHHHHHHHHHHhCCCC
Confidence 33456789999999998643211 0 00 0000 0111123468999999999999987654
|
|
| >PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.3e-14 Score=129.17 Aligned_cols=188 Identities=14% Similarity=0.094 Sum_probs=125.0
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcC-------ccEEEE
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRG-------VRSIIC 168 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~-------~d~Vi~ 168 (305)
..++++|||||+|+||++++++|+++|++|+++.|+. ....+..+.++.+|+.|.+++.++++. +|+||+
T Consensus 6 ~~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~---~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~ 82 (252)
T PRK08220 6 FSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF---LTQEDYPFATFVLDVSDAAAVAQVCQRLLAETGPLDVLVN 82 (252)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch---hhhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 3458999999999999999999999999999999986 122345688999999999888887753 799998
Q ss_pred CCcch--------------------------Hhhh----hhhcCCCEEEEEcccccccCCCCcccccchHH--HHHHHHH
Q 021928 169 PSEGF--------------------------ISNA----GSLKGVQHVILLSQLSVYRGSGGIQALMKGNA--RKLAEQD 216 (305)
Q Consensus 169 ~~~g~--------------------------~~~~----a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~--~~~~~~a 216 (305)
+++.. +..+ .++.+..+||++||.....+......|..++. ..+.+..
T Consensus 83 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~~l 162 (252)
T PRK08220 83 AAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGSNAAHVPRIGMAAYGASKAALTSLAKCV 162 (252)
T ss_pred CCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECCchhccCCCCCchhHHHHHHHHHHHHHH
Confidence 83310 1111 22345568999999877655544455544332 1111222
Q ss_pred HHHHHhCCCCEEEEecCCcccCCCC----C----cce------eeecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEE
Q 021928 217 ESMLMASGIPYTIIRTGVLQNTPGG----K----QGF------QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIF 280 (305)
Q Consensus 217 E~~l~~~gi~~tilRPg~l~~~~~~----~----~~~------~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~ 280 (305)
...+...++++++++||.+...... . ... .+........+++++|+|++++.++.+.. ..++++
T Consensus 163 a~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~i 242 (252)
T PRK08220 163 GLELAPYGVRCNVVSPGSTDTDMQRTLWVDEDGEQQVIAGFPEQFKLGIPLGKIARPQEIANAVLFLASDLASHITLQDI 242 (252)
T ss_pred HHHhhHhCeEEEEEecCcCcchhhhhhccchhhhhhhhhhHHHHHhhcCCCcccCCHHHHHHHHHHHhcchhcCccCcEE
Confidence 2233457899999999986433210 0 000 00111123457889999999999996543 457777
Q ss_pred EEecCC
Q 021928 281 EVVNGE 286 (305)
Q Consensus 281 ~v~~g~ 286 (305)
.+.+|.
T Consensus 243 ~~~gg~ 248 (252)
T PRK08220 243 VVDGGA 248 (252)
T ss_pred EECCCe
Confidence 777663
|
|
| >PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.1e-14 Score=130.48 Aligned_cols=190 Identities=16% Similarity=0.141 Sum_probs=123.5
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh-------cC-CCcEEeecCCCCHHHHHHHhc-------C
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------FG-TYVESMAGDASNKKFLKTALR-------G 162 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~-------~~-~~v~~v~~D~~d~~~~~~~~~-------~ 162 (305)
.++|+||||+|+||++++++|+++|++|+++.|+.....+. .+ .++.++.+|++|.+++.++++ .
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~ 81 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGR 81 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 57999999999999999999999999999999986542211 11 358899999999888776654 5
Q ss_pred ccEEEECCcch------------------------------HhhhhhhcC-CCEEEEEcccccccCCCCcccccchHHH-
Q 021928 163 VRSIICPSEGF------------------------------ISNAGSLKG-VQHVILLSQLSVYRGSGGIQALMKGNAR- 210 (305)
Q Consensus 163 ~d~Vi~~~~g~------------------------------~~~~a~~~g-v~~~V~iSS~~~~~~~~~~~~~~~~~~~- 210 (305)
+|++||+++.. +...+.+.+ -.+||++||.....+......|...++.
T Consensus 82 id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sKaa~ 161 (259)
T PRK12384 82 VDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGSKHNSGYSAAKFGG 161 (259)
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCcccccCCCCCchhHHHHHHH
Confidence 69999884310 011122344 3589999987654443333444443321
Q ss_pred -HHHHHHHHHHHhCCCCEEEEecCCcccCCCCCc---------c----e---eeecCCCCCCccCHHHHHHHHHHHhhCC
Q 021928 211 -KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQ---------G----F---QFEEGCAANGSLSKEDAAFICVEALESI 273 (305)
Q Consensus 211 -~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~~---------~----~---~~~~~~~~~~~Is~~DvA~~iv~~l~~~ 273 (305)
.+.+.....+...+++++.++||.+.+.+.... + . .+........+++++|++.+++.++.+.
T Consensus 162 ~~l~~~la~e~~~~gi~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~l~~~~ 241 (259)
T PRK12384 162 VGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQSLLPQYAKKLGIKPDEVEQYYIDKVPLKRGCDYQDVLNMLLFYASPK 241 (259)
T ss_pred HHHHHHHHHHHHHcCcEEEEEecCCcccchhhhhhhHHHHHhcCCChHHHHHHHHHhCcccCCCCHHHHHHHHHHHcCcc
Confidence 111222233456899999999997532221000 0 0 0011223356789999999999998754
Q ss_pred C--CCCcEEEEecCCc
Q 021928 274 P--QTGLIFEVVNGEE 287 (305)
Q Consensus 274 ~--~~~~~~~v~~g~~ 287 (305)
. ..|++|++.+|..
T Consensus 242 ~~~~~G~~~~v~~g~~ 257 (259)
T PRK12384 242 ASYCTGQSINVTGGQV 257 (259)
T ss_pred cccccCceEEEcCCEE
Confidence 3 3589999998764
|
|
| >PRK08339 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=6.4e-15 Score=132.87 Aligned_cols=190 Identities=14% Similarity=0.132 Sum_probs=127.3
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh-------cCCCcEEeecCCCCHHHHHHHhc------Cc
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------FGTYVESMAGDASNKKFLKTALR------GV 163 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~-------~~~~v~~v~~D~~d~~~~~~~~~------~~ 163 (305)
.+++++||||+|+||++++++|+++|++|++++|+.++..+. .+.++.++.+|++|.+++.++++ .+
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~g~i 86 (263)
T PRK08339 7 SGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELKNIGEP 86 (263)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHHhhCCC
Confidence 468999999999999999999999999999999987653221 13468899999999988877765 47
Q ss_pred cEEEECCcch------------------------------HhhhhhhcCCCEEEEEcccccccCCCCcccccchHH--HH
Q 021928 164 RSIICPSEGF------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA--RK 211 (305)
Q Consensus 164 d~Vi~~~~g~------------------------------~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~--~~ 211 (305)
|.+|++++.. +...+++.+..+||++||..+..+......|..++. ..
T Consensus 87 D~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~~~~~~~~~~~y~asKaal~~ 166 (263)
T PRK08339 87 DIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVAIKEPIPNIALSNVVRISMAG 166 (263)
T ss_pred cEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCccccCCCCcchhhHHHHHHHHH
Confidence 9999874310 112234456679999999987765544444543322 22
Q ss_pred HHHHHHHHHHhCCCCEEEEecCCcccCCCC----------C---cce--eeecCCCCCCccCHHHHHHHHHHHhhCCC--
Q 021928 212 LAEQDESMLMASGIPYTIIRTGVLQNTPGG----------K---QGF--QFEEGCAANGSLSKEDAAFICVEALESIP-- 274 (305)
Q Consensus 212 ~~~~aE~~l~~~gi~~tilRPg~l~~~~~~----------~---~~~--~~~~~~~~~~~Is~~DvA~~iv~~l~~~~-- 274 (305)
+.+.....+...|+++..|.||++...... + ... .+...........++|+|.+++.++....
T Consensus 167 l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v~fL~s~~~~~ 246 (263)
T PRK08339 167 LVRTLAKELGPKGITVNGIMPGIIRTDRVIQLAQDRAKREGKSVEEALQEYAKPIPLGRLGEPEEIGYLVAFLASDLGSY 246 (263)
T ss_pred HHHHHHHHhcccCeEEEEEEeCcCccHHHHHHHHhhhhccCCCHHHHHHHHhccCCcccCcCHHHHHHHHHHHhcchhcC
Confidence 223333445568999999999996432100 0 000 00011122345688999999999987543
Q ss_pred CCCcEEEEecCC
Q 021928 275 QTGLIFEVVNGE 286 (305)
Q Consensus 275 ~~~~~~~v~~g~ 286 (305)
..++++.+.+|.
T Consensus 247 itG~~~~vdgG~ 258 (263)
T PRK08339 247 INGAMIPVDGGR 258 (263)
T ss_pred ccCceEEECCCc
Confidence 467888887664
|
|
| >PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=2.6e-14 Score=127.60 Aligned_cols=189 Identities=16% Similarity=0.144 Sum_probs=122.2
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchh-h---h---hcCCCcEEeecCCCCHHHHHHHhc-------Cc
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-M---E---SFGTYVESMAGDASNKKFLKTALR-------GV 163 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~-~---~---~~~~~v~~v~~D~~d~~~~~~~~~-------~~ 163 (305)
+|+|+||||+|+||++++++|+++|++|+++.|+.... . + ..+.++.++.+|++|.+++.++++ .+
T Consensus 2 ~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 81 (256)
T PRK12745 2 RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWGRI 81 (256)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence 57899999999999999999999999999999875321 1 1 123468899999999887766554 57
Q ss_pred cEEEECCcc-------h---------------------Hhhh----hhh-cC-----CCEEEEEcccccccCCCCccccc
Q 021928 164 RSIICPSEG-------F---------------------ISNA----GSL-KG-----VQHVILLSQLSVYRGSGGIQALM 205 (305)
Q Consensus 164 d~Vi~~~~g-------~---------------------~~~~----a~~-~g-----v~~~V~iSS~~~~~~~~~~~~~~ 205 (305)
|+|||+++. . +.++ .++ .+ +++||++||..+..+......|.
T Consensus 82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~ 161 (256)
T PRK12745 82 DCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMVSPNRGEYC 161 (256)
T ss_pred CEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhccCCCCCcccH
Confidence 999998321 0 0011 111 11 57899999988766555555554
Q ss_pred chHHHH--HHHHHHHHHHhCCCCEEEEecCCcccCCCCC--cce--eeecC-CCCCCccCHHHHHHHHHHHhhCCC--CC
Q 021928 206 KGNARK--LAEQDESMLMASGIPYTIIRTGVLQNTPGGK--QGF--QFEEG-CAANGSLSKEDAAFICVEALESIP--QT 276 (305)
Q Consensus 206 ~~~~~~--~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~--~~~--~~~~~-~~~~~~Is~~DvA~~iv~~l~~~~--~~ 276 (305)
..+... +.+.....+...++++++++||.+....... ... .+... .....+.+++|+|+++..++.... ..
T Consensus 162 ~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~i~~l~~~~~~~~~ 241 (256)
T PRK12745 162 ISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTDMTAPVTAKYDALIAKGLVPMPRWGEPEDVARAVAALASGDLPYST 241 (256)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCccccccchhHHhhhhhcCCCcCCCcCHHHHHHHHHHHhCCcccccC
Confidence 433211 1122222344578999999999865432111 000 00010 112346689999999998886432 35
Q ss_pred CcEEEEecCC
Q 021928 277 GLIFEVVNGE 286 (305)
Q Consensus 277 ~~~~~v~~g~ 286 (305)
++.|++.+|.
T Consensus 242 G~~~~i~gg~ 251 (256)
T PRK12745 242 GQAIHVDGGL 251 (256)
T ss_pred CCEEEECCCe
Confidence 7899998764
|
|
| >PRK07577 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=2.2e-14 Score=126.30 Aligned_cols=183 Identities=15% Similarity=0.111 Sum_probs=120.6
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhc------CccEEEECCc
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR------GVRSIICPSE 171 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~------~~d~Vi~~~~ 171 (305)
.|+|+||||+|+||++++++|+++|++|+++.|+.++. . ..+++.+|+.|.+++.++++ ++|+|||+++
T Consensus 3 ~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~~---~--~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~ag 77 (234)
T PRK07577 3 SRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAIDD---F--PGELFACDLADIEQTAATLAQINEIHPVDAIVNNVG 77 (234)
T ss_pred CCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCcccc---c--CceEEEeeCCCHHHHHHHHHHHHHhCCCcEEEECCC
Confidence 48999999999999999999999999999999987542 1 23678999999988877775 5799998733
Q ss_pred ch------------------------------HhhhhhhcCCCEEEEEcccccccCCCCcccccchHH--HHHHHHHHHH
Q 021928 172 GF------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA--RKLAEQDESM 219 (305)
Q Consensus 172 g~------------------------------~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~--~~~~~~aE~~ 219 (305)
.. +...+++.+.++||++||...+.. .....|...+. ..+.+.....
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~-~~~~~Y~~sK~a~~~~~~~~a~e 156 (234)
T PRK07577 78 IALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQGRIVNICSRAIFGA-LDRTSYSAAKSALVGCTRTWALE 156 (234)
T ss_pred CCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccccccCC-CCchHHHHHHHHHHHHHHHHHHH
Confidence 10 112234567789999999876532 23334433221 1111222233
Q ss_pred HHhCCCCEEEEecCCcccCCCCCc-ce------eeecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEEEEecCC
Q 021928 220 LMASGIPYTIIRTGVLQNTPGGKQ-GF------QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVNGE 286 (305)
Q Consensus 220 l~~~gi~~tilRPg~l~~~~~~~~-~~------~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~v~~g~ 286 (305)
+...++.++.++||.+........ .. .............++|+|++++.++..+. ..++.+.+.++.
T Consensus 157 ~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~~g~~ 232 (234)
T PRK07577 157 LAEYGITVNAVAPGPIETELFRQTRPVGSEEEKRVLASIPMRRLGTPEEVAAAIAFLLSDDAGFITGQVLGVDGGG 232 (234)
T ss_pred HHhhCcEEEEEecCcccCcccccccccchhHHHHHhhcCCCCCCcCHHHHHHHHHHHhCcccCCccceEEEecCCc
Confidence 455799999999999654321100 00 00001111224578999999999997654 357888887653
|
|
| >KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.64 E-value=5e-15 Score=131.15 Aligned_cols=199 Identities=16% Similarity=0.105 Sum_probs=135.6
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh----c-CCCcEEeecCCCCHHHHHHHhcCccEEEECC
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES----F-GTYVESMAGDASNKKFLKTALRGVRSIICPS 170 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~----~-~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~ 170 (305)
..+++|+||||.||||+|||+.|...||+|++++---...... + ...++.+.-|+.. +++.++|.|+|.+
T Consensus 25 ~~~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k~n~~~~~~~~~fel~~hdv~~-----pl~~evD~IyhLA 99 (350)
T KOG1429|consen 25 SQNLRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTGRKENLEHWIGHPNFELIRHDVVE-----PLLKEVDQIYHLA 99 (350)
T ss_pred CCCcEEEEecCcchHHHHHHHHHHhcCCeEEEEecccccchhhcchhccCcceeEEEeechh-----HHHHHhhhhhhhc
Confidence 3469999999999999999999999999999987543332111 1 2356666666654 5788899999762
Q ss_pred -c--c-------------------hHhhhhhhcCCCEEEEEcccccccCCCC---c-------ccccchH-HHHHHHHHH
Q 021928 171 -E--G-------------------FISNAGSLKGVQHVILLSQLSVYRGSGG---I-------QALMKGN-ARKLAEQDE 217 (305)
Q Consensus 171 -~--g-------------------~~~~~a~~~gv~~~V~iSS~~~~~~~~~---~-------~~~~~~~-~~~~~~~aE 217 (305)
+ + .+.-.|++.+ +||++.||..+|+.+.. . ++..+.. .-.-|+.+|
T Consensus 100 apasp~~y~~npvktIktN~igtln~lglakrv~-aR~l~aSTseVYgdp~~hpq~e~ywg~vnpigpr~cydegKr~aE 178 (350)
T KOG1429|consen 100 APASPPHYKYNPVKTIKTNVIGTLNMLGLAKRVG-ARFLLASTSEVYGDPLVHPQVETYWGNVNPIGPRSCYDEGKRVAE 178 (350)
T ss_pred cCCCCcccccCccceeeecchhhHHHHHHHHHhC-ceEEEeecccccCCcccCCCccccccccCcCCchhhhhHHHHHHH
Confidence 2 0 1334567777 79999999999974211 0 1111111 112345566
Q ss_pred HHH----HhCCCCEEEEecCCcccCC-----C-----------CCcc-eeeecCCCCCCccCHHHHHHHHHHHhhCCCCC
Q 021928 218 SML----MASGIPYTIIRTGVLQNTP-----G-----------GKQG-FQFEEGCAANGSLSKEDAAFICVEALESIPQT 276 (305)
Q Consensus 218 ~~l----~~~gi~~tilRPg~l~~~~-----~-----------~~~~-~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~~~ 276 (305)
.++ ++.|+.+.|.|+-..++.. + ..++ ..++.|.+...+..++|+.+.++.+++.+...
T Consensus 179 ~L~~~y~k~~giE~rIaRifNtyGPrm~~~dgrvvsnf~~q~lr~epltv~g~G~qtRSF~yvsD~Vegll~Lm~s~~~~ 258 (350)
T KOG1429|consen 179 TLCYAYHKQEGIEVRIARIFNTYGPRMHMDDGRVVSNFIAQALRGEPLTVYGDGKQTRSFQYVSDLVEGLLRLMESDYRG 258 (350)
T ss_pred HHHHHhhcccCcEEEEEeeecccCCccccCCChhhHHHHHHHhcCCCeEEEcCCcceEEEEeHHHHHHHHHHHhcCCCcC
Confidence 554 4689999999975422111 1 1222 33456677789999999999999999876543
Q ss_pred CcEEEEecCC-cCHHHHHHHHHHhhhh
Q 021928 277 GLIFEVVNGE-EKVSDWKKCFSRLMEK 302 (305)
Q Consensus 277 ~~~~~v~~g~-~s~~d~~~~~~~l~~~ 302 (305)
.+||.|++ .++.++++++.++.+.
T Consensus 259 --pvNiGnp~e~Tm~elAemv~~~~~~ 283 (350)
T KOG1429|consen 259 --PVNIGNPGEFTMLELAEMVKELIGP 283 (350)
T ss_pred --CcccCCccceeHHHHHHHHHHHcCC
Confidence 49999965 5999999999998743
|
|
| >PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed | Back alignment and domain information |
|---|
Probab=99.64 E-value=2.7e-14 Score=126.37 Aligned_cols=190 Identities=14% Similarity=0.129 Sum_probs=124.8
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh---hcCCCcEEeecCCCCHHHHHHHh-------cCccEE
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTAL-------RGVRSI 166 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~---~~~~~v~~v~~D~~d~~~~~~~~-------~~~d~V 166 (305)
++++++||||+|+||++++++|+++|+.|++..|+.++..+ ..+.+++++.+|++|.+++.+++ .++|+|
T Consensus 5 ~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 84 (245)
T PRK12936 5 SGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEADLEGVDIL 84 (245)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 45899999999999999999999999999888888765432 23446889999999988887664 458999
Q ss_pred EECCcch--------------------------Hhhh----hhhcCCCEEEEEcccccccCCCCcccccchHH--HHHHH
Q 021928 167 ICPSEGF--------------------------ISNA----GSLKGVQHVILLSQLSVYRGSGGIQALMKGNA--RKLAE 214 (305)
Q Consensus 167 i~~~~g~--------------------------~~~~----a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~--~~~~~ 214 (305)
||+++.. +..+ ..+.+.++||++||.....+......|...+. ..+.+
T Consensus 85 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sk~a~~~~~~ 164 (245)
T PRK12936 85 VNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSVVGVTGNPGQANYCASKAGMIGFSK 164 (245)
T ss_pred EECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCHHhCcCCCCCcchHHHHHHHHHHHH
Confidence 9884310 1111 22245679999999866655444444544332 11222
Q ss_pred HHHHHHHhCCCCEEEEecCCcccCCCCC-ccee---eecCCCCCCccCHHHHHHHHHHHhhCCCC--CCcEEEEecCC
Q 021928 215 QDESMLMASGIPYTIIRTGVLQNTPGGK-QGFQ---FEEGCAANGSLSKEDAAFICVEALESIPQ--TGLIFEVVNGE 286 (305)
Q Consensus 215 ~aE~~l~~~gi~~tilRPg~l~~~~~~~-~~~~---~~~~~~~~~~Is~~DvA~~iv~~l~~~~~--~~~~~~v~~g~ 286 (305)
.....+...+++++.++||++....... .... ...........+.+|+|+++..++..+.. .++.+++.+|.
T Consensus 165 ~la~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~~~~~~~~~G~~~~~~~g~ 242 (245)
T PRK12936 165 SLAQEIATRNVTVNCVAPGFIESAMTGKLNDKQKEAIMGAIPMKRMGTGAEVASAVAYLASSEAAYVTGQTIHVNGGM 242 (245)
T ss_pred HHHHHhhHhCeEEEEEEECcCcCchhcccChHHHHHHhcCCCCCCCcCHHHHHHHHHHHcCccccCcCCCEEEECCCc
Confidence 2223345578999999999864322111 0000 00111123356789999999988865432 58899998774
|
|
| >PRK12935 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.9e-14 Score=127.83 Aligned_cols=190 Identities=14% Similarity=0.093 Sum_probs=123.2
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcC-cchhhhh------cCCCcEEeecCCCCHHHHHHHhcC-------
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKD-KRNAMES------FGTYVESMAGDASNKKFLKTALRG------- 162 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~-~~~~~~~------~~~~v~~v~~D~~d~~~~~~~~~~------- 162 (305)
.+++++||||+|+||++++++|+++|++|+++.+. ++...+. .+.++.++.+|++|.+++.++++.
T Consensus 5 ~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 84 (247)
T PRK12935 5 NGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHFGK 84 (247)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 35899999999999999999999999999876554 3322111 123588899999999888877764
Q ss_pred ccEEEECCcch--------------------------Hhhh----hhhcCCCEEEEEcccccccCCCCcccccchHHHH-
Q 021928 163 VRSIICPSEGF--------------------------ISNA----GSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK- 211 (305)
Q Consensus 163 ~d~Vi~~~~g~--------------------------~~~~----a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~~- 211 (305)
+|+|||+++.. +.++ ..+.+.++||++||..+..+..+...|..++...
T Consensus 85 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~ 164 (247)
T PRK12935 85 VDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISSIIGQAGGFGQTNYSAAKAGML 164 (247)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchhhcCCCCCCcchHHHHHHHH
Confidence 69999884310 1111 1123456999999987765544555555433211
Q ss_pred -HHHHHHHHHHhCCCCEEEEecCCcccCCCCCcc--e--eeecCCCCCCccCHHHHHHHHHHHhhCCC-CCCcEEEEecC
Q 021928 212 -LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQG--F--QFEEGCAANGSLSKEDAAFICVEALESIP-QTGLIFEVVNG 285 (305)
Q Consensus 212 -~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~~~--~--~~~~~~~~~~~Is~~DvA~~iv~~l~~~~-~~~~~~~v~~g 285 (305)
+.+.....+...++++++++||.+......... . ..........+.+++|+|++++.++.... ..++.|++.++
T Consensus 165 ~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~~~~~~~~~~g~~~~i~~g 244 (247)
T PRK12935 165 GFTKSLALELAKTNVTVNAICPGFIDTEMVAEVPEEVRQKIVAKIPKKRFGQADEIAKGVVYLCRDGAYITGQQLNINGG 244 (247)
T ss_pred HHHHHHHHHHHHcCcEEEEEEeCCCcChhhhhccHHHHHHHHHhCCCCCCcCHHHHHHHHHHHcCcccCccCCEEEeCCC
Confidence 111111223346899999999997533211100 0 00011223457899999999999986543 46789999876
Q ss_pred C
Q 021928 286 E 286 (305)
Q Consensus 286 ~ 286 (305)
.
T Consensus 245 ~ 245 (247)
T PRK12935 245 L 245 (247)
T ss_pred c
Confidence 3
|
|
| >PRK07102 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.4e-14 Score=128.69 Aligned_cols=170 Identities=14% Similarity=0.103 Sum_probs=116.3
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh-------cCCCcEEeecCCCCHHHHHHHhcC----ccEE
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------FGTYVESMAGDASNKKFLKTALRG----VRSI 166 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~-------~~~~v~~v~~D~~d~~~~~~~~~~----~d~V 166 (305)
+|+|+||||+|+||++++++|+++|++|++++|++++..+. ...+++++.+|+.|.+++.++++. +|.+
T Consensus 1 ~~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~d~v 80 (243)
T PRK07102 1 MKKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLPALPDIV 80 (243)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhhcCCEE
Confidence 47999999999999999999999999999999997653221 134688999999999888776654 5999
Q ss_pred EECCcch--------------------------H----hhhhhhcCCCEEEEEcccccccCCCCcccccchHH--HHHHH
Q 021928 167 ICPSEGF--------------------------I----SNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA--RKLAE 214 (305)
Q Consensus 167 i~~~~g~--------------------------~----~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~--~~~~~ 214 (305)
|++++.. + ...+.+.+.++||++||.....+......|..++. ..+.+
T Consensus 81 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~ 160 (243)
T PRK07102 81 LIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSVAGDRGRASNYVYGSAKAALTAFLS 160 (243)
T ss_pred EECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEecccccCCCCCCcccHHHHHHHHHHHH
Confidence 9873310 0 11123456789999999876555444444443322 11122
Q ss_pred HHHHHHHhCCCCEEEEecCCcccCCCCCcceeeecCCCCCCccCHHHHHHHHHHHhhCC
Q 021928 215 QDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESI 273 (305)
Q Consensus 215 ~aE~~l~~~gi~~tilRPg~l~~~~~~~~~~~~~~~~~~~~~Is~~DvA~~iv~~l~~~ 273 (305)
.....+...++.++.++||.+........ .-.....++++|+|+.++.+++.+
T Consensus 161 ~l~~el~~~gi~v~~v~pg~v~t~~~~~~------~~~~~~~~~~~~~a~~i~~~~~~~ 213 (243)
T PRK07102 161 GLRNRLFKSGVHVLTVKPGFVRTPMTAGL------KLPGPLTAQPEEVAKDIFRAIEKG 213 (243)
T ss_pred HHHHHhhccCcEEEEEecCcccChhhhcc------CCCccccCCHHHHHHHHHHHHhCC
Confidence 22233456799999999999754322111 011234678999999999999854
|
|
| >PRK07063 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=1.5e-14 Score=129.80 Aligned_cols=190 Identities=12% Similarity=0.047 Sum_probs=125.1
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh--------cCCCcEEeecCCCCHHHHHHHhc-------
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES--------FGTYVESMAGDASNKKFLKTALR------- 161 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~--------~~~~v~~v~~D~~d~~~~~~~~~------- 161 (305)
.+|+++||||+|+||++++++|+++|++|+++.|+++...+. .+.++.++.+|++|.+++..+++
T Consensus 6 ~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 85 (260)
T PRK07063 6 AGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEAFG 85 (260)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 458999999999999999999999999999999987653221 13457889999999888877665
Q ss_pred CccEEEECCcc----h----------------------H----hhhhhhcCCCEEEEEcccccccCCCCcccccchHH--
Q 021928 162 GVRSIICPSEG----F----------------------I----SNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA-- 209 (305)
Q Consensus 162 ~~d~Vi~~~~g----~----------------------~----~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~-- 209 (305)
.+|++|++++. . + ....++.+..+||++||.....+......|...++
T Consensus 86 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaa~ 165 (260)
T PRK07063 86 PLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIVNIASTHAFKIIPGCFPYPVAKHGL 165 (260)
T ss_pred CCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEEEEECChhhccCCCCchHHHHHHHHH
Confidence 57999988431 0 0 01123345579999999877765555445544332
Q ss_pred HHHHHHHHHHHHhCCCCEEEEecCCcccCCCCC------cce----eeecCCCCCCccCHHHHHHHHHHHhhCCC--CCC
Q 021928 210 RKLAEQDESMLMASGIPYTIIRTGVLQNTPGGK------QGF----QFEEGCAANGSLSKEDAAFICVEALESIP--QTG 277 (305)
Q Consensus 210 ~~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~------~~~----~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~ 277 (305)
..+.+.....+...++.++.|+||++....... ... ..........+.+++|+|.+++.++.+.. ..|
T Consensus 166 ~~~~~~la~el~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~va~~~~fl~s~~~~~itG 245 (260)
T PRK07063 166 LGLTRALGIEYAARNVRVNAIAPGYIETQLTEDWWNAQPDPAAARAETLALQPMKRIGRPEEVAMTAVFLASDEAPFINA 245 (260)
T ss_pred HHHHHHHHHHhCccCeEEEEEeeCCccChhhhhhhhccCChHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCccccccCC
Confidence 111222222344578999999999964332110 000 00000111235688999999999997643 467
Q ss_pred cEEEEecCC
Q 021928 278 LIFEVVNGE 286 (305)
Q Consensus 278 ~~~~v~~g~ 286 (305)
+.+.+.+|.
T Consensus 246 ~~i~vdgg~ 254 (260)
T PRK07063 246 TCITIDGGR 254 (260)
T ss_pred cEEEECCCe
Confidence 888887664
|
|
| >PRK07478 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=1.7e-14 Score=128.94 Aligned_cols=189 Identities=16% Similarity=0.119 Sum_probs=124.1
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh------cCCCcEEeecCCCCHHHHHHHhc-------Cc
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GV 163 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~~~v~~v~~D~~d~~~~~~~~~-------~~ 163 (305)
++++++||||+|+||++++++|++.|++|++++|++++..+. .+.++.++.+|+.|.+++.++++ .+
T Consensus 5 ~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 84 (254)
T PRK07478 5 NGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERFGGL 84 (254)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence 458999999999999999999999999999999987653321 23457889999999988877665 57
Q ss_pred cEEEECCcc-----h--------------------------HhhhhhhcCCCEEEEEccccccc-CCCCcccccchHHH-
Q 021928 164 RSIICPSEG-----F--------------------------ISNAGSLKGVQHVILLSQLSVYR-GSGGIQALMKGNAR- 210 (305)
Q Consensus 164 d~Vi~~~~g-----~--------------------------~~~~a~~~gv~~~V~iSS~~~~~-~~~~~~~~~~~~~~- 210 (305)
|++|++++. . +...+++.+..+||++||..++. +......|..++..
T Consensus 85 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~~Y~~sK~a~ 164 (254)
T PRK07478 85 DIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARGGGSLIFTSTFVGHTAGFPGMAAYAASKAGL 164 (254)
T ss_pred CEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEechHhhccCCCCcchhHHHHHHH
Confidence 999987431 0 01123345567899999987653 33344445443321
Q ss_pred -HHHHHHHHHHHhCCCCEEEEecCCcccCCCCC---cce---eeecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEEE
Q 021928 211 -KLAEQDESMLMASGIPYTIIRTGVLQNTPGGK---QGF---QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFE 281 (305)
Q Consensus 211 -~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~---~~~---~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~ 281 (305)
.+.+.....+...++.++.|+||++....... ... ............+++|+|+.++.++.++. ..|+++.
T Consensus 165 ~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~~~ 244 (254)
T PRK07478 165 IGLTQVLAAEYGAQGIRVNALLPGGTDTPMGRAMGDTPEALAFVAGLHALKRMAQPEEIAQAALFLASDAASFVTGTALL 244 (254)
T ss_pred HHHHHHHHHHHhhcCEEEEEEeeCcccCcccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCCCCCeEE
Confidence 11222222344568999999999964332110 000 00000112345689999999999997544 3578888
Q ss_pred EecC
Q 021928 282 VVNG 285 (305)
Q Consensus 282 v~~g 285 (305)
+.+|
T Consensus 245 ~dgg 248 (254)
T PRK07478 245 VDGG 248 (254)
T ss_pred eCCc
Confidence 8765
|
|
| >PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=1.6e-14 Score=129.44 Aligned_cols=190 Identities=14% Similarity=0.149 Sum_probs=125.7
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcch--hhh---hcCCCcEEeecCCCCHHHHHHHhc-------Cc
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN--AME---SFGTYVESMAGDASNKKFLKTALR-------GV 163 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~--~~~---~~~~~v~~v~~D~~d~~~~~~~~~-------~~ 163 (305)
..+++||||||+|+||++++++|++.|++|+++.|+... ..+ ..+.++.++.+|++|.+++.++++ .+
T Consensus 13 l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~i 92 (258)
T PRK06935 13 LDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHGTNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEFGKI 92 (258)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 346999999999999999999999999999999987321 111 123468899999999988877765 57
Q ss_pred cEEEECCcch------------------------------HhhhhhhcCCCEEEEEcccccccCCCCcccccchHHH--H
Q 021928 164 RSIICPSEGF------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--K 211 (305)
Q Consensus 164 d~Vi~~~~g~------------------------------~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~--~ 211 (305)
|++||+++.. ....+++.+.+++|++||..++.+......|...+.. .
T Consensus 93 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~ 172 (258)
T PRK06935 93 DILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIINIASMLSFQGGKFVPAYTASKHGVAG 172 (258)
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEEEECCHHhccCCCCchhhHHHHHHHHH
Confidence 9999874310 0112334556799999999877665554455443321 1
Q ss_pred HHHHHHHHHHhCCCCEEEEecCCcccCCCC----Ccce--eeecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEEEEe
Q 021928 212 LAEQDESMLMASGIPYTIIRTGVLQNTPGG----KQGF--QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVV 283 (305)
Q Consensus 212 ~~~~aE~~l~~~gi~~tilRPg~l~~~~~~----~~~~--~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~v~ 283 (305)
+.+.....+...++.++.|+||++...... .... ..........+..++|+|..+..++.+.. ..|+++.+.
T Consensus 173 ~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~d 252 (258)
T PRK06935 173 LTKAFANELAAYNIQVNAIAPGYIKTANTAPIRADKNRNDEILKRIPAGRWGEPDDLMGAAVFLASRASDYVNGHILAVD 252 (258)
T ss_pred HHHHHHHHhhhhCeEEEEEEeccccccchhhcccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHcChhhcCCCCCEEEEC
Confidence 112222233457899999999996533211 0000 00011122457888999999999987543 367888887
Q ss_pred cC
Q 021928 284 NG 285 (305)
Q Consensus 284 ~g 285 (305)
+|
T Consensus 253 gg 254 (258)
T PRK06935 253 GG 254 (258)
T ss_pred CC
Confidence 66
|
|
| >PRK06124 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=2.5e-14 Score=127.82 Aligned_cols=190 Identities=13% Similarity=0.114 Sum_probs=126.8
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh------hcCCCcEEeecCCCCHHHHHHHhc-------C
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTALR-------G 162 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~------~~~~~v~~v~~D~~d~~~~~~~~~-------~ 162 (305)
..+++|+||||+|+||++++++|+++|++|+++.|+++...+ ..+.++.++.+|++|.+++.++++ .
T Consensus 9 ~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 88 (256)
T PRK06124 9 LAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAEHGR 88 (256)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCC
Confidence 456999999999999999999999999999999998765322 123468899999999888877665 3
Q ss_pred ccEEEECCcc----h----------------------H----hhhhhhcCCCEEEEEcccccccCCCCcccccchHHH--
Q 021928 163 VRSIICPSEG----F----------------------I----SNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR-- 210 (305)
Q Consensus 163 ~d~Vi~~~~g----~----------------------~----~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~-- 210 (305)
+|++|++++. . + .+.+.+.+.++||++||..+..+......|..++..
T Consensus 89 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~ 168 (256)
T PRK06124 89 LDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYGRIIAITSIAGQVARAGDAVYPAAKQGLT 168 (256)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEeechhccCCCCccHhHHHHHHHH
Confidence 5899987331 0 0 122334567899999998776555444445443321
Q ss_pred HHHHHHHHHHHhCCCCEEEEecCCcccCCCCC----cce--eeecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEEEE
Q 021928 211 KLAEQDESMLMASGIPYTIIRTGVLQNTPGGK----QGF--QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEV 282 (305)
Q Consensus 211 ~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~----~~~--~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~v 282 (305)
.+.+.....+...++.++.|+||.+....... ... .+........+++++|++.+++.++.++. ..|+.+.+
T Consensus 169 ~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~G~~i~~ 248 (256)
T PRK06124 169 GLMRALAAEFGPHGITSNAIAPGYFATETNAAMAADPAVGPWLAQRTPLGRWGRPEEIAGAAVFLASPAASYVNGHVLAV 248 (256)
T ss_pred HHHHHHHHHHHHhCcEEEEEEECCccCcchhhhccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCcccCCcCCCEEEE
Confidence 11111222234568999999999865432111 000 01111123457899999999999998654 35788777
Q ss_pred ecC
Q 021928 283 VNG 285 (305)
Q Consensus 283 ~~g 285 (305)
.+|
T Consensus 249 dgg 251 (256)
T PRK06124 249 DGG 251 (256)
T ss_pred CCC
Confidence 765
|
|
| >PRK12824 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=2e-14 Score=127.24 Aligned_cols=189 Identities=17% Similarity=0.093 Sum_probs=126.0
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcch-hh---h---hcCCCcEEeecCCCCHHHHHHHhc-------Cc
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-AM---E---SFGTYVESMAGDASNKKFLKTALR-------GV 163 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~-~~---~---~~~~~v~~v~~D~~d~~~~~~~~~-------~~ 163 (305)
+++++||||+|+||++++++|+++|++|+++.|+... .. . ..+.++.++.+|+.|.+++.++++ .+
T Consensus 2 ~k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~i 81 (245)
T PRK12824 2 KKIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEGPV 81 (245)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 4799999999999999999999999999999998532 11 1 112358899999999888877664 47
Q ss_pred cEEEECCcch------------------------------HhhhhhhcCCCEEEEEcccccccCCCCcccccchHH--HH
Q 021928 164 RSIICPSEGF------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA--RK 211 (305)
Q Consensus 164 d~Vi~~~~g~------------------------------~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~--~~ 211 (305)
|++||+++.. +.+.+++.+.++||++||...+.+......|...+. ..
T Consensus 82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~Y~~sK~a~~~ 161 (245)
T PRK12824 82 DILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQGYGRIINISSVNGLKGQFGQTNYSAAKAGMIG 161 (245)
T ss_pred CEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEECChhhccCCCCChHHHHHHHHHHH
Confidence 9999884310 112234556789999999887765544444544332 11
Q ss_pred HHHHHHHHHHhCCCCEEEEecCCcccCCCCC-ccee---eecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEEEEecC
Q 021928 212 LAEQDESMLMASGIPYTIIRTGVLQNTPGGK-QGFQ---FEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVNG 285 (305)
Q Consensus 212 ~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~-~~~~---~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~v~~g 285 (305)
+.+.....+...++.+++++||++....... .... +........+.+.+|+|+++..++.... ..++.+++.+|
T Consensus 162 ~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~~~~~~g 241 (245)
T PRK12824 162 FTKALASEGARYGITVNCIAPGYIATPMVEQMGPEVLQSIVNQIPMKRLGTPEEIAAAVAFLVSEAAGFITGETISINGG 241 (245)
T ss_pred HHHHHHHHHHHhCeEEEEEEEcccCCcchhhcCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCccccCccCcEEEECCC
Confidence 1122223345678999999999975432211 1000 0111122346688999999998886433 46889999876
Q ss_pred C
Q 021928 286 E 286 (305)
Q Consensus 286 ~ 286 (305)
.
T Consensus 242 ~ 242 (245)
T PRK12824 242 L 242 (245)
T ss_pred e
Confidence 4
|
|
| >PRK08267 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=1e-14 Score=130.72 Aligned_cols=176 Identities=15% Similarity=0.066 Sum_probs=115.6
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh---c-CCCcEEeecCCCCHHHHHHHhc--------CccE
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---F-GTYVESMAGDASNKKFLKTALR--------GVRS 165 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~-~~~v~~v~~D~~d~~~~~~~~~--------~~d~ 165 (305)
||++|||||+|+||++++++|+++|++|++++|++++..+. . +.++.++.+|++|.+++.++++ .+|+
T Consensus 1 mk~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id~ 80 (260)
T PRK08267 1 MKSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATGGRLDV 80 (260)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCCE
Confidence 47899999999999999999999999999999988764322 1 2468999999999888877654 4599
Q ss_pred EEECCcch--------------------------Hhhh----hhhcCCCEEEEEcccccccCCCCcccccchHHH--HHH
Q 021928 166 IICPSEGF--------------------------ISNA----GSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--KLA 213 (305)
Q Consensus 166 Vi~~~~g~--------------------------~~~~----a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~--~~~ 213 (305)
|||+++.. +..+ .+..+..+||++||.....+......|..+++. ...
T Consensus 81 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sKaa~~~~~ 160 (260)
T PRK08267 81 LFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSSASAIYGQPGLAVYSATKFAVRGLT 160 (260)
T ss_pred EEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCchhhCcCCCCchhhHHHHHHHHHHH
Confidence 99884310 1111 233456799999998665554444445433221 111
Q ss_pred HHHHHHHHhCCCCEEEEecCCcccCCCCC--cceeeecCCCCCCccCHHHHHHHHHHHhhCC
Q 021928 214 EQDESMLMASGIPYTIIRTGVLQNTPGGK--QGFQFEEGCAANGSLSKEDAAFICVEALESI 273 (305)
Q Consensus 214 ~~aE~~l~~~gi~~tilRPg~l~~~~~~~--~~~~~~~~~~~~~~Is~~DvA~~iv~~l~~~ 273 (305)
+.....+...+++++.++||++....... ..............++++|+|++++.+++++
T Consensus 161 ~~l~~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~~~~~~ 222 (260)
T PRK08267 161 EALDLEWRRHGIRVADVMPLFVDTAMLDGTSNEVDAGSTKRLGVRLTPEDVAEAVWAAVQHP 222 (260)
T ss_pred HHHHHHhcccCcEEEEEecCCcCCcccccccchhhhhhHhhccCCCCHHHHHHHHHHHHhCC
Confidence 11112234568999999999975432211 0000000011123578899999999999754
|
|
| >PRK08264 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.63 E-value=2.8e-14 Score=126.04 Aligned_cols=167 Identities=16% Similarity=0.192 Sum_probs=117.5
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhc---CccEEEECCcc
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR---GVRSIICPSEG 172 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~---~~d~Vi~~~~g 172 (305)
..++|+||||+|+||++++++|+++|+ +|+++.|++++..+ .+.++.++.+|+.|.+++.++++ .+|+|||+++.
T Consensus 5 ~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag~ 83 (238)
T PRK08264 5 KGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD-LGPRVVPLQLDVTDPASVAAAAEAASDVTILVNNAGI 83 (238)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh-cCCceEEEEecCCCHHHHHHHHHhcCCCCEEEECCCc
Confidence 458999999999999999999999998 99999998766543 44578999999999999888776 47999988432
Q ss_pred -h--------------------------Hhhh----hhhcCCCEEEEEcccccccCCCCcccccchHHHH--HHHHHHHH
Q 021928 173 -F--------------------------ISNA----GSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK--LAEQDESM 219 (305)
Q Consensus 173 -~--------------------------~~~~----a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~~--~~~~aE~~ 219 (305)
. +.++ .+..+.++||++||...+.+......|...+... +.+.....
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~~~~~y~~sK~a~~~~~~~l~~~ 163 (238)
T PRK08264 84 FRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVLSWVNFPNLGTYSASKAAAWSLTQALRAE 163 (238)
T ss_pred CCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhccCCCCchHhHHHHHHHHHHHHHHHHH
Confidence 0 1111 2235678899999987776554444454332211 11111222
Q ss_pred HHhCCCCEEEEecCCcccCCCCCcceeeecCCCCCCccCHHHHHHHHHHHhhCC
Q 021928 220 LMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESI 273 (305)
Q Consensus 220 l~~~gi~~tilRPg~l~~~~~~~~~~~~~~~~~~~~~Is~~DvA~~iv~~l~~~ 273 (305)
+...+++++++|||.+....... .....++.+|+|+.++..+...
T Consensus 164 ~~~~~i~~~~v~pg~v~t~~~~~---------~~~~~~~~~~~a~~~~~~~~~~ 208 (238)
T PRK08264 164 LAPQGTRVLGVHPGPIDTDMAAG---------LDAPKASPADVARQILDALEAG 208 (238)
T ss_pred hhhcCeEEEEEeCCccccccccc---------CCcCCCCHHHHHHHHHHHHhCC
Confidence 34468999999999875432111 0112688999999999999754
|
|
| >PRK05866 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=3.1e-14 Score=130.58 Aligned_cols=172 Identities=15% Similarity=0.114 Sum_probs=115.8
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh------cCCCcEEeecCCCCHHHHHHHhc-------Cc
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GV 163 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~~~v~~v~~D~~d~~~~~~~~~-------~~ 163 (305)
.+++|+||||+|+||++++++|+++|++|++++|+.+...+. .+..+.++.+|+.|.+++.++++ .+
T Consensus 39 ~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~i 118 (293)
T PRK05866 39 TGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRIGGV 118 (293)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 458999999999999999999999999999999997653321 13457789999999988887776 68
Q ss_pred cEEEECCcch--------------------------------HhhhhhhcCCCEEEEEcccccccC-CCCcccccchHHH
Q 021928 164 RSIICPSEGF--------------------------------ISNAGSLKGVQHVILLSQLSVYRG-SGGIQALMKGNAR 210 (305)
Q Consensus 164 d~Vi~~~~g~--------------------------------~~~~a~~~gv~~~V~iSS~~~~~~-~~~~~~~~~~~~~ 210 (305)
|++|++++.. +...+++.+..+||++||.+++.. .+....|...++.
T Consensus 119 d~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~p~~~~Y~asKaa 198 (293)
T PRK05866 119 DILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERGDGHIINVATWGVLSEASPLFSVYNASKAA 198 (293)
T ss_pred CEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCCCCCcchHHHHHHH
Confidence 9999884310 001123456789999999876542 2333344333221
Q ss_pred --HHHHHHHHHHHhCCCCEEEEecCCcccCCCCCcceeeecCCCCCCccCHHHHHHHHHHHhhCC
Q 021928 211 --KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESI 273 (305)
Q Consensus 211 --~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~~~~~~~~~~~~~~~Is~~DvA~~iv~~l~~~ 273 (305)
.+.+.....+...++.++.++||.+........ .. ......++++++|+.++.++++.
T Consensus 199 l~~l~~~la~e~~~~gI~v~~v~pg~v~T~~~~~~-~~----~~~~~~~~pe~vA~~~~~~~~~~ 258 (293)
T PRK05866 199 LSAVSRVIETEWGDRGVHSTTLYYPLVATPMIAPT-KA----YDGLPALTADEAAEWMVTAARTR 258 (293)
T ss_pred HHHHHHHHHHHhcccCcEEEEEEcCcccCcccccc-cc----ccCCCCCCHHHHHHHHHHHHhcC
Confidence 111222233445799999999997643322111 00 01123579999999999999864
|
|
| >PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=4e-14 Score=125.90 Aligned_cols=189 Identities=17% Similarity=0.178 Sum_probs=122.0
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcch-hhh------hcCCCcEEeecCCCCHHHHHHHhc-------C
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-AME------SFGTYVESMAGDASNKKFLKTALR-------G 162 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~-~~~------~~~~~v~~v~~D~~d~~~~~~~~~-------~ 162 (305)
.+++|+||||+|+||++++++|+++|++|++..|+... ... ..+.++.++.+|+++.+++..+++ +
T Consensus 5 ~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 84 (252)
T PRK06077 5 KDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDRYGV 84 (252)
T ss_pred CCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHHcCC
Confidence 35899999999999999999999999999887765322 111 122356788999999887766654 5
Q ss_pred ccEEEECCcc----h----------------------Hhhhhhh--cCCCEEEEEcccccccCCCCcccccchHHHHHHH
Q 021928 163 VRSIICPSEG----F----------------------ISNAGSL--KGVQHVILLSQLSVYRGSGGIQALMKGNARKLAE 214 (305)
Q Consensus 163 ~d~Vi~~~~g----~----------------------~~~~a~~--~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~~~~~ 214 (305)
+|+|||+++. . +.+++.. ...++||++||..++.+..+...|..++.... .
T Consensus 85 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~~~~-~ 163 (252)
T PRK06077 85 ADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAGIRPAYGLSIYGAMKAAVI-N 163 (252)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhccCCCCCchHHHHHHHHHH-H
Confidence 7999998431 0 0111111 12358999999988776555555544332110 1
Q ss_pred HHHHHHHh--CCCCEEEEecCCcccCCCCC--c--cee---e-ecCCCCCCccCHHHHHHHHHHHhhCCCCCCcEEEEec
Q 021928 215 QDESMLMA--SGIPYTIIRTGVLQNTPGGK--Q--GFQ---F-EEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVVN 284 (305)
Q Consensus 215 ~aE~~l~~--~gi~~tilRPg~l~~~~~~~--~--~~~---~-~~~~~~~~~Is~~DvA~~iv~~l~~~~~~~~~~~v~~ 284 (305)
.++.+.++ .++.+.+++||++....... . ... + ........+++++|+|++++.++..+...++.|++.+
T Consensus 164 ~~~~l~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~~~~g~~~~i~~ 243 (252)
T PRK06077 164 LTKYLALELAPKIRVNAIAPGFVKTKLGESLFKVLGMSEKEFAEKFTLMGKILDPEEVAEFVAAILKIESITGQVFVLDS 243 (252)
T ss_pred HHHHHHHHHhcCCEEEEEeeCCccChHHHhhhhcccccHHHHHHhcCcCCCCCCHHHHHHHHHHHhCccccCCCeEEecC
Confidence 11222122 37899999999864332110 0 000 0 0011123579999999999999986666789999998
Q ss_pred CC
Q 021928 285 GE 286 (305)
Q Consensus 285 g~ 286 (305)
|.
T Consensus 244 g~ 245 (252)
T PRK06077 244 GE 245 (252)
T ss_pred Ce
Confidence 75
|
|
| >PRK06181 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=2.9e-14 Score=127.97 Aligned_cols=175 Identities=13% Similarity=0.171 Sum_probs=116.0
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh------cCCCcEEeecCCCCHHHHHHHhc-------Ccc
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GVR 164 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~~~v~~v~~D~~d~~~~~~~~~-------~~d 164 (305)
+++|+||||+|+||++++++|+++|++|++++|++.+..+. .+.++.++.+|+.|.+++..+++ ++|
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 80 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGID 80 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 37899999999999999999999999999999987553211 23468889999999988877765 679
Q ss_pred EEEECCcch---------------------------Hhhhhh---hcCCCEEEEEcccccccCCCCcccccchHHH--HH
Q 021928 165 SIICPSEGF---------------------------ISNAGS---LKGVQHVILLSQLSVYRGSGGIQALMKGNAR--KL 212 (305)
Q Consensus 165 ~Vi~~~~g~---------------------------~~~~a~---~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~--~~ 212 (305)
+|||+++.. +...+. ..+.+++|++||..++.+..+...|...+.. ..
T Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~~~~~~ 160 (263)
T PRK06181 81 ILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASRGQIVVVSSLAGLTGVPTRSGYAASKHALHGF 160 (263)
T ss_pred EEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCEEEEEecccccCCCCCccHHHHHHHHHHHH
Confidence 999884310 011111 1245789999998877665555455433221 11
Q ss_pred HHHHHHHHHhCCCCEEEEecCCcccCCCC----Ccceee-ecCCCCCCccCHHHHHHHHHHHhhC
Q 021928 213 AEQDESMLMASGIPYTIIRTGVLQNTPGG----KQGFQF-EEGCAANGSLSKEDAAFICVEALES 272 (305)
Q Consensus 213 ~~~aE~~l~~~gi~~tilRPg~l~~~~~~----~~~~~~-~~~~~~~~~Is~~DvA~~iv~~l~~ 272 (305)
.+.....+...+++++.++||++...... ..+... ..+.....+++++|+|++++.+++.
T Consensus 161 ~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~~~~~ 225 (263)
T PRK06181 161 FDSLRIELADDGVAVTVVCPGFVATDIRKRALDGDGKPLGKSPMQESKIMSAEECAEAILPAIAR 225 (263)
T ss_pred HHHHHHHhhhcCceEEEEecCccccCcchhhccccccccccccccccCCCCHHHHHHHHHHHhhC
Confidence 11112223457899999999996543211 111111 1111223679999999999999975
|
|
| >PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=3.6e-14 Score=126.97 Aligned_cols=190 Identities=15% Similarity=0.143 Sum_probs=124.4
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchh-h---hhcCCCcEEeecCCCCHHHHHHHhc-------Ccc
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-M---ESFGTYVESMAGDASNKKFLKTALR-------GVR 164 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~-~---~~~~~~v~~v~~D~~d~~~~~~~~~-------~~d 164 (305)
..+|+++||||+++||++++++|+++|++|+++.|+.... . +..+.++.++.+|++|.+++.++++ .+|
T Consensus 6 l~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~iD 85 (251)
T PRK12481 6 LNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVMGHID 85 (251)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHcCCCC
Confidence 3468999999999999999999999999999998865321 1 1234468899999999988877764 579
Q ss_pred EEEECCcch--------------------------Hhh----hhhhcC-CCEEEEEcccccccCCCCcccccchHH--HH
Q 021928 165 SIICPSEGF--------------------------ISN----AGSLKG-VQHVILLSQLSVYRGSGGIQALMKGNA--RK 211 (305)
Q Consensus 165 ~Vi~~~~g~--------------------------~~~----~a~~~g-v~~~V~iSS~~~~~~~~~~~~~~~~~~--~~ 211 (305)
++|++++.. +.. ...+.+ -.+||++||...+.+......|..++. ..
T Consensus 86 ~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~asK~a~~~ 165 (251)
T PRK12481 86 ILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQGGIRVPSYTASKSAVMG 165 (251)
T ss_pred EEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcCCCCCCcchHHHHHHHHH
Confidence 999884310 011 122222 368999999887765555455544332 11
Q ss_pred HHHHHHHHHHhCCCCEEEEecCCcccCCCCC----cce--eeecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEEEEe
Q 021928 212 LAEQDESMLMASGIPYTIIRTGVLQNTPGGK----QGF--QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVV 283 (305)
Q Consensus 212 ~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~----~~~--~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~v~ 283 (305)
+.+.....+...++++..|+||.+....... ... .+........+..++|+|++++.++.... ..|+++.+.
T Consensus 166 l~~~la~e~~~~girvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~peeva~~~~~L~s~~~~~~~G~~i~vd 245 (251)
T PRK12481 166 LTRALATELSQYNINVNAIAPGYMATDNTAALRADTARNEAILERIPASRWGTPDDLAGPAIFLSSSASDYVTGYTLAVD 245 (251)
T ss_pred HHHHHHHHHhhcCeEEEEEecCCCccCchhhcccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCcCCceEEEC
Confidence 1222223345689999999999964332110 000 00001112346789999999999997533 467888877
Q ss_pred cC
Q 021928 284 NG 285 (305)
Q Consensus 284 ~g 285 (305)
+|
T Consensus 246 gg 247 (251)
T PRK12481 246 GG 247 (251)
T ss_pred CC
Confidence 65
|
|
| >PRK07109 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=3.1e-14 Score=133.00 Aligned_cols=185 Identities=12% Similarity=0.065 Sum_probs=121.9
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh------cCCCcEEeecCCCCHHHHHHHhc-------Cc
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GV 163 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~~~v~~v~~D~~d~~~~~~~~~-------~~ 163 (305)
.+++|+||||+|+||++++++|+++|++|+++.|++++..+. .+.++.++.+|++|.++++++++ .+
T Consensus 7 ~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~g~i 86 (334)
T PRK07109 7 GRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEELGPI 86 (334)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHCCCC
Confidence 458999999999999999999999999999999987653321 23467889999999988877654 57
Q ss_pred cEEEECCcch------------------------------HhhhhhhcCCCEEEEEcccccccCCCCcccccchHH--HH
Q 021928 164 RSIICPSEGF------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA--RK 211 (305)
Q Consensus 164 d~Vi~~~~g~------------------------------~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~--~~ 211 (305)
|++|++++.. +...+++.+..+||++||..++.+.+....|..++. ..
T Consensus 87 D~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~asK~a~~~ 166 (334)
T PRK07109 87 DTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALAYRSIPLQSAYCAAKHAIRG 166 (334)
T ss_pred CEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCChhhccCCCcchHHHHHHHHHHH
Confidence 9999884310 112234455679999999988876555555544332 11
Q ss_pred HHHHHHHHHH--hCCCCEEEEecCCcccCCC-CCcceeeecCCCCCCccCHHHHHHHHHHHhhCCCCCCcEEEEec
Q 021928 212 LAEQDESMLM--ASGIPYTIIRTGVLQNTPG-GKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVVN 284 (305)
Q Consensus 212 ~~~~aE~~l~--~~gi~~tilRPg~l~~~~~-~~~~~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~~~~~~~~v~~ 284 (305)
+.+.....+. ..++.+++|+||.+..... ................++++|+|++++.++.++ .+.+.+..
T Consensus 167 ~~~~l~~el~~~~~~I~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~pe~vA~~i~~~~~~~---~~~~~vg~ 239 (334)
T PRK07109 167 FTDSLRCELLHDGSPVSVTMVQPPAVNTPQFDWARSRLPVEPQPVPPIYQPEVVADAILYAAEHP---RRELWVGG 239 (334)
T ss_pred HHHHHHHHHhhcCCCeEEEEEeCCCccCchhhhhhhhccccccCCCCCCCHHHHHHHHHHHHhCC---CcEEEeCc
Confidence 1111112222 2579999999998643211 111000001111234578999999999999876 34555553
|
|
| >PRK07774 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=2.7e-14 Score=127.00 Aligned_cols=187 Identities=17% Similarity=0.140 Sum_probs=120.7
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh---h---cCCCcEEeecCCCCHHHHHHHhc-------Cc
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---S---FGTYVESMAGDASNKKFLKTALR-------GV 163 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~---~---~~~~v~~v~~D~~d~~~~~~~~~-------~~ 163 (305)
.+++++||||+|+||++++++|+++|++|+++.|+++.... . .+.++.++.+|++|.+++..+++ .+
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 84 (250)
T PRK07774 5 DDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAFGGI 84 (250)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence 45899999999999999999999999999999998654221 1 12356789999999988776554 57
Q ss_pred cEEEECCcc-------h----------------------Hhh----hhhhcCCCEEEEEcccccccCCCCcccccchHH-
Q 021928 164 RSIICPSEG-------F----------------------ISN----AGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA- 209 (305)
Q Consensus 164 d~Vi~~~~g-------~----------------------~~~----~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~- 209 (305)
|+|||+++. . +.. ...+.+.++||++||..++.+. ..|..++.
T Consensus 85 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~---~~Y~~sK~a 161 (250)
T PRK07774 85 DYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAAWLYS---NFYGLAKVG 161 (250)
T ss_pred CEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEecccccCCc---cccHHHHHH
Confidence 999998431 0 011 1223346799999998776432 23333222
Q ss_pred -HHHHHHHHHHHHhCCCCEEEEecCCcccCCCCC-cc-ee---eecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEEE
Q 021928 210 -RKLAEQDESMLMASGIPYTIIRTGVLQNTPGGK-QG-FQ---FEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFE 281 (305)
Q Consensus 210 -~~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~-~~-~~---~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~ 281 (305)
..+.+...+.+...++.+++++||.+....... .. .. ...........+++|+|++++.++..+. ..+++|+
T Consensus 162 ~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~~~~~~~g~~~~ 241 (250)
T PRK07774 162 LNGLTQQLARELGGMNIRVNAIAPGPIDTEATRTVTPKEFVADMVKGIPLSRMGTPEDLVGMCLFLLSDEASWITGQIFN 241 (250)
T ss_pred HHHHHHHHHHHhCccCeEEEEEecCcccCccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhChhhhCcCCCEEE
Confidence 111111112233468999999999864332211 00 00 0011112235688999999999987643 3678999
Q ss_pred EecCC
Q 021928 282 VVNGE 286 (305)
Q Consensus 282 v~~g~ 286 (305)
+.+|.
T Consensus 242 v~~g~ 246 (250)
T PRK07774 242 VDGGQ 246 (250)
T ss_pred ECCCe
Confidence 98774
|
|
| >PRK08265 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=2.9e-14 Score=128.29 Aligned_cols=189 Identities=17% Similarity=0.167 Sum_probs=124.1
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh---hcCCCcEEeecCCCCHHHHHHHhc-------CccEE
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALR-------GVRSI 166 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~---~~~~~v~~v~~D~~d~~~~~~~~~-------~~d~V 166 (305)
.+++++||||+|+||++++++|+++|++|++++|++++..+ ..+.++.++.+|++|.+++.++++ .+|++
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~l 84 (261)
T PRK08265 5 AGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLGERARFIATDITDDAAIERAVATVVARFGRVDIL 84 (261)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeeEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 35899999999999999999999999999999998765322 234568899999999988877665 46999
Q ss_pred EECCcch-------------------------H----hhhhhhcCCCEEEEEcccccccCCCCcccccchHHH--HHHHH
Q 021928 167 ICPSEGF-------------------------I----SNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--KLAEQ 215 (305)
Q Consensus 167 i~~~~g~-------------------------~----~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~--~~~~~ 215 (305)
|++++.. + ...++ .+-.+||++||.....+......|...+.. .+.+.
T Consensus 85 v~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~g~ii~isS~~~~~~~~~~~~Y~asKaa~~~~~~~ 163 (261)
T PRK08265 85 VNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLA-RGGGAIVNFTSISAKFAQTGRWLYPASKAAIRQLTRS 163 (261)
T ss_pred EECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHh-cCCcEEEEECchhhccCCCCCchhHHHHHHHHHHHHH
Confidence 9874310 0 01122 334689999998776655555555443321 11122
Q ss_pred HHHHHHhCCCCEEEEecCCcccCCC----CCcce---eeec-CCCCCCccCHHHHHHHHHHHhhCCC--CCCcEEEEecC
Q 021928 216 DESMLMASGIPYTIIRTGVLQNTPG----GKQGF---QFEE-GCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVNG 285 (305)
Q Consensus 216 aE~~l~~~gi~~tilRPg~l~~~~~----~~~~~---~~~~-~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~v~~g 285 (305)
....+...+++++.|+||++..... ..... .+.. ........+++|+|++++.++..+. ..++.+.+.+|
T Consensus 164 la~e~~~~gi~vn~v~PG~~~t~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~~~~l~s~~~~~~tG~~i~vdgg 243 (261)
T PRK08265 164 MAMDLAPDGIRVNSVSPGWTWSRVMDELSGGDRAKADRVAAPFHLLGRVGDPEEVAQVVAFLCSDAASFVTGADYAVDGG 243 (261)
T ss_pred HHHHhcccCEEEEEEccCCccChhhhhhcccchhHHHHhhcccCCCCCccCHHHHHHHHHHHcCccccCccCcEEEECCC
Confidence 2223345789999999998543211 00000 0000 0112335678999999999997543 46788888776
Q ss_pred C
Q 021928 286 E 286 (305)
Q Consensus 286 ~ 286 (305)
.
T Consensus 244 ~ 244 (261)
T PRK08265 244 Y 244 (261)
T ss_pred e
Confidence 3
|
|
| >PRK08085 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=3.7e-14 Score=126.70 Aligned_cols=190 Identities=14% Similarity=0.084 Sum_probs=124.7
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh------cCCCcEEeecCCCCHHHHHHHhc-------Cc
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GV 163 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~~~v~~v~~D~~d~~~~~~~~~-------~~ 163 (305)
.++++|||||+|+||++++++|+++|++|+++.|++++..+. .+.++.++.+|++|.+++.++++ .+
T Consensus 8 ~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 87 (254)
T PRK08085 8 AGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIGPI 87 (254)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhcCCC
Confidence 458999999999999999999999999999999987653221 12357788999999988877664 47
Q ss_pred cEEEECCcch--------------------------Hhh----hhhhcCCCEEEEEcccccccCCCCcccccchHH--HH
Q 021928 164 RSIICPSEGF--------------------------ISN----AGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA--RK 211 (305)
Q Consensus 164 d~Vi~~~~g~--------------------------~~~----~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~--~~ 211 (305)
|+|||+++.. +.. .....+..+||++||.....+......|...+. ..
T Consensus 88 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~ 167 (254)
T PRK08085 88 DVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQSELGRDTITPYAASKGAVKM 167 (254)
T ss_pred CEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccchhccCCCCCcchHHHHHHHHH
Confidence 9999884310 011 122345679999999876655444445544332 11
Q ss_pred HHHHHHHHHHhCCCCEEEEecCCcccCCCCC----cce--eeecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEEEEe
Q 021928 212 LAEQDESMLMASGIPYTIIRTGVLQNTPGGK----QGF--QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVV 283 (305)
Q Consensus 212 ~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~----~~~--~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~v~ 283 (305)
+.+.....+...+++++.|+||++....... ... .+........+.+.+|||.++..++.... -.++.+.+.
T Consensus 168 ~~~~la~e~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~~~~~l~~~~~~~i~G~~i~~d 247 (254)
T PRK08085 168 LTRGMCVELARHNIQVNGIAPGYFKTEMTKALVEDEAFTAWLCKRTPAARWGDPQELIGAAVFLSSKASDFVNGHLLFVD 247 (254)
T ss_pred HHHHHHHHHHhhCeEEEEEEeCCCCCcchhhhccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCcCCEEEEC
Confidence 1122223344579999999999965432111 000 00011122446688999999999997533 367888777
Q ss_pred cCC
Q 021928 284 NGE 286 (305)
Q Consensus 284 ~g~ 286 (305)
+|.
T Consensus 248 gg~ 250 (254)
T PRK08085 248 GGM 250 (254)
T ss_pred CCe
Confidence 664
|
|
| >PRK06114 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=4.5e-14 Score=126.37 Aligned_cols=191 Identities=17% Similarity=0.137 Sum_probs=122.2
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchh-h---h---hcCCCcEEeecCCCCHHHHHHHhc-------
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-M---E---SFGTYVESMAGDASNKKFLKTALR------- 161 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~-~---~---~~~~~v~~v~~D~~d~~~~~~~~~------- 161 (305)
...++++||||+|+||++++++|+++|++|+++.|+.+.. . + ..+.++.++.+|++|.+++.++++
T Consensus 6 ~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g 85 (254)
T PRK06114 6 LDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAELG 85 (254)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 3458999999999999999999999999999999875431 1 1 123467889999999888776665
Q ss_pred CccEEEECCcch------------------------------HhhhhhhcCCCEEEEEcccccccCCCC--cccccchHH
Q 021928 162 GVRSIICPSEGF------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGG--IQALMKGNA 209 (305)
Q Consensus 162 ~~d~Vi~~~~g~------------------------------~~~~a~~~gv~~~V~iSS~~~~~~~~~--~~~~~~~~~ 209 (305)
.+|++|++++.. +...+++.+.++||++||.....+... ...|...++
T Consensus 86 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~Y~~sKa 165 (254)
T PRK06114 86 ALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGGSIVNIASMSGIIVNRGLLQAHYNASKA 165 (254)
T ss_pred CCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCCCCcchHHHHHH
Confidence 369999884310 011123345679999999876543322 233433222
Q ss_pred --HHHHHHHHHHHHhCCCCEEEEecCCcccCCCCCcce-----eeecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEE
Q 021928 210 --RKLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGF-----QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIF 280 (305)
Q Consensus 210 --~~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~~~~-----~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~ 280 (305)
..+.+.....+...++++++|+||++.......... .+........+..++|+|..++.++.+.. -.|+++
T Consensus 166 a~~~l~~~la~e~~~~gi~v~~v~PG~i~t~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~~~~l~s~~~~~~tG~~i 245 (254)
T PRK06114 166 GVIHLSKSLAMEWVGRGIRVNSISPGYTATPMNTRPEMVHQTKLFEEQTPMQRMAKVDEMVGPAVFLLSDAASFCTGVDL 245 (254)
T ss_pred HHHHHHHHHHHHHhhcCeEEEEEeecCccCcccccccchHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCcCCceE
Confidence 111122222344579999999999864332111000 00011122345678999999999987543 367888
Q ss_pred EEecCC
Q 021928 281 EVVNGE 286 (305)
Q Consensus 281 ~v~~g~ 286 (305)
.+.+|.
T Consensus 246 ~~dgg~ 251 (254)
T PRK06114 246 LVDGGF 251 (254)
T ss_pred EECcCE
Confidence 887664
|
|
| >PRK06128 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=5.5e-14 Score=129.19 Aligned_cols=190 Identities=15% Similarity=0.169 Sum_probs=124.4
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcch--hh------hhcCCCcEEeecCCCCHHHHHHHhc-------
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN--AM------ESFGTYVESMAGDASNKKFLKTALR------- 161 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~--~~------~~~~~~v~~v~~D~~d~~~~~~~~~------- 161 (305)
.+|+||||||+|+||++++++|+++|++|++..|+.+. .. +..+.++.++.+|++|.+++.++++
T Consensus 54 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 133 (300)
T PRK06128 54 QGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKELG 133 (300)
T ss_pred CCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHHhC
Confidence 45899999999999999999999999999988775432 11 1123467889999999888776654
Q ss_pred CccEEEECCcc-----h----------------------Hhhhhhh--cCCCEEEEEcccccccCCCCcccccchHH--H
Q 021928 162 GVRSIICPSEG-----F----------------------ISNAGSL--KGVQHVILLSQLSVYRGSGGIQALMKGNA--R 210 (305)
Q Consensus 162 ~~d~Vi~~~~g-----~----------------------~~~~a~~--~gv~~~V~iSS~~~~~~~~~~~~~~~~~~--~ 210 (305)
++|++||+++. . +..++.. ..-.+||++||..++.+......|..++. .
T Consensus 134 ~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~asK~a~~ 213 (300)
T PRK06128 134 GLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQSYQPSPTLLDYASTKAAIV 213 (300)
T ss_pred CCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCccccCCCCCchhHHHHHHHHH
Confidence 57999988431 0 1111211 12258999999988876655555544332 1
Q ss_pred HHHHHHHHHHHhCCCCEEEEecCCcccCCCCC----cce--eeecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEEEE
Q 021928 211 KLAEQDESMLMASGIPYTIIRTGVLQNTPGGK----QGF--QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEV 282 (305)
Q Consensus 211 ~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~----~~~--~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~v 282 (305)
.+.+.....+...++.++.|+||++....... ... .+............+|+|.+++.++.+.. ..+++|++
T Consensus 214 ~~~~~la~el~~~gI~v~~v~PG~i~t~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~~~~l~s~~~~~~~G~~~~v 293 (300)
T PRK06128 214 AFTKALAKQVAEKGIRVNAVAPGPVWTPLQPSGGQPPEKIPDFGSETPMKRPGQPVEMAPLYVLLASQESSYVTGEVFGV 293 (300)
T ss_pred HHHHHHHHHhhhcCcEEEEEEECcCcCCCcccCCCCHHHHHHHhcCCCCCCCcCHHHHHHHHHHHhCccccCccCcEEee
Confidence 12222223345579999999999964332110 000 01111222345688999999999987544 35889999
Q ss_pred ecCC
Q 021928 283 VNGE 286 (305)
Q Consensus 283 ~~g~ 286 (305)
.+|.
T Consensus 294 ~gg~ 297 (300)
T PRK06128 294 TGGL 297 (300)
T ss_pred CCCE
Confidence 8774
|
|
| >PRK08251 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=4.6e-14 Score=125.47 Aligned_cols=169 Identities=20% Similarity=0.237 Sum_probs=113.4
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh-------c-CCCcEEeecCCCCHHHHHHHhc-------C
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------F-GTYVESMAGDASNKKFLKTALR-------G 162 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~-------~-~~~v~~v~~D~~d~~~~~~~~~-------~ 162 (305)
+++++||||+|+||++++++|+++|++|++++|++++..+. . +..+.++.+|++|.+++.++++ +
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 81 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGG 81 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 57999999999999999999999999999999987653221 1 2367889999999887766554 6
Q ss_pred ccEEEECCc----ch--------------------------HhhhhhhcCCCEEEEEcccccccCCCC-cccccchHHHH
Q 021928 163 VRSIICPSE----GF--------------------------ISNAGSLKGVQHVILLSQLSVYRGSGG-IQALMKGNARK 211 (305)
Q Consensus 163 ~d~Vi~~~~----g~--------------------------~~~~a~~~gv~~~V~iSS~~~~~~~~~-~~~~~~~~~~~ 211 (305)
+|++|++++ .. ..+..++.+.++||++||.....+... ...|..++..-
T Consensus 82 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~Y~~sK~a~ 161 (248)
T PRK08251 82 LDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQGSGHLVLISSVSAVRGLPGVKAAYAASKAGV 161 (248)
T ss_pred CCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeccccccCCCCCcccHHHHHHHH
Confidence 799998743 00 011224457789999999876544332 33444333211
Q ss_pred --HHHHHHHHHHhCCCCEEEEecCCcccCCCCCcceeeecCCCCCCccCHHHHHHHHHHHhhCC
Q 021928 212 --LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESI 273 (305)
Q Consensus 212 --~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~~~~~~~~~~~~~~~Is~~DvA~~iv~~l~~~ 273 (305)
+.+.....+...++.++.++||++......... .....++.+|+|+.++.+++..
T Consensus 162 ~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~-------~~~~~~~~~~~a~~i~~~~~~~ 218 (248)
T PRK08251 162 ASLGEGLRAELAKTPIKVSTIEPGYIRSEMNAKAK-------STPFMVDTETGVKALVKAIEKE 218 (248)
T ss_pred HHHHHHHHHHhcccCcEEEEEecCcCcchhhhccc-------cCCccCCHHHHHHHHHHHHhcC
Confidence 111111223346899999999997543321110 1123588999999999999753
|
|
| >PRK07890 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=2.3e-14 Score=128.03 Aligned_cols=190 Identities=12% Similarity=0.154 Sum_probs=121.7
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh------cCCCcEEeecCCCCHHHHHHHhc-------Cc
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GV 163 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~~~v~~v~~D~~d~~~~~~~~~-------~~ 163 (305)
.+++|+||||+|+||++++++|+++|++|+++.|+++...+. .+.++.++.+|++|.+++..+++ .+
T Consensus 4 ~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~ 83 (258)
T PRK07890 4 KGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERFGRV 83 (258)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcCCc
Confidence 358999999999999999999999999999999987653221 13467899999999888876664 57
Q ss_pred cEEEECCcch---------------------------Hhhhhhh---cCCCEEEEEcccccccCCCCcccccchHHHH--
Q 021928 164 RSIICPSEGF---------------------------ISNAGSL---KGVQHVILLSQLSVYRGSGGIQALMKGNARK-- 211 (305)
Q Consensus 164 d~Vi~~~~g~---------------------------~~~~a~~---~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~~-- 211 (305)
|+|||+++.. +.+++.. ...++||++||.....+..+...|...+...
T Consensus 84 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~sK~a~~~ 163 (258)
T PRK07890 84 DALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESGGSIVMINSMVLRHSQPKYGAYKMAKGALLA 163 (258)
T ss_pred cEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCEEEEEechhhccCCCCcchhHHHHHHHHH
Confidence 9999884310 1111111 1225899999988776555544554433211
Q ss_pred HHHHHHHHHHhCCCCEEEEecCCcccCCCC--------Cccee----e---ecCCCCCCccCHHHHHHHHHHHhhCC--C
Q 021928 212 LAEQDESMLMASGIPYTIIRTGVLQNTPGG--------KQGFQ----F---EEGCAANGSLSKEDAAFICVEALESI--P 274 (305)
Q Consensus 212 ~~~~aE~~l~~~gi~~tilRPg~l~~~~~~--------~~~~~----~---~~~~~~~~~Is~~DvA~~iv~~l~~~--~ 274 (305)
+.+.....+...+++++.++||.+...... ..... . ........+.+++|+|.+++.++... .
T Consensus 164 l~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~~~l~~~~~~~ 243 (258)
T PRK07890 164 ASQSLATELGPQGIRVNSVAPGYIWGDPLKGYFRHQAGKYGVTVEQIYAETAANSDLKRLPTDDEVASAVLFLASDLARA 243 (258)
T ss_pred HHHHHHHHHhhcCcEEEEEeCCccCcHHHHHHhhhcccccCCCHHHHHHHHhhcCCccccCCHHHHHHHHHHHcCHhhhC
Confidence 111112223446899999999986432110 00000 0 01112234678899999999988743 2
Q ss_pred CCCcEEEEecCC
Q 021928 275 QTGLIFEVVNGE 286 (305)
Q Consensus 275 ~~~~~~~v~~g~ 286 (305)
..++++.+.+|.
T Consensus 244 ~~G~~i~~~gg~ 255 (258)
T PRK07890 244 ITGQTLDVNCGE 255 (258)
T ss_pred ccCcEEEeCCcc
Confidence 457777776653
|
|
| >PRK06523 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=4.1e-14 Score=126.80 Aligned_cols=187 Identities=16% Similarity=0.187 Sum_probs=123.2
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHh-------cCccEEEEC
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTAL-------RGVRSIICP 169 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~-------~~~d~Vi~~ 169 (305)
.+++|+||||+|+||++++++|+++|++|+++.|++... ....+.++.+|+.|.+++.+++ ..+|+||++
T Consensus 8 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ 84 (260)
T PRK06523 8 AGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDD---LPEGVEFVAADLTTAEGCAAVARAVLERLGGVDILVHV 84 (260)
T ss_pred CCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhh---cCCceeEEecCCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 458999999999999999999999999999999986542 2346889999999988776544 457999987
Q ss_pred Ccch--------------------------------HhhhhhhcCCCEEEEEcccccccCCC-CcccccchHH--HHHHH
Q 021928 170 SEGF--------------------------------ISNAGSLKGVQHVILLSQLSVYRGSG-GIQALMKGNA--RKLAE 214 (305)
Q Consensus 170 ~~g~--------------------------------~~~~a~~~gv~~~V~iSS~~~~~~~~-~~~~~~~~~~--~~~~~ 214 (305)
++.. +...+++.+..+||++||...+.+.. ....|...+. ..+.+
T Consensus 85 ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~~Y~~sK~a~~~l~~ 164 (260)
T PRK06523 85 LGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARGSGVIIHVTSIQRRLPLPESTTAYAAAKAALSTYSK 164 (260)
T ss_pred CcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEecccccCCCCCCcchhHHHHHHHHHHHH
Confidence 4310 01112344567899999987765522 3444443322 11112
Q ss_pred HHHHHHHhCCCCEEEEecCCcccCCCCC------cc--eeee----------cCCCCCCccCHHHHHHHHHHHhhCCC--
Q 021928 215 QDESMLMASGIPYTIIRTGVLQNTPGGK------QG--FQFE----------EGCAANGSLSKEDAAFICVEALESIP-- 274 (305)
Q Consensus 215 ~aE~~l~~~gi~~tilRPg~l~~~~~~~------~~--~~~~----------~~~~~~~~Is~~DvA~~iv~~l~~~~-- 274 (305)
.....+...++.+++|+||++....... +. ..+. ..........++|+|++++.++.+..
T Consensus 165 ~~a~~~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~~~~~l~s~~~~~ 244 (260)
T PRK06523 165 SLSKEVAPKGVRVNTVSPGWIETEAAVALAERLAEAAGTDYEGAKQIIMDSLGGIPLGRPAEPEEVAELIAFLASDRAAS 244 (260)
T ss_pred HHHHHHhhcCcEEEEEecCcccCccHHHHHHHHHhhcCCCHHHHHHHHHHHhccCccCCCCCHHHHHHHHHHHhCccccc
Confidence 2223344578999999999965332100 00 0000 00112235678999999999997543
Q ss_pred CCCcEEEEecCC
Q 021928 275 QTGLIFEVVNGE 286 (305)
Q Consensus 275 ~~~~~~~v~~g~ 286 (305)
..++.+.+.+|.
T Consensus 245 ~~G~~~~vdgg~ 256 (260)
T PRK06523 245 ITGTEYVIDGGT 256 (260)
T ss_pred ccCceEEecCCc
Confidence 467889888775
|
|
| >PRK06398 aldose dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.61 E-value=5.4e-14 Score=126.34 Aligned_cols=184 Identities=14% Similarity=0.113 Sum_probs=121.6
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhc-------CccEEEEC
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR-------GVRSIICP 169 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~-------~~d~Vi~~ 169 (305)
.+++++||||+|+||++++++|+++|++|+++.|+.... ..+.++.+|++|.+++.++++ .+|++||+
T Consensus 5 ~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~-----~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~li~~ 79 (258)
T PRK06398 5 KDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSY-----NDVDYFKVDVSNKEQVIKGIDYVISKYGRIDILVNN 79 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCcccc-----CceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 458999999999999999999999999999999986432 257899999999888877664 57999987
Q ss_pred Ccc----h----------------------Hh----hhhhhcCCCEEEEEcccccccCCCCcccccchHHHH--HHHHHH
Q 021928 170 SEG----F----------------------IS----NAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK--LAEQDE 217 (305)
Q Consensus 170 ~~g----~----------------------~~----~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~~--~~~~aE 217 (305)
++. . +. ...++.+..+||++||..++.+......|...++.- +.+...
T Consensus 80 Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaal~~~~~~la 159 (258)
T PRK06398 80 AGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIASVQSFAVTRNAAAYVTSKHAVLGLTRSIA 159 (258)
T ss_pred CCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCcchhccCCCCCchhhhhHHHHHHHHHHHH
Confidence 431 0 11 112334567999999998876655555565443211 111111
Q ss_pred HHHHhCCCCEEEEecCCcccCCC-C-------Cccee-------eecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEE
Q 021928 218 SMLMASGIPYTIIRTGVLQNTPG-G-------KQGFQ-------FEEGCAANGSLSKEDAAFICVEALESIP--QTGLIF 280 (305)
Q Consensus 218 ~~l~~~gi~~tilRPg~l~~~~~-~-------~~~~~-------~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~ 280 (305)
..+. ..+.++.|+||++..... . ..... +...........++|+|++++.++.... ..++.+
T Consensus 160 ~e~~-~~i~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~eva~~~~~l~s~~~~~~~G~~i 238 (258)
T PRK06398 160 VDYA-PTIRCVAVCPGSIRTPLLEWAAELEVGKDPEHVERKIREWGEMHPMKRVGKPEEVAYVVAFLASDLASFITGECV 238 (258)
T ss_pred HHhC-CCCEEEEEecCCccchHHhhhhhccccCChhhhHHHHHhhhhcCCcCCCcCHHHHHHHHHHHcCcccCCCCCcEE
Confidence 1122 249999999998643211 0 00000 0001112334588999999999987543 467888
Q ss_pred EEecCC
Q 021928 281 EVVNGE 286 (305)
Q Consensus 281 ~v~~g~ 286 (305)
.+.+|.
T Consensus 239 ~~dgg~ 244 (258)
T PRK06398 239 TVDGGL 244 (258)
T ss_pred EECCcc
Confidence 888764
|
|
| >PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=7.5e-14 Score=124.91 Aligned_cols=191 Identities=15% Similarity=0.123 Sum_probs=123.1
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhc-CCCcEEeecCCCCHHHHHHHhc-------CccEEEE
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF-GTYVESMAGDASNKKFLKTALR-------GVRSIIC 168 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-~~~v~~v~~D~~d~~~~~~~~~-------~~d~Vi~ 168 (305)
.+|+++||||+|+||++++++|+++|++|+++.|+.+...+.+ ..++.++.+|++|.+++.++++ .+|++|+
T Consensus 6 ~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~ 85 (255)
T PRK06463 6 KGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELREKGVFTIKCDVGNRDQVKKSKEVVEKEFGRVDVLVN 85 (255)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhCCCeEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 3589999999999999999999999999998877654322222 2257899999999988877765 5799998
Q ss_pred CCcch------------------------------HhhhhhhcCCCEEEEEcccccccC-CCCcccccchHHH--HHHHH
Q 021928 169 PSEGF------------------------------ISNAGSLKGVQHVILLSQLSVYRG-SGGIQALMKGNAR--KLAEQ 215 (305)
Q Consensus 169 ~~~g~------------------------------~~~~a~~~gv~~~V~iSS~~~~~~-~~~~~~~~~~~~~--~~~~~ 215 (305)
+++.. +....++.+..+||++||..++.. ..+...|..+++. .+.+.
T Consensus 86 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~asKaa~~~~~~~ 165 (255)
T PRK06463 86 NAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSKNGAIVNIASNAGIGTAAEGTTFYAITKAGIIILTRR 165 (255)
T ss_pred CCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHhCCCCCCCccHhHHHHHHHHHHHHH
Confidence 74310 111233345679999999877643 2233334433221 11122
Q ss_pred HHHHHHhCCCCEEEEecCCcccCCCC---Ccce------eeecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEEEEec
Q 021928 216 DESMLMASGIPYTIIRTGVLQNTPGG---KQGF------QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVN 284 (305)
Q Consensus 216 aE~~l~~~gi~~tilRPg~l~~~~~~---~~~~------~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~v~~ 284 (305)
....+...+++++.++||++...... .... .+........+.+++|+|++++.++..+. ..|+.+.+.+
T Consensus 166 la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~~~~dg 245 (255)
T PRK06463 166 LAFELGKYGIRVNAVAPGWVETDMTLSGKSQEEAEKLRELFRNKTVLKTTGKPEDIANIVLFLASDDARYITGQVIVADG 245 (255)
T ss_pred HHHHhhhcCeEEEEEeeCCCCCchhhcccCccchHHHHHHHHhCCCcCCCcCHHHHHHHHHHHcChhhcCCCCCEEEECC
Confidence 22233457899999999996433210 0000 00011122345689999999999997544 3678888887
Q ss_pred CCc
Q 021928 285 GEE 287 (305)
Q Consensus 285 g~~ 287 (305)
|..
T Consensus 246 g~~ 248 (255)
T PRK06463 246 GRI 248 (255)
T ss_pred Cee
Confidence 753
|
|
| >PRK07097 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=6e-14 Score=126.34 Aligned_cols=192 Identities=14% Similarity=0.077 Sum_probs=127.2
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh------cCCCcEEeecCCCCHHHHHHHhc-------
Q 021928 95 PEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR------- 161 (305)
Q Consensus 95 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~~~v~~v~~D~~d~~~~~~~~~------- 161 (305)
+..+++++||||+|+||++++++|+++|++|+++.|++++..+. .+.++.++.+|++|.+++.+++.
T Consensus 7 ~~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 86 (265)
T PRK07097 7 SLKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEVG 86 (265)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence 33568999999999999999999999999999999987653221 23468899999999988877764
Q ss_pred CccEEEECCcch------------------------------HhhhhhhcCCCEEEEEcccccccCCCCcccccchHHH-
Q 021928 162 GVRSIICPSEGF------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR- 210 (305)
Q Consensus 162 ~~d~Vi~~~~g~------------------------------~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~- 210 (305)
.+|++||+++.. +...+++.+..+||++||.....+......|...+..
T Consensus 87 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaal 166 (265)
T PRK07097 87 VIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSELGRETVSAYAAAKGGL 166 (265)
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCcEEEEEcCccccCCCCCCccHHHHHHHH
Confidence 479999884310 1112334567799999998665544444455443321
Q ss_pred -HHHHHHHHHHHhCCCCEEEEecCCcccCCCCC--------cceee----ecCCCCCCccCHHHHHHHHHHHhhCCC--C
Q 021928 211 -KLAEQDESMLMASGIPYTIIRTGVLQNTPGGK--------QGFQF----EEGCAANGSLSKEDAAFICVEALESIP--Q 275 (305)
Q Consensus 211 -~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~--------~~~~~----~~~~~~~~~Is~~DvA~~iv~~l~~~~--~ 275 (305)
.+.+.....+...++.++.|+||.+....... ....+ ........+...+|+|..++.++.... .
T Consensus 167 ~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~ 246 (265)
T PRK07097 167 KMLTKNIASEYGEANIQCNGIGPGYIATPQTAPLRELQADGSRHPFDQFIIAKTPAARWGDPEDLAGPAVFLASDASNFV 246 (265)
T ss_pred HHHHHHHHHHhhhcCceEEEEEeccccccchhhhhhccccccchhHHHHHHhcCCccCCcCHHHHHHHHHHHhCcccCCC
Confidence 12222223345579999999999964332100 00000 001112346678999999999997633 4
Q ss_pred CCcEEEEecCC
Q 021928 276 TGLIFEVVNGE 286 (305)
Q Consensus 276 ~~~~~~v~~g~ 286 (305)
.++.+.+.+|.
T Consensus 247 ~g~~~~~~gg~ 257 (265)
T PRK07097 247 NGHILYVDGGI 257 (265)
T ss_pred CCCEEEECCCc
Confidence 67888888764
|
|
| >PLN02778 3,5-epimerase/4-reductase | Back alignment and domain information |
|---|
Probab=99.60 E-value=1.2e-13 Score=127.13 Aligned_cols=185 Identities=10% Similarity=0.063 Sum_probs=117.2
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhc--CccEEEECCc--
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--GVRSIICPSE-- 171 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~--~~d~Vi~~~~-- 171 (305)
.+.|+||||||+||||++++++|+++|++|+... .|+.|.+.+...++ ++|+|||+++
T Consensus 7 ~~~~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~------------------~~~~~~~~v~~~l~~~~~D~ViH~Aa~~ 68 (298)
T PLN02778 7 SATLKFLIYGKTGWIGGLLGKLCQEQGIDFHYGS------------------GRLENRASLEADIDAVKPTHVFNAAGVT 68 (298)
T ss_pred CCCCeEEEECCCCHHHHHHHHHHHhCCCEEEEec------------------CccCCHHHHHHHHHhcCCCEEEECCccc
Confidence 3458999999999999999999999999987432 34455566666665 6799998832
Q ss_pred ---c---h-----------------HhhhhhhcCCCEEEEEcccccccCCC------C--cc----cccc-hHHHHHHHH
Q 021928 172 ---G---F-----------------ISNAGSLKGVQHVILLSQLSVYRGSG------G--IQ----ALMK-GNARKLAEQ 215 (305)
Q Consensus 172 ---g---~-----------------~~~~a~~~gv~~~V~iSS~~~~~~~~------~--~~----~~~~-~~~~~~~~~ 215 (305)
. . +.++|++.+++++ ++||..+|.... + .. +... ..+...|..
T Consensus 69 ~~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~gv~~v-~~sS~~vy~~~~~~p~~~~~~~~Ee~~p~~~~s~Yg~sK~~ 147 (298)
T PLN02778 69 GRPNVDWCESHKVETIRANVVGTLTLADVCRERGLVLT-NYATGCIFEYDDAHPLGSGIGFKEEDTPNFTGSFYSKTKAM 147 (298)
T ss_pred CCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCEE-EEecceEeCCCCCCCcccCCCCCcCCCCCCCCCchHHHHHH
Confidence 0 0 3456777888755 455555442100 0 00 0001 112334667
Q ss_pred HHHHHHhCCCCEEEEecCCccc-CCCCCccee---eecC---CCCCCccCHHHHHHHHHHHhhCCCCCCcEEEEecCC-c
Q 021928 216 DESMLMASGIPYTIIRTGVLQN-TPGGKQGFQ---FEEG---CAANGSLSKEDAAFICVEALESIPQTGLIFEVVNGE-E 287 (305)
Q Consensus 216 aE~~l~~~gi~~tilRPg~l~~-~~~~~~~~~---~~~~---~~~~~~Is~~DvA~~iv~~l~~~~~~~~~~~v~~g~-~ 287 (305)
+|.+++... +..++|++...+ +......+. .... .....+++++|++++++.+++... +.+||+++++ .
T Consensus 148 ~E~~~~~y~-~~~~lr~~~~~~~~~~~~~~fi~~~~~~~~~~~~~~s~~yv~D~v~al~~~l~~~~--~g~yNigs~~~i 224 (298)
T PLN02778 148 VEELLKNYE-NVCTLRVRMPISSDLSNPRNFITKITRYEKVVNIPNSMTILDELLPISIEMAKRNL--TGIYNFTNPGVV 224 (298)
T ss_pred HHHHHHHhh-ccEEeeecccCCcccccHHHHHHHHHcCCCeeEcCCCCEEHHHHHHHHHHHHhCCC--CCeEEeCCCCcc
Confidence 888877643 566788866322 211100000 0000 011358899999999999987543 3599998765 5
Q ss_pred CHHHHHHHHHHhhhh
Q 021928 288 KVSDWKKCFSRLMEK 302 (305)
Q Consensus 288 s~~d~~~~~~~l~~~ 302 (305)
++.|+++++.++.+.
T Consensus 225 S~~el~~~i~~~~~~ 239 (298)
T PLN02778 225 SHNEILEMYRDYIDP 239 (298)
T ss_pred cHHHHHHHHHHHhCC
Confidence 899999999998874
|
|
| >PRK12937 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=5.5e-14 Score=124.50 Aligned_cols=190 Identities=14% Similarity=0.110 Sum_probs=121.3
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchh-h------hhcCCCcEEeecCCCCHHHHHHHhc-------
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-M------ESFGTYVESMAGDASNKKFLKTALR------- 161 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~-~------~~~~~~v~~v~~D~~d~~~~~~~~~------- 161 (305)
.++++|+||||+|+||++++++|+++|++|+++.|+.... . ...+.++.++.+|+.|.+++.++++
T Consensus 3 ~~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 82 (245)
T PRK12937 3 LSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAFG 82 (245)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 3468999999999999999999999999998887764321 1 1123468899999999988887776
Q ss_pred CccEEEECCcch--------------------------Hhhhhhh--cCCCEEEEEcccccccCCCCcccccchHHH--H
Q 021928 162 GVRSIICPSEGF--------------------------ISNAGSL--KGVQHVILLSQLSVYRGSGGIQALMKGNAR--K 211 (305)
Q Consensus 162 ~~d~Vi~~~~g~--------------------------~~~~a~~--~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~--~ 211 (305)
++|+|||+++.. +...+.. ....+||++||.....+.+....|...+.. .
T Consensus 83 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~ 162 (245)
T PRK12937 83 RIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTSVIALPLPGYGPYAASKAAVEG 162 (245)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeeccccCCCCCCchhHHHHHHHHH
Confidence 579999884310 0111111 123589999998776655444455433221 1
Q ss_pred HHHHHHHHHHhCCCCEEEEecCCcccCC--CCCccee---eecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEEEEec
Q 021928 212 LAEQDESMLMASGIPYTIIRTGVLQNTP--GGKQGFQ---FEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVN 284 (305)
Q Consensus 212 ~~~~aE~~l~~~gi~~tilRPg~l~~~~--~~~~~~~---~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~v~~ 284 (305)
+.+.....+...++.++.++||++.... ....... +........+.+++|+|+.+..++..+. ..++.+++.+
T Consensus 163 ~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~~ 242 (245)
T PRK12937 163 LVHVLANELRGRGITVNAVAPGPVATELFFNGKSAEQIDQLAGLAPLERLGTPEEIAAAVAFLAGPDGAWVNGQVLRVNG 242 (245)
T ss_pred HHHHHHHHhhhcCeEEEEEEeCCccCchhcccCCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCccccCccccEEEeCC
Confidence 1111122234468999999999864332 1100000 0011122345688999999999997543 3578888875
Q ss_pred C
Q 021928 285 G 285 (305)
Q Consensus 285 g 285 (305)
|
T Consensus 243 g 243 (245)
T PRK12937 243 G 243 (245)
T ss_pred C
Confidence 4
|
|
| >PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=6.7e-14 Score=124.55 Aligned_cols=190 Identities=14% Similarity=0.151 Sum_probs=121.5
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcC-cchhh---hhcCCCcEEeecCCCCHHHHHHHhcC--------cc
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKD-KRNAM---ESFGTYVESMAGDASNKKFLKTALRG--------VR 164 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~-~~~~~---~~~~~~v~~v~~D~~d~~~~~~~~~~--------~d 164 (305)
++++|+||||+|+||++++++|+++|++|+++.++ +.+.. ...+.++.++.+|+.|.+++.++++. +|
T Consensus 4 ~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~id 83 (253)
T PRK08642 4 SEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADELGDRAIALQADVTDREQVQAMFATATEHFGKPIT 83 (253)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCe
Confidence 34899999999999999999999999999887654 33221 12334688999999998888777653 89
Q ss_pred EEEECCcc----------h----------------------Hhhh----hhhcCCCEEEEEcccccccCCCCcccccchH
Q 021928 165 SIICPSEG----------F----------------------ISNA----GSLKGVQHVILLSQLSVYRGSGGIQALMKGN 208 (305)
Q Consensus 165 ~Vi~~~~g----------~----------------------~~~~----a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~ 208 (305)
++||+++. . +..+ ....+..+||++||.....+..+...|..++
T Consensus 84 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK 163 (253)
T PRK08642 84 TVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGFGRIINIGTNLFQNPVVPYHDYTTAK 163 (253)
T ss_pred EEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCCeEEEEECCccccCCCCCccchHHHH
Confidence 99987421 0 1111 1234567999999876554433344444332
Q ss_pred HH--HHHHHHHHHHHhCCCCEEEEecCCcccCCCCC--ccee---eecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcE
Q 021928 209 AR--KLAEQDESMLMASGIPYTIIRTGVLQNTPGGK--QGFQ---FEEGCAANGSLSKEDAAFICVEALESIP--QTGLI 279 (305)
Q Consensus 209 ~~--~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~--~~~~---~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~ 279 (305)
.. .+.+.....+...++.++.|+||++....... .... +........+.+++|+|++++.++..+. ..|+.
T Consensus 164 ~a~~~l~~~la~~~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~ 243 (253)
T PRK08642 164 AALLGLTRNLAAELGPYGITVNMVSGGLLRTTDASAATPDEVFDLIAATTPLRKVTTPQEFADAVLFFASPWARAVTGQN 243 (253)
T ss_pred HHHHHHHHHHHHHhCccCeEEEEEeecccCCchhhccCCHHHHHHHHhcCCcCCCCCHHHHHHHHHHHcCchhcCccCCE
Confidence 21 11111122233468999999999964322111 0000 0011122457899999999999997543 56888
Q ss_pred EEEecCC
Q 021928 280 FEVVNGE 286 (305)
Q Consensus 280 ~~v~~g~ 286 (305)
+.+.+|.
T Consensus 244 ~~vdgg~ 250 (253)
T PRK08642 244 LVVDGGL 250 (253)
T ss_pred EEeCCCe
Confidence 8888763
|
|
| >TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.60 E-value=5.5e-14 Score=124.17 Aligned_cols=188 Identities=16% Similarity=0.121 Sum_probs=122.7
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCCeEEEEEc-Ccchhhh------hcCCCcEEeecCCCCHHHHHHHhc-------Ccc
Q 021928 99 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVK-DKRNAME------SFGTYVESMAGDASNKKFLKTALR-------GVR 164 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R-~~~~~~~------~~~~~v~~v~~D~~d~~~~~~~~~-------~~d 164 (305)
|++|||||+|+||++++++|+++|++|+++.| ++....+ ..+.++.++.+|++|.+++.++++ .+|
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 80 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELGPID 80 (242)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCc
Confidence 58999999999999999999999999999988 4333211 123468899999999888766554 479
Q ss_pred EEEECCcch------------------------------HhhhhhhcCCCEEEEEcccccccCCCCcccccchHH--HHH
Q 021928 165 SIICPSEGF------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA--RKL 212 (305)
Q Consensus 165 ~Vi~~~~g~------------------------------~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~--~~~ 212 (305)
.|||+++.. +...+++.+.++||++||.....+..+...|...+. ..+
T Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sk~a~~~~ 160 (242)
T TIGR01829 81 VLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERGWGRIINISSVNGQKGQFGQTNYSAAKAGMIGF 160 (242)
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCCCCcchhHHHHHHHHHH
Confidence 999884310 112234567789999999866554444444443322 111
Q ss_pred HHHHHHHHHhCCCCEEEEecCCcccCCCCC-ccee---eecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEEEEecCC
Q 021928 213 AEQDESMLMASGIPYTIIRTGVLQNTPGGK-QGFQ---FEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVNGE 286 (305)
Q Consensus 213 ~~~aE~~l~~~gi~~tilRPg~l~~~~~~~-~~~~---~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~v~~g~ 286 (305)
.+.....+...++.++.++||++.+..... .... +........+..++|+|+++..++.++. ..|+.+.+.+|.
T Consensus 161 ~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~G~~~~~~gg~ 240 (242)
T TIGR01829 161 TKALAQEGATKGVTVNTISPGYIATDMVMAMREDVLNSIVAQIPVGRLGRPEEIAAAVAFLASEEAGYITGATLSINGGL 240 (242)
T ss_pred HHHHHHHhhhhCeEEEEEeeCCCcCccccccchHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCccCCEEEecCCc
Confidence 222223344579999999999965433211 0000 0011122345678999999998886543 468899988764
|
(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. |
| >PRK06139 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=7.3e-14 Score=130.34 Aligned_cols=178 Identities=12% Similarity=0.052 Sum_probs=118.3
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh------cCCCcEEeecCCCCHHHHHHHh-------cCc
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTAL-------RGV 163 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~~~v~~v~~D~~d~~~~~~~~-------~~~ 163 (305)
.+++|+||||+|+||++++++|+++|++|+++.|+++...+. .+.++.++.+|++|.+++++++ ..+
T Consensus 6 ~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 85 (330)
T PRK06139 6 HGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFGGRI 85 (330)
T ss_pred CCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence 458999999999999999999999999999999997664321 2346778899999998888776 457
Q ss_pred cEEEECCcc----h--------------------------HhhhhhhcCCCEEEEEcccccccCCCCcccccchHH--HH
Q 021928 164 RSIICPSEG----F--------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA--RK 211 (305)
Q Consensus 164 d~Vi~~~~g----~--------------------------~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~--~~ 211 (305)
|++|++++. . .....++.+..+||++||...+.+.+....|..++. ..
T Consensus 86 D~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~~g~iV~isS~~~~~~~p~~~~Y~asKaal~~ 165 (330)
T PRK06139 86 DVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQGHGIFINMISLGGFAAQPYAAAYSASKFGLRG 165 (330)
T ss_pred CEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhcCCCCCchhHHHHHHHHHH
Confidence 999988431 0 011123345578999999887766555555544332 11
Q ss_pred HHHHHHHHHHh-CCCCEEEEecCCcccCCC-CCcceeeecCCCCCCccCHHHHHHHHHHHhhCCC
Q 021928 212 LAEQDESMLMA-SGIPYTIIRTGVLQNTPG-GKQGFQFEEGCAANGSLSKEDAAFICVEALESIP 274 (305)
Q Consensus 212 ~~~~aE~~l~~-~gi~~tilRPg~l~~~~~-~~~~~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~ 274 (305)
+.+.....+.. .++.++.|.||.+..... ......-.........++++|+|++++.++.++.
T Consensus 166 ~~~sL~~El~~~~gI~V~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~pe~vA~~il~~~~~~~ 230 (330)
T PRK06139 166 FSEALRGELADHPDIHVCDVYPAFMDTPGFRHGANYTGRRLTPPPPVYDPRRVAKAVVRLADRPR 230 (330)
T ss_pred HHHHHHHHhCCCCCeEEEEEecCCccCcccccccccccccccCCCCCCCHHHHHHHHHHHHhCCC
Confidence 12222222334 489999999999653321 1111100011112346799999999999998664
|
|
| >PRK07856 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=5.2e-14 Score=125.74 Aligned_cols=187 Identities=16% Similarity=0.186 Sum_probs=121.6
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcC-------ccEEEEC
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRG-------VRSIICP 169 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~-------~d~Vi~~ 169 (305)
.+++++||||+|+||++++++|+++|++|++++|++++ ...+..+.++.+|+.|.+++.++++. +|+|||+
T Consensus 5 ~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~--~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ 82 (252)
T PRK07856 5 TGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE--TVDGRPAEFHAADVRDPDQVAALVDAIVERHGRLDVLVNN 82 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh--hhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 46999999999999999999999999999999998754 12234688999999999888777653 5999997
Q ss_pred Ccch--------------------------Hhhhh----hh-cCCCEEEEEcccccccCCCCcccccchHHHH--HHHHH
Q 021928 170 SEGF--------------------------ISNAG----SL-KGVQHVILLSQLSVYRGSGGIQALMKGNARK--LAEQD 216 (305)
Q Consensus 170 ~~g~--------------------------~~~~a----~~-~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~~--~~~~a 216 (305)
++.. +.+.+ .+ .+..+||++||.....+......|..++... +.+..
T Consensus 83 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~a~~~l~~~l 162 (252)
T PRK07856 83 AGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRRPSPGTAAYGAAKAGLLNLTRSL 162 (252)
T ss_pred CCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCCCCCCCchhHHHHHHHHHHHHHH
Confidence 4310 11111 11 2446899999988776655555554433211 11111
Q ss_pred HHHHHhCCCCEEEEecCCcccCCCCC---cce---eeecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEEEEecCC
Q 021928 217 ESMLMASGIPYTIIRTGVLQNTPGGK---QGF---QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVNGE 286 (305)
Q Consensus 217 E~~l~~~gi~~tilRPg~l~~~~~~~---~~~---~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~v~~g~ 286 (305)
...+... +.++.++||.+....... ... .+...........++|+|++++.++.... ..|+.+.+.+|.
T Consensus 163 a~e~~~~-i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~va~~~~~L~~~~~~~i~G~~i~vdgg~ 239 (252)
T PRK07856 163 AVEWAPK-VRVNAVVVGLVRTEQSELHYGDAEGIAAVAATVPLGRLATPADIAWACLFLASDLASYVSGANLEVHGGG 239 (252)
T ss_pred HHHhcCC-eEEEEEEeccccChHHhhhccCHHHHHHHhhcCCCCCCcCHHHHHHHHHHHcCcccCCccCCEEEECCCc
Confidence 1112223 889999999864321110 000 00011112345678999999999997543 468889888765
|
|
| >PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=9.1e-14 Score=122.57 Aligned_cols=186 Identities=14% Similarity=0.117 Sum_probs=121.9
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCH-HHHHHHhcCccEEEECCcc---
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNK-KFLKTALRGVRSIICPSEG--- 172 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~-~~~~~~~~~~d~Vi~~~~g--- 172 (305)
++++++||||+|+||++++++|+++|++|+++.|++... ...++.++.+|+.+. +.+.+.+..+|++|++++.
T Consensus 4 ~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~id~lv~~ag~~~~ 80 (235)
T PRK06550 4 MTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPD---LSGNFHFLQLDLSDDLEPLFDWVPSVDILCNTAGILDD 80 (235)
T ss_pred CCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCcccc---cCCcEEEEECChHHHHHHHHHhhCCCCEEEECCCCCCC
Confidence 458999999999999999999999999999999986432 234688999999986 5555666778999987431
Q ss_pred --h----------------------Hhh----hhhhcCCCEEEEEcccccccCCCCcccccchHH--HHHHHHHHHHHHh
Q 021928 173 --F----------------------ISN----AGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA--RKLAEQDESMLMA 222 (305)
Q Consensus 173 --~----------------------~~~----~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~--~~~~~~aE~~l~~ 222 (305)
. +.. ...+.+.++||++||.....+......|...+. ..+.+.....+..
T Consensus 81 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~ 160 (235)
T PRK06550 81 YKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIASFVAGGGGAAYTASKHALAGFTKQLALDYAK 160 (235)
T ss_pred CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCCCCcccHHHHHHHHHHHHHHHHHhhh
Confidence 0 011 122344568999999877665544445544332 1112222223345
Q ss_pred CCCCEEEEecCCcccCCCCCc---ce---eeecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEEEEecC
Q 021928 223 SGIPYTIIRTGVLQNTPGGKQ---GF---QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVNG 285 (305)
Q Consensus 223 ~gi~~tilRPg~l~~~~~~~~---~~---~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~v~~g 285 (305)
.++++++++||++........ .. .+........+.+.+|+|++++.++.+.. ..++++.+.+|
T Consensus 161 ~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~~~~g~~~~~~gg 231 (235)
T PRK06550 161 DGIQVFGIAPGAVKTPMTAADFEPGGLADWVARETPIKRWAEPEEVAELTLFLASGKADYMQGTIVPIDGG 231 (235)
T ss_pred cCeEEEEEeeCCccCcccccccCchHHHHHHhccCCcCCCCCHHHHHHHHHHHcChhhccCCCcEEEECCc
Confidence 799999999999643321100 00 00011122346789999999999996543 35777777765
|
|
| >PRK12743 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=8.6e-14 Score=124.69 Aligned_cols=190 Identities=18% Similarity=0.135 Sum_probs=121.8
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcc-hhhh------hcCCCcEEeecCCCCHHHHHHHhc-------C
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR-NAME------SFGTYVESMAGDASNKKFLKTALR-------G 162 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~-~~~~------~~~~~v~~v~~D~~d~~~~~~~~~-------~ 162 (305)
++++|+||||+|+||++++++|+++|++|+++.|+.. ...+ ..+.++.++.+|++|.++++.+++ .
T Consensus 1 ~~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 80 (256)
T PRK12743 1 MAQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGR 80 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 3579999999999999999999999999998866433 2111 124468899999999888776664 4
Q ss_pred ccEEEECCcch--------------------------Hhhhh----hhc-CCCEEEEEcccccccCCCCcccccchHHH-
Q 021928 163 VRSIICPSEGF--------------------------ISNAG----SLK-GVQHVILLSQLSVYRGSGGIQALMKGNAR- 210 (305)
Q Consensus 163 ~d~Vi~~~~g~--------------------------~~~~a----~~~-gv~~~V~iSS~~~~~~~~~~~~~~~~~~~- 210 (305)
+|++||+++.. +..++ .+. .-++||++||.....+..+...|...+..
T Consensus 81 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~a~ 160 (256)
T PRK12743 81 IDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEHTPLPGASAYTAAKHAL 160 (256)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeeccccCCCCCcchhHHHHHHH
Confidence 79999884310 11111 112 23589999998776655555555443321
Q ss_pred -HHHHHHHHHHHhCCCCEEEEecCCcccCCCCCc-c-e--eeecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEEEEe
Q 021928 211 -KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQ-G-F--QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVV 283 (305)
Q Consensus 211 -~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~~-~-~--~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~v~ 283 (305)
.+.+.....+...++.++.|+||.+........ . . ............+++|+|+++..++.... ..+..+.+.
T Consensus 161 ~~l~~~la~~~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~d 240 (256)
T PRK12743 161 GGLTKAMALELVEHGILVNAVAPGAIATPMNGMDDSDVKPDSRPGIPLGRPGDTHEIASLVAWLCSEGASYTTGQSLIVD 240 (256)
T ss_pred HHHHHHHHHHhhhhCeEEEEEEeCCccCccccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCccccCcCCcEEEEC
Confidence 111222223445789999999998654321110 0 0 00011112345688999999999987544 357888888
Q ss_pred cCC
Q 021928 284 NGE 286 (305)
Q Consensus 284 ~g~ 286 (305)
+|.
T Consensus 241 gg~ 243 (256)
T PRK12743 241 GGF 243 (256)
T ss_pred CCc
Confidence 774
|
|
| >PRK08643 acetoin reductase; Validated | Back alignment and domain information |
|---|
Probab=99.60 E-value=7.2e-14 Score=124.91 Aligned_cols=188 Identities=15% Similarity=0.105 Sum_probs=121.3
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh------cCCCcEEeecCCCCHHHHHHHhc-------Ccc
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GVR 164 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~~~v~~v~~D~~d~~~~~~~~~-------~~d 164 (305)
+++++||||+|+||++++++|+++|++|++++|+.+...+. .+.++.++.+|++|.+++.++++ ++|
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 81 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDLN 81 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 58999999999999999999999999999999987542211 13467889999999888776664 579
Q ss_pred EEEECCcch--------------------------Hh----hhhhhcC-CCEEEEEcccccccCCCCcccccchHHH--H
Q 021928 165 SIICPSEGF--------------------------IS----NAGSLKG-VQHVILLSQLSVYRGSGGIQALMKGNAR--K 211 (305)
Q Consensus 165 ~Vi~~~~g~--------------------------~~----~~a~~~g-v~~~V~iSS~~~~~~~~~~~~~~~~~~~--~ 211 (305)
+|||+++.. +. +..++.+ -.+||++||.....+......|...+.. .
T Consensus 82 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~ 161 (256)
T PRK08643 82 VVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVVGNPELAVYSSTKFAVRG 161 (256)
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECccccccCCCCCchhHHHHHHHHH
Confidence 999884310 00 1112222 3589999998776554444445443321 1
Q ss_pred HHHHHHHHHHhCCCCEEEEecCCcccCCCC----------Cccee-----eecCCCCCCccCHHHHHHHHHHHhhCCC--
Q 021928 212 LAEQDESMLMASGIPYTIIRTGVLQNTPGG----------KQGFQ-----FEEGCAANGSLSKEDAAFICVEALESIP-- 274 (305)
Q Consensus 212 ~~~~aE~~l~~~gi~~tilRPg~l~~~~~~----------~~~~~-----~~~~~~~~~~Is~~DvA~~iv~~l~~~~-- 274 (305)
+.+.....+...++.++.|+||++...... ..... +........+.+.+|+|.++..++....
T Consensus 162 ~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~L~~~~~~~ 241 (256)
T PRK08643 162 LTQTAARDLASEGITVNAYAPGIVKTPMMFDIAHQVGENAGKPDEWGMEQFAKDITLGRLSEPEDVANCVSFLAGPDSDY 241 (256)
T ss_pred HHHHHHHHhcccCcEEEEEeeCCCcChhhhHHHhhhccccCCCchHHHHHHhccCCCCCCcCHHHHHHHHHHHhCccccC
Confidence 112222234457899999999986432110 00000 0001112345688999999999997543
Q ss_pred CCCcEEEEecC
Q 021928 275 QTGLIFEVVNG 285 (305)
Q Consensus 275 ~~~~~~~v~~g 285 (305)
..|+.+.+.+|
T Consensus 242 ~~G~~i~vdgg 252 (256)
T PRK08643 242 ITGQTIIVDGG 252 (256)
T ss_pred ccCcEEEeCCC
Confidence 46788888765
|
|
| >PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=4.7e-14 Score=124.53 Aligned_cols=188 Identities=15% Similarity=0.197 Sum_probs=118.4
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh---cC--CCcEEeecCCCCHHHHHHHhc-------Ccc
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FG--TYVESMAGDASNKKFLKTALR-------GVR 164 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~~--~~v~~v~~D~~d~~~~~~~~~-------~~d 164 (305)
++++|+||||+|+||++++++|+++|++|++++|++++.... .. .++.++.+|+.|.+++.++++ ++|
T Consensus 4 ~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 83 (238)
T PRK05786 4 KGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVLNAID 83 (238)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence 358999999999999999999999999999999987654322 11 257889999999888776554 468
Q ss_pred EEEECCcchH------------------------hhhh-hh-cCCCEEEEEcccccc-cCCCCcccccchHHH--HHHHH
Q 021928 165 SIICPSEGFI------------------------SNAG-SL-KGVQHVILLSQLSVY-RGSGGIQALMKGNAR--KLAEQ 215 (305)
Q Consensus 165 ~Vi~~~~g~~------------------------~~~a-~~-~gv~~~V~iSS~~~~-~~~~~~~~~~~~~~~--~~~~~ 215 (305)
.++++++... .... .. ..-.+||++||.... .+......|..++.. .+.+.
T Consensus 84 ~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~~Y~~sK~~~~~~~~~ 163 (238)
T PRK05786 84 GLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMSGIYKASPDQLSYAVAKAGLAKAVEI 163 (238)
T ss_pred EEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecchhcccCCCCchHHHHHHHHHHHHHHH
Confidence 8987743210 0000 00 112579999987653 222222334332221 11112
Q ss_pred HHHHHHhCCCCEEEEecCCcccCCCCCcceeeecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEEEEecC
Q 021928 216 DESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVNG 285 (305)
Q Consensus 216 aE~~l~~~gi~~tilRPg~l~~~~~~~~~~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~v~~g 285 (305)
....+...+++++++|||++.+.......... ........++.+|+|++++.++..+. ..++.+.+.++
T Consensus 164 ~~~~~~~~gi~v~~i~pg~v~~~~~~~~~~~~-~~~~~~~~~~~~~va~~~~~~~~~~~~~~~g~~~~~~~~ 234 (238)
T PRK05786 164 LASELLGRGIRVNGIAPTTISGDFEPERNWKK-LRKLGDDMAPPEDFAKVIIWLLTDEADWVDGVVIPVDGG 234 (238)
T ss_pred HHHHHhhcCeEEEEEecCccCCCCCchhhhhh-hccccCCCCCHHHHHHHHHHHhcccccCccCCEEEECCc
Confidence 22333457999999999997654221111000 01112246899999999999997644 35777777654
|
|
| >PRK08277 D-mannonate oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.59 E-value=9.4e-14 Score=125.83 Aligned_cols=191 Identities=14% Similarity=0.140 Sum_probs=126.0
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh------cCCCcEEeecCCCCHHHHHHHhc-------Cc
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GV 163 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~~~v~~v~~D~~d~~~~~~~~~-------~~ 163 (305)
.+++++||||+|+||++++++|+++|++|++++|+.+...+. .+.++.++.+|+.|.+++..+++ .+
T Consensus 9 ~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i 88 (278)
T PRK08277 9 KGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDFGPC 88 (278)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 458999999999999999999999999999999986543221 13457889999999887776654 67
Q ss_pred cEEEECCcch---------------------------------------------HhhhhhhcCCCEEEEEcccccccCC
Q 021928 164 RSIICPSEGF---------------------------------------------ISNAGSLKGVQHVILLSQLSVYRGS 198 (305)
Q Consensus 164 d~Vi~~~~g~---------------------------------------------~~~~a~~~gv~~~V~iSS~~~~~~~ 198 (305)
|++||+++.. +...+.+.+..+||++||..++.+.
T Consensus 89 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~ 168 (278)
T PRK08277 89 DILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRKGGNIINISSMNAFTPL 168 (278)
T ss_pred CEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhcCCC
Confidence 9999884310 0111233456789999999888766
Q ss_pred CCcccccchHHH--HHHHHHHHHHHhCCCCEEEEecCCcccCCCCC-----cce---e---eecCCCCCCccCHHHHHHH
Q 021928 199 GGIQALMKGNAR--KLAEQDESMLMASGIPYTIIRTGVLQNTPGGK-----QGF---Q---FEEGCAANGSLSKEDAAFI 265 (305)
Q Consensus 199 ~~~~~~~~~~~~--~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~-----~~~---~---~~~~~~~~~~Is~~DvA~~ 265 (305)
.....|..++.. .+.+.....+...++++..|+||++....... ... . +........+...+|+|++
T Consensus 169 ~~~~~Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~ 248 (278)
T PRK08277 169 TKVPAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQNRALLFNEDGSLTERANKILAHTPMGRFGKPEELLGT 248 (278)
T ss_pred CCCchhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCcCcchhhhhccccccchhHHHHHhccCCccCCCCHHHHHHH
Confidence 555555443321 11111222234468999999999965332110 000 0 0001112345688999999
Q ss_pred HHHHhhC-CC--CCCcEEEEecCCc
Q 021928 266 CVEALES-IP--QTGLIFEVVNGEE 287 (305)
Q Consensus 266 iv~~l~~-~~--~~~~~~~v~~g~~ 287 (305)
++.++.. .. ..++.+.+.+|..
T Consensus 249 ~~~l~s~~~~~~~tG~~i~vdgG~~ 273 (278)
T PRK08277 249 LLWLADEKASSFVTGVVLPVDGGFS 273 (278)
T ss_pred HHHHcCccccCCcCCCEEEECCCee
Confidence 9998876 33 3688888887743
|
|
| >PRK06172 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.59 E-value=5.3e-14 Score=125.54 Aligned_cols=190 Identities=13% Similarity=0.076 Sum_probs=125.6
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh------hcCCCcEEeecCCCCHHHHHHHhc-------Cc
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTALR-------GV 163 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~------~~~~~v~~v~~D~~d~~~~~~~~~-------~~ 163 (305)
.+++|+||||+|+||++++++|+++|++|+++.|+++...+ ..+.++.++.+|++|.+++..+++ .+
T Consensus 6 ~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~i 85 (253)
T PRK06172 6 SGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAYGRL 85 (253)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence 45899999999999999999999999999999998765321 123468899999999888877665 45
Q ss_pred cEEEECCcc------h---------------------H----hhhhhhcCCCEEEEEcccccccCCCCcccccchHHH--
Q 021928 164 RSIICPSEG------F---------------------I----SNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR-- 210 (305)
Q Consensus 164 d~Vi~~~~g------~---------------------~----~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~-- 210 (305)
|++||+++. . + .....+.+..++|++||..++.+......|...+..
T Consensus 86 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~sKaa~~ 165 (253)
T PRK06172 86 DYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGGGAIVNTASVAGLGAAPKMSIYAASKHAVI 165 (253)
T ss_pred CEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECchhhccCCCCCchhHHHHHHHH
Confidence 999988331 0 0 011223455799999998877665555555443321
Q ss_pred HHHHHHHHHHHhCCCCEEEEecCCcccCCCCC----ccee---eecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEEE
Q 021928 211 KLAEQDESMLMASGIPYTIIRTGVLQNTPGGK----QGFQ---FEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFE 281 (305)
Q Consensus 211 ~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~----~~~~---~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~ 281 (305)
.+.+.....+...+++++.++||.+....... .... +..........+++|+|+.++.++.+.. ..|+.+.
T Consensus 166 ~~~~~la~e~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ia~~~~~l~~~~~~~~~G~~i~ 245 (253)
T PRK06172 166 GLTKSAAIEYAKKGIRVNAVCPAVIDTDMFRRAYEADPRKAEFAAAMHPVGRIGKVEEVASAVLYLCSDGASFTTGHALM 245 (253)
T ss_pred HHHHHHHHHhcccCeEEEEEEeCCccChhhhhhcccChHHHHHHhccCCCCCccCHHHHHHHHHHHhCccccCcCCcEEE
Confidence 11122222233468999999999864322110 0000 0011112345689999999999997543 4688888
Q ss_pred EecCC
Q 021928 282 VVNGE 286 (305)
Q Consensus 282 v~~g~ 286 (305)
+.+|.
T Consensus 246 ~dgg~ 250 (253)
T PRK06172 246 VDGGA 250 (253)
T ss_pred ECCCc
Confidence 88764
|
|
| >PRK08213 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.59 E-value=8.2e-14 Score=124.86 Aligned_cols=191 Identities=15% Similarity=0.130 Sum_probs=120.7
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh------cCCCcEEeecCCCCHHHHHHHhc-------C
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------G 162 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~~~v~~v~~D~~d~~~~~~~~~-------~ 162 (305)
..+++++||||+|+||++++++|+++|++|++++|+.++.... .+.++.++.+|++|.+++.++++ .
T Consensus 10 ~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~~~ 89 (259)
T PRK08213 10 LSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERFGH 89 (259)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 3458999999999999999999999999999999987653221 12457889999999988866553 5
Q ss_pred ccEEEECCcch--------------------------Hhhhh-----hhcCCCEEEEEcccccccCCCCc----ccccch
Q 021928 163 VRSIICPSEGF--------------------------ISNAG-----SLKGVQHVILLSQLSVYRGSGGI----QALMKG 207 (305)
Q Consensus 163 ~d~Vi~~~~g~--------------------------~~~~a-----~~~gv~~~V~iSS~~~~~~~~~~----~~~~~~ 207 (305)
+|+|||+++.. +.+++ ...+.++||++||...+.+.... ..|...
T Consensus 90 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~~~~~~~~~~~~~~Y~~s 169 (259)
T PRK08213 90 VDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGLGGNPPEVMDTIAYNTS 169 (259)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCccccCcchHHHH
Confidence 79999984310 11222 22366799999998665433221 223222
Q ss_pred HH--HHHHHHHHHHHHhCCCCEEEEecCCcccCCCCC--cce--eeecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcE
Q 021928 208 NA--RKLAEQDESMLMASGIPYTIIRTGVLQNTPGGK--QGF--QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLI 279 (305)
Q Consensus 208 ~~--~~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~--~~~--~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~ 279 (305)
++ ..+.+.....+...++.+++++||++....... ... ..........+...+|+|+++..++.... ..|+.
T Consensus 170 Ka~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~ 249 (259)
T PRK08213 170 KGAVINFTRALAAEWGPHGIRVNAIAPGFFPTKMTRGTLERLGEDLLAHTPLGRLGDDEDLKGAALLLASDASKHITGQI 249 (259)
T ss_pred HHHHHHHHHHHHHHhcccCEEEEEEecCcCCCcchhhhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccCCE
Confidence 11 111111222233468999999999965432111 000 00011112234578999999998886543 36788
Q ss_pred EEEecCC
Q 021928 280 FEVVNGE 286 (305)
Q Consensus 280 ~~v~~g~ 286 (305)
+.+.++-
T Consensus 250 ~~~~~~~ 256 (259)
T PRK08213 250 LAVDGGV 256 (259)
T ss_pred EEECCCe
Confidence 8887653
|
|
| >PRK06701 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.59 E-value=1.7e-13 Score=125.44 Aligned_cols=192 Identities=18% Similarity=0.200 Sum_probs=124.6
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchh----hh---hcCCCcEEeecCCCCHHHHHHHhc------
Q 021928 95 PEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA----ME---SFGTYVESMAGDASNKKFLKTALR------ 161 (305)
Q Consensus 95 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~----~~---~~~~~v~~v~~D~~d~~~~~~~~~------ 161 (305)
+.++|+++||||+|+||++++++|+++|++|+++.|+.... .+ ..+.++.++.+|+.|.+.+..+++
T Consensus 43 ~~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~ 122 (290)
T PRK06701 43 KLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVREL 122 (290)
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 33468999999999999999999999999999999875331 11 113457889999999888877664
Q ss_pred -CccEEEECCcch---------------------------Hhhhhhh--cCCCEEEEEcccccccCCCCcccccchHH--
Q 021928 162 -GVRSIICPSEGF---------------------------ISNAGSL--KGVQHVILLSQLSVYRGSGGIQALMKGNA-- 209 (305)
Q Consensus 162 -~~d~Vi~~~~g~---------------------------~~~~a~~--~gv~~~V~iSS~~~~~~~~~~~~~~~~~~-- 209 (305)
.+|+|||+++.. +..++.. ....+||++||..++.+......|..++.
T Consensus 123 ~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~~sK~a~ 202 (290)
T PRK06701 123 GRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSITGYEGNETLIDYSATKGAI 202 (290)
T ss_pred CCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEecccccCCCCCcchhHHHHHHH
Confidence 579999874310 1111111 12358999999888766555545544332
Q ss_pred HHHHHHHHHHHHhCCCCEEEEecCCcccCCCCC----cce-eeecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEEEE
Q 021928 210 RKLAEQDESMLMASGIPYTIIRTGVLQNTPGGK----QGF-QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEV 282 (305)
Q Consensus 210 ~~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~----~~~-~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~v 282 (305)
..+.+.....+...+++++.|+||.+....... +.. .+........+.+++|+|++++.++.+.. ..+.++.+
T Consensus 203 ~~l~~~la~~~~~~gIrv~~i~pG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~ll~~~~~~~~G~~i~i 282 (290)
T PRK06701 203 HAFTRSLAQSLVQKGIRVNAVAPGPIWTPLIPSDFDEEKVSQFGSNTPMQRPGQPEELAPAYVFLASPDSSYITGQMLHV 282 (290)
T ss_pred HHHHHHHHHHhhhcCeEEEEEecCCCCCcccccccCHHHHHHHHhcCCcCCCcCHHHHHHHHHHHcCcccCCccCcEEEe
Confidence 111122222233468999999999854332110 000 01111223457889999999999997643 36788888
Q ss_pred ecCC
Q 021928 283 VNGE 286 (305)
Q Consensus 283 ~~g~ 286 (305)
.+|.
T Consensus 283 dgg~ 286 (290)
T PRK06701 283 NGGV 286 (290)
T ss_pred CCCc
Confidence 8764
|
|
| >PLN02503 fatty acyl-CoA reductase 2 | Back alignment and domain information |
|---|
Probab=99.59 E-value=9e-14 Score=138.18 Aligned_cols=204 Identities=14% Similarity=0.174 Sum_probs=134.8
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCC---eEEEEEcCcch--hh-----hh--------------------cCCCcEEe
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRT---RIKALVKDKRN--AM-----ES--------------------FGTYVESM 146 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~---~V~~~~R~~~~--~~-----~~--------------------~~~~v~~v 146 (305)
.+++|+|||||||||++|+++|++.+. +|++++|.... .. +. ...++.++
T Consensus 118 ~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~v 197 (605)
T PLN02503 118 RGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVPV 197 (605)
T ss_pred cCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEEE
Confidence 469999999999999999999998764 68999996532 10 10 02358899
Q ss_pred ecCCCCH------HHHHHHhcCccEEEECCcc-------------------hHhhhhhhc-CCCEEEEEcccccccCCCC
Q 021928 147 AGDASNK------KFLKTALRGVRSIICPSEG-------------------FISNAGSLK-GVQHVILLSQLSVYRGSGG 200 (305)
Q Consensus 147 ~~D~~d~------~~~~~~~~~~d~Vi~~~~g-------------------~~~~~a~~~-gv~~~V~iSS~~~~~~~~~ 200 (305)
.+|+.++ +..+.+.+++|+|||+++. .+.+++++. ++++||++||..++....+
T Consensus 198 ~GDl~d~~LGLs~~~~~~L~~~vDiVIH~AA~v~f~~~~~~a~~vNV~GT~nLLelA~~~~~lk~fV~vSTayVyG~~~G 277 (605)
T PLN02503 198 VGNVCESNLGLEPDLADEIAKEVDVIINSAANTTFDERYDVAIDINTRGPCHLMSFAKKCKKLKLFLQVSTAYVNGQRQG 277 (605)
T ss_pred EeeCCCcccCCCHHHHHHHHhcCCEEEECccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCCeEEEccCceeecCCCC
Confidence 9999985 4566677889999998431 144556554 5789999999988764211
Q ss_pred c---cccc----------------------c---------------------------------------hHHHHHHHHH
Q 021928 201 I---QALM----------------------K---------------------------------------GNARKLAEQD 216 (305)
Q Consensus 201 ~---~~~~----------------------~---------------------------------------~~~~~~~~~a 216 (305)
. ..|. . ..+...|..+
T Consensus 278 ~i~E~~y~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~d~~~~~~~~~~~~~~l~~~g~~~~~~~~~pNtYt~TK~lA 357 (605)
T PLN02503 278 RIMEKPFRMGDCIARELGISNSLPHNRPALDIEAEIKLALDSKRHGFQSNSFAQKMKDLGLERAKLYGWQDTYVFTKAMG 357 (605)
T ss_pred eeeeeecCcccccccccccccccccccccCCHHHHHHHHHHhhhcccchHHHHHHhhhcccchhhhCCCCChHHHHHHHH
Confidence 0 0000 0 0011223567
Q ss_pred HHHHHh--CCCCEEEEecCCccc-----CCCCC--------------cc---eeeecCCCCCCccCHHHHHHHHHHHhhC
Q 021928 217 ESMLMA--SGIPYTIIRTGVLQN-----TPGGK--------------QG---FQFEEGCAANGSLSKEDAAFICVEALES 272 (305)
Q Consensus 217 E~~l~~--~gi~~tilRPg~l~~-----~~~~~--------------~~---~~~~~~~~~~~~Is~~DvA~~iv~~l~~ 272 (305)
|+.+++ .+++++|+||+.+.. .++.. ++ ..+..++.....|++|.|+++++.++..
T Consensus 358 E~lV~~~~~~LPv~IvRPsiV~st~~eP~pGw~d~~~~~~p~~~~~g~G~lr~~~~~~~~~~DiVPVD~vvna~i~a~a~ 437 (605)
T PLN02503 358 EMVINSMRGDIPVVIIRPSVIESTWKDPFPGWMEGNRMMDPIVLYYGKGQLTGFLADPNGVLDVVPADMVVNATLAAMAK 437 (605)
T ss_pred HHHHHHhcCCCCEEEEcCCEecccccCCccccccCccccchhhhheeccceeEEEeCCCeeEeEEeecHHHHHHHHHHHh
Confidence 777775 479999999988632 11111 11 1112334456789999999999988432
Q ss_pred -C---CCCCcEEEEecC---CcCHHHHHHHHHHhh
Q 021928 273 -I---PQTGLIFEVVNG---EEKVSDWKKCFSRLM 300 (305)
Q Consensus 273 -~---~~~~~~~~v~~g---~~s~~d~~~~~~~l~ 300 (305)
. ....++||++++ +.++.++.+.+.+..
T Consensus 438 ~~~~~~~~~~vYn~ts~~~nP~t~~~~~~~~~~~~ 472 (605)
T PLN02503 438 HGGAAKPEINVYQIASSVVNPLVFQDLARLLYEHY 472 (605)
T ss_pred hhcccCCCCCEEEeCCCCCCCeEHHHHHHHHHHHH
Confidence 1 124689999976 347888888876543
|
|
| >PRK09134 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.59 E-value=7.5e-14 Score=125.11 Aligned_cols=188 Identities=16% Similarity=0.175 Sum_probs=119.2
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcc-hhhh------hcCCCcEEeecCCCCHHHHHHHhc-------C
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR-NAME------SFGTYVESMAGDASNKKFLKTALR-------G 162 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~-~~~~------~~~~~v~~v~~D~~d~~~~~~~~~-------~ 162 (305)
++|+++||||+|+||++++++|+++|++|+++.|... .... ..+..+.++.+|++|.+++.++++ .
T Consensus 8 ~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~ 87 (258)
T PRK09134 8 APRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAALGP 87 (258)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 4689999999999999999999999999988876532 2111 123468889999999888877664 4
Q ss_pred ccEEEECCcch--------------------------Hhhh----hhhcCCCEEEEEcccccccCCCCcccccchHHHHH
Q 021928 163 VRSIICPSEGF--------------------------ISNA----GSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKL 212 (305)
Q Consensus 163 ~d~Vi~~~~g~--------------------------~~~~----a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~~~ 212 (305)
+|+|||+++.. +... ....+-+++|+++|...+.+.+....|..++..
T Consensus 88 iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~~~~~~~p~~~~Y~~sK~a-- 165 (258)
T PRK09134 88 ITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQRVWNLNPDFLSYTLSKAA-- 165 (258)
T ss_pred CCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECchhhcCCCCCchHHHHHHHH--
Confidence 69999884310 1111 122334688888886655443333344433221
Q ss_pred HHHHHHHHH-h--CCCCEEEEecCCcccCCCCC-cceee-ecCCCCCCccCHHHHHHHHHHHhhCCCCCCcEEEEecCC
Q 021928 213 AEQDESMLM-A--SGIPYTIIRTGVLQNTPGGK-QGFQF-EEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVVNGE 286 (305)
Q Consensus 213 ~~~aE~~l~-~--~gi~~tilRPg~l~~~~~~~-~~~~~-~~~~~~~~~Is~~DvA~~iv~~l~~~~~~~~~~~v~~g~ 286 (305)
.....+.+. + .++.++.++||++....... ..+.. ..........+++|+|++++.+++.+...++.+.+.+|.
T Consensus 166 ~~~~~~~la~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~~~~~g~~~~i~gg~ 244 (258)
T PRK09134 166 LWTATRTLAQALAPRIRVNAIGPGPTLPSGRQSPEDFARQHAATPLGRGSTPEEIAAAVRYLLDAPSVTGQMIAVDGGQ 244 (258)
T ss_pred HHHHHHHHHHHhcCCcEEEEeecccccCCcccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHhcCCCcCCCEEEECCCe
Confidence 111111121 1 34899999999864322111 00000 001112345789999999999999777778999998775
|
|
| >PRK08324 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.59 E-value=3.9e-14 Score=144.12 Aligned_cols=190 Identities=17% Similarity=0.178 Sum_probs=127.1
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh---cC--CCcEEeecCCCCHHHHHHHhc-------Ccc
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FG--TYVESMAGDASNKKFLKTALR-------GVR 164 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~~--~~v~~v~~D~~d~~~~~~~~~-------~~d 164 (305)
.+++|+||||+|+||++++++|+++|++|++++|+++..... +. .++.++.+|++|.+++.++++ ++|
T Consensus 421 ~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~g~iD 500 (681)
T PRK08324 421 AGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAFGGVD 500 (681)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 458999999999999999999999999999999998653322 22 268899999999988877664 689
Q ss_pred EEEECCcc----h----------------------H----hhhhhhcCC-CEEEEEcccccccCCCCcccccchHHHHHH
Q 021928 165 SIICPSEG----F----------------------I----SNAGSLKGV-QHVILLSQLSVYRGSGGIQALMKGNARKLA 213 (305)
Q Consensus 165 ~Vi~~~~g----~----------------------~----~~~a~~~gv-~~~V~iSS~~~~~~~~~~~~~~~~~~~~~~ 213 (305)
+||++++. . + ....++.+. .+||++||..+..+..+...|...+.....
T Consensus 501 vvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~~~~~~~~~Y~asKaa~~~ 580 (681)
T PRK08324 501 IVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAVNPGPNFGAYGAAKAAELH 580 (681)
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccccCCCCCcHHHHHHHHHHHH
Confidence 99988441 0 1 112234444 799999998777655555555443321111
Q ss_pred --HHHHHHHHhCCCCEEEEecCCcc-cC-CCCCc---------ce-------eeecCCCCCCccCHHHHHHHHHHHhh--
Q 021928 214 --EQDESMLMASGIPYTIIRTGVLQ-NT-PGGKQ---------GF-------QFEEGCAANGSLSKEDAAFICVEALE-- 271 (305)
Q Consensus 214 --~~aE~~l~~~gi~~tilRPg~l~-~~-~~~~~---------~~-------~~~~~~~~~~~Is~~DvA~~iv~~l~-- 271 (305)
+.....+...++++++++|+.+. +. ..... +. .+..+.....+++.+|+|++++.++.
T Consensus 581 l~~~la~e~~~~gIrvn~v~Pg~v~~~t~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~v~~~DvA~a~~~l~s~~ 660 (681)
T PRK08324 581 LVRQLALELGPDGIRVNGVNPDAVVRGSGIWTGEWIEARAAAYGLSEEELEEFYRARNLLKREVTPEDVAEAVVFLASGL 660 (681)
T ss_pred HHHHHHHHhcccCeEEEEEeCceeecCCccccchhhhhhhhhccCChHHHHHHHHhcCCcCCccCHHHHHHHHHHHhCcc
Confidence 11111122467999999999974 21 11000 00 01122233567999999999999984
Q ss_pred CCCCCCcEEEEecCC
Q 021928 272 SIPQTGLIFEVVNGE 286 (305)
Q Consensus 272 ~~~~~~~~~~v~~g~ 286 (305)
.....++++++.+|.
T Consensus 661 ~~~~tG~~i~vdgG~ 675 (681)
T PRK08324 661 LSKTTGAIITVDGGN 675 (681)
T ss_pred ccCCcCCEEEECCCc
Confidence 344568999999875
|
|
| >PRK05693 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.59 E-value=1.4e-13 Score=124.50 Aligned_cols=178 Identities=13% Similarity=0.096 Sum_probs=115.1
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHh-------cCccEEEECC
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTAL-------RGVRSIICPS 170 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~-------~~~d~Vi~~~ 170 (305)
+|+++||||+|+||++++++|+++|++|++++|++++..+....+++++.+|++|.+++.+++ .++|+|||++
T Consensus 1 mk~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~a 80 (274)
T PRK05693 1 MPVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALAAAGFTAVQLDVNDGAALARLAEELEAEHGGLDVLINNA 80 (274)
T ss_pred CCEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECC
Confidence 479999999999999999999999999999999976654443445788999999988887665 3579999984
Q ss_pred cc----h----------------------Hhhhh---hhcCCCEEEEEcccccccCCCCcccccchHH--HHHHHHHHHH
Q 021928 171 EG----F----------------------ISNAG---SLKGVQHVILLSQLSVYRGSGGIQALMKGNA--RKLAEQDESM 219 (305)
Q Consensus 171 ~g----~----------------------~~~~a---~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~--~~~~~~aE~~ 219 (305)
+. . +...+ ...+..++|++||.....+......|...+. ..+.+.....
T Consensus 81 g~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~al~~~~~~l~~e 160 (274)
T PRK05693 81 GYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRSRGLVVNIGSVSGVLVTPFAGAYCASKAAVHALSDALRLE 160 (274)
T ss_pred CCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCEEEEECCccccCCCCCccHHHHHHHHHHHHHHHHHHH
Confidence 31 0 11111 1124468999999876655444444443322 1111222223
Q ss_pred HHhCCCCEEEEecCCcccCCCCCcc----eeeecCC---------------CCCCccCHHHHHHHHHHHhhCCCC
Q 021928 220 LMASGIPYTIIRTGVLQNTPGGKQG----FQFEEGC---------------AANGSLSKEDAAFICVEALESIPQ 275 (305)
Q Consensus 220 l~~~gi~~tilRPg~l~~~~~~~~~----~~~~~~~---------------~~~~~Is~~DvA~~iv~~l~~~~~ 275 (305)
+...++.++.++||.+......... ....... ......+.+|+|+.++.+++.+..
T Consensus 161 ~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~~~~~~~ 235 (274)
T PRK05693 161 LAPFGVQVMEVQPGAIASQFASNASREAEQLLAEQSPWWPLREHIQARARASQDNPTPAAEFARQLLAAVQQSPR 235 (274)
T ss_pred hhhhCeEEEEEecCccccccccccccchhhcCCCCCccHHHHHHHHHHHHhccCCCCCHHHHHHHHHHHHhCCCC
Confidence 4457999999999996433211100 0000000 011246899999999999986543
|
|
| >PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila | Back alignment and domain information |
|---|
Probab=99.59 E-value=1.5e-14 Score=129.55 Aligned_cols=137 Identities=20% Similarity=0.236 Sum_probs=81.1
Q ss_pred EEcCCChHHHHHHHHHHhCCC--eEEEEEcCcch--hhh-----------------hcCCCcEEeecCCCC------HHH
Q 021928 103 VTDGDSDIGQMVILSLIVKRT--RIKALVKDKRN--AME-----------------SFGTYVESMAGDASN------KKF 155 (305)
Q Consensus 103 VtGatG~iG~~l~~~L~~~g~--~V~~~~R~~~~--~~~-----------------~~~~~v~~v~~D~~d------~~~ 155 (305)
|||||||+|++++++|++++. +|++++|.... ..+ ....+++++.+|+++ .+.
T Consensus 1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~ 80 (249)
T PF07993_consen 1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED 80 (249)
T ss_dssp EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence 799999999999999999887 99999998643 111 015689999999997 356
Q ss_pred HHHHhcCccEEEECCcc-------------------hHhhhhhhcCCCEEEEEcccccccCCCC-c--------------
Q 021928 156 LKTALRGVRSIICPSEG-------------------FISNAGSLKGVQHVILLSQLSVYRGSGG-I-------------- 201 (305)
Q Consensus 156 ~~~~~~~~d~Vi~~~~g-------------------~~~~~a~~~gv~~~V~iSS~~~~~~~~~-~-------------- 201 (305)
+..+.+.+|+|||+++. .+.++|...+.++|+|+||..+...... .
T Consensus 81 ~~~L~~~v~~IiH~Aa~v~~~~~~~~~~~~NV~gt~~ll~la~~~~~~~~~~iSTa~v~~~~~~~~~~~~~~~~~~~~~~ 160 (249)
T PF07993_consen 81 YQELAEEVDVIIHCAASVNFNAPYSELRAVNVDGTRNLLRLAAQGKRKRFHYISTAYVAGSRPGTIEEKVYPEEEDDLDP 160 (249)
T ss_dssp HHHHHHH--EEEE--SS-SBS-S--EEHHHHHHHHHHHHHHHTSSS---EEEEEEGGGTTS-TTT--SSS-HHH--EEE-
T ss_pred hhccccccceeeecchhhhhcccchhhhhhHHHHHHHHHHHHHhccCcceEEeccccccCCCCCcccccccccccccchh
Confidence 67777899999998441 1556677666679999999433221110 0
Q ss_pred ccccchHHHHHHHHHHHHHHh----CCCCEEEEecCCcccCC
Q 021928 202 QALMKGNARKLAEQDESMLMA----SGIPYTIIRTGVLQNTP 239 (305)
Q Consensus 202 ~~~~~~~~~~~~~~aE~~l~~----~gi~~tilRPg~l~~~~ 239 (305)
..-....+..-|..+|.++++ .+++++|+|||.+.+.+
T Consensus 161 ~~~~~~gY~~SK~~aE~~l~~a~~~~g~p~~I~Rp~~i~g~~ 202 (249)
T PF07993_consen 161 PQGFPNGYEQSKWVAERLLREAAQRHGLPVTIYRPGIIVGDS 202 (249)
T ss_dssp -TTSEE-HHHHHHHHHHHHHHHHHHH---EEEEEE-EEE-SS
T ss_pred hccCCccHHHHHHHHHHHHHHHHhcCCceEEEEecCcccccC
Confidence 000011233446678888764 39999999999977643
|
A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A. |
| >TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase | Back alignment and domain information |
|---|
Probab=99.59 E-value=8.5e-14 Score=122.59 Aligned_cols=185 Identities=16% Similarity=0.168 Sum_probs=118.8
Q ss_pred EEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcch-hh---h---hcCCCcEEeecCCCCHHHHHHHhcC-------ccEE
Q 021928 101 VLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-AM---E---SFGTYVESMAGDASNKKFLKTALRG-------VRSI 166 (305)
Q Consensus 101 vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~-~~---~---~~~~~v~~v~~D~~d~~~~~~~~~~-------~d~V 166 (305)
|+|||++|+||++++++|+++|++|+++.|+... .. . ..+..+.++.+|++|.+++.+++.+ +|+|
T Consensus 1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 80 (239)
T TIGR01830 1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPIDIL 80 (239)
T ss_pred CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 6899999999999999999999999999987522 11 1 1123578999999999888777653 6999
Q ss_pred EECCcch--------------------------Hhhhh----hhcCCCEEEEEcccccccCCCCcccccchHH--HHHHH
Q 021928 167 ICPSEGF--------------------------ISNAG----SLKGVQHVILLSQLSVYRGSGGIQALMKGNA--RKLAE 214 (305)
Q Consensus 167 i~~~~g~--------------------------~~~~a----~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~--~~~~~ 214 (305)
||+++.. +...+ .+.+.++||++||...+.+......|...+. ..+.+
T Consensus 81 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~g~~~~~~y~~~k~a~~~~~~ 160 (239)
T TIGR01830 81 VNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVGLMGNAGQANYAASKAGVIGFTK 160 (239)
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCccccCCCCCCchhHHHHHHHHHHHH
Confidence 9873310 11112 2245679999999866554444444433322 11122
Q ss_pred HHHHHHHhCCCCEEEEecCCcccCCCCCcce----eeecCCCCCCccCHHHHHHHHHHHhhCC--CCCCcEEEEecC
Q 021928 215 QDESMLMASGIPYTIIRTGVLQNTPGGKQGF----QFEEGCAANGSLSKEDAAFICVEALESI--PQTGLIFEVVNG 285 (305)
Q Consensus 215 ~aE~~l~~~gi~~tilRPg~l~~~~~~~~~~----~~~~~~~~~~~Is~~DvA~~iv~~l~~~--~~~~~~~~v~~g 285 (305)
.....+...++.+++++||.+.......... ..........+.+++|+|++++.++... ...++.|++.+|
T Consensus 161 ~l~~~~~~~g~~~~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~~g 237 (239)
T TIGR01830 161 SLAKELASRNITVNAVAPGFIDTDMTDKLSEKVKKKILSQIPLGRFGTPEEVANAVAFLASDEASYITGQVIHVDGG 237 (239)
T ss_pred HHHHHHhhcCeEEEEEEECCCCChhhhhcChHHHHHHHhcCCcCCCcCHHHHHHHHHHHhCcccCCcCCCEEEeCCC
Confidence 2222334579999999999864322111000 0001112245678999999999998553 346789999765
|
This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis. |
| >PLN02253 xanthoxin dehydrogenase | Back alignment and domain information |
|---|
Probab=99.59 E-value=1.5e-13 Score=124.62 Aligned_cols=190 Identities=13% Similarity=0.083 Sum_probs=121.7
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh---hc--CCCcEEeecCCCCHHHHHHHhc-------Ccc
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SF--GTYVESMAGDASNKKFLKTALR-------GVR 164 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~---~~--~~~v~~v~~D~~d~~~~~~~~~-------~~d 164 (305)
.+|+++||||+|+||++++++|+++|++|+++.|+.+...+ .. ..++.++.+|++|.+++.++++ .+|
T Consensus 17 ~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g~id 96 (280)
T PLN02253 17 LGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDKFGTLD 96 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHHhCCCC
Confidence 45899999999999999999999999999999987654321 11 2358899999999988887776 589
Q ss_pred EEEECCcc------h----------------------Hhhhh----hhcCCCEEEEEcccccccCCCCcccccchHHH--
Q 021928 165 SIICPSEG------F----------------------ISNAG----SLKGVQHVILLSQLSVYRGSGGIQALMKGNAR-- 210 (305)
Q Consensus 165 ~Vi~~~~g------~----------------------~~~~a----~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~-- 210 (305)
++||+++. . +..++ .+.+-.++|++||.....+......|..++..
T Consensus 97 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~a~~ 176 (280)
T PLN02253 97 IMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASAIGGLGPHAYTGSKHAVL 176 (280)
T ss_pred EEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChhhcccCCCCcccHHHHHHHH
Confidence 99987321 0 00111 12234589999887665443334445443321
Q ss_pred HHHHHHHHHHHhCCCCEEEEecCCcccCCC-----CCc---cee-----e-ecCCCC-CCccCHHHHHHHHHHHhhCCC-
Q 021928 211 KLAEQDESMLMASGIPYTIIRTGVLQNTPG-----GKQ---GFQ-----F-EEGCAA-NGSLSKEDAAFICVEALESIP- 274 (305)
Q Consensus 211 ~~~~~aE~~l~~~gi~~tilRPg~l~~~~~-----~~~---~~~-----~-~~~~~~-~~~Is~~DvA~~iv~~l~~~~- 274 (305)
.+.+.....+...++.++.++||.+..... ... ... . ...... ...++++|+|.+++.++....
T Consensus 177 ~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~dva~~~~~l~s~~~~ 256 (280)
T PLN02253 177 GLTRSVAAELGKHGIRVNCVSPYAVPTALALAHLPEDERTEDALAGFRAFAGKNANLKGVELTVDDVANAVLFLASDEAR 256 (280)
T ss_pred HHHHHHHHHhhhcCeEEEEEeeCcccccccccccccccchhhhhhhhHHHhhcCCCCcCCCCCHHHHHHHHHhhcCcccc
Confidence 111222223334689999999999643211 000 000 0 000111 224789999999999987543
Q ss_pred -CCCcEEEEecCC
Q 021928 275 -QTGLIFEVVNGE 286 (305)
Q Consensus 275 -~~~~~~~v~~g~ 286 (305)
..++.+.+.+|.
T Consensus 257 ~i~G~~i~vdgG~ 269 (280)
T PLN02253 257 YISGLNLMIDGGF 269 (280)
T ss_pred cccCcEEEECCch
Confidence 357889998775
|
|
| >PRK07062 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=8.7e-14 Score=125.11 Aligned_cols=189 Identities=16% Similarity=0.172 Sum_probs=123.8
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh-------c-CCCcEEeecCCCCHHHHHHHhc-------
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------F-GTYVESMAGDASNKKFLKTALR------- 161 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~-------~-~~~v~~v~~D~~d~~~~~~~~~------- 161 (305)
.+++++||||+++||++++++|+++|++|+++.|++++..+. . +.++.++.+|++|.+++.++++
T Consensus 7 ~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 86 (265)
T PRK07062 7 EGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEARFG 86 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHhcC
Confidence 458999999999999999999999999999999987653221 1 1257789999999888766543
Q ss_pred CccEEEECCcch------------------------------HhhhhhhcCCCEEEEEcccccccCCCCcccccchHH--
Q 021928 162 GVRSIICPSEGF------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA-- 209 (305)
Q Consensus 162 ~~d~Vi~~~~g~------------------------------~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~-- 209 (305)
.+|.+|++++.. +...+++.+..+||++||.....+......|...++
T Consensus 87 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~asKaal 166 (265)
T PRK07062 87 GVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASAAASIVCVNSLLALQPEPHMVATSAARAGL 166 (265)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCcEEEEeccccccCCCCCchHhHHHHHHH
Confidence 579999884310 111233345679999999887765544444443322
Q ss_pred HHHHHHHHHHHHhCCCCEEEEecCCcccCCCCC-------cceeee---------cCCCCCCccCHHHHHHHHHHHhhCC
Q 021928 210 RKLAEQDESMLMASGIPYTIIRTGVLQNTPGGK-------QGFQFE---------EGCAANGSLSKEDAAFICVEALESI 273 (305)
Q Consensus 210 ~~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~-------~~~~~~---------~~~~~~~~Is~~DvA~~iv~~l~~~ 273 (305)
..+.+.....+...++.++.++||++....... ....+. .......+..++|+|++++.++...
T Consensus 167 ~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~~va~~~~~L~s~~ 246 (265)
T PRK07062 167 LNLVKSLATELAPKGVRVNSILLGLVESGQWRRRYEARADPGQSWEAWTAALARKKGIPLGRLGRPDEAARALFFLASPL 246 (265)
T ss_pred HHHHHHHHHHhhhcCeEEEEEecCccccchhhhHHHHhhccCCChHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHHhCch
Confidence 112222223345679999999999964322100 000000 0111223568899999999988643
Q ss_pred C--CCCcEEEEecC
Q 021928 274 P--QTGLIFEVVNG 285 (305)
Q Consensus 274 ~--~~~~~~~v~~g 285 (305)
. ..|+++.+.+|
T Consensus 247 ~~~~tG~~i~vdgg 260 (265)
T PRK07062 247 SSYTTGSHIDVSGG 260 (265)
T ss_pred hcccccceEEEcCc
Confidence 3 46788888765
|
|
| >PRK08589 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.58 E-value=1.4e-13 Score=124.67 Aligned_cols=188 Identities=15% Similarity=0.064 Sum_probs=122.3
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh------hcCCCcEEeecCCCCHHHHHHHhc-------Cc
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTALR-------GV 163 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~------~~~~~v~~v~~D~~d~~~~~~~~~-------~~ 163 (305)
.+++++||||+++||++++++|+++|++|+++.|+ +...+ ..+.++.++.+|++|.+++.++++ .+
T Consensus 5 ~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i 83 (272)
T PRK08589 5 ENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFGRV 83 (272)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcCCc
Confidence 35899999999999999999999999999999998 43221 123458899999999888776554 46
Q ss_pred cEEEECCcc-----h--------------------------HhhhhhhcCCCEEEEEcccccccCCCCcccccchHH--H
Q 021928 164 RSIICPSEG-----F--------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA--R 210 (305)
Q Consensus 164 d~Vi~~~~g-----~--------------------------~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~--~ 210 (305)
|++|++++. . +....++.+ .+||++||...+.+......|..+++ .
T Consensus 84 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~asKaal~ 162 (272)
T PRK08589 84 DVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQG-GSIINTSSFSGQAADLYRSGYNAAKGAVI 162 (272)
T ss_pred CEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEeCchhhcCCCCCCchHHHHHHHHH
Confidence 999987321 0 011122334 69999999887765544445544332 1
Q ss_pred HHHHHHHHHHHhCCCCEEEEecCCcccCCCC----Ccc----eeee----cCCCCCCccCHHHHHHHHHHHhhCCC--CC
Q 021928 211 KLAEQDESMLMASGIPYTIIRTGVLQNTPGG----KQG----FQFE----EGCAANGSLSKEDAAFICVEALESIP--QT 276 (305)
Q Consensus 211 ~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~----~~~----~~~~----~~~~~~~~Is~~DvA~~iv~~l~~~~--~~ 276 (305)
.+.+.....+...++.++.|.||.+...... ... ..+. .......+.+++|+|++++.++.++. ..
T Consensus 163 ~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~ 242 (272)
T PRK08589 163 NFTKSIAIEYGRDGIRANAIAPGTIETPLVDKLTGTSEDEAGKTFRENQKWMTPLGRLGKPEEVAKLVVFLASDDSSFIT 242 (272)
T ss_pred HHHHHHHHHhhhcCeEEEEEecCcccCchhhhhcccchhhHHHHHhhhhhccCCCCCCcCHHHHHHHHHHHcCchhcCcC
Confidence 1222222234457899999999996432110 000 0000 00112235689999999999987543 46
Q ss_pred CcEEEEecCC
Q 021928 277 GLIFEVVNGE 286 (305)
Q Consensus 277 ~~~~~v~~g~ 286 (305)
++.+.+.+|.
T Consensus 243 G~~i~vdgg~ 252 (272)
T PRK08589 243 GETIRIDGGV 252 (272)
T ss_pred CCEEEECCCc
Confidence 7888887764
|
|
| >PRK06101 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=1.1e-13 Score=122.99 Aligned_cols=170 Identities=18% Similarity=0.111 Sum_probs=113.4
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhc--CCCcEEeecCCCCHHHHHHHhcCc----cEEEECCc
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF--GTYVESMAGDASNKKFLKTALRGV----RSIICPSE 171 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~--~~~v~~v~~D~~d~~~~~~~~~~~----d~Vi~~~~ 171 (305)
+++++||||+|+||++++++|+++|++|++++|++++..+.. ..++.++.+|++|.+++.++++.+ |.++++++
T Consensus 1 ~~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~d~~i~~ag 80 (240)
T PRK06101 1 MTAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQSANIFTLAFDVTDHPGTKAALSQLPFIPELWIFNAG 80 (240)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCCCeEEEeeCCCHHHHHHHHHhcccCCCEEEEcCc
Confidence 378999999999999999999999999999999876644332 235889999999999999888753 66765532
Q ss_pred ch--------------------------Hhhhhhh--cCCCEEEEEcccccccCCCCcccccchHH--HHHHHHHHHHHH
Q 021928 172 GF--------------------------ISNAGSL--KGVQHVILLSQLSVYRGSGGIQALMKGNA--RKLAEQDESMLM 221 (305)
Q Consensus 172 g~--------------------------~~~~a~~--~gv~~~V~iSS~~~~~~~~~~~~~~~~~~--~~~~~~aE~~l~ 221 (305)
.. +..++.. .+-+++|++||.....+......|...+. ..+.+.....+.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~l~~e~~ 160 (240)
T PRK06101 81 DCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCGHRVVIVGSIASELALPRAEAYGASKAAVAYFARTLQLDLR 160 (240)
T ss_pred ccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCeEEEEechhhccCCCCCchhhHHHHHHHHHHHHHHHHHH
Confidence 10 1111111 12357999988766555444445544332 111122222345
Q ss_pred hCCCCEEEEecCCcccCCCCCcceeeecCCCCCCccCHHHHHHHHHHHhhCC
Q 021928 222 ASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESI 273 (305)
Q Consensus 222 ~~gi~~tilRPg~l~~~~~~~~~~~~~~~~~~~~~Is~~DvA~~iv~~l~~~ 273 (305)
..+++++.++||++......... . .....++++|+|+.++..++..
T Consensus 161 ~~gi~v~~v~pg~i~t~~~~~~~--~----~~~~~~~~~~~a~~i~~~i~~~ 206 (240)
T PRK06101 161 PKGIEVVTVFPGFVATPLTDKNT--F----AMPMIITVEQASQEIRAQLARG 206 (240)
T ss_pred hcCceEEEEeCCcCCCCCcCCCC--C----CCCcccCHHHHHHHHHHHHhcC
Confidence 67999999999997543221110 0 1112479999999999999864
|
|
| >PRK05867 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=1.6e-13 Score=122.68 Aligned_cols=190 Identities=15% Similarity=0.124 Sum_probs=122.1
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh------cCCCcEEeecCCCCHHHHHHHhc-------Cc
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GV 163 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~~~v~~v~~D~~d~~~~~~~~~-------~~ 163 (305)
.+++++||||+|+||++++++|+++|++|+++.|+.++..+. .+.++.++.+|++|.+++.++++ .+
T Consensus 8 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i 87 (253)
T PRK05867 8 HGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAELGGI 87 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 458999999999999999999999999999999987653221 13467889999999988877654 67
Q ss_pred cEEEECCcch--------------------------Hhhh----hhhcC-CCEEEEEcccccccCC--CCcccccchHH-
Q 021928 164 RSIICPSEGF--------------------------ISNA----GSLKG-VQHVILLSQLSVYRGS--GGIQALMKGNA- 209 (305)
Q Consensus 164 d~Vi~~~~g~--------------------------~~~~----a~~~g-v~~~V~iSS~~~~~~~--~~~~~~~~~~~- 209 (305)
|++||+++.. +..+ ..+.+ -.++|++||....... .....|...+.
T Consensus 88 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~~Y~asKaa 167 (253)
T PRK05867 88 DIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHIINVPQQVSHYCASKAA 167 (253)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhcCCCCCCCccchHHHHHH
Confidence 9999884310 0111 11222 2579999887654321 12234443322
Q ss_pred -HHHHHHHHHHHHhCCCCEEEEecCCcccCCCCC-cce--eeecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEEEEe
Q 021928 210 -RKLAEQDESMLMASGIPYTIIRTGVLQNTPGGK-QGF--QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVV 283 (305)
Q Consensus 210 -~~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~-~~~--~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~v~ 283 (305)
..+.+.....+...+++++.++||.+....... ... .+........+.+++|+|++++.++.... ..|+.+.+.
T Consensus 168 l~~~~~~la~e~~~~gI~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~r~~~p~~va~~~~~L~s~~~~~~tG~~i~vd 247 (253)
T PRK05867 168 VIHLTKAMAVELAPHKIRVNSVSPGYILTELVEPYTEYQPLWEPKIPLGRLGRPEELAGLYLYLASEASSYMTGSDIVID 247 (253)
T ss_pred HHHHHHHHHHHHhHhCeEEEEeecCCCCCcccccchHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCcccCCcCCCeEEEC
Confidence 112222223345579999999999974332110 000 00011122446789999999999997543 467888888
Q ss_pred cCC
Q 021928 284 NGE 286 (305)
Q Consensus 284 ~g~ 286 (305)
+|.
T Consensus 248 gG~ 250 (253)
T PRK05867 248 GGY 250 (253)
T ss_pred CCc
Confidence 763
|
|
| >PRK09072 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=7.4e-14 Score=125.52 Aligned_cols=176 Identities=14% Similarity=0.121 Sum_probs=114.7
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh-----cCCCcEEeecCCCCHHHHHHHhc------CccE
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-----FGTYVESMAGDASNKKFLKTALR------GVRS 165 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~-----~~~~v~~v~~D~~d~~~~~~~~~------~~d~ 165 (305)
++++|+||||+|+||++++++|+++|++|++++|+++...+. .+.++.++.+|+.|.+++.++++ .+|+
T Consensus 4 ~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~id~ 83 (263)
T PRK09072 4 KDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARAREMGGINV 83 (263)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHhcCCCCE
Confidence 458999999999999999999999999999999987653322 23468899999999888776654 5799
Q ss_pred EEECCcch--------------------------Hhhh----hhhcCCCEEEEEcccccccCCCCcccccchHHH--HHH
Q 021928 166 IICPSEGF--------------------------ISNA----GSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--KLA 213 (305)
Q Consensus 166 Vi~~~~g~--------------------------~~~~----a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~--~~~ 213 (305)
+|++++.. +... ..+.+..++|++||.....+..+...|...+.. .+.
T Consensus 84 lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~ 163 (263)
T PRK09072 84 LINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGSTFGSIGYPGYASYCASKFALRGFS 163 (263)
T ss_pred EEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecChhhCcCCCCccHHHHHHHHHHHHH
Confidence 99884310 0111 223445789999887665544444444433321 111
Q ss_pred HHHHHHHHhCCCCEEEEecCCcccCCCCCcceeeecCCCCCCccCHHHHHHHHHHHhhCC
Q 021928 214 EQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESI 273 (305)
Q Consensus 214 ~~aE~~l~~~gi~~tilRPg~l~~~~~~~~~~~~~~~~~~~~~Is~~DvA~~iv~~l~~~ 273 (305)
+.....+...++.++.+.||++............ .........+++|+|+.++.++++.
T Consensus 164 ~~l~~~~~~~~i~v~~v~Pg~~~t~~~~~~~~~~-~~~~~~~~~~~~~va~~i~~~~~~~ 222 (263)
T PRK09072 164 EALRRELADTGVRVLYLAPRATRTAMNSEAVQAL-NRALGNAMDDPEDVAAAVLQAIEKE 222 (263)
T ss_pred HHHHHHhcccCcEEEEEecCcccccchhhhcccc-cccccCCCCCHHHHHHHHHHHHhCC
Confidence 2222223357899999999986433211100000 0111124678999999999999865
|
|
| >PRK06947 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=1.2e-13 Score=122.82 Aligned_cols=189 Identities=16% Similarity=0.155 Sum_probs=116.4
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEE-cCcchhhh------hcCCCcEEeecCCCCHHHHHHHhc-------C
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALV-KDKRNAME------SFGTYVESMAGDASNKKFLKTALR-------G 162 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~-R~~~~~~~------~~~~~v~~v~~D~~d~~~~~~~~~-------~ 162 (305)
|+|+|+||||+|+||+.++++|+++|++|+++. |++++... ..+.++.++.+|+.|.+++.++++ .
T Consensus 1 m~k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 80 (248)
T PRK06947 1 MRKVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAFGR 80 (248)
T ss_pred CCcEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhcCC
Confidence 368999999999999999999999999998765 44433221 123468899999999888766553 5
Q ss_pred ccEEEECCcc-----h----------------------Hh-hhhhhcC------CCEEEEEcccccccCCC-Ccccccch
Q 021928 163 VRSIICPSEG-----F----------------------IS-NAGSLKG------VQHVILLSQLSVYRGSG-GIQALMKG 207 (305)
Q Consensus 163 ~d~Vi~~~~g-----~----------------------~~-~~a~~~g------v~~~V~iSS~~~~~~~~-~~~~~~~~ 207 (305)
+|++||+++. . +. .++.... -.+||++||.....+.. ....|...
T Consensus 81 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~~Y~~s 160 (248)
T PRK06947 81 LDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRLGSPNEYVDYAGS 160 (248)
T ss_pred CCEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcCCCCCCCcccHhh
Confidence 7999988431 0 00 1111111 23699999876654322 22344443
Q ss_pred HHH--HHHHHHHHHHHhCCCCEEEEecCCcccCCCC--Ccce---eeecCCCCCCccCHHHHHHHHHHHhhCCC--CCCc
Q 021928 208 NAR--KLAEQDESMLMASGIPYTIIRTGVLQNTPGG--KQGF---QFEEGCAANGSLSKEDAAFICVEALESIP--QTGL 278 (305)
Q Consensus 208 ~~~--~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~--~~~~---~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~ 278 (305)
+.. .+.+.....+...++.+++++||++...... +... ............+++|+|+.++.++.++. ..|+
T Consensus 161 K~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~e~va~~~~~l~~~~~~~~~G~ 240 (248)
T PRK06947 161 KGAVDTLTLGLAKELGPHGVRVNAVRPGLIETEIHASGGQPGRAARLGAQTPLGRAGEADEVAETIVWLLSDAASYVTGA 240 (248)
T ss_pred HHHHHHHHHHHHHHhhhhCcEEEEEeccCcccccccccCCHHHHHHHhhcCCCCCCcCHHHHHHHHHHHcCccccCcCCc
Confidence 321 1111111223446899999999996533211 1100 00011111235688999999999998764 4677
Q ss_pred EEEEecC
Q 021928 279 IFEVVNG 285 (305)
Q Consensus 279 ~~~v~~g 285 (305)
.+.+.+|
T Consensus 241 ~~~~~gg 247 (248)
T PRK06947 241 LLDVGGG 247 (248)
T ss_pred eEeeCCC
Confidence 7777654
|
|
| >PRK07035 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=1.2e-13 Score=123.16 Aligned_cols=190 Identities=10% Similarity=0.051 Sum_probs=123.8
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh------cCCCcEEeecCCCCHHHHHHHhc-------Cc
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GV 163 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~~~v~~v~~D~~d~~~~~~~~~-------~~ 163 (305)
+.++|+||||+|+||++++++|+++|++|+++.|+.+..... .+..+.++.+|+.|.+++..+++ .+
T Consensus 7 ~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 86 (252)
T PRK07035 7 TGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERHGRL 86 (252)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 458999999999999999999999999999999987543221 13357789999999888776554 47
Q ss_pred cEEEECCcch-------------------------------HhhhhhhcCCCEEEEEcccccccCCCCcccccchHHH--
Q 021928 164 RSIICPSEGF-------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR-- 210 (305)
Q Consensus 164 d~Vi~~~~g~-------------------------------~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~-- 210 (305)
|++||+++.. ....+++.+.+++|++||.....+..+...|..++..
T Consensus 87 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~al~ 166 (252)
T PRK07035 87 DILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVASVNGVSPGDFQGIYSITKAAVI 166 (252)
T ss_pred CEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEEEECchhhcCCCCCCcchHHHHHHHH
Confidence 9999874310 0112344567899999998776554444445433221
Q ss_pred HHHHHHHHHHHhCCCCEEEEecCCcccCCCCC---cceee---ecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEEEE
Q 021928 211 KLAEQDESMLMASGIPYTIIRTGVLQNTPGGK---QGFQF---EEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEV 282 (305)
Q Consensus 211 ~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~---~~~~~---~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~v 282 (305)
.+.+.....+...+++++.|.||.+....... ....+ ...........++|+|+.+..++.+.. ..++++.+
T Consensus 167 ~~~~~l~~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~ 246 (252)
T PRK07035 167 SMTKAFAKECAPFGIRVNALLPGLTDTKFASALFKNDAILKQALAHIPLRRHAEPSEMAGAVLYLASDASSYTTGECLNV 246 (252)
T ss_pred HHHHHHHHHHhhcCEEEEEEeeccccCcccccccCCHHHHHHHHccCCCCCcCCHHHHHHHHHHHhCccccCccCCEEEe
Confidence 11111112233468999999999964332110 00000 001112346789999999999997654 36788888
Q ss_pred ecCC
Q 021928 283 VNGE 286 (305)
Q Consensus 283 ~~g~ 286 (305)
.+|.
T Consensus 247 dgg~ 250 (252)
T PRK07035 247 DGGY 250 (252)
T ss_pred CCCc
Confidence 7653
|
|
| >PRK08340 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=9.6e-14 Score=124.59 Aligned_cols=188 Identities=18% Similarity=0.130 Sum_probs=121.7
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh---c--CCCcEEeecCCCCHHHHHHHhc-------CccEE
Q 021928 99 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---F--GTYVESMAGDASNKKFLKTALR-------GVRSI 166 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~--~~~v~~v~~D~~d~~~~~~~~~-------~~d~V 166 (305)
|+++||||+|+||++++++|+++|++|+++.|++++..+. + ..++.++.+|++|.++++++++ .+|++
T Consensus 1 m~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~l 80 (259)
T PRK08340 1 MNVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGIDAL 80 (259)
T ss_pred CeEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCEE
Confidence 5899999999999999999999999999999987653221 1 1257889999999888877663 57999
Q ss_pred EECCcc-------h-------H--------------hh-----hhhhcCCCEEEEEcccccccCCCCcccccchHH--HH
Q 021928 167 ICPSEG-------F-------I--------------SN-----AGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA--RK 211 (305)
Q Consensus 167 i~~~~g-------~-------~--------------~~-----~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~--~~ 211 (305)
|++++. . + .. ..++.+..+||++||..+..+.+....|...+. ..
T Consensus 81 i~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sKaa~~~ 160 (259)
T PRK08340 81 VWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSVKEPMPPLVLADVTRAGLVQ 160 (259)
T ss_pred EECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCcccCCCCCCchHHHHHHHHHHH
Confidence 987431 0 0 00 011234568999999887665444444433221 11
Q ss_pred HHHHHHHHHHhCCCCEEEEecCCcccCCCCC--------ccee--------eecCCCCCCccCHHHHHHHHHHHhhCCC-
Q 021928 212 LAEQDESMLMASGIPYTIIRTGVLQNTPGGK--------QGFQ--------FEEGCAANGSLSKEDAAFICVEALESIP- 274 (305)
Q Consensus 212 ~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~--------~~~~--------~~~~~~~~~~Is~~DvA~~iv~~l~~~~- 274 (305)
+.+.....+...++.+..|.||++....... .... +........+..++|||++++.++..+.
T Consensus 161 ~~~~la~e~~~~gI~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~~~fL~s~~~~ 240 (259)
T PRK08340 161 LAKGVSRTYGGKGIRAYTVLLGSFDTPGARENLARIAEERGVSFEETWEREVLERTPLKRTGRWEELGSLIAFLLSENAE 240 (259)
T ss_pred HHHHHHHHhCCCCEEEEEeccCcccCccHHHHHHhhhhccCCchHHHHHHHHhccCCccCCCCHHHHHHHHHHHcCcccc
Confidence 2222223344578999999999964332100 0000 0001112345688999999999997543
Q ss_pred -CCCcEEEEecCC
Q 021928 275 -QTGLIFEVVNGE 286 (305)
Q Consensus 275 -~~~~~~~v~~g~ 286 (305)
..|+++.+.+|.
T Consensus 241 ~itG~~i~vdgg~ 253 (259)
T PRK08340 241 YMLGSTIVFDGAM 253 (259)
T ss_pred cccCceEeecCCc
Confidence 367888777663
|
|
| >PRK09242 tropinone reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=2.2e-13 Score=121.93 Aligned_cols=190 Identities=13% Similarity=0.116 Sum_probs=123.6
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh-------c-CCCcEEeecCCCCHHHHHHHhc-------
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------F-GTYVESMAGDASNKKFLKTALR------- 161 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~-------~-~~~v~~v~~D~~d~~~~~~~~~------- 161 (305)
.+|+++||||+|+||++++++|+++|++|++++|+.+...+. . +.++.++.+|+++.+++..+++
T Consensus 8 ~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 87 (257)
T PRK09242 8 DGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDHWD 87 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 468999999999999999999999999999999987653221 1 2367889999999877665554
Q ss_pred CccEEEECCcch--------------------------Hhh----hhhhcCCCEEEEEcccccccCCCCcccccchHH--
Q 021928 162 GVRSIICPSEGF--------------------------ISN----AGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA-- 209 (305)
Q Consensus 162 ~~d~Vi~~~~g~--------------------------~~~----~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~-- 209 (305)
.+|.||++++.. +.+ ..++.+.++||++||...+.+......|...+.
T Consensus 88 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~sK~a~ 167 (257)
T PRK09242 88 GLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHASSAIVNIGSVSGLTHVRSGAPYGMTKAAL 167 (257)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCceEEEECccccCCCCCCCcchHHHHHHH
Confidence 579999884310 111 123455679999999887766555555544332
Q ss_pred HHHHHHHHHHHHhCCCCEEEEecCCcccCCCCC----ccee--eecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEEE
Q 021928 210 RKLAEQDESMLMASGIPYTIIRTGVLQNTPGGK----QGFQ--FEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFE 281 (305)
Q Consensus 210 ~~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~----~~~~--~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~ 281 (305)
..+.+.....+...+++++.++||++....... .... +.......-+.+.+|++.++..++.... ..++.+.
T Consensus 168 ~~~~~~la~e~~~~~i~v~~i~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~i~ 247 (257)
T PRK09242 168 LQMTRNLAVEWAEDGIRVNAVAPWYIRTPLTSGPLSDPDYYEQVIERTPMRRVGEPEEVAAAVAFLCMPAASYITGQCIA 247 (257)
T ss_pred HHHHHHHHHHHHHhCeEEEEEEECCCCCcccccccCChHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcccccccCCEEE
Confidence 111111122244578999999999964332110 0000 0011111234578999999999986543 3578888
Q ss_pred EecCC
Q 021928 282 VVNGE 286 (305)
Q Consensus 282 v~~g~ 286 (305)
+.+|.
T Consensus 248 ~~gg~ 252 (257)
T PRK09242 248 VDGGF 252 (257)
T ss_pred ECCCe
Confidence 87654
|
|
| >PRK06483 dihydromonapterin reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=1.2e-13 Score=122.14 Aligned_cols=189 Identities=15% Similarity=0.183 Sum_probs=118.7
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhc-CCCcEEeecCCCCHHHHHHHhc-------CccEEEE
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF-GTYVESMAGDASNKKFLKTALR-------GVRSIIC 168 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-~~~v~~v~~D~~d~~~~~~~~~-------~~d~Vi~ 168 (305)
++|+++||||+|+||++++++|+++|++|+++.|+++...+.. ..++.++.+|+.|.+++.++++ .+|++||
T Consensus 1 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~ 80 (236)
T PRK06483 1 MPAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDGLRQAGAQCIQADFSTNAGIMAFIDELKQHTDGLRAIIH 80 (236)
T ss_pred CCceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCEEEEcCCCCHHHHHHHHHHHHhhCCCccEEEE
Confidence 3589999999999999999999999999999999875532221 1247889999999888766553 4799998
Q ss_pred CCcch------------------------------HhhhhhhcC--CCEEEEEcccccccCCCCcccccchHHH--HHHH
Q 021928 169 PSEGF------------------------------ISNAGSLKG--VQHVILLSQLSVYRGSGGIQALMKGNAR--KLAE 214 (305)
Q Consensus 169 ~~~g~------------------------------~~~~a~~~g--v~~~V~iSS~~~~~~~~~~~~~~~~~~~--~~~~ 214 (305)
+++.. +....++.+ ..++|++||.....+......|..++.. .+.+
T Consensus 81 ~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~asKaal~~l~~ 160 (236)
T PRK06483 81 NASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVEKGSDKHIAYAASKAALDNMTL 160 (236)
T ss_pred CCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhccCCCCCccHHHHHHHHHHHHH
Confidence 74310 011122233 4689999988765544444445443321 1111
Q ss_pred HHHHHHHhCCCCEEEEecCCcccCCCCCcce--eeecCCCCCCccCHHHHHHHHHHHhhCCCCCCcEEEEecCC
Q 021928 215 QDESMLMASGIPYTIIRTGVLQNTPGGKQGF--QFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVVNGE 286 (305)
Q Consensus 215 ~aE~~l~~~gi~~tilRPg~l~~~~~~~~~~--~~~~~~~~~~~Is~~DvA~~iv~~l~~~~~~~~~~~v~~g~ 286 (305)
.....+. .++.+..|+||++.......... .........-...++|+|+++..++...-..|+++.+.+|.
T Consensus 161 ~~a~e~~-~~irvn~v~Pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~G~~i~vdgg~ 233 (236)
T PRK06483 161 SFAAKLA-PEVKVNSIAPALILFNEGDDAAYRQKALAKSLLKIEPGEEEIIDLVDYLLTSCYVTGRSLPVDGGR 233 (236)
T ss_pred HHHHHHC-CCcEEEEEccCceecCCCCCHHHHHHHhccCccccCCCHHHHHHHHHHHhcCCCcCCcEEEeCccc
Confidence 1111122 35999999999953221111100 00001111224578999999999997555678888887663
|
|
| >PRK09135 pteridine reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=2.4e-13 Score=120.40 Aligned_cols=186 Identities=15% Similarity=0.143 Sum_probs=116.6
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchh-hh-------hcCCCcEEeecCCCCHHHHHHHhc-------
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-ME-------SFGTYVESMAGDASNKKFLKTALR------- 161 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~-~~-------~~~~~v~~v~~D~~d~~~~~~~~~------- 161 (305)
+.++|+||||+|+||++++++|+++|++|++++|+..+. .. ..+..+.++.+|++|.+++.++++
T Consensus 5 ~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 84 (249)
T PRK09135 5 SAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAAFG 84 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 348999999999999999999999999999999874331 11 112357889999999998887776
Q ss_pred CccEEEECCcch--------------------------Hhhhhhh---cCCCEEEEEcccccccCCCCcccccchHHHHH
Q 021928 162 GVRSIICPSEGF--------------------------ISNAGSL---KGVQHVILLSQLSVYRGSGGIQALMKGNARKL 212 (305)
Q Consensus 162 ~~d~Vi~~~~g~--------------------------~~~~a~~---~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~~~ 212 (305)
++|+|||+++.. +.+++.. ..-..++.+++.....+..+...|...+
T Consensus 85 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK---- 160 (249)
T PRK09135 85 RLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQRGAIVNITDIHAERPLKGYPVYCAAK---- 160 (249)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCCeEEEEEeChhhcCCCCCchhHHHHH----
Confidence 469999984310 1112211 1124677777655544444444443322
Q ss_pred HHHHHHHHH----h--CCCCEEEEecCCcccCCCCCc--cee---eecCCCCCCccCHHHHHHHHHHHhhCCC-CCCcEE
Q 021928 213 AEQDESMLM----A--SGIPYTIIRTGVLQNTPGGKQ--GFQ---FEEGCAANGSLSKEDAAFICVEALESIP-QTGLIF 280 (305)
Q Consensus 213 ~~~aE~~l~----~--~gi~~tilRPg~l~~~~~~~~--~~~---~~~~~~~~~~Is~~DvA~~iv~~l~~~~-~~~~~~ 280 (305)
..+|.+++ + .+++++++|||++........ ... ...........+++|+|+++..++.+.. ..|++|
T Consensus 161 -~~~~~~~~~l~~~~~~~i~~~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~~~~~~g~~~ 239 (249)
T PRK09135 161 -AALEMLTRSLALELAPEVRVNAVAPGAILWPEDGNSFDEEARQAILARTPLKRIGTPEDIAEAVRFLLADASFITGQIL 239 (249)
T ss_pred -HHHHHHHHHHHHHHCCCCeEEEEEeccccCccccccCCHHHHHHHHhcCCcCCCcCHHHHHHHHHHHcCccccccCcEE
Confidence 22333322 1 369999999998653322110 000 0011112234578999999977765433 468999
Q ss_pred EEecCCc
Q 021928 281 EVVNGEE 287 (305)
Q Consensus 281 ~v~~g~~ 287 (305)
++.+|..
T Consensus 240 ~i~~g~~ 246 (249)
T PRK09135 240 AVDGGRS 246 (249)
T ss_pred EECCCee
Confidence 9998763
|
|
| >PRK06949 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=1.3e-13 Score=123.26 Aligned_cols=190 Identities=13% Similarity=0.073 Sum_probs=121.9
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh------cCCCcEEeecCCCCHHHHHHHhc-------C
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------G 162 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~~~v~~v~~D~~d~~~~~~~~~-------~ 162 (305)
..+++|+||||+|+||++++++|+++|++|+++.|++++..+. ...++.++.+|+++.+++.++++ .
T Consensus 7 ~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 86 (258)
T PRK06949 7 LEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEAGT 86 (258)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Confidence 4569999999999999999999999999999999987663221 13467899999999988887765 5
Q ss_pred ccEEEECCcch--------------------------Hhh----hhhhcC--------CCEEEEEcccccccCCCCcccc
Q 021928 163 VRSIICPSEGF--------------------------ISN----AGSLKG--------VQHVILLSQLSVYRGSGGIQAL 204 (305)
Q Consensus 163 ~d~Vi~~~~g~--------------------------~~~----~a~~~g--------v~~~V~iSS~~~~~~~~~~~~~ 204 (305)
+|++|++++.. +.. ...+.. ..++|++||...+.+......|
T Consensus 87 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y 166 (258)
T PRK06949 87 IDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRVLPQIGLY 166 (258)
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccCCCCCccHH
Confidence 79999874310 000 011111 3589999998776654444445
Q ss_pred cchHHH--HHHHHHHHHHHhCCCCEEEEecCCcccCCCCC---cc--eeeecCCCCCCccCHHHHHHHHHHHhhCCC--C
Q 021928 205 MKGNAR--KLAEQDESMLMASGIPYTIIRTGVLQNTPGGK---QG--FQFEEGCAANGSLSKEDAAFICVEALESIP--Q 275 (305)
Q Consensus 205 ~~~~~~--~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~---~~--~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~ 275 (305)
...+.. ...+.....+...++++++|+||++....... .. ..+..-.....+..++|+|+.++.++.... .
T Consensus 167 ~~sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~~ 246 (258)
T PRK06949 167 CMSKAAVVHMTRAMALEWGRHGINVNAICPGYIDTEINHHHWETEQGQKLVSMLPRKRVGKPEDLDGLLLLLAADESQFI 246 (258)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCcCCcchhccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHhChhhcCC
Confidence 433221 11111112233468999999999975332211 00 000000112345568999999999987543 4
Q ss_pred CCcEEEEecC
Q 021928 276 TGLIFEVVNG 285 (305)
Q Consensus 276 ~~~~~~v~~g 285 (305)
.|+.+.+.+|
T Consensus 247 ~G~~i~~dgg 256 (258)
T PRK06949 247 NGAIISADDG 256 (258)
T ss_pred CCcEEEeCCC
Confidence 5777777654
|
|
| >PRK12938 acetyacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=2.4e-13 Score=120.64 Aligned_cols=188 Identities=13% Similarity=0.113 Sum_probs=120.6
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcC-cchhhh------hcCCCcEEeecCCCCHHHHHHHhc-------Cc
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKD-KRNAME------SFGTYVESMAGDASNKKFLKTALR-------GV 163 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~-~~~~~~------~~~~~v~~v~~D~~d~~~~~~~~~-------~~ 163 (305)
+++++||||+|+||++++++|+++|++|+++.+. .....+ ..+..+.++.+|+.|.+++.++++ ++
T Consensus 3 ~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 82 (246)
T PRK12938 3 QRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVGEI 82 (246)
T ss_pred CCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence 4899999999999999999999999999886543 222111 113356778999999888876654 57
Q ss_pred cEEEECCcch------------------------------HhhhhhhcCCCEEEEEcccccccCCCCcccccchHH--HH
Q 021928 164 RSIICPSEGF------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA--RK 211 (305)
Q Consensus 164 d~Vi~~~~g~------------------------------~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~--~~ 211 (305)
|+|||+++.. +...+.+.+.++||++||.....+......|...+. ..
T Consensus 83 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sK~a~~~ 162 (246)
T PRK12938 83 DVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFGQTNYSTAKAGIHG 162 (246)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEechhccCCCCCChhHHHHHHHHHH
Confidence 9999984310 111234466789999999866555444444543322 11
Q ss_pred HHHHHHHHHHhCCCCEEEEecCCcccCCCCC-ccee---eecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEEEEecC
Q 021928 212 LAEQDESMLMASGIPYTIIRTGVLQNTPGGK-QGFQ---FEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVNG 285 (305)
Q Consensus 212 ~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~-~~~~---~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~v~~g 285 (305)
+.+.....+...+++++.++||++....... .+.. +..........+.+|++.++..++..+. ..++.+.+.++
T Consensus 163 ~~~~l~~~~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~l~~~~~~~~~g~~~~~~~g 242 (246)
T PRK12938 163 FTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIRPDVLEKIVATIPVRRLGSPDEIGSIVAWLASEESGFSTGADFSLNGG 242 (246)
T ss_pred HHHHHHHHhhhhCeEEEEEEecccCCchhhhcChHHHHHHHhcCCccCCcCHHHHHHHHHHHcCcccCCccCcEEEECCc
Confidence 1122222344578999999999975432211 0000 0011122345688999999999886543 46788888765
|
|
| >PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=1.7e-13 Score=123.16 Aligned_cols=189 Identities=15% Similarity=0.139 Sum_probs=120.9
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCc-chhhh-------hcCCCcEEeecCCCCHHHHHHHhc-------
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK-RNAME-------SFGTYVESMAGDASNKKFLKTALR------- 161 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~-~~~~~-------~~~~~v~~v~~D~~d~~~~~~~~~------- 161 (305)
++|+++||||+++||++++++|+++|++|+++.|+. +.... ..+.++.++.+|++|.++++++++
T Consensus 7 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 86 (260)
T PRK08416 7 KGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDEDFD 86 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhcC
Confidence 458999999999999999999999999999887643 22111 123468899999999888876664
Q ss_pred CccEEEECCc--------c--hH--------------------------hhhhhhcCCCEEEEEcccccccCCCCccccc
Q 021928 162 GVRSIICPSE--------G--FI--------------------------SNAGSLKGVQHVILLSQLSVYRGSGGIQALM 205 (305)
Q Consensus 162 ~~d~Vi~~~~--------g--~~--------------------------~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~ 205 (305)
.+|++|++++ + .+ ....++.+..+||++||.....+.+....|.
T Consensus 87 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~ 166 (260)
T PRK08416 87 RVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVGGGSIISLSSTGNLVYIENYAGHG 166 (260)
T ss_pred CccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccCCEEEEEEeccccccCCCCcccch
Confidence 4699998742 0 00 0012233456899999987655544444554
Q ss_pred chHH--HHHHHHHHHHHHhCCCCEEEEecCCcccCCCCC----cce--eeecCCCCCCccCHHHHHHHHHHHhhCCC--C
Q 021928 206 KGNA--RKLAEQDESMLMASGIPYTIIRTGVLQNTPGGK----QGF--QFEEGCAANGSLSKEDAAFICVEALESIP--Q 275 (305)
Q Consensus 206 ~~~~--~~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~----~~~--~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~ 275 (305)
.++. ..+.+.....+...++.++.|.||++....... ... .+........+.+++|+|.+++.++.... .
T Consensus 167 asK~a~~~~~~~la~el~~~gi~v~~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~r~~~p~~va~~~~~l~~~~~~~~ 246 (260)
T PRK08416 167 TSKAAVETMVKYAATELGEKNIRVNAVSGGPIDTDALKAFTNYEEVKAKTEELSPLNRMGQPEDLAGACLFLCSEKASWL 246 (260)
T ss_pred hhHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccChhhhhccCCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcChhhhcc
Confidence 4332 112222233345579999999999864332110 000 00011112346789999999999986543 3
Q ss_pred CCcEEEEecC
Q 021928 276 TGLIFEVVNG 285 (305)
Q Consensus 276 ~~~~~~v~~g 285 (305)
.++.+.+.+|
T Consensus 247 ~G~~i~vdgg 256 (260)
T PRK08416 247 TGQTIVVDGG 256 (260)
T ss_pred cCcEEEEcCC
Confidence 5778877655
|
|
| >PRK05717 oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=99.56 E-value=3e-13 Score=120.98 Aligned_cols=191 Identities=14% Similarity=0.143 Sum_probs=120.6
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh---hcCCCcEEeecCCCCHHHHHHHhc-------Ccc
Q 021928 95 PEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALR-------GVR 164 (305)
Q Consensus 95 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~---~~~~~v~~v~~D~~d~~~~~~~~~-------~~d 164 (305)
...+++|+||||+|+||++++++|+++|++|+++.|++.+..+ ..+.++.++.+|++|.+++.++++ .+|
T Consensus 7 ~~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id 86 (255)
T PRK05717 7 GHNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKALGENAWFIAMDVADEAQVAAGVAEVLGQFGRLD 86 (255)
T ss_pred ccCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence 3456899999999999999999999999999999887654322 234468899999999887765543 469
Q ss_pred EEEECCcch----------------------------Hhhhhh---hcCCCEEEEEcccccccCCCCcccccchHHHHHH
Q 021928 165 SIICPSEGF----------------------------ISNAGS---LKGVQHVILLSQLSVYRGSGGIQALMKGNARKLA 213 (305)
Q Consensus 165 ~Vi~~~~g~----------------------------~~~~a~---~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~~~~ 213 (305)
++||+++.. +.+++. .....+||++||...+.+......|...++...
T Consensus 87 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~ii~~sS~~~~~~~~~~~~Y~~sKaa~~- 165 (255)
T PRK05717 87 ALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHNGAIVNLASTRARQSEPDTEAYAASKGGLL- 165 (255)
T ss_pred EEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCcEEEEEcchhhcCCCCCCcchHHHHHHHH-
Confidence 999883310 111121 122368999999877665544445544322110
Q ss_pred HHHHHHHHh--CCCCEEEEecCCcccCCCCCc---cee--eecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEEEEec
Q 021928 214 EQDESMLMA--SGIPYTIIRTGVLQNTPGGKQ---GFQ--FEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVN 284 (305)
Q Consensus 214 ~~aE~~l~~--~gi~~tilRPg~l~~~~~~~~---~~~--~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~v~~ 284 (305)
..++.+-++ .++.++.++||++........ ... ...........+++|+|.++..++.... ..++.+.+.+
T Consensus 166 ~~~~~la~~~~~~i~v~~i~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~~g 245 (255)
T PRK05717 166 ALTHALAISLGPEIRVNAVSPGWIDARDPSQRRAEPLSEADHAQHPAGRVGTVEDVAAMVAWLLSRQAGFVTGQEFVVDG 245 (255)
T ss_pred HHHHHHHHHhcCCCEEEEEecccCcCCccccccchHHHHHHhhcCCCCCCcCHHHHHHHHHHHcCchhcCccCcEEEECC
Confidence 011111122 358999999999654321110 000 0011122356689999999998886543 3578888865
Q ss_pred CC
Q 021928 285 GE 286 (305)
Q Consensus 285 g~ 286 (305)
+.
T Consensus 246 g~ 247 (255)
T PRK05717 246 GM 247 (255)
T ss_pred Cc
Confidence 53
|
|
| >PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.56 E-value=2.9e-13 Score=121.12 Aligned_cols=191 Identities=12% Similarity=0.088 Sum_probs=124.9
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh------hcCCCcEEeecCCCCHHHHHHHhc-------C
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTALR-------G 162 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~------~~~~~v~~v~~D~~d~~~~~~~~~-------~ 162 (305)
..+++|+||||+|+||++++++|+++|++|++++|+.+...+ ..+.++.++.+|++|.+++.++++ .
T Consensus 9 l~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~ 88 (255)
T PRK06113 9 LDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSKLGK 88 (255)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 346999999999999999999999999999999988654321 123457889999999988776554 4
Q ss_pred ccEEEECCcch-------------------------Hhhhh----hhcCCCEEEEEcccccccCCCCcccccchHHH--H
Q 021928 163 VRSIICPSEGF-------------------------ISNAG----SLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--K 211 (305)
Q Consensus 163 ~d~Vi~~~~g~-------------------------~~~~a----~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~--~ 211 (305)
+|++|++++.. +...+ .+.+..+||++||.....+..+...|...+.. .
T Consensus 89 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~ 168 (255)
T PRK06113 89 VDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASH 168 (255)
T ss_pred CCEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEecccccCCCCCcchhHHHHHHHHH
Confidence 69999883310 11111 23345699999998877665555555443321 1
Q ss_pred HHHHHHHHHHhCCCCEEEEecCCcccCCCCCc--cee---eecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEEEEec
Q 021928 212 LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQ--GFQ---FEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVN 284 (305)
Q Consensus 212 ~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~~--~~~---~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~v~~ 284 (305)
+.+.....+...++.++++.||.+........ ... .........+.+++|+|+++..++.... ..|+++.+.+
T Consensus 169 ~~~~la~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~~~G~~i~~~g 248 (255)
T PRK06113 169 LVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTPIRRLGQPQDIANAALFLCSPAASWVSGQILTVSG 248 (255)
T ss_pred HHHHHHHHhhhhCeEEEEEecccccccccccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCccCCEEEECC
Confidence 11112223345789999999999653321110 000 0011112335688999999999997543 3688999987
Q ss_pred CC
Q 021928 285 GE 286 (305)
Q Consensus 285 g~ 286 (305)
|.
T Consensus 249 g~ 250 (255)
T PRK06113 249 GG 250 (255)
T ss_pred Cc
Confidence 74
|
|
| >TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=99.56 E-value=2.7e-13 Score=147.79 Aligned_cols=203 Identities=16% Similarity=0.159 Sum_probs=137.5
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCC----CeEEEEEcCcchhh--h--------------hcCCCcEEeecCCCC----
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKR----TRIKALVKDKRNAM--E--------------SFGTYVESMAGDASN---- 152 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g----~~V~~~~R~~~~~~--~--------------~~~~~v~~v~~D~~d---- 152 (305)
..++|+||||+||+|++++++|++++ ++|+++.|...... + ....+++++.+|+.+
T Consensus 970 ~~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lg 1049 (1389)
T TIGR03443 970 TPITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFG 1049 (1389)
T ss_pred CCceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCC
Confidence 35899999999999999999999887 79999999754311 0 012368899999974
Q ss_pred --HHHHHHHhcCccEEEECCcc-------------------hHhhhhhhcCCCEEEEEcccccccCCC------------
Q 021928 153 --KKFLKTALRGVRSIICPSEG-------------------FISNAGSLKGVQHVILLSQLSVYRGSG------------ 199 (305)
Q Consensus 153 --~~~~~~~~~~~d~Vi~~~~g-------------------~~~~~a~~~gv~~~V~iSS~~~~~~~~------------ 199 (305)
.+.+..+..++|+|||+++. .+.+++.+.++++|+|+||.+++....
T Consensus 1050 l~~~~~~~l~~~~d~iiH~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~vSS~~v~~~~~~~~~~~~~~~~~ 1129 (1389)
T TIGR03443 1050 LSDEKWSDLTNEVDVIIHNGALVHWVYPYSKLRDANVIGTINVLNLCAEGKAKQFSFVSSTSALDTEYYVNLSDELVQAG 1129 (1389)
T ss_pred cCHHHHHHHHhcCCEEEECCcEecCccCHHHHHHhHHHHHHHHHHHHHhCCCceEEEEeCeeecCcccccchhhhhhhcc
Confidence 46677778899999998331 134567778899999999988763210
Q ss_pred --Ccc--------cc-cchHHHHHHHHHHHHHHh---CCCCEEEEecCCcccCCCCCcc----------------eeeec
Q 021928 200 --GIQ--------AL-MKGNARKLAEQDESMLMA---SGIPYTIIRTGVLQNTPGGKQG----------------FQFEE 249 (305)
Q Consensus 200 --~~~--------~~-~~~~~~~~~~~aE~~l~~---~gi~~tilRPg~l~~~~~~~~~----------------~~~~~ 249 (305)
... .. ....+...|..+|.++.. .+++++++|||.+.+....+.. -.++.
T Consensus 1130 ~~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~~~g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~p~ 1209 (1389)
T TIGR03443 1130 GAGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREAGKRGLRGCIVRPGYVTGDSKTGATNTDDFLLRMLKGCIQLGLIPN 1209 (1389)
T ss_pred CCCCCcccccccccccCCCChHHHHHHHHHHHHHHHhCCCCEEEECCCccccCCCcCCCCchhHHHHHHHHHHHhCCcCC
Confidence 000 00 000122234456666543 6899999999997643221100 00112
Q ss_pred CCCCCCccCHHHHHHHHHHHhhCCCC--CCcEEEEecCC-cCHHHHHHHHHHh
Q 021928 250 GCAANGSLSKEDAAFICVEALESIPQ--TGLIFEVVNGE-EKVSDWKKCFSRL 299 (305)
Q Consensus 250 ~~~~~~~Is~~DvA~~iv~~l~~~~~--~~~~~~v~~g~-~s~~d~~~~~~~l 299 (305)
......+++++|+|++++.++.++.. .+.+||+.++. .++.++.+.+.+.
T Consensus 1210 ~~~~~~~~~Vddva~ai~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~ 1262 (1389)
T TIGR03443 1210 INNTVNMVPVDHVARVVVAAALNPPKESELAVAHVTGHPRIRFNDFLGTLKTY 1262 (1389)
T ss_pred CCCccccccHHHHHHHHHHHHhCCcccCCCCEEEeCCCCCCcHHHHHHHHHHh
Confidence 23346789999999999999876642 34689999875 5788888877653
|
Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal. |
| >PRK07576 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=2e-13 Score=123.12 Aligned_cols=190 Identities=15% Similarity=0.151 Sum_probs=122.1
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh------cCCCcEEeecCCCCHHHHHHHhc-------C
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------G 162 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~~~v~~v~~D~~d~~~~~~~~~-------~ 162 (305)
.++++++||||+|+||++++++|+++|++|+++.|+++...+. .+.++.++.+|++|.+++.++++ +
T Consensus 7 ~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~~~ 86 (264)
T PRK07576 7 FAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEFGP 86 (264)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 3468999999999999999999999999999999987653211 22356788999999888877664 4
Q ss_pred ccEEEECCcch--------------------------Hhhh----hhhcCCCEEEEEcccccccCCCCcccccchHH--H
Q 021928 163 VRSIICPSEGF--------------------------ISNA----GSLKGVQHVILLSQLSVYRGSGGIQALMKGNA--R 210 (305)
Q Consensus 163 ~d~Vi~~~~g~--------------------------~~~~----a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~--~ 210 (305)
+|++||+++.. +..+ .++.+ ++||++||..+..+......|...+. .
T Consensus 87 iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~-g~iv~iss~~~~~~~~~~~~Y~asK~a~~ 165 (264)
T PRK07576 87 IDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRPG-ASIIQISAPQAFVPMPMQAHVCAAKAGVD 165 (264)
T ss_pred CCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CEEEEECChhhccCCCCccHHHHHHHHHH
Confidence 69999874310 0111 11122 59999999876655444444443221 1
Q ss_pred HHHHHHHHHHHhCCCCEEEEecCCcccCCC--C---Ccce--eeecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEEE
Q 021928 211 KLAEQDESMLMASGIPYTIIRTGVLQNTPG--G---KQGF--QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFE 281 (305)
Q Consensus 211 ~~~~~aE~~l~~~gi~~tilRPg~l~~~~~--~---~~~~--~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~ 281 (305)
.+.+.....+...++.++.++||.+.+... . .... .+........+.+++|+|+.++.++..+. ..++.+.
T Consensus 166 ~l~~~la~e~~~~gi~v~~v~pg~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~ 245 (264)
T PRK07576 166 MLTRTLALEWGPEGIRVNSIVPGPIAGTEGMARLAPSPELQAAVAQSVPLKRNGTKQDIANAALFLASDMASYITGVVLP 245 (264)
T ss_pred HHHHHHHHHhhhcCeEEEEEecccccCcHHHhhcccCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcChhhcCccCCEEE
Confidence 111112222334789999999998643211 0 0000 00011122446789999999999997543 3678888
Q ss_pred EecCC
Q 021928 282 VVNGE 286 (305)
Q Consensus 282 v~~g~ 286 (305)
+.++.
T Consensus 246 ~~gg~ 250 (264)
T PRK07576 246 VDGGW 250 (264)
T ss_pred ECCCc
Confidence 88764
|
|
| >PRK06196 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=1.3e-13 Score=127.56 Aligned_cols=178 Identities=16% Similarity=0.094 Sum_probs=111.8
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcC--CCcEEeecCCCCHHHHHHHhc-------CccEEE
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG--TYVESMAGDASNKKFLKTALR-------GVRSII 167 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~--~~v~~v~~D~~d~~~~~~~~~-------~~d~Vi 167 (305)
.+++|+||||+|+||++++++|+++|++|++++|++++..+... .++.++.+|++|.++++++++ ++|++|
T Consensus 25 ~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~li 104 (315)
T PRK06196 25 SGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGIDGVEVVMLDLADLESVRAFAERFLDSGRRIDILI 104 (315)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhCeEEEccCCCHHHHHHHHHHHHhcCCCCCEEE
Confidence 45899999999999999999999999999999999766433221 247899999999988877663 579999
Q ss_pred ECCcc-----------h-----------------HhhhhhhcCCCEEEEEcccccccCC------------CCcccccch
Q 021928 168 CPSEG-----------F-----------------ISNAGSLKGVQHVILLSQLSVYRGS------------GGIQALMKG 207 (305)
Q Consensus 168 ~~~~g-----------~-----------------~~~~a~~~gv~~~V~iSS~~~~~~~------------~~~~~~~~~ 207 (305)
|+++. . +...+++.+..+||++||.+..... .....|..+
T Consensus 105 ~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~~~~~~~~Y~~S 184 (315)
T PRK06196 105 NNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAGAGARVVALSSAGHRRSPIRWDDPHFTRGYDKWLAYGQS 184 (315)
T ss_pred ECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEECCHHhccCCCCccccCccCCCChHHHHHHH
Confidence 87431 0 1122344555799999997543211 011122222
Q ss_pred HHH--HHHHHHHHHHHhCCCCEEEEecCCcccCCCCCcc----e---eeec-CCCC-CCccCHHHHHHHHHHHhhCCC
Q 021928 208 NAR--KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQG----F---QFEE-GCAA-NGSLSKEDAAFICVEALESIP 274 (305)
Q Consensus 208 ~~~--~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~~~----~---~~~~-~~~~-~~~Is~~DvA~~iv~~l~~~~ 274 (305)
+.. .+.+.....+...++.++.|+||++......... . .+.. .... ....+++|+|..++.++..+.
T Consensus 185 K~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~ 262 (315)
T PRK06196 185 KTANALFAVHLDKLGKDQGVRAFSVHPGGILTPLQRHLPREEQVALGWVDEHGNPIDPGFKTPAQGAATQVWAATSPQ 262 (315)
T ss_pred HHHHHHHHHHHHHHhcCCCcEEEEeeCCcccCCccccCChhhhhhhhhhhhhhhhhhhhcCCHhHHHHHHHHHhcCCc
Confidence 111 0111122223457899999999997543221100 0 0000 0000 024578999999999997654
|
|
| >PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=4e-13 Score=119.34 Aligned_cols=188 Identities=16% Similarity=0.183 Sum_probs=121.1
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh------cCCCcEEeecCCCCHHHHHHHhc-------Cc
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GV 163 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~~~v~~v~~D~~d~~~~~~~~~-------~~ 163 (305)
.+++++||||+|+||+++++.|+++|++|+++.|++.+..+. .+.++.++.+|++|.+++.++++ .+
T Consensus 4 ~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 83 (253)
T PRK08217 4 KDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQL 83 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 458999999999999999999999999999999987553211 23467889999999887766554 46
Q ss_pred cEEEECCcch------------H-h--------------------------hhh-hhcCCCEEEEEcccccccCCCCccc
Q 021928 164 RSIICPSEGF------------I-S--------------------------NAG-SLKGVQHVILLSQLSVYRGSGGIQA 203 (305)
Q Consensus 164 d~Vi~~~~g~------------~-~--------------------------~~a-~~~gv~~~V~iSS~~~~~~~~~~~~ 203 (305)
|+|||+++.. . . ... +...-.+||++||...+. ..+...
T Consensus 84 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~~~~~-~~~~~~ 162 (253)
T PRK08217 84 NGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIARAG-NMGQTN 162 (253)
T ss_pred CEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEccccccC-CCCCch
Confidence 9999884310 0 0 001 111234789999876553 233344
Q ss_pred ccchHH--HHHHHHHHHHHHhCCCCEEEEecCCcccCCCCC-cce---eeecCCCCCCccCHHHHHHHHHHHhhCCCCCC
Q 021928 204 LMKGNA--RKLAEQDESMLMASGIPYTIIRTGVLQNTPGGK-QGF---QFEEGCAANGSLSKEDAAFICVEALESIPQTG 277 (305)
Q Consensus 204 ~~~~~~--~~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~-~~~---~~~~~~~~~~~Is~~DvA~~iv~~l~~~~~~~ 277 (305)
|...++ ..+.+.....+...+++++.++||.+....... ... .+..........+.+|+|+++..++......+
T Consensus 163 Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~g 242 (253)
T PRK08217 163 YSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEMTAAMKPEALERLEKMIPVGRLGEPEEIAHTVRFIIENDYVTG 242 (253)
T ss_pred hHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccCHHHHHHHHhcCCcCCCcCHHHHHHHHHHHHcCCCcCC
Confidence 443332 111112222334578999999999975432211 000 00011122345689999999999997655678
Q ss_pred cEEEEecC
Q 021928 278 LIFEVVNG 285 (305)
Q Consensus 278 ~~~~v~~g 285 (305)
++|++.+|
T Consensus 243 ~~~~~~gg 250 (253)
T PRK08217 243 RVLEIDGG 250 (253)
T ss_pred cEEEeCCC
Confidence 99999876
|
|
| >PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=3.1e-13 Score=120.94 Aligned_cols=189 Identities=17% Similarity=0.075 Sum_probs=118.4
Q ss_pred CCCEEEEEcCCC--hHHHHHHHHHHhCCCeEEEEEcCcc-----------hh------hhhcCCCcEEeecCCCCHHHHH
Q 021928 97 ARDAVLVTDGDS--DIGQMVILSLIVKRTRIKALVKDKR-----------NA------MESFGTYVESMAGDASNKKFLK 157 (305)
Q Consensus 97 ~~~~vlVtGatG--~iG~~l~~~L~~~g~~V~~~~R~~~-----------~~------~~~~~~~v~~v~~D~~d~~~~~ 157 (305)
++++|+||||+| +||++++++|+++|++|+++.|++. .. ....+.++.++.+|++|.+++.
T Consensus 4 ~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~ 83 (256)
T PRK12748 4 MKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQPYAPN 83 (256)
T ss_pred CCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCCHHHHH
Confidence 458999999995 7999999999999999999998721 11 1112346889999999988876
Q ss_pred HHhc-------CccEEEECCcch--------------------------Hhhhh----hhcCCCEEEEEcccccccCCCC
Q 021928 158 TALR-------GVRSIICPSEGF--------------------------ISNAG----SLKGVQHVILLSQLSVYRGSGG 200 (305)
Q Consensus 158 ~~~~-------~~d~Vi~~~~g~--------------------------~~~~a----~~~gv~~~V~iSS~~~~~~~~~ 200 (305)
.+++ .+|+|||+++.. +..++ ...+.++||++||...+.+..+
T Consensus 84 ~~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~ 163 (256)
T PRK12748 84 RVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTSGQSLGPMPD 163 (256)
T ss_pred HHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCeEEEEECCccccCCCCC
Confidence 6554 469999884310 11111 1234568999999877665444
Q ss_pred cccccchHHHH--HHHHHHHHHHhCCCCEEEEecCCcccCCCCCcc-eeeecCCCCCCccCHHHHHHHHHHHhhCCC--C
Q 021928 201 IQALMKGNARK--LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQG-FQFEEGCAANGSLSKEDAAFICVEALESIP--Q 275 (305)
Q Consensus 201 ~~~~~~~~~~~--~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~~~-~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~ 275 (305)
...|...+... +.+.....+...+++++.++||.+......... ..+........+...+|+|+.+..++.... .
T Consensus 164 ~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~ 243 (256)
T PRK12748 164 ELAYAATKGAIEAFTKSLAPELAEKGITVNAVNPGPTDTGWITEELKHHLVPKFPQGRVGEPVDAARLIAFLVSEEAKWI 243 (256)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEeCcccCCCCChhHHHhhhccCCCCCCcCHHHHHHHHHHHhCcccccc
Confidence 44444332211 111111223446899999999986433211110 000011111235678999999998886543 3
Q ss_pred CCcEEEEecC
Q 021928 276 TGLIFEVVNG 285 (305)
Q Consensus 276 ~~~~~~v~~g 285 (305)
.++++++.+|
T Consensus 244 ~g~~~~~d~g 253 (256)
T PRK12748 244 TGQVIHSEGG 253 (256)
T ss_pred cCCEEEecCC
Confidence 5788888765
|
|
| >PRK07985 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=4.8e-13 Score=122.76 Aligned_cols=190 Identities=18% Similarity=0.225 Sum_probs=121.1
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcc--hhh---h---hcCCCcEEeecCCCCHHHHHHHhc-------
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR--NAM---E---SFGTYVESMAGDASNKKFLKTALR------- 161 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~--~~~---~---~~~~~v~~v~~D~~d~~~~~~~~~------- 161 (305)
.+++++||||+|+||++++++|+++|++|+++.|+.. ... + ..+.++.++.+|++|.+++.++++
T Consensus 48 ~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 127 (294)
T PRK07985 48 KDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKALG 127 (294)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 4589999999999999999999999999998876532 111 1 123457789999999887766553
Q ss_pred CccEEEECCcc------h---------------------Hhhhhhh--cCCCEEEEEcccccccCCCCcccccchHHH--
Q 021928 162 GVRSIICPSEG------F---------------------ISNAGSL--KGVQHVILLSQLSVYRGSGGIQALMKGNAR-- 210 (305)
Q Consensus 162 ~~d~Vi~~~~g------~---------------------~~~~a~~--~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~-- 210 (305)
++|++|++++. . +..++.. ..-.+||++||..++.+......|...++.
T Consensus 128 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~~~~~~~~~~~Y~asKaal~ 207 (294)
T PRK07985 128 GLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQAYQPSPHLLDYAATKAAIL 207 (294)
T ss_pred CCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCchhccCCCCcchhHHHHHHHH
Confidence 57999987331 0 1111111 112589999999887765555555543321
Q ss_pred HHHHHHHHHHHhCCCCEEEEecCCcccCCC---C-Ccce--eeecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEEEE
Q 021928 211 KLAEQDESMLMASGIPYTIIRTGVLQNTPG---G-KQGF--QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEV 282 (305)
Q Consensus 211 ~~~~~aE~~l~~~gi~~tilRPg~l~~~~~---~-~~~~--~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~v 282 (305)
.+.+.....+...++++..|+||++..... . .... .+........+..++|||.+++.++.... ..++++.+
T Consensus 208 ~l~~~la~el~~~gIrvn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~pedva~~~~fL~s~~~~~itG~~i~v 287 (294)
T PRK07985 208 NYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPMKRAGQPAELAPVYVYLASQESSYVTAEVHGV 287 (294)
T ss_pred HHHHHHHHHHhHhCcEEEEEECCcCccccccccCCCHHHHHHHhccCCCCCCCCHHHHHHHHHhhhChhcCCccccEEee
Confidence 111222223445799999999999653321 0 0000 01111122345689999999999997544 35788888
Q ss_pred ecCC
Q 021928 283 VNGE 286 (305)
Q Consensus 283 ~~g~ 286 (305)
.+|.
T Consensus 288 dgG~ 291 (294)
T PRK07985 288 CGGE 291 (294)
T ss_pred CCCe
Confidence 7663
|
|
| >PRK07814 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=2.9e-13 Score=121.79 Aligned_cols=188 Identities=16% Similarity=0.145 Sum_probs=120.5
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh------cCCCcEEeecCCCCHHHHHHHhc-------Cc
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GV 163 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~~~v~~v~~D~~d~~~~~~~~~-------~~ 163 (305)
.+++++||||+|+||++++++|+++|++|++++|++++..+. .+.++.++.+|++|.+++.++++ ++
T Consensus 9 ~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 88 (263)
T PRK07814 9 DDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAFGRL 88 (263)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 468999999999999999999999999999999987653221 13468889999999988876664 67
Q ss_pred cEEEECCcc-----h---------------------Hhhhhh-----hcCCCEEEEEcccccccCCCCcccccchHHHH-
Q 021928 164 RSIICPSEG-----F---------------------ISNAGS-----LKGVQHVILLSQLSVYRGSGGIQALMKGNARK- 211 (305)
Q Consensus 164 d~Vi~~~~g-----~---------------------~~~~a~-----~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~~- 211 (305)
|+|||+++. . +.+++. ..+.++||++||.....+..+...|..++...
T Consensus 89 d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sK~a~~ 168 (263)
T PRK07814 89 DIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGRLAGRGFAAYGTAKAALA 168 (263)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccccccCCCCCCchhHHHHHHHH
Confidence 999997431 0 111111 14567899999987765555554554433211
Q ss_pred -HHHHHHHHHHhCCCCEEEEecCCcccCCCC----Cccee--eecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEEEE
Q 021928 212 -LAEQDESMLMASGIPYTIIRTGVLQNTPGG----KQGFQ--FEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEV 282 (305)
Q Consensus 212 -~~~~aE~~l~~~gi~~tilRPg~l~~~~~~----~~~~~--~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~v 282 (305)
+.+.....+ ...+.++.++||.+...... ..... +..........+.+|+|++++.++.... ..++.+.+
T Consensus 169 ~~~~~~~~e~-~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~ 247 (263)
T PRK07814 169 HYTRLAALDL-CPRIRVNAIAPGSILTSALEVVAANDELRAPMEKATPLRRLGDPEDIAAAAVYLASPAGSYLTGKTLEV 247 (263)
T ss_pred HHHHHHHHHH-CCCceEEEEEeCCCcCchhhhccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCcCCCEEEE
Confidence 011111111 13588999999986432111 00000 0000111234688999999999997542 46788888
Q ss_pred ecC
Q 021928 283 VNG 285 (305)
Q Consensus 283 ~~g 285 (305)
.++
T Consensus 248 ~~~ 250 (263)
T PRK07814 248 DGG 250 (263)
T ss_pred CCC
Confidence 765
|
|
| >PRK06194 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=6e-13 Score=121.00 Aligned_cols=176 Identities=10% Similarity=0.030 Sum_probs=111.2
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh------cCCCcEEeecCCCCHHHHHHHhc-------Cc
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GV 163 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~~~v~~v~~D~~d~~~~~~~~~-------~~ 163 (305)
.+++||||||+|+||++++++|+++|++|++++|+.+...+. .+.++.++.+|++|.+++.++++ .+
T Consensus 5 ~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~i 84 (287)
T PRK06194 5 AGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFGAV 84 (287)
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 358999999999999999999999999999999986542221 13357789999999998888776 47
Q ss_pred cEEEECCcch--------------------------H----hhhhhhcCC------CEEEEEcccccccCCCCcccccch
Q 021928 164 RSIICPSEGF--------------------------I----SNAGSLKGV------QHVILLSQLSVYRGSGGIQALMKG 207 (305)
Q Consensus 164 d~Vi~~~~g~--------------------------~----~~~a~~~gv------~~~V~iSS~~~~~~~~~~~~~~~~ 207 (305)
|+|||+++.. + ...+.+.+. .++|++||..++.+......|...
T Consensus 85 d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~s 164 (287)
T PRK06194 85 HLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLLAPPAMGIYNVS 164 (287)
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCCCCcchHHH
Confidence 9999884310 0 001222332 589999998887665555555443
Q ss_pred HHH--HHHHHHHHHHH--hCCCCEEEEecCCcccCCCC---Cccee-eecCCC---------------CCCccCHHHHHH
Q 021928 208 NAR--KLAEQDESMLM--ASGIPYTIIRTGVLQNTPGG---KQGFQ-FEEGCA---------------ANGSLSKEDAAF 264 (305)
Q Consensus 208 ~~~--~~~~~aE~~l~--~~gi~~tilRPg~l~~~~~~---~~~~~-~~~~~~---------------~~~~Is~~DvA~ 264 (305)
+.. .+.+.....+. ..++.++.+.||++...... .+... .+.+.. ....++++|+|+
T Consensus 165 K~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~dva~ 244 (287)
T PRK06194 165 KHAVVSLTETLYQDLSLVTDQVGASVLCPYFVPTGIWQSERNRPADLANTAPPTRSQLIAQAMSQKAVGSGKVTAEEVAQ 244 (287)
T ss_pred HHHHHHHHHHHHHHHhhcCCCeEEEEEEeCcccCccccccccCchhcccCccccchhhHHHHHHHhhhhccCCCHHHHHH
Confidence 321 11111111122 24578888999886432211 01111 111010 113479999999
Q ss_pred HHHHHhhC
Q 021928 265 ICVEALES 272 (305)
Q Consensus 265 ~iv~~l~~ 272 (305)
.++.++..
T Consensus 245 ~i~~~~~~ 252 (287)
T PRK06194 245 LVFDAIRA 252 (287)
T ss_pred HHHHHHHc
Confidence 99998853
|
|
| >KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.54 E-value=2.8e-13 Score=120.12 Aligned_cols=201 Identities=20% Similarity=0.236 Sum_probs=139.9
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCC--CeEEEEEc-----Ccchhhh-hcCCCcEEeecCCCCHHHHHHHhc--CccEEEE
Q 021928 99 DAVLVTDGDSDIGQMVILSLIVKR--TRIKALVK-----DKRNAME-SFGTYVESMAGDASNKKFLKTALR--GVRSIIC 168 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~~~g--~~V~~~~R-----~~~~~~~-~~~~~v~~v~~D~~d~~~~~~~~~--~~d~Vi~ 168 (305)
++++||||.||||++.++.+...- ++.+.+.. +...+.+ ...++.+++.+|+.+...+...+. .+|.|+|
T Consensus 7 ~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~~~~l~~~~n~p~ykfv~~di~~~~~~~~~~~~~~id~vih 86 (331)
T KOG0747|consen 7 KNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSNLKNLEPVRNSPNYKFVEGDIADADLVLYLFETEEIDTVIH 86 (331)
T ss_pred ceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccccchhhhhccCCCceEeeccccchHHHHhhhccCchhhhhh
Confidence 899999999999999999999763 45554432 2111111 234688999999999888877775 5788987
Q ss_pred CCcc----------------------hHhhhhhhc-CCCEEEEEcccccccCCCC---------cccccchHHHHHHHHH
Q 021928 169 PSEG----------------------FISNAGSLK-GVQHVILLSQLSVYRGSGG---------IQALMKGNARKLAEQD 216 (305)
Q Consensus 169 ~~~g----------------------~~~~~a~~~-gv~~~V~iSS~~~~~~~~~---------~~~~~~~~~~~~~~~a 216 (305)
.++. .+.+.++.. ++++||++||..+|+.+.. +.+..+|.+ -+.++
T Consensus 87 faa~t~vd~s~~~~~~~~~nnil~t~~Lle~~~~sg~i~~fvhvSTdeVYGds~~~~~~~E~s~~nPtnpyAa--sKaAa 164 (331)
T KOG0747|consen 87 FAAQTHVDRSFGDSFEFTKNNILSTHVLLEAVRVSGNIRRFVHVSTDEVYGDSDEDAVVGEASLLNPTNPYAA--SKAAA 164 (331)
T ss_pred hHhhhhhhhhcCchHHHhcCCchhhhhHHHHHHhccCeeEEEEecccceecCccccccccccccCCCCCchHH--HHHHH
Confidence 6331 134445554 7999999999999975322 222333333 23456
Q ss_pred HHHHH----hCCCCEEEEecCCcccCCC---------------CCcceeeecCCCCCCccCHHHHHHHHHHHhhCCCCCC
Q 021928 217 ESMLM----ASGIPYTIIRTGVLQNTPG---------------GKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTG 277 (305)
Q Consensus 217 E~~l~----~~gi~~tilRPg~l~~~~~---------------~~~~~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~~~~ 277 (305)
|..++ +.+++++++|-+.+++... +.+....+.+.....+++++|+++++-.++++ ...|
T Consensus 165 E~~v~Sy~~sy~lpvv~~R~nnVYGP~q~~~klipkFi~l~~~~~~~~i~g~g~~~rs~l~veD~~ea~~~v~~K-g~~g 243 (331)
T KOG0747|consen 165 EMLVRSYGRSYGLPVVTTRMNNVYGPNQYPEKLIPKFIKLAMRGKEYPIHGDGLQTRSYLYVEDVSEAFKAVLEK-GELG 243 (331)
T ss_pred HHHHHHHhhccCCcEEEEeccCccCCCcChHHHhHHHHHHHHhCCCcceecCcccceeeEeHHHHHHHHHHHHhc-CCcc
Confidence 76665 4789999999888654321 12222234555668899999999999999987 5568
Q ss_pred cEEEEecCC-cCHHHHHHHHHHhhhh
Q 021928 278 LIFEVVNGE-EKVSDWKKCFSRLMEK 302 (305)
Q Consensus 278 ~~~~v~~g~-~s~~d~~~~~~~l~~~ 302 (305)
++|||+... .+..|+++.+.++.+.
T Consensus 244 eIYNIgtd~e~~~~~l~k~i~eli~~ 269 (331)
T KOG0747|consen 244 EIYNIGTDDEMRVIDLAKDICELFEK 269 (331)
T ss_pred ceeeccCcchhhHHHHHHHHHHHHHH
Confidence 999999754 5778888887777665
|
|
| >TIGR02415 23BDH acetoin reductases | Back alignment and domain information |
|---|
Probab=99.54 E-value=2.8e-13 Score=120.70 Aligned_cols=187 Identities=18% Similarity=0.136 Sum_probs=119.1
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh------hcCCCcEEeecCCCCHHHHHHHhc-------CccE
Q 021928 99 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTALR-------GVRS 165 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~------~~~~~v~~v~~D~~d~~~~~~~~~-------~~d~ 165 (305)
++++||||+|+||++++++|++.|++|+++.|+.+...+ ..+.++.++.+|++|.+++.+++. .+|+
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~ 80 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFDV 80 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 579999999999999999999999999999998654221 123467899999999988877654 4699
Q ss_pred EEECCcch--------------------------H----hhhhhhcC-CCEEEEEcccccccCCCCcccccchHHH--HH
Q 021928 166 IICPSEGF--------------------------I----SNAGSLKG-VQHVILLSQLSVYRGSGGIQALMKGNAR--KL 212 (305)
Q Consensus 166 Vi~~~~g~--------------------------~----~~~a~~~g-v~~~V~iSS~~~~~~~~~~~~~~~~~~~--~~ 212 (305)
|||+++.. + ...+++.+ .++||++||.....+.+....|...+.. .+
T Consensus 81 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~ 160 (254)
T TIGR02415 81 MVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGHEGNPILSAYSSTKFAVRGL 160 (254)
T ss_pred EEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhcCCCCCCcchHHHHHHHHHH
Confidence 99884310 0 01112222 2689999998776555555555443321 11
Q ss_pred HHHHHHHHHhCCCCEEEEecCCcccCCCCC------c--ceeee-------cCCCCCCccCHHHHHHHHHHHhhCCCC--
Q 021928 213 AEQDESMLMASGIPYTIIRTGVLQNTPGGK------Q--GFQFE-------EGCAANGSLSKEDAAFICVEALESIPQ-- 275 (305)
Q Consensus 213 ~~~aE~~l~~~gi~~tilRPg~l~~~~~~~------~--~~~~~-------~~~~~~~~Is~~DvA~~iv~~l~~~~~-- 275 (305)
.+.....+...++.++.++||.+....... + ...++ .......+.+++|+|+++..++..+..
T Consensus 161 ~~~l~~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~ 240 (254)
T TIGR02415 161 TQTAAQELAPKGITVNAYCPGIVKTPMWEEIDEETSEIAGKPIGEGFEEFSSEIALGRPSEPEDVAGLVSFLASEDSDYI 240 (254)
T ss_pred HHHHHHHhcccCeEEEEEecCcccChhhhhhhhhhhhcccCchHHHHHHHHhhCCCCCCCCHHHHHHHHHhhcccccCCc
Confidence 111112233468999999999864322100 0 00000 011123467889999999999987542
Q ss_pred CCcEEEEecC
Q 021928 276 TGLIFEVVNG 285 (305)
Q Consensus 276 ~~~~~~v~~g 285 (305)
.+..+.+.+|
T Consensus 241 ~g~~~~~d~g 250 (254)
T TIGR02415 241 TGQSILVDGG 250 (254)
T ss_pred cCcEEEecCC
Confidence 4667666654
|
One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733). |
| >PRK07041 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=2.7e-13 Score=119.20 Aligned_cols=180 Identities=16% Similarity=0.144 Sum_probs=119.9
Q ss_pred EEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh---c--CCCcEEeecCCCCHHHHHHHhcC---ccEEEECCcc-
Q 021928 102 LVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---F--GTYVESMAGDASNKKFLKTALRG---VRSIICPSEG- 172 (305)
Q Consensus 102 lVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~--~~~v~~v~~D~~d~~~~~~~~~~---~d~Vi~~~~g- 172 (305)
+||||+|+||++++++|+++|++|++++|++++.... . +.+++++.+|++|.+++.++++. +|.+|++++.
T Consensus 1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~id~li~~ag~~ 80 (230)
T PRK07041 1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGGGAPVRTAALDITDEAAVDAFFAEAGPFDHVVITAADT 80 (230)
T ss_pred CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHhcCCCCEEEECCCCC
Confidence 6999999999999999999999999999987653321 1 34688999999999999888864 6999987431
Q ss_pred ---h----------------------HhhhhhhcCCCEEEEEcccccccCCCCcccccchHHHHHHHHHHHHHH----h-
Q 021928 173 ---F----------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLM----A- 222 (305)
Q Consensus 173 ---~----------------------~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~~~~~~aE~~l~----~- 222 (305)
. +..+....+.++||++||..++.+.+....|...+. ..+.+.+ +
T Consensus 81 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~~sK~-----a~~~~~~~la~e~ 155 (230)
T PRK07041 81 PGGPVRALPLAAAQAAMDSKFWGAYRVARAARIAPGGSLTFVSGFAAVRPSASGVLQGAINA-----ALEALARGLALEL 155 (230)
T ss_pred CCCChhhCCHHHHHHHHHHHHHHHHHHHhhhhhcCCeEEEEECchhhcCCCCcchHHHHHHH-----HHHHHHHHHHHHh
Confidence 0 111222335679999999988766555544543222 1122221 1
Q ss_pred CCCCEEEEecCCcccCCCC----C--cce-e-eecCCCCCCccCHHHHHHHHHHHhhCCCCCCcEEEEecCC
Q 021928 223 SGIPYTIIRTGVLQNTPGG----K--QGF-Q-FEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVVNGE 286 (305)
Q Consensus 223 ~gi~~tilRPg~l~~~~~~----~--~~~-~-~~~~~~~~~~Is~~DvA~~iv~~l~~~~~~~~~~~v~~g~ 286 (305)
.+++++.++||++...... . ... . ............++|+|++++.++.++...++.|++.+|.
T Consensus 156 ~~irv~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~G~~~~v~gg~ 227 (230)
T PRK07041 156 APVRVNTVSPGLVDTPLWSKLAGDAREAMFAAAAERLPARRVGQPEDVANAILFLAANGFTTGSTVLVDGGH 227 (230)
T ss_pred hCceEEEEeecccccHHHHhhhccchHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhcCCCcCCcEEEeCCCe
Confidence 3588999999986432110 0 000 0 0000111234578999999999998765678999988764
|
|
| >PRK06057 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.53 E-value=5.7e-13 Score=119.22 Aligned_cols=190 Identities=12% Similarity=0.020 Sum_probs=118.9
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcC-CCcEEeecCCCCHHHHHHHhc-------CccEEEE
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG-TYVESMAGDASNKKFLKTALR-------GVRSIIC 168 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~-~~v~~v~~D~~d~~~~~~~~~-------~~d~Vi~ 168 (305)
.+++|+||||+|+||++++++|+++|++|++++|++.+..+... ....++.+|+.|.+++.++++ .+|+|||
T Consensus 6 ~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~ 85 (255)
T PRK06057 6 AGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVGGLFVPTDVTDEDAVNALFDTAAETYGSVDIAFN 85 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCcEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 35899999999999999999999999999999998765322111 123688999999988887775 4699998
Q ss_pred CCcch--------------------------------HhhhhhhcCCCEEEEEcccccccC-CCCcccccchHHH--HHH
Q 021928 169 PSEGF--------------------------------ISNAGSLKGVQHVILLSQLSVYRG-SGGIQALMKGNAR--KLA 213 (305)
Q Consensus 169 ~~~g~--------------------------------~~~~a~~~gv~~~V~iSS~~~~~~-~~~~~~~~~~~~~--~~~ 213 (305)
+++.. +....++.+..++|++||.....+ ..+...|...++. .+.
T Consensus 86 ~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~~sS~~~~~g~~~~~~~Y~~sKaal~~~~ 165 (255)
T PRK06057 86 NAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQGKGSIINTASFVAVMGSATSQISYTASKGGVLAMS 165 (255)
T ss_pred CCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhCCcEEEEEcchhhccCCCCCCcchHHHHHHHHHHH
Confidence 74310 011122345568999988654332 2233344333221 111
Q ss_pred HHHHHHHHhCCCCEEEEecCCcccCCCCCc----ceeee---cCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEEEEec
Q 021928 214 EQDESMLMASGIPYTIIRTGVLQNTPGGKQ----GFQFE---EGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVN 284 (305)
Q Consensus 214 ~~aE~~l~~~gi~~tilRPg~l~~~~~~~~----~~~~~---~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~v~~ 284 (305)
+.....+...++.++.++||++........ ..... .......+.+++|+|+++..++.+.. ..+..+.+.+
T Consensus 166 ~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~~~ 245 (255)
T PRK06057 166 RELGVQFARQGIRVNALCPGPVNTPLLQELFAKDPERAARRLVHVPMGRFAEPEEIAAAVAFLASDDASFITASTFLVDG 245 (255)
T ss_pred HHHHHHHHhhCcEEEEEeeCCcCCchhhhhccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccCcEEEECC
Confidence 112223345689999999999753321100 00000 00012346789999999998886543 3577887776
Q ss_pred CC
Q 021928 285 GE 286 (305)
Q Consensus 285 g~ 286 (305)
|.
T Consensus 246 g~ 247 (255)
T PRK06057 246 GI 247 (255)
T ss_pred Ce
Confidence 53
|
|
| >PRK08936 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.53 E-value=1.2e-12 Score=117.58 Aligned_cols=190 Identities=13% Similarity=0.076 Sum_probs=122.2
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcch-hh---h---hcCCCcEEeecCCCCHHHHHHHhc-------C
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-AM---E---SFGTYVESMAGDASNKKFLKTALR-------G 162 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~-~~---~---~~~~~v~~v~~D~~d~~~~~~~~~-------~ 162 (305)
..++++||||+|+||++++++|+++|++|+++.|+... .. + ..+.++.++.+|++|.+++.++++ .
T Consensus 6 ~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~ 85 (261)
T PRK08936 6 EGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKEFGT 85 (261)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 46899999999999999999999999999998885432 11 1 123457789999999888776654 4
Q ss_pred ccEEEECCcc-----h-------------------------HhhhhhhcC-CCEEEEEcccccccCCCCcccccchHHH-
Q 021928 163 VRSIICPSEG-----F-------------------------ISNAGSLKG-VQHVILLSQLSVYRGSGGIQALMKGNAR- 210 (305)
Q Consensus 163 ~d~Vi~~~~g-----~-------------------------~~~~a~~~g-v~~~V~iSS~~~~~~~~~~~~~~~~~~~- 210 (305)
+|++||+++. . +...+.+.+ -.++|++||...+.+......|...++.
T Consensus 86 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sKaa~ 165 (261)
T PRK08936 86 LDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQIPWPLFVHYAASKGGV 165 (261)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEccccccCCCCCCcccHHHHHHH
Confidence 7999988331 0 011123333 3689999998776655555555543321
Q ss_pred -HHHHHHHHHHHhCCCCEEEEecCCcccCCCCCc---ce---eeecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEEE
Q 021928 211 -KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQ---GF---QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFE 281 (305)
Q Consensus 211 -~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~~---~~---~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~ 281 (305)
.+.+.....+...++.++.|+||++........ .. .+..........+.+|+|+.+..++..+. ..+..+.
T Consensus 166 ~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~ 245 (261)
T PRK08936 166 KLMTETLAMEYAPKGIRVNNIGPGAINTPINAEKFADPKQRADVESMIPMGYIGKPEEIAAVAAWLASSEASYVTGITLF 245 (261)
T ss_pred HHHHHHHHHHHhhcCeEEEEEEECcCCCCccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCcccCCccCcEEE
Confidence 122222233455799999999998653321110 00 00011122346788999999999987543 3567777
Q ss_pred EecCC
Q 021928 282 VVNGE 286 (305)
Q Consensus 282 v~~g~ 286 (305)
+.+|.
T Consensus 246 ~d~g~ 250 (261)
T PRK08936 246 ADGGM 250 (261)
T ss_pred ECCCc
Confidence 76653
|
|
| >PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.53 E-value=6.2e-13 Score=118.99 Aligned_cols=190 Identities=14% Similarity=0.111 Sum_probs=122.1
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcch-h-h--hhcCCCcEEeecCCCCHHHHHHHhc-------Ccc
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-A-M--ESFGTYVESMAGDASNKKFLKTALR-------GVR 164 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~-~-~--~~~~~~v~~v~~D~~d~~~~~~~~~-------~~d 164 (305)
..+++++||||+|+||++++++|++.|++|+++.|.... . . ...+.++.++.+|++|.+++.++++ .+|
T Consensus 8 l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~D 87 (253)
T PRK08993 8 LEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEPTETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAEFGHID 87 (253)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcchHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence 346899999999999999999999999999988775422 1 1 1123457889999999888877665 579
Q ss_pred EEEECCcch--------------------------Hhhh----hhhcC-CCEEEEEcccccccCCCCcccccchHHH--H
Q 021928 165 SIICPSEGF--------------------------ISNA----GSLKG-VQHVILLSQLSVYRGSGGIQALMKGNAR--K 211 (305)
Q Consensus 165 ~Vi~~~~g~--------------------------~~~~----a~~~g-v~~~V~iSS~~~~~~~~~~~~~~~~~~~--~ 211 (305)
++||+++.. +..+ ..+.+ -.++|++||..++.+......|...++. .
T Consensus 88 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaa~~~ 167 (253)
T PRK08993 88 ILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGIRVPSYTASKSGVMG 167 (253)
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhccCCCCCcchHHHHHHHHH
Confidence 999884310 1111 11222 2589999998877665554555443321 1
Q ss_pred HHHHHHHHHHhCCCCEEEEecCCcccCCCCC----cce--eeecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEEEEe
Q 021928 212 LAEQDESMLMASGIPYTIIRTGVLQNTPGGK----QGF--QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVV 283 (305)
Q Consensus 212 ~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~----~~~--~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~v~ 283 (305)
+.+.....+...++.++.++||++....... ... .+........+..++|+|..++.++.+.. ..|+++.+.
T Consensus 168 ~~~~la~e~~~~gi~v~~v~pG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~eva~~~~~l~s~~~~~~~G~~~~~d 247 (253)
T PRK08993 168 VTRLMANEWAKHNINVNAIAPGYMATNNTQQLRADEQRSAEILDRIPAGRWGLPSDLMGPVVFLASSASDYINGYTIAVD 247 (253)
T ss_pred HHHHHHHHhhhhCeEEEEEeeCcccCcchhhhccchHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccCcEEEEC
Confidence 1122222244578999999999975432110 000 00011122347789999999999997543 357777776
Q ss_pred cC
Q 021928 284 NG 285 (305)
Q Consensus 284 ~g 285 (305)
+|
T Consensus 248 gg 249 (253)
T PRK08993 248 GG 249 (253)
T ss_pred CC
Confidence 55
|
|
| >PRK06924 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.53 E-value=2.1e-13 Score=121.41 Aligned_cols=186 Identities=16% Similarity=0.129 Sum_probs=115.3
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcch-hh---hhcCCCcEEeecCCCCHHHHHHHhcCc---------c
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-AM---ESFGTYVESMAGDASNKKFLKTALRGV---------R 164 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~-~~---~~~~~~v~~v~~D~~d~~~~~~~~~~~---------d 164 (305)
+|+|+||||+|+||++++++|+++|++|++++|++.+ .. +..+.+++++.+|++|.++++++++.+ +
T Consensus 1 ~k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~ 80 (251)
T PRK06924 1 MRYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLAEQYNSNLTFHSLDLQDVHELETNFNEILSSIQEDNVS 80 (251)
T ss_pred CcEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHHHhccCCceEEEEecCCCHHHHHHHHHHHHHhcCcccCC
Confidence 3789999999999999999999999999999998733 21 122346889999999998888777533 2
Q ss_pred --EEEECCcch-------------------------------Hhhhhhh-cCCCEEEEEcccccccCCCCcccccchHHH
Q 021928 165 --SIICPSEGF-------------------------------ISNAGSL-KGVQHVILLSQLSVYRGSGGIQALMKGNAR 210 (305)
Q Consensus 165 --~Vi~~~~g~-------------------------------~~~~a~~-~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~ 210 (305)
.+|++++.. +...+++ .+.++||++||..+..+......|...+..
T Consensus 81 ~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sKaa 160 (251)
T PRK06924 81 SIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAAKNPYFGWSAYCSSKAG 160 (251)
T ss_pred ceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhhcCCCCCcHHHhHHHHH
Confidence 455542210 0111222 235689999998776665555555443321
Q ss_pred H--HHH--HHHHHHHhCCCCEEEEecCCcccCCCC----Ccceeee------cCCCCCCccCHHHHHHHHHHHhhCCC-C
Q 021928 211 K--LAE--QDESMLMASGIPYTIIRTGVLQNTPGG----KQGFQFE------EGCAANGSLSKEDAAFICVEALESIP-Q 275 (305)
Q Consensus 211 ~--~~~--~aE~~l~~~gi~~tilRPg~l~~~~~~----~~~~~~~------~~~~~~~~Is~~DvA~~iv~~l~~~~-~ 275 (305)
- +.+ ..|...+..++.+..|+||++...... .....+. .......+.+++|+|+.++.++.++. .
T Consensus 161 ~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~ 240 (251)
T PRK06924 161 LDMFTQTVATEQEEEEYPVKIVAFSPGVMDTNMQAQIRSSSKEDFTNLDRFITLKEEGKLLSPEYVAKALRNLLETEDFP 240 (251)
T ss_pred HHHHHHHHHHHhhhcCCCeEEEEecCCccccHhHHHHHhcCcccchHHHHHHHHhhcCCcCCHHHHHHHHHHHHhcccCC
Confidence 1 111 111112345799999999986532210 0000000 00012346899999999999998633 4
Q ss_pred CCcEEEEe
Q 021928 276 TGLIFEVV 283 (305)
Q Consensus 276 ~~~~~~v~ 283 (305)
.|+.+.+.
T Consensus 241 ~G~~~~v~ 248 (251)
T PRK06924 241 NGEVIDID 248 (251)
T ss_pred CCCEeehh
Confidence 46655543
|
|
| >PRK07023 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.53 E-value=1.9e-13 Score=121.29 Aligned_cols=172 Identities=15% Similarity=0.128 Sum_probs=112.1
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhh-hhcCCCcEEeecCCCCHHHHHHHhc-----------CccE
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM-ESFGTYVESMAGDASNKKFLKTALR-----------GVRS 165 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~-~~~~~~v~~v~~D~~d~~~~~~~~~-----------~~d~ 165 (305)
+|+++||||+|+||++++++|+++|++|++++|+..+.. ...+.++.++.+|+.|.+++.+++. ..|.
T Consensus 1 ~~~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (243)
T PRK07023 1 AVRAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPSLAAAAGERLAEVELDLSDAAAAAAWLAGDLLAAFVDGASRVL 80 (243)
T ss_pred CceEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchhhhhccCCeEEEEEeccCCHHHHHHHHHHHHHHHhccCCCceE
Confidence 478999999999999999999999999999999865422 2234468899999999988877442 3578
Q ss_pred EEECCcc-----h--------------------------HhhhhhhcCCCEEEEEcccccccCCCCcccccchHHHHHHH
Q 021928 166 IICPSEG-----F--------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAE 214 (305)
Q Consensus 166 Vi~~~~g-----~--------------------------~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~~~~~ 214 (305)
+||+++. . +...+.+.+.++||++||..++.+..+...|...+.
T Consensus 81 ~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~----- 155 (243)
T PRK07023 81 LINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAERRILHISSGAARNAYAGWSVYCATKA----- 155 (243)
T ss_pred EEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCCEEEEEeChhhcCCCCCchHHHHHHH-----
Confidence 8887321 0 111223345679999999987766555555543321
Q ss_pred HHHHHH------HhCCCCEEEEecCCcccCCC-----CC-ccee----eecCCCCCCccCHHHHHHHHHHHhhCCC
Q 021928 215 QDESML------MASGIPYTIIRTGVLQNTPG-----GK-QGFQ----FEEGCAANGSLSKEDAAFICVEALESIP 274 (305)
Q Consensus 215 ~aE~~l------~~~gi~~tilRPg~l~~~~~-----~~-~~~~----~~~~~~~~~~Is~~DvA~~iv~~l~~~~ 274 (305)
..|.++ ...+++++.++||++..... .. .... +..-......+.++|+|..++..+..+.
T Consensus 156 a~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~~l~~~~ 231 (243)
T PRK07023 156 ALDHHARAVALDANRALRIVSLAPGVVDTGMQATIRATDEERFPMRERFRELKASGALSTPEDAARRLIAYLLSDD 231 (243)
T ss_pred HHHHHHHHHHhcCCCCcEEEEecCCccccHHHHHHHhcccccchHHHHHHHhhhcCCCCCHHHHHHHHHHHHhccc
Confidence 222222 23589999999998643211 00 0000 0000112346789999998777776654
|
|
| >PRK06123 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.53 E-value=8.7e-13 Score=117.14 Aligned_cols=188 Identities=15% Similarity=0.170 Sum_probs=114.8
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcC-cchhhh------hcCCCcEEeecCCCCHHHHHHHhc-------Cc
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKD-KRNAME------SFGTYVESMAGDASNKKFLKTALR-------GV 163 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~-~~~~~~------~~~~~v~~v~~D~~d~~~~~~~~~-------~~ 163 (305)
+++++||||+|+||++++++|+++|++|+++.++ ++...+ ..+.++.++.+|++|.+++.++++ .+
T Consensus 2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 81 (248)
T PRK06123 2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRELGRL 81 (248)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHhCCC
Confidence 4789999999999999999999999998877644 322111 123457889999999988887765 57
Q ss_pred cEEEECCcch---------------------------Hhhhh-hh---c--C-CCEEEEEcccccccCCCC-cccccchH
Q 021928 164 RSIICPSEGF---------------------------ISNAG-SL---K--G-VQHVILLSQLSVYRGSGG-IQALMKGN 208 (305)
Q Consensus 164 d~Vi~~~~g~---------------------------~~~~a-~~---~--g-v~~~V~iSS~~~~~~~~~-~~~~~~~~ 208 (305)
|+|||+++.. +...+ .. . + -.+||++||..+..+... ...|...+
T Consensus 82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~Y~~sK 161 (248)
T PRK06123 82 DALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLGSPGEYIDYAASK 161 (248)
T ss_pred CEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcCCCCCCccchHHHH
Confidence 9999883210 01111 11 1 1 246999999866544332 22344332
Q ss_pred HH--HHHHHHHHHHHhCCCCEEEEecCCcccCCCCC--ccee---eecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcE
Q 021928 209 AR--KLAEQDESMLMASGIPYTIIRTGVLQNTPGGK--QGFQ---FEEGCAANGSLSKEDAAFICVEALESIP--QTGLI 279 (305)
Q Consensus 209 ~~--~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~--~~~~---~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~ 279 (305)
+. .+.+.....+...+++++++|||.+....... .... +..........+++|+|++++.++.... ..++.
T Consensus 162 aa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~d~a~~~~~l~~~~~~~~~g~~ 241 (248)
T PRK06123 162 GAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEIHASGGEPGRVDRVKAGIPMGRGGTAEEVARAILWLLSDEASYTTGTF 241 (248)
T ss_pred HHHHHHHHHHHHHhcccCeEEEEEecCcccCchhhccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccCCE
Confidence 21 11111112234468999999999965432110 0000 0001111223478999999999987543 45789
Q ss_pred EEEecC
Q 021928 280 FEVVNG 285 (305)
Q Consensus 280 ~~v~~g 285 (305)
|++.++
T Consensus 242 ~~~~gg 247 (248)
T PRK06123 242 IDVSGG 247 (248)
T ss_pred EeecCC
Confidence 998765
|
|
| >PRK06500 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.53 E-value=6e-13 Score=118.14 Aligned_cols=190 Identities=15% Similarity=0.131 Sum_probs=116.6
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh---hcCCCcEEeecCCCCHHHHHHHh-------cCccEE
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTAL-------RGVRSI 166 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~---~~~~~v~~v~~D~~d~~~~~~~~-------~~~d~V 166 (305)
++++|+||||+|+||++++++|+++|++|++++|+.+...+ ..+.++.++.+|+.|.+++..++ .++|++
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 84 (249)
T PRK06500 5 QGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQALAEAFGRLDAV 84 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 35899999999999999999999999999999998655322 23446788999999987665443 367999
Q ss_pred EECCcc----h----------------------Hhhhhhh--cCCCEEEEEcccccccCCCCcccccchHHH--HHHHHH
Q 021928 167 ICPSEG----F----------------------ISNAGSL--KGVQHVILLSQLSVYRGSGGIQALMKGNAR--KLAEQD 216 (305)
Q Consensus 167 i~~~~g----~----------------------~~~~a~~--~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~--~~~~~a 216 (305)
||+++. . +.+++.. ....++|++||.....+......|...+.. .+.+..
T Consensus 85 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~i~~~S~~~~~~~~~~~~Y~~sK~a~~~~~~~l 164 (249)
T PRK06500 85 FINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLANPASIVLNGSINAHIGMPNSSVYAASKAALLSLAKTL 164 (249)
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEechHhccCCCCccHHHHHHHHHHHHHHHH
Confidence 988431 0 1112211 123578888776554443333444332211 111111
Q ss_pred HHHHHhCCCCEEEEecCCcccCCCC----Ccc-ee-----eecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEEEEec
Q 021928 217 ESMLMASGIPYTIIRTGVLQNTPGG----KQG-FQ-----FEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVN 284 (305)
Q Consensus 217 E~~l~~~gi~~tilRPg~l~~~~~~----~~~-~~-----~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~v~~ 284 (305)
...+...++++++++||.+...... ... .. +........+.+.+|+|++++.++.++. ..+..+.+.+
T Consensus 165 a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~i~~~g 244 (249)
T PRK06500 165 SGELLPRGIRVNAVSPGPVQTPLYGKLGLPEATLDAVAAQIQALVPLGRFGTPEEIAKAVLYLASDESAFIVGSEIIVDG 244 (249)
T ss_pred HHHhhhcCeEEEEEeeCcCCCHHHHhhccCccchHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCccCCeEEECC
Confidence 1122346899999999986432110 000 00 0001112235688999999999987544 3567777776
Q ss_pred CC
Q 021928 285 GE 286 (305)
Q Consensus 285 g~ 286 (305)
|.
T Consensus 245 g~ 246 (249)
T PRK06500 245 GM 246 (249)
T ss_pred Cc
Confidence 64
|
|
| >PRK09730 putative NAD(P)-binding oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.52 E-value=2.6e-13 Score=120.27 Aligned_cols=188 Identities=16% Similarity=0.165 Sum_probs=114.7
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEE-EcCcchhhh------hcCCCcEEeecCCCCHHHHHHHhcC-------c
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKAL-VKDKRNAME------SFGTYVESMAGDASNKKFLKTALRG-------V 163 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~-~R~~~~~~~------~~~~~v~~v~~D~~d~~~~~~~~~~-------~ 163 (305)
+++++||||+|+||++++++|+++|++|+++ .|++++..+ ..+.++.++.+|+.|.+++.++++. +
T Consensus 1 ~~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~i 80 (247)
T PRK09730 1 MAIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDEPL 80 (247)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhCCCC
Confidence 4789999999999999999999999999875 465543221 1234578899999999888877664 5
Q ss_pred cEEEECCcch---------------------------Hhhh-----hhh--cCCCEEEEEcccccccCCCC-cccccchH
Q 021928 164 RSIICPSEGF---------------------------ISNA-----GSL--KGVQHVILLSQLSVYRGSGG-IQALMKGN 208 (305)
Q Consensus 164 d~Vi~~~~g~---------------------------~~~~-----a~~--~gv~~~V~iSS~~~~~~~~~-~~~~~~~~ 208 (305)
|.|||+++.. +... .+. ...++||++||..++.+... ...|...+
T Consensus 81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~~~~~~~~Y~~sK 160 (247)
T PRK09730 81 AALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLGAPGEYVDYAASK 160 (247)
T ss_pred CEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhccCCCCcccchHhHH
Confidence 7999884310 0000 111 12357999999876544332 22343322
Q ss_pred HH--HHHHHHHHHHHhCCCCEEEEecCCcccCCCCC---cce--eeecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcE
Q 021928 209 AR--KLAEQDESMLMASGIPYTIIRTGVLQNTPGGK---QGF--QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLI 279 (305)
Q Consensus 209 ~~--~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~---~~~--~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~ 279 (305)
.. .+.+.....+...+++++++|||++....... ... ............+++|+|++++.++.++. ..+..
T Consensus 161 ~~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~~~~~~g~~ 240 (247)
T PRK09730 161 GAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMHASGGEPGRVDRVKSNIPMQRGGQPEEVAQAIVWLLSDKASYVTGSF 240 (247)
T ss_pred HHHHHHHHHHHHHHHHhCeEEEEEEeCCCcCcccccCCCHHHHHHHHhcCCCCCCcCHHHHHHHHHhhcChhhcCccCcE
Confidence 21 11111222234578999999999965432111 000 00001111223478999999999887543 45677
Q ss_pred EEEecC
Q 021928 280 FEVVNG 285 (305)
Q Consensus 280 ~~v~~g 285 (305)
+++.++
T Consensus 241 ~~~~g~ 246 (247)
T PRK09730 241 IDLAGG 246 (247)
T ss_pred EecCCC
Confidence 777654
|
|
| >PRK12742 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.52 E-value=6.2e-13 Score=117.29 Aligned_cols=189 Identities=13% Similarity=0.146 Sum_probs=117.3
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcC-cchhhhhc-CCCcEEeecCCCCHHHHHHHhc---CccEEEECCc
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKD-KRNAMESF-GTYVESMAGDASNKKFLKTALR---GVRSIICPSE 171 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~-~~~~~~~~-~~~v~~v~~D~~d~~~~~~~~~---~~d~Vi~~~~ 171 (305)
++++|+||||+|+||++++++|+++|++|+++.|+ .+...+.. ..++.++.+|++|.+++.++++ .+|++|++++
T Consensus 5 ~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~li~~ag 84 (237)
T PRK12742 5 TGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQETGATAVQTDSADRDAVIDVVRKSGALDILVVNAG 84 (237)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHhCCeEEecCCCCHHHHHHHHHHhCCCcEEEECCC
Confidence 35899999999999999999999999999887664 33322211 1246788999999888877664 4799998843
Q ss_pred ch--------------------------H-hhhhhh-cCCCEEEEEcccccc-cCCCCcccccchHHH--HHHHHHHHHH
Q 021928 172 GF--------------------------I-SNAGSL-KGVQHVILLSQLSVY-RGSGGIQALMKGNAR--KLAEQDESML 220 (305)
Q Consensus 172 g~--------------------------~-~~~a~~-~gv~~~V~iSS~~~~-~~~~~~~~~~~~~~~--~~~~~aE~~l 220 (305)
.. + ..++.. .+..++|++||.... .+..+...|...++. .+.+.....+
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~~~ 164 (237)
T PRK12742 85 IAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVNGDRMPVAGMAAYAASKSALQGMARGLARDF 164 (237)
T ss_pred CCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEeccccccCCCCCCcchHHhHHHHHHHHHHHHHHH
Confidence 10 0 011111 134689999998663 233344444433321 1111111223
Q ss_pred HhCCCCEEEEecCCcccCCCCCc-ce--eeecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEEEEecC
Q 021928 221 MASGIPYTIIRTGVLQNTPGGKQ-GF--QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVNG 285 (305)
Q Consensus 221 ~~~gi~~tilRPg~l~~~~~~~~-~~--~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~v~~g 285 (305)
...++.++.|+||.+........ .. ..........+.+++|+|+++..++.+.. ..|..+.+.+|
T Consensus 165 ~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~l~s~~~~~~~G~~~~~dgg 234 (237)
T PRK12742 165 GPRGITINVVQPGPIDTDANPANGPMKDMMHSFMAIKRHGRPEEVAGMVAWLAGPEASFVTGAMHTIDGA 234 (237)
T ss_pred hhhCeEEEEEecCcccCCccccccHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCcccCcccCCEEEeCCC
Confidence 45789999999999754321111 00 00001112346789999999999987543 36777877655
|
|
| >PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.52 E-value=5.7e-13 Score=119.83 Aligned_cols=187 Identities=14% Similarity=0.145 Sum_probs=122.7
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhc-------CccEEEEC
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR-------GVRSIICP 169 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~-------~~d~Vi~~ 169 (305)
.+++++||||+|+||++++++|+++|++|+++.|++.... ..++.++.+|++|.+++.++++ .+|.+||+
T Consensus 8 ~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~ 84 (266)
T PRK06171 8 QGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQ---HENYQFVPTDVSSAEEVNHTVAEIIEKFGRIDGLVNN 84 (266)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCccccc---cCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 4589999999999999999999999999999999875432 2357889999999988877654 46999987
Q ss_pred Ccch-----------------------------------Hhhh----hhhcCCCEEEEEcccccccCCCCcccccchHHH
Q 021928 170 SEGF-----------------------------------ISNA----GSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR 210 (305)
Q Consensus 170 ~~g~-----------------------------------~~~~----a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~ 210 (305)
++.. +..+ ..+.+-.+||++||.....+......|...+..
T Consensus 85 Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a 164 (266)
T PRK06171 85 AGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAGLEGSEGQSCYAATKAA 164 (266)
T ss_pred CcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEccccccCCCCCCchhHHHHHH
Confidence 4310 0011 122344689999998877655555555443321
Q ss_pred --HHHHHHHHHHHhCCCCEEEEecCCccc-CCCC---Ccce-------------eeec--CCCCCCccCHHHHHHHHHHH
Q 021928 211 --KLAEQDESMLMASGIPYTIIRTGVLQN-TPGG---KQGF-------------QFEE--GCAANGSLSKEDAAFICVEA 269 (305)
Q Consensus 211 --~~~~~aE~~l~~~gi~~tilRPg~l~~-~~~~---~~~~-------------~~~~--~~~~~~~Is~~DvA~~iv~~ 269 (305)
.+.+.....+...+++++.|+||.+.. .... .... .+.. ......+..++|||.++..+
T Consensus 165 ~~~l~~~la~e~~~~gi~v~~v~pG~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~eva~~~~fl 244 (266)
T PRK06171 165 LNSFTRSWAKELGKHNIRVVGVAPGILEATGLRTPEYEEALAYTRGITVEQLRAGYTKTSTIPLGRSGKLSEVADLVCYL 244 (266)
T ss_pred HHHHHHHHHHHhhhcCeEEEEEeccccccCCCcChhhhhhhccccCCCHHHHHhhhcccccccCCCCCCHHHhhhheeee
Confidence 111222223345799999999998642 1110 0000 0000 11223456789999999999
Q ss_pred hhCCC--CCCcEEEEecCC
Q 021928 270 LESIP--QTGLIFEVVNGE 286 (305)
Q Consensus 270 l~~~~--~~~~~~~v~~g~ 286 (305)
+.... -.++++.+.+|.
T Consensus 245 ~s~~~~~itG~~i~vdgg~ 263 (266)
T PRK06171 245 LSDRASYITGVTTNIAGGK 263 (266)
T ss_pred eccccccceeeEEEecCcc
Confidence 97544 357888887653
|
|
| >PRK07069 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.52 E-value=5.7e-13 Score=118.41 Aligned_cols=186 Identities=9% Similarity=0.077 Sum_probs=116.8
Q ss_pred EEEEEcCCChHHHHHHHHHHhCCCeEEEEEcC-cchhhh---hc----C-CCcEEeecCCCCHHHHHHHhc-------Cc
Q 021928 100 AVLVTDGDSDIGQMVILSLIVKRTRIKALVKD-KRNAME---SF----G-TYVESMAGDASNKKFLKTALR-------GV 163 (305)
Q Consensus 100 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~-~~~~~~---~~----~-~~v~~v~~D~~d~~~~~~~~~-------~~ 163 (305)
+|+||||+|+||++++++|+++|++|+++.|+ .+...+ .+ . ..+..+.+|+.|.+++.++++ ++
T Consensus 1 ~ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 80 (251)
T PRK07069 1 RAFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGL 80 (251)
T ss_pred CEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCc
Confidence 48999999999999999999999999999998 433221 11 1 124467899999888766554 57
Q ss_pred cEEEECCcc----h--------------------------HhhhhhhcCCCEEEEEcccccccCCCCcccccchHHH--H
Q 021928 164 RSIICPSEG----F--------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--K 211 (305)
Q Consensus 164 d~Vi~~~~g----~--------------------------~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~--~ 211 (305)
|.|||+++. . +...+++.+.++||++||..++.+......|...+.. .
T Consensus 81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~ss~~~~~~~~~~~~Y~~sK~a~~~ 160 (251)
T PRK07069 81 SVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQPASIVNISSVAAFKAEPDYTAYNASKAAVAS 160 (251)
T ss_pred cEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEecChhhccCCCCCchhHHHHHHHHH
Confidence 999988431 0 1122344567899999999887665555555443321 1
Q ss_pred HHHHHHHHHHh--CCCCEEEEecCCcccCCCCC------cce---eeecCCCCCCccCHHHHHHHHHHHhhCCC--CCCc
Q 021928 212 LAEQDESMLMA--SGIPYTIIRTGVLQNTPGGK------QGF---QFEEGCAANGSLSKEDAAFICVEALESIP--QTGL 278 (305)
Q Consensus 212 ~~~~aE~~l~~--~gi~~tilRPg~l~~~~~~~------~~~---~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~ 278 (305)
+.+.....+.. .+++++.++||++....... ... .+........+.+++|+|.+++.++..+. ..|+
T Consensus 161 ~~~~la~e~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~ 240 (251)
T PRK07069 161 LTKSIALDCARRGLDVRCNSIHPTFIRTGIVDPIFQRLGEEEATRKLARGVPLGRLGEPDDVAHAVLYLASDESRFVTGA 240 (251)
T ss_pred HHHHHHHHhcccCCcEEEEEEeecccCCcchhHHhhhccchhHHHHHhccCCCCCCcCHHHHHHHHHHHcCccccCccCC
Confidence 11111122222 35888999999864332110 000 00011122345689999999999886543 3567
Q ss_pred EEEEecC
Q 021928 279 IFEVVNG 285 (305)
Q Consensus 279 ~~~v~~g 285 (305)
.+.+.+|
T Consensus 241 ~i~~~~g 247 (251)
T PRK07069 241 ELVIDGG 247 (251)
T ss_pred EEEECCC
Confidence 7777655
|
|
| >PRK08278 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.52 E-value=1.5e-12 Score=118.07 Aligned_cols=176 Identities=15% Similarity=0.114 Sum_probs=111.9
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchh-------h------hhcCCCcEEeecCCCCHHHHHHHhc--
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-------M------ESFGTYVESMAGDASNKKFLKTALR-- 161 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~-------~------~~~~~~v~~v~~D~~d~~~~~~~~~-- 161 (305)
.+++++||||+|+||++++++|+++|++|+++.|+.+.. . ...+.++.++.+|+++.+++.++++
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~ 84 (273)
T PRK08278 5 SGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVAKA 84 (273)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHH
Confidence 458999999999999999999999999999999976421 0 1123467889999999988877665
Q ss_pred -----CccEEEECCcch--------------------------Hhhh----hhhcCCCEEEEEcccccccCC--CCcccc
Q 021928 162 -----GVRSIICPSEGF--------------------------ISNA----GSLKGVQHVILLSQLSVYRGS--GGIQAL 204 (305)
Q Consensus 162 -----~~d~Vi~~~~g~--------------------------~~~~----a~~~gv~~~V~iSS~~~~~~~--~~~~~~ 204 (305)
.+|.+||+++.. +..+ .++.+-.++|++||.....+. .+...|
T Consensus 85 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~Y 164 (273)
T PRK08278 85 VERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPPLNLDPKWFAPHTAY 164 (273)
T ss_pred HHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCchhccccccCCcchh
Confidence 579999884310 1111 222334589999887554443 333444
Q ss_pred cchHHH--HHHHHHHHHHHhCCCCEEEEecCCcccCCCCCcceeeecCCCCCCccCHHHHHHHHHHHhhCCC
Q 021928 205 MKGNAR--KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIP 274 (305)
Q Consensus 205 ~~~~~~--~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~~~~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~ 274 (305)
..+++. .+.+.....+...++.++.|.||...+...... . .........+.+++|+|+.++.++..+.
T Consensus 165 ~~sK~a~~~~~~~la~el~~~~I~v~~i~Pg~~i~t~~~~~-~-~~~~~~~~~~~~p~~va~~~~~l~~~~~ 234 (273)
T PRK08278 165 TMAKYGMSLCTLGLAEEFRDDGIAVNALWPRTTIATAAVRN-L-LGGDEAMRRSRTPEIMADAAYEILSRPA 234 (273)
T ss_pred HHHHHHHHHHHHHHHHHhhhcCcEEEEEeCCCccccHHHHh-c-ccccccccccCCHHHHHHHHHHHhcCcc
Confidence 433221 111112222344689999999995332221110 0 0011122346789999999999997644
|
|
| >PRK07832 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.52 E-value=8.3e-13 Score=119.43 Aligned_cols=175 Identities=17% Similarity=0.116 Sum_probs=110.5
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh------cC-CCcEEeecCCCCHHHHHHHhc-------Ccc
Q 021928 99 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FG-TYVESMAGDASNKKFLKTALR-------GVR 164 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~-~~v~~v~~D~~d~~~~~~~~~-------~~d 164 (305)
|+++||||+|+||++++++|+++|++|+++.|++++..+. .+ ..+.++.+|++|.+++.++++ ++|
T Consensus 1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 80 (272)
T PRK07832 1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSMD 80 (272)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence 5799999999999999999999999999999987553221 11 234567899999887765554 479
Q ss_pred EEEECCcch--------------------------Hhhh----hhh-cCCCEEEEEcccccccCCCCcccccchHH--HH
Q 021928 165 SIICPSEGF--------------------------ISNA----GSL-KGVQHVILLSQLSVYRGSGGIQALMKGNA--RK 211 (305)
Q Consensus 165 ~Vi~~~~g~--------------------------~~~~----a~~-~gv~~~V~iSS~~~~~~~~~~~~~~~~~~--~~ 211 (305)
+|||+++.. +..+ ..+ ....+||++||.....+.+....|..++. ..
T Consensus 81 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~a~~~ 160 (272)
T PRK07832 81 VVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGLVALPWHAAYSASKFGLRG 160 (272)
T ss_pred EEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccccCCCCCCcchHHHHHHHHH
Confidence 999884310 1111 111 23468999999876555444444443332 11
Q ss_pred HHHHHHHHHHhCCCCEEEEecCCcccCCCCC-c--ceeee-------cCCCCCCccCHHHHHHHHHHHhhCC
Q 021928 212 LAEQDESMLMASGIPYTIIRTGVLQNTPGGK-Q--GFQFE-------EGCAANGSLSKEDAAFICVEALESI 273 (305)
Q Consensus 212 ~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~-~--~~~~~-------~~~~~~~~Is~~DvA~~iv~~l~~~ 273 (305)
+.+.....+...++++++++||.+....... . ..... ........++++|+|+.++.++..+
T Consensus 161 ~~~~l~~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vA~~~~~~~~~~ 232 (272)
T PRK07832 161 LSEVLRFDLARHGIGVSVVVPGAVKTPLVNTVEIAGVDREDPRVQKWVDRFRGHAVTPEKAAEKILAGVEKN 232 (272)
T ss_pred HHHHHHHHhhhcCcEEEEEecCcccCcchhcccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHhcC
Confidence 2222223344678999999999965322110 0 00000 0011234589999999999999754
|
|
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.52 E-value=1.4e-12 Score=132.10 Aligned_cols=172 Identities=16% Similarity=0.204 Sum_probs=118.9
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh------cCCCcEEeecCCCCHHHHHHHhc-------Cc
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GV 163 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~~~v~~v~~D~~d~~~~~~~~~-------~~ 163 (305)
.+++++||||+|+||++++++|+++|++|++++|+++...+. .+.++.++.+|++|.+++.++++ .+
T Consensus 370 ~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i 449 (657)
T PRK07201 370 VGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAEHGHV 449 (657)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence 458999999999999999999999999999999987653321 23468899999999988887765 57
Q ss_pred cEEEECCcc----h----------------------------HhhhhhhcCCCEEEEEcccccccCCCCcccccchHH--
Q 021928 164 RSIICPSEG----F----------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA-- 209 (305)
Q Consensus 164 d~Vi~~~~g----~----------------------------~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~-- 209 (305)
|++|++++. . +...+++.+..+||++||.+++.+......|..++.
T Consensus 450 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~ 529 (657)
T PRK07201 450 DYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERRFGHVVNVSSIGVQTNAPRFSAYVASKAAL 529 (657)
T ss_pred CEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCCCcchHHHHHHHH
Confidence 999988431 0 011123456789999999988776555445544332
Q ss_pred HHHHHHHHHHHHhCCCCEEEEecCCcccCCCCCcceeeecCCCCCCccCHHHHHHHHHHHhhCC
Q 021928 210 RKLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESI 273 (305)
Q Consensus 210 ~~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~~~~~~~~~~~~~~~Is~~DvA~~iv~~l~~~ 273 (305)
..+.+.....+...++.++.|+||++........ ..+ .....++.+++|+.++..+...
T Consensus 530 ~~~~~~la~e~~~~~i~v~~v~pg~v~T~~~~~~-~~~----~~~~~~~~~~~a~~i~~~~~~~ 588 (657)
T PRK07201 530 DAFSDVAASETLSDGITFTTIHMPLVRTPMIAPT-KRY----NNVPTISPEEAADMVVRAIVEK 588 (657)
T ss_pred HHHHHHHHHHHHhhCCcEEEEECCcCcccccCcc-ccc----cCCCCCCHHHHHHHHHHHHHhC
Confidence 1112222223445799999999999653322111 001 1234689999999999988653
|
|
| >PRK08226 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.52 E-value=8.2e-13 Score=118.54 Aligned_cols=190 Identities=12% Similarity=0.092 Sum_probs=118.3
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhh---h--hcCCCcEEeecCCCCHHHHHHHhc-------Ccc
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM---E--SFGTYVESMAGDASNKKFLKTALR-------GVR 164 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~---~--~~~~~v~~v~~D~~d~~~~~~~~~-------~~d 164 (305)
.+++++||||+|+||++++++|+++|++|+++.|+..... + ..+.++.++.+|++|.+++.++++ .+|
T Consensus 5 ~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id 84 (263)
T PRK08226 5 TGKTALITGALQGIGEGIARVFARHGANLILLDISPEIEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGRID 84 (263)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 4589999999999999999999999999999999864211 1 113457889999999888877665 569
Q ss_pred EEEECCcc----h----------------------Hhhh----hhhcCCCEEEEEcccccc-cCCCCcccccchHHH--H
Q 021928 165 SIICPSEG----F----------------------ISNA----GSLKGVQHVILLSQLSVY-RGSGGIQALMKGNAR--K 211 (305)
Q Consensus 165 ~Vi~~~~g----~----------------------~~~~----a~~~gv~~~V~iSS~~~~-~~~~~~~~~~~~~~~--~ 211 (305)
.|||+++. . +... +.+.+..+||++||.... .+......|...+.. .
T Consensus 85 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~Y~~sK~a~~~ 164 (263)
T PRK08226 85 ILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMVADPGETAYALTKAAIVG 164 (263)
T ss_pred EEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhcccCCCCcchHHHHHHHHHH
Confidence 99987431 0 0111 223455789999987653 222233334332211 1
Q ss_pred HHHHHHHHHHhCCCCEEEEecCCcccCCCCC---------cc-e--eeecCCCCCCccCHHHHHHHHHHHhhCC--CCCC
Q 021928 212 LAEQDESMLMASGIPYTIIRTGVLQNTPGGK---------QG-F--QFEEGCAANGSLSKEDAAFICVEALESI--PQTG 277 (305)
Q Consensus 212 ~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~---------~~-~--~~~~~~~~~~~Is~~DvA~~iv~~l~~~--~~~~ 277 (305)
+.+.....+...+++++.|+||.+....... .. . .+........+.+++|+|+++..++... ...+
T Consensus 165 ~~~~la~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~~~~~l~~~~~~~~~g 244 (263)
T PRK08226 165 LTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNPEDPESVLTEMAKAIPLRRLADPLEVGELAAFLASDESSYLTG 244 (263)
T ss_pred HHHHHHHHhcccCcEEEEEecCcccCHHHHhhhhhccCCCcHHHHHHHhccCCCCCCCCHHHHHHHHHHHcCchhcCCcC
Confidence 1111111223468999999999864321100 00 0 0001112234568999999999988643 2467
Q ss_pred cEEEEecCC
Q 021928 278 LIFEVVNGE 286 (305)
Q Consensus 278 ~~~~v~~g~ 286 (305)
+.+.+.+|-
T Consensus 245 ~~i~~dgg~ 253 (263)
T PRK08226 245 TQNVIDGGS 253 (263)
T ss_pred ceEeECCCc
Confidence 888887663
|
|
| >PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.52 E-value=1.1e-12 Score=117.97 Aligned_cols=187 Identities=17% Similarity=0.146 Sum_probs=120.6
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh---hcCCCcEEeecCCCCHHHHHHHhc-------CccEE
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALR-------GVRSI 166 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~---~~~~~v~~v~~D~~d~~~~~~~~~-------~~d~V 166 (305)
++++++||||+|+||++++++|+++|++|+++.|++++..+ ..+.++.++.+|+.|.+++..+++ .+|++
T Consensus 5 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l 84 (263)
T PRK06200 5 HGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDAFGKLDCF 84 (263)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHhcCCCCEE
Confidence 35899999999999999999999999999999998765432 234467899999999888776654 57999
Q ss_pred EECCcc-----h------------H--------------hhh----hhhcCCCEEEEEcccccccCCCCcccccchHHHH
Q 021928 167 ICPSEG-----F------------I--------------SNA----GSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK 211 (305)
Q Consensus 167 i~~~~g-----~------------~--------------~~~----a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~~ 211 (305)
|++++- . + ... +++. -.++|++||...+.+..+...|...+..-
T Consensus 85 i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~g~iv~~sS~~~~~~~~~~~~Y~~sK~a~ 163 (263)
T PRK06200 85 VGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKAS-GGSMIFTLSNSSFYPGGGGPLYTASKHAV 163 (263)
T ss_pred EECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhc-CCEEEEECChhhcCCCCCCchhHHHHHHH
Confidence 988331 0 0 001 1122 25899999988776555544554433211
Q ss_pred --HHHHHHHHHHhCCCCEEEEecCCcccCCCCC-------ccee--------eecCCCCCCccCHHHHHHHHHHHhhCC-
Q 021928 212 --LAEQDESMLMASGIPYTIIRTGVLQNTPGGK-------QGFQ--------FEEGCAANGSLSKEDAAFICVEALESI- 273 (305)
Q Consensus 212 --~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~-------~~~~--------~~~~~~~~~~Is~~DvA~~iv~~l~~~- 273 (305)
+.+..-..+. .++.++.|.||++....... .... +...........++|+|.+++.++.+.
T Consensus 164 ~~~~~~la~el~-~~Irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~eva~~~~fl~s~~~ 242 (263)
T PRK06200 164 VGLVRQLAYELA-PKIRVNGVAPGGTVTDLRGPASLGQGETSISDSPGLADMIAAITPLQFAPQPEDHTGPYVLLASRRN 242 (263)
T ss_pred HHHHHHHHHHHh-cCcEEEEEeCCccccCCcCccccCCCCcccccccchhHHhhcCCCCCCCCCHHHHhhhhhheecccc
Confidence 1111111122 35999999999964322100 0000 000111234568899999999998755
Q ss_pred C--CCCcEEEEecC
Q 021928 274 P--QTGLIFEVVNG 285 (305)
Q Consensus 274 ~--~~~~~~~v~~g 285 (305)
. ..|+++.+.+|
T Consensus 243 ~~~itG~~i~vdgG 256 (263)
T PRK06200 243 SRALTGVVINADGG 256 (263)
T ss_pred cCcccceEEEEcCc
Confidence 3 46788888766
|
|
| >PRK06125 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=6.9e-13 Score=118.91 Aligned_cols=190 Identities=13% Similarity=0.101 Sum_probs=122.4
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh-------cCCCcEEeecCCCCHHHHHHHhc---CccEE
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------FGTYVESMAGDASNKKFLKTALR---GVRSI 166 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~-------~~~~v~~v~~D~~d~~~~~~~~~---~~d~V 166 (305)
.+++++||||+|+||++++++|+++|++|++++|++++..+. .+.++.++.+|++|.+++.++++ .+|.+
T Consensus 6 ~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id~l 85 (259)
T PRK06125 6 AGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAEAGDIDIL 85 (259)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHhCCCCEE
Confidence 358999999999999999999999999999999987653321 13467889999999988877664 57999
Q ss_pred EECCcch------------------------------HhhhhhhcCCCEEEEEcccccccCCCCcccccchHH--HHHHH
Q 021928 167 ICPSEGF------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA--RKLAE 214 (305)
Q Consensus 167 i~~~~g~------------------------------~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~--~~~~~ 214 (305)
|++++.. +....++.+-.++|++||.....+......|...+. ..+.+
T Consensus 86 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~ask~al~~~~~ 165 (259)
T PRK06125 86 VNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARGSGVIVNVIGAAGENPDADYICGSAGNAALMAFTR 165 (259)
T ss_pred EECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEecCccccCCCCCchHhHHHHHHHHHHHH
Confidence 9883310 011123344468999998876554333333322211 11112
Q ss_pred HHHHHHHhCCCCEEEEecCCcccCCC------CC-----cce---eeecCCCCCCccCHHHHHHHHHHHhhCCC--CCCc
Q 021928 215 QDESMLMASGIPYTIIRTGVLQNTPG------GK-----QGF---QFEEGCAANGSLSKEDAAFICVEALESIP--QTGL 278 (305)
Q Consensus 215 ~aE~~l~~~gi~~tilRPg~l~~~~~------~~-----~~~---~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~ 278 (305)
.....+...+++++.|+||.+..... .. ... .+........+.+++|+|++++.++.+.. ..|+
T Consensus 166 ~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~ 245 (259)
T PRK06125 166 ALGGKSLDDGVRVVGVNPGPVATDRMLTLLKGRARAELGDESRWQELLAGLPLGRPATPEEVADLVAFLASPRSGYTSGT 245 (259)
T ss_pred HHHHHhCccCeEEEEEecCccccHHHHHHHHhhhhcccCCHHHHHHHhccCCcCCCcCHHHHHHHHHHHcCchhccccCc
Confidence 22223445789999999999643210 00 000 00001112346789999999999987543 4678
Q ss_pred EEEEecCC
Q 021928 279 IFEVVNGE 286 (305)
Q Consensus 279 ~~~v~~g~ 286 (305)
.+.+.+|.
T Consensus 246 ~i~vdgg~ 253 (259)
T PRK06125 246 VVTVDGGI 253 (259)
T ss_pred eEEecCCe
Confidence 88887663
|
|
| >PRK12747 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=1.3e-12 Score=116.57 Aligned_cols=189 Identities=19% Similarity=0.129 Sum_probs=117.7
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEE-cCcchhhh------hcCCCcEEeecCCCCHHHHHHHhc---------
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALV-KDKRNAME------SFGTYVESMAGDASNKKFLKTALR--------- 161 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~-R~~~~~~~------~~~~~v~~v~~D~~d~~~~~~~~~--------- 161 (305)
+|+++||||+|+||++++++|++.|++|+++. |+.++..+ ..+..+..+.+|+.+.+++..+++
T Consensus 4 ~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 83 (252)
T PRK12747 4 GKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQNR 83 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhhhh
Confidence 58999999999999999999999999998875 44333221 113356788899998766553331
Q ss_pred ----CccEEEECCcc----h----------------------Hhhh-hhh-cCCCEEEEEcccccccCCCCcccccchHH
Q 021928 162 ----GVRSIICPSEG----F----------------------ISNA-GSL-KGVQHVILLSQLSVYRGSGGIQALMKGNA 209 (305)
Q Consensus 162 ----~~d~Vi~~~~g----~----------------------~~~~-a~~-~gv~~~V~iSS~~~~~~~~~~~~~~~~~~ 209 (305)
.+|++||+++. . +..+ ... .+..+||++||.....+......|..+++
T Consensus 84 ~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKa 163 (252)
T PRK12747 84 TGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRISLPDFIAYSMTKG 163 (252)
T ss_pred cCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCcccccCCCCchhHHHHHH
Confidence 58999988431 0 0111 111 12359999999988766555555544332
Q ss_pred H--HHHHHHHHHHHhCCCCEEEEecCCcccCCCCC---cce--ee-ecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcE
Q 021928 210 R--KLAEQDESMLMASGIPYTIIRTGVLQNTPGGK---QGF--QF-EEGCAANGSLSKEDAAFICVEALESIP--QTGLI 279 (305)
Q Consensus 210 ~--~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~---~~~--~~-~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~ 279 (305)
. .+.+.....+...+++++.|.||++....... ... .+ ........+.+++|+|++++.++.... ..|+.
T Consensus 164 a~~~~~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~ 243 (252)
T PRK12747 164 AINTMTFTLAKQLGARGITVNAILPGFIKTDMNAELLSDPMMKQYATTISAFNRLGEVEDIADTAAFLASPDSRWVTGQL 243 (252)
T ss_pred HHHHHHHHHHHHHhHcCCEEEEEecCCccCchhhhcccCHHHHHHHHhcCcccCCCCHHHHHHHHHHHcCccccCcCCcE
Confidence 1 11111222244579999999999964332110 000 00 001112346789999999999986433 35788
Q ss_pred EEEecCC
Q 021928 280 FEVVNGE 286 (305)
Q Consensus 280 ~~v~~g~ 286 (305)
+.+.+|.
T Consensus 244 i~vdgg~ 250 (252)
T PRK12747 244 IDVSGGS 250 (252)
T ss_pred EEecCCc
Confidence 8887653
|
|
| >PRK07677 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.50 E-value=1.3e-12 Score=116.70 Aligned_cols=189 Identities=16% Similarity=0.157 Sum_probs=121.2
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh------cCCCcEEeecCCCCHHHHHHHhc-------Ccc
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GVR 164 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~~~v~~v~~D~~d~~~~~~~~~-------~~d 164 (305)
+|+++||||+|+||++++++|+++|++|++++|+.....+. .+.++.++.+|++|.+++.++++ .+|
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 80 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRID 80 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCcc
Confidence 37999999999999999999999999999999987543221 23468899999999888876554 579
Q ss_pred EEEECCcch--------------------------Hhhhh----hhc-CCCEEEEEcccccccCCCCcccccchHHH--H
Q 021928 165 SIICPSEGF--------------------------ISNAG----SLK-GVQHVILLSQLSVYRGSGGIQALMKGNAR--K 211 (305)
Q Consensus 165 ~Vi~~~~g~--------------------------~~~~a----~~~-gv~~~V~iSS~~~~~~~~~~~~~~~~~~~--~ 211 (305)
.+|++++.. +..++ .+. .-.+||++||...+.+......|..+++. .
T Consensus 81 ~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sKaa~~~ 160 (252)
T PRK07677 81 ALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWDAGPGVIHSAAAKAGVLA 160 (252)
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhccCCCCCcchHHHHHHHHH
Confidence 999884310 11111 122 23689999998776554444445443321 1
Q ss_pred HHHHHHHHHH-hCCCCEEEEecCCcccCCCCCc-----ce--eeecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEEE
Q 021928 212 LAEQDESMLM-ASGIPYTIIRTGVLQNTPGGKQ-----GF--QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFE 281 (305)
Q Consensus 212 ~~~~aE~~l~-~~gi~~tilRPg~l~~~~~~~~-----~~--~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~ 281 (305)
+.+.....+. ..|++++.|+||.+........ .. .+........+...+|+|+++..++.... ..|+.+.
T Consensus 161 ~~~~la~e~~~~~gi~v~~v~PG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~ 240 (252)
T PRK07677 161 MTRTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWESEEAAKRTIQSVPLGRLGTPEEIAGLAYFLLSDEAAYINGTCIT 240 (252)
T ss_pred HHHHHHHHhCcccCeEEEEEeecccccccccccccCCHHHHHHHhccCCCCCCCCHHHHHHHHHHHcCccccccCCCEEE
Confidence 1121112222 3589999999999753211000 00 00011112346788999999999886542 4678888
Q ss_pred EecCC
Q 021928 282 VVNGE 286 (305)
Q Consensus 282 v~~g~ 286 (305)
+.+|.
T Consensus 241 ~~gg~ 245 (252)
T PRK07677 241 MDGGQ 245 (252)
T ss_pred ECCCe
Confidence 87664
|
|
| >PRK07831 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.50 E-value=8.9e-13 Score=118.41 Aligned_cols=188 Identities=14% Similarity=0.103 Sum_probs=120.5
Q ss_pred CCCEEEEEcCCC-hHHHHHHHHHHhCCCeEEEEEcCcchhhhh-------cC-CCcEEeecCCCCHHHHHHHhc------
Q 021928 97 ARDAVLVTDGDS-DIGQMVILSLIVKRTRIKALVKDKRNAMES-------FG-TYVESMAGDASNKKFLKTALR------ 161 (305)
Q Consensus 97 ~~~~vlVtGatG-~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~-------~~-~~v~~v~~D~~d~~~~~~~~~------ 161 (305)
.+++++||||+| +||++++++|+++|++|+++.|+.++..+. .+ .++.++.+|+++.+++.++++
T Consensus 16 ~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 95 (262)
T PRK07831 16 AGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVERL 95 (262)
T ss_pred CCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 358999999997 799999999999999999999887553221 22 357889999999888876664
Q ss_pred -CccEEEECCcch--------------------------H----hhhhhhcC-CCEEEEEcccccccCCCCcccccchHH
Q 021928 162 -GVRSIICPSEGF--------------------------I----SNAGSLKG-VQHVILLSQLSVYRGSGGIQALMKGNA 209 (305)
Q Consensus 162 -~~d~Vi~~~~g~--------------------------~----~~~a~~~g-v~~~V~iSS~~~~~~~~~~~~~~~~~~ 209 (305)
.+|++|++++.. + .......+ -.+||++||.....+..+...|...++
T Consensus 96 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~~sKa 175 (262)
T PRK07831 96 GRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGWRAQHGQAHYAAAKA 175 (262)
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCCCCcchHHHHH
Confidence 569999884310 0 11122232 468999988776655544445544332
Q ss_pred --HHHHHHHHHHHHhCCCCEEEEecCCcccCCCCC---cce--eeecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEE
Q 021928 210 --RKLAEQDESMLMASGIPYTIIRTGVLQNTPGGK---QGF--QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIF 280 (305)
Q Consensus 210 --~~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~---~~~--~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~ 280 (305)
..+.+.....+...+++++.|+||.+....... ... .+........+..++|+|++++.++.... ..|+++
T Consensus 176 al~~~~~~la~e~~~~gI~v~~i~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~r~~~p~~va~~~~~l~s~~~~~itG~~i 255 (262)
T PRK07831 176 GVMALTRCSALEAAEYGVRINAVAPSIAMHPFLAKVTSAELLDELAAREAFGRAAEPWEVANVIAFLASDYSSYLTGEVV 255 (262)
T ss_pred HHHHHHHHHHHHhCccCeEEEEEeeCCccCcccccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCcCCceE
Confidence 111111112234478999999999864332110 000 01111122346688999999999987543 357777
Q ss_pred EEec
Q 021928 281 EVVN 284 (305)
Q Consensus 281 ~v~~ 284 (305)
.+.+
T Consensus 256 ~v~~ 259 (262)
T PRK07831 256 SVSS 259 (262)
T ss_pred EeCC
Confidence 7765
|
|
| >PRK06198 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.50 E-value=1.6e-12 Score=116.30 Aligned_cols=190 Identities=11% Similarity=0.125 Sum_probs=122.5
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCe-EEEEEcCcchhhh------hcCCCcEEeecCCCCHHHHHHHhc-------C
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTR-IKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTALR-------G 162 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~-V~~~~R~~~~~~~------~~~~~v~~v~~D~~d~~~~~~~~~-------~ 162 (305)
+.++|+||||+|+||++++++|+++|++ |+++.|++++... ..+..+.++.+|+++.+++.++++ +
T Consensus 5 ~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 84 (260)
T PRK06198 5 DGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAFGR 84 (260)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 3589999999999999999999999998 9999998654321 123457789999999888877664 5
Q ss_pred ccEEEECCcch--------------------------Hhhhh----hhc-CCCEEEEEcccccccCCCCcccccchHHH-
Q 021928 163 VRSIICPSEGF--------------------------ISNAG----SLK-GVQHVILLSQLSVYRGSGGIQALMKGNAR- 210 (305)
Q Consensus 163 ~d~Vi~~~~g~--------------------------~~~~a----~~~-gv~~~V~iSS~~~~~~~~~~~~~~~~~~~- 210 (305)
+|.+|++++.. +.+++ .+. ...+||++||..++.+......|...+..
T Consensus 85 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~~sK~a~ 164 (260)
T PRK06198 85 LDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGGQPFLAAYCASKGAL 164 (260)
T ss_pred CCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCcccccCCCCcchhHHHHHHH
Confidence 79999884310 01111 122 23689999998877655444455443221
Q ss_pred -HHHHHHHHHHHhCCCCEEEEecCCcccCCCC---Cc-----ceee---ecCCCCCCccCHHHHHHHHHHHhhCCC--CC
Q 021928 211 -KLAEQDESMLMASGIPYTIIRTGVLQNTPGG---KQ-----GFQF---EEGCAANGSLSKEDAAFICVEALESIP--QT 276 (305)
Q Consensus 211 -~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~---~~-----~~~~---~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~ 276 (305)
.+.+.....+...++.++.++||++...... .. .... ........+++.+|+|++++.++.+.. ..
T Consensus 165 ~~~~~~~a~e~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~ 244 (260)
T PRK06198 165 ATLTRNAAYALLRNRIRVNGLNIGWMATEGEDRIQREFHGAPDDWLEKAAATQPFGRLLDPDEVARAVAFLLSDESGLMT 244 (260)
T ss_pred HHHHHHHHHHhcccCeEEEEEeeccccCcchhhhhhhccCCChHHHHHHhccCCccCCcCHHHHHHHHHHHcChhhCCcc
Confidence 1111111223346799999999996433210 00 0000 011122346799999999999987554 46
Q ss_pred CcEEEEecCC
Q 021928 277 GLIFEVVNGE 286 (305)
Q Consensus 277 ~~~~~v~~g~ 286 (305)
++.+.+.++.
T Consensus 245 G~~~~~~~~~ 254 (260)
T PRK06198 245 GSVIDFDQSV 254 (260)
T ss_pred CceEeECCcc
Confidence 8888888764
|
|
| >TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.50 E-value=8.7e-13 Score=133.98 Aligned_cols=190 Identities=17% Similarity=0.184 Sum_probs=123.5
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh-------cC-CCcEEeecCCCCHHHHHHHhc-------
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------FG-TYVESMAGDASNKKFLKTALR------- 161 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~-------~~-~~v~~v~~D~~d~~~~~~~~~------- 161 (305)
.+++||||||+|+||++++++|+++|++|++++|+.+..... .+ ..+..+.+|++|.+++.++++
T Consensus 413 ~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~~g 492 (676)
T TIGR02632 413 ARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALAYG 492 (676)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence 458999999999999999999999999999999987653221 12 246789999999998887775
Q ss_pred CccEEEECCcc----h----------------------H----hhhhhhcC-CCEEEEEcccccccCCCCcccccchHHH
Q 021928 162 GVRSIICPSEG----F----------------------I----SNAGSLKG-VQHVILLSQLSVYRGSGGIQALMKGNAR 210 (305)
Q Consensus 162 ~~d~Vi~~~~g----~----------------------~----~~~a~~~g-v~~~V~iSS~~~~~~~~~~~~~~~~~~~ 210 (305)
++|+|||+++. . + ...+++.+ -.+||++||..+..+......|..++..
T Consensus 493 ~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~~~~~~~~aY~aSKaA 572 (676)
T TIGR02632 493 GVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVYAGKNASAYSAAKAA 572 (676)
T ss_pred CCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhcCCCCCCHHHHHHHHH
Confidence 68999988431 0 0 01122233 3589999998776555555555443321
Q ss_pred H--HHHHHHHHHHhCCCCEEEEecCCcccCCC--CCc---------ce-------eeecCCCCCCccCHHHHHHHHHHHh
Q 021928 211 K--LAEQDESMLMASGIPYTIIRTGVLQNTPG--GKQ---------GF-------QFEEGCAANGSLSKEDAAFICVEAL 270 (305)
Q Consensus 211 ~--~~~~aE~~l~~~gi~~tilRPg~l~~~~~--~~~---------~~-------~~~~~~~~~~~Is~~DvA~~iv~~l 270 (305)
. +.+.....+...+++++.|+||.+....+ ... +. .+........+++.+|||++++.++
T Consensus 573 ~~~l~r~lA~el~~~gIrVn~V~Pg~V~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~r~v~peDVA~av~~L~ 652 (676)
T TIGR02632 573 EAHLARCLAAEGGTYGIRVNTVNPDAVLQGSGIWDGEWREERAAAYGIPADELEEHYAKRTLLKRHIFPADIAEAVFFLA 652 (676)
T ss_pred HHHHHHHHHHHhcccCeEEEEEECCceecCcccccccchhhhhhcccCChHHHHHHHHhcCCcCCCcCHHHHHHHHHHHh
Confidence 1 11111122334689999999998542111 000 00 0111122245688999999999998
Q ss_pred hCCC--CCCcEEEEecCC
Q 021928 271 ESIP--QTGLIFEVVNGE 286 (305)
Q Consensus 271 ~~~~--~~~~~~~v~~g~ 286 (305)
.... ..|+++++.+|.
T Consensus 653 s~~~~~~TG~~i~vDGG~ 670 (676)
T TIGR02632 653 SSKSEKTTGCIITVDGGV 670 (676)
T ss_pred CCcccCCcCcEEEECCCc
Confidence 6433 458899988775
|
|
| >KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.50 E-value=2.3e-12 Score=116.34 Aligned_cols=188 Identities=18% Similarity=0.167 Sum_probs=119.1
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhh-------hhcCCC-cEEeecCCCCHHHHHHHh-------
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM-------ESFGTY-VESMAGDASNKKFLKTAL------- 160 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~-------~~~~~~-v~~v~~D~~d~~~~~~~~------- 160 (305)
..+|.|+|||||.+||.+++.+|+++|.+++.+.|..+... +..+.. +.++++|++|.+++.+++
T Consensus 10 ~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~f 89 (282)
T KOG1205|consen 10 LAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIRHF 89 (282)
T ss_pred hCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHHhc
Confidence 34699999999999999999999999999888888765522 223344 999999999998888554
Q ss_pred cCccEEEECCc----ch--------------------------HhhhhhhcCCCEEEEEcccccccCCCCcccccchHH-
Q 021928 161 RGVRSIICPSE----GF--------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA- 209 (305)
Q Consensus 161 ~~~d~Vi~~~~----g~--------------------------~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~- 209 (305)
.++|++|++++ ++ ....+++.+-.|||.+||...+.+.+....|.+++.
T Consensus 90 g~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~~P~~~~Y~ASK~A 169 (282)
T KOG1205|consen 90 GRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMPLPFRSIYSASKHA 169 (282)
T ss_pred CCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccCCCcccccchHHHH
Confidence 57899998744 10 111234455679999999999887666666665442
Q ss_pred -HHHHHHHHHHHHhCCCCEE-EEecCCcccCCCCCcceeeecC-CCCCCccCHHHHHH--HHHHHhhCCCCCCc-EEEEe
Q 021928 210 -RKLAEQDESMLMASGIPYT-IIRTGVLQNTPGGKQGFQFEEG-CAANGSLSKEDAAF--ICVEALESIPQTGL-IFEVV 283 (305)
Q Consensus 210 -~~~~~~aE~~l~~~gi~~t-ilRPg~l~~~~~~~~~~~~~~~-~~~~~~Is~~DvA~--~iv~~l~~~~~~~~-~~~v~ 283 (305)
..+.+-....+...+..+. .+.||++..+....... -..+ .........+|++. .++.++..+..... .+-+.
T Consensus 170 l~~f~etLR~El~~~~~~i~i~V~PG~V~Te~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 248 (282)
T KOG1205|consen 170 LEGFFETLRQELIPLGTIIIILVSPGPIETEFTGKELL-GEEGKSQQGPFLRTEDVADPEAVAYAISTPPCRQVEDIIIA 248 (282)
T ss_pred HHHHHHHHHHHhhccCceEEEEEecCceeecccchhhc-cccccccccchhhhhhhhhHHHHHHHHhcCcccchhheeec
Confidence 1112222222333443332 68999976553322111 0011 12233444566755 78888877765432 44444
Q ss_pred c
Q 021928 284 N 284 (305)
Q Consensus 284 ~ 284 (305)
.
T Consensus 249 p 249 (282)
T KOG1205|consen 249 P 249 (282)
T ss_pred c
Confidence 3
|
|
| >COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.49 E-value=4.3e-13 Score=123.92 Aligned_cols=142 Identities=20% Similarity=0.252 Sum_probs=102.8
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcch------h----------hhhcCCCcEEeecCCC------CHHH
Q 021928 99 DAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRN------A----------MESFGTYVESMAGDAS------NKKF 155 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~------~----------~~~~~~~v~~v~~D~~------d~~~ 155 (305)
++|++||||||+|.++++.|+.+-. +|++++|..+. . .+....+++++.+|+. +...
T Consensus 1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~~ 80 (382)
T COG3320 1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERT 80 (382)
T ss_pred CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHHH
Confidence 5899999999999999999998765 99999997652 1 1133468999999998 3577
Q ss_pred HHHHhcCccEEEECCc-------------------chHhhhhhhcCCCEEEEEcccccccCCCC------cc--------
Q 021928 156 LKTALRGVRSIICPSE-------------------GFISNAGSLKGVQHVILLSQLSVYRGSGG------IQ-------- 202 (305)
Q Consensus 156 ~~~~~~~~d~Vi~~~~-------------------g~~~~~a~~~gv~~~V~iSS~~~~~~~~~------~~-------- 202 (305)
+..+.+.+|.|||+++ ..+..+|...+.|.+.|+||.++...... ..
T Consensus 81 ~~~La~~vD~I~H~gA~Vn~v~pYs~L~~~NVlGT~evlrLa~~gk~Kp~~yVSsisv~~~~~~~~~~~~~~~~~~~~~~ 160 (382)
T COG3320 81 WQELAENVDLIIHNAALVNHVFPYSELRGANVLGTAEVLRLAATGKPKPLHYVSSISVGETEYYSNFTVDFDEISPTRNV 160 (382)
T ss_pred HHHHhhhcceEEecchhhcccCcHHHhcCcchHhHHHHHHHHhcCCCceeEEEeeeeeccccccCCCccccccccccccc
Confidence 8888889999999843 12556677788899999999988652110 00
Q ss_pred -cccchHHHHHHHHHHHHHHh---CCCCEEEEecCCcccCCC
Q 021928 203 -ALMKGNARKLAEQDESMLMA---SGIPYTIIRTGVLQNTPG 240 (305)
Q Consensus 203 -~~~~~~~~~~~~~aE~~l~~---~gi~~tilRPg~l~~~~~ 240 (305)
......+..-|..+|..+++ .|++++|+|||.+..+..
T Consensus 161 ~~~~~~GY~~SKwvaE~Lvr~A~~rGLpv~I~Rpg~I~gds~ 202 (382)
T COG3320 161 GQGLAGGYGRSKWVAEKLVREAGDRGLPVTIFRPGYITGDSR 202 (382)
T ss_pred cCccCCCcchhHHHHHHHHHHHhhcCCCeEEEecCeeeccCc
Confidence 00001122235567877764 689999999999775544
|
|
| >PRK05872 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.49 E-value=1.7e-12 Score=119.11 Aligned_cols=177 Identities=15% Similarity=0.137 Sum_probs=115.5
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh---hcC--CCcEEeecCCCCHHHHHHHhc-------Cc
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFG--TYVESMAGDASNKKFLKTALR-------GV 163 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~---~~~--~~v~~v~~D~~d~~~~~~~~~-------~~ 163 (305)
..+++|+||||+|+||++++++|+++|++|+++.|++++..+ ..+ ..+..+.+|++|.+++.++++ .+
T Consensus 7 l~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 86 (296)
T PRK05872 7 LAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVERFGGI 86 (296)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 346899999999999999999999999999999998765432 122 245566799999888776653 57
Q ss_pred cEEEECCcch--------------------------Hhhh----hhhcCCCEEEEEcccccccCCCCcccccchHHH--H
Q 021928 164 RSIICPSEGF--------------------------ISNA----GSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--K 211 (305)
Q Consensus 164 d~Vi~~~~g~--------------------------~~~~----a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~--~ 211 (305)
|+||++++.. +... ..+ ...+||++||...+.+......|..++.. .
T Consensus 87 d~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~-~~g~iv~isS~~~~~~~~~~~~Y~asKaal~~ 165 (296)
T PRK05872 87 DVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIE-RRGYVLQVSSLAAFAAAPGMAAYCASKAGVEA 165 (296)
T ss_pred CEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH-cCCEEEEEeCHhhcCCCCCchHHHHHHHHHHH
Confidence 9999884310 0111 112 23689999999887665555555443321 1
Q ss_pred HHHHHHHHHHhCCCCEEEEecCCcccCCCCC-cce--e---e-e-cCCCCCCccCHHHHHHHHHHHhhCC
Q 021928 212 LAEQDESMLMASGIPYTIIRTGVLQNTPGGK-QGF--Q---F-E-EGCAANGSLSKEDAAFICVEALESI 273 (305)
Q Consensus 212 ~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~-~~~--~---~-~-~~~~~~~~Is~~DvA~~iv~~l~~~ 273 (305)
+.+.....+...++.++.+.||++....... ... . + . ........++.+|+|++++.++.+.
T Consensus 166 ~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~~i~~~~~~~ 235 (296)
T PRK05872 166 FANALRLEVAHHGVTVGSAYLSWIDTDLVRDADADLPAFRELRARLPWPLRRTTSVEKCAAAFVDGIERR 235 (296)
T ss_pred HHHHHHHHHHHHCcEEEEEecCcccchhhhhccccchhHHHHHhhCCCcccCCCCHHHHHHHHHHHHhcC
Confidence 1122223345579999999999964322111 000 0 0 0 0112235678999999999999754
|
|
| >TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.49 E-value=1.2e-12 Score=117.62 Aligned_cols=188 Identities=17% Similarity=0.135 Sum_probs=118.2
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh---cCCCcEEeecCCCCHHHHHHHhc-------CccEE
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALR-------GVRSI 166 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~~~~v~~v~~D~~d~~~~~~~~~-------~~d~V 166 (305)
.+++++||||+|+||++++++|+++|++|+++.|+.+...+. .+..+.++.+|+.|.+++.++++ .+|++
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l 83 (262)
T TIGR03325 4 KGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAHGDAVVGVEGDVRSLDDHKEAVARCVAAFGKIDCL 83 (262)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCceEEEEeccCCHHHHHHHHHHHHHHhCCCCEE
Confidence 458999999999999999999999999999999987654332 23457889999999887766654 56999
Q ss_pred EECCcc-----h--------------------------Hhhh----hhhcCCCEEEEEcccccccCCCCcccccchHHHH
Q 021928 167 ICPSEG-----F--------------------------ISNA----GSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK 211 (305)
Q Consensus 167 i~~~~g-----~--------------------------~~~~----a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~~ 211 (305)
|++++. . +..+ ..+.+ .++|++||...+.+......|..++..-
T Consensus 84 i~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-g~iv~~sS~~~~~~~~~~~~Y~~sKaa~ 162 (262)
T TIGR03325 84 IPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVASR-GSVIFTISNAGFYPNGGGPLYTAAKHAV 162 (262)
T ss_pred EECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhcC-CCEEEEeccceecCCCCCchhHHHHHHH
Confidence 988431 0 0001 11222 5788888877665544444454433211
Q ss_pred --HHHHHHHHHHhCCCCEEEEecCCcccCCCCC------cc----eee----ecCCCCCCccCHHHHHHHHHHHhhCCC-
Q 021928 212 --LAEQDESMLMASGIPYTIIRTGVLQNTPGGK------QG----FQF----EEGCAANGSLSKEDAAFICVEALESIP- 274 (305)
Q Consensus 212 --~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~------~~----~~~----~~~~~~~~~Is~~DvA~~iv~~l~~~~- 274 (305)
+.+.....+.. .+.+..|.||++....... .. ... ..........+++|+|.+++.++.++.
T Consensus 163 ~~l~~~la~e~~~-~irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~eva~~~~~l~s~~~~ 241 (262)
T TIGR03325 163 VGLVKELAFELAP-YVRVNGVAPGGMSSDLRGPKSLGMADKSISTVPLGDMLKSVLPIGRMPDAEEYTGAYVFFATRGDT 241 (262)
T ss_pred HHHHHHHHHhhcc-CeEEEEEecCCCcCCCccccccccccccccccchhhhhhhcCCCCCCCChHHhhhheeeeecCCCc
Confidence 11111111222 3899999999964322110 00 000 000112335678999999999987532
Q ss_pred --CCCcEEEEecCC
Q 021928 275 --QTGLIFEVVNGE 286 (305)
Q Consensus 275 --~~~~~~~v~~g~ 286 (305)
..++++.+.+|.
T Consensus 242 ~~~tG~~i~vdgg~ 255 (262)
T TIGR03325 242 VPATGAVLNYDGGM 255 (262)
T ss_pred ccccceEEEecCCe
Confidence 367888887663
|
Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase. |
| >PRK05855 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.48 E-value=1.6e-12 Score=128.94 Aligned_cols=178 Identities=19% Similarity=0.166 Sum_probs=117.9
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh------cCCCcEEeecCCCCHHHHHHHhc-------Cc
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GV 163 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~~~v~~v~~D~~d~~~~~~~~~-------~~ 163 (305)
..++++||||+|+||++++++|+++|++|++++|+.++..+. .+.++.++.+|++|.+++.++++ .+
T Consensus 314 ~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i 393 (582)
T PRK05855 314 SGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEHGVP 393 (582)
T ss_pred CCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence 458999999999999999999999999999999987653321 23467899999999988877665 37
Q ss_pred cEEEECCcc----h----------------------Hh----hhhhhcC-CCEEEEEcccccccCCCCcccccchHHH--
Q 021928 164 RSIICPSEG----F----------------------IS----NAGSLKG-VQHVILLSQLSVYRGSGGIQALMKGNAR-- 210 (305)
Q Consensus 164 d~Vi~~~~g----~----------------------~~----~~a~~~g-v~~~V~iSS~~~~~~~~~~~~~~~~~~~-- 210 (305)
|++|++++. . +. ....+.+ -.+||++||..++.+..+...|..+++.
T Consensus 394 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sKaa~~ 473 (582)
T PRK05855 394 DIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYAPSRSLPAYATSKAAVL 473 (582)
T ss_pred cEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCCCCCcHHHHHHHHHH
Confidence 999988431 0 00 1122233 3589999999888776666666544321
Q ss_pred HHHHHHHHHHHhCCCCEEEEecCCcccCCCCCcce---eee---------cCCCCCCccCHHHHHHHHHHHhhCCC
Q 021928 211 KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGF---QFE---------EGCAANGSLSKEDAAFICVEALESIP 274 (305)
Q Consensus 211 ~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~~~~---~~~---------~~~~~~~~Is~~DvA~~iv~~l~~~~ 274 (305)
.+.+.....+...++.++.|+||.+.......... ... ........++.+|+|+.+++++..+.
T Consensus 474 ~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~va~~~~~~~~~~~ 549 (582)
T PRK05855 474 MLSECLRAELAAAGIGVTAICPGFVDTNIVATTRFAGADAEDEARRRGRADKLYQRRGYGPEKVAKAIVDAVKRNK 549 (582)
T ss_pred HHHHHHHHHhcccCcEEEEEEeCCCcccchhccccCCcccchhhhHHhhhhhhccccCCCHHHHHHHHHHHHHcCC
Confidence 11122222344579999999999965322111000 000 00001223588999999999998654
|
|
| >PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.48 E-value=2e-12 Score=116.00 Aligned_cols=189 Identities=15% Similarity=0.012 Sum_probs=119.5
Q ss_pred CCCEEEEEcCCC--hHHHHHHHHHHhCCCeEEEEEcCc-----------chh---h---hhcCCCcEEeecCCCCHHHHH
Q 021928 97 ARDAVLVTDGDS--DIGQMVILSLIVKRTRIKALVKDK-----------RNA---M---ESFGTYVESMAGDASNKKFLK 157 (305)
Q Consensus 97 ~~~~vlVtGatG--~iG~~l~~~L~~~g~~V~~~~R~~-----------~~~---~---~~~~~~v~~v~~D~~d~~~~~ 157 (305)
.+++|+||||+| +||++++++|+++|++|++..|.. .+. . ...+.++.++.+|++|.+++.
T Consensus 5 ~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~i~ 84 (256)
T PRK12859 5 KNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQNDAPK 84 (256)
T ss_pred CCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHH
Confidence 458999999995 899999999999999998875321 110 1 112346788999999998887
Q ss_pred HHhc-------CccEEEECCcch------------------------------HhhhhhhcCCCEEEEEcccccccCCCC
Q 021928 158 TALR-------GVRSIICPSEGF------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGG 200 (305)
Q Consensus 158 ~~~~-------~~d~Vi~~~~g~------------------------------~~~~a~~~gv~~~V~iSS~~~~~~~~~ 200 (305)
+++. .+|++|++++.. +...+++.+-.+||++||.....+..+
T Consensus 85 ~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~ 164 (256)
T PRK12859 85 ELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKSGGRIINMTSGQFQGPMVG 164 (256)
T ss_pred HHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEEcccccCCCCCC
Confidence 7664 369999874310 111223344569999999887655444
Q ss_pred cccccchHH--HHHHHHHHHHHHhCCCCEEEEecCCcccCCCCCcc-eeeecCCCCCCccCHHHHHHHHHHHhhCCC--C
Q 021928 201 IQALMKGNA--RKLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQG-FQFEEGCAANGSLSKEDAAFICVEALESIP--Q 275 (305)
Q Consensus 201 ~~~~~~~~~--~~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~~~-~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~ 275 (305)
...|..++. ..+.+.....+...++.++.|+||++......... ..+...........++|+|+++..++.... .
T Consensus 165 ~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~ 244 (256)
T PRK12859 165 ELAYAATKGAIDALTSSLAAEVAHLGITVNAINPGPTDTGWMTEEIKQGLLPMFPFGRIGEPKDAARLIKFLASEEAEWI 244 (256)
T ss_pred chHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEEccccCCCCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCc
Confidence 445544332 12222233334567899999999997543211110 000011111234678999999999886543 3
Q ss_pred CCcEEEEecC
Q 021928 276 TGLIFEVVNG 285 (305)
Q Consensus 276 ~~~~~~v~~g 285 (305)
.|+.+.+.+|
T Consensus 245 ~G~~i~~dgg 254 (256)
T PRK12859 245 TGQIIHSEGG 254 (256)
T ss_pred cCcEEEeCCC
Confidence 5777777765
|
|
| >PRK12744 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.48 E-value=3.7e-12 Score=114.04 Aligned_cols=189 Identities=14% Similarity=0.118 Sum_probs=113.3
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcch----hh------hhcCCCcEEeecCCCCHHHHHHHhc-----
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN----AM------ESFGTYVESMAGDASNKKFLKTALR----- 161 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~----~~------~~~~~~v~~v~~D~~d~~~~~~~~~----- 161 (305)
.+++++||||+|+||++++++|+++|++|+++.++... .. ...+.++.++++|++|.+++.++++
T Consensus 7 ~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 86 (257)
T PRK12744 7 KGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDAKAA 86 (257)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHHHHh
Confidence 35899999999999999999999999997777654321 11 1123468889999999988887664
Q ss_pred --CccEEEECCcc----h----------------------Hhhhh-hh-cCCCEEEEE-cccccccCCCCcccccchHHH
Q 021928 162 --GVRSIICPSEG----F----------------------ISNAG-SL-KGVQHVILL-SQLSVYRGSGGIQALMKGNAR 210 (305)
Q Consensus 162 --~~d~Vi~~~~g----~----------------------~~~~a-~~-~gv~~~V~i-SS~~~~~~~~~~~~~~~~~~~ 210 (305)
.+|++||+++. . +...+ .. ....+++++ ||... ........|..+++.
T Consensus 87 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~iv~~~ss~~~-~~~~~~~~Y~~sK~a 165 (257)
T PRK12744 87 FGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDNGKIVTLVTSLLG-AFTPFYSAYAGSKAP 165 (257)
T ss_pred hCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCEEEEecchhc-ccCCCcccchhhHHH
Confidence 57999988431 0 01111 11 112456665 44322 222233344443321
Q ss_pred --HHHHHHHHHHHhCCCCEEEEecCCcccCCC----CCcceee----ec--CCCCCCccCHHHHHHHHHHHhhCCC-CCC
Q 021928 211 --KLAEQDESMLMASGIPYTIIRTGVLQNTPG----GKQGFQF----EE--GCAANGSLSKEDAAFICVEALESIP-QTG 277 (305)
Q Consensus 211 --~~~~~aE~~l~~~gi~~tilRPg~l~~~~~----~~~~~~~----~~--~~~~~~~Is~~DvA~~iv~~l~~~~-~~~ 277 (305)
.+.+.....+...+++++.++||.+..... ......+ .. ........+++|+|.++..++.... ..+
T Consensus 166 ~~~~~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~g 245 (257)
T PRK12744 166 VEHFTRAASKEFGARGISVTAVGPGPMDTPFFYPQEGAEAVAYHKTAAALSPFSKTGLTDIEDIVPFIRFLVTDGWWITG 245 (257)
T ss_pred HHHHHHHHHHHhCcCceEEEEEecCccccchhccccccchhhcccccccccccccCCCCCHHHHHHHHHHhhcccceeec
Confidence 111222222334689999999999753211 0010000 00 1111257789999999999998532 257
Q ss_pred cEEEEecCC
Q 021928 278 LIFEVVNGE 286 (305)
Q Consensus 278 ~~~~v~~g~ 286 (305)
+++.+.+|.
T Consensus 246 ~~~~~~gg~ 254 (257)
T PRK12744 246 QTILINGGY 254 (257)
T ss_pred ceEeecCCc
Confidence 888888764
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.47 E-value=1.6e-12 Score=128.06 Aligned_cols=191 Identities=14% Similarity=0.117 Sum_probs=126.5
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh---hcCCCcEEeecCCCCHHHHHHHhc-------CccEE
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALR-------GVRSI 166 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~---~~~~~v~~v~~D~~d~~~~~~~~~-------~~d~V 166 (305)
.+++++||||+|+||++++++|+++|++|+++.|++++..+ ..+..+..+.+|++|.+++.++++ .+|++
T Consensus 268 ~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l 347 (520)
T PRK06484 268 SPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALGDEHLSVQADITDEAAVESAFAQIQARWGRLDVL 347 (520)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 56899999999999999999999999999999998765332 234467789999999988877664 47999
Q ss_pred EECCcc-----h----------------------Hhhhh-hh-cCCCEEEEEcccccccCCCCcccccchHHH--HHHHH
Q 021928 167 ICPSEG-----F----------------------ISNAG-SL-KGVQHVILLSQLSVYRGSGGIQALMKGNAR--KLAEQ 215 (305)
Q Consensus 167 i~~~~g-----~----------------------~~~~a-~~-~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~--~~~~~ 215 (305)
||+++. . +...+ .. .+-.+||++||.....+..+...|...++. .+.+.
T Consensus 348 i~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaal~~l~~~ 427 (520)
T PRK06484 348 VNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIASLLALPPRNAYCASKAAVTMLSRS 427 (520)
T ss_pred EECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhhcCCCCCCchhHHHHHHHHHHHHH
Confidence 987431 0 00111 11 233689999999887665555555543321 11222
Q ss_pred HHHHHHhCCCCEEEEecCCcccCCCCC----ccee---eecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEEEEecCC
Q 021928 216 DESMLMASGIPYTIIRTGVLQNTPGGK----QGFQ---FEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVNGE 286 (305)
Q Consensus 216 aE~~l~~~gi~~tilRPg~l~~~~~~~----~~~~---~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~v~~g~ 286 (305)
....+...+++++.|.||++....... .... +..........+++|+|++++.++.... ..|+.+.+.+|.
T Consensus 428 la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~s~~~~~~~G~~i~vdgg~ 507 (520)
T PRK06484 428 LACEWAPAGIRVNTVAPGYIETPAVLALKASGRADFDSIRRRIPLGRLGDPEEVAEAIAFLASPAASYVNGATLTVDGGW 507 (520)
T ss_pred HHHHhhhhCeEEEEEEeCCccCchhhhhccccHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccCcEEEECCCc
Confidence 223344578999999999964332110 0000 0011112345689999999999997543 468889888775
Q ss_pred c
Q 021928 287 E 287 (305)
Q Consensus 287 ~ 287 (305)
.
T Consensus 508 ~ 508 (520)
T PRK06484 508 T 508 (520)
T ss_pred c
Confidence 3
|
|
| >TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative | Back alignment and domain information |
|---|
Probab=99.47 E-value=2.2e-12 Score=114.02 Aligned_cols=185 Identities=16% Similarity=0.123 Sum_probs=116.7
Q ss_pred EEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcch-hhh------hcCCCcEEeecCCCCHHHHHHHhc-------CccEE
Q 021928 101 VLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-AME------SFGTYVESMAGDASNKKFLKTALR-------GVRSI 166 (305)
Q Consensus 101 vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~-~~~------~~~~~v~~v~~D~~d~~~~~~~~~-------~~d~V 166 (305)
|+||||+|+||.+++++|+++|++|++++|..+. ... ..+.++.++.+|++|.+++.++++ .+|.+
T Consensus 1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~~l 80 (239)
T TIGR01831 1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEHGAYYGV 80 (239)
T ss_pred CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 6899999999999999999999999998876432 111 123468899999999988876654 45888
Q ss_pred EECCcc-----h---------------------Hhhhh-----hhcCCCEEEEEcccccccCCCCcccccchHHH--HHH
Q 021928 167 ICPSEG-----F---------------------ISNAG-----SLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--KLA 213 (305)
Q Consensus 167 i~~~~g-----~---------------------~~~~a-----~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~--~~~ 213 (305)
|++++. . +..++ ++.+.++||++||.....+......|...+.. .+.
T Consensus 81 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~~~ 160 (239)
T TIGR01831 81 VLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLASVSGVMGNRGQVNYSAAKAGLIGAT 160 (239)
T ss_pred EECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeEEEEEcchhhccCCCCCcchHHHHHHHHHHH
Confidence 887321 0 11111 22445789999998766555454455443321 111
Q ss_pred HHHHHHHHhCCCCEEEEecCCcccCCCCC-cce--eeecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEEEEecC
Q 021928 214 EQDESMLMASGIPYTIIRTGVLQNTPGGK-QGF--QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVNG 285 (305)
Q Consensus 214 ~~aE~~l~~~gi~~tilRPg~l~~~~~~~-~~~--~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~v~~g 285 (305)
+.....+...++.++.++||++....... ... ..............+|+|++++.++..+. ..+....+.+|
T Consensus 161 ~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~~gg 237 (239)
T TIGR01831 161 KALAVELAKRKITVNCIAPGLIDTEMLAEVEHDLDEALKTVPMNRMGQPAEVASLAGFLMSDGASYVTRQVISVNGG 237 (239)
T ss_pred HHHHHHHhHhCeEEEEEEEccCccccchhhhHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCchhcCccCCEEEecCC
Confidence 22223344578999999999965332211 100 00001111235688999999999997543 34666666654
|
This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found. |
| >PRK07791 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.46 E-value=4.3e-12 Score=115.92 Aligned_cols=191 Identities=16% Similarity=0.105 Sum_probs=120.1
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCc---------chhhh------hcCCCcEEeecCCCCHHHHHHHh-
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK---------RNAME------SFGTYVESMAGDASNKKFLKTAL- 160 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~---------~~~~~------~~~~~v~~v~~D~~d~~~~~~~~- 160 (305)
.+++++||||+++||++++++|++.|++|+++.|+. +...+ ..+.++.++.+|++|.+++.+++
T Consensus 5 ~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~ 84 (286)
T PRK07791 5 DGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANLVD 84 (286)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHHHH
Confidence 358999999999999999999999999999988764 22111 12345778999999988876655
Q ss_pred ------cCccEEEECCcc----h----------------------Hhhh----hhhc---C---CCEEEEEcccccccCC
Q 021928 161 ------RGVRSIICPSEG----F----------------------ISNA----GSLK---G---VQHVILLSQLSVYRGS 198 (305)
Q Consensus 161 ------~~~d~Vi~~~~g----~----------------------~~~~----a~~~---g---v~~~V~iSS~~~~~~~ 198 (305)
..+|++|++++. . +..+ .++. + -.+||++||.....+.
T Consensus 85 ~~~~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~ 164 (286)
T PRK07791 85 AAVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAGLQGS 164 (286)
T ss_pred HHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCchhhCcCC
Confidence 356999987431 0 0011 1111 1 2589999998776655
Q ss_pred CCcccccchHH--HHHHHHHHHHHHhCCCCEEEEecCCcccCCCC-CcceeeecCCCCCCccCHHHHHHHHHHHhhCCC-
Q 021928 199 GGIQALMKGNA--RKLAEQDESMLMASGIPYTIIRTGVLQNTPGG-KQGFQFEEGCAANGSLSKEDAAFICVEALESIP- 274 (305)
Q Consensus 199 ~~~~~~~~~~~--~~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~-~~~~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~- 274 (305)
.+...|..++. ..+.+.....+...++.++.|.||..++.... .....-..........+++|+|.+++.++....
T Consensus 165 ~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~Pg~~T~~~~~~~~~~~~~~~~~~~~~~~pedva~~~~~L~s~~~~ 244 (286)
T PRK07791 165 VGQGNYSAAKAGIAALTLVAAAELGRYGVTVNAIAPAARTRMTETVFAEMMAKPEEGEFDAMAPENVSPLVVWLGSAESR 244 (286)
T ss_pred CCchhhHHHHHHHHHHHHHHHHHHHHhCeEEEEECCCCCCCcchhhHHHHHhcCcccccCCCCHHHHHHHHHHHhCchhc
Confidence 55555554332 11222222334568999999999832221110 000000001111235789999999999986533
Q ss_pred -CCCcEEEEecCCc
Q 021928 275 -QTGLIFEVVNGEE 287 (305)
Q Consensus 275 -~~~~~~~v~~g~~ 287 (305)
..|+.+.+.+|..
T Consensus 245 ~itG~~i~vdgG~~ 258 (286)
T PRK07791 245 DVTGKVFEVEGGKI 258 (286)
T ss_pred CCCCcEEEEcCCce
Confidence 4688888887753
|
|
| >PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.46 E-value=5.8e-12 Score=116.21 Aligned_cols=190 Identities=15% Similarity=0.091 Sum_probs=116.8
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcch-hh---h---hcCCCcEEeecCCCCHHHHHHHhc------C
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-AM---E---SFGTYVESMAGDASNKKFLKTALR------G 162 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~-~~---~---~~~~~v~~v~~D~~d~~~~~~~~~------~ 162 (305)
..+++++||||+|+||++++++|+++|++|++..++... .. + ..+.++.++.+|++|.+++.++++ .
T Consensus 10 l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~~g~ 89 (306)
T PRK07792 10 LSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVGLGG 89 (306)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHhCC
Confidence 346899999999999999999999999999998875322 11 1 123468899999999888776654 5
Q ss_pred ccEEEECCcch--------------------------Hhhhh----hhc-------CCCEEEEEcccccccCCCCccccc
Q 021928 163 VRSIICPSEGF--------------------------ISNAG----SLK-------GVQHVILLSQLSVYRGSGGIQALM 205 (305)
Q Consensus 163 ~d~Vi~~~~g~--------------------------~~~~a----~~~-------gv~~~V~iSS~~~~~~~~~~~~~~ 205 (305)
+|++||+++.. +..++ +.. .-.+||++||.....+......|.
T Consensus 90 iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~ 169 (306)
T PRK07792 90 LDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLVGPVGQANYG 169 (306)
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCcccccCCCCCchHH
Confidence 79999884310 11111 110 125899999987665544444454
Q ss_pred chHHH--HHHHHHHHHHHhCCCCEEEEecCCcccCCCCCcceeeecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEEE
Q 021928 206 KGNAR--KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFE 281 (305)
Q Consensus 206 ~~~~~--~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~~~~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~ 281 (305)
..+.. .+.+.....+...++.+..|.||..+....................++++|+|.+++.++.... ..|++|.
T Consensus 170 asKaal~~l~~~la~e~~~~gI~vn~i~Pg~~t~~~~~~~~~~~~~~~~~~~~~~pe~va~~v~~L~s~~~~~~tG~~~~ 249 (306)
T PRK07792 170 AAKAGITALTLSAARALGRYGVRANAICPRARTAMTADVFGDAPDVEAGGIDPLSPEHVVPLVQFLASPAAAEVNGQVFI 249 (306)
T ss_pred HHHHHHHHHHHHHHHHhhhcCeEEEEECCCCCCchhhhhccccchhhhhccCCCCHHHHHHHHHHHcCccccCCCCCEEE
Confidence 43321 1111112234457899999999852221110000000000112345689999999999886533 4567777
Q ss_pred EecC
Q 021928 282 VVNG 285 (305)
Q Consensus 282 v~~g 285 (305)
+.+|
T Consensus 250 v~gg 253 (306)
T PRK07792 250 VYGP 253 (306)
T ss_pred EcCC
Confidence 7643
|
|
| >PRK06079 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.46 E-value=3.9e-12 Score=113.92 Aligned_cols=189 Identities=12% Similarity=0.102 Sum_probs=119.0
Q ss_pred CCCEEEEEcCC--ChHHHHHHHHHHhCCCeEEEEEcCcchh---hhhcCCCcEEeecCCCCHHHHHHHhc-------Ccc
Q 021928 97 ARDAVLVTDGD--SDIGQMVILSLIVKRTRIKALVKDKRNA---MESFGTYVESMAGDASNKKFLKTALR-------GVR 164 (305)
Q Consensus 97 ~~~~vlVtGat--G~iG~~l~~~L~~~g~~V~~~~R~~~~~---~~~~~~~v~~v~~D~~d~~~~~~~~~-------~~d 164 (305)
.+|+++||||+ ++||++++++|+++|++|++..|+.+.. .+.....+.++++|++|.++++++++ .+|
T Consensus 6 ~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD 85 (252)
T PRK06079 6 SGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQNDRMKKSLQKLVDEEDLLVECDVASDESIERAFATIKERVGKID 85 (252)
T ss_pred CCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCchHHHHHHHhhccCceeEEeCCCCCHHHHHHHHHHHHHHhCCCC
Confidence 35899999999 7999999999999999999999874221 11223357889999999888776543 479
Q ss_pred EEEECCc--------chH----------------------hhhh-hh-cCCCEEEEEcccccccCCCCcccccchHH--H
Q 021928 165 SIICPSE--------GFI----------------------SNAG-SL-KGVQHVILLSQLSVYRGSGGIQALMKGNA--R 210 (305)
Q Consensus 165 ~Vi~~~~--------g~~----------------------~~~a-~~-~gv~~~V~iSS~~~~~~~~~~~~~~~~~~--~ 210 (305)
++|++++ +.+ ...+ .. ..-.++|++||.....+......|..+++ .
T Consensus 86 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~~~~~~~~Y~asKaal~ 165 (252)
T PRK06079 86 GIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNPGASIVTLTYFGSERAIPNYNVMGIAKAALE 165 (252)
T ss_pred EEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcccCceEEEEeccCccccCCcchhhHHHHHHHH
Confidence 9998732 100 0000 00 11258999999876654444444433322 2
Q ss_pred HHHHHHHHHHHhCCCCEEEEecCCcccCCCCC---c-ce--eeecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEEEE
Q 021928 211 KLAEQDESMLMASGIPYTIIRTGVLQNTPGGK---Q-GF--QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEV 282 (305)
Q Consensus 211 ~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~---~-~~--~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~v 282 (305)
.+.+.....+...|+.++.|.||.+....... . .. .+....+...+..++|||+++..++.... ..++++.+
T Consensus 166 ~l~~~la~el~~~gI~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~~~~l~s~~~~~itG~~i~v 245 (252)
T PRK06079 166 SSVRYLARDLGKKGIRVNAISAGAVKTLAVTGIKGHKDLLKESDSRTVDGVGVTIEEVGNTAAFLLSDLSTGVTGDIIYV 245 (252)
T ss_pred HHHHHHHHHhhhcCcEEEEEecCcccccccccCCChHHHHHHHHhcCcccCCCCHHHHHHHHHHHhCcccccccccEEEe
Confidence 22222233355679999999999974332110 0 00 00011112346788999999999997543 35788877
Q ss_pred ecC
Q 021928 283 VNG 285 (305)
Q Consensus 283 ~~g 285 (305)
.+|
T Consensus 246 dgg 248 (252)
T PRK06079 246 DKG 248 (252)
T ss_pred CCc
Confidence 765
|
|
| >PRK08703 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.46 E-value=4.8e-12 Score=112.01 Aligned_cols=181 Identities=12% Similarity=0.030 Sum_probs=112.6
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh-------cCCCcEEeecCCCC--HHHHHHH-------h
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------FGTYVESMAGDASN--KKFLKTA-------L 160 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~-------~~~~v~~v~~D~~d--~~~~~~~-------~ 160 (305)
.+++|+||||+|+||++++++|+++|++|++++|+++...+. ....+.++.+|+.+ .+++.++ +
T Consensus 5 ~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~~ 84 (239)
T PRK08703 5 SDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEAT 84 (239)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHHh
Confidence 358999999999999999999999999999999998653321 12246778899875 3333332 3
Q ss_pred -cCccEEEECCcch-------------------------------HhhhhhhcCCCEEEEEcccccccCCCCcccccchH
Q 021928 161 -RGVRSIICPSEGF-------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGN 208 (305)
Q Consensus 161 -~~~d~Vi~~~~g~-------------------------------~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~ 208 (305)
..+|.||++++.. +.....+.+..++|++||.....+......|..++
T Consensus 85 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK 164 (239)
T PRK08703 85 QGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVGESHGETPKAYWGGFGASK 164 (239)
T ss_pred CCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCCCEEEEEeccccccCCCCccchHHhH
Confidence 4679999874310 01112334567999999977665544444454433
Q ss_pred HH--HHHHHHHHHHHhC-CCCEEEEecCCcccCCCCCcceeeecCCCCCCccCHHHHHHHHHHHhhC--CCCCCcEEE
Q 021928 209 AR--KLAEQDESMLMAS-GIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALES--IPQTGLIFE 281 (305)
Q Consensus 209 ~~--~~~~~aE~~l~~~-gi~~tilRPg~l~~~~~~~~~~~~~~~~~~~~~Is~~DvA~~iv~~l~~--~~~~~~~~~ 281 (305)
+. .+.+.....+... ++.++.|+||.+....... .. .+.....+...+|++..++.++.. ....|++..
T Consensus 165 aa~~~~~~~la~e~~~~~~i~v~~v~pG~v~t~~~~~--~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 238 (239)
T PRK08703 165 AALNYLCKVAADEWERFGNLRANVLVPGPINSPQRIK--SH--PGEAKSERKSYGDVLPAFVWWASAESKGRSGEIVY 238 (239)
T ss_pred HHHHHHHHHHHHHhccCCCeEEEEEecCcccCccccc--cC--CCCCccccCCHHHHHHHHHHHhCccccCcCCeEee
Confidence 21 1111111112222 6999999999975432211 00 112223567999999999999973 223455543
|
|
| >PRK07578 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.46 E-value=2.8e-12 Score=110.50 Aligned_cols=165 Identities=16% Similarity=0.196 Sum_probs=109.5
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhc---CccEEEECCcc---
Q 021928 99 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR---GVRSIICPSEG--- 172 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~---~~d~Vi~~~~g--- 172 (305)
|+++||||+|+||++++++|+++ ++|+++.|++. .+.+|++|.++++++++ ++|++|++++.
T Consensus 1 ~~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~-----------~~~~D~~~~~~~~~~~~~~~~id~lv~~ag~~~~ 68 (199)
T PRK07578 1 MKILVIGASGTIGRAVVAELSKR-HEVITAGRSSG-----------DVQVDITDPASIRALFEKVGKVDAVVSAAGKVHF 68 (199)
T ss_pred CeEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC-----------ceEecCCChHHHHHHHHhcCCCCEEEECCCCCCC
Confidence 57999999999999999999999 99999999753 46789999998888776 57999988431
Q ss_pred -h----------------------Hhhhhhh--cCCCEEEEEcccccccCCCCcccccchHH--HHHHHHHHHHHHhCCC
Q 021928 173 -F----------------------ISNAGSL--KGVQHVILLSQLSVYRGSGGIQALMKGNA--RKLAEQDESMLMASGI 225 (305)
Q Consensus 173 -~----------------------~~~~a~~--~gv~~~V~iSS~~~~~~~~~~~~~~~~~~--~~~~~~aE~~l~~~gi 225 (305)
. +..++.. .+..+||++||.....+.+....|..++. ..+.+.....+ ..++
T Consensus 69 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~-~~gi 147 (199)
T PRK07578 69 APLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTSGILSDEPIPGGASAATVNGALEGFVKAAALEL-PRGI 147 (199)
T ss_pred CchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcccccCCCCCCchHHHHHHHHHHHHHHHHHHHc-cCCe
Confidence 0 0111111 12357999998877655444444443322 11111111123 5789
Q ss_pred CEEEEecCCcccCCCCCcceeeecCCCCCCccCHHHHHHHHHHHhhCCCCCCcEEEE
Q 021928 226 PYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEV 282 (305)
Q Consensus 226 ~~tilRPg~l~~~~~~~~~~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~~~~~~~~v 282 (305)
.++.|.||++.+....... .+ .....++++|+|+.+..+++. ...|++|++
T Consensus 148 ~v~~i~Pg~v~t~~~~~~~-~~----~~~~~~~~~~~a~~~~~~~~~-~~~g~~~~~ 198 (199)
T PRK07578 148 RINVVSPTVLTESLEKYGP-FF----PGFEPVPAARVALAYVRSVEG-AQTGEVYKV 198 (199)
T ss_pred EEEEEcCCcccCchhhhhh-cC----CCCCCCCHHHHHHHHHHHhcc-ceeeEEecc
Confidence 9999999997543221110 01 123568999999999999975 355666664
|
|
| >PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.46 E-value=6.4e-12 Score=111.78 Aligned_cols=181 Identities=11% Similarity=0.095 Sum_probs=114.2
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh-------cCCCcEEeecCCC--CHHHHH-------HHh
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------FGTYVESMAGDAS--NKKFLK-------TAL 160 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~-------~~~~v~~v~~D~~--d~~~~~-------~~~ 160 (305)
+.++|+||||+|+||.+++++|+++|++|++++|++++..+. ...++.++.+|+. +.+++. +.+
T Consensus 11 ~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 90 (247)
T PRK08945 11 KDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIEEQF 90 (247)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHHHHh
Confidence 458999999999999999999999999999999987552211 1235678888886 444443 333
Q ss_pred cCccEEEECCcch---------------------------Hhh----hhhhcCCCEEEEEcccccccCCCCcccccchHH
Q 021928 161 RGVRSIICPSEGF---------------------------ISN----AGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA 209 (305)
Q Consensus 161 ~~~d~Vi~~~~g~---------------------------~~~----~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~ 209 (305)
..+|.|||+++.. +.. ...+.+.++||++||.....+......|..++.
T Consensus 91 ~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~ 170 (247)
T PRK08945 91 GRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSSSVGRQGRANWGAYAVSKF 170 (247)
T ss_pred CCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEEccHhhcCCCCCCcccHHHHH
Confidence 4679999874310 111 123456789999999876655444545543332
Q ss_pred HH--HHHHHHHHHHhCCCCEEEEecCCcccCCCCCcceeeecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEEE
Q 021928 210 RK--LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFE 281 (305)
Q Consensus 210 ~~--~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~~~~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~ 281 (305)
.. ..+.....+...++.++.++||.+........ + .......+...+|+++.+..++.++. ..|+++.
T Consensus 171 a~~~~~~~~~~~~~~~~i~~~~v~pg~v~t~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 242 (247)
T PRK08945 171 ATEGMMQVLADEYQGTNLRVNCINPGGTRTAMRASA---F-PGEDPQKLKTPEDIMPLYLYLMGDDSRRKNGQSFD 242 (247)
T ss_pred HHHHHHHHHHHHhcccCEEEEEEecCCccCcchhhh---c-CcccccCCCCHHHHHHHHHHHhCccccccCCeEEe
Confidence 11 11111111233578999999998753321110 1 11122357899999999999886544 3455543
|
|
| >PRK05599 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.45 E-value=8e-12 Score=111.52 Aligned_cols=176 Identities=15% Similarity=0.124 Sum_probs=114.6
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh------cC-CCcEEeecCCCCHHHHHHHh-------cCcc
Q 021928 99 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FG-TYVESMAGDASNKKFLKTAL-------RGVR 164 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~-~~v~~v~~D~~d~~~~~~~~-------~~~d 164 (305)
|+++||||+++||++++++|+ +|++|+++.|++++..+. .+ ..+.++.+|+.|.+++++++ ..+|
T Consensus 1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id 79 (246)
T PRK05599 1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGEIS 79 (246)
T ss_pred CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCCCC
Confidence 679999999999999999998 599999999987664321 12 24788999999988877654 3579
Q ss_pred EEEECCcch------------------------------HhhhhhhcC-CCEEEEEcccccccCCCCcccccchHHH--H
Q 021928 165 SIICPSEGF------------------------------ISNAGSLKG-VQHVILLSQLSVYRGSGGIQALMKGNAR--K 211 (305)
Q Consensus 165 ~Vi~~~~g~------------------------------~~~~a~~~g-v~~~V~iSS~~~~~~~~~~~~~~~~~~~--~ 211 (305)
++|++++-. +.....+.+ -.+||++||.....+......|..+++. .
T Consensus 80 ~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~ 159 (246)
T PRK05599 80 LAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGWRARRANYVYGSTKAGLDA 159 (246)
T ss_pred EEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEeccccccCCcCCcchhhHHHHHHH
Confidence 999773210 001122222 3689999998776655555555544321 1
Q ss_pred HHHHHHHHHHhCCCCEEEEecCCcccCCCCCcceeeecCCCCCCccCHHHHHHHHHHHhhCCCCCCcEEEEe
Q 021928 212 LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVV 283 (305)
Q Consensus 212 ~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~~~~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~~~~~~~~v~ 283 (305)
+.+.....+...++.++.+.||.+......... ......+++|+|+.++.++..... .+.+.+.
T Consensus 160 ~~~~la~el~~~~I~v~~v~PG~v~T~~~~~~~-------~~~~~~~pe~~a~~~~~~~~~~~~-~~~~~~~ 223 (246)
T PRK05599 160 FCQGLADSLHGSHVRLIIARPGFVIGSMTTGMK-------PAPMSVYPRDVAAAVVSAITSSKR-STTLWIP 223 (246)
T ss_pred HHHHHHHHhcCCCceEEEecCCcccchhhcCCC-------CCCCCCCHHHHHHHHHHHHhcCCC-CceEEeC
Confidence 222222334567899999999997543211110 001136899999999999987543 3344444
|
|
| >PLN02780 ketoreductase/ oxidoreductase | Back alignment and domain information |
|---|
Probab=99.44 E-value=5.4e-12 Score=117.27 Aligned_cols=168 Identities=13% Similarity=0.053 Sum_probs=109.4
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh-------c-CCCcEEeecCCCC--HHH---HHHHhcC--
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------F-GTYVESMAGDASN--KKF---LKTALRG-- 162 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~-------~-~~~v~~v~~D~~d--~~~---~~~~~~~-- 162 (305)
+++++||||+|+||++++++|+++|++|++++|++++..+. . ..++..+.+|+++ .+. +.+.+.+
T Consensus 53 g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~~d 132 (320)
T PLN02780 53 GSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIEGLD 132 (320)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhcCCC
Confidence 58999999999999999999999999999999998764321 1 1356778899985 233 3444554
Q ss_pred ccEEEECCc------ch--------------------------HhhhhhhcCCCEEEEEccccccc-C-CCCcccccchH
Q 021928 163 VRSIICPSE------GF--------------------------ISNAGSLKGVQHVILLSQLSVYR-G-SGGIQALMKGN 208 (305)
Q Consensus 163 ~d~Vi~~~~------g~--------------------------~~~~a~~~gv~~~V~iSS~~~~~-~-~~~~~~~~~~~ 208 (305)
+|++|++++ .. +.....+.+..+||++||..++. + .+....|..++
T Consensus 133 idilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~p~~~~Y~aSK 212 (320)
T PLN02780 133 VGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIINIGSGAAIVIPSDPLYAVYAATK 212 (320)
T ss_pred ccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCCCCccchHHHHHH
Confidence 458887632 10 01112345667999999987753 2 23344454433
Q ss_pred H--HHHHHHHHHHHHhCCCCEEEEecCCcccCCCCCcceeeecCCCCCCccCHHHHHHHHHHHhhC
Q 021928 209 A--RKLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALES 272 (305)
Q Consensus 209 ~--~~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~~~~~~~~~~~~~~~Is~~DvA~~iv~~l~~ 272 (305)
+ ..+.+.....+...|++++.+.||++........ ......++++++|+.++..+..
T Consensus 213 aal~~~~~~L~~El~~~gI~V~~v~PG~v~T~~~~~~-------~~~~~~~~p~~~A~~~~~~~~~ 271 (320)
T PLN02780 213 AYIDQFSRCLYVEYKKSGIDVQCQVPLYVATKMASIR-------RSSFLVPSSDGYARAALRWVGY 271 (320)
T ss_pred HHHHHHHHHHHHHHhccCeEEEEEeeCceecCccccc-------CCCCCCCCHHHHHHHHHHHhCC
Confidence 2 1222333334556799999999999754432111 0111246899999999999964
|
|
| >PRK05884 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.44 E-value=4.3e-12 Score=111.73 Aligned_cols=176 Identities=14% Similarity=0.120 Sum_probs=114.7
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcC-CCcEEeecCCCCHHHHHHHhc----CccEEEECCcc-
Q 021928 99 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG-TYVESMAGDASNKKFLKTALR----GVRSIICPSEG- 172 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~-~~v~~v~~D~~d~~~~~~~~~----~~d~Vi~~~~g- 172 (305)
|+++||||+|+||++++++|+++|++|+++.|+.++..+... .++.++.+|+.|.+++.++++ .+|.+|++++.
T Consensus 1 m~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~id~lv~~ag~~ 80 (223)
T PRK05884 1 VEVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKELDVDAIVCDNTDPASLEEARGLFPHHLDTIVNVPAPS 80 (223)
T ss_pred CeEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCcEEecCCCCHHHHHHHHHHHhhcCcEEEECCCcc
Confidence 479999999999999999999999999999998766433221 246789999999998887775 57999987320
Q ss_pred ---------hHh----h-----------------hh-hh-cCCCEEEEEcccccccCCCCcccccchHH--HHHHHHHHH
Q 021928 173 ---------FIS----N-----------------AG-SL-KGVQHVILLSQLSVYRGSGGIQALMKGNA--RKLAEQDES 218 (305)
Q Consensus 173 ---------~~~----~-----------------~a-~~-~gv~~~V~iSS~~~~~~~~~~~~~~~~~~--~~~~~~aE~ 218 (305)
.+. + ++ .. ..-.+||++||... .....|..+++ ..+.+....
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~Iv~isS~~~----~~~~~Y~asKaal~~~~~~la~ 156 (223)
T PRK05884 81 WDAGDPRTYSLADTANAWRNALDATVLSAVLTVQSVGDHLRSGGSIISVVPENP----PAGSAEAAIKAALSNWTAGQAA 156 (223)
T ss_pred ccCCCCcccchhcCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEEEEecCCC----CCccccHHHHHHHHHHHHHHHH
Confidence 000 0 00 00 11258999998751 12233433322 222223333
Q ss_pred HHHhCCCCEEEEecCCcccCCCCCcceeeecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEEEEecCC
Q 021928 219 MLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVNGE 286 (305)
Q Consensus 219 ~l~~~gi~~tilRPg~l~~~~~~~~~~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~v~~g~ 286 (305)
.+...++.++.|.||++....... . ... ..-..+|+|+.+..++..+. ..++++.+.+|.
T Consensus 157 e~~~~gI~v~~v~PG~v~t~~~~~--~----~~~--p~~~~~~ia~~~~~l~s~~~~~v~G~~i~vdgg~ 218 (223)
T PRK05884 157 VFGTRGITINAVACGRSVQPGYDG--L----SRT--PPPVAAEIARLALFLTTPAARHITGQTLHVSHGA 218 (223)
T ss_pred HhhhcCeEEEEEecCccCchhhhh--c----cCC--CCCCHHHHHHHHHHHcCchhhccCCcEEEeCCCe
Confidence 455678999999999964321110 0 001 11278999999999987543 367888887664
|
|
| >PRK07370 enoyl-(acyl carrier protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.42 E-value=9.6e-12 Score=111.85 Aligned_cols=187 Identities=13% Similarity=0.064 Sum_probs=117.3
Q ss_pred CCCEEEEEcCC--ChHHHHHHHHHHhCCCeEEEEEcCcch------hhhh--cCCCcEEeecCCCCHHHHHHHhc-----
Q 021928 97 ARDAVLVTDGD--SDIGQMVILSLIVKRTRIKALVKDKRN------AMES--FGTYVESMAGDASNKKFLKTALR----- 161 (305)
Q Consensus 97 ~~~~vlVtGat--G~iG~~l~~~L~~~g~~V~~~~R~~~~------~~~~--~~~~v~~v~~D~~d~~~~~~~~~----- 161 (305)
.+++++||||+ ++||++++++|++.|++|++..|+.+. ..+. ....+.++.+|++|.+++.++++
T Consensus 5 ~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~ 84 (258)
T PRK07370 5 TGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIKQK 84 (258)
T ss_pred CCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHHHH
Confidence 45899999986 799999999999999999887654321 1111 11246788999999988876653
Q ss_pred --CccEEEECCc--------chH--------------------------hhhhhhcCCCEEEEEcccccccCCCCccccc
Q 021928 162 --GVRSIICPSE--------GFI--------------------------SNAGSLKGVQHVILLSQLSVYRGSGGIQALM 205 (305)
Q Consensus 162 --~~d~Vi~~~~--------g~~--------------------------~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~ 205 (305)
.+|++|++++ +.+ ....++ -.+||++||.....+.+....|.
T Consensus 85 ~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~--~g~Iv~isS~~~~~~~~~~~~Y~ 162 (258)
T PRK07370 85 WGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSE--GGSIVTLTYLGGVRAIPNYNVMG 162 (258)
T ss_pred cCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhh--CCeEEEEeccccccCCcccchhh
Confidence 5799998733 110 001122 26899999987665444444444
Q ss_pred chHH--HHHHHHHHHHHHhCCCCEEEEecCCcccCCCC---C-cce--eeecCCCCCCccCHHHHHHHHHHHhhCCC--C
Q 021928 206 KGNA--RKLAEQDESMLMASGIPYTIIRTGVLQNTPGG---K-QGF--QFEEGCAANGSLSKEDAAFICVEALESIP--Q 275 (305)
Q Consensus 206 ~~~~--~~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~---~-~~~--~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~ 275 (305)
..++ ..+.+.....+...++.++.|.||++...... . ... ..........+...+|+|.++..++.++. .
T Consensus 163 asKaal~~l~~~la~el~~~gI~Vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~~~fl~s~~~~~~ 242 (258)
T PRK07370 163 VAKAALEASVRYLAAELGPKNIRVNAISAGPIRTLASSAVGGILDMIHHVEEKAPLRRTVTQTEVGNTAAFLLSDLASGI 242 (258)
T ss_pred HHHHHHHHHHHHHHHHhCcCCeEEEEEecCcccCchhhccccchhhhhhhhhcCCcCcCCCHHHHHHHHHHHhChhhccc
Confidence 4332 11222233334567899999999996433210 0 000 00001112345678999999999997543 3
Q ss_pred CCcEEEEecC
Q 021928 276 TGLIFEVVNG 285 (305)
Q Consensus 276 ~~~~~~v~~g 285 (305)
.++++.+.+|
T Consensus 243 tG~~i~vdgg 252 (258)
T PRK07370 243 TGQTIYVDAG 252 (258)
T ss_pred cCcEEEECCc
Confidence 5788888765
|
|
| >PRK09009 C factor cell-cell signaling protein; Provisional | Back alignment and domain information |
|---|
Probab=99.41 E-value=2e-11 Score=107.68 Aligned_cols=181 Identities=11% Similarity=0.072 Sum_probs=110.1
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCC--CeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHH---hcCccEEEECCcch
Q 021928 99 DAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA---LRGVRSIICPSEGF 173 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~~~g--~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~---~~~~d~Vi~~~~g~ 173 (305)
|+|+||||+|+||++++++|+++| ..|.+..|+.... ....++.++++|++|.++++++ +.++|++|++++..
T Consensus 1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~--~~~~~~~~~~~Dls~~~~~~~~~~~~~~id~li~~aG~~ 78 (235)
T PRK09009 1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPD--FQHDNVQWHALDVTDEAEIKQLSEQFTQLDWLINCVGML 78 (235)
T ss_pred CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCccc--cccCceEEEEecCCCHHHHHHHHHhcCCCCEEEECCccc
Confidence 589999999999999999999986 5666666654322 1234688999999998876654 45789999883311
Q ss_pred ------------------------------------HhhhhhhcCCCEEEEEcccccccC---CCCcccccchHHH--HH
Q 021928 174 ------------------------------------ISNAGSLKGVQHVILLSQLSVYRG---SGGIQALMKGNAR--KL 212 (305)
Q Consensus 174 ------------------------------------~~~~a~~~gv~~~V~iSS~~~~~~---~~~~~~~~~~~~~--~~ 212 (305)
+...+++.+..+++++||...... ..+...|..+++. .+
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~~~i~~iss~~~~~~~~~~~~~~~Y~asK~a~~~~ 158 (235)
T PRK09009 79 HTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSESAKFAVISAKVGSISDNRLGGWYSYRASKAALNMF 158 (235)
T ss_pred cccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCCceEEEEeecccccccCCCCCcchhhhhHHHHHHH
Confidence 001123344568999887533211 1122234332211 11
Q ss_pred HHHHHHHHHh--CCCCEEEEecCCcccCCCCCcceeeecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEEEEecC
Q 021928 213 AEQDESMLMA--SGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVNG 285 (305)
Q Consensus 213 ~~~aE~~l~~--~gi~~tilRPg~l~~~~~~~~~~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~v~~g 285 (305)
.+..-..+.. .++.+..+.||++........ ........+++.+|+|+.++.++.... ..+..+.+.++
T Consensus 159 ~~~la~e~~~~~~~i~v~~v~PG~v~t~~~~~~----~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~~g~ 231 (235)
T PRK09009 159 LKTLSIEWQRSLKHGVVLALHPGTTDTALSKPF----QQNVPKGKLFTPEYVAQCLLGIIANATPAQSGSFLAYDGE 231 (235)
T ss_pred HHHHHHHhhcccCCeEEEEEcccceecCCCcch----hhccccCCCCCHHHHHHHHHHHHHcCChhhCCcEEeeCCc
Confidence 1111111222 478899999999654332111 111122346899999999999998654 35666666544
|
|
| >PRK06940 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.41 E-value=1.4e-11 Score=111.84 Aligned_cols=186 Identities=14% Similarity=0.100 Sum_probs=114.0
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh------cCCCcEEeecCCCCHHHHHHHhc------Ccc
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR------GVR 164 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~~~v~~v~~D~~d~~~~~~~~~------~~d 164 (305)
++|+++|||| |+||++++++|. +|++|++++|++++..+. .+.++.++.+|++|.+++.++++ .+|
T Consensus 1 ~~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~~g~id 78 (275)
T PRK06940 1 MKEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATAQTLGPVT 78 (275)
T ss_pred CCCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHhcCCCC
Confidence 3588999998 799999999996 899999999987553221 12357889999999988877664 579
Q ss_pred EEEECCcch-------------------Hhhh----hhhcCCCEEEEEcccccccCC-----------------------
Q 021928 165 SIICPSEGF-------------------ISNA----GSLKGVQHVILLSQLSVYRGS----------------------- 198 (305)
Q Consensus 165 ~Vi~~~~g~-------------------~~~~----a~~~gv~~~V~iSS~~~~~~~----------------------- 198 (305)
.+|++++-. +.+. .+.. .++|++||.......
T Consensus 79 ~li~nAG~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~--g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (275)
T PRK06940 79 GLVHTAGVSPSQASPEAILKVDLYGTALVLEEFGKVIAPG--GAGVVIASQSGHRLPALTAEQERALATTPTEELLSLPF 156 (275)
T ss_pred EEEECCCcCCchhhHHHHHHHhhHHHHHHHHHHHHHHhhC--CCEEEEEecccccCcccchhhhcccccccccccccccc
Confidence 999884310 1111 1222 356777776554321
Q ss_pred -------CCcccccchHHH--HHHHHHHHHHHhCCCCEEEEecCCcccCCCCC--c---ce---eeecCCCCCCccCHHH
Q 021928 199 -------GGIQALMKGNAR--KLAEQDESMLMASGIPYTIIRTGVLQNTPGGK--Q---GF---QFEEGCAANGSLSKED 261 (305)
Q Consensus 199 -------~~~~~~~~~~~~--~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~--~---~~---~~~~~~~~~~~Is~~D 261 (305)
.....|..+++. .+.+.....+...++.++.|.||++....... . .. ..........+...+|
T Consensus 157 ~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gIrvn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pee 236 (275)
T PRK06940 157 LQPDAIEDSLHAYQIAKRANALRVMAEAVKWGERGARINSISPGIISTPLAQDELNGPRGDGYRNMFAKSPAGRPGTPDE 236 (275)
T ss_pred ccccccCCccchhHHHHHHHHHHHHHHHHHHccCCeEEEEeccCcCcCccchhhhcCCchHHHHHHhhhCCcccCCCHHH
Confidence 011223332221 11111122244578999999999964332110 0 00 0000111234678899
Q ss_pred HHHHHHHHhhCCC--CCCcEEEEecCC
Q 021928 262 AAFICVEALESIP--QTGLIFEVVNGE 286 (305)
Q Consensus 262 vA~~iv~~l~~~~--~~~~~~~v~~g~ 286 (305)
+|++++.++.... ..++.+.+.+|.
T Consensus 237 ia~~~~fL~s~~~~~itG~~i~vdgg~ 263 (275)
T PRK06940 237 IAALAEFLMGPRGSFITGSDFLVDGGA 263 (275)
T ss_pred HHHHHHHHcCcccCcccCceEEEcCCe
Confidence 9999999986543 367888887664
|
|
| >PRK08415 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.41 E-value=1e-11 Score=112.84 Aligned_cols=187 Identities=14% Similarity=0.074 Sum_probs=118.0
Q ss_pred CCCEEEEEcCC--ChHHHHHHHHHHhCCCeEEEEEcCcc---hhh---hhcCCCcEEeecCCCCHHHHHHHhc-------
Q 021928 97 ARDAVLVTDGD--SDIGQMVILSLIVKRTRIKALVKDKR---NAM---ESFGTYVESMAGDASNKKFLKTALR------- 161 (305)
Q Consensus 97 ~~~~vlVtGat--G~iG~~l~~~L~~~g~~V~~~~R~~~---~~~---~~~~~~v~~v~~D~~d~~~~~~~~~------- 161 (305)
.+|+++||||+ ++||++++++|+++|++|++..|+.+ ... +..+.. .++.+|++|.+++.++++
T Consensus 4 ~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~~~~~~~~~~~~~~-~~~~~Dv~d~~~v~~~~~~i~~~~g 82 (274)
T PRK08415 4 KGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQELGSD-YVYELDVSKPEHFKSLAESLKKDLG 82 (274)
T ss_pred CCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCc-eEEEecCCCHHHHHHHHHHHHHHcC
Confidence 35899999997 79999999999999999999998742 111 112333 678999999888776553
Q ss_pred CccEEEECCcc--------hH--------------------------hhhhhhcCCCEEEEEcccccccCCCCcccccch
Q 021928 162 GVRSIICPSEG--------FI--------------------------SNAGSLKGVQHVILLSQLSVYRGSGGIQALMKG 207 (305)
Q Consensus 162 ~~d~Vi~~~~g--------~~--------------------------~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~ 207 (305)
.+|++|++++- .+ ....++ + .+||++||.+...+.+....|..+
T Consensus 83 ~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~-~-g~Iv~isS~~~~~~~~~~~~Y~as 160 (274)
T PRK08415 83 KIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLND-G-ASVLTLSYLGGVKYVPHYNVMGVA 160 (274)
T ss_pred CCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhcc-C-CcEEEEecCCCccCCCcchhhhhH
Confidence 46999987331 00 001122 2 589999998765544444444443
Q ss_pred HH--HHHHHHHHHHHHhCCCCEEEEecCCcccCCCCC-cc----eeee-cCCCCCCccCHHHHHHHHHHHhhCCC--CCC
Q 021928 208 NA--RKLAEQDESMLMASGIPYTIIRTGVLQNTPGGK-QG----FQFE-EGCAANGSLSKEDAAFICVEALESIP--QTG 277 (305)
Q Consensus 208 ~~--~~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~-~~----~~~~-~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~ 277 (305)
++ ..+.+.....+...++.+..|.||++....... .. ..+. ...+...+..++|||.+++.++.... ..+
T Consensus 161 Kaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~r~~~pedva~~v~fL~s~~~~~itG 240 (274)
T PRK08415 161 KAALESSVRYLAVDLGKKGIRVNAISAGPIKTLAASGIGDFRMILKWNEINAPLKKNVSIEEVGNSGMYLLSDLSSGVTG 240 (274)
T ss_pred HHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHhccchhhHHhhhhhhhCchhccCCHHHHHHHHHHHhhhhhhcccc
Confidence 32 112222223345679999999999964321100 00 0000 00112345788999999999997543 467
Q ss_pred cEEEEecCC
Q 021928 278 LIFEVVNGE 286 (305)
Q Consensus 278 ~~~~v~~g~ 286 (305)
+.+.+.+|.
T Consensus 241 ~~i~vdGG~ 249 (274)
T PRK08415 241 EIHYVDAGY 249 (274)
T ss_pred cEEEEcCcc
Confidence 888887663
|
|
| >PRK08690 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.41 E-value=1.4e-11 Score=111.01 Aligned_cols=189 Identities=12% Similarity=0.076 Sum_probs=119.2
Q ss_pred CCCEEEEEcC--CChHHHHHHHHHHhCCCeEEEEEcCcch---hhhhc--CCCcEEeecCCCCHHHHHHHhc-------C
Q 021928 97 ARDAVLVTDG--DSDIGQMVILSLIVKRTRIKALVKDKRN---AMESF--GTYVESMAGDASNKKFLKTALR-------G 162 (305)
Q Consensus 97 ~~~~vlVtGa--tG~iG~~l~~~L~~~g~~V~~~~R~~~~---~~~~~--~~~v~~v~~D~~d~~~~~~~~~-------~ 162 (305)
.+++++|||| +++||++++++|+++|++|++..|+... ..+.. ......+++|++|.+++.++++ .
T Consensus 5 ~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 84 (261)
T PRK08690 5 QGKKILITGMISERSIAYGIAKACREQGAELAFTYVVDKLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHWDG 84 (261)
T ss_pred CCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHHhCC
Confidence 3589999997 6799999999999999999988765321 11111 1234678999999988876663 5
Q ss_pred ccEEEECCcc---------hHhh--------------------------hhhhcCCCEEEEEcccccccCCCCcccccch
Q 021928 163 VRSIICPSEG---------FISN--------------------------AGSLKGVQHVILLSQLSVYRGSGGIQALMKG 207 (305)
Q Consensus 163 ~d~Vi~~~~g---------~~~~--------------------------~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~ 207 (305)
+|++|++++- .+.+ ..+ .+-.+||++||.+...+.+....|..+
T Consensus 85 iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~-~~~g~Iv~iss~~~~~~~~~~~~Y~as 163 (261)
T PRK08690 85 LDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMR-GRNSAIVALSYLGAVRAIPNYNVMGMA 163 (261)
T ss_pred CcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhh-hcCcEEEEEcccccccCCCCcccchhH
Confidence 7999987321 0000 011 122589999998776554444445443
Q ss_pred HH--HHHHHHHHHHHHhCCCCEEEEecCCcccCCCCC----cce--eeecCCCCCCccCHHHHHHHHHHHhhCCC--CCC
Q 021928 208 NA--RKLAEQDESMLMASGIPYTIIRTGVLQNTPGGK----QGF--QFEEGCAANGSLSKEDAAFICVEALESIP--QTG 277 (305)
Q Consensus 208 ~~--~~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~----~~~--~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~ 277 (305)
+. ..+.+.....+...++.++.|.||++....... ... .+........+..++|||++++.++.+.. ..+
T Consensus 164 Kaal~~l~~~la~e~~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~v~~l~s~~~~~~tG 243 (261)
T PRK08690 164 KASLEAGIRFTAACLGKEGIRCNGISAGPIKTLAASGIADFGKLLGHVAAHNPLRRNVTIEEVGNTAAFLLSDLSSGITG 243 (261)
T ss_pred HHHHHHHHHHHHHHhhhcCeEEEEEecCcccchhhhcCCchHHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCcccCCcce
Confidence 32 112222233455689999999999964322110 000 00011122345789999999999997543 367
Q ss_pred cEEEEecCC
Q 021928 278 LIFEVVNGE 286 (305)
Q Consensus 278 ~~~~v~~g~ 286 (305)
+++.+.+|.
T Consensus 244 ~~i~vdgG~ 252 (261)
T PRK08690 244 EITYVDGGY 252 (261)
T ss_pred eEEEEcCCc
Confidence 888887664
|
|
| >PRK08594 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.41 E-value=1.3e-11 Score=111.03 Aligned_cols=189 Identities=13% Similarity=0.125 Sum_probs=118.5
Q ss_pred CCCEEEEEcCC--ChHHHHHHHHHHhCCCeEEEEEcCcc---hhh---hhc-CCCcEEeecCCCCHHHHHHHhc------
Q 021928 97 ARDAVLVTDGD--SDIGQMVILSLIVKRTRIKALVKDKR---NAM---ESF-GTYVESMAGDASNKKFLKTALR------ 161 (305)
Q Consensus 97 ~~~~vlVtGat--G~iG~~l~~~L~~~g~~V~~~~R~~~---~~~---~~~-~~~v~~v~~D~~d~~~~~~~~~------ 161 (305)
.+|+++||||+ ++||++++++|+++|++|+++.|+.. ... +.. +.++.++++|++|.+++.++++
T Consensus 6 ~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 85 (257)
T PRK08594 6 EGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFETIKEEV 85 (257)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHHhC
Confidence 45899999997 89999999999999999999877532 111 112 2457889999999888776553
Q ss_pred -CccEEEECCc--------chH----------------------hhhhh-h-cCCCEEEEEcccccccCCCCcccccchH
Q 021928 162 -GVRSIICPSE--------GFI----------------------SNAGS-L-KGVQHVILLSQLSVYRGSGGIQALMKGN 208 (305)
Q Consensus 162 -~~d~Vi~~~~--------g~~----------------------~~~a~-~-~gv~~~V~iSS~~~~~~~~~~~~~~~~~ 208 (305)
.+|.+|++++ +.+ ...+. . ..-.+||++||.....+.+....|..++
T Consensus 86 g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asK 165 (257)
T PRK08594 86 GVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGGSIVTLTYLGGERVVQNYNVMGVAK 165 (257)
T ss_pred CCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCceEEEEcccCCccCCCCCchhHHHH
Confidence 4699998732 100 00010 0 1125899999987765544444454433
Q ss_pred H--HHHHHHHHHHHHhCCCCEEEEecCCcccCCCCC----cce--eeecCCCCCCccCHHHHHHHHHHHhhCCC--CCCc
Q 021928 209 A--RKLAEQDESMLMASGIPYTIIRTGVLQNTPGGK----QGF--QFEEGCAANGSLSKEDAAFICVEALESIP--QTGL 278 (305)
Q Consensus 209 ~--~~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~----~~~--~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~ 278 (305)
+ ..+.+.....+...++.++.|.||.+....... ... ..........+.+++|+|++++.++.... ..++
T Consensus 166 aal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~~va~~~~~l~s~~~~~~tG~ 245 (257)
T PRK08594 166 ASLEASVKYLANDLGKDGIRVNAISAGPIRTLSAKGVGGFNSILKEIEERAPLRRTTTQEEVGDTAAFLFSDLSRGVTGE 245 (257)
T ss_pred HHHHHHHHHHHHHhhhcCCEEeeeecCcccCHhHhhhccccHHHHHHhhcCCccccCCHHHHHHHHHHHcCcccccccce
Confidence 2 112222233345679999999999965321100 000 00000112345788999999999997543 3577
Q ss_pred EEEEecC
Q 021928 279 IFEVVNG 285 (305)
Q Consensus 279 ~~~v~~g 285 (305)
.+.+.+|
T Consensus 246 ~~~~dgg 252 (257)
T PRK08594 246 NIHVDSG 252 (257)
T ss_pred EEEECCc
Confidence 7777655
|
|
| >PRK06505 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.41 E-value=1.9e-11 Score=110.93 Aligned_cols=187 Identities=12% Similarity=0.087 Sum_probs=118.6
Q ss_pred CCCEEEEEcCCC--hHHHHHHHHHHhCCCeEEEEEcCcch---hhhh---cCCCcEEeecCCCCHHHHHHHhc-------
Q 021928 97 ARDAVLVTDGDS--DIGQMVILSLIVKRTRIKALVKDKRN---AMES---FGTYVESMAGDASNKKFLKTALR------- 161 (305)
Q Consensus 97 ~~~~vlVtGatG--~iG~~l~~~L~~~g~~V~~~~R~~~~---~~~~---~~~~v~~v~~D~~d~~~~~~~~~------- 161 (305)
.+|+++||||++ +||++++++|+++|++|++..|+... ..+. .+ ...++++|++|.+++.++++
T Consensus 6 ~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~g-~~~~~~~Dv~d~~~v~~~~~~~~~~~g 84 (271)
T PRK06505 6 QGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPLAESLG-SDFVLPCDVEDIASVDAVFEALEKKWG 84 (271)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHHHHHHHHhcC-CceEEeCCCCCHHHHHHHHHHHHHHhC
Confidence 358999999997 99999999999999999999887532 1111 12 23578999999888776553
Q ss_pred CccEEEECCc--------chHh--------------------------hhhhhcCCCEEEEEcccccccCCCCcccccch
Q 021928 162 GVRSIICPSE--------GFIS--------------------------NAGSLKGVQHVILLSQLSVYRGSGGIQALMKG 207 (305)
Q Consensus 162 ~~d~Vi~~~~--------g~~~--------------------------~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~ 207 (305)
.+|++|++++ +.+. ...+ .+ .+||++||.....+.+....|...
T Consensus 85 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~-~~-G~Iv~isS~~~~~~~~~~~~Y~as 162 (271)
T PRK06505 85 KLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMP-DG-GSMLTLTYGGSTRVMPNYNVMGVA 162 (271)
T ss_pred CCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhc-cC-ceEEEEcCCCccccCCccchhhhh
Confidence 5799998733 1000 0011 12 589999998765544444445443
Q ss_pred HH--HHHHHHHHHHHHhCCCCEEEEecCCcccCCCCC--cc---e-eeecCCCCCCccCHHHHHHHHHHHhhCCC--CCC
Q 021928 208 NA--RKLAEQDESMLMASGIPYTIIRTGVLQNTPGGK--QG---F-QFEEGCAANGSLSKEDAAFICVEALESIP--QTG 277 (305)
Q Consensus 208 ~~--~~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~--~~---~-~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~ 277 (305)
++ ..+.+.....+...++.++.|.||++....... .. . ..........+..++|+|.+++.++.... ..+
T Consensus 163 KaAl~~l~r~la~el~~~gIrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~~~p~~r~~~peeva~~~~fL~s~~~~~itG 242 (271)
T PRK06505 163 KAALEASVRYLAADYGPQGIRVNAISAGPVRTLAGAGIGDARAIFSYQQRNSPLRRTVTIDEVGGSALYLLSDLSSGVTG 242 (271)
T ss_pred HHHHHHHHHHHHHHHhhcCeEEEEEecCCccccccccCcchHHHHHHHhhcCCccccCCHHHHHHHHHHHhCccccccCc
Confidence 32 222233333455689999999999965332110 00 0 00001112335688999999999997543 357
Q ss_pred cEEEEecCC
Q 021928 278 LIFEVVNGE 286 (305)
Q Consensus 278 ~~~~v~~g~ 286 (305)
+.+.+.+|.
T Consensus 243 ~~i~vdgG~ 251 (271)
T PRK06505 243 EIHFVDSGY 251 (271)
T ss_pred eEEeecCCc
Confidence 888887764
|
|
| >PRK12367 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.41 E-value=2.2e-11 Score=108.97 Aligned_cols=165 Identities=9% Similarity=-0.000 Sum_probs=104.3
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcch-hhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEECCcch--
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-AMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEGF-- 173 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~-~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~g~-- 173 (305)
++++++||||+|+||++++++|+++|++|+++.|++.. ...........+.+|++|.+++.+.+..+|++|++++..
T Consensus 13 ~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~iDilVnnAG~~~~ 92 (245)
T PRK12367 13 QGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSESNDESPNEWIKWECGKEESLDKQLASLDVLILNHGINPG 92 (245)
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhhhccCCCeEEEeeCCCHHHHHHhcCCCCEEEECCccCCc
Confidence 35899999999999999999999999999999998632 211111223678899999999999999999999884310
Q ss_pred ---------------------Hhh----hhhhc---CCCEEEEEcccccccCCCCcccccchHHHH--HH---HHHHHHH
Q 021928 174 ---------------------ISN----AGSLK---GVQHVILLSQLSVYRGSGGIQALMKGNARK--LA---EQDESML 220 (305)
Q Consensus 174 ---------------------~~~----~a~~~---gv~~~V~iSS~~~~~~~~~~~~~~~~~~~~--~~---~~aE~~l 220 (305)
+.. ...+. +-..++..||.+...+. ....|..++..- .. ......+
T Consensus 93 ~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~g~~iiv~ss~a~~~~~-~~~~Y~aSKaal~~~~~l~~~l~~e~ 171 (245)
T PRK12367 93 GRQDPENINKALEINALSSWRLLELFEDIALNNNSQIPKEIWVNTSEAEIQPA-LSPSYEISKRLIGQLVSLKKNLLDKN 171 (245)
T ss_pred CCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccCCCeEEEEEecccccCCC-CCchhHHHHHHHHHHHHHHHHHHHhh
Confidence 111 12221 12234444554443332 233354433321 01 1111112
Q ss_pred HhCCCCEEEEecCCcccCCCCCcceeeecCCCCCCccCHHHHHHHHHHHhhCCC
Q 021928 221 MASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIP 274 (305)
Q Consensus 221 ~~~gi~~tilRPg~l~~~~~~~~~~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~ 274 (305)
...++.++.+.||.+..... ....++.+|+|+.++.++.+..
T Consensus 172 ~~~~i~v~~~~pg~~~t~~~------------~~~~~~~~~vA~~i~~~~~~~~ 213 (245)
T PRK12367 172 ERKKLIIRKLILGPFRSELN------------PIGIMSADFVAKQILDQANLGL 213 (245)
T ss_pred cccccEEEEecCCCcccccC------------ccCCCCHHHHHHHHHHHHhcCC
Confidence 34688889999988632211 1135789999999999997654
|
|
| >PRK06197 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.41 E-value=5.2e-12 Score=116.24 Aligned_cols=101 Identities=14% Similarity=0.108 Sum_probs=76.1
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh-------c-CCCcEEeecCCCCHHHHHHHhc-----
Q 021928 95 PEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------F-GTYVESMAGDASNKKFLKTALR----- 161 (305)
Q Consensus 95 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~-------~-~~~v~~v~~D~~d~~~~~~~~~----- 161 (305)
+..+++|+||||+|+||++++++|+++|++|++++|+.++..+. . +..+.++.+|+.|.+++.++++
T Consensus 13 ~~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~ 92 (306)
T PRK06197 13 DQSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRAA 92 (306)
T ss_pred cCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhh
Confidence 34569999999999999999999999999999999987653211 1 2357899999999988877654
Q ss_pred --CccEEEECCcc-----------h-----------------HhhhhhhcCCCEEEEEcccccc
Q 021928 162 --GVRSIICPSEG-----------F-----------------ISNAGSLKGVQHVILLSQLSVY 195 (305)
Q Consensus 162 --~~d~Vi~~~~g-----------~-----------------~~~~a~~~gv~~~V~iSS~~~~ 195 (305)
.+|+|||+++. . +...+++.+.++||++||...+
T Consensus 93 ~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~ 156 (306)
T PRK06197 93 YPRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVPGSRVVTVSSGGHR 156 (306)
T ss_pred CCCCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEECCHHHh
Confidence 57999988431 0 1222344556799999998643
|
|
| >PRK06953 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.40 E-value=3.2e-11 Score=105.71 Aligned_cols=171 Identities=13% Similarity=0.092 Sum_probs=110.9
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHh---c--CccEEEECCcc
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTAL---R--GVRSIICPSEG 172 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~---~--~~d~Vi~~~~g 172 (305)
|++++||||+|+||++++++|+++|++|+++.|++++..+....+++++.+|++|.+++.+++ . .+|.+||+++.
T Consensus 1 ~~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~d~vi~~ag~ 80 (222)
T PRK06953 1 MKTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAALQALGAEALALDVADPASVAGLAWKLDGEALDAAVYVAGV 80 (222)
T ss_pred CceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHHhccceEEEecCCCHHHHHHHHHHhcCCCCCEEEECCCc
Confidence 478999999999999999999999999999999976654433345788999999998887754 3 37999987321
Q ss_pred h----------------------------Hhhhhh---hcCCCEEEEEcccccccCCCCcc---cccchHHHHHHHHHHH
Q 021928 173 F----------------------------ISNAGS---LKGVQHVILLSQLSVYRGSGGIQ---ALMKGNARKLAEQDES 218 (305)
Q Consensus 173 ~----------------------------~~~~a~---~~gv~~~V~iSS~~~~~~~~~~~---~~~~~~~~~~~~~aE~ 218 (305)
. +..++. +..-.++|++||.....+..... .|...+. ..+.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~Y~~sK~-----a~~~ 155 (222)
T PRK06953 81 YGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAAGGVLAVLSSRMGSIGDATGTTGWLYRASKA-----ALND 155 (222)
T ss_pred ccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhccCCeEEEEcCcccccccccCCCccccHHhHH-----HHHH
Confidence 0 001111 11234789998865433321111 2333221 2222
Q ss_pred HHH-----hCCCCEEEEecCCcccCCCCCcceeeecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEEEEec
Q 021928 219 MLM-----ASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVN 284 (305)
Q Consensus 219 ~l~-----~~gi~~tilRPg~l~~~~~~~~~~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~v~~ 284 (305)
+++ ..++.++.++||++....... ...++.++.+..+..++.... ..+..|...+
T Consensus 156 ~~~~~~~~~~~i~v~~v~Pg~i~t~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (222)
T PRK06953 156 ALRAASLQARHATCIALHPGWVRTDMGGA-----------QAALDPAQSVAGMRRVIAQATRRDNGRFFQYDG 217 (222)
T ss_pred HHHHHhhhccCcEEEEECCCeeecCCCCC-----------CCCCCHHHHHHHHHHHHHhcCcccCceEEeeCC
Confidence 222 247889999999975442211 235788999999998876433 3455555443
|
|
| >PRK07533 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.39 E-value=2.3e-11 Score=109.37 Aligned_cols=188 Identities=10% Similarity=-0.004 Sum_probs=117.3
Q ss_pred CCCEEEEEcCC--ChHHHHHHHHHHhCCCeEEEEEcCcch---hhhhc--CCCcEEeecCCCCHHHHHHHh-------cC
Q 021928 97 ARDAVLVTDGD--SDIGQMVILSLIVKRTRIKALVKDKRN---AMESF--GTYVESMAGDASNKKFLKTAL-------RG 162 (305)
Q Consensus 97 ~~~~vlVtGat--G~iG~~l~~~L~~~g~~V~~~~R~~~~---~~~~~--~~~v~~v~~D~~d~~~~~~~~-------~~ 162 (305)
.+|+++||||+ ++||++++++|+++|++|+++.|+.+. ..+.. ...+.++.+|++|.+++.+++ ..
T Consensus 9 ~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 88 (258)
T PRK07533 9 AGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAEEWGR 88 (258)
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHHHcCC
Confidence 45899999998 599999999999999999999987532 11111 123567899999988877655 34
Q ss_pred ccEEEECCcc--------h----------------------Hh----hhhhhcCCCEEEEEcccccccCCCCcccccchH
Q 021928 163 VRSIICPSEG--------F----------------------IS----NAGSLKGVQHVILLSQLSVYRGSGGIQALMKGN 208 (305)
Q Consensus 163 ~d~Vi~~~~g--------~----------------------~~----~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~ 208 (305)
+|++|++++- . +. ...++ -.++|++||.....+......|..++
T Consensus 89 ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~--~g~Ii~iss~~~~~~~~~~~~Y~asK 166 (258)
T PRK07533 89 LDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTN--GGSLLTMSYYGAEKVVENYNLMGPVK 166 (258)
T ss_pred CCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhcc--CCEEEEEeccccccCCccchhhHHHH
Confidence 6999987321 0 00 01111 25899999987655443333443332
Q ss_pred H--HHHHHHHHHHHHhCCCCEEEEecCCcccCCCCC----cce--eeecCCCCCCccCHHHHHHHHHHHhhCCC--CCCc
Q 021928 209 A--RKLAEQDESMLMASGIPYTIIRTGVLQNTPGGK----QGF--QFEEGCAANGSLSKEDAAFICVEALESIP--QTGL 278 (305)
Q Consensus 209 ~--~~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~----~~~--~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~ 278 (305)
+ ..+.+.....+...++.+..|.||++....... ... .+...........++|+|.+++.++.+.. ..|+
T Consensus 167 aal~~l~~~la~el~~~gI~Vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~~~~L~s~~~~~itG~ 246 (258)
T PRK07533 167 AALESSVRYLAAELGPKGIRVHAISPGPLKTRAASGIDDFDALLEDAAERAPLRRLVDIDDVGAVAAFLASDAARRLTGN 246 (258)
T ss_pred HHHHHHHHHHHHHhhhcCcEEEEEecCCcCChhhhccCCcHHHHHHHHhcCCcCCCCCHHHHHHHHHHHhChhhccccCc
Confidence 2 112222223345679999999999964322110 000 00011112346788999999999997533 4678
Q ss_pred EEEEecCC
Q 021928 279 IFEVVNGE 286 (305)
Q Consensus 279 ~~~v~~g~ 286 (305)
.+.+.+|.
T Consensus 247 ~i~vdgg~ 254 (258)
T PRK07533 247 TLYIDGGY 254 (258)
T ss_pred EEeeCCcc
Confidence 88777653
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.39 E-value=1.6e-11 Score=120.97 Aligned_cols=188 Identities=14% Similarity=0.096 Sum_probs=120.1
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh---hcCCCcEEeecCCCCHHHHHHHhc-------CccEE
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALR-------GVRSI 166 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~---~~~~~v~~v~~D~~d~~~~~~~~~-------~~d~V 166 (305)
.+++++||||+++||++++++|+++|++|+++.|+.+...+ ..+.++.++.+|++|.+++.++++ .+|++
T Consensus 4 ~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~l 83 (520)
T PRK06484 4 QSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSLGPDHHALAMDVSDEAQIREGFEQLHREFGRIDVL 83 (520)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEeccCCHHHHHHHHHHHHHHhCCCCEE
Confidence 45899999999999999999999999999999998765432 234467789999999888776654 47999
Q ss_pred EECCcc------h----------------------Hh----hhhhhcCCC-EEEEEcccccccCCCCcccccchHH--HH
Q 021928 167 ICPSEG------F----------------------IS----NAGSLKGVQ-HVILLSQLSVYRGSGGIQALMKGNA--RK 211 (305)
Q Consensus 167 i~~~~g------~----------------------~~----~~a~~~gv~-~~V~iSS~~~~~~~~~~~~~~~~~~--~~ 211 (305)
|++++. . +. ...++.+-. +||++||.....+......|...+. ..
T Consensus 84 i~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~~~~~~~~~Y~asKaal~~ 163 (520)
T PRK06484 84 VNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGLVALPKRTAYSASKAAVIS 163 (520)
T ss_pred EECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccCCCCCCCchHHHHHHHHHH
Confidence 987431 0 00 112223333 8999999877766555555554332 11
Q ss_pred HHHHHHHHHHhCCCCEEEEecCCcccCCCC---Cc-cee---eecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEEEE
Q 021928 212 LAEQDESMLMASGIPYTIIRTGVLQNTPGG---KQ-GFQ---FEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEV 282 (305)
Q Consensus 212 ~~~~aE~~l~~~gi~~tilRPg~l~~~~~~---~~-~~~---~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~v 282 (305)
+.+.....+...+++++.|+||.+...... .. ... ...........+.+|+|+++..++..+. ..++.+.+
T Consensus 164 l~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~v~~l~~~~~~~~~G~~~~~ 243 (520)
T PRK06484 164 LTRSLACEWAAKGIRVNAVLPGYVRTQMVAELERAGKLDPSAVRSRIPLGRLGRPEEIAEAVFFLASDQASYITGSTLVV 243 (520)
T ss_pred HHHHHHHHhhhhCeEEEEEccCCcCchhhhhhcccchhhhHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccCceEEe
Confidence 222222334567899999999986432110 00 000 0000111234688999999999887533 34555555
Q ss_pred ec
Q 021928 283 VN 284 (305)
Q Consensus 283 ~~ 284 (305)
.+
T Consensus 244 ~g 245 (520)
T PRK06484 244 DG 245 (520)
T ss_pred cC
Confidence 44
|
|
| >PRK06603 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.37 E-value=2.6e-11 Score=109.15 Aligned_cols=187 Identities=11% Similarity=-0.008 Sum_probs=117.0
Q ss_pred CCCEEEEEcCCC--hHHHHHHHHHHhCCCeEEEEEcCcch---hhhhcC--CCcEEeecCCCCHHHHHHHhc-------C
Q 021928 97 ARDAVLVTDGDS--DIGQMVILSLIVKRTRIKALVKDKRN---AMESFG--TYVESMAGDASNKKFLKTALR-------G 162 (305)
Q Consensus 97 ~~~~vlVtGatG--~iG~~l~~~L~~~g~~V~~~~R~~~~---~~~~~~--~~v~~v~~D~~d~~~~~~~~~-------~ 162 (305)
.+|+++||||++ +||++++++|+++|++|++..|+... ..+... ....++.+|++|.+++.++++ .
T Consensus 7 ~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 86 (260)
T PRK06603 7 QGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKEKWGS 86 (260)
T ss_pred CCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCchHHHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 358999999997 89999999999999999998887421 111111 123457899999988876663 4
Q ss_pred ccEEEECCcc--------hH----------------------h----hhhhhcCCCEEEEEcccccccCCCCcccccchH
Q 021928 163 VRSIICPSEG--------FI----------------------S----NAGSLKGVQHVILLSQLSVYRGSGGIQALMKGN 208 (305)
Q Consensus 163 ~d~Vi~~~~g--------~~----------------------~----~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~ 208 (305)
+|++|++++. .+ . ...++ -.+||++||.....+.+....|..++
T Consensus 87 iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~--~G~Iv~isS~~~~~~~~~~~~Y~asK 164 (260)
T PRK06603 87 FDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHD--GGSIVTLTYYGAEKVIPNYNVMGVAK 164 (260)
T ss_pred ccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhcc--CceEEEEecCccccCCCcccchhhHH
Confidence 7999987321 00 0 01111 25899999987765444444554433
Q ss_pred H--HHHHHHHHHHHHhCCCCEEEEecCCcccCCCC---C-cce--eeecCCCCCCccCHHHHHHHHHHHhhCCC--CCCc
Q 021928 209 A--RKLAEQDESMLMASGIPYTIIRTGVLQNTPGG---K-QGF--QFEEGCAANGSLSKEDAAFICVEALESIP--QTGL 278 (305)
Q Consensus 209 ~--~~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~---~-~~~--~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~ 278 (305)
+ ..+.+.....+...++.+..|.||++...... . ... ..........+..++|+|++++.++.... ..++
T Consensus 165 aal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~~~~L~s~~~~~itG~ 244 (260)
T PRK06603 165 AALEASVKYLANDMGENNIRVNAISAGPIKTLASSAIGDFSTMLKSHAATAPLKRNTTQEDVGGAAVYLFSELSKGVTGE 244 (260)
T ss_pred HHHHHHHHHHHHHhhhcCeEEEEEecCcCcchhhhcCCCcHHHHHHHHhcCCcCCCCCHHHHHHHHHHHhCcccccCcce
Confidence 2 12222233345568999999999996432110 0 000 00001112335689999999999997543 3578
Q ss_pred EEEEecC
Q 021928 279 IFEVVNG 285 (305)
Q Consensus 279 ~~~v~~g 285 (305)
.+.+.+|
T Consensus 245 ~i~vdgG 251 (260)
T PRK06603 245 IHYVDCG 251 (260)
T ss_pred EEEeCCc
Confidence 8888766
|
|
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=99.37 E-value=2.3e-11 Score=123.69 Aligned_cols=182 Identities=10% Similarity=0.077 Sum_probs=116.9
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhc--CccEEEECCc--
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--GVRSIICPSE-- 171 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~--~~d~Vi~~~~-- 171 (305)
.+.|+||||||+||||++|+++|.++|++|.. ..+|++|.+.+...+. +.|+|||+++
T Consensus 378 ~~~mkiLVtGa~G~iG~~l~~~L~~~g~~v~~------------------~~~~l~d~~~v~~~i~~~~pd~Vih~Aa~~ 439 (668)
T PLN02260 378 KPSLKFLIYGRTGWIGGLLGKLCEKQGIAYEY------------------GKGRLEDRSSLLADIRNVKPTHVFNAAGVT 439 (668)
T ss_pred CCCceEEEECCCchHHHHHHHHHHhCCCeEEe------------------eccccccHHHHHHHHHhhCCCEEEECCccc
Confidence 45689999999999999999999999998731 1246778888888776 6799999832
Q ss_pred ---c--------------------hHhhhhhhcCCCEEEEEcccccccCC-------C-C------cccccchHHHHHHH
Q 021928 172 ---G--------------------FISNAGSLKGVQHVILLSQLSVYRGS-------G-G------IQALMKGNARKLAE 214 (305)
Q Consensus 172 ---g--------------------~~~~~a~~~gv~~~V~iSS~~~~~~~-------~-~------~~~~~~~~~~~~~~ 214 (305)
. .+.++|++.+++ +|++||..++... . + +.+. ...+...|.
T Consensus 440 ~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~g~~-~v~~Ss~~v~~~~~~~~~~~~~p~~E~~~~~~~-~~~Yg~sK~ 517 (668)
T PLN02260 440 GRPNVDWCESHKVETIRANVVGTLTLADVCRENGLL-MMNFATGCIFEYDAKHPEGSGIGFKEEDKPNFT-GSFYSKTKA 517 (668)
T ss_pred CCCCCChHHhCHHHHHHHHhHHHHHHHHHHHHcCCe-EEEEcccceecCCcccccccCCCCCcCCCCCCC-CChhhHHHH
Confidence 0 044567788886 5667776654310 0 0 1011 011233466
Q ss_pred HHHHHHHhCCCCEEEEecCCccc-CCCCCccee-----eec-CCCCCCccCHHHHHHHHHHHhhCCCCCCcEEEEecCC-
Q 021928 215 QDESMLMASGIPYTIIRTGVLQN-TPGGKQGFQ-----FEE-GCAANGSLSKEDAAFICVEALESIPQTGLIFEVVNGE- 286 (305)
Q Consensus 215 ~aE~~l~~~gi~~tilRPg~l~~-~~~~~~~~~-----~~~-~~~~~~~Is~~DvA~~iv~~l~~~~~~~~~~~v~~g~- 286 (305)
.+|.+++.. -++.++|+.++.. .......+. ... -....+...++|++.+++.+++.. .+.+||++++.
T Consensus 518 ~~E~~~~~~-~~~~~~r~~~~~~~~~~~~~nfv~~~~~~~~~~~vp~~~~~~~~~~~~~~~l~~~~--~~giyni~~~~~ 594 (668)
T PLN02260 518 MVEELLREY-DNVCTLRVRMPISSDLSNPRNFITKISRYNKVVNIPNSMTVLDELLPISIEMAKRN--LRGIWNFTNPGV 594 (668)
T ss_pred HHHHHHHhh-hhheEEEEEEecccCCCCccHHHHHHhccceeeccCCCceehhhHHHHHHHHHHhC--CCceEEecCCCc
Confidence 778888765 3566777777442 211110000 000 011235677788888888888642 25799999866
Q ss_pred cCHHHHHHHHHHhh
Q 021928 287 EKVSDWKKCFSRLM 300 (305)
Q Consensus 287 ~s~~d~~~~~~~l~ 300 (305)
.++.|+++.+.+..
T Consensus 595 ~s~~e~a~~i~~~~ 608 (668)
T PLN02260 595 VSHNEILEMYKDYI 608 (668)
T ss_pred CcHHHHHHHHHHhc
Confidence 69999999988865
|
|
| >TIGR02685 pter_reduc_Leis pteridine reductase | Back alignment and domain information |
|---|
Probab=99.36 E-value=2.8e-11 Score=109.09 Aligned_cols=188 Identities=14% Similarity=0.104 Sum_probs=113.4
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCc-chhh---hhc----CCCcEEeecCCCCHHHH----HHH-------
Q 021928 99 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK-RNAM---ESF----GTYVESMAGDASNKKFL----KTA------- 159 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~-~~~~---~~~----~~~v~~v~~D~~d~~~~----~~~------- 159 (305)
++++||||+|+||++++++|+++|++|+++.|+. +... +.+ +..+.++.+|++|.+++ .++
T Consensus 2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~~ 81 (267)
T TIGR02685 2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFRA 81 (267)
T ss_pred CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHHc
Confidence 5899999999999999999999999999987653 3321 111 23466789999997644 322
Q ss_pred hcCccEEEECCcch-----------------------Hh--------------hh----hhhc------CCCEEEEEccc
Q 021928 160 LRGVRSIICPSEGF-----------------------IS--------------NA----GSLK------GVQHVILLSQL 192 (305)
Q Consensus 160 ~~~~d~Vi~~~~g~-----------------------~~--------------~~----a~~~------gv~~~V~iSS~ 192 (305)
+.++|+|||+++.. +. .+ .+.. ...++|.+||.
T Consensus 82 ~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~~s~ 161 (267)
T TIGR02685 82 FGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLCDA 161 (267)
T ss_pred cCCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEEEehhh
Confidence 24689999884310 00 00 1111 12468888887
Q ss_pred ccccCCCCcccccchHH--HHHHHHHHHHHHhCCCCEEEEecCCcccCCCCCcc--eeeecCCCC-CCccCHHHHHHHHH
Q 021928 193 SVYRGSGGIQALMKGNA--RKLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQG--FQFEEGCAA-NGSLSKEDAAFICV 267 (305)
Q Consensus 193 ~~~~~~~~~~~~~~~~~--~~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~~~--~~~~~~~~~-~~~Is~~DvA~~iv 267 (305)
....+......|..++. ..+.+.....+...+++++.|+||++......... ..+...... ....+.+|+|++++
T Consensus 162 ~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~ 241 (267)
T TIGR02685 162 MTDQPLLGFTMYTMAKHALEGLTRSAALELAPLQIRVNGVAPGLSLLPDAMPFEVQEDYRRKVPLGQREASAEQIADVVI 241 (267)
T ss_pred hccCCCcccchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCccCccccchhHHHHHHHhCCCCcCCCCHHHHHHHHH
Confidence 66555444445544332 11222222224457999999999986311110000 001011111 23578999999999
Q ss_pred HHhhCCC--CCCcEEEEecCC
Q 021928 268 EALESIP--QTGLIFEVVNGE 286 (305)
Q Consensus 268 ~~l~~~~--~~~~~~~v~~g~ 286 (305)
.++..+. ..++.+.+.+|.
T Consensus 242 ~l~~~~~~~~~G~~~~v~gg~ 262 (267)
T TIGR02685 242 FLVSPKAKYITGTCIKVDGGL 262 (267)
T ss_pred HHhCcccCCcccceEEECCce
Confidence 9997643 367888887653
|
Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family. |
| >PRK07453 protochlorophyllide oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=99.36 E-value=9.6e-12 Score=115.36 Aligned_cols=74 Identities=12% Similarity=0.231 Sum_probs=61.4
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh---c---CCCcEEeecCCCCHHHHHHHhc-------Cc
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---F---GTYVESMAGDASNKKFLKTALR-------GV 163 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~---~~~v~~v~~D~~d~~~~~~~~~-------~~ 163 (305)
++++|+||||+|+||++++++|+++|++|++++|+.++..+. . +..+.++.+|++|.+++.++++ .+
T Consensus 5 ~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i 84 (322)
T PRK07453 5 AKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALGKPL 84 (322)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhCCCc
Confidence 468999999999999999999999999999999987653221 1 2358899999999998887765 38
Q ss_pred cEEEECC
Q 021928 164 RSIICPS 170 (305)
Q Consensus 164 d~Vi~~~ 170 (305)
|++|+++
T Consensus 85 D~li~nA 91 (322)
T PRK07453 85 DALVCNA 91 (322)
T ss_pred cEEEECC
Confidence 9999874
|
|
| >PRK08177 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.36 E-value=8.6e-11 Score=103.17 Aligned_cols=166 Identities=14% Similarity=0.106 Sum_probs=104.6
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhc-CCCcEEeecCCCCHHHHHHHhc-----CccEEEECCc
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF-GTYVESMAGDASNKKFLKTALR-----GVRSIICPSE 171 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-~~~v~~v~~D~~d~~~~~~~~~-----~~d~Vi~~~~ 171 (305)
+++|+||||+|+||++++++|+++|++|++++|+++...+.. ..++.++.+|++|.+++.++++ ++|+|||+++
T Consensus 1 ~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~id~vi~~ag 80 (225)
T PRK08177 1 KRTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQALPGVHIEKLDMNDPASLDQLLQRLQGQRFDLLFVNAG 80 (225)
T ss_pred CCEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHHhccccceEEcCCCCHHHHHHHHHHhhcCCCCEEEEcCc
Confidence 478999999999999999999999999999999976543221 1357888999999888877665 4799998732
Q ss_pred ch----------------------------Hhhhhh---hcCCCEEEEEcccccccCC---CCcccccchHHH--HHHHH
Q 021928 172 GF----------------------------ISNAGS---LKGVQHVILLSQLSVYRGS---GGIQALMKGNAR--KLAEQ 215 (305)
Q Consensus 172 g~----------------------------~~~~a~---~~gv~~~V~iSS~~~~~~~---~~~~~~~~~~~~--~~~~~ 215 (305)
.. +...+. +.+..+++++||.....+. .....|...+.. .+.+.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~ss~~g~~~~~~~~~~~~Y~~sK~a~~~~~~~ 160 (225)
T PRK08177 81 ISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPGQGVLAFMSSQLGSVELPDGGEMPLYKASKAALNSMTRS 160 (225)
T ss_pred ccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhcCCEEEEEccCccccccCCCCCccchHHHHHHHHHHHHH
Confidence 10 011111 1233578888886443221 122233332211 11111
Q ss_pred HHHHHHhCCCCEEEEecCCcccCCCCCcceeeecCCCCCCccCHHHHHHHHHHHhhCCC
Q 021928 216 DESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIP 274 (305)
Q Consensus 216 aE~~l~~~gi~~tilRPg~l~~~~~~~~~~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~ 274 (305)
....+...++.++.++||++....... ...++.+..++.++..+++..
T Consensus 161 l~~e~~~~~i~v~~i~PG~i~t~~~~~-----------~~~~~~~~~~~~~~~~~~~~~ 208 (225)
T PRK08177 161 FVAELGEPTLTVLSMHPGWVKTDMGGD-----------NAPLDVETSVKGLVEQIEAAS 208 (225)
T ss_pred HHHHhhcCCeEEEEEcCCceecCCCCC-----------CCCCCHHHHHHHHHHHHHhCC
Confidence 222233478999999999975432210 123667777777777776554
|
|
| >KOG4288 consensus Predicted oxidoreductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.35 E-value=3.4e-12 Score=110.14 Aligned_cols=174 Identities=18% Similarity=0.148 Sum_probs=127.0
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcch-hhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEECCcch---
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-AMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEGF--- 173 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~-~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~g~--- 173 (305)
..++++.|++|+.|+++|+...+.++.|..+.|+..+ ..+.+..++.|+.+|.....-+...+.+...++.+.+++
T Consensus 52 ~e~tlvlggnpfsgs~vlk~A~~vv~svgilsen~~k~~l~sw~~~vswh~gnsfssn~~k~~l~g~t~v~e~~ggfgn~ 131 (283)
T KOG4288|consen 52 VEWTLVLGGNPFSGSEVLKNATNVVHSVGILSENENKQTLSSWPTYVSWHRGNSFSSNPNKLKLSGPTFVYEMMGGFGNI 131 (283)
T ss_pred HHHHhhhcCCCcchHHHHHHHHhhceeeeEeecccCcchhhCCCcccchhhccccccCcchhhhcCCcccHHHhcCccch
Confidence 4789999999999999999999999999999999765 445566789999999987666677788887777553322
Q ss_pred -------------HhhhhhhcCCCEEEEEcccccccCCCCcccccchHHHHHHHHHHHHHH-hCCCCEEEEecCCcccCC
Q 021928 174 -------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLM-ASGIPYTIIRTGVLQNTP 239 (305)
Q Consensus 174 -------------~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~~~~~~aE~~l~-~~gi~~tilRPg~l~~~~ 239 (305)
...++.++||++|||+|.....-++..+..|.. -|+++|..|. ..+..-++||||++++..
T Consensus 132 ~~m~~ing~ani~a~kaa~~~gv~~fvyISa~d~~~~~~i~rGY~~-----gKR~AE~Ell~~~~~rgiilRPGFiyg~R 206 (283)
T KOG4288|consen 132 ILMDRINGTANINAVKAAAKAGVPRFVYISAHDFGLPPLIPRGYIE-----GKREAEAELLKKFRFRGIILRPGFIYGTR 206 (283)
T ss_pred HHHHHhccHhhHHHHHHHHHcCCceEEEEEhhhcCCCCccchhhhc-----cchHHHHHHHHhcCCCceeeccceeeccc
Confidence 234677899999999997654334333444544 3667776554 578999999999987653
Q ss_pred CCCc-----------------ce-----ee-ecCCCCCCccCHHHHHHHHHHHhhCCCCC
Q 021928 240 GGKQ-----------------GF-----QF-EEGCAANGSLSKEDAAFICVEALESIPQT 276 (305)
Q Consensus 240 ~~~~-----------------~~-----~~-~~~~~~~~~Is~~DvA~~iv~~l~~~~~~ 276 (305)
..+. .. .+ -.++.....+.+++||.+.++++.+|...
T Consensus 207 ~v~g~~~pL~~vg~pl~~~~~~a~k~~~kLp~lg~l~~ppvnve~VA~aal~ai~dp~f~ 266 (283)
T KOG4288|consen 207 NVGGIKSPLHTVGEPLEMVLKFALKPLNKLPLLGPLLAPPVNVESVALAALKAIEDPDFK 266 (283)
T ss_pred ccCcccccHHhhhhhHHHHHHhhhchhhcCcccccccCCCcCHHHHHHHHHHhccCCCcC
Confidence 2100 00 00 02233356789999999999999998765
|
|
| >PRK08159 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.35 E-value=3.3e-11 Score=109.31 Aligned_cols=189 Identities=9% Similarity=0.040 Sum_probs=117.8
Q ss_pred CCEEEEEcCC--ChHHHHHHHHHHhCCCeEEEEEcCcc---hhhhhcC--CCcEEeecCCCCHHHHHHHhc-------Cc
Q 021928 98 RDAVLVTDGD--SDIGQMVILSLIVKRTRIKALVKDKR---NAMESFG--TYVESMAGDASNKKFLKTALR-------GV 163 (305)
Q Consensus 98 ~~~vlVtGat--G~iG~~l~~~L~~~g~~V~~~~R~~~---~~~~~~~--~~v~~v~~D~~d~~~~~~~~~-------~~ 163 (305)
+++++||||+ ++||++++++|+++|++|++..|+.. ...+... ....++++|++|.++++++++ .+
T Consensus 10 ~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i 89 (272)
T PRK08159 10 GKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKKWGKL 89 (272)
T ss_pred CCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHhcCCC
Confidence 4899999997 89999999999999999998887632 1111111 235678999999888876653 46
Q ss_pred cEEEECCcc--------h----------------------Hhhhh-hh-cCCCEEEEEcccccccCCCCcccccchHH--
Q 021928 164 RSIICPSEG--------F----------------------ISNAG-SL-KGVQHVILLSQLSVYRGSGGIQALMKGNA-- 209 (305)
Q Consensus 164 d~Vi~~~~g--------~----------------------~~~~a-~~-~gv~~~V~iSS~~~~~~~~~~~~~~~~~~-- 209 (305)
|++|++++. . +...+ .. .+-.++|++||.+...+.+....|..+++
T Consensus 90 D~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~~~p~~~~Y~asKaal 169 (272)
T PRK08159 90 DFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTDGGSILTLTYYGAEKVMPHYNVMGVAKAAL 169 (272)
T ss_pred cEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCCCceEEEEeccccccCCCcchhhhhHHHHH
Confidence 999987321 0 00001 00 12268999998876654444444444332
Q ss_pred HHHHHHHHHHHHhCCCCEEEEecCCcccCCCC-Ccce--e--ee-cCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEEE
Q 021928 210 RKLAEQDESMLMASGIPYTIIRTGVLQNTPGG-KQGF--Q--FE-EGCAANGSLSKEDAAFICVEALESIP--QTGLIFE 281 (305)
Q Consensus 210 ~~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~-~~~~--~--~~-~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~ 281 (305)
..+.+.....+...++.+..|.||++...... .... . .. ..........++|+|++++.++.... ..++++.
T Consensus 170 ~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~~~~L~s~~~~~itG~~i~ 249 (272)
T PRK08159 170 EASVKYLAVDLGPKNIRVNAISAGPIKTLAASGIGDFRYILKWNEYNAPLRRTVTIEEVGDSALYLLSDLSRGVTGEVHH 249 (272)
T ss_pred HHHHHHHHHHhcccCeEEEEeecCCcCCHHHhcCCcchHHHHHHHhCCcccccCCHHHHHHHHHHHhCccccCccceEEE
Confidence 12222223334568899999999996432110 0000 0 00 01112335688999999999997543 3678888
Q ss_pred EecCC
Q 021928 282 VVNGE 286 (305)
Q Consensus 282 v~~g~ 286 (305)
+.+|.
T Consensus 250 vdgG~ 254 (272)
T PRK08159 250 VDSGY 254 (272)
T ss_pred ECCCc
Confidence 88774
|
|
| >PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.35 E-value=3.6e-11 Score=116.68 Aligned_cols=189 Identities=15% Similarity=0.086 Sum_probs=118.2
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcch--hhhhc-CCCcEEeecCCCCHHHHHHHhc-------CccEE
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN--AMESF-GTYVESMAGDASNKKFLKTALR-------GVRSI 166 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~--~~~~~-~~~v~~v~~D~~d~~~~~~~~~-------~~d~V 166 (305)
++++++||||+|+||++++++|+++|++|+++.|.... ..+.. ..+..++.+|++|.+++.++++ ++|.|
T Consensus 209 ~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~v 288 (450)
T PRK08261 209 AGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRVGGTALALDITAPDAPARIAEHLAERHGGLDIV 288 (450)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhCCCCCEE
Confidence 46899999999999999999999999999999885322 11111 1235688999999888776654 57999
Q ss_pred EECCcch--------------------------Hhhhhhh----cCCCEEEEEcccccccCCCCcccccchHH--HHHHH
Q 021928 167 ICPSEGF--------------------------ISNAGSL----KGVQHVILLSQLSVYRGSGGIQALMKGNA--RKLAE 214 (305)
Q Consensus 167 i~~~~g~--------------------------~~~~a~~----~gv~~~V~iSS~~~~~~~~~~~~~~~~~~--~~~~~ 214 (305)
||+++.. +.+++.. ..-.+||++||.....+..+...|...+. ..+.+
T Consensus 289 i~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~~~~g~~~~~~Y~asKaal~~~~~ 368 (450)
T PRK08261 289 VHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSISGIAGNRGQTNYAASKAGVIGLVQ 368 (450)
T ss_pred EECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCCCChHHHHHHHHHHHHHH
Confidence 9984310 1111111 12368999999877655444444543332 11222
Q ss_pred HHHHHHHhCCCCEEEEecCCcccCCCCCcceeee----cCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEEEEecC
Q 021928 215 QDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFE----EGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVNG 285 (305)
Q Consensus 215 ~aE~~l~~~gi~~tilRPg~l~~~~~~~~~~~~~----~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~v~~g 285 (305)
.....+...++.++.+.||.+............. .-......-..+|+|+++..++.... ..++++.+.++
T Consensus 369 ~la~el~~~gi~v~~v~PG~i~t~~~~~~~~~~~~~~~~~~~l~~~~~p~dva~~~~~l~s~~~~~itG~~i~v~g~ 445 (450)
T PRK08261 369 ALAPLLAERGITINAVAPGFIETQMTAAIPFATREAGRRMNSLQQGGLPVDVAETIAWLASPASGGVTGNVVRVCGQ 445 (450)
T ss_pred HHHHHHhhhCcEEEEEEeCcCcchhhhccchhHHHHHhhcCCcCCCCCHHHHHHHHHHHhChhhcCCCCCEEEECCC
Confidence 2223345679999999999964322111000000 00111223467999999999986433 35788888754
|
|
| >TIGR01500 sepiapter_red sepiapterin reductase | Back alignment and domain information |
|---|
Probab=99.35 E-value=1.4e-11 Score=110.44 Aligned_cols=174 Identities=16% Similarity=0.083 Sum_probs=108.9
Q ss_pred EEEEEcCCChHHHHHHHHHHh----CCCeEEEEEcCcchhhhh---c-----CCCcEEeecCCCCHHHHHHHhcCc----
Q 021928 100 AVLVTDGDSDIGQMVILSLIV----KRTRIKALVKDKRNAMES---F-----GTYVESMAGDASNKKFLKTALRGV---- 163 (305)
Q Consensus 100 ~vlVtGatG~iG~~l~~~L~~----~g~~V~~~~R~~~~~~~~---~-----~~~v~~v~~D~~d~~~~~~~~~~~---- 163 (305)
.++||||+++||.+++++|++ .|++|+++.|+++...+. + +..+.++.+|++|.++++++++.+
T Consensus 2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~ 81 (256)
T TIGR01500 2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKALRELP 81 (256)
T ss_pred EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHhcc
Confidence 689999999999999999997 799999999987653221 1 235788999999998887766422
Q ss_pred -------cEEEECCcc-----h-H---------------------------hhhhhhc-C-CCEEEEEcccccccCCCCc
Q 021928 164 -------RSIICPSEG-----F-I---------------------------SNAGSLK-G-VQHVILLSQLSVYRGSGGI 201 (305)
Q Consensus 164 -------d~Vi~~~~g-----~-~---------------------------~~~a~~~-g-v~~~V~iSS~~~~~~~~~~ 201 (305)
|++|++++. . . ....++. + -.+||++||.....+.+..
T Consensus 82 g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~~~~~~~~~ 161 (256)
T TIGR01500 82 RPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAIQPFKGW 161 (256)
T ss_pred ccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHHhCCCCCCc
Confidence 467776321 0 0 0011222 2 3589999998876655555
Q ss_pred ccccchHHH--HHHHHHHHHHHhCCCCEEEEecCCcccCCCCC------ccee---eecCCCCCCccCHHHHHHHHHHHh
Q 021928 202 QALMKGNAR--KLAEQDESMLMASGIPYTIIRTGVLQNTPGGK------QGFQ---FEEGCAANGSLSKEDAAFICVEAL 270 (305)
Q Consensus 202 ~~~~~~~~~--~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~------~~~~---~~~~~~~~~~Is~~DvA~~iv~~l 270 (305)
..|..++.. .+.+.....+...++.++.+.||++....... .... +........+.+++|+|..++.++
T Consensus 162 ~~Y~asKaal~~l~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~eva~~~~~l~ 241 (256)
T TIGR01500 162 ALYCAGKAARDMLFQVLALEEKNPNVRVLNYAPGVLDTDMQQQVREESVDPDMRKGLQELKAKGKLVDPKVSAQKLLSLL 241 (256)
T ss_pred hHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCcccchHHHHHHHhcCChhHHHHHHHHHhcCCCCCHHHHHHHHHHHH
Confidence 555443321 11122222234578999999999975332110 0000 000001123678999999999999
Q ss_pred hCC
Q 021928 271 ESI 273 (305)
Q Consensus 271 ~~~ 273 (305)
++.
T Consensus 242 ~~~ 244 (256)
T TIGR01500 242 EKD 244 (256)
T ss_pred hcC
Confidence 643
|
This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs. |
| >KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.33 E-value=1.2e-11 Score=102.85 Aligned_cols=136 Identities=18% Similarity=0.210 Sum_probs=104.7
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCC--CeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEECCc-
Q 021928 95 PEARDAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE- 171 (305)
Q Consensus 95 ~~~~~~vlVtGatG~iG~~l~~~L~~~g--~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~- 171 (305)
...+|.++|.||||-+|+.+++++++++ -+|+++.|.+.- .......+..+..|....+++...+++.|+.||+.+
T Consensus 15 ~mq~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~-d~at~k~v~q~~vDf~Kl~~~a~~~qg~dV~FcaLgT 93 (238)
T KOG4039|consen 15 RMQNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELP-DPATDKVVAQVEVDFSKLSQLATNEQGPDVLFCALGT 93 (238)
T ss_pred hhhccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCC-CccccceeeeEEechHHHHHHHhhhcCCceEEEeecc
Confidence 3457999999999999999999999998 389999998521 112234577778898888889999999999999822
Q ss_pred --------ch----------HhhhhhhcCCCEEEEEcccccccCCCCcccccchHHHHHHHHHHHHHHhCCCC-EEEEec
Q 021928 172 --------GF----------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMASGIP-YTIIRT 232 (305)
Q Consensus 172 --------g~----------~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~~~~~~aE~~l~~~gi~-~tilRP 232 (305)
++ .+.++++.|+++||++||.+++..+.-. |.. .+-+.|.-+.+-+++ ++|+||
T Consensus 94 TRgkaGadgfykvDhDyvl~~A~~AKe~Gck~fvLvSS~GAd~sSrFl--Y~k-----~KGEvE~~v~eL~F~~~~i~RP 166 (238)
T KOG4039|consen 94 TRGKAGADGFYKVDHDYVLQLAQAAKEKGCKTFVLVSSAGADPSSRFL--YMK-----MKGEVERDVIELDFKHIIILRP 166 (238)
T ss_pred cccccccCceEeechHHHHHHHHHHHhCCCeEEEEEeccCCCccccee--eee-----ccchhhhhhhhccccEEEEecC
Confidence 11 5667899999999999999987665543 222 244667777787775 889999
Q ss_pred CCcccC
Q 021928 233 GVLQNT 238 (305)
Q Consensus 233 g~l~~~ 238 (305)
|.+...
T Consensus 167 G~ll~~ 172 (238)
T KOG4039|consen 167 GPLLGE 172 (238)
T ss_pred cceecc
Confidence 996543
|
|
| >PRK07984 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.33 E-value=6.9e-11 Score=106.75 Aligned_cols=190 Identities=12% Similarity=0.075 Sum_probs=118.2
Q ss_pred CCCEEEEEcCCC--hHHHHHHHHHHhCCCeEEEEEcCcc---hhhhhc--CCCcEEeecCCCCHHHHHHHhc-------C
Q 021928 97 ARDAVLVTDGDS--DIGQMVILSLIVKRTRIKALVKDKR---NAMESF--GTYVESMAGDASNKKFLKTALR-------G 162 (305)
Q Consensus 97 ~~~~vlVtGatG--~iG~~l~~~L~~~g~~V~~~~R~~~---~~~~~~--~~~v~~v~~D~~d~~~~~~~~~-------~ 162 (305)
.+++++||||++ +||++++++|+++|++|+++.|+.. ...+.. ...+.++.+|++|.++++++++ .
T Consensus 5 ~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 84 (262)
T PRK07984 5 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVWPK 84 (262)
T ss_pred CCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecchhHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhcCC
Confidence 358999999985 9999999999999999998888731 111111 1346688999999988877663 4
Q ss_pred ccEEEECCcc----------h---------------------Hhhhhhh--cCCCEEEEEcccccccCCCCcccccchHH
Q 021928 163 VRSIICPSEG----------F---------------------ISNAGSL--KGVQHVILLSQLSVYRGSGGIQALMKGNA 209 (305)
Q Consensus 163 ~d~Vi~~~~g----------~---------------------~~~~a~~--~gv~~~V~iSS~~~~~~~~~~~~~~~~~~ 209 (305)
+|.+|++++- . +..++.. ..-.+||++||.+...+.+....|..++.
T Consensus 85 iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~iss~~~~~~~~~~~~Y~asKa 164 (262)
T PRK07984 85 FDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPNYNVMGLAKA 164 (262)
T ss_pred CCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcCCcEEEEEecCCCCCCCCCcchhHHHHH
Confidence 6999987430 0 0001100 11258999999876654444444543332
Q ss_pred --HHHHHHHHHHHHhCCCCEEEEecCCcccCCCCC-cc--eee---ecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcE
Q 021928 210 --RKLAEQDESMLMASGIPYTIIRTGVLQNTPGGK-QG--FQF---EEGCAANGSLSKEDAAFICVEALESIP--QTGLI 279 (305)
Q Consensus 210 --~~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~-~~--~~~---~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~ 279 (305)
..+.+.....+...++.+..|.||++....... .. ... ........+..++|||.+++.++.... ..++.
T Consensus 165 al~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~~~~L~s~~~~~itG~~ 244 (262)
T PRK07984 165 SLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAAFLCSDLSAGISGEV 244 (262)
T ss_pred HHHHHHHHHHHHhcccCcEEeeeecCcccchHHhcCCchHHHHHHHHHcCCCcCCCCHHHHHHHHHHHcCcccccccCcE
Confidence 122222233345578999999999964321110 00 000 001112345688999999999997533 45778
Q ss_pred EEEecCC
Q 021928 280 FEVVNGE 286 (305)
Q Consensus 280 ~~v~~g~ 286 (305)
+.+.+|.
T Consensus 245 i~vdgg~ 251 (262)
T PRK07984 245 VHVDGGF 251 (262)
T ss_pred EEECCCc
Confidence 8777663
|
|
| >KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.32 E-value=6.1e-11 Score=102.29 Aligned_cols=191 Identities=13% Similarity=0.152 Sum_probs=128.7
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCC---eEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCc--cEEEEC---
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRT---RIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGV--RSIICP--- 169 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~---~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~--d~Vi~~--- 169 (305)
+++|+|||++|.+|++|++-+..+|. +.+..... .+|+++.++.++.|+.. ..|||+
T Consensus 1 s~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~sk---------------d~DLt~~a~t~~lF~~ekPthVIhlAAm 65 (315)
T KOG1431|consen 1 SKKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIGSK---------------DADLTNLADTRALFESEKPTHVIHLAAM 65 (315)
T ss_pred CceEEEecCCchHHHHHHHHHHhcCCCCcceEEeccc---------------cccccchHHHHHHHhccCCceeeehHhh
Confidence 48999999999999999999999885 22222211 26888988888888764 677776
Q ss_pred Ccch--------------------HhhhhhhcCCCEEEEEcccccccCC--------------CCcccccchHHHHHHH-
Q 021928 170 SEGF--------------------ISNAGSLKGVQHVILLSQLSVYRGS--------------GGIQALMKGNARKLAE- 214 (305)
Q Consensus 170 ~~g~--------------------~~~~a~~~gv~~~V~iSS~~~~~~~--------------~~~~~~~~~~~~~~~~- 214 (305)
.+|. +...|.+.|++++|+.-|.+.+... ..+..+.-+.+++...
T Consensus 66 VGGlf~N~~ynldF~r~Nl~indNVlhsa~e~gv~K~vsclStCIfPdkt~yPIdEtmvh~gpphpsN~gYsyAKr~idv 145 (315)
T KOG1431|consen 66 VGGLFHNNTYNLDFIRKNLQINDNVLHSAHEHGVKKVVSCLSTCIFPDKTSYPIDETMVHNGPPHPSNFGYSYAKRMIDV 145 (315)
T ss_pred hcchhhcCCCchHHHhhcceechhHHHHHHHhchhhhhhhcceeecCCCCCCCCCHHHhccCCCCCCchHHHHHHHHHHH
Confidence 2332 3345778999999999888776521 1111111111222221
Q ss_pred HHHHHHHhCCCCEEEEecCCcccCCC------------------------CCcceeeecCCCCCCccCHHHHHHHHHHHh
Q 021928 215 QDESMLMASGIPYTIIRTGVLQNTPG------------------------GKQGFQFEEGCAANGSLSKEDAAFICVEAL 270 (305)
Q Consensus 215 ~aE~~l~~~gi~~tilRPg~l~~~~~------------------------~~~~~~~~~~~~~~~~Is~~DvA~~iv~~l 270 (305)
....|-++.|.++|.+-|..+.+... ......++.|.+.+.+|+.+|+|++++++|
T Consensus 146 ~n~aY~~qhg~~~tsviPtNvfGphDNfnpe~sHVlPali~r~h~ak~~gtd~~~VwGsG~PlRqFiys~DLA~l~i~vl 225 (315)
T KOG1431|consen 146 QNQAYRQQHGRDYTSVIPTNVFGPHDNFNPENSHVLPALIHRFHEAKRNGTDELTVWGSGSPLRQFIYSDDLADLFIWVL 225 (315)
T ss_pred HHHHHHHHhCCceeeeccccccCCCCCCCcccccchHHHHHHHHHHHhcCCceEEEecCCChHHHHhhHhHHHHHHHHHH
Confidence 12345567899999998887542210 112234567778889999999999999999
Q ss_pred hCCCCCCcEEEEecCC---cCHHHHHHHHHHhhhhcC
Q 021928 271 ESIPQTGLIFEVVNGE---EKVSDWKKCFSRLMEKTG 304 (305)
Q Consensus 271 ~~~~~~~~~~~v~~g~---~s~~d~~~~~~~l~~~~~ 304 (305)
++-... +.++++.|+ .+++|.+++..++.+-.|
T Consensus 226 r~Y~~v-Epiils~ge~~EVtI~e~aeaV~ea~~F~G 261 (315)
T KOG1431|consen 226 REYEGV-EPIILSVGESDEVTIREAAEAVVEAVDFTG 261 (315)
T ss_pred HhhcCc-cceEeccCccceeEHHHHHHHHHHHhCCCc
Confidence 865433 456666654 489999999999887655
|
|
| >KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.32 E-value=9.2e-11 Score=105.53 Aligned_cols=176 Identities=16% Similarity=0.145 Sum_probs=124.7
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhc---C--CCcEEeecCCCCHHHHHHHh-------cC
Q 021928 95 PEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF---G--TYVESMAGDASNKKFLKTAL-------RG 162 (305)
Q Consensus 95 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~---~--~~v~~v~~D~~d~~~~~~~~-------~~ 162 (305)
+..++.||||||++++|++++.+++++|.++++.+.+.+...+.. . ..+....+|++|++.+.+.. .+
T Consensus 35 ~v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~Vk~e~G~ 114 (300)
T KOG1201|consen 35 SVSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRLAKKVKKEVGD 114 (300)
T ss_pred hccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcCceeEEEecCCCHHHHHHHHHHHHHhcCC
Confidence 446799999999999999999999999999988888875533211 1 26889999999987765444 45
Q ss_pred ccEEEECCc---ch---------------------------HhhhhhhcCCCEEEEEcccccccCCCCcccccchH--HH
Q 021928 163 VRSIICPSE---GF---------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGN--AR 210 (305)
Q Consensus 163 ~d~Vi~~~~---g~---------------------------~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~--~~ 210 (305)
+|++|++++ +. +...+.+..-.|+|-++|..+.-+..+...|..++ +.
T Consensus 115 V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~~GHIV~IaS~aG~~g~~gl~~YcaSK~a~v 194 (300)
T KOG1201|consen 115 VDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENNNGHIVTIASVAGLFGPAGLADYCASKFAAV 194 (300)
T ss_pred ceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcCCceEEEehhhhcccCCccchhhhhhHHHHH
Confidence 788887744 10 12224456667999999998888888887777655 34
Q ss_pred HHHHHHHHHHHh---CCCCEEEEecCCcccCCCCCcceeeecCCCCCCccCHHHHHHHHHHHhhCCC
Q 021928 211 KLAEQDESMLMA---SGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIP 274 (305)
Q Consensus 211 ~~~~~aE~~l~~---~gi~~tilRPg~l~~~~~~~~~~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~ 274 (305)
.+++.....|+. .+++.|.+-|+.+..+.-.+. . .-......+..+-||+.+++++...+
T Consensus 195 GfhesL~~EL~~~~~~~IktTlv~P~~i~Tgmf~~~---~-~~~~l~P~L~p~~va~~Iv~ai~~n~ 257 (300)
T KOG1201|consen 195 GFHESLSMELRALGKDGIKTTLVCPYFINTGMFDGA---T-PFPTLAPLLEPEYVAKRIVEAILTNQ 257 (300)
T ss_pred HHHHHHHHHHHhcCCCCeeEEEEeeeeccccccCCC---C-CCccccCCCCHHHHHHHHHHHHHcCC
Confidence 444444444554 568899999988653322111 0 11233567899999999999998654
|
|
| >PRK06997 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.32 E-value=9.9e-11 Score=105.43 Aligned_cols=189 Identities=16% Similarity=0.144 Sum_probs=115.6
Q ss_pred CCCEEEEEcC--CChHHHHHHHHHHhCCCeEEEEEcC---cchhhh---hcCCCcEEeecCCCCHHHHHHHhc-------
Q 021928 97 ARDAVLVTDG--DSDIGQMVILSLIVKRTRIKALVKD---KRNAME---SFGTYVESMAGDASNKKFLKTALR------- 161 (305)
Q Consensus 97 ~~~~vlVtGa--tG~iG~~l~~~L~~~g~~V~~~~R~---~~~~~~---~~~~~v~~v~~D~~d~~~~~~~~~------- 161 (305)
..++++|||| +++||++++++|+++|++|++..|. .+...+ ..+ ...++.+|++|.+++.++++
T Consensus 5 ~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g 83 (260)
T PRK06997 5 AGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFG-SDLVFPCDVASDEQIDALFASLGQHWD 83 (260)
T ss_pred CCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHHHHHHHHhcC-CcceeeccCCCHHHHHHHHHHHHHHhC
Confidence 3589999996 6799999999999999999987654 222221 122 23468899999988877664
Q ss_pred CccEEEECCcc---------hHhh----------------------h-hhh-cCCCEEEEEcccccccCCCCcccccchH
Q 021928 162 GVRSIICPSEG---------FISN----------------------A-GSL-KGVQHVILLSQLSVYRGSGGIQALMKGN 208 (305)
Q Consensus 162 ~~d~Vi~~~~g---------~~~~----------------------~-a~~-~gv~~~V~iSS~~~~~~~~~~~~~~~~~ 208 (305)
.+|++|++++. .+.+ + ... .+-.++|++||.....+......|...+
T Consensus 84 ~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~~g~Ii~iss~~~~~~~~~~~~Y~asK 163 (260)
T PRK06997 84 GLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAERVVPNYNTMGLAK 163 (260)
T ss_pred CCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeccccccCCCCcchHHHHH
Confidence 47999987321 0000 0 000 1225899999987755443334444332
Q ss_pred H--HHHHHHHHHHHHhCCCCEEEEecCCcccCCCCC----cce--eeecCCCCCCccCHHHHHHHHHHHhhCCC--CCCc
Q 021928 209 A--RKLAEQDESMLMASGIPYTIIRTGVLQNTPGGK----QGF--QFEEGCAANGSLSKEDAAFICVEALESIP--QTGL 278 (305)
Q Consensus 209 ~--~~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~----~~~--~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~ 278 (305)
+ ..+.+.....+...++.++.|.||++....... ... .+....+...+..++|||+++..++..+. ..++
T Consensus 164 aal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~~~~l~s~~~~~itG~ 243 (260)
T PRK06997 164 ASLEASVRYLAVSLGPKGIRANGISAGPIKTLAASGIKDFGKILDFVESNAPLRRNVTIEEVGNVAAFLLSDLASGVTGE 243 (260)
T ss_pred HHHHHHHHHHHHHhcccCeEEEEEeeCccccchhccccchhhHHHHHHhcCcccccCCHHHHHHHHHHHhCccccCccee
Confidence 2 111222223344578999999999864321110 000 00001112345688999999999997543 4678
Q ss_pred EEEEecCC
Q 021928 279 IFEVVNGE 286 (305)
Q Consensus 279 ~~~v~~g~ 286 (305)
++.+.+|.
T Consensus 244 ~i~vdgg~ 251 (260)
T PRK06997 244 ITHVDSGF 251 (260)
T ss_pred EEEEcCCh
Confidence 88887663
|
|
| >PRK08862 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.31 E-value=4.7e-11 Score=105.57 Aligned_cols=170 Identities=7% Similarity=0.025 Sum_probs=110.4
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh------cCCCcEEeecCCCCHHHHHHHh-------c-C
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTAL-------R-G 162 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~~~v~~v~~D~~d~~~~~~~~-------~-~ 162 (305)
++++++||||+++||++++++|+++|++|+++.|+.++..+. .+.++..+.+|+.|.+++++++ . .
T Consensus 4 ~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~ 83 (227)
T PRK08862 4 KSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFNRA 83 (227)
T ss_pred CCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 458999999999999999999999999999999987664322 2345778889999988887654 3 5
Q ss_pred ccEEEECCcc-----hH--------------------------hhhhhhc-CCCEEEEEcccccccCCCCcccccchHH-
Q 021928 163 VRSIICPSEG-----FI--------------------------SNAGSLK-GVQHVILLSQLSVYRGSGGIQALMKGNA- 209 (305)
Q Consensus 163 ~d~Vi~~~~g-----~~--------------------------~~~a~~~-gv~~~V~iSS~~~~~~~~~~~~~~~~~~- 209 (305)
+|++|++++. .+ .....+. +-..||++||..... ....|...++
T Consensus 84 iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~---~~~~Y~asKaa 160 (227)
T PRK08862 84 PDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISHDDHQ---DLTGVESSNAL 160 (227)
T ss_pred CCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecCCCCC---CcchhHHHHHH
Confidence 8999988431 00 0112222 246899999875432 2233433322
Q ss_pred -HHHHHHHHHHHHhCCCCEEEEecCCcccCCCCCcceeeecCCCCCCccC-HHHHHHHHHHHhhCCCCCCcE
Q 021928 210 -RKLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLS-KEDAAFICVEALESIPQTGLI 279 (305)
Q Consensus 210 -~~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~~~~~~~~~~~~~~~Is-~~DvA~~iv~~l~~~~~~~~~ 279 (305)
..+.+.....+...++.+..|.||++........ + .|.. .+|++.+...++.++...|..
T Consensus 161 l~~~~~~la~el~~~~Irvn~v~PG~i~t~~~~~~-------~---~~~~~~~~~~~~~~~l~~~~~~tg~~ 222 (227)
T PRK08862 161 VSGFTHSWAKELTPFNIRVGGVVPSIFSANGELDA-------V---HWAEIQDELIRNTEYIVANEYFSGRV 222 (227)
T ss_pred HHHHHHHHHHHHhhcCcEEEEEecCcCcCCCccCH-------H---HHHHHHHHHHhheeEEEecccccceE
Confidence 1222233344556899999999999755421100 0 1111 289999988888755444443
|
|
| >PRK05854 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.30 E-value=4.8e-11 Score=110.48 Aligned_cols=76 Identities=12% Similarity=0.083 Sum_probs=61.7
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh-------c-CCCcEEeecCCCCHHHHHHHhc-----
Q 021928 95 PEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------F-GTYVESMAGDASNKKFLKTALR----- 161 (305)
Q Consensus 95 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~-------~-~~~v~~v~~D~~d~~~~~~~~~----- 161 (305)
+..+++++||||+++||++++++|+++|++|++++|+.++..+. . ...+.++.+|+.|.++++++++
T Consensus 11 ~l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~~ 90 (313)
T PRK05854 11 DLSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRAE 90 (313)
T ss_pred ccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHHh
Confidence 34569999999999999999999999999999999987653221 1 2357899999999988876654
Q ss_pred --CccEEEECC
Q 021928 162 --GVRSIICPS 170 (305)
Q Consensus 162 --~~d~Vi~~~ 170 (305)
.+|++|+++
T Consensus 91 ~~~iD~li~nA 101 (313)
T PRK05854 91 GRPIHLLINNA 101 (313)
T ss_pred CCCccEEEECC
Confidence 479999874
|
|
| >PRK07889 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.28 E-value=1.8e-10 Score=103.49 Aligned_cols=187 Identities=14% Similarity=0.069 Sum_probs=114.2
Q ss_pred CCCEEEEEcC--CChHHHHHHHHHHhCCCeEEEEEcCc--chhh---hhcCCCcEEeecCCCCHHHHHHHh-------cC
Q 021928 97 ARDAVLVTDG--DSDIGQMVILSLIVKRTRIKALVKDK--RNAM---ESFGTYVESMAGDASNKKFLKTAL-------RG 162 (305)
Q Consensus 97 ~~~~vlVtGa--tG~iG~~l~~~L~~~g~~V~~~~R~~--~~~~---~~~~~~v~~v~~D~~d~~~~~~~~-------~~ 162 (305)
.+++++|||| +++||.+++++|+++|++|+++.|+. +... +..+..+.++.+|++|.+++++++ ..
T Consensus 6 ~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~ 85 (256)
T PRK07889 6 EGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRLPEPAPVLELDVTNEEHLASLADRVREHVDG 85 (256)
T ss_pred cCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhcCCCCcEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence 3589999999 89999999999999999999998764 2111 223345788999999988877655 35
Q ss_pred ccEEEECCcc--------hH--------------------------hhhhhhcCCCEEEEEcccccccCCCCcccccchH
Q 021928 163 VRSIICPSEG--------FI--------------------------SNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGN 208 (305)
Q Consensus 163 ~d~Vi~~~~g--------~~--------------------------~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~ 208 (305)
+|++|++++. .+ ....+ .-.++|++|+.+. .+.+....|..++
T Consensus 86 iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~--~~g~Iv~is~~~~-~~~~~~~~Y~asK 162 (256)
T PRK07889 86 LDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMN--EGGSIVGLDFDAT-VAWPAYDWMGVAK 162 (256)
T ss_pred CcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhcc--cCceEEEEeeccc-ccCCccchhHHHH
Confidence 7999987321 00 00011 1257888876432 1111222222222
Q ss_pred H--HHHHHHHHHHHHhCCCCEEEEecCCcccCCCCC----cce--eeecCCCCC-CccCHHHHHHHHHHHhhCCC--CCC
Q 021928 209 A--RKLAEQDESMLMASGIPYTIIRTGVLQNTPGGK----QGF--QFEEGCAAN-GSLSKEDAAFICVEALESIP--QTG 277 (305)
Q Consensus 209 ~--~~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~----~~~--~~~~~~~~~-~~Is~~DvA~~iv~~l~~~~--~~~ 277 (305)
+ ..+.+.....+...++.++.|.||++....... ... .+....... .+.+++|+|++++.++.+.. ..+
T Consensus 163 aal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~~~~~~p~evA~~v~~l~s~~~~~~tG 242 (256)
T PRK07889 163 AALESTNRYLARDLGPRGIRVNLVAAGPIRTLAAKAIPGFELLEEGWDERAPLGWDVKDPTPVARAVVALLSDWFPATTG 242 (256)
T ss_pred HHHHHHHHHHHHHhhhcCeEEEeeccCcccChhhhcccCcHHHHHHHHhcCccccccCCHHHHHHHHHHHhCcccccccc
Confidence 1 112222333455689999999999964321110 000 000001111 35789999999999997643 367
Q ss_pred cEEEEecCC
Q 021928 278 LIFEVVNGE 286 (305)
Q Consensus 278 ~~~~v~~g~ 286 (305)
+++.+.+|.
T Consensus 243 ~~i~vdgg~ 251 (256)
T PRK07889 243 EIVHVDGGA 251 (256)
T ss_pred eEEEEcCce
Confidence 888777653
|
|
| >PRK08303 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.27 E-value=5.2e-10 Score=103.28 Aligned_cols=185 Identities=10% Similarity=-0.009 Sum_probs=111.2
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcc----------hhhh------hcCCCcEEeecCCCCHHHHHHHh
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR----------NAME------SFGTYVESMAGDASNKKFLKTAL 160 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~----------~~~~------~~~~~v~~v~~D~~d~~~~~~~~ 160 (305)
.+|+++||||+++||++++++|++.|++|+++.|+.. ...+ ..+..+.++.+|++|.+++++++
T Consensus 7 ~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~ 86 (305)
T PRK08303 7 RGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVRALV 86 (305)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHH
Confidence 4589999999999999999999999999999999742 1111 11335778999999988877655
Q ss_pred c-------CccEEEECC-cc--------hH--------------------------hhhhhhcCCCEEEEEccccccc-C
Q 021928 161 R-------GVRSIICPS-EG--------FI--------------------------SNAGSLKGVQHVILLSQLSVYR-G 197 (305)
Q Consensus 161 ~-------~~d~Vi~~~-~g--------~~--------------------------~~~a~~~gv~~~V~iSS~~~~~-~ 197 (305)
+ .+|++|+++ +. .+ .....+.+-.+||++||..+.. .
T Consensus 87 ~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~~g~IV~isS~~~~~~~ 166 (305)
T PRK08303 87 ERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRPGGLVVEITDGTAEYNA 166 (305)
T ss_pred HHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCCCcEEEEECCccccccC
Confidence 3 579999775 31 00 0012223346899999865432 1
Q ss_pred C--CCcccccchHH--HHHHHHHHHHHHhCCCCEEEEecCCcccCCC------CCccee-eecCCC-CCCccCHHHHHHH
Q 021928 198 S--GGIQALMKGNA--RKLAEQDESMLMASGIPYTIIRTGVLQNTPG------GKQGFQ-FEEGCA-ANGSLSKEDAAFI 265 (305)
Q Consensus 198 ~--~~~~~~~~~~~--~~~~~~aE~~l~~~gi~~tilRPg~l~~~~~------~~~~~~-~~~~~~-~~~~Is~~DvA~~ 265 (305)
. .....|...++ ..+.+.....+...++.+..|.||++..... ...... ...... ....-+++|+|.+
T Consensus 167 ~~~~~~~~Y~asKaal~~lt~~La~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~p~~~~~~~peevA~~ 246 (305)
T PRK08303 167 THYRLSVFYDLAKTSVNRLAFSLAHELAPHGATAVALTPGWLRSEMMLDAFGVTEENWRDALAKEPHFAISETPRYVGRA 246 (305)
T ss_pred cCCCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEecCCccccHHHHHhhccCccchhhhhccccccccCCCHHHHHHH
Confidence 1 11223433222 1122222233556789999999998643211 000000 000011 1223478999999
Q ss_pred HHHHhhCCC---CCCcEEE
Q 021928 266 CVEALESIP---QTGLIFE 281 (305)
Q Consensus 266 iv~~l~~~~---~~~~~~~ 281 (305)
++.++.++. ..|+.+.
T Consensus 247 v~fL~s~~~~~~itG~~l~ 265 (305)
T PRK08303 247 VAALAADPDVARWNGQSLS 265 (305)
T ss_pred HHHHHcCcchhhcCCcEEE
Confidence 999997653 2455443
|
|
| >PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.27 E-value=4e-10 Score=107.66 Aligned_cols=74 Identities=18% Similarity=0.214 Sum_probs=62.9
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhc---CCCcEEeecCCCCHHHHHHHhcCccEEEECC
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF---GTYVESMAGDASNKKFLKTALRGVRSIICPS 170 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~---~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~ 170 (305)
++|+|+||||+|+||++++++|+++|++|+++.|++++..+.. ...+..+.+|++|.+++.+.+.++|++|+++
T Consensus 177 ~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd~~~v~~~l~~IDiLInnA 253 (406)
T PRK07424 177 KGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEINGEDLPVKTLHWQVGQEAALAELLEKVDILIINH 253 (406)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCCHHHHHHHhCCCCEEEECC
Confidence 4689999999999999999999999999999999876543222 2246788999999999999999999999873
|
|
| >TIGR01289 LPOR light-dependent protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=99.26 E-value=1.3e-10 Score=107.65 Aligned_cols=74 Identities=15% Similarity=0.231 Sum_probs=59.7
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCC-CeEEEEEcCcchhhhh---c---CCCcEEeecCCCCHHHHHHHh-------cC
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAMES---F---GTYVESMAGDASNKKFLKTAL-------RG 162 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~R~~~~~~~~---~---~~~v~~v~~D~~d~~~~~~~~-------~~ 162 (305)
++++++||||+++||++++++|+++| ++|++++|+.++..+. + +..+.++.+|++|.+++++++ .+
T Consensus 2 ~~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~ 81 (314)
T TIGR01289 2 QKPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGRP 81 (314)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence 46899999999999999999999999 9999999987653221 1 235778899999988876655 35
Q ss_pred ccEEEECC
Q 021928 163 VRSIICPS 170 (305)
Q Consensus 163 ~d~Vi~~~ 170 (305)
+|++|+++
T Consensus 82 iD~lI~nA 89 (314)
T TIGR01289 82 LDALVCNA 89 (314)
T ss_pred CCEEEECC
Confidence 79999873
|
This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form. |
| >KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.22 E-value=4.1e-10 Score=97.33 Aligned_cols=175 Identities=18% Similarity=0.157 Sum_probs=111.7
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhC-CCe-EEEEEcCcchhhh---h---cCCCcEEeecCCCCHHHHHHHhc--------
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVK-RTR-IKALVKDKRNAME---S---FGTYVESMAGDASNKKFLKTALR-------- 161 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~-g~~-V~~~~R~~~~~~~---~---~~~~v~~v~~D~~d~~~~~~~~~-------- 161 (305)
++.|+||||+.+||..++++|++. |.+ +++..|+++++.+ . ...++++++.|+++.+++.++.+
T Consensus 3 pksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~V~~iVg~ 82 (249)
T KOG1611|consen 3 PKSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKAATELALKSKSDSRVHIIQLDVTCDESIDNFVQEVEKIVGS 82 (249)
T ss_pred CccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHhhHHHHHhhccCCceEEEEEecccHHHHHHHHHHHHhhccc
Confidence 477999999999999999999975 454 4456777877322 1 24689999999999888876664
Q ss_pred -CccEEEECCcch-------------------------------HhhhhhhcCCC-----------EEEEEcccccccCC
Q 021928 162 -GVRSIICPSEGF-------------------------------ISNAGSLKGVQ-----------HVILLSQLSVYRGS 198 (305)
Q Consensus 162 -~~d~Vi~~~~g~-------------------------------~~~~a~~~gv~-----------~~V~iSS~~~~~~~ 198 (305)
|++.++.+++-. +..+.+++.-+ .||++||.....+.
T Consensus 83 ~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS~~~s~~~ 162 (249)
T KOG1611|consen 83 DGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISSSAGSIGG 162 (249)
T ss_pred CCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeeccccccCC
Confidence 456667553300 11122222222 68889887665443
Q ss_pred CCcccccchHHHH-----HHHHHHHHHHhCCCCEEEEecCCcccCCCCCcceeeecCCCCCCccCHHHHHHHHHHHhhC-
Q 021928 199 GGIQALMKGNARK-----LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALES- 272 (305)
Q Consensus 199 ~~~~~~~~~~~~~-----~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~~~~~~~~~~~~~~~Is~~DvA~~iv~~l~~- 272 (305)
.....+..|+..+ +.+..-..|+..++-++.+.|||+..+-++. ...+++|+-+.-++..+.+
T Consensus 163 ~~~~~~~AYrmSKaAlN~f~ksls~dL~~~~ilv~sihPGwV~TDMgg~-----------~a~ltveeSts~l~~~i~kL 231 (249)
T KOG1611|consen 163 FRPGGLSAYRMSKAALNMFAKSLSVDLKDDHILVVSIHPGWVQTDMGGK-----------KAALTVEESTSKLLASINKL 231 (249)
T ss_pred CCCcchhhhHhhHHHHHHHHHHhhhhhcCCcEEEEEecCCeEEcCCCCC-----------CcccchhhhHHHHHHHHHhc
Confidence 3333333332211 1122223355678889999999976655542 3567888888888887764
Q ss_pred -CCCCCcEEEEe
Q 021928 273 -IPQTGLIFEVV 283 (305)
Q Consensus 273 -~~~~~~~~~v~ 283 (305)
++++|..|+-.
T Consensus 232 ~~~hnG~ffn~d 243 (249)
T KOG1611|consen 232 KNEHNGGFFNRD 243 (249)
T ss_pred CcccCcceEccC
Confidence 55667666654
|
|
| >smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=99.21 E-value=2.7e-10 Score=94.70 Aligned_cols=135 Identities=19% Similarity=0.241 Sum_probs=92.3
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcchhhh---------hcCCCcEEeecCCCCHHHHHHHhc-------
Q 021928 99 DAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAME---------SFGTYVESMAGDASNKKFLKTALR------- 161 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~---------~~~~~v~~v~~D~~d~~~~~~~~~------- 161 (305)
++++||||+|+||.+++++|+++|+ .|+++.|++..... ..+.++.++.+|+++.+++.++++
T Consensus 1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 80 (180)
T smart00822 1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEALGAEVTVVACDVADRAALAAALAAIPARLG 80 (180)
T ss_pred CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 5799999999999999999999996 68888887543211 123467789999999888777654
Q ss_pred CccEEEECCcc-----h---------------------HhhhhhhcCCCEEEEEcccccccCCCCcccccchHHHHHHHH
Q 021928 162 GVRSIICPSEG-----F---------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQ 215 (305)
Q Consensus 162 ~~d~Vi~~~~g-----~---------------------~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~~~~~~ 215 (305)
.+|.+|++++. . +..+++..+.+++|++||.....+......|... +.....
T Consensus 81 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ii~~ss~~~~~~~~~~~~y~~s--k~~~~~ 158 (180)
T smart00822 81 PLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRDLPLDFFVLFSSVAGVLGNPGQANYAAA--NAFLDA 158 (180)
T ss_pred CeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhccCCcceEEEEccHHHhcCCCCchhhHHH--HHHHHH
Confidence 35999987430 0 2233445677899999998765554444344332 212222
Q ss_pred HHHHHHhCCCCEEEEecCCc
Q 021928 216 DESMLMASGIPYTIIRTGVL 235 (305)
Q Consensus 216 aE~~l~~~gi~~tilRPg~l 235 (305)
.-+.++..+++++.+.||..
T Consensus 159 ~~~~~~~~~~~~~~~~~g~~ 178 (180)
T smart00822 159 LAAHRRARGLPATSINWGAW 178 (180)
T ss_pred HHHHHHhcCCceEEEeeccc
Confidence 22445678999999999874
|
It uses NADPH to reduce the keto group to a hydroxy group. |
| >PLN00015 protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=99.18 E-value=5.1e-10 Score=103.34 Aligned_cols=69 Identities=13% Similarity=0.155 Sum_probs=55.7
Q ss_pred EEEcCCChHHHHHHHHHHhCC-CeEEEEEcCcchhhhh---c---CCCcEEeecCCCCHHHHHHHhc-------CccEEE
Q 021928 102 LVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAMES---F---GTYVESMAGDASNKKFLKTALR-------GVRSII 167 (305)
Q Consensus 102 lVtGatG~iG~~l~~~L~~~g-~~V~~~~R~~~~~~~~---~---~~~v~~v~~D~~d~~~~~~~~~-------~~d~Vi 167 (305)
+||||+++||.+++++|+++| ++|++++|+.++..+. . +..+.++.+|+.|.++++++++ .+|++|
T Consensus 1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~lI 80 (308)
T PLN00015 1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDVLV 80 (308)
T ss_pred CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCEEE
Confidence 699999999999999999999 9999999987653221 1 2357888999999888776653 479999
Q ss_pred ECC
Q 021928 168 CPS 170 (305)
Q Consensus 168 ~~~ 170 (305)
+++
T Consensus 81 nnA 83 (308)
T PLN00015 81 CNA 83 (308)
T ss_pred ECC
Confidence 873
|
|
| >KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.17 E-value=4.6e-09 Score=95.32 Aligned_cols=191 Identities=16% Similarity=0.134 Sum_probs=123.3
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh----c-----CCCcEEeecCCCCHHHHHHH-------
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES----F-----GTYVESMAGDASNKKFLKTA------- 159 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~----~-----~~~v~~v~~D~~d~~~~~~~------- 159 (305)
..+|.++||||+.+||+++|++|++.|.+|++..|+++...+. . +..+..+.+|+++.+..+++
T Consensus 6 l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~~ 85 (270)
T KOG0725|consen 6 LAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVEK 85 (270)
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHHH
Confidence 3569999999999999999999999999999999998763221 1 23588999999986554433
Q ss_pred -hcCccEEEECCcch--------------------------------HhhhhhhcCCCEEEEEcccccccCCCCc-cccc
Q 021928 160 -LRGVRSIICPSEGF--------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGI-QALM 205 (305)
Q Consensus 160 -~~~~d~Vi~~~~g~--------------------------------~~~~a~~~gv~~~V~iSS~~~~~~~~~~-~~~~ 205 (305)
+..+|++|++++.. .....++.+-..++++||.......... ..|.
T Consensus 86 ~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg~I~~~ss~~~~~~~~~~~~~Y~ 165 (270)
T KOG0725|consen 86 FFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKGGSIVNISSVAGVGPGPGSGVAYG 165 (270)
T ss_pred hCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCCceEEEEeccccccCCCCCcccch
Confidence 34579999773310 0011334456789999998776553333 3444
Q ss_pred chH--HHHHHHHHHHHHHhCCCCEEEEecCCcccCCCC-C------ccee-e--ecCC-CCCCccCHHHHHHHHHHHhhC
Q 021928 206 KGN--ARKLAEQDESMLMASGIPYTIIRTGVLQNTPGG-K------QGFQ-F--EEGC-AANGSLSKEDAAFICVEALES 272 (305)
Q Consensus 206 ~~~--~~~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~-~------~~~~-~--~~~~-~~~~~Is~~DvA~~iv~~l~~ 272 (305)
..+ ...+.+.....+...++++..|-||.+...... . +.+. . .... ........+|+|..++.++..
T Consensus 166 ~sK~al~~ltr~lA~El~~~gIRvN~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~p~gr~g~~~eva~~~~fla~~ 245 (270)
T KOG0725|consen 166 VSKAALLQLTRSLAKELAKHGIRVNSVSPGLVKTSLRAAGLDDGEMEEFKEATDSKGAVPLGRVGTPEEVAEAAAFLASD 245 (270)
T ss_pred hHHHHHHHHHHHHHHHHhhcCcEEEEeecCcEeCCccccccccchhhHHhhhhccccccccCCccCHHHHHHhHHhhcCc
Confidence 332 222223333446678999999999985433210 0 0000 0 0111 223455789999999998876
Q ss_pred CC--CCCcEEEEecCC
Q 021928 273 IP--QTGLIFEVVNGE 286 (305)
Q Consensus 273 ~~--~~~~~~~v~~g~ 286 (305)
.. ..|+.+.+.+|.
T Consensus 246 ~asyitG~~i~vdgG~ 261 (270)
T KOG0725|consen 246 DASYITGQTIIVDGGF 261 (270)
T ss_pred ccccccCCEEEEeCCE
Confidence 43 357777777664
|
|
| >KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.17 E-value=1.4e-09 Score=98.36 Aligned_cols=176 Identities=16% Similarity=0.160 Sum_probs=122.0
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhc---C-----CCcEEeecCCCCHHHHHHHhcC------
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF---G-----TYVESMAGDASNKKFLKTALRG------ 162 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~---~-----~~v~~v~~D~~d~~~~~~~~~~------ 162 (305)
++.+|+|||++.++|..++..+..+|++|.++.|+..+..+.. . ..|.+..+|+.|.+++..++++
T Consensus 32 ~~~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~~ 111 (331)
T KOG1210|consen 32 PRRHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLEG 111 (331)
T ss_pred ccceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhccC
Confidence 4489999999999999999999999999999999988744321 1 1366888999999998887764
Q ss_pred -ccEEEECCcch--------------------------H----hhhhhhcC-CCEEEEEcccccccCCCCcccccchH--
Q 021928 163 -VRSIICPSEGF--------------------------I----SNAGSLKG-VQHVILLSQLSVYRGSGGIQALMKGN-- 208 (305)
Q Consensus 163 -~d~Vi~~~~g~--------------------------~----~~~a~~~g-v~~~V~iSS~~~~~~~~~~~~~~~~~-- 208 (305)
.|.+|++++.. + +.+.++.. ..+|+++||..+.-+-.+..+|.+.+
T Consensus 112 ~~d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a~~~i~GysaYs~sK~a 191 (331)
T KOG1210|consen 112 PIDNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLAMLGIYGYSAYSPSKFA 191 (331)
T ss_pred CcceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhhhcCcccccccccHHHH
Confidence 38999875521 0 01112211 33999999987776666677776654
Q ss_pred HHHHHHHHHHHHHhCCCCEEEEecCCc-ccCCC---CCcceeeecCCCCCCccCHHHHHHHHHHHhhC
Q 021928 209 ARKLAEQDESMLMASGIPYTIIRTGVL-QNTPG---GKQGFQFEEGCAANGSLSKEDAAFICVEALES 272 (305)
Q Consensus 209 ~~~~~~~aE~~l~~~gi~~tilRPg~l-~~~~~---~~~~~~~~~~~~~~~~Is~~DvA~~iv~~l~~ 272 (305)
.+.+.....+.+...++.++..-|+.+ +++.. ..++.....-....+.+..|++|.+++.-+.+
T Consensus 192 lrgLa~~l~qE~i~~~v~Vt~~~P~~~~tpGfE~En~tkP~~t~ii~g~ss~~~~e~~a~~~~~~~~r 259 (331)
T KOG1210|consen 192 LRGLAEALRQELIKYGVHVTLYYPPDTLTPGFERENKTKPEETKIIEGGSSVIKCEEMAKAIVKGMKR 259 (331)
T ss_pred HHHHHHHHHHHHhhcceEEEEEcCCCCCCCccccccccCchheeeecCCCCCcCHHHHHHHHHhHHhh
Confidence 344444455566678999999988873 33332 22222222223345668999999999987764
|
|
| >PLN02730 enoyl-[acyl-carrier-protein] reductase | Back alignment and domain information |
|---|
Probab=99.13 E-value=3.3e-09 Score=97.89 Aligned_cols=188 Identities=13% Similarity=0.035 Sum_probs=110.0
Q ss_pred CCCCEEEEEcC--CChHHHHHHHHHHhCCCeEEEEEcCcchhhhh--------------cC-----CCcEEeecCC--CC
Q 021928 96 EARDAVLVTDG--DSDIGQMVILSLIVKRTRIKALVKDKRNAMES--------------FG-----TYVESMAGDA--SN 152 (305)
Q Consensus 96 ~~~~~vlVtGa--tG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~--------------~~-----~~v~~v~~D~--~d 152 (305)
..+|++||||| +.+||.+++++|++.|++|++ .|+.+.+.+. .. .....+.+|+ .+
T Consensus 7 l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~ 85 (303)
T PLN02730 7 LRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAVFDT 85 (303)
T ss_pred CCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecceecCc
Confidence 45699999999 799999999999999999988 5553321110 01 1146778888 32
Q ss_pred H------------------HHHHHHh-------cCccEEEECCc--c----hH--------------------------h
Q 021928 153 K------------------KFLKTAL-------RGVRSIICPSE--G----FI--------------------------S 175 (305)
Q Consensus 153 ~------------------~~~~~~~-------~~~d~Vi~~~~--g----~~--------------------------~ 175 (305)
. +++.+++ ..+|++|++++ . .+ .
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~~~~~ 165 (303)
T PLN02730 86 PEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLLQHFG 165 (303)
T ss_pred cccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence 2 2444333 35799998742 1 00 0
Q ss_pred hhhhhcCCCEEEEEcccccccCCCCcc-cccchHH--HHHHHHHHHHHHh-CCCCEEEEecCCcccCCCCCcce---e--
Q 021928 176 NAGSLKGVQHVILLSQLSVYRGSGGIQ-ALMKGNA--RKLAEQDESMLMA-SGIPYTIIRTGVLQNTPGGKQGF---Q-- 246 (305)
Q Consensus 176 ~~a~~~gv~~~V~iSS~~~~~~~~~~~-~~~~~~~--~~~~~~aE~~l~~-~gi~~tilRPg~l~~~~~~~~~~---~-- 246 (305)
...++ + .++|++||.....+.+... .|..++. ..+.+.....+.. .++.++.|.||++.......... .
T Consensus 166 p~m~~-~-G~II~isS~a~~~~~p~~~~~Y~asKaAl~~l~~~la~El~~~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~ 243 (303)
T PLN02730 166 PIMNP-G-GASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKYKIRVNTISAGPLGSRAAKAIGFIDDMIE 243 (303)
T ss_pred HHHhc-C-CEEEEEechhhcCCCCCCchhhHHHHHHHHHHHHHHHHHhCcCCCeEEEEEeeCCccCchhhcccccHHHHH
Confidence 11222 2 6899999987655433222 3433322 1112222223333 68999999999965432211000 0
Q ss_pred -eecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEEEEecCC
Q 021928 247 -FEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVNGE 286 (305)
Q Consensus 247 -~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~v~~g~ 286 (305)
.........+..++|+|.+++.++.... ..++.+.+.+|.
T Consensus 244 ~~~~~~pl~r~~~peevA~~~~fLaS~~a~~itG~~l~vdGG~ 286 (303)
T PLN02730 244 YSYANAPLQKELTADEVGNAAAFLASPLASAITGATIYVDNGL 286 (303)
T ss_pred HHHhcCCCCCCcCHHHHHHHHHHHhCccccCccCCEEEECCCc
Confidence 0001111335688999999999997543 367888877653
|
|
| >KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.10 E-value=7.1e-09 Score=99.41 Aligned_cols=204 Identities=17% Similarity=0.239 Sum_probs=127.3
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCC---CeEEEEEcCcchh--h----h------------hcC---CCcEEeecCCCC
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKR---TRIKALVKDKRNA--M----E------------SFG---TYVESMAGDASN 152 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~R~~~~~--~----~------------~~~---~~v~~v~~D~~d 152 (305)
..|+|+|||||||+|.-+++.|+..- -+++++.|..... . . ..+ .++..+.||+.+
T Consensus 11 ~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi~~ 90 (467)
T KOG1221|consen 11 KNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDISE 90 (467)
T ss_pred CCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceeccccccC
Confidence 35999999999999999999999643 3788888875431 0 0 011 467889999985
Q ss_pred ------HHHHHHHhcCccEEEECCcc--h-----------------Hhhhhhh-cCCCEEEEEcccccccCC--------
Q 021928 153 ------KKFLKTALRGVRSIICPSEG--F-----------------ISNAGSL-KGVQHVILLSQLSVYRGS-------- 198 (305)
Q Consensus 153 ------~~~~~~~~~~~d~Vi~~~~g--~-----------------~~~~a~~-~gv~~~V~iSS~~~~~~~-------- 198 (305)
........+.+|+|||+++. + +.++|++ ...+-+|++|+..+....
T Consensus 91 ~~LGis~~D~~~l~~eV~ivih~AAtvrFde~l~~al~iNt~Gt~~~l~lak~~~~l~~~vhVSTAy~n~~~~~i~E~~y 170 (467)
T KOG1221|consen 91 PDLGISESDLRTLADEVNIVIHSAATVRFDEPLDVALGINTRGTRNVLQLAKEMVKLKALVHVSTAYSNCNVGHIEEKPY 170 (467)
T ss_pred cccCCChHHHHHHHhcCCEEEEeeeeeccchhhhhhhhhhhHhHHHHHHHHHHhhhhheEEEeehhheeccccccccccc
Confidence 34555677889999998542 1 3344544 467889999998664210
Q ss_pred ---C--Cccc-----------ccchH-----------HHHHHHHHHHHHHh--CCCCEEEEecCCccc-----CCC----
Q 021928 199 ---G--GIQA-----------LMKGN-----------ARKLAEQDESMLMA--SGIPYTIIRTGVLQN-----TPG---- 240 (305)
Q Consensus 199 ---~--~~~~-----------~~~~~-----------~~~~~~~aE~~l~~--~gi~~tilRPg~l~~-----~~~---- 240 (305)
. .... +.... ..-.|..+|+.+.+ .+++.+|+||+.+.. .++
T Consensus 171 ~~~~~~~~~~~i~~~~~~~~~~ld~~~~~l~~~~PNTYtfTKal~E~~i~~~~~~lPivIiRPsiI~st~~EP~pGWidn 250 (467)
T KOG1221|consen 171 PMPETCNPEKILKLDENLSDELLDQKAPKLLGGWPNTYTFTKALAEMVIQKEAENLPLVIIRPSIITSTYKEPFPGWIDN 250 (467)
T ss_pred CccccCCHHHHHhhhccchHHHHHHhhHHhcCCCCCceeehHhhHHHHHHhhccCCCeEEEcCCceeccccCCCCCcccc
Confidence 0 0000 00000 00012456777664 689999999987542 111
Q ss_pred --CCcceee-----------ecCCCCCCccCHHHHHHHHHHHhhC-----CCCCCcEEEEecCCc---CHHHHHHHHHHh
Q 021928 241 --GKQGFQF-----------EEGCAANGSLSKEDAAFICVEALES-----IPQTGLIFEVVNGEE---KVSDWKKCFSRL 299 (305)
Q Consensus 241 --~~~~~~~-----------~~~~~~~~~Is~~DvA~~iv~~l~~-----~~~~~~~~~v~~g~~---s~~d~~~~~~~l 299 (305)
+-.++.+ ...+.....|++|.|+.+++.+.-. +.....+|+++++.. ++.++.+...+.
T Consensus 251 ~~gp~g~i~g~gkGvlr~~~~d~~~~adiIPvD~vvN~~ia~~~~~~~~~~~~~~~IY~~tss~~Np~t~~~~~e~~~~~ 330 (467)
T KOG1221|consen 251 LNGPDGVIIGYGKGVLRCFLVDPKAVADIIPVDMVVNAMIASAWQHAGNSKEKTPPIYHLTSSNDNPVTWGDFIELALRY 330 (467)
T ss_pred CCCCceEEEEeccceEEEEEEccccccceeeHHHHHHHHHHHHHHHhccCCCCCCcEEEecccccCcccHHHHHHHHHHh
Confidence 1112222 2334456788999999999966521 112246999998763 677777776554
Q ss_pred h
Q 021928 300 M 300 (305)
Q Consensus 300 ~ 300 (305)
.
T Consensus 331 ~ 331 (467)
T KOG1221|consen 331 F 331 (467)
T ss_pred c
Confidence 3
|
|
| >PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=99.07 E-value=3.6e-09 Score=90.29 Aligned_cols=134 Identities=24% Similarity=0.285 Sum_probs=90.0
Q ss_pred EEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcc-h--h------hhhcCCCcEEeecCCCCHHHHHHHhcC-------
Q 021928 100 AVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKR-N--A------MESFGTYVESMAGDASNKKFLKTALRG------- 162 (305)
Q Consensus 100 ~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~-~--~------~~~~~~~v~~v~~D~~d~~~~~~~~~~------- 162 (305)
+++||||.|+||..+++.|++++. +|+++.|+.. . . .+..+..+.++.+|++|.+++.++++.
T Consensus 2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~~~ 81 (181)
T PF08659_consen 2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESAGARVEYVQCDVTDPEAVAAALAQLRQRFGP 81 (181)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTSHTTSS-
T ss_pred EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhCCCceeeeccCccCHHHHHHHHHHHHhccCC
Confidence 689999999999999999999985 8999999932 1 1 112345789999999999999988854
Q ss_pred ccEEEECCcc----h----------------------HhhhhhhcCCCEEEEEcccccccCCCCcccccchHHHHHHHHH
Q 021928 163 VRSIICPSEG----F----------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQD 216 (305)
Q Consensus 163 ~d~Vi~~~~g----~----------------------~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~~~~~~a 216 (305)
++.|||+++- . +.++.....++.||+.||+...-+..+...|...+. +.+..
T Consensus 82 i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~~~l~~~i~~SSis~~~G~~gq~~YaaAN~--~lda~ 159 (181)
T PF08659_consen 82 IDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALENRPLDFFILFSSISSLLGGPGQSAYAAANA--FLDAL 159 (181)
T ss_dssp EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTTTTTSEEEEEEEHHHHTT-TTBHHHHHHHH--HHHHH
T ss_pred cceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhcCCCCeEEEECChhHhccCcchHhHHHHHH--HHHHH
Confidence 4789988431 0 223345578899999999987766656555543222 22223
Q ss_pred HHHHHhCCCCEEEEecCCc
Q 021928 217 ESMLMASGIPYTIIRTGVL 235 (305)
Q Consensus 217 E~~l~~~gi~~tilRPg~l 235 (305)
-...+..+.+++.|..|..
T Consensus 160 a~~~~~~g~~~~sI~wg~W 178 (181)
T PF08659_consen 160 ARQRRSRGLPAVSINWGAW 178 (181)
T ss_dssp HHHHHHTTSEEEEEEE-EB
T ss_pred HHHHHhCCCCEEEEEcccc
Confidence 3445678899998886653
|
It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B .... |
| >KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.06 E-value=3.1e-09 Score=89.98 Aligned_cols=189 Identities=16% Similarity=0.163 Sum_probs=119.3
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh---cCC--CcEEeecCCCCHHHHHHHhc-------Ccc
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGT--YVESMAGDASNKKFLKTALR-------GVR 164 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~~~--~v~~v~~D~~d~~~~~~~~~-------~~d 164 (305)
+.+..+||||+.+||++|++.|++.|++|.+.+++...+++. ++. +-..+.+|+++.++++..++ ..+
T Consensus 13 ~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~~g~ps 92 (256)
T KOG1200|consen 13 MSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKSLGTPS 92 (256)
T ss_pred hcceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHHhcCCCc
Confidence 458999999999999999999999999999998886654332 232 56678999999877766554 358
Q ss_pred EEEECCc----ch----------------------Hhhhh-h---hcC--CCEEEEEcccccccCCCCcccccchH--HH
Q 021928 165 SIICPSE----GF----------------------ISNAG-S---LKG--VQHVILLSQLSVYRGSGGIQALMKGN--AR 210 (305)
Q Consensus 165 ~Vi~~~~----g~----------------------~~~~a-~---~~g--v~~~V~iSS~~~~~~~~~~~~~~~~~--~~ 210 (305)
++++|++ ++ ...++ + ..+ --.||.+||.-......+-..|...+ ..
T Consensus 93 vlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVGkiGN~GQtnYAAsK~GvI 172 (256)
T KOG1200|consen 93 VLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVGKIGNFGQTNYAASKGGVI 172 (256)
T ss_pred EEEEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhhcccccccchhhhhhcCcee
Confidence 8887744 11 01111 1 122 22899999985544433333333321 11
Q ss_pred HHHHHHHHHHHhCCCCEEEEecCCcccCCCCCccee----eecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEEEEec
Q 021928 211 KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQ----FEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVN 284 (305)
Q Consensus 211 ~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~~~~~----~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~v~~ 284 (305)
.+.+.+.+.+...+|++..+-||++...-....+.. +-...+..-.=..||||..+..+..+.. -.+.++++++
T Consensus 173 gftktaArEla~knIrvN~VlPGFI~tpMT~~mp~~v~~ki~~~iPmgr~G~~EevA~~V~fLAS~~ssYiTG~t~evtG 252 (256)
T KOG1200|consen 173 GFTKTAARELARKNIRVNVVLPGFIATPMTEAMPPKVLDKILGMIPMGRLGEAEEVANLVLFLASDASSYITGTTLEVTG 252 (256)
T ss_pred eeeHHHHHHHhhcCceEeEeccccccChhhhhcCHHHHHHHHccCCccccCCHHHHHHHHHHHhccccccccceeEEEec
Confidence 122344566788999999999999653322110000 0001111222356999999998885433 2578999987
Q ss_pred C
Q 021928 285 G 285 (305)
Q Consensus 285 g 285 (305)
|
T Consensus 253 G 253 (256)
T KOG1200|consen 253 G 253 (256)
T ss_pred c
Confidence 6
|
|
| >KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.05 E-value=3.7e-09 Score=97.71 Aligned_cols=180 Identities=16% Similarity=0.081 Sum_probs=109.7
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh--------cCCCcEEeecCCCCHHHHHHHhc-----
Q 021928 95 PEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES--------FGTYVESMAGDASNKKFLKTALR----- 161 (305)
Q Consensus 95 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~--------~~~~v~~v~~D~~d~~~~~~~~~----- 161 (305)
+..+++++|||||.+||.+++++|+.+|.+|+..+|+.++..+. ....+.++++|+++.+++++..+
T Consensus 32 ~~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~~ 111 (314)
T KOG1208|consen 32 DLSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKKK 111 (314)
T ss_pred cCCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHHhc
Confidence 45669999999999999999999999999999999998553221 12467889999999988876554
Q ss_pred --CccEEEECCc-----------ch-----------------HhhhhhhcCCCEEEEEccccccc-----CCCCccc--c
Q 021928 162 --GVRSIICPSE-----------GF-----------------ISNAGSLKGVQHVILLSQLSVYR-----GSGGIQA--L 204 (305)
Q Consensus 162 --~~d~Vi~~~~-----------g~-----------------~~~~a~~~gv~~~V~iSS~~~~~-----~~~~~~~--~ 204 (305)
..|++|+++| |+ +.+..+.....|||++||..... .-.+... |
T Consensus 112 ~~~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~~~~~~~~~~l~~~~~~~~ 191 (314)
T KOG1208|consen 112 EGPLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSILGGGKIDLKDLSGEKAKLY 191 (314)
T ss_pred CCCccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCccccCccchhhccchhccCc
Confidence 4588887643 10 23345555447999999865411 0000111 2
Q ss_pred cc---hHHHHHH--HHHHHHHHh--CCCCEEEEecCCcccC-CCCCcceeee-cCCCCCC-ccCHHHHHHHHHHHhhCCC
Q 021928 205 MK---GNARKLA--EQDESMLMA--SGIPYTIIRTGVLQNT-PGGKQGFQFE-EGCAANG-SLSKEDAAFICVEALESIP 274 (305)
Q Consensus 205 ~~---~~~~~~~--~~aE~~l~~--~gi~~tilRPg~l~~~-~~~~~~~~~~-~~~~~~~-~Is~~DvA~~iv~~l~~~~ 274 (305)
.. |...+.. .-+.++.+. .++....+.||.+... .......... ....... +-+.++-|+.++.++.+|+
T Consensus 192 ~~~~~Y~~SKla~~l~~~eL~k~l~~~V~~~~~hPG~v~t~~l~r~~~~~~~l~~~l~~~~~ks~~~ga~t~~~~a~~p~ 271 (314)
T KOG1208|consen 192 SSDAAYALSKLANVLLANELAKRLKKGVTTYSVHPGVVKTTGLSRVNLLLRLLAKKLSWPLTKSPEQGAATTCYAALSPE 271 (314)
T ss_pred cchhHHHHhHHHHHHHHHHHHHHhhcCceEEEECCCcccccceecchHHHHHHHHHHHHHhccCHHHHhhheehhccCcc
Confidence 21 1111111 011112221 2899999999996544 3321100000 0000011 1367888899998888875
|
|
| >PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B | Back alignment and domain information |
|---|
Probab=99.05 E-value=8.3e-10 Score=98.01 Aligned_cols=179 Identities=15% Similarity=0.139 Sum_probs=115.2
Q ss_pred cCC--ChHHHHHHHHHHhCCCeEEEEEcCcchh----hhhcC-CCcEEeecCCCCHHHHHHH-------h-cCccEEEEC
Q 021928 105 DGD--SDIGQMVILSLIVKRTRIKALVKDKRNA----MESFG-TYVESMAGDASNKKFLKTA-------L-RGVRSIICP 169 (305)
Q Consensus 105 Gat--G~iG~~l~~~L~~~g~~V~~~~R~~~~~----~~~~~-~~v~~v~~D~~d~~~~~~~-------~-~~~d~Vi~~ 169 (305)
|++ ++||++++++|++.|++|+++.|+.++. .+... ...+++.+|++|.++++++ + ..+|++|++
T Consensus 1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~g~iD~lV~~ 80 (241)
T PF13561_consen 1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYGAEVIQCDLSDEESVEALFDEAVERFGGRIDILVNN 80 (241)
T ss_dssp STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTTSEEEESCTTSHHHHHHHHHHHHHHHCSSESEEEEE
T ss_pred CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcCCceEeecCcchHHHHHHHHHHHhhcCCCeEEEEec
Confidence 566 9999999999999999999999998762 11111 1355799999998877765 4 567999976
Q ss_pred C---cc-----h--------------------------HhhhhhhcCCCEEEEEcccccccCCCCcccccchHH--HHHH
Q 021928 170 S---EG-----F--------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA--RKLA 213 (305)
Q Consensus 170 ~---~g-----~--------------------------~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~--~~~~ 213 (305)
+ .. . .....++. ..+|++||.....+.+....|...++ ..+.
T Consensus 81 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--gsii~iss~~~~~~~~~~~~y~~sKaal~~l~ 158 (241)
T PF13561_consen 81 AGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKG--GSIINISSIAAQRPMPGYSAYSASKAALEGLT 158 (241)
T ss_dssp EESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHE--EEEEEEEEGGGTSBSTTTHHHHHHHHHHHHHH
T ss_pred ccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhC--CCcccccchhhcccCccchhhHHHHHHHHHHH
Confidence 2 11 0 00111222 58999999887766555544443321 2222
Q ss_pred HHHHHHHHh-CCCCEEEEecCCcccCCCC----Ccce--eeecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEEEEec
Q 021928 214 EQDESMLMA-SGIPYTIIRTGVLQNTPGG----KQGF--QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVN 284 (305)
Q Consensus 214 ~~aE~~l~~-~gi~~tilRPg~l~~~~~~----~~~~--~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~v~~ 284 (305)
+..-..+.. .+|++..|.||++...... .+.. ......+......++|||.+++.++.+.. -.|+++.|.+
T Consensus 159 r~lA~el~~~~gIrVN~V~pG~i~t~~~~~~~~~~~~~~~~~~~~pl~r~~~~~evA~~v~fL~s~~a~~itG~~i~vDG 238 (241)
T PF13561_consen 159 RSLAKELAPKKGIRVNAVSPGPIETPMTERIPGNEEFLEELKKRIPLGRLGTPEEVANAVLFLASDAASYITGQVIPVDG 238 (241)
T ss_dssp HHHHHHHGGHGTEEEEEEEESSBSSHHHHHHHTHHHHHHHHHHHSTTSSHBEHHHHHHHHHHHHSGGGTTGTSEEEEEST
T ss_pred HHHHHHhccccCeeeeeecccceeccchhccccccchhhhhhhhhccCCCcCHHHHHHHHHHHhCccccCccCCeEEECC
Confidence 333334556 8999999999996533210 0000 00011122334689999999999997653 4688988887
Q ss_pred C
Q 021928 285 G 285 (305)
Q Consensus 285 g 285 (305)
|
T Consensus 239 G 239 (241)
T PF13561_consen 239 G 239 (241)
T ss_dssp T
T ss_pred C
Confidence 6
|
... |
| >COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.04 E-value=1.1e-08 Score=91.24 Aligned_cols=198 Identities=14% Similarity=0.056 Sum_probs=130.2
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh----h------cCCCcEEeecCCCCHHHHHHHhcCc--c
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME----S------FGTYVESMAGDASNKKFLKTALRGV--R 164 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~----~------~~~~v~~v~~D~~d~~~~~~~~~~~--d 164 (305)
++|+.||||-||+-|+.|++.|+++||.|.++.|..+.... + -..++..+.+|++|...+..+++.+ |
T Consensus 1 ~~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v~Pd 80 (345)
T COG1089 1 MGKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEVQPD 80 (345)
T ss_pred CCceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHhcCch
Confidence 36899999999999999999999999999999988544111 1 1135789999999999999999865 7
Q ss_pred EEEECCcc----------------------hHhhhhhhcCC--CEEEEEccccccc-----C---CCCcccccchHHHHH
Q 021928 165 SIICPSEG----------------------FISNAGSLKGV--QHVILLSQLSVYR-----G---SGGIQALMKGNARKL 212 (305)
Q Consensus 165 ~Vi~~~~g----------------------~~~~~a~~~gv--~~~V~iSS~~~~~-----~---~~~~~~~~~~~~~~~ 212 (305)
-|++.++. .+.++++..+. -||...||.--++ + ..+..+-.+|...
T Consensus 81 EIYNLaAQS~V~vSFe~P~~T~~~~~iGtlrlLEaiR~~~~~~~rfYQAStSE~fG~v~~~pq~E~TPFyPrSPYAvA-- 158 (345)
T COG1089 81 EIYNLAAQSHVGVSFEQPEYTADVDAIGTLRLLEAIRILGEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVA-- 158 (345)
T ss_pred hheeccccccccccccCcceeeeechhHHHHHHHHHHHhCCcccEEEecccHHhhcCcccCccccCCCCCCCCHHHHH--
Confidence 88876321 15566666553 4788888865544 1 1222233333221
Q ss_pred HHHHH----HHHHhCCCCEEEEecCCcccC--C--------------------CCCcceeeecCCCCCCccCHHHHHHHH
Q 021928 213 AEQDE----SMLMASGIPYTIIRTGVLQNT--P--------------------GGKQGFQFEEGCAANGSLSKEDAAFIC 266 (305)
Q Consensus 213 ~~~aE----~~l~~~gi~~tilRPg~l~~~--~--------------------~~~~~~~~~~~~~~~~~Is~~DvA~~i 266 (305)
|..+- .|-...|+-.+ -|.+.+. + +..+.+.+++-+....|=+..|-++++
T Consensus 159 KlYa~W~tvNYResYgl~Ac---nGILFNHESP~Rge~FVTRKIt~ava~Ik~G~q~~l~lGNldAkRDWG~A~DYVe~m 235 (345)
T COG1089 159 KLYAYWITVNYRESYGLFAC---NGILFNHESPLRGETFVTRKITRAVARIKLGLQDKLYLGNLDAKRDWGHAKDYVEAM 235 (345)
T ss_pred HHHHHheeeehHhhcCceee---cceeecCCCCCCccceehHHHHHHHHHHHccccceEEeccccccccccchHHHHHHH
Confidence 21111 12122343222 1112211 1 112234445666778899999999999
Q ss_pred HHHhhCCCCCCcEEEEecCCc-CHHHHHHHHHHhhh
Q 021928 267 VEALESIPQTGLIFEVVNGEE-KVSDWKKCFSRLME 301 (305)
Q Consensus 267 v~~l~~~~~~~~~~~v~~g~~-s~~d~~~~~~~l~~ 301 (305)
...|.++. ...|.++.|++ ++++++++..+.+|
T Consensus 236 wlmLQq~~--PddyViATg~t~sVrefv~~Af~~~g 269 (345)
T COG1089 236 WLMLQQEE--PDDYVIATGETHSVREFVELAFEMVG 269 (345)
T ss_pred HHHHccCC--CCceEEecCceeeHHHHHHHHHHHcC
Confidence 99997665 46799998885 89999998777666
|
|
| >PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases | Back alignment and domain information |
|---|
Probab=99.03 E-value=1.2e-09 Score=90.98 Aligned_cols=109 Identities=20% Similarity=0.279 Sum_probs=79.5
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCC-CeEEEEEcC--cchhhh------hcCCCcEEeecCCCCHHHHHHHhc-------C
Q 021928 99 DAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKD--KRNAME------SFGTYVESMAGDASNKKFLKTALR-------G 162 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~R~--~~~~~~------~~~~~v~~v~~D~~d~~~~~~~~~-------~ 162 (305)
|+++||||+++||++++++|+++| ..|+++.|+ .+...+ ....++.++++|+++.++++.+++ .
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP 80 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 689999999999999999999996 578888888 332221 123678999999999888876664 5
Q ss_pred ccEEEECCcch--------------------------HhhhhhhcCCCEEEEEcccccccCCCCcccccch
Q 021928 163 VRSIICPSEGF--------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKG 207 (305)
Q Consensus 163 ~d~Vi~~~~g~--------------------------~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~ 207 (305)
+|++|++++.. +..++...+-.+||++||.....+.+....|...
T Consensus 81 ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~as 151 (167)
T PF00106_consen 81 LDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLPQGGGKIVNISSIAGVRGSPGMSAYSAS 151 (167)
T ss_dssp ESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHTTEEEEEEEEGGGTSSSTTBHHHHHH
T ss_pred ccccccccccccccccccccchhhhhccccccceeeeeeehheeccccceEEecchhhccCCCCChhHHHH
Confidence 69999874310 1111222456799999999988877766666543
|
As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A .... |
| >PRK08309 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.02 E-value=6.7e-09 Score=88.45 Aligned_cols=146 Identities=13% Similarity=0.084 Sum_probs=102.6
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh---c--CCCcEEeecCCCCHHHHHHHhc-------CccEE
Q 021928 99 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---F--GTYVESMAGDASNKKFLKTALR-------GVRSI 166 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~--~~~v~~v~~D~~d~~~~~~~~~-------~~d~V 166 (305)
|+++||||+|++|. ++++|+++|++|+++.|++++.... . ...+.++.+|+.|.+++.++++ .+|.+
T Consensus 1 m~vlVtGGtG~gg~-la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id~l 79 (177)
T PRK08309 1 MHALVIGGTGMLKR-VSLWLCEKGFHVSVIARREVKLENVKRESTTPESITPLPLDYHDDDALKLAIKSTIEKNGPFDLA 79 (177)
T ss_pred CEEEEECcCHHHHH-HHHHHHHCcCEEEEEECCHHHHHHHHHHhhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCeEE
Confidence 57999999987765 9999999999999999987654322 1 2367888999999988887775 34777
Q ss_pred EEC----CcchHhhhhhhcCCC----EEEEEcccccccCCCCcccccchHHHHHHHHHHHHHHhCCCCEEEEecCCcccC
Q 021928 167 ICP----SEGFISNAGSLKGVQ----HVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMASGIPYTIIRTGVLQNT 238 (305)
Q Consensus 167 i~~----~~g~~~~~a~~~gv~----~~V~iSS~~~~~~~~~~~~~~~~~~~~~~~~aE~~l~~~gi~~tilRPg~l~~~ 238 (305)
|.. .+..+..+|++.|++ +||++=...+..+ .. .. ..+......|-=|.-|+..++
T Consensus 80 v~~vh~~~~~~~~~~~~~~gv~~~~~~~~h~~gs~~~~~------~~---------~~-~~~~~~~~~~~~i~lgf~~~~ 143 (177)
T PRK08309 80 VAWIHSSAKDALSVVCRELDGSSETYRLFHVLGSAASDP------RI---------PS-EKIGPARCSYRRVILGFVLED 143 (177)
T ss_pred EEeccccchhhHHHHHHHHccCCCCceEEEEeCCcCCch------hh---------hh-hhhhhcCCceEEEEEeEEEeC
Confidence 754 456788999999999 9998843322211 00 00 222335556666666654322
Q ss_pred CCCCcceeeecCCCCCCccCHHHHHHHHHHHhhCCC
Q 021928 239 PGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIP 274 (305)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~ 274 (305)
...-|.+-+.+++.++.+++.+.
T Consensus 144 -------------~~~rwlt~~ei~~gv~~~~~~~~ 166 (177)
T PRK08309 144 -------------TYSRWLTHEEISDGVIKAIESDA 166 (177)
T ss_pred -------------CccccCchHHHHHHHHHHHhcCC
Confidence 22357899999999999997654
|
|
| >KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.99 E-value=1.3e-08 Score=92.07 Aligned_cols=169 Identities=11% Similarity=0.015 Sum_probs=113.4
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh-------hcCCCcEEeecCCCCH----HHHHHHhcCcc
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME-------SFGTYVESMAGDASNK----KFLKTALRGVR 164 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~-------~~~~~v~~v~~D~~d~----~~~~~~~~~~d 164 (305)
..+.+.+|||||.+||++.+++|+++|++|++++|+++++.. ..+..+.++..|+++. +.+.+.+.+.|
T Consensus 47 ~~g~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~~~ 126 (312)
T KOG1014|consen 47 KLGSWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAGLD 126 (312)
T ss_pred hcCCEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHhcCCc
Confidence 345999999999999999999999999999999999988432 2335688999999864 45777777776
Q ss_pred EEE--ECCc------chH--------h------------------hhhhhcCCCEEEEEcccccccCCCCcccccchHH-
Q 021928 165 SII--CPSE------GFI--------S------------------NAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA- 209 (305)
Q Consensus 165 ~Vi--~~~~------g~~--------~------------------~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~- 209 (305)
+=| ++.+ ..+ . .-+.+.+-.-||.+||...-.+.+....|..++.
T Consensus 127 VgILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G~IvnigS~ag~~p~p~~s~ysasK~~ 206 (312)
T KOG1014|consen 127 VGILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERKKGIIVNIGSFAGLIPTPLLSVYSASKAF 206 (312)
T ss_pred eEEEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCCCceEEEeccccccccChhHHHHHHHHHH
Confidence 555 3322 110 0 0122344557999999887777666666654432
Q ss_pred -HHHHHHHHHHHHhCCCCEEEEecCCcccCCCCCcceeeecCCCCCCccCHHHHHHHHHHHhh
Q 021928 210 -RKLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALE 271 (305)
Q Consensus 210 -~~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~~~~~~~~~~~~~~~Is~~DvA~~iv~~l~ 271 (305)
..+........+..|+.+-.+-|..+.......+ .......+.+..|+-.+..+.
T Consensus 207 v~~~S~~L~~Ey~~~gI~Vq~v~p~~VaTkm~~~~-------~~sl~~ps~~tfaksal~tiG 262 (312)
T KOG1014|consen 207 VDFFSRCLQKEYESKGIFVQSVIPYLVATKMAKYR-------KPSLFVPSPETFAKSALNTIG 262 (312)
T ss_pred HHHHHHHHHHHHHhcCeEEEEeehhheeccccccC-------CCCCcCcCHHHHHHHHHhhcC
Confidence 2223334455667899999999988654433222 122344566777777776665
|
|
| >KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only] | Back alignment and domain information |
|---|
Probab=98.97 E-value=3.8e-09 Score=91.47 Aligned_cols=188 Identities=18% Similarity=0.171 Sum_probs=125.5
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhh------hhcC-CCcEEeecCCCCHHHHHHHhc-------C
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM------ESFG-TYVESMAGDASNKKFLKTALR-------G 162 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~------~~~~-~~v~~v~~D~~d~~~~~~~~~-------~ 162 (305)
.+|.++|||+.|+||.+++++|+++|..+.++..+.+..+ +..+ ..+.++++|+++..+++++++ .
T Consensus 4 tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~fg~ 83 (261)
T KOG4169|consen 4 TGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENPEAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILATFGT 83 (261)
T ss_pred cCceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCHHHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHHHhCc
Confidence 4699999999999999999999999998888877665522 1222 478899999999888888776 3
Q ss_pred ccEEEECCcch----------------------Hhhhh-hh-cC-CCEEEEEcccccccCCCCcccccchHHH--HH--H
Q 021928 163 VRSIICPSEGF----------------------ISNAG-SL-KG-VQHVILLSQLSVYRGSGGIQALMKGNAR--KL--A 213 (305)
Q Consensus 163 ~d~Vi~~~~g~----------------------~~~~a-~~-~g-v~~~V~iSS~~~~~~~~~~~~~~~~~~~--~~--~ 213 (305)
+|++|+.++=. ..+.. ++ .| -.-+|.+||...-.|.+....|..+++. .+ .
T Consensus 84 iDIlINgAGi~~dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL~P~p~~pVY~AsKaGVvgFTRS 163 (261)
T KOG4169|consen 84 IDILINGAGILDDKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGLDPMPVFPVYAASKAGVVGFTRS 163 (261)
T ss_pred eEEEEcccccccchhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccccccCccccchhhhhcccceeeeehh
Confidence 58888764310 11122 12 22 2368899998877776665556544310 01 1
Q ss_pred HHHHHHHHhCCCCEEEEecCCcc----cCCCCCcceeeecCC------CCCCccCHHHHHHHHHHHhhCCCCCCcEEEEe
Q 021928 214 EQDESMLMASGIPYTIIRTGVLQ----NTPGGKQGFQFEEGC------AANGSLSKEDAAFICVEALESIPQTGLIFEVV 283 (305)
Q Consensus 214 ~~aE~~l~~~gi~~tilRPg~l~----~~~~~~~~~~~~~~~------~~~~~Is~~DvA~~iv~~l~~~~~~~~~~~v~ 283 (305)
.+.+.+++++|+....+.||... ...... ...+...+ ......+..++|..++.+++. ..++.+|-+.
T Consensus 164 la~~ayy~~sGV~~~avCPG~t~t~l~~~~~~~-~~~~e~~~~~~~~l~~~~~q~~~~~a~~~v~aiE~-~~NGaiw~v~ 241 (261)
T KOG4169|consen 164 LADLAYYQRSGVRFNAVCPGFTRTDLAENIDAS-GGYLEYSDSIKEALERAPKQSPACCAINIVNAIEY-PKNGAIWKVD 241 (261)
T ss_pred hhhhhhHhhcCEEEEEECCCcchHHHHHHHHhc-CCcccccHHHHHHHHHcccCCHHHHHHHHHHHHhh-ccCCcEEEEe
Confidence 22357889999999999999842 111110 11111111 113356789999999999997 4567888888
Q ss_pred cCC
Q 021928 284 NGE 286 (305)
Q Consensus 284 ~g~ 286 (305)
.+.
T Consensus 242 ~g~ 244 (261)
T KOG4169|consen 242 SGS 244 (261)
T ss_pred cCc
Confidence 765
|
|
| >KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only] | Back alignment and domain information |
|---|
Probab=98.95 E-value=2.5e-08 Score=90.37 Aligned_cols=143 Identities=17% Similarity=0.178 Sum_probs=104.4
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh---c-CCCcEEeecCCCCHHHHHHHhc---------C
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---F-GTYVESMAGDASNKKFLKTALR---------G 162 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~-~~~v~~v~~D~~d~~~~~~~~~---------~ 162 (305)
...|.|+|||+..+.|..+|++|.++|++|.+-+-.++.++.+ . .++...++.|++++++++++.+ +
T Consensus 27 ~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~s~rl~t~~LDVT~~esi~~a~~~V~~~l~~~g 106 (322)
T KOG1610|consen 27 LSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETKSPRLRTLQLDVTKPESVKEAAQWVKKHLGEDG 106 (322)
T ss_pred cCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhcCCcceeEeeccCCHHHHHHHHHHHHHhccccc
Confidence 3568999999999999999999999999999998776554332 2 4678899999999999988875 3
Q ss_pred ccEEEECCc--ch-----------------------------HhhhhhhcCCCEEEEEcccccccCCCCcccccchHH--
Q 021928 163 VRSIICPSE--GF-----------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA-- 209 (305)
Q Consensus 163 ~d~Vi~~~~--g~-----------------------------~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~-- 209 (305)
.=.||+++| +. +..+.+++. .|+|++||.....+.+...+|..+++
T Consensus 107 LwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~ar-GRvVnvsS~~GR~~~p~~g~Y~~SK~aV 185 (322)
T KOG1610|consen 107 LWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRAR-GRVVNVSSVLGRVALPALGPYCVSKFAV 185 (322)
T ss_pred ceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhcc-CeEEEecccccCccCcccccchhhHHHH
Confidence 346676643 00 111233333 59999999988766666667766543
Q ss_pred HHHHHHHHHHHHhCCCCEEEEecCCcccCC
Q 021928 210 RKLAEQDESMLMASGIPYTIIRTGVLQNTP 239 (305)
Q Consensus 210 ~~~~~~aE~~l~~~gi~~tilRPg~l~~~~ 239 (305)
..+.+.....++..|+.+.+|-||.+..+.
T Consensus 186 eaf~D~lR~EL~~fGV~VsiiePG~f~T~l 215 (322)
T KOG1610|consen 186 EAFSDSLRRELRPFGVKVSIIEPGFFKTNL 215 (322)
T ss_pred HHHHHHHHHHHHhcCcEEEEeccCcccccc
Confidence 334444455677789999999999865443
|
|
| >COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only] | Back alignment and domain information |
|---|
Probab=98.90 E-value=4.7e-08 Score=86.86 Aligned_cols=140 Identities=16% Similarity=0.204 Sum_probs=91.4
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcch-----hhhhcC----CCcEEeecCCCC-HHHHHHHhc----
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-----AMESFG----TYVESMAGDASN-KKFLKTALR---- 161 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~-----~~~~~~----~~v~~v~~D~~d-~~~~~~~~~---- 161 (305)
..+++|+||||+++||+++++.|+++|++|+++.|+.+. ..+... ..+.+...|+++ .++++.+++
T Consensus 3 ~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~~~~~ 82 (251)
T COG1028 3 LSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDDEESVEALVAAAEE 82 (251)
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHHHHHHHH
Confidence 356999999999999999999999999999988887543 222222 357778899998 777665543
Q ss_pred ---CccEEEECCcc-----hH----------------------hhhh-hhcCCCEEEEEcccccccCCCCc-ccccchHH
Q 021928 162 ---GVRSIICPSEG-----FI----------------------SNAG-SLKGVQHVILLSQLSVYRGSGGI-QALMKGNA 209 (305)
Q Consensus 162 ---~~d~Vi~~~~g-----~~----------------------~~~a-~~~gv~~~V~iSS~~~~~~~~~~-~~~~~~~~ 209 (305)
.+|++|++++. .+ ..++ ....-++||.+||.... ..... ..|..++.
T Consensus 83 ~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~Iv~isS~~~~-~~~~~~~~Y~~sK~ 161 (251)
T COG1028 83 EFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKKQRIVNISSVAGL-GGPPGQAAYAASKA 161 (251)
T ss_pred HcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhhCeEEEECCchhc-CCCCCcchHHHHHH
Confidence 47977776331 10 0000 00001199999999877 54443 45554432
Q ss_pred --HHHHHHHHHHHHhCCCCEEEEecCCcc
Q 021928 210 --RKLAEQDESMLMASGIPYTIIRTGVLQ 236 (305)
Q Consensus 210 --~~~~~~aE~~l~~~gi~~tilRPg~l~ 236 (305)
..+.+.....+...++.++.+.||.+.
T Consensus 162 al~~~~~~l~~e~~~~gi~v~~v~PG~~~ 190 (251)
T COG1028 162 ALIGLTKALALELAPRGIRVNAVAPGYID 190 (251)
T ss_pred HHHHHHHHHHHHHhhhCcEEEEEEeccCC
Confidence 222222334455678999999999643
|
|
| >KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=98.90 E-value=2.3e-08 Score=83.27 Aligned_cols=189 Identities=16% Similarity=0.112 Sum_probs=120.3
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcC---CCcEEeecCCCCHHHHHHHhcCc---cEEEECC
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG---TYVESMAGDASNKKFLKTALRGV---RSIICPS 170 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~---~~v~~v~~D~~d~~~~~~~~~~~---d~Vi~~~ 170 (305)
.++.|+||||.-+||++++++|++.|.+|+++.|++.....+.. .-++.+.+|+.+-+.+.+++..+ |.+++.+
T Consensus 6 aG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e~p~~I~Pi~~Dls~wea~~~~l~~v~pidgLVNNA 85 (245)
T KOG1207|consen 6 AGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKETPSLIIPIVGDLSAWEALFKLLVPVFPIDGLVNNA 85 (245)
T ss_pred cceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhhCCcceeeeEecccHHHHHHHhhcccCchhhhhccc
Confidence 45999999999999999999999999999999999988665532 34889999999988888887653 6666543
Q ss_pred cc-------h-------------------Hhh-----hhhhcCCCEEEEEcccccccCCCCcccccchHHHHH--HHHHH
Q 021928 171 EG-------F-------------------ISN-----AGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKL--AEQDE 217 (305)
Q Consensus 171 ~g-------~-------------------~~~-----~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~~~--~~~aE 217 (305)
+- . +.. +..+..-..||.+||.+..++-..-..|...++.-. .+...
T Consensus 86 gvA~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~~GaIVNvSSqas~R~~~nHtvYcatKaALDmlTk~lA 165 (245)
T KOG1207|consen 86 GVATNHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQIKGAIVNVSSQASIRPLDNHTVYCATKAALDMLTKCLA 165 (245)
T ss_pred hhhhcchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccCCceEEEecchhcccccCCceEEeecHHHHHHHHHHHH
Confidence 20 0 000 111222345999999988877666556655433111 11111
Q ss_pred HHHHhCCCCEEEEecCCcccCCCC---Cccee---eecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEEEEecC
Q 021928 218 SMLMASGIPYTIIRTGVLQNTPGG---KQGFQ---FEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVNG 285 (305)
Q Consensus 218 ~~l~~~gi~~tilRPg~l~~~~~~---~~~~~---~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~v~~g 285 (305)
..|-...|++..+.|..++..-+. ..+.. .-...+...+..++.|..++..+|.+.. ..|.++-+-+|
T Consensus 166 lELGp~kIRVNsVNPTVVmT~MG~dnWSDP~K~k~mL~riPl~rFaEV~eVVnA~lfLLSd~ssmttGstlpveGG 241 (245)
T KOG1207|consen 166 LELGPQKIRVNSVNPTVVMTDMGRDNWSDPDKKKKMLDRIPLKRFAEVDEVVNAVLFLLSDNSSMTTGSTLPVEGG 241 (245)
T ss_pred HhhCcceeEeeccCCeEEEecccccccCCchhccchhhhCchhhhhHHHHHHhhheeeeecCcCcccCceeeecCC
Confidence 223346788888888874433221 11100 0011122345567999999999987655 34555555543
|
|
| >PRK06300 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.87 E-value=1.2e-07 Score=87.29 Aligned_cols=188 Identities=12% Similarity=0.066 Sum_probs=102.8
Q ss_pred CCCCEEEEEcCC--ChHHHHHHHHHHhCCCeEEEEEcCc---------chh--hhh---c-C---------------CCc
Q 021928 96 EARDAVLVTDGD--SDIGQMVILSLIVKRTRIKALVKDK---------RNA--MES---F-G---------------TYV 143 (305)
Q Consensus 96 ~~~~~vlVtGat--G~iG~~l~~~L~~~g~~V~~~~R~~---------~~~--~~~---~-~---------------~~v 143 (305)
..+|+++||||+ .+||++++++|+++|++|++..|.+ +.. ... . + ...
T Consensus 6 ~~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~~~~ 85 (299)
T PRK06300 6 LTGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWVPIYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMDASFDTP 85 (299)
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEeccchhhhhhhhcccccccccccccccchhhhhhHHHhhhhcCCC
Confidence 356999999995 8999999999999999999976431 000 000 0 0 011
Q ss_pred EEeecCCCC--------HHHHHH-------HhcCccEEEECCc------chH--------------------------hh
Q 021928 144 ESMAGDASN--------KKFLKT-------ALRGVRSIICPSE------GFI--------------------------SN 176 (305)
Q Consensus 144 ~~v~~D~~d--------~~~~~~-------~~~~~d~Vi~~~~------g~~--------------------------~~ 176 (305)
+-+..|+.+ .+++++ .+..+|++|++++ ..+ ..
T Consensus 86 ~~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~~a~~p 165 (299)
T PRK06300 86 EDVPEEIRENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLLSHFGP 165 (299)
T ss_pred EEeecccCccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 222222222 012333 2345899998742 100 01
Q ss_pred hhhhcCCCEEEEEcccccccCCCCcc-cccchHH--HHHHHHHHHHHHh-CCCCEEEEecCCcccCCCCC----cce--e
Q 021928 177 AGSLKGVQHVILLSQLSVYRGSGGIQ-ALMKGNA--RKLAEQDESMLMA-SGIPYTIIRTGVLQNTPGGK----QGF--Q 246 (305)
Q Consensus 177 ~a~~~gv~~~V~iSS~~~~~~~~~~~-~~~~~~~--~~~~~~aE~~l~~-~gi~~tilRPg~l~~~~~~~----~~~--~ 246 (305)
..++. .++|.+||.....+.+... .|..++. ..+.+.....+.. .|+.++.|.||++....... ... .
T Consensus 166 ~m~~~--G~ii~iss~~~~~~~p~~~~~Y~asKaAl~~lt~~la~el~~~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~~ 243 (299)
T PRK06300 166 IMNPG--GSTISLTYLASMRAVPGYGGGMSSAKAALESDTKVLAWEAGRRWGIRVNTISAGPLASRAGKAIGFIERMVDY 243 (299)
T ss_pred HhhcC--CeEEEEeehhhcCcCCCccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEEeCCccChhhhcccccHHHHHH
Confidence 12222 4799998876655433322 3433221 1111222223334 48999999999864322110 000 0
Q ss_pred eecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEEEEecC
Q 021928 247 FEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVNG 285 (305)
Q Consensus 247 ~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~v~~g 285 (305)
.............+|+|.++++++.... ..++++.+.+|
T Consensus 244 ~~~~~p~~r~~~peevA~~v~~L~s~~~~~itG~~i~vdGG 284 (299)
T PRK06300 244 YQDWAPLPEPMEAEQVGAAAAFLVSPLASAITGETLYVDHG 284 (299)
T ss_pred HHhcCCCCCCcCHHHHHHHHHHHhCccccCCCCCEEEECCC
Confidence 0000112335688999999999987533 45788888765
|
|
| >COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.87 E-value=3.7e-08 Score=84.16 Aligned_cols=142 Identities=9% Similarity=0.095 Sum_probs=98.2
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhc--CCCcEEeecCCCCHHHHHHHhc-------CccEEE
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF--GTYVESMAGDASNKKFLKTALR-------GVRSII 167 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~--~~~v~~v~~D~~d~~~~~~~~~-------~~d~Vi 167 (305)
.+.+||||||+.+||.++++++.+.|.+|++..|+++...+.. .+.+....+|+.|.+++++.++ ..+++|
T Consensus 4 tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P~lNvli 83 (245)
T COG3967 4 TGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAENPEIHTEVCDVADRDSRRELVEWLKKEYPNLNVLI 83 (245)
T ss_pred cCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcCcchheeeecccchhhHHHHHHHHHhhCCchheee
Confidence 4589999999999999999999999999999999988765443 2468889999999887665553 458888
Q ss_pred ECCcc-----------hHh---------------------hhhhhcCCCEEEEEcccccccCCCCcccccchH--HHHHH
Q 021928 168 CPSEG-----------FIS---------------------NAGSLKGVQHVILLSQLSVYRGSGGIQALMKGN--ARKLA 213 (305)
Q Consensus 168 ~~~~g-----------~~~---------------------~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~--~~~~~ 213 (305)
+++|= .+. .-..+..-..+|.+||--+..|-.....|...+ .+.+.
T Consensus 84 NNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~a~IInVSSGLafvPm~~~PvYcaTKAaiHsyt 163 (245)
T COG3967 84 NNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPEATIINVSSGLAFVPMASTPVYCATKAAIHSYT 163 (245)
T ss_pred ecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCCCceEEEeccccccCcccccccchhhHHHHHHHH
Confidence 77440 000 001223344799999876665533333343333 33344
Q ss_pred HHHHHHHHhCCCCEEEEecCCcccC
Q 021928 214 EQDESMLMASGIPYTIIRTGVLQNT 238 (305)
Q Consensus 214 ~~aE~~l~~~gi~~tilRPg~l~~~ 238 (305)
....+.++..+++++=+-|..+...
T Consensus 164 ~aLR~Qlk~t~veVIE~~PP~V~t~ 188 (245)
T COG3967 164 LALREQLKDTSVEVIELAPPLVDTT 188 (245)
T ss_pred HHHHHHhhhcceEEEEecCCceecC
Confidence 4555667777899988888776544
|
|
| >PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.79 E-value=9.8e-08 Score=84.84 Aligned_cols=167 Identities=10% Similarity=0.040 Sum_probs=100.2
Q ss_pred HHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhc----CccEEEECCcch----------------
Q 021928 114 VILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR----GVRSIICPSEGF---------------- 173 (305)
Q Consensus 114 l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~----~~d~Vi~~~~g~---------------- 173 (305)
++++|+++|++|++++|++++.. ..+++.+|++|.+++.++++ ++|++||+++..
T Consensus 1 ~a~~l~~~G~~Vv~~~r~~~~~~-----~~~~~~~Dl~~~~~v~~~~~~~~~~iD~li~nAG~~~~~~~~~~~~vN~~~~ 75 (241)
T PRK12428 1 TARLLRFLGARVIGVDRREPGMT-----LDGFIQADLGDPASIDAAVAALPGRIDALFNIAGVPGTAPVELVARVNFLGL 75 (241)
T ss_pred ChHHHHhCCCEEEEEeCCcchhh-----hhHhhcccCCCHHHHHHHHHHhcCCCeEEEECCCCCCCCCHHHhhhhchHHH
Confidence 47899999999999999876532 24678999999999888776 579999885410
Q ss_pred --Hhhhhhh--cCCCEEEEEcccccccC---------------------------CCCcccccchHH--HHHHHHHH-HH
Q 021928 174 --ISNAGSL--KGVQHVILLSQLSVYRG---------------------------SGGIQALMKGNA--RKLAEQDE-SM 219 (305)
Q Consensus 174 --~~~~a~~--~gv~~~V~iSS~~~~~~---------------------------~~~~~~~~~~~~--~~~~~~aE-~~ 219 (305)
+..++.. ..-.+||++||..++.. ..+...|..++. ..+.+... ..
T Consensus 76 ~~l~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~e 155 (241)
T PRK12428 76 RHLTEALLPRMAPGGAIVNVASLAGAEWPQRLELHKALAATASFDEGAAWLAAHPVALATGYQLSKEALILWTMRQAQPW 155 (241)
T ss_pred HHHHHHHHHhccCCcEEEEeCcHHhhccccchHHHHhhhccchHHHHHHhhhccCCCcccHHHHHHHHHHHHHHHHHHHh
Confidence 1111211 12269999999987631 111222322221 11111112 33
Q ss_pred HHhCCCCEEEEecCCcccCCCCC-cc----eeee-cCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEEEEecC
Q 021928 220 LMASGIPYTIIRTGVLQNTPGGK-QG----FQFE-EGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVNG 285 (305)
Q Consensus 220 l~~~gi~~tilRPg~l~~~~~~~-~~----~~~~-~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~v~~g 285 (305)
+...++.++.|+||++....... .. .... .........+++|+|++++.++..+. ..++.+.+.+|
T Consensus 156 ~~~~girvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~va~~~~~l~s~~~~~~~G~~i~vdgg 229 (241)
T PRK12428 156 FGARGIRVNCVAPGPVFTPILGDFRSMLGQERVDSDAKRMGRPATADEQAAVLVFLCSDAARWINGVNLPVDGG 229 (241)
T ss_pred hhccCeEEEEeecCCccCcccccchhhhhhHhhhhcccccCCCCCHHHHHHHHHHHcChhhcCccCcEEEecCc
Confidence 45578999999999864332110 00 0000 00111234688999999999886433 35677777655
|
|
| >KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=98.75 E-value=5.4e-08 Score=83.63 Aligned_cols=142 Identities=13% Similarity=-0.015 Sum_probs=94.8
Q ss_pred CCCEEEEEcCC-ChHHHHHHHHHHhCCCeEEEEEcCcchhhhhc-CCCcEEeecCCCCHHHHHHHhcC--------ccEE
Q 021928 97 ARDAVLVTDGD-SDIGQMVILSLIVKRTRIKALVKDKRNAMESF-GTYVESMAGDASNKKFLKTALRG--------VRSI 166 (305)
Q Consensus 97 ~~~~vlVtGat-G~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-~~~v~~v~~D~~d~~~~~~~~~~--------~d~V 166 (305)
..+.|||||++ |+||.++++.+.+.|+.|++..|+-+...++. ..++.....|+++++.+.+.... .|.+
T Consensus 6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~~~~Gkld~L 85 (289)
T KOG1209|consen 6 QPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRANPDGKLDLL 85 (289)
T ss_pred CCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhhCCCCceEEE
Confidence 45889998865 89999999999999999999999988765543 34689999999999888765542 4788
Q ss_pred EECCcch---------Hh--------------hhhhh------cCCCEEEEEcccccccCCCCcccccchHHHHHH--HH
Q 021928 167 ICPSEGF---------IS--------------NAGSL------KGVQHVILLSQLSVYRGSGGIQALMKGNARKLA--EQ 215 (305)
Q Consensus 167 i~~~~g~---------~~--------------~~a~~------~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~~~~--~~ 215 (305)
++.++.. +. ..++. ..-..||++.|..++-+-+.-..|..+++.-.+ +-
T Consensus 86 ~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaKGtIVnvgSl~~~vpfpf~~iYsAsKAAihay~~t 165 (289)
T KOG1209|consen 86 YNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIVNVGSLAGVVPFPFGSIYSASKAAIHAYART 165 (289)
T ss_pred EcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHccceEEEecceeEEeccchhhhhhHHHHHHHHhhhh
Confidence 8664311 00 00110 123489999999887665544555544332111 11
Q ss_pred HHHHHHhCCCCEEEEecCCcccC
Q 021928 216 DESMLMASGIPYTIIRTGVLQNT 238 (305)
Q Consensus 216 aE~~l~~~gi~~tilRPg~l~~~ 238 (305)
....|+.-|++++-+-||.+..+
T Consensus 166 LrlEl~PFgv~Vin~itGGv~T~ 188 (289)
T KOG1209|consen 166 LRLELKPFGVRVINAITGGVATD 188 (289)
T ss_pred cEEeeeccccEEEEecccceecc
Confidence 11123346888888888886543
|
|
| >COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.67 E-value=1.1e-07 Score=89.74 Aligned_cols=86 Identities=21% Similarity=0.268 Sum_probs=73.9
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCC-CeEEEEEcCcchhhhh---cCCCcEEeecCCCCHHHHHHHhcCccEEEECCcch
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALRGVRSIICPSEGF 173 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~R~~~~~~~~---~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~g~ 173 (305)
||+|+|.|| |+||+.+++.|++.| .+|.+.+|+.++..+. ...+++.++.|+.|.+++.+++++.|+||++.+.+
T Consensus 1 m~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d~~al~~li~~~d~VIn~~p~~ 79 (389)
T COG1748 1 MMKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAADVDALVALIKDFDLVINAAPPF 79 (389)
T ss_pred CCcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccChHHHHHHHhcCCEEEEeCCch
Confidence 589999999 999999999999999 8999999998775433 23479999999999999999999999999996654
Q ss_pred ----HhhhhhhcCCC
Q 021928 174 ----ISNAGSLKGVQ 184 (305)
Q Consensus 174 ----~~~~a~~~gv~ 184 (305)
+.++|.+.|+.
T Consensus 80 ~~~~i~ka~i~~gv~ 94 (389)
T COG1748 80 VDLTILKACIKTGVD 94 (389)
T ss_pred hhHHHHHHHHHhCCC
Confidence 56677777774
|
|
| >TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA | Back alignment and domain information |
|---|
Probab=98.64 E-value=4.5e-07 Score=102.82 Aligned_cols=139 Identities=15% Similarity=0.166 Sum_probs=93.1
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhC-CCeEEEEEcCcc------------------------------------------
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVK-RTRIKALVKDKR------------------------------------------ 133 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~R~~~------------------------------------------ 133 (305)
.++++|||||+++||.+++++|+++ |.+|+++.|++.
T Consensus 1996 ~g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~~ 2075 (2582)
T TIGR02813 1996 SDDVFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVRP 2075 (2582)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhcccc
Confidence 4689999999999999999999998 699999999820
Q ss_pred -----h------hhhhcCCCcEEeecCCCCHHHHHHHhc------CccEEEECCcch-----------------------
Q 021928 134 -----N------AMESFGTYVESMAGDASNKKFLKTALR------GVRSIICPSEGF----------------------- 173 (305)
Q Consensus 134 -----~------~~~~~~~~v~~v~~D~~d~~~~~~~~~------~~d~Vi~~~~g~----------------------- 173 (305)
. ..+..+..+.++.+|++|.+++.+++. ++|.|||+++..
T Consensus 2076 ~~~~~ei~~~la~l~~~G~~v~y~~~DVtD~~av~~av~~v~~~g~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~~nv~G 2155 (2582)
T TIGR02813 2076 VLSSLEIAQALAAFKAAGASAEYASADVTNSVSVAATVQPLNKTLQITGIIHGAGVLADKHIQDKTLEEFNAVYGTKVDG 2155 (2582)
T ss_pred cchhHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHHHH
Confidence 0 001123467889999999988877664 479999984410
Q ss_pred ---HhhhhhhcCCCEEEEEcccccccCCCCcccccchHHHHHHHHHHHHH-HhCCCCEEEEecCCcc
Q 021928 174 ---ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESML-MASGIPYTIIRTGVLQ 236 (305)
Q Consensus 174 ---~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~~~~~~aE~~l-~~~gi~~tilRPg~l~ 236 (305)
+..++.....++||++||..+..+..+...|...+..-.+ .+..+- +..+++++.|.||.+.
T Consensus 2156 ~~~Ll~al~~~~~~~IV~~SSvag~~G~~gqs~YaaAkaaL~~-la~~la~~~~~irV~sI~wG~wd 2221 (2582)
T TIGR02813 2156 LLSLLAALNAENIKLLALFSSAAGFYGNTGQSDYAMSNDILNK-AALQLKALNPSAKVMSFNWGPWD 2221 (2582)
T ss_pred HHHHHHHHHHhCCCeEEEEechhhcCCCCCcHHHHHHHHHHHH-HHHHHHHHcCCcEEEEEECCeec
Confidence 2223334456789999999876555555555443221111 111111 1246888999999864
|
Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD. |
| >PRK06720 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.54 E-value=5.8e-07 Score=75.95 Aligned_cols=75 Identities=15% Similarity=0.172 Sum_probs=59.5
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh------hcCCCcEEeecCCCCHHHHHHHh-------cCc
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTAL-------RGV 163 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~------~~~~~v~~v~~D~~d~~~~~~~~-------~~~ 163 (305)
.++.++||||+++||++++++|++.|++|+++.|+.+...+ ..+..+.++.+|+++.+++.+++ ..+
T Consensus 15 ~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~G~i 94 (169)
T PRK06720 15 AGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAFSRI 94 (169)
T ss_pred CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 46899999999999999999999999999999988654321 12345678899999988776644 357
Q ss_pred cEEEECCc
Q 021928 164 RSIICPSE 171 (305)
Q Consensus 164 d~Vi~~~~ 171 (305)
|.+|++++
T Consensus 95 DilVnnAG 102 (169)
T PRK06720 95 DMLFQNAG 102 (169)
T ss_pred CEEEECCC
Confidence 88888744
|
|
| >cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase | Back alignment and domain information |
|---|
Probab=98.38 E-value=1.5e-06 Score=74.96 Aligned_cols=74 Identities=16% Similarity=0.199 Sum_probs=61.0
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh---cC--CCcEEeecCCCCHHHHHHHhcCccEEEECC
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FG--TYVESMAGDASNKKFLKTALRGVRSIICPS 170 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~~--~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~ 170 (305)
..++++|+||+|++|+.+++.|++.|++|+++.|+.++..+. +. ....+...|+.+.+++.++++++|+||+++
T Consensus 27 ~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~diVi~at 105 (194)
T cd01078 27 KGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGEGVGAVETSDDAARAAAIKGADVVFAAG 105 (194)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCCHHHHHHHHhcCCEEEECC
Confidence 458999999999999999999999999999999997664322 11 134566778889899999999999999883
|
Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo |
| >PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase | Back alignment and domain information |
|---|
Probab=98.36 E-value=2e-06 Score=81.92 Aligned_cols=87 Identities=22% Similarity=0.297 Sum_probs=67.3
Q ss_pred EEEEcCCChHHHHHHHHHHhCC-C-eEEEEEcCcchhhhh----cCCCcEEeecCCCCHHHHHHHhcCccEEEECCcch-
Q 021928 101 VLVTDGDSDIGQMVILSLIVKR-T-RIKALVKDKRNAMES----FGTYVESMAGDASNKKFLKTALRGVRSIICPSEGF- 173 (305)
Q Consensus 101 vlVtGatG~iG~~l~~~L~~~g-~-~V~~~~R~~~~~~~~----~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~g~- 173 (305)
|+|.|| |++|+.+++.|++.+ + +|++..|+.+++.+. ...+++++..|+.|.+++.++++++|+||++++.+
T Consensus 1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~dvVin~~gp~~ 79 (386)
T PF03435_consen 1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVNDPESLAELLRGCDVVINCAGPFF 79 (386)
T ss_dssp EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTTHHHHHHHHTTSSEEEE-SSGGG
T ss_pred CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCCHHHHHHHHhcCCEEEECCccch
Confidence 799999 999999999999887 4 899999999885544 34589999999999999999999999999986543
Q ss_pred ---HhhhhhhcCCCEEEEE
Q 021928 174 ---ISNAGSLKGVQHVILL 189 (305)
Q Consensus 174 ---~~~~a~~~gv~~~V~i 189 (305)
+.++|.+.|+ ++|-+
T Consensus 80 ~~~v~~~~i~~g~-~yvD~ 97 (386)
T PF03435_consen 80 GEPVARACIEAGV-HYVDT 97 (386)
T ss_dssp HHHHHHHHHHHT--EEEES
T ss_pred hHHHHHHHHHhCC-Ceecc
Confidence 6667777777 45443
|
Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A. |
| >KOG2774 consensus NAD dependent epimerase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.35 E-value=3.2e-05 Score=67.68 Aligned_cols=201 Identities=13% Similarity=0.073 Sum_probs=124.6
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHh-CCCeEEEEEc--CcchhhhhcCCCcEEeecCCCCHHHHHHHhc--CccEEEECC
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIV-KRTRIKALVK--DKRNAMESFGTYVESMAGDASNKKFLKTALR--GVRSIICPS 170 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~-~g~~V~~~~R--~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~--~~d~Vi~~~ 170 (305)
....+|||||+-|.+|..++..|.. .|-+-++++. .+... .+ ..--++-.|+.|...+++.+- .+|-+||-.
T Consensus 42 ~~~PrvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp~~--V~-~~GPyIy~DILD~K~L~eIVVn~RIdWL~HfS 118 (366)
T KOG2774|consen 42 QKAPRVLITGSLGQLGRGLASLLRYMYGSECVILSDIVKPPAN--VT-DVGPYIYLDILDQKSLEEIVVNKRIDWLVHFS 118 (366)
T ss_pred CCCCeEEEecchHHHhHHHHHHHHHHhCCccEehhhccCCchh--hc-ccCCchhhhhhccccHHHhhcccccceeeeHH
Confidence 3458999999999999999998885 4654333332 22211 11 112355677777777777664 356666541
Q ss_pred ------c---------------chHhhhhhhcCCCEEEEEcccccccCCCCcccc---------cchHHHH-HHHHH-HH
Q 021928 171 ------E---------------GFISNAGSLKGVQHVILLSQLSVYRGSGGIQAL---------MKGNARK-LAEQD-ES 218 (305)
Q Consensus 171 ------~---------------g~~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~---------~~~~~~~-~~~~a-E~ 218 (305)
+ ..+.+.+++.+.+-| .-|+.++.++..+-++. .-|...+ .++.. |.
T Consensus 119 ALLSAvGE~NVpLA~~VNI~GvHNil~vAa~~kL~iF-VPSTIGAFGPtSPRNPTPdltIQRPRTIYGVSKVHAEL~GEy 197 (366)
T KOG2774|consen 119 ALLSAVGETNVPLALQVNIRGVHNILQVAAKHKLKVF-VPSTIGAFGPTSPRNPTPDLTIQRPRTIYGVSKVHAELLGEY 197 (366)
T ss_pred HHHHHhcccCCceeeeecchhhhHHHHHHHHcCeeEe-ecccccccCCCCCCCCCCCeeeecCceeechhHHHHHHHHHH
Confidence 1 125566777777544 46889988764332211 1122222 22223 33
Q ss_pred HHHhCCCCEEEEe-cCCcccCCCC-----------------CcceeeecCCCCCCccCHHHHHHHHHHHhhCCC--CCCc
Q 021928 219 MLMASGIPYTIIR-TGVLQNTPGG-----------------KQGFQFEEGCAANGSLSKEDAAFICVEALESIP--QTGL 278 (305)
Q Consensus 219 ~l~~~gi~~tilR-Pg~l~~~~~~-----------------~~~~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~ 278 (305)
+--.-++++-.+| ||.+...+++ ++...+-.++....++..+|.-+++++++..+. ...+
T Consensus 198 ~~hrFg~dfr~~rfPg~is~~~pgggttdya~A~f~~Al~~gk~tCylrpdtrlpmmy~~dc~~~~~~~~~a~~~~lkrr 277 (366)
T KOG2774|consen 198 FNHRFGVDFRSMRFPGIISATKPGGGTTDYAIAIFYDALQKGKHTCYLRPDTRLPMMYDTDCMASVIQLLAADSQSLKRR 277 (366)
T ss_pred HHhhcCccceecccCcccccCCCCCCcchhHHHHHHHHHHcCCcccccCCCccCceeehHHHHHHHHHHHhCCHHHhhhh
Confidence 3345789988888 5555543321 222222345555677888999999999998665 4678
Q ss_pred EEEEecCCcCHHHHHHHHHHhh
Q 021928 279 IFEVVNGEEKVSDWKKCFSRLM 300 (305)
Q Consensus 279 ~~~v~~g~~s~~d~~~~~~~l~ 300 (305)
+||+++-..+..|+.+.+.+++
T Consensus 278 ~ynvt~~sftpee~~~~~~~~~ 299 (366)
T KOG2774|consen 278 TYNVTGFSFTPEEIADAIRRVM 299 (366)
T ss_pred eeeeceeccCHHHHHHHHHhhC
Confidence 9999987778889888887764
|
|
| >KOG3019 consensus Predicted nucleoside-diphosphate sugar epimerase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.29 E-value=3.6e-06 Score=73.13 Aligned_cols=196 Identities=14% Similarity=0.098 Sum_probs=114.9
Q ss_pred CCCCEEEEEcCCChHHHHHHH-----HHHhCC----CeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEE
Q 021928 96 EARDAVLVTDGDSDIGQMVIL-----SLIVKR----TRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSI 166 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~-----~L~~~g----~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~V 166 (305)
++.+..++-+.+|+|+..|.- ++-+.+ |.|.+++|.+.+... .+-..|..-.- -.|+++
T Consensus 10 ~~sr~a~~~~~~g~i~~nl~~~~~~~H~t~~~~a~~h~vtv~sR~pg~~ri------tw~el~~~Gip------~sc~a~ 77 (315)
T KOG3019|consen 10 GKSRDAVSNWSNGIIRENLGSETSCCHDTNVHSADNHAVTVLSRSPGKARI------TWPELDFPGIP------ISCVAG 77 (315)
T ss_pred CccccCCCCccccchhccccCcccccccCCCCcccccceEEEecCCCCccc------ccchhcCCCCc------eehHHH
Confidence 455677788889999977765 555544 899999999876432 22222221100 011222
Q ss_pred EEC------------Ccc--------------hHhhhhhhcC--CCEEEEEcccccccCCCCcccccch-------HHHH
Q 021928 167 ICP------------SEG--------------FISNAGSLKG--VQHVILLSQLSVYRGSGGIQALMKG-------NARK 211 (305)
Q Consensus 167 i~~------------~~g--------------~~~~~a~~~g--v~~~V~iSS~~~~~~~~~~~~~~~~-------~~~~ 211 (305)
+.+ +++ .+++++..+. .+-+|++|..+.|.++..- .|... ....
T Consensus 78 vna~g~n~l~P~rRWsp~fqkev~gSRi~~t~~la~aI~~aPq~~~~~Vlv~gva~y~pS~s~-eY~e~~~~qgfd~~sr 156 (315)
T KOG3019|consen 78 VNAVGNNALLPIRRWSPEFQKEVKGSRIRVTSKLADAINNAPQEARPTVLVSGVAVYVPSESQ-EYSEKIVHQGFDILSR 156 (315)
T ss_pred HhhhhhhccCchhhcCHHHHHHhhcceeeHHHHHHHHHhcCCCCCCCeEEEEeeEEecccccc-ccccccccCChHHHHH
Confidence 211 111 1444554432 4578999999888753221 11110 0111
Q ss_pred --HHHHHHHHHHhCCCCEEEEecCCcccCCCCC-----------cceeeecCCCCCCccCHHHHHHHHHHHhhCCCCCCc
Q 021928 212 --LAEQDESMLMASGIPYTIIRTGVLQNTPGGK-----------QGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGL 278 (305)
Q Consensus 212 --~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~-----------~~~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~~~~~ 278 (305)
.+.+..........+.++||.|.+.+..++. -+-.++.+.+...|||++|++..+.++|+++...|-
T Consensus 157 L~l~WE~aA~~~~~~~r~~~iR~GvVlG~gGGa~~~M~lpF~~g~GGPlGsG~Q~fpWIHv~DL~~li~~ale~~~v~GV 236 (315)
T KOG3019|consen 157 LCLEWEGAALKANKDVRVALIRIGVVLGKGGGALAMMILPFQMGAGGPLGSGQQWFPWIHVDDLVNLIYEALENPSVKGV 236 (315)
T ss_pred HHHHHHHHhhccCcceeEEEEEEeEEEecCCcchhhhhhhhhhccCCcCCCCCeeeeeeehHHHHHHHHHHHhcCCCCce
Confidence 1111111122356899999999865433211 111124555668899999999999999999887664
Q ss_pred EEEEecCCcCHHHHHHHHHHhhhhcC
Q 021928 279 IFEVVNGEEKVSDWKKCFSRLMEKTG 304 (305)
Q Consensus 279 ~~~v~~g~~s~~d~~~~~~~l~~~~~ 304 (305)
+--+.....+..|+.+.+...++|+.
T Consensus 237 iNgvAP~~~~n~Ef~q~lg~aL~Rp~ 262 (315)
T KOG3019|consen 237 INGVAPNPVRNGEFCQQLGSALSRPS 262 (315)
T ss_pred ecccCCCccchHHHHHHHHHHhCCCc
Confidence 43333344578999999999998874
|
|
| >KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.27 E-value=6.3e-06 Score=72.74 Aligned_cols=74 Identities=18% Similarity=0.163 Sum_probs=57.2
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCC-----CeEEEEEcCcchhhhh-------cC---CCcEEeecCCCCHHHHHHHh-
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKR-----TRIKALVKDKRNAMES-------FG---TYVESMAGDASNKKFLKTAL- 160 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g-----~~V~~~~R~~~~~~~~-------~~---~~v~~v~~D~~d~~~~~~~~- 160 (305)
++|.++|||++.++|.+||.+|++.. .++++.+|+-+++++. ++ .+++++..|+++..++..+.
T Consensus 2 ~RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~ 81 (341)
T KOG1478|consen 2 MRKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASK 81 (341)
T ss_pred CceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHH
Confidence 57899999999999999999999764 3466778998774432 23 37889999999977765554
Q ss_pred ------cCccEEEECC
Q 021928 161 ------RGVRSIICPS 170 (305)
Q Consensus 161 ------~~~d~Vi~~~ 170 (305)
+..|.|+..+
T Consensus 82 di~~rf~~ld~iylNA 97 (341)
T KOG1478|consen 82 DIKQRFQRLDYIYLNA 97 (341)
T ss_pred HHHHHhhhccEEEEcc
Confidence 4569999763
|
|
| >COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.23 E-value=7.5e-06 Score=72.40 Aligned_cols=90 Identities=16% Similarity=0.246 Sum_probs=73.6
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcC--CCcEEeecCCCCHHHHHHH-hcCccEEEECCcch--
Q 021928 99 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG--TYVESMAGDASNKKFLKTA-LRGVRSIICPSEGF-- 173 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~--~~v~~v~~D~~d~~~~~~~-~~~~d~Vi~~~~g~-- 173 (305)
|+++|.|+ |-+|+.+|+.|.+.|++|+++.++++...+... .....+.+|-+|.+.++++ ++++|+++.+.+..
T Consensus 1 m~iiIiG~-G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~~~~~~~v~gd~t~~~~L~~agi~~aD~vva~t~~d~~ 79 (225)
T COG0569 1 MKIIIIGA-GRVGRSVARELSEEGHNVVLIDRDEERVEEFLADELDTHVVIGDATDEDVLEEAGIDDADAVVAATGNDEV 79 (225)
T ss_pred CEEEEECC-cHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhhhcceEEEEecCCCHHHHHhcCCCcCCEEEEeeCCCHH
Confidence 68999998 999999999999999999999999988665333 4688999999999999998 88999999875432
Q ss_pred ---Hhhhh-hhcCCCEEEEE
Q 021928 174 ---ISNAG-SLKGVQHVILL 189 (305)
Q Consensus 174 ---~~~~a-~~~gv~~~V~i 189 (305)
+..++ +..|++++|.-
T Consensus 80 N~i~~~la~~~~gv~~viar 99 (225)
T COG0569 80 NSVLALLALKEFGVPRVIAR 99 (225)
T ss_pred HHHHHHHHHHhcCCCcEEEE
Confidence 23333 44789888754
|
|
| >PTZ00325 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.21 E-value=6.2e-06 Score=76.59 Aligned_cols=100 Identities=14% Similarity=0.063 Sum_probs=70.2
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCC--CeEEEEEcCcchh--hhhcCCCcEEeecCCCCHHHHHHHhcCccEEEECCc
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRNA--MESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE 171 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g--~~V~~~~R~~~~~--~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~ 171 (305)
.++++|+|+||+|.||+.++..|+.++ .++++++++.... .+.......+...+.+|..++.++++++|+||++++
T Consensus 6 ~~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~~~~g~a~Dl~~~~~~~~v~~~td~~~~~~~l~gaDvVVitaG 85 (321)
T PTZ00325 6 LKMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVGAPGVAADLSHIDTPAKVTGYADGELWEKALRGADLVLICAG 85 (321)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecCCCcccccchhhcCcCceEEEecCCCchHHHhCCCCEEEECCC
Confidence 356899999999999999999999666 5899988843221 111111113344566665566789999999998833
Q ss_pred -----c---------------hHhhhhhhcCCCEEEEEcccccc
Q 021928 172 -----G---------------FISNAGSLKGVQHVILLSQLSVY 195 (305)
Q Consensus 172 -----g---------------~~~~~a~~~gv~~~V~iSS~~~~ 195 (305)
+ .+.+++++.+++++|+++|..+.
T Consensus 86 ~~~~~~~tR~dll~~N~~i~~~i~~~i~~~~~~~iviv~SNPvd 129 (321)
T PTZ00325 86 VPRKPGMTRDDLFNTNAPIVRDLVAAVASSAPKAIVGIVSNPVN 129 (321)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcHH
Confidence 1 03345677899999999997654
|
|
| >KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=98.20 E-value=6.7e-06 Score=68.65 Aligned_cols=188 Identities=15% Similarity=0.171 Sum_probs=118.9
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcch---hhhhcCCCcEEeecCCCCHHHHHHHhc-------CccEE
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN---AMESFGTYVESMAGDASNKKFLKTALR-------GVRSI 166 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~---~~~~~~~~v~~v~~D~~d~~~~~~~~~-------~~d~V 166 (305)
++-..+|||+..++|+..+++|+++|..|.+++-..++ ....++.++.+.+.|++...++..++. ..|+.
T Consensus 8 kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vakelg~~~vf~padvtsekdv~aala~ak~kfgrld~~ 87 (260)
T KOG1199|consen 8 KGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKELGGKVVFTPADVTSEKDVRAALAKAKAKFGRLDAL 87 (260)
T ss_pred cCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHhCCceEEeccccCcHHHHHHHHHHHHhhccceeee
Confidence 34678999999999999999999999999999876655 233467789999999999888877764 35888
Q ss_pred EECCcc---h------------Hhhh---------------------h-----hhcCC-CEEEEEcccccccCCCCcccc
Q 021928 167 ICPSEG---F------------ISNA---------------------G-----SLKGV-QHVILLSQLSVYRGSGGIQAL 204 (305)
Q Consensus 167 i~~~~g---~------------~~~~---------------------a-----~~~gv-~~~V~iSS~~~~~~~~~~~~~ 204 (305)
++|++- + +.+. + .+.|- .-+|...|..++..+.+...|
T Consensus 88 vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgviintasvaafdgq~gqaay 167 (260)
T KOG1199|consen 88 VNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTASVAAFDGQTGQAAY 167 (260)
T ss_pred eeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeeceeeeecCccchhhh
Confidence 877430 0 1110 0 01121 135555666666666555555
Q ss_pred cchHHH--HHHHHHHHHHHhCCCCEEEEecCCcccCCCCC-----cceeeecCCCCCCccCHHHHHHHHHHHhhCCCCCC
Q 021928 205 MKGNAR--KLAEQDESMLMASGIPYTIIRTGVLQNTPGGK-----QGFQFEEGCAANGSLSKEDAAFICVEALESIPQTG 277 (305)
Q Consensus 205 ~~~~~~--~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~-----~~~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~~~~ 277 (305)
..++.. ....-..+-+...||++..+-||.+....-.. +.+.-..-..+...=++.+-|+.+...+++|-.++
T Consensus 168 saskgaivgmtlpiardla~~gir~~tiapglf~tpllsslpekv~~fla~~ipfpsrlg~p~eyahlvqaiienp~lng 247 (260)
T KOG1199|consen 168 SASKGAIVGMTLPIARDLAGDGIRFNTIAPGLFDTPLLSSLPEKVKSFLAQLIPFPSRLGHPHEYAHLVQAIIENPYLNG 247 (260)
T ss_pred hcccCceEeeechhhhhcccCceEEEeecccccCChhhhhhhHHHHHHHHHhCCCchhcCChHHHHHHHHHHHhCcccCC
Confidence 543210 00111223355689999999999865332110 10100011111223466888888888999998889
Q ss_pred cEEEEec
Q 021928 278 LIFEVVN 284 (305)
Q Consensus 278 ~~~~v~~ 284 (305)
+++.+.+
T Consensus 248 evir~dg 254 (260)
T KOG1199|consen 248 EVIRFDG 254 (260)
T ss_pred eEEEecc
Confidence 8888764
|
|
| >TIGR00715 precor6x_red precorrin-6x reductase | Back alignment and domain information |
|---|
Probab=98.20 E-value=9.4e-06 Score=73.06 Aligned_cols=90 Identities=14% Similarity=0.103 Sum_probs=67.8
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhc--CccEEEECCcc----
Q 021928 99 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--GVRSIICPSEG---- 172 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~--~~d~Vi~~~~g---- 172 (305)
|+|||+||||. |+.++++|.++|++|++.+++..........+...+..+..|.+.+.+.++ ++|+||.++..
T Consensus 1 m~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~~~~g~~~v~~g~l~~~~l~~~l~~~~i~~VIDAtHPfA~~ 79 (256)
T TIGR00715 1 MTVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLYPIHQALTVHTGALDPQELREFLKRHSIDILVDATHPFAAQ 79 (256)
T ss_pred CeEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCccccccccCCceEEECCCCHHHHHHHHHhcCCCEEEEcCCHHHHH
Confidence 68999999999 999999999999999999998865433222233455566778888888886 48999988443
Q ss_pred ---hHhhhhhhcCCCEEEEE
Q 021928 173 ---FISNAGSLKGVQHVILL 189 (305)
Q Consensus 173 ---~~~~~a~~~gv~~~V~i 189 (305)
....+|++.+++.+=|-
T Consensus 80 is~~a~~a~~~~~ipylR~e 99 (256)
T TIGR00715 80 ITTNATAVCKELGIPYVRFE 99 (256)
T ss_pred HHHHHHHHHHHhCCcEEEEE
Confidence 25567778887766553
|
This enzyme was found to be a monomer by gel filtration. |
| >PRK09620 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.11 E-value=8.2e-06 Score=72.28 Aligned_cols=172 Identities=13% Similarity=0.155 Sum_probs=91.9
Q ss_pred CCEEEEEcCC----------------ChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcC--CCcEEeecCCCCHHHHHHH
Q 021928 98 RDAVLVTDGD----------------SDIGQMVILSLIVKRTRIKALVKDKRNAMESFG--TYVESMAGDASNKKFLKTA 159 (305)
Q Consensus 98 ~~~vlVtGat----------------G~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~--~~v~~v~~D~~d~~~~~~~ 159 (305)
+++||||+|. |++|++++++|+++|++|+++.+.........+ ..+..+..|....+.+.++
T Consensus 3 gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~~~~~~~~~~~~V~s~~d~~~~l~~~ 82 (229)
T PRK09620 3 GKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEKPNDINNQLELHPFEGIIDLQDKMKSI 82 (229)
T ss_pred CCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCcCCCcccCCceeEEEEecHHHHHHHHHHH
Confidence 5899999886 999999999999999999998764321111111 1234455544444677888
Q ss_pred hc--CccEEEECCc--chHh-hhhhh--------cCCC-----EEEEEc------ccccccCCCCcccccch-H--HHHH
Q 021928 160 LR--GVRSIICPSE--GFIS-NAGSL--------KGVQ-----HVILLS------QLSVYRGSGGIQALMKG-N--ARKL 212 (305)
Q Consensus 160 ~~--~~d~Vi~~~~--g~~~-~~a~~--------~gv~-----~~V~iS------S~~~~~~~~~~~~~~~~-~--~~~~ 212 (305)
++ ++|+|||+++ .+.. ..+.. .+++ .+=+.- +.....+......|... . ....
T Consensus 83 ~~~~~~D~VIH~AAvsD~~~~~~~~~~~~~~~~~~Ki~~~~~~~l~L~~~pdIl~~l~~~~~~~~~vGFkaEt~~~~~~l 162 (229)
T PRK09620 83 ITHEKVDAVIMAAAGSDWVVDKICDQEGNVLDMNGKISSDIAPIIHFQKAPKVLKQIKQWDPETVLVGFKLESDVNEEEL 162 (229)
T ss_pred hcccCCCEEEECccccceecccccccccccccccCCCcCCCCCeEEEEECcHHHHHHHhhCCCCEEEEEEeccCCCHHHH
Confidence 84 6899999843 2211 11110 0111 111111 11111111111112110 0 1122
Q ss_pred HHHHHHHHHhCCCCEEEEecCCcccCCCC-CcceeeecCCCCCCccCHHHHHHHHHHHhh
Q 021928 213 AEQDESMLMASGIPYTIIRTGVLQNTPGG-KQGFQFEEGCAANGSLSKEDAAFICVEALE 271 (305)
Q Consensus 213 ~~~aE~~l~~~gi~~tilRPg~l~~~~~~-~~~~~~~~~~~~~~~Is~~DvA~~iv~~l~ 271 (305)
...+...|.+.+.++++...-. ...+. ...+.+..........+..++|+.++..+.
T Consensus 163 ~~~A~~kl~~k~~D~ivaN~~~--~~~g~~~~~~ii~~~~~~~~~~~K~~iA~~i~~~i~ 220 (229)
T PRK09620 163 FERAKNRMEEAKASVMIANSPH--SLYSRGAMHYVIGQDGKGQLCNGKDETAKEIVKRLE 220 (229)
T ss_pred HHHHHHHHHHcCCCEEEECCcc--cccCCCcEEEEEeCCCccccCCCHHHHHHHHHHHHH
Confidence 3456677788999999887531 11111 123333322222345678999999988764
|
|
| >KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.07 E-value=0.00015 Score=64.04 Aligned_cols=197 Identities=14% Similarity=0.128 Sum_probs=113.0
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcch-----hhhh-------cCCCcEEeecCCCCHHHHHHHhcCc-
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-----AMES-------FGTYVESMAGDASNKKFLKTALRGV- 163 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~-----~~~~-------~~~~v~~v~~D~~d~~~~~~~~~~~- 163 (305)
++|..||||-+|.=|+.+++.|+.+||+|..+.|..+. ...+ .+...+.+-+|++|...+.+.+.-+
T Consensus 27 ~rkvALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~~ik 106 (376)
T KOG1372|consen 27 PRKVALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLISTIK 106 (376)
T ss_pred cceEEEEecccCCCchHHHHHHHhCCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHhccC
Confidence 45789999999999999999999999999999987655 1111 1246778889999998888887644
Q ss_pred -cEEEECCc--------------------ch--HhhhhhhcCC---CEEEEEccccccc-----CCCCcccccchHHHH-
Q 021928 164 -RSIICPSE--------------------GF--ISNAGSLKGV---QHVILLSQLSVYR-----GSGGIQALMKGNARK- 211 (305)
Q Consensus 164 -d~Vi~~~~--------------------g~--~~~~a~~~gv---~~~V~iSS~~~~~-----~~~~~~~~~~~~~~~- 211 (305)
+-|++.++ |. +.++.+.-+. -||-..|+.--|+ |+....++.+.....
T Consensus 107 PtEiYnLaAQSHVkvSFdlpeYTAeVdavGtLRlLdAi~~c~l~~~VrfYQAstSElyGkv~e~PQsE~TPFyPRSPYa~ 186 (376)
T KOG1372|consen 107 PTEVYNLAAQSHVKVSFDLPEYTAEVDAVGTLRLLDAIRACRLTEKVRFYQASTSELYGKVQEIPQSETTPFYPRSPYAA 186 (376)
T ss_pred chhhhhhhhhcceEEEeecccceeeccchhhhhHHHHHHhcCcccceeEEecccHhhcccccCCCcccCCCCCCCChhHH
Confidence 34443311 11 4444443222 2676777765554 222222232211111
Q ss_pred HHHHHHHHHHhCCCCEEEEec-CCccc--CCCC------------------Cc--ceeeecCCCCCCccCHHHHHHHHHH
Q 021928 212 LAEQDESMLMASGIPYTIIRT-GVLQN--TPGG------------------KQ--GFQFEEGCAANGSLSKEDAAFICVE 268 (305)
Q Consensus 212 ~~~~aE~~l~~~gi~~tilRP-g~l~~--~~~~------------------~~--~~~~~~~~~~~~~Is~~DvA~~iv~ 268 (305)
.+..+-.++....-.|..+-. |.+.+ .+.. ++ .+.++.-+....|=+..|-++++..
T Consensus 187 aKmy~~WivvNyREAYnmfAcNGILFNHESPRRGenFVTRKItRsvakI~~gqqe~~~LGNL~a~RDWGhA~dYVEAMW~ 266 (376)
T KOG1372|consen 187 AKMYGYWIVVNYREAYNMFACNGILFNHESPRRGENFVTRKITRSVAKISLGQQEKIELGNLSALRDWGHAGDYVEAMWL 266 (376)
T ss_pred hhhhheEEEEEhHHhhcceeeccEeecCCCCccccchhhHHHHHHHHHhhhcceeeEEecchhhhcccchhHHHHHHHHH
Confidence 110010001011111111111 11111 1111 11 1222333455788899999999999
Q ss_pred HhhCCCCCCcEEEEecCCc-CHHHHHHH
Q 021928 269 ALESIPQTGLIFEVVNGEE-KVSDWKKC 295 (305)
Q Consensus 269 ~l~~~~~~~~~~~v~~g~~-s~~d~~~~ 295 (305)
.|.++.. ..|-|..|+. +++++++.
T Consensus 267 mLQ~d~P--dDfViATge~hsVrEF~~~ 292 (376)
T KOG1372|consen 267 MLQQDSP--DDFVIATGEQHSVREFCNL 292 (376)
T ss_pred HHhcCCC--CceEEecCCcccHHHHHHH
Confidence 9976654 3577777774 89998876
|
|
| >PRK06732 phosphopantothenate--cysteine ligase; Validated | Back alignment and domain information |
|---|
Probab=98.06 E-value=1.5e-05 Score=70.61 Aligned_cols=67 Identities=4% Similarity=0.111 Sum_probs=47.6
Q ss_pred EcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCC--HHHHHHHhcCccEEEECCc
Q 021928 104 TDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASN--KKFLKTALRGVRSIICPSE 171 (305)
Q Consensus 104 tGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d--~~~~~~~~~~~d~Vi~~~~ 171 (305)
-.+||++|++++++|+++|++|+++.|...... ....+++++..+-.+ .+.+.+.++++|+|||+++
T Consensus 22 N~SSG~iG~aLA~~L~~~G~~V~li~r~~~~~~-~~~~~v~~i~v~s~~~m~~~l~~~~~~~DivIh~AA 90 (229)
T PRK06732 22 NHSTGQLGKIIAETFLAAGHEVTLVTTKTAVKP-EPHPNLSIIEIENVDDLLETLEPLVKDHDVLIHSMA 90 (229)
T ss_pred CccchHHHHHHHHHHHhCCCEEEEEECcccccC-CCCCCeEEEEEecHHHHHHHHHHHhcCCCEEEeCCc
Confidence 356889999999999999999999987643211 112356666654332 2456677788999999843
|
|
| >PLN00106 malate dehydrogenase | Back alignment and domain information |
|---|
Probab=97.94 E-value=4e-05 Score=71.27 Aligned_cols=99 Identities=15% Similarity=0.131 Sum_probs=68.4
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCC--eEEEEEcCcchh--hhhcCCCcEEeecCCCCHHHHHHHhcCccEEEECCc-
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRT--RIKALVKDKRNA--MESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE- 171 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~R~~~~~--~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~- 171 (305)
.+.+|+|+||+|.||+.++..|+.++. +++++++++... .+...........++.+.+++.++++++|+||++++
T Consensus 17 ~~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~~~g~a~Dl~~~~~~~~i~~~~~~~d~~~~l~~aDiVVitAG~ 96 (323)
T PLN00106 17 PGFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIANTPGVAADVSHINTPAQVRGFLGDDQLGDALKGADLVIIPAGV 96 (323)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCCCCeeEchhhhCCcCceEEEEeCCCCHHHHcCCCCEEEEeCCC
Confidence 347999999999999999999997774 899998876221 111111112233454444567889999999998833
Q ss_pred ----ch---------------HhhhhhhcCCCEEEEEcccccc
Q 021928 172 ----GF---------------ISNAGSLKGVQHVILLSQLSVY 195 (305)
Q Consensus 172 ----g~---------------~~~~a~~~gv~~~V~iSS~~~~ 195 (305)
+. +.+.+++.+.+.+|+++|--+.
T Consensus 97 ~~~~g~~R~dll~~N~~i~~~i~~~i~~~~p~aivivvSNPvD 139 (323)
T PLN00106 97 PRKPGMTRDDLFNINAGIVKTLCEAVAKHCPNALVNIISNPVN 139 (323)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCCcc
Confidence 11 3344667888999999887654
|
|
| >PRK13656 trans-2-enoyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.94 E-value=4.8e-05 Score=71.92 Aligned_cols=71 Identities=18% Similarity=0.253 Sum_probs=54.1
Q ss_pred CCEEEEEcCCChHHHH--HHHHHHhCCCeEEEEEcCcch---------------hh---hhcCCCcEEeecCCCCHHHHH
Q 021928 98 RDAVLVTDGDSDIGQM--VILSLIVKRTRIKALVKDKRN---------------AM---ESFGTYVESMAGDASNKKFLK 157 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~--l~~~L~~~g~~V~~~~R~~~~---------------~~---~~~~~~v~~v~~D~~d~~~~~ 157 (305)
+|++|||||++++|.+ +++.| ..|++|+++.+..+. .. +..+..+..+.+|+++.+++.
T Consensus 41 gK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E~v~ 119 (398)
T PRK13656 41 PKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDEIKQ 119 (398)
T ss_pred CCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHH
Confidence 5999999999999999 89999 999999988753211 11 112334678899999987776
Q ss_pred HHh-------cCccEEEEC
Q 021928 158 TAL-------RGVRSIICP 169 (305)
Q Consensus 158 ~~~-------~~~d~Vi~~ 169 (305)
+++ ..+|.+||+
T Consensus 120 ~lie~I~e~~G~IDiLVnS 138 (398)
T PRK13656 120 KVIELIKQDLGQVDLVVYS 138 (398)
T ss_pred HHHHHHHHhcCCCCEEEEC
Confidence 555 357999988
|
|
| >PRK12548 shikimate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.91 E-value=4e-05 Score=70.34 Aligned_cols=72 Identities=8% Similarity=0.074 Sum_probs=57.4
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCe-EEEEEcCc---chhhhh---c---CCCcEEeecCCCCHHHHHHHhcCccEE
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTR-IKALVKDK---RNAMES---F---GTYVESMAGDASNKKFLKTALRGVRSI 166 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~-V~~~~R~~---~~~~~~---~---~~~v~~v~~D~~d~~~~~~~~~~~d~V 166 (305)
.+++++|+|| |++|++++..|++.|++ |+++.|+. ++..+. + ...+.+...|+.+.+++.+.++.+|.|
T Consensus 125 ~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~Dil 203 (289)
T PRK12548 125 KGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEIASSDIL 203 (289)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhhccCCEE
Confidence 4589999999 89999999999999986 99999986 343221 1 123456678998888888888899999
Q ss_pred EEC
Q 021928 167 ICP 169 (305)
Q Consensus 167 i~~ 169 (305)
|++
T Consensus 204 INa 206 (289)
T PRK12548 204 VNA 206 (289)
T ss_pred EEe
Confidence 988
|
|
| >cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases | Back alignment and domain information |
|---|
Probab=97.91 E-value=2.2e-05 Score=73.16 Aligned_cols=73 Identities=15% Similarity=0.060 Sum_probs=50.5
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCC-------CeEEEEEcCcchhhhhcCCCcE------EeecCCCCHHHHHHHhcCcc
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKR-------TRIKALVKDKRNAMESFGTYVE------SMAGDASNKKFLKTALRGVR 164 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g-------~~V~~~~R~~~~~~~~~~~~v~------~v~~D~~d~~~~~~~~~~~d 164 (305)
+.+|+||||+|+||++++..|+..+ .+|+++++++.... ..+...+ ....|+....++.++++++|
T Consensus 2 ~~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~-~~g~~~Dl~d~~~~~~~~~~~~~~~~~~l~~aD 80 (325)
T cd01336 2 PIRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKA-LEGVVMELQDCAFPLLKSVVATTDPEEAFKDVD 80 (325)
T ss_pred CeEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCcccc-ccceeeehhhccccccCCceecCCHHHHhCCCC
Confidence 4689999999999999999999854 58999998653210 0110111 12234444566778899999
Q ss_pred EEEECCc
Q 021928 165 SIICPSE 171 (305)
Q Consensus 165 ~Vi~~~~ 171 (305)
+|||+++
T Consensus 81 iVI~tAG 87 (325)
T cd01336 81 VAILVGA 87 (325)
T ss_pred EEEEeCC
Confidence 9998843
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PRK14874 aspartate-semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.88 E-value=7e-05 Score=70.14 Aligned_cols=89 Identities=17% Similarity=0.114 Sum_probs=56.9
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCe---EEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEECCcch-
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTR---IKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEGF- 173 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~---V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~g~- 173 (305)
+++|+|.||||++|+++++.|.+++|. ++++.+.........-.+.+....|+.+ . .++++|+||++++..
T Consensus 1 ~~~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~~~g~~l~~~g~~i~v~d~~~-~----~~~~vDvVf~A~g~g~ 75 (334)
T PRK14874 1 GYNVAVVGATGAVGREMLNILEERNFPVDKLRLLASARSAGKELSFKGKELKVEDLTT-F----DFSGVDIALFSAGGSV 75 (334)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEccccCCCeeeeCCceeEEeeCCH-H----HHcCCCEEEECCChHH
Confidence 479999999999999999999998764 4777766433211111123455556653 2 346899999986543
Q ss_pred ---HhhhhhhcCCCEEEEEccc
Q 021928 174 ---ISNAGSLKGVQHVILLSQL 192 (305)
Q Consensus 174 ---~~~~a~~~gv~~~V~iSS~ 192 (305)
......+.|+ .+|=.|+.
T Consensus 76 s~~~~~~~~~~G~-~VIDlS~~ 96 (334)
T PRK14874 76 SKKYAPKAAAAGA-VVIDNSSA 96 (334)
T ss_pred HHHHHHHHHhCCC-EEEECCch
Confidence 2233344565 45555654
|
|
| >PRK09496 trkA potassium transporter peripheral membrane component; Reviewed | Back alignment and domain information |
|---|
Probab=97.87 E-value=8.3e-05 Score=72.15 Aligned_cols=90 Identities=12% Similarity=0.175 Sum_probs=70.0
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcC-CCcEEeecCCCCHHHHHHH-hcCccEEEECCcch---
Q 021928 99 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG-TYVESMAGDASNKKFLKTA-LRGVRSIICPSEGF--- 173 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~-~~v~~v~~D~~d~~~~~~~-~~~~d~Vi~~~~g~--- 173 (305)
|+|+|+|+ |.+|+++++.|.++|++|+++.++++....... .+++++.+|.++.+.+.++ ++++|+|+.+.+..
T Consensus 1 m~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~~~~~~~~~~~~~~~~~gd~~~~~~l~~~~~~~a~~vi~~~~~~~~n 79 (453)
T PRK09496 1 MKIIIVGA-GQVGYTLAENLSGENNDVTVIDTDEERLRRLQDRLDVRTVVGNGSSPDVLREAGAEDADLLIAVTDSDETN 79 (453)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhhcCEEEEEeCCCCHHHHHHcCCCcCCEEEEecCChHHH
Confidence 58999998 999999999999999999999999877554332 4588999999999999888 88999999874422
Q ss_pred --Hhhhhhhc-CCCEEEEE
Q 021928 174 --ISNAGSLK-GVQHVILL 189 (305)
Q Consensus 174 --~~~~a~~~-gv~~~V~i 189 (305)
+...++.. +..++|..
T Consensus 80 ~~~~~~~r~~~~~~~ii~~ 98 (453)
T PRK09496 80 MVACQIAKSLFGAPTTIAR 98 (453)
T ss_pred HHHHHHHHHhcCCCeEEEE
Confidence 23344443 55555543
|
|
| >PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase | Back alignment and domain information |
|---|
Probab=97.87 E-value=4.5e-05 Score=72.58 Aligned_cols=98 Identities=17% Similarity=0.143 Sum_probs=62.0
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhC-CCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHH-HhcCccEEEECCcch-
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVK-RTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKT-ALRGVRSIICPSEGF- 173 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~-~~~~~d~Vi~~~~g~- 173 (305)
++++|.|.||||++|+++++.|.++ ..+|..+.++...-.............|+.+.+.+.. .++++|+||++.+..
T Consensus 37 ~~~kVaIvGATG~vG~eLlrlL~~hP~~el~~l~s~~saG~~i~~~~~~l~~~~~~~~~~~~~~~~~~~DvVf~Alp~~~ 116 (381)
T PLN02968 37 EKKRIFVLGASGYTGAEVRRLLANHPDFEITVMTADRKAGQSFGSVFPHLITQDLPNLVAVKDADFSDVDAVFCCLPHGT 116 (381)
T ss_pred cccEEEEECCCChHHHHHHHHHHhCCCCeEEEEEChhhcCCCchhhCccccCccccceecCCHHHhcCCCEEEEcCCHHH
Confidence 5589999999999999999999988 5799999876433211010111222244433333332 268999999985532
Q ss_pred ---HhhhhhhcCCCEEEEEccccccc
Q 021928 174 ---ISNAGSLKGVQHVILLSQLSVYR 196 (305)
Q Consensus 174 ---~~~~a~~~gv~~~V~iSS~~~~~ 196 (305)
+...+ +.+ .++|-.|+..-..
T Consensus 117 s~~i~~~~-~~g-~~VIDlSs~fRl~ 140 (381)
T PLN02968 117 TQEIIKAL-PKD-LKIVDLSADFRLR 140 (381)
T ss_pred HHHHHHHH-hCC-CEEEEcCchhccC
Confidence 33333 244 5788888876544
|
|
| >KOG2733 consensus Uncharacterized membrane protein [Function unknown] | Back alignment and domain information |
|---|
Probab=97.84 E-value=3.4e-05 Score=71.21 Aligned_cols=73 Identities=14% Similarity=0.215 Sum_probs=61.4
Q ss_pred CCEEEEEcCCChHHHHHHHHHHh----CCCeEEEEEcCcchhhhhc-----------CCCcEEeecCCCCHHHHHHHhcC
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIV----KRTRIKALVKDKRNAMESF-----------GTYVESMAGDASNKKFLKTALRG 162 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~----~g~~V~~~~R~~~~~~~~~-----------~~~v~~v~~D~~d~~~~~~~~~~ 162 (305)
+-.++|.|||||.|..+++.++. .|..+-+..|+++++.+.+ ...+ ++.+|..|++++.+..+.
T Consensus 5 ~yDvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~-i~i~D~~n~~Sl~emak~ 83 (423)
T KOG2733|consen 5 RYDVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSV-ILIADSANEASLDEMAKQ 83 (423)
T ss_pred eeeEEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCCcccce-EEEecCCCHHHHHHHHhh
Confidence 35789999999999999999998 7788888999998854321 2234 889999999999999999
Q ss_pred ccEEEECCc
Q 021928 163 VRSIICPSE 171 (305)
Q Consensus 163 ~d~Vi~~~~ 171 (305)
+.+|++|.+
T Consensus 84 ~~vivN~vG 92 (423)
T KOG2733|consen 84 ARVIVNCVG 92 (423)
T ss_pred hEEEEeccc
Confidence 999998844
|
|
| >PRK14982 acyl-ACP reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.84 E-value=4.4e-05 Score=71.27 Aligned_cols=69 Identities=20% Similarity=0.193 Sum_probs=51.2
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhC-C-CeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEECC
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVK-R-TRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS 170 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~-g-~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~ 170 (305)
..+++|+||||+|+||+.++++|+++ | .+++++.|+.+++.+... ++..+|+ ..+.+++.++|+||+++
T Consensus 153 l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~---el~~~~i---~~l~~~l~~aDiVv~~t 223 (340)
T PRK14982 153 LSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQA---ELGGGKI---LSLEEALPEADIVVWVA 223 (340)
T ss_pred cCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHH---HhccccH---HhHHHHHccCCEEEECC
Confidence 45699999999999999999999864 5 589999998766543221 1112333 34668899999999884
|
|
| >PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus | Back alignment and domain information |
|---|
Probab=97.79 E-value=0.00024 Score=55.59 Aligned_cols=70 Identities=17% Similarity=0.245 Sum_probs=57.2
Q ss_pred EEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHH-HhcCccEEEECCc
Q 021928 101 VLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKT-ALRGVRSIICPSE 171 (305)
Q Consensus 101 vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~-~~~~~d~Vi~~~~ 171 (305)
|+|.|. |.+|+.+++.|.+.+.+|+++.++++........++.++.+|.+|.+.+++ -++.++.++.+.+
T Consensus 1 vvI~G~-g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~a~~vv~~~~ 71 (116)
T PF02254_consen 1 VVIIGY-GRIGREIAEQLKEGGIDVVVIDRDPERVEELREEGVEVIYGDATDPEVLERAGIEKADAVVILTD 71 (116)
T ss_dssp EEEES--SHHHHHHHHHHHHTTSEEEEEESSHHHHHHHHHTTSEEEES-TTSHHHHHHTTGGCESEEEEESS
T ss_pred eEEEcC-CHHHHHHHHHHHhCCCEEEEEECCcHHHHHHHhcccccccccchhhhHHhhcCccccCEEEEccC
Confidence 678887 789999999999977799999999887655555568999999999998876 5578899997754
|
The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A .... |
| >PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated | Back alignment and domain information |
|---|
Probab=97.69 E-value=0.00017 Score=69.06 Aligned_cols=170 Identities=11% Similarity=0.070 Sum_probs=94.8
Q ss_pred CCCCEEEEEcC----------------CChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHH
Q 021928 96 EARDAVLVTDG----------------DSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA 159 (305)
Q Consensus 96 ~~~~~vlVtGa----------------tG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~ 159 (305)
..+++|+|||| +|.+|.+++++|..+|++|+++.++.. .. .+.+ +...|+++.+++.++
T Consensus 186 l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~-~~--~~~~--~~~~dv~~~~~~~~~ 260 (399)
T PRK05579 186 LAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVN-LP--TPAG--VKRIDVESAQEMLDA 260 (399)
T ss_pred cCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCcc-cc--CCCC--cEEEccCCHHHHHHH
Confidence 45699999999 889999999999999999999988753 11 1222 345789987776655
Q ss_pred h----cCccEEEECCc--chHhhhhhhcCCCE------EEEEcc------cccccCCC-CcccccchHHHHHHHHHHHHH
Q 021928 160 L----RGVRSIICPSE--GFISNAGSLKGVQH------VILLSQ------LSVYRGSG-GIQALMKGNARKLAEQDESML 220 (305)
Q Consensus 160 ~----~~~d~Vi~~~~--g~~~~~a~~~gv~~------~V~iSS------~~~~~~~~-~~~~~~~~~~~~~~~~aE~~l 220 (305)
+ ..+|++|++++ .+........++++ +=+.-. .+...+.. ....|... .......+.+-|
T Consensus 261 v~~~~~~~DilI~~Aav~d~~~~~~~~~Kikk~~~~~~l~L~~~pdIl~~l~~~~~~~~~~VGFaaE-t~~~~~~A~~kl 339 (399)
T PRK05579 261 VLAALPQADIFIMAAAVADYRPATVAEGKIKKGEGELTLELVPNPDILAEVAALKDKRPFVVGFAAE-TGDVLEYARAKL 339 (399)
T ss_pred HHHhcCCCCEEEEcccccccccccccccCccCCCCCceEEEEeCcHHHHHHHhccCCCCEEEEEccC-CchHHHHHHHHH
Confidence 5 46899998843 11111111111111 111111 11000110 11122111 011133455667
Q ss_pred HhCCCCEEEEecCCcccCCC--CCcceeeec-CCC-CCCccCHHHHHHHHHHHhh
Q 021928 221 MASGIPYTIIRTGVLQNTPG--GKQGFQFEE-GCA-ANGSLSKEDAAFICVEALE 271 (305)
Q Consensus 221 ~~~gi~~tilRPg~l~~~~~--~~~~~~~~~-~~~-~~~~Is~~DvA~~iv~~l~ 271 (305)
.+.+.++++...=.-..+.+ ..+.+.+.. +.. .....+..++|+.++..+.
T Consensus 340 ~~k~~D~ivaN~i~~~~~fg~~~n~~~ii~~~~~~~~~~~~~K~~iA~~i~~~i~ 394 (399)
T PRK05579 340 KRKGLDLIVANDVSAGGGFGSDDNEVTLIWSDGGEVKLPLMSKLELARRLLDEIA 394 (399)
T ss_pred HHcCCeEEEEecCCcCCCcCCCceEEEEEECCCcEEEcCCCCHHHHHHHHHHHHH
Confidence 88999999887532111111 223334422 221 2456688999999998763
|
|
| >PRK05086 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.62 E-value=0.00032 Score=65.05 Aligned_cols=92 Identities=14% Similarity=0.085 Sum_probs=59.4
Q ss_pred CEEEEEcCCChHHHHHHHHHHh---CCCeEEEEEcCcchh---hhhcC-CCcEEeecCCCCHHHHHHHhcCccEEEECCc
Q 021928 99 DAVLVTDGDSDIGQMVILSLIV---KRTRIKALVKDKRNA---MESFG-TYVESMAGDASNKKFLKTALRGVRSIICPSE 171 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~~---~g~~V~~~~R~~~~~---~~~~~-~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~ 171 (305)
|+|+|+||+|.||++++..|.. .++++++++|++... .+... .....+.+ .+.+++.+.++++|+||.+++
T Consensus 1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~~~g~alDl~~~~~~~~i~~--~~~~d~~~~l~~~DiVIitaG 78 (312)
T PRK05086 1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPVTPGVAVDLSHIPTAVKIKG--FSGEDPTPALEGADVVLISAG 78 (312)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCCCcceehhhhcCCCCceEEE--eCCCCHHHHcCCCCEEEEcCC
Confidence 6899999999999999998854 346788888774321 11111 11122333 122345677899999998843
Q ss_pred -----c---------------hHhhhhhhcCCCEEEEEccc
Q 021928 172 -----G---------------FISNAGSLKGVQHVILLSQL 192 (305)
Q Consensus 172 -----g---------------~~~~~a~~~gv~~~V~iSS~ 192 (305)
+ .+.+.+++.+.+++|.+.|-
T Consensus 79 ~~~~~~~~R~dll~~N~~i~~~ii~~i~~~~~~~ivivvsN 119 (312)
T PRK05086 79 VARKPGMDRSDLFNVNAGIVKNLVEKVAKTCPKACIGIITN 119 (312)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccC
Confidence 1 02334566788888888764
|
|
| >PRK04148 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.56 E-value=0.00046 Score=55.83 Aligned_cols=88 Identities=10% Similarity=0.020 Sum_probs=70.3
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEECCc-----
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE----- 171 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~----- 171 (305)
+.++|++.|. | -|.+++..|.+.|++|++++.++..........+.++..|+++++ -+..+++|.|+..-+
T Consensus 16 ~~~kileIG~-G-fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~~~~~~~v~dDlf~p~--~~~y~~a~liysirpp~el~ 91 (134)
T PRK04148 16 KNKKIVELGI-G-FYFKVAKKLKESGFDVIVIDINEKAVEKAKKLGLNAFVDDLFNPN--LEIYKNAKLIYSIRPPRDLQ 91 (134)
T ss_pred cCCEEEEEEe-c-CCHHHHHHHHHCCCEEEEEECCHHHHHHHHHhCCeEEECcCCCCC--HHHHhcCCEEEEeCCCHHHH
Confidence 4488999997 5 789999999999999999999987654444446899999999866 366789999998733
Q ss_pred chHhhhhhhcCCCEEEE
Q 021928 172 GFISNAGSLKGVQHVIL 188 (305)
Q Consensus 172 g~~~~~a~~~gv~~~V~ 188 (305)
..+.+.+++.++.-+|.
T Consensus 92 ~~~~~la~~~~~~~~i~ 108 (134)
T PRK04148 92 PFILELAKKINVPLIIK 108 (134)
T ss_pred HHHHHHHHHcCCCEEEE
Confidence 34778888888876654
|
|
| >PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase | Back alignment and domain information |
|---|
Probab=97.55 E-value=0.00044 Score=73.12 Aligned_cols=95 Identities=15% Similarity=0.099 Sum_probs=70.2
Q ss_pred CcCCCCEEEEEcCCChHHHHHHHHHHhCC-Ce-------------EEEEEcCcchhhhhcC--CCcEEeecCCCCHHHHH
Q 021928 94 FPEARDAVLVTDGDSDIGQMVILSLIVKR-TR-------------IKALVKDKRNAMESFG--TYVESMAGDASNKKFLK 157 (305)
Q Consensus 94 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g-~~-------------V~~~~R~~~~~~~~~~--~~v~~v~~D~~d~~~~~ 157 (305)
....+++|+|.|| |++|+.+++.|++.. ++ |.+.+++.+.+.+... ++++.+..|+.|.+++.
T Consensus 565 ~~~~~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~~~~~~v~lDv~D~e~L~ 643 (1042)
T PLN02819 565 VTKKSQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGIENAEAVQLDVSDSESLL 643 (1042)
T ss_pred ccccCCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhcCCCceEEeecCCHHHHH
Confidence 3445789999998 999999999998753 33 6667777655443322 25788999999999999
Q ss_pred HHhcCccEEEECCcch----HhhhhhhcCCCEEEEEc
Q 021928 158 TALRGVRSIICPSEGF----ISNAGSLKGVQHVILLS 190 (305)
Q Consensus 158 ~~~~~~d~Vi~~~~g~----~~~~a~~~gv~~~V~iS 190 (305)
++++++|+||.+.+.. ++.+|.++|+ |++-.|
T Consensus 644 ~~v~~~DaVIsalP~~~H~~VAkaAieaGk-Hvv~ek 679 (1042)
T PLN02819 644 KYVSQVDVVISLLPASCHAVVAKACIELKK-HLVTAS 679 (1042)
T ss_pred HhhcCCCEEEECCCchhhHHHHHHHHHcCC-CEEECc
Confidence 9999999999986543 5556666665 554444
|
|
| >PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated | Back alignment and domain information |
|---|
Probab=97.50 E-value=0.00044 Score=65.03 Aligned_cols=93 Identities=13% Similarity=-0.008 Sum_probs=56.9
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhC-CCeEEEEEcCcchh---hhhcCCCcEEe-ecCCCCHHHHHHHhcCccEEEECCc
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVK-RTRIKALVKDKRNA---MESFGTYVESM-AGDASNKKFLKTALRGVRSIICPSE 171 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~R~~~~~---~~~~~~~v~~v-~~D~~d~~~~~~~~~~~d~Vi~~~~ 171 (305)
++++|+|.||||.+|+++++.|.+. +++++++.++.+.. .+..+ .+..+ ..++.+.+.. .+.++|+||++.+
T Consensus 1 ~m~kVaIiGAtG~vG~~l~~~L~~~p~~elv~v~~~~~~g~~l~~~~~-~~~~~~~~~~~~~~~~--~~~~vD~Vf~alP 77 (343)
T PRK00436 1 MMIKVGIVGASGYTGGELLRLLLNHPEVEIVAVTSRSSAGKPLSDVHP-HLRGLVDLVLEPLDPE--ILAGADVVFLALP 77 (343)
T ss_pred CCeEEEEECCCCHHHHHHHHHHHcCCCceEEEEECccccCcchHHhCc-ccccccCceeecCCHH--HhcCCCEEEECCC
Confidence 3589999999999999999999976 57888877643221 11111 11111 2233333322 4578999999855
Q ss_pred ch----HhhhhhhcCCCEEEEEcccc
Q 021928 172 GF----ISNAGSLKGVQHVILLSQLS 193 (305)
Q Consensus 172 g~----~~~~a~~~gv~~~V~iSS~~ 193 (305)
.. +...+.+.| +++|=.|+..
T Consensus 78 ~~~~~~~v~~a~~aG-~~VID~S~~f 102 (343)
T PRK00436 78 HGVSMDLAPQLLEAG-VKVIDLSADF 102 (343)
T ss_pred cHHHHHHHHHHHhCC-CEEEECCccc
Confidence 32 333344455 4677667654
|
|
| >PRK09496 trkA potassium transporter peripheral membrane component; Reviewed | Back alignment and domain information |
|---|
Probab=97.49 E-value=0.00075 Score=65.48 Aligned_cols=95 Identities=19% Similarity=0.227 Sum_probs=72.0
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhc--CCCcEEeecCCCCHHHHHH-HhcCccEEEECCcch
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF--GTYVESMAGDASNKKFLKT-ALRGVRSIICPSEGF 173 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~--~~~v~~v~~D~~d~~~~~~-~~~~~d~Vi~~~~g~ 173 (305)
.+++|+|.|+ |.+|+.+++.|.+.|++|+++.++++...... ..++.++.+|.++.+.+++ .++++|+|+.+.+..
T Consensus 230 ~~~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~~~~~~~~~~~~~~~~~i~gd~~~~~~L~~~~~~~a~~vi~~~~~~ 308 (453)
T PRK09496 230 PVKRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERDPERAEELAEELPNTLVLHGDGTDQELLEEEGIDEADAFIALTNDD 308 (453)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHCCCCeEEECCCCCHHHHHhcCCccCCEEEECCCCc
Confidence 4689999998 99999999999999999999999987643322 2357899999999988854 557889998774422
Q ss_pred -----HhhhhhhcCCCEEEEEccc
Q 021928 174 -----ISNAGSLKGVQHVILLSQL 192 (305)
Q Consensus 174 -----~~~~a~~~gv~~~V~iSS~ 192 (305)
....+++.++.++|.....
T Consensus 309 ~~n~~~~~~~~~~~~~~ii~~~~~ 332 (453)
T PRK09496 309 EANILSSLLAKRLGAKKVIALVNR 332 (453)
T ss_pred HHHHHHHHHHHHhCCCeEEEEECC
Confidence 2334566777777665443
|
|
| >KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=97.48 E-value=0.0003 Score=61.39 Aligned_cols=178 Identities=15% Similarity=0.110 Sum_probs=97.7
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEE--EEcCcchhhh---hcCCCcEEeecCCCCHHHHHHHhc-------Cc
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKA--LVKDKRNAME---SFGTYVESMAGDASNKKFLKTALR-------GV 163 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~--~~R~~~~~~~---~~~~~v~~v~~D~~d~~~~~~~~~-------~~ 163 (305)
.+++.+||||++.+||..++..+.+.+-+... ..|....... ..++......+|+.+...+.+..+ .-
T Consensus 4 ~~r~villTGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~~~~L~v~~gd~~v~~~g~~~e~~~l~al~e~~r~k~gkr 83 (253)
T KOG1204|consen 4 NMRKVILLTGASRGIGTGSVATILAEDDEALRYGVARLLAELEGLKVAYGDDFVHVVGDITEEQLLGALREAPRKKGGKR 83 (253)
T ss_pred ccceEEEEecCCCCccHHHHHHHHhcchHHHHHhhhcccccccceEEEecCCcceechHHHHHHHHHHHHhhhhhcCCce
Confidence 35789999999999999999999988755433 3333221110 111222333444444333333222 23
Q ss_pred cEEEECCc--chH---------------------------h----hhhhhcC-CCEEEEEcccccccCCCCcccccchHH
Q 021928 164 RSIICPSE--GFI---------------------------S----NAGSLKG-VQHVILLSQLSVYRGSGGIQALMKGNA 209 (305)
Q Consensus 164 d~Vi~~~~--g~~---------------------------~----~~a~~~g-v~~~V~iSS~~~~~~~~~~~~~~~~~~ 209 (305)
|.|||++| +.. . ...++.. .+.+|++||..+..+-..+..|...++
T Consensus 84 ~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~~~vVnvSS~aav~p~~~wa~yc~~Ka 163 (253)
T KOG1204|consen 84 DIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVNGNVVNVSSLAAVRPFSSWAAYCSSKA 163 (253)
T ss_pred eEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCccCeEEEecchhhhccccHHHHhhhhHH
Confidence 78888744 100 0 0011221 468999999999888777777766544
Q ss_pred HHHHHHHHHHHHhC-CCCEEEEecCCcccCCCC----Ccce------eeecCCCCCCccCHHHHHHHHHHHhhCC
Q 021928 210 RKLAEQDESMLMAS-GIPYTIIRTGVLQNTPGG----KQGF------QFEEGCAANGSLSKEDAAFICVEALESI 273 (305)
Q Consensus 210 ~~~~~~aE~~l~~~-gi~~tilRPg~l~~~~~~----~~~~------~~~~~~~~~~~Is~~DvA~~iv~~l~~~ 273 (305)
.......--...++ ++.+..++||.+...-.. .... .+..-......++..+-|+.+..++++.
T Consensus 164 Ar~m~f~~lA~EEp~~v~vl~~aPGvvDT~mq~~ir~~~~~~p~~l~~f~el~~~~~ll~~~~~a~~l~~L~e~~ 238 (253)
T KOG1204|consen 164 ARNMYFMVLASEEPFDVRVLNYAPGVVDTQMQVCIRETSRMTPADLKMFKELKESGQLLDPQVTAKVLAKLLEKG 238 (253)
T ss_pred HHHHHHHHHhhcCccceeEEEccCCcccchhHHHHhhccCCCHHHHHHHHHHHhcCCcCChhhHHHHHHHHHHhc
Confidence 32221111112344 778888999986432210 0000 0001112245677788888888888765
|
|
| >PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases | Back alignment and domain information |
|---|
Probab=97.46 E-value=0.00024 Score=57.62 Aligned_cols=70 Identities=20% Similarity=0.251 Sum_probs=52.1
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCCe-EEEEEcCcchhhhh---cC-CCcEEeecCCCCHHHHHHHhcCccEEEEC
Q 021928 95 PEARDAVLVTDGDSDIGQMVILSLIVKRTR-IKALVKDKRNAMES---FG-TYVESMAGDASNKKFLKTALRGVRSIICP 169 (305)
Q Consensus 95 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~-V~~~~R~~~~~~~~---~~-~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~ 169 (305)
+...++++|.|| |+.|+.++..|.+.|.+ |+++.|+.+++.+. ++ ..+.++. + +.+.+.+..+|+||++
T Consensus 9 ~l~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~--~---~~~~~~~~~~DivI~a 82 (135)
T PF01488_consen 9 DLKGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIP--L---EDLEEALQEADIVINA 82 (135)
T ss_dssp TGTTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEE--G---GGHCHHHHTESEEEE-
T ss_pred CcCCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceee--H---HHHHHHHhhCCeEEEe
Confidence 345699999998 99999999999999985 99999998875443 32 2234433 3 3344778899999988
Q ss_pred C
Q 021928 170 S 170 (305)
Q Consensus 170 ~ 170 (305)
+
T Consensus 83 T 83 (135)
T PF01488_consen 83 T 83 (135)
T ss_dssp S
T ss_pred c
Confidence 3
|
Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C .... |
| >PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional | Back alignment and domain information |
|---|
Probab=97.46 E-value=0.0011 Score=62.07 Aligned_cols=92 Identities=15% Similarity=0.219 Sum_probs=64.7
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcc---------------------hhh------hhcCC--CcEEe
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKR---------------------NAM------ESFGT--YVESM 146 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~---------------------~~~------~~~~~--~v~~v 146 (305)
..++|+|.|+ |++|+++++.|+..|. ++++++++.- |.. ....+ .++.+
T Consensus 23 ~~~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v~i~~~ 101 (338)
T PRK12475 23 REKHVLIVGA-GALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEVEIVPV 101 (338)
T ss_pred cCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCcEEEEE
Confidence 4589999997 8899999999999997 7888877631 100 01122 45566
Q ss_pred ecCCCCHHHHHHHhcCccEEEECCcch-----HhhhhhhcCCCEEEEEcc
Q 021928 147 AGDASNKKFLKTALRGVRSIICPSEGF-----ISNAGSLKGVQHVILLSQ 191 (305)
Q Consensus 147 ~~D~~d~~~~~~~~~~~d~Vi~~~~g~-----~~~~a~~~gv~~~V~iSS 191 (305)
..|++ .+.+.++++++|+||.+...+ +.+++.+.+++. |+.+.
T Consensus 102 ~~~~~-~~~~~~~~~~~DlVid~~D~~~~r~~in~~~~~~~ip~-i~~~~ 149 (338)
T PRK12475 102 VTDVT-VEELEELVKEVDLIIDATDNFDTRLLINDLSQKYNIPW-IYGGC 149 (338)
T ss_pred eccCC-HHHHHHHhcCCCEEEEcCCCHHHHHHHHHHHHHcCCCE-EEEEe
Confidence 67775 467888899999999885543 456677778764 44443
|
|
| >PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.45 E-value=0.00038 Score=65.17 Aligned_cols=91 Identities=13% Similarity=0.080 Sum_probs=53.6
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEE--EEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEECCcch--
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKA--LVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEGF-- 173 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~--~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~g~-- 173 (305)
+++|+|+||||++|+++++.|.+++|.+.- ..++.+++-+.+...- ...++.+.+.. .++++|.||++.+..
T Consensus 4 ~~~IaIvGATG~vG~eLlrlL~~~~hP~~~l~~v~s~~~aG~~l~~~~--~~l~~~~~~~~--~~~~vD~vFla~p~~~s 79 (336)
T PRK05671 4 PLDIAVVGATGTVGEALVQILEERDFPVGTLHLLASSESAGHSVPFAG--KNLRVREVDSF--DFSQVQLAFFAAGAAVS 79 (336)
T ss_pred CCEEEEEccCCHHHHHHHHHHhhCCCCceEEEEEECcccCCCeeccCC--cceEEeeCChH--HhcCCCEEEEcCCHHHH
Confidence 479999999999999999999988764433 2333333221111100 12333322221 157899999985532
Q ss_pred --HhhhhhhcCCCEEEEEcccc
Q 021928 174 --ISNAGSLKGVQHVILLSQLS 193 (305)
Q Consensus 174 --~~~~a~~~gv~~~V~iSS~~ 193 (305)
+...+.+.|+ ++|=.|+..
T Consensus 80 ~~~v~~~~~~G~-~VIDlS~~f 100 (336)
T PRK05671 80 RSFAEKARAAGC-SVIDLSGAL 100 (336)
T ss_pred HHHHHHHHHCCC-eEEECchhh
Confidence 4444556676 455556543
|
|
| >PRK10669 putative cation:proton antiport protein; Provisional | Back alignment and domain information |
|---|
Probab=97.39 E-value=0.00086 Score=67.14 Aligned_cols=73 Identities=14% Similarity=0.199 Sum_probs=61.8
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHH-hcCccEEEECC
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA-LRGVRSIICPS 170 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~-~~~~d~Vi~~~ 170 (305)
...+|+|.|+ |.+|++++++|.++|++|+++++++++..+....+..++.+|.+|++.++++ ++.+|+++.+.
T Consensus 416 ~~~hiiI~G~-G~~G~~la~~L~~~g~~vvvId~d~~~~~~~~~~g~~~i~GD~~~~~~L~~a~i~~a~~viv~~ 489 (558)
T PRK10669 416 ICNHALLVGY-GRVGSLLGEKLLAAGIPLVVIETSRTRVDELRERGIRAVLGNAANEEIMQLAHLDCARWLLLTI 489 (558)
T ss_pred cCCCEEEECC-ChHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCCeEEEcCCCCHHHHHhcCccccCEEEEEc
Confidence 3579999997 9999999999999999999999998876555455789999999999888764 46789888763
|
|
| >TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms) | Back alignment and domain information |
|---|
Probab=97.39 E-value=0.00062 Score=63.88 Aligned_cols=86 Identities=16% Similarity=0.158 Sum_probs=53.2
Q ss_pred EEEEEcCCChHHHHHHHHHHhCCCeEE---EEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEECCcch---
Q 021928 100 AVLVTDGDSDIGQMVILSLIVKRTRIK---ALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEGF--- 173 (305)
Q Consensus 100 ~vlVtGatG~iG~~l~~~L~~~g~~V~---~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~g~--- 173 (305)
+|+|.||||++|+++++.|.+++|.++ .+.+.........-.+.+.+..|+. ...+.++|+||.+++..
T Consensus 1 ~VaIvGAtG~vG~eLi~lL~~~~hp~~~l~~~as~~~~g~~~~~~~~~~~~~~~~-----~~~~~~~D~v~~a~g~~~s~ 75 (339)
T TIGR01296 1 NVAIVGATGAVGQEMLKILEERNFPIDKLVLLASDRSAGRKVTFKGKELEVNEAK-----IESFEGIDIALFSAGGSVSK 75 (339)
T ss_pred CEEEEcCCCHHHHHHHHHHHhCCCChhhEEEEeccccCCCeeeeCCeeEEEEeCC-----hHHhcCCCEEEECCCHHHHH
Confidence 589999999999999999999887654 3335432211111112456666664 12357999999986543
Q ss_pred -HhhhhhhcCCCEEEEEcc
Q 021928 174 -ISNAGSLKGVQHVILLSQ 191 (305)
Q Consensus 174 -~~~~a~~~gv~~~V~iSS 191 (305)
......+.|+ ++|=.|+
T Consensus 76 ~~a~~~~~~G~-~VID~ss 93 (339)
T TIGR01296 76 EFAPKAAKCGA-IVIDNTS 93 (339)
T ss_pred HHHHHHHHCCC-EEEECCH
Confidence 2223334565 4554454
|
Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978. |
| >PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate | Back alignment and domain information |
|---|
Probab=97.39 E-value=0.0003 Score=55.85 Aligned_cols=87 Identities=20% Similarity=0.195 Sum_probs=51.4
Q ss_pred EEEEEcCCChHHHHHHHHHHhCC-CeEEEEEcCcc-h---hhhhcC---CCcEEeecCCCCHHHHHHHhcCccEEEECCc
Q 021928 100 AVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKR-N---AMESFG---TYVESMAGDASNKKFLKTALRGVRSIICPSE 171 (305)
Q Consensus 100 ~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~R~~~-~---~~~~~~---~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~ 171 (305)
+|.|.||||++|+++++.|.+.- .+++.+..+.. . ....++ .......-+ .+.+ .+.++|+||++.+
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~----~~~~~Dvvf~a~~ 75 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHPKGFEDLSVED-ADPE----ELSDVDVVFLALP 75 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGGTTTEEEBEEE-TSGH----HHTTESEEEE-SC
T ss_pred CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhccccccccceeEee-cchh----HhhcCCEEEecCc
Confidence 68999999999999999999854 46665554443 2 111221 111222222 2323 3589999999965
Q ss_pred ch----HhhhhhhcCCCEEEEEccc
Q 021928 172 GF----ISNAGSLKGVQHVILLSQL 192 (305)
Q Consensus 172 g~----~~~~a~~~gv~~~V~iSS~ 192 (305)
.. ....+.+.|+ ++|=.|+.
T Consensus 76 ~~~~~~~~~~~~~~g~-~ViD~s~~ 99 (121)
T PF01118_consen 76 HGASKELAPKLLKAGI-KVIDLSGD 99 (121)
T ss_dssp HHHHHHHHHHHHHTTS-EEEESSST
T ss_pred hhHHHHHHHHHhhCCc-EEEeCCHH
Confidence 43 3344455676 55555544
|
This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C .... |
| >PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated | Back alignment and domain information |
|---|
Probab=97.35 E-value=0.0019 Score=60.55 Aligned_cols=95 Identities=20% Similarity=0.303 Sum_probs=66.1
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCc---------------------chhh------hhcCC--CcEE
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDK---------------------RNAM------ESFGT--YVES 145 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~---------------------~~~~------~~~~~--~v~~ 145 (305)
....+|+|.|+ |++|+++++.|+..|. ++.+++++. .+.. ..+.+ .++.
T Consensus 22 L~~~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~inp~v~v~~ 100 (339)
T PRK07688 22 LREKHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEINSDVRVEA 100 (339)
T ss_pred hcCCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHCCCcEEEE
Confidence 34589999998 9999999999999997 888888763 1100 11122 3555
Q ss_pred eecCCCCHHHHHHHhcCccEEEECCcch-----HhhhhhhcCCCEEEEEcccc
Q 021928 146 MAGDASNKKFLKTALRGVRSIICPSEGF-----ISNAGSLKGVQHVILLSQLS 193 (305)
Q Consensus 146 v~~D~~d~~~~~~~~~~~d~Vi~~~~g~-----~~~~a~~~gv~~~V~iSS~~ 193 (305)
+..+++. +.+.+.++++|+||.+.... +.+++.+.+++ +|+.+..+
T Consensus 101 ~~~~~~~-~~~~~~~~~~DlVid~~Dn~~~r~~ln~~~~~~~iP-~i~~~~~g 151 (339)
T PRK07688 101 IVQDVTA-EELEELVTGVDLIIDATDNFETRFIVNDAAQKYGIP-WIYGACVG 151 (339)
T ss_pred EeccCCH-HHHHHHHcCCCEEEEcCCCHHHHHHHHHHHHHhCCC-EEEEeeee
Confidence 6667654 66778899999999885543 55667777765 45555443
|
|
| >COG0623 FabI Enoyl-[acyl-carrier-protein] | Back alignment and domain information |
|---|
Probab=97.32 E-value=0.013 Score=51.56 Aligned_cols=186 Identities=13% Similarity=0.124 Sum_probs=108.4
Q ss_pred CCCCEEEEEcCC--ChHHHHHHHHHHhCCCeEEEEEcCcch---hhhhcC--CCcEEeecCCCCHHHHHHHhc-------
Q 021928 96 EARDAVLVTDGD--SDIGQMVILSLIVKRTRIKALVKDKRN---AMESFG--TYVESMAGDASNKKFLKTALR------- 161 (305)
Q Consensus 96 ~~~~~vlVtGat--G~iG~~l~~~L~~~g~~V~~~~R~~~~---~~~~~~--~~v~~v~~D~~d~~~~~~~~~------- 161 (305)
..+|++||+|-. ..|+..|+++|.++|.++.....++.- ..+... ....+++||+++.+++.++|+
T Consensus 4 L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e~l~krv~~la~~~~s~~v~~cDV~~d~~i~~~f~~i~~~~g 83 (259)
T COG0623 4 LEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGERLEKRVEELAEELGSDLVLPCDVTNDESIDALFATIKKKWG 83 (259)
T ss_pred cCCceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHHHhhccCCeEEecCCCCHHHHHHHHHHHHHhhC
Confidence 356999999964 589999999999999999988876521 111111 124579999999888877765
Q ss_pred CccEEEEC---Cc-----ch-------------------Hhhhhhh-----cCCCEEEEEccccc---ccCCCCcccccc
Q 021928 162 GVRSIICP---SE-----GF-------------------ISNAGSL-----KGVQHVILLSQLSV---YRGSGGIQALMK 206 (305)
Q Consensus 162 ~~d~Vi~~---~~-----g~-------------------~~~~a~~-----~gv~~~V~iSS~~~---~~~~~~~~~~~~ 206 (305)
..|.++|+ ++ |. +..+++. ..-..+|-++=.+. ....+.+..
T Consensus 84 ~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~ggSiltLtYlgs~r~vPnYNvMGv--- 160 (259)
T COG0623 84 KLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMNNGGSILTLTYLGSERVVPNYNVMGV--- 160 (259)
T ss_pred cccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCCCCcEEEEEeccceeecCCCchhHH---
Confidence 46999998 33 11 1111221 11123443332222 222222211
Q ss_pred hHHHHHHHHHHHHHH----hCCCCEEEEecCCcccCCC----CCcc-eee-ecCCCCCCccCHHHHHHHHHHHhhCC--C
Q 021928 207 GNARKLAEQDESMLM----ASGIPYTIIRTGVLQNTPG----GKQG-FQF-EEGCAANGSLSKEDAAFICVEALESI--P 274 (305)
Q Consensus 207 ~~~~~~~~~aE~~l~----~~gi~~tilRPg~l~~~~~----~~~~-~~~-~~~~~~~~~Is~~DvA~~iv~~l~~~--~ 274 (305)
++...+..-+||. ..++++..|..|.+..-.. .... +.. ....+....++.|||+...+.++.+- .
T Consensus 161 --AKAaLEasvRyLA~dlG~~gIRVNaISAGPIrTLAasgI~~f~~~l~~~e~~aPl~r~vt~eeVG~tA~fLlSdLssg 238 (259)
T COG0623 161 --AKAALEASVRYLAADLGKEGIRVNAISAGPIRTLAASGIGDFRKMLKENEANAPLRRNVTIEEVGNTAAFLLSDLSSG 238 (259)
T ss_pred --HHHHHHHHHHHHHHHhCccCeEEeeecccchHHHHhhccccHHHHHHHHHhhCCccCCCCHHHhhhhHHHHhcchhcc
Confidence 2211222223443 3688998888877532111 0000 000 11223356788999999999998753 3
Q ss_pred CCCcEEEEecCC
Q 021928 275 QTGLIFEVVNGE 286 (305)
Q Consensus 275 ~~~~~~~v~~g~ 286 (305)
-.|++.+|.+|-
T Consensus 239 iTGei~yVD~G~ 250 (259)
T COG0623 239 ITGEIIYVDSGY 250 (259)
T ss_pred cccceEEEcCCc
Confidence 568888888764
|
|
| >PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.27 E-value=0.0012 Score=62.13 Aligned_cols=92 Identities=15% Similarity=0.123 Sum_probs=55.6
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcchhhhhcCCCcEE------------eecCCCCHHHHHHHhcCc
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGTYVES------------MAGDASNKKFLKTALRGV 163 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~v~~------------v~~D~~d~~~~~~~~~~~ 163 (305)
++++|+|+||+|++|+++++.|.+... +++++.++.++.-+.....+.+ +...-.+.+. +.++
T Consensus 2 ~~~~V~I~GatG~iG~~l~~~L~~~p~~el~~~~~s~~~~G~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~----~~~~ 77 (349)
T PRK08664 2 MKLKVGILGATGMVGQRFVQLLANHPWFEVTALAASERSAGKTYGEAVRWQLDGPIPEEVADMEVVSTDPEA----VDDV 77 (349)
T ss_pred CCcEEEEECCCCHHHHHHHHHHHcCCCceEEEEEcChhhcCCcccccccccccccccccccceEEEeCCHHH----hcCC
Confidence 358999999999999999999997764 8888866654422111110000 1111123332 4689
Q ss_pred cEEEECCcc-h---HhhhhhhcCCCEEEEEccc
Q 021928 164 RSIICPSEG-F---ISNAGSLKGVQHVILLSQL 192 (305)
Q Consensus 164 d~Vi~~~~g-~---~~~~a~~~gv~~~V~iSS~ 192 (305)
|+|+.+.+. . +.+.+.+.|++.|.+.++.
T Consensus 78 DvVf~a~p~~~s~~~~~~~~~~G~~vIDls~~f 110 (349)
T PRK08664 78 DIVFSALPSDVAGEVEEEFAKAGKPVFSNASAH 110 (349)
T ss_pred CEEEEeCChhHHHHHHHHHHHCCCEEEECCchh
Confidence 999987432 2 3345556787655544443
|
|
| >COG3268 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=97.25 E-value=0.0008 Score=61.82 Aligned_cols=73 Identities=10% Similarity=0.025 Sum_probs=59.3
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh---hcCCCcEEeecCCCCHHHHHHHhcCccEEEECCc
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALRGVRSIICPSE 171 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~---~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~ 171 (305)
+...++|-||+||.|..++++|...|.+-.+..|+..+... .++. ++-..++.+++.+.+.+.+.++|+++.+
T Consensus 5 ~e~d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~~LG~--~~~~~p~~~p~~~~~~~~~~~VVlncvG 80 (382)
T COG3268 5 REYDIIIYGATGYAGGLVAEYLAREGLTAALAGRSSAKLDALRASLGP--EAAVFPLGVPAALEAMASRTQVVLNCVG 80 (382)
T ss_pred cceeEEEEccccchhHHHHHHHHHcCCchhhccCCHHHHHHHHHhcCc--cccccCCCCHHHHHHHHhcceEEEeccc
Confidence 45789999999999999999999999988888999887543 2343 3444555568999999999999998844
|
|
| >TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form | Back alignment and domain information |
|---|
Probab=97.21 E-value=0.0013 Score=61.95 Aligned_cols=92 Identities=12% Similarity=-0.001 Sum_probs=54.0
Q ss_pred CEEEEEcCCChHHHHHHHHHHhC-CCeEEEE-EcCc--ch-hhhhcCCCcEEe-ecCCCCHHHHHHHhcCccEEEECCcc
Q 021928 99 DAVLVTDGDSDIGQMVILSLIVK-RTRIKAL-VKDK--RN-AMESFGTYVESM-AGDASNKKFLKTALRGVRSIICPSEG 172 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~~~-g~~V~~~-~R~~--~~-~~~~~~~~v~~v-~~D~~d~~~~~~~~~~~d~Vi~~~~g 172 (305)
++|.|.||||.+|+++++.|.+. +++++.+ .++. .+ ..+.++ .+... ..++.+ .+..+++.++|+||++.+.
T Consensus 1 ~kVaIiGATG~vG~ellr~L~~hP~~el~~l~~s~~sagk~~~~~~~-~l~~~~~~~~~~-~~~~~~~~~~DvVf~alP~ 78 (346)
T TIGR01850 1 IKVAIVGASGYTGGELLRLLLNHPEVEITYLVSSRESAGKPVSEVHP-HLRGLVDLNLEP-IDEEEIAEDADVVFLALPH 78 (346)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCceEEEEeccchhcCCChHHhCc-cccccCCceeec-CCHHHhhcCCCEEEECCCc
Confidence 58999999999999999999977 4688854 4332 12 111122 11111 111221 1123344689999998553
Q ss_pred h----HhhhhhhcCCCEEEEEcccc
Q 021928 173 F----ISNAGSLKGVQHVILLSQLS 193 (305)
Q Consensus 173 ~----~~~~a~~~gv~~~V~iSS~~ 193 (305)
. +...+.+.| .++|-.|+..
T Consensus 79 ~~s~~~~~~~~~~G-~~VIDlS~~f 102 (346)
T TIGR01850 79 GVSAELAPELLAAG-VKVIDLSADF 102 (346)
T ss_pred hHHHHHHHHHHhCC-CEEEeCChhh
Confidence 2 333344456 5788777764
|
This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons. |
| >COG2085 Predicted dinucleotide-binding enzymes [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.20 E-value=0.00093 Score=57.89 Aligned_cols=89 Identities=8% Similarity=0.069 Sum_probs=55.5
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEECCc-----c
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE-----G 172 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~-----g 172 (305)
||++.|.| +|.||+.++++|.+.||+|++..|+.++..+......... + ..-+...+.+.+|+||.+.+ +
T Consensus 1 m~~~~i~G-tGniG~alA~~~a~ag~eV~igs~r~~~~~~a~a~~l~~~---i-~~~~~~dA~~~aDVVvLAVP~~a~~~ 75 (211)
T COG2085 1 MMIIAIIG-TGNIGSALALRLAKAGHEVIIGSSRGPKALAAAAAALGPL---I-TGGSNEDAAALADVVVLAVPFEAIPD 75 (211)
T ss_pred CcEEEEec-cChHHHHHHHHHHhCCCeEEEecCCChhHHHHHHHhhccc---c-ccCChHHHHhcCCEEEEeccHHHHHh
Confidence 35555555 6999999999999999999999777655332211111111 1 12345667889999999854 3
Q ss_pred hHhhhhhhcCCCEEEEEccc
Q 021928 173 FISNAGSLKGVQHVILLSQL 192 (305)
Q Consensus 173 ~~~~~a~~~gv~~~V~iSS~ 192 (305)
.+.+.....+ .++|.-.+.
T Consensus 76 v~~~l~~~~~-~KIvID~tn 94 (211)
T COG2085 76 VLAELRDALG-GKIVIDATN 94 (211)
T ss_pred HHHHHHHHhC-CeEEEecCC
Confidence 3344444444 567654444
|
|
| >PLN02383 aspartate semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=97.17 E-value=0.0026 Score=59.78 Aligned_cols=89 Identities=15% Similarity=0.137 Sum_probs=53.2
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCe---EEEEE--cCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEECCc
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTR---IKALV--KDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE 171 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~---V~~~~--R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~ 171 (305)
..++|.|.||||++|+++++.|.+++|. +..+. |+..+.... . ..+....++. . ..+.++|+||++.+
T Consensus 6 ~~~kVaVvGAtG~vG~eLlrlL~~~~hP~~~l~~las~rsaGk~~~~-~-~~~~~v~~~~-~----~~~~~~D~vf~a~p 78 (344)
T PLN02383 6 NGPSVAIVGVTGAVGQEFLSVLTDRDFPYSSLKMLASARSAGKKVTF-E-GRDYTVEELT-E----DSFDGVDIALFSAG 78 (344)
T ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCCcceEEEEEccCCCCCeeee-c-CceeEEEeCC-H----HHHcCCCEEEECCC
Confidence 4589999999999999999999998874 33332 333332211 1 1333333443 1 23578999999855
Q ss_pred ch----HhhhhhhcCCCEEEEEcccc
Q 021928 172 GF----ISNAGSLKGVQHVILLSQLS 193 (305)
Q Consensus 172 g~----~~~~a~~~gv~~~V~iSS~~ 193 (305)
.. +...+.+.|+ ++|=.|+..
T Consensus 79 ~~~s~~~~~~~~~~g~-~VIDlS~~f 103 (344)
T PLN02383 79 GSISKKFGPIAVDKGA-VVVDNSSAF 103 (344)
T ss_pred cHHHHHHHHHHHhCCC-EEEECCchh
Confidence 32 2222334454 466666553
|
|
| >TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E | Back alignment and domain information |
|---|
Probab=97.15 E-value=0.0041 Score=53.98 Aligned_cols=95 Identities=16% Similarity=0.215 Sum_probs=63.9
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcc-------------------hh------hhhcCCC--cEEee
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKR-------------------NA------MESFGTY--VESMA 147 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~-------------------~~------~~~~~~~--v~~v~ 147 (305)
....+|+|.|+ |++|+++++.|+..|. ++++++++.- |. ...+.+. ++.+.
T Consensus 19 l~~~~VlviG~-GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~~ 97 (202)
T TIGR02356 19 LLNSHVLIIGA-GGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNSDIQVTALK 97 (202)
T ss_pred hcCCCEEEECC-CHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCCCCEEEEeh
Confidence 34589999996 8999999999999996 7888877621 10 0112233 33444
Q ss_pred cCCCCHHHHHHHhcCccEEEECCcch-----HhhhhhhcCCCEEEEEcccc
Q 021928 148 GDASNKKFLKTALRGVRSIICPSEGF-----ISNAGSLKGVQHVILLSQLS 193 (305)
Q Consensus 148 ~D~~d~~~~~~~~~~~d~Vi~~~~g~-----~~~~a~~~gv~~~V~iSS~~ 193 (305)
..+. .+.+.+.++++|.||.+.+.. +.+.+++.+++ +|+.+..+
T Consensus 98 ~~i~-~~~~~~~~~~~D~Vi~~~d~~~~r~~l~~~~~~~~ip-~i~~~~~g 146 (202)
T TIGR02356 98 ERVT-AENLELLINNVDLVLDCTDNFATRYLINDACVALGTP-LISAAVVG 146 (202)
T ss_pred hcCC-HHHHHHHHhCCCEEEECCCCHHHHHHHHHHHHHcCCC-EEEEEecc
Confidence 4443 366778899999999885432 55667777765 56655443
|
coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli. |
| >PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.13 E-value=0.00091 Score=61.84 Aligned_cols=96 Identities=13% Similarity=0.060 Sum_probs=58.0
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh-----------cCCCc------EEeecCCCCHHHHHHHh
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-----------FGTYV------ESMAGDASNKKFLKTAL 160 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~-----------~~~~v------~~v~~D~~d~~~~~~~~ 160 (305)
.++|.|+| .|.+|..++..|+++|++|++..|+++..... ...+. ......+.-..++.+++
T Consensus 2 ~~~V~VIG-~G~mG~~iA~~la~~G~~V~v~d~~~~~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~i~~~~~~~~a~ 80 (308)
T PRK06129 2 MGSVAIIG-AGLIGRAWAIVFARAGHEVRLWDADPAAAAAAPAYIAGRLEDLAAFDLLDGEAPDAVLARIRVTDSLADAV 80 (308)
T ss_pred CcEEEEEC-ccHHHHHHHHHHHHCCCeeEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCchhhHHHHhcCeEEECcHHHhh
Confidence 36899999 59999999999999999999999997653221 01110 00000111113455678
Q ss_pred cCccEEEECCcch------HhhhhhhcCCCEEEEEccccc
Q 021928 161 RGVRSIICPSEGF------ISNAGSLKGVQHVILLSQLSV 194 (305)
Q Consensus 161 ~~~d~Vi~~~~g~------~~~~a~~~gv~~~V~iSS~~~ 194 (305)
+++|.|+.+.+.. +...+.....++.++.||...
T Consensus 81 ~~ad~Vi~avpe~~~~k~~~~~~l~~~~~~~~ii~ssts~ 120 (308)
T PRK06129 81 ADADYVQESAPENLELKRALFAELDALAPPHAILASSTSA 120 (308)
T ss_pred CCCCEEEECCcCCHHHHHHHHHHHHHhCCCcceEEEeCCC
Confidence 8999999884421 111122233345555666654
|
|
| >PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional | Back alignment and domain information |
|---|
Probab=97.12 E-value=0.0061 Score=61.62 Aligned_cols=73 Identities=19% Similarity=0.236 Sum_probs=62.1
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHH-hcCccEEEECCc
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA-LRGVRSIICPSE 171 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~-~~~~d~Vi~~~~ 171 (305)
.++|+|.|. |-+|+.+++.|.++|+++++++++++........+..++.+|.+|.+.++++ ++++|+++.+.+
T Consensus 400 ~~~vII~G~-Gr~G~~va~~L~~~g~~vvvID~d~~~v~~~~~~g~~v~~GDat~~~~L~~agi~~A~~vv~~~~ 473 (601)
T PRK03659 400 KPQVIIVGF-GRFGQVIGRLLMANKMRITVLERDISAVNLMRKYGYKVYYGDATQLELLRAAGAEKAEAIVITCN 473 (601)
T ss_pred cCCEEEecC-chHHHHHHHHHHhCCCCEEEEECCHHHHHHHHhCCCeEEEeeCCCHHHHHhcCCccCCEEEEEeC
Confidence 478999996 9999999999999999999999998875544445688999999999988775 678999998744
|
|
| >TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic | Back alignment and domain information |
|---|
Probab=97.11 E-value=0.0021 Score=61.46 Aligned_cols=168 Identities=12% Similarity=0.090 Sum_probs=91.4
Q ss_pred CCCCEEEEEcC----------------CChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHH-HH
Q 021928 96 EARDAVLVTDG----------------DSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFL-KT 158 (305)
Q Consensus 96 ~~~~~vlVtGa----------------tG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~-~~ 158 (305)
..+++|+|||| ||.+|.++++.|..+|++|+++.+..... .+.++ ...|+.+.+++ +.
T Consensus 183 ~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~---~~~~~--~~~~v~~~~~~~~~ 257 (390)
T TIGR00521 183 LEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLL---TPPGV--KSIKVSTAEEMLEA 257 (390)
T ss_pred cCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccC---CCCCc--EEEEeccHHHHHHH
Confidence 45699999999 35799999999999999999988765321 22223 45788887776 43
Q ss_pred Hh----cCccEEEECCcc--hHhhhhhhcCCCE------EEEEccc------ccccCCCCcccccchHHHH-HHHHHHHH
Q 021928 159 AL----RGVRSIICPSEG--FISNAGSLKGVQH------VILLSQL------SVYRGSGGIQALMKGNARK-LAEQDESM 219 (305)
Q Consensus 159 ~~----~~~d~Vi~~~~g--~~~~~a~~~gv~~------~V~iSS~------~~~~~~~~~~~~~~~~~~~-~~~~aE~~ 219 (305)
++ ..+|++|++++- +........++++ +=+.... ....+...+..|... ... ....+.+-
T Consensus 258 ~~~~~~~~~D~~i~~Aavsd~~~~~~~~~Ki~~~~~~~~l~L~~~pdil~~l~~~~~~~~lvgF~aE-t~~~l~~~A~~k 336 (390)
T TIGR00521 258 ALNELAKDFDIFISAAAVADFKPKTVFEGKIKKQGEELSLKLVKNPDIIAEVRKIKKHQVIVGFKAE-TNDDLIKYAKEK 336 (390)
T ss_pred HHHhhcccCCEEEEccccccccccccccccccccCCceeEEEEeCcHHHHHHHhhCCCcEEEEEEcC-CCcHHHHHHHHH
Confidence 33 468999988431 1110000111111 1111111 111111111111110 001 34456677
Q ss_pred HHhCCCCEEEEecCCcccCCC--CCcceeeecC-CCCCCccCHHHHHHHHHHHh
Q 021928 220 LMASGIPYTIIRTGVLQNTPG--GKQGFQFEEG-CAANGSLSKEDAAFICVEAL 270 (305)
Q Consensus 220 l~~~gi~~tilRPg~l~~~~~--~~~~~~~~~~-~~~~~~Is~~DvA~~iv~~l 270 (305)
+++.+.++++...-... +.+ ..+.+.+... .......+..++|+.++..+
T Consensus 337 l~~k~~D~ivaN~i~~~-~fg~~~n~~~li~~~~~~~~~~~~K~~iA~~i~~~~ 389 (390)
T TIGR00521 337 LKKKNLDMIVANDVSQR-GFGSDENEVYIFSKHGHKELPLMSKLEVAERILDEI 389 (390)
T ss_pred HHHcCCCEEEEccCCcc-ccCCCCcEEEEEECCCeEEeCCCCHHHHHHHHHHHh
Confidence 88899999988752210 111 2233333222 22345568899999988754
|
This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity. |
| >TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal | Back alignment and domain information |
|---|
Probab=97.11 E-value=0.0011 Score=58.66 Aligned_cols=61 Identities=5% Similarity=0.069 Sum_probs=42.6
Q ss_pred cCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHH-------hcCccEEEECCc
Q 021928 105 DGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA-------LRGVRSIICPSE 171 (305)
Q Consensus 105 GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~-------~~~~d~Vi~~~~ 171 (305)
.++|+||++++++|+++|++|+++.+... .. . .....+|+.+.+++.++ +..+|++|++++
T Consensus 22 ~SSGgIG~AIA~~la~~Ga~Vvlv~~~~~-l~---~--~~~~~~Dv~d~~s~~~l~~~v~~~~g~iDiLVnnAg 89 (227)
T TIGR02114 22 HSTGHLGKIITETFLSAGHEVTLVTTKRA-LK---P--EPHPNLSIREIETTKDLLITLKELVQEHDILIHSMA 89 (227)
T ss_pred CcccHHHHHHHHHHHHCCCEEEEEcChhh-cc---c--ccCCcceeecHHHHHHHHHHHHHHcCCCCEEEECCE
Confidence 34899999999999999999999876321 11 1 01234688876665543 346799998854
|
In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity. |
| >PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP | Back alignment and domain information |
|---|
Probab=97.08 E-value=0.007 Score=48.85 Aligned_cols=93 Identities=14% Similarity=0.196 Sum_probs=62.5
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcchh-------------------------hhhcCC--CcEEeecC
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNA-------------------------MESFGT--YVESMAGD 149 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~-------------------------~~~~~~--~v~~v~~D 149 (305)
.++|+|.|+ |.+|+++++.|+..|. ++.+++.+.-.. .....+ +++.+..+
T Consensus 2 ~~~v~iiG~-G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~~ 80 (135)
T PF00899_consen 2 NKRVLIIGA-GGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPEK 80 (135)
T ss_dssp T-EEEEEST-SHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEESH
T ss_pred CCEEEEECc-CHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeecc
Confidence 379999998 8999999999999997 677776542110 001122 45556666
Q ss_pred CCCHHHHHHHhcCccEEEECCcc-----hHhhhhhhcCCCEEEEEcccc
Q 021928 150 ASNKKFLKTALRGVRSIICPSEG-----FISNAGSLKGVQHVILLSQLS 193 (305)
Q Consensus 150 ~~d~~~~~~~~~~~d~Vi~~~~g-----~~~~~a~~~gv~~~V~iSS~~ 193 (305)
+ +.+.+.+.++++|.||.+... .+.+.+++.++ .+|..+..+
T Consensus 81 ~-~~~~~~~~~~~~d~vi~~~d~~~~~~~l~~~~~~~~~-p~i~~~~~g 127 (135)
T PF00899_consen 81 I-DEENIEELLKDYDIVIDCVDSLAARLLLNEICREYGI-PFIDAGVNG 127 (135)
T ss_dssp C-SHHHHHHHHHTSSEEEEESSSHHHHHHHHHHHHHTT--EEEEEEEET
T ss_pred c-ccccccccccCCCEEEEecCCHHHHHHHHHHHHHcCC-CEEEEEeec
Confidence 6 456778888999999987443 25566777776 566666543
|
Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A .... |
| >cd00704 MDH Malate dehydrogenase | Back alignment and domain information |
|---|
Probab=97.07 E-value=0.0015 Score=60.97 Aligned_cols=64 Identities=16% Similarity=0.174 Sum_probs=47.0
Q ss_pred EEEEEcCCChHHHHHHHHHHhCCC-------eEEEEEcCc--chhhhhcCCCcEEeecCCCCH-----------HHHHHH
Q 021928 100 AVLVTDGDSDIGQMVILSLIVKRT-------RIKALVKDK--RNAMESFGTYVESMAGDASNK-----------KFLKTA 159 (305)
Q Consensus 100 ~vlVtGatG~iG~~l~~~L~~~g~-------~V~~~~R~~--~~~~~~~~~~v~~v~~D~~d~-----------~~~~~~ 159 (305)
+|.|+||+|.||+.++..|+..|. +++++++++ +. .+-...|+.|. ....+.
T Consensus 2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~--------~~g~~~Dl~d~~~~~~~~~~i~~~~~~~ 73 (323)
T cd00704 2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKA--------LEGVVMELQDCAFPLLKGVVITTDPEEA 73 (323)
T ss_pred EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCc--------cceeeeehhhhcccccCCcEEecChHHH
Confidence 799999999999999999998662 488888876 32 22333344432 345688
Q ss_pred hcCccEEEECCc
Q 021928 160 LRGVRSIICPSE 171 (305)
Q Consensus 160 ~~~~d~Vi~~~~ 171 (305)
++++|+||++++
T Consensus 74 ~~~aDiVVitAG 85 (323)
T cd00704 74 FKDVDVAILVGA 85 (323)
T ss_pred hCCCCEEEEeCC
Confidence 999999998843
|
Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=97.07 E-value=0.0031 Score=61.19 Aligned_cols=68 Identities=16% Similarity=0.131 Sum_probs=51.8
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcch-h----hhhcCCCcEEeecCCCCHHHHHHHhcCccEEEECC
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-A----MESFGTYVESMAGDASNKKFLKTALRGVRSIICPS 170 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~-~----~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~ 170 (305)
..++|+|+|+.+ +|..+++.|+++|++|.+.+++... . .+....+++++.+|..+ ....++|+||.++
T Consensus 4 ~~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~~~~~~~~~~~~~-----~~~~~~d~vv~~~ 76 (450)
T PRK14106 4 KGKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGELGIELVLGEYPE-----EFLEGVDLVVVSP 76 (450)
T ss_pred CCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCEEEeCCcch-----hHhhcCCEEEECC
Confidence 458999999866 9999999999999999999987522 2 11112357788888876 3456799999873
|
|
| >PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis [] | Back alignment and domain information |
|---|
Probab=96.98 E-value=0.0029 Score=51.71 Aligned_cols=65 Identities=15% Similarity=0.178 Sum_probs=46.3
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCC--CeEEEEEcCcchhhhh---------cC-CCcEEeecCCCCHHHHHHHhcCccEE
Q 021928 99 DAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRNAMES---------FG-TYVESMAGDASNKKFLKTALRGVRSI 166 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~~~g--~~V~~~~R~~~~~~~~---------~~-~~v~~v~~D~~d~~~~~~~~~~~d~V 166 (305)
|+|.|+||+|.+|++++..|...+ .+++++++++++.... +. ....+... + .+.++++|+|
T Consensus 1 ~KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~~---~----~~~~~~aDiv 73 (141)
T PF00056_consen 1 MKVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITSG---D----YEALKDADIV 73 (141)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEES---S----GGGGTTESEE
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhcccccccccc---c----ccccccccEE
Confidence 689999999999999999999888 4799999986552211 11 12222222 2 3458899999
Q ss_pred EECC
Q 021928 167 ICPS 170 (305)
Q Consensus 167 i~~~ 170 (305)
|.++
T Consensus 74 vita 77 (141)
T PF00056_consen 74 VITA 77 (141)
T ss_dssp EETT
T ss_pred EEec
Confidence 9873
|
L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C .... |
| >cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase | Back alignment and domain information |
|---|
Probab=96.96 E-value=0.0018 Score=53.22 Aligned_cols=71 Identities=15% Similarity=0.070 Sum_probs=48.9
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCC-CeEEEEEcCcchhhhhcCC-CcEEeecCCCCHHHHHHHhcCccEEEECCc
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAMESFGT-YVESMAGDASNKKFLKTALRGVRSIICPSE 171 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~R~~~~~~~~~~~-~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~ 171 (305)
..++|+|+|+ |.+|+.+++.|.+.| ++|.++.|++++..+.... ....+..+..+ ..++++++|+||++.+
T Consensus 18 ~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dvvi~~~~ 90 (155)
T cd01065 18 KGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELGIAIAYLD---LEELLAEADLIINTTP 90 (155)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcccceeecc---hhhccccCCEEEeCcC
Confidence 3589999998 999999999999996 7899999987664332111 11111223333 3344789999998843
|
Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann |
| >TIGR01915 npdG NADPH-dependent F420 reductase | Back alignment and domain information |
|---|
Probab=96.95 E-value=0.0012 Score=58.08 Aligned_cols=72 Identities=18% Similarity=0.135 Sum_probs=48.1
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCC---CcEEeecC--CCCHHHHHHHhcCccEEEECCc
Q 021928 99 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGT---YVESMAGD--ASNKKFLKTALRGVRSIICPSE 171 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~---~v~~v~~D--~~d~~~~~~~~~~~d~Vi~~~~ 171 (305)
|+|.|+||+|.+|..+++.|++.|++|.+..|++++....... .+.....+ +.. ....++++.+|+||.+.+
T Consensus 1 MkI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~~~~~l~~~~~~~~~~~g~~~~~~~-~~~~ea~~~aDvVilavp 77 (219)
T TIGR01915 1 MKIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEKAEEAAAKALEELGHGGSDIKVTG-ADNAEAAKRADVVILAVP 77 (219)
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHHHHHHHHHHHHhhccccCCCceEEE-eChHHHHhcCCEEEEECC
Confidence 5799999999999999999999999999999988664322110 00000000 000 122456778999998844
|
This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase. |
| >PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism | Back alignment and domain information |
|---|
Probab=96.94 E-value=0.0038 Score=53.48 Aligned_cols=62 Identities=10% Similarity=0.081 Sum_probs=39.6
Q ss_pred CCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCC--HHHHHHHhcCccEEEECC
Q 021928 106 GDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASN--KKFLKTALRGVRSIICPS 170 (305)
Q Consensus 106 atG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d--~~~~~~~~~~~d~Vi~~~ 170 (305)
.||..|.+|++.+..+|++|+.+.... ... .+.+++.+...-.+ .+.+.+.+..+|++|+++
T Consensus 27 SSG~~G~~lA~~~~~~Ga~V~li~g~~-~~~--~p~~~~~i~v~sa~em~~~~~~~~~~~Di~I~aA 90 (185)
T PF04127_consen 27 SSGKMGAALAEEAARRGAEVTLIHGPS-SLP--PPPGVKVIRVESAEEMLEAVKELLPSADIIIMAA 90 (185)
T ss_dssp --SHHHHHHHHHHHHTT-EEEEEE-TT-S------TTEEEEE-SSHHHHHHHHHHHGGGGSEEEE-S
T ss_pred CcCHHHHHHHHHHHHCCCEEEEEecCc-ccc--ccccceEEEecchhhhhhhhccccCcceeEEEec
Confidence 489999999999999999999998874 211 24467766643332 244556667789999883
|
These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A. |
| >PRK00048 dihydrodipicolinate reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.94 E-value=0.0045 Score=55.80 Aligned_cols=79 Identities=14% Similarity=0.022 Sum_probs=49.8
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhC-CCeEEEEEc-CcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEEC-Ccch-
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVK-RTRIKALVK-DKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP-SEGF- 173 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~R-~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~-~~g~- 173 (305)
+++|+|+|++|.+|+.+++.+.+. +.++++++. +++..... -..++...+++.++++++|+|+.+ .+..
T Consensus 1 ~mkV~IiG~~G~mG~~i~~~l~~~~~~elvav~d~~~~~~~~~-------~~~~i~~~~dl~~ll~~~DvVid~t~p~~~ 73 (257)
T PRK00048 1 MIKVAVAGASGRMGRELIEAVEAAEDLELVAAVDRPGSPLVGQ-------GALGVAITDDLEAVLADADVLIDFTTPEAT 73 (257)
T ss_pred CcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCcccccc-------CCCCccccCCHHHhccCCCEEEECCCHHHH
Confidence 379999999999999999988864 688887654 44332211 112332334556666788999855 3322
Q ss_pred --HhhhhhhcCC
Q 021928 174 --ISNAGSLKGV 183 (305)
Q Consensus 174 --~~~~a~~~gv 183 (305)
....+.++|+
T Consensus 74 ~~~~~~al~~G~ 85 (257)
T PRK00048 74 LENLEFALEHGK 85 (257)
T ss_pred HHHHHHHHHcCC
Confidence 3344455554
|
|
| >PRK00258 aroE shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.90 E-value=0.0015 Score=59.59 Aligned_cols=69 Identities=22% Similarity=0.226 Sum_probs=48.9
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCC-CeEEEEEcCcchhhhh---cCCCcEEeecCCCCHHHHHHHhcCccEEEECC
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALRGVRSIICPS 170 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~R~~~~~~~~---~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~ 170 (305)
..+++++|+|+ |++|++++..|...| .+|+++.|+.++..+. +.... .+..++ ...+.+.++|+||+++
T Consensus 121 ~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~-~~~~~~----~~~~~~~~~DivInaT 193 (278)
T PRK00258 121 LKGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALG-KAELDL----ELQEELADFDLIINAT 193 (278)
T ss_pred CCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhcc-ceeecc----cchhccccCCEEEECC
Confidence 45689999997 999999999999999 7999999998765432 21110 011111 2245667899999883
|
|
| >TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.0052 Score=56.35 Aligned_cols=71 Identities=8% Similarity=0.014 Sum_probs=53.5
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEECCcc
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG 172 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~g 172 (305)
..+++++|+|+ |.+|+.+++.|...|++|++..|++++...........+ +.+.+.+.++++|+||++.+.
T Consensus 149 l~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~~~~~~~g~~~~-----~~~~l~~~l~~aDiVint~P~ 219 (287)
T TIGR02853 149 IHGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADLARITEMGLIPF-----PLNKLEEKVAEIDIVINTIPA 219 (287)
T ss_pred CCCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeee-----cHHHHHHHhccCCEEEECCCh
Confidence 35689999998 889999999999999999999998765433222122222 235677888999999988553
|
This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA. |
| >TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent | Back alignment and domain information |
|---|
Probab=96.84 E-value=0.0026 Score=59.34 Aligned_cols=65 Identities=17% Similarity=0.105 Sum_probs=46.2
Q ss_pred EEEEEcCCChHHHHHHHHHHhCCC-------eEEEEEcCcchhhhhcCCCcEEeecCCCCHH-----------HHHHHhc
Q 021928 100 AVLVTDGDSDIGQMVILSLIVKRT-------RIKALVKDKRNAMESFGTYVESMAGDASNKK-----------FLKTALR 161 (305)
Q Consensus 100 ~vlVtGatG~iG~~l~~~L~~~g~-------~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~-----------~~~~~~~ 161 (305)
+|+|+||+|.+|+.++..|+..+. +++++++++... ..+-...|+.|.. ...+.++
T Consensus 1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~------~a~g~~~Dl~d~~~~~~~~~~~~~~~~~~~~ 74 (324)
T TIGR01758 1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMK------VLEGVVMELMDCAFPLLDGVVPTHDPAVAFT 74 (324)
T ss_pred CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCccc------ccceeEeehhcccchhcCceeccCChHHHhC
Confidence 589999999999999999998553 588888865321 0222334444432 3467899
Q ss_pred CccEEEECC
Q 021928 162 GVRSIICPS 170 (305)
Q Consensus 162 ~~d~Vi~~~ 170 (305)
++|+||+++
T Consensus 75 ~aDiVVitA 83 (324)
T TIGR01758 75 DVDVAILVG 83 (324)
T ss_pred CCCEEEEcC
Confidence 999999883
|
This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography |
| >TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2 | Back alignment and domain information |
|---|
Probab=96.83 E-value=0.015 Score=50.36 Aligned_cols=74 Identities=9% Similarity=0.126 Sum_probs=52.9
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcC---cchhh---------------------hhcCC--CcEEeecC
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKD---KRNAM---------------------ESFGT--YVESMAGD 149 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~---~~~~~---------------------~~~~~--~v~~v~~D 149 (305)
..++|+|.|+ |++|+.++..|+..|. ++++++++ .+... ..+.+ .++.+..+
T Consensus 20 ~~~~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~~iG~~Ka~~~~~~l~~inp~~~i~~~~~~ 98 (200)
T TIGR02354 20 EQATVAICGL-GGLGSNVAINLARAGIGKLILVDFDVVEPSNLNRQQYKASQVGEPKTEALKENISEINPYTEIEAYDEK 98 (200)
T ss_pred hCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCEEcccccccccCChhhCCCHHHHHHHHHHHHHCCCCEEEEeeee
Confidence 4589999998 8899999999999998 68888777 22210 01122 34455556
Q ss_pred CCCHHHHHHHhcCccEEEECCcc
Q 021928 150 ASNKKFLKTALRGVRSIICPSEG 172 (305)
Q Consensus 150 ~~d~~~~~~~~~~~d~Vi~~~~g 172 (305)
++ .+.+.+.++++|.||.+...
T Consensus 99 i~-~~~~~~~~~~~DlVi~a~Dn 120 (200)
T TIGR02354 99 IT-EENIDKFFKDADIVCEAFDN 120 (200)
T ss_pred CC-HhHHHHHhcCCCEEEECCCC
Confidence 64 46778889999999988443
|
Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter. |
| >PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=96.82 E-value=0.0058 Score=51.08 Aligned_cols=64 Identities=9% Similarity=-0.034 Sum_probs=47.3
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEEC
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 169 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~ 169 (305)
|++|.+.|- |-.|+.++++|+++|++|.+..|++++..+....+++.. ++..++.+.+|+|+.+
T Consensus 1 m~~Ig~IGl-G~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~g~~~~-------~s~~e~~~~~dvvi~~ 64 (163)
T PF03446_consen 1 MMKIGFIGL-GNMGSAMARNLAKAGYEVTVYDRSPEKAEALAEAGAEVA-------DSPAEAAEQADVVILC 64 (163)
T ss_dssp -BEEEEE---SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHHTTEEEE-------SSHHHHHHHBSEEEE-
T ss_pred CCEEEEEch-HHHHHHHHHHHHhcCCeEEeeccchhhhhhhHHhhhhhh-------hhhhhHhhcccceEee
Confidence 589999997 999999999999999999999999877655443332221 3455667778999977
|
1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A .... |
| >TIGR02355 moeB molybdopterin synthase sulfurylase MoeB | Back alignment and domain information |
|---|
Probab=96.76 E-value=0.02 Score=51.09 Aligned_cols=93 Identities=9% Similarity=0.090 Sum_probs=61.6
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcchh-------------------------hhhcCCCc--EEeec
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNA-------------------------MESFGTYV--ESMAG 148 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~-------------------------~~~~~~~v--~~v~~ 148 (305)
...+|+|.|+ |++|+++++.|+..|. ++++++.+.-.. .....+.+ +.+..
T Consensus 23 ~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~inp~v~i~~~~~ 101 (240)
T TIGR02355 23 KASRVLIVGL-GGLGCAASQYLAAAGVGNLTLLDFDTVSLSNLQRQVLHSDANIGQPKVESAKDALTQINPHIAINPINA 101 (240)
T ss_pred hCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCcccccCcccceeeeHhhCCCcHHHHHHHHHHHHCCCcEEEEEec
Confidence 4589999997 8999999999999995 677766553110 00112333 33333
Q ss_pred CCCCHHHHHHHhcCccEEEECCcch-----HhhhhhhcCCCEEEEEccc
Q 021928 149 DASNKKFLKTALRGVRSIICPSEGF-----ISNAGSLKGVQHVILLSQL 192 (305)
Q Consensus 149 D~~d~~~~~~~~~~~d~Vi~~~~g~-----~~~~a~~~gv~~~V~iSS~ 192 (305)
.+ +.+.+.+.++++|.||.+.... +.+++.+.+++ +|+.+..
T Consensus 102 ~i-~~~~~~~~~~~~DlVvd~~D~~~~r~~ln~~~~~~~ip-~v~~~~~ 148 (240)
T TIGR02355 102 KL-DDAELAALIAEHDIVVDCTDNVEVRNQLNRQCFAAKVP-LVSGAAI 148 (240)
T ss_pred cC-CHHHHHHHhhcCCEEEEcCCCHHHHHHHHHHHHHcCCC-EEEEEec
Confidence 33 3456778899999999885432 55677888875 5555544
|
This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899). |
| >TIGR00518 alaDH alanine dehydrogenase | Back alignment and domain information |
|---|
Probab=96.70 E-value=0.0066 Score=57.68 Aligned_cols=72 Identities=11% Similarity=0.032 Sum_probs=54.5
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEEC
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 169 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~ 169 (305)
.+.+|+|+|+ |.+|+..++.|...|.+|+++.|++++........-..+..+..+.+.+.+.+.++|+||.+
T Consensus 166 ~~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~g~~v~~~~~~~~~l~~~l~~aDvVI~a 237 (370)
T TIGR00518 166 EPGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQLDAEFGGRIHTRYSNAYEIEDAVKRADLLIGA 237 (370)
T ss_pred CCceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhcCceeEeccCCHHHHHHHHccCCEEEEc
Confidence 4577999988 99999999999999999999999876643321111112334556778888999999999977
|
The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP. |
| >PRK06019 phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed | Back alignment and domain information |
|---|
Probab=96.67 E-value=0.0094 Score=56.62 Aligned_cols=68 Identities=15% Similarity=0.209 Sum_probs=55.6
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEE
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIIC 168 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~ 168 (305)
+++|+|.|+ |.+|+.++..+.+.|++|++++.++......+.+ ..+.+|+.|.+.+.++.+.+|+|..
T Consensus 2 ~~~igilG~-Gql~~ml~~aa~~lG~~v~~~d~~~~~pa~~~ad--~~~~~~~~D~~~l~~~a~~~dvit~ 69 (372)
T PRK06019 2 MKTIGIIGG-GQLGRMLALAAAPLGYKVIVLDPDPDSPAAQVAD--EVIVADYDDVAALRELAEQCDVITY 69 (372)
T ss_pred CCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCCCCchhHhCc--eEEecCCCCHHHHHHHHhcCCEEEe
Confidence 478999998 8999999999999999999998876543322322 5666899999999999999998764
|
|
| >PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ] | Back alignment and domain information |
|---|
Probab=96.64 E-value=0.0064 Score=48.55 Aligned_cols=87 Identities=14% Similarity=0.102 Sum_probs=50.1
Q ss_pred CEEEEEcCCChHHHHHHHHHHh-CCCeEEEEEcCcc-hhh-hhcC--CCcEEeecCCCCHHHHHHHhcCccEEEEC-Ccc
Q 021928 99 DAVLVTDGDSDIGQMVILSLIV-KRTRIKALVKDKR-NAM-ESFG--TYVESMAGDASNKKFLKTALRGVRSIICP-SEG 172 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~~-~g~~V~~~~R~~~-~~~-~~~~--~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~-~~g 172 (305)
++|+|.|++|..|+.+++.+.+ .++++.+...... ... +..+ .+.. ...+.-.++++++++.+|++|.. .+.
T Consensus 1 mrV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~--~~~~~v~~~l~~~~~~~DVvIDfT~p~ 78 (124)
T PF01113_consen 1 MRVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIG--PLGVPVTDDLEELLEEADVVIDFTNPD 78 (124)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSS--T-SSBEBS-HHHHTTH-SEEEEES-HH
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcC--CcccccchhHHHhcccCCEEEEcCChH
Confidence 5899999999999999999998 6788777654433 111 0000 0000 11111125567778779999955 343
Q ss_pred h---HhhhhhhcCCCEEE
Q 021928 173 F---ISNAGSLKGVQHVI 187 (305)
Q Consensus 173 ~---~~~~a~~~gv~~~V 187 (305)
. ..+.+.+.+++-++
T Consensus 79 ~~~~~~~~~~~~g~~~Vi 96 (124)
T PF01113_consen 79 AVYDNLEYALKHGVPLVI 96 (124)
T ss_dssp HHHHHHHHHHHHT-EEEE
T ss_pred HhHHHHHHHHhCCCCEEE
Confidence 2 44556667765443
|
In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A .... |
| >PRK08762 molybdopterin biosynthesis protein MoeB; Validated | Back alignment and domain information |
|---|
Probab=96.63 E-value=0.016 Score=55.16 Aligned_cols=92 Identities=14% Similarity=0.209 Sum_probs=61.8
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCc-------------------chhh---h---hcCCCc--EEeec
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDK-------------------RNAM---E---SFGTYV--ESMAG 148 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~-------------------~~~~---~---~~~~~v--~~v~~ 148 (305)
..++|+|.|+ |++|+++++.|+..|. ++++++++. .|.. + ...+.+ +.+..
T Consensus 134 ~~~~VlvvG~-GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~~~ 212 (376)
T PRK08762 134 LEARVLLIGA-GGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPDVQVEAVQE 212 (376)
T ss_pred hcCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCCCEEEEEec
Confidence 4589999987 8899999999999997 788887762 1111 1 112333 34444
Q ss_pred CCCCHHHHHHHhcCccEEEECCcch-----HhhhhhhcCCCEEEEEcc
Q 021928 149 DASNKKFLKTALRGVRSIICPSEGF-----ISNAGSLKGVQHVILLSQ 191 (305)
Q Consensus 149 D~~d~~~~~~~~~~~d~Vi~~~~g~-----~~~~a~~~gv~~~V~iSS 191 (305)
.+. .+.+...++++|.||.+.... +.+++.+.+++ +|+.+.
T Consensus 213 ~~~-~~~~~~~~~~~D~Vv~~~d~~~~r~~ln~~~~~~~ip-~i~~~~ 258 (376)
T PRK08762 213 RVT-SDNVEALLQDVDVVVDGADNFPTRYLLNDACVKLGKP-LVYGAV 258 (376)
T ss_pred cCC-hHHHHHHHhCCCEEEECCCCHHHHHHHHHHHHHcCCC-EEEEEe
Confidence 443 356778889999999885432 45667777765 455543
|
|
| >PRK05597 molybdopterin biosynthesis protein MoeB; Validated | Back alignment and domain information |
|---|
Probab=96.63 E-value=0.019 Score=54.26 Aligned_cols=92 Identities=21% Similarity=0.168 Sum_probs=62.1
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcch-------------------h------hhhcCC--CcEEee
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRN-------------------A------MESFGT--YVESMA 147 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~-------------------~------~~~~~~--~v~~v~ 147 (305)
....+|+|.|+ |++|+++++.|+..|. ++.+++.+.-. . .....+ .++.+.
T Consensus 26 L~~~~VlivG~-GGlGs~~a~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~v~~~~ 104 (355)
T PRK05597 26 LFDAKVAVIGA-GGLGSPALLYLAGAGVGHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLALNPDVKVTVSV 104 (355)
T ss_pred HhCCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHHCCCcEEEEEE
Confidence 34589999998 8999999999999996 77777665311 0 001223 344455
Q ss_pred cCCCCHHHHHHHhcCccEEEECCcch-----HhhhhhhcCCCEEEEEc
Q 021928 148 GDASNKKFLKTALRGVRSIICPSEGF-----ISNAGSLKGVQHVILLS 190 (305)
Q Consensus 148 ~D~~d~~~~~~~~~~~d~Vi~~~~g~-----~~~~a~~~gv~~~V~iS 190 (305)
..++ .+...+.++++|+||.+.... +.++|.+.+++ +|+.+
T Consensus 105 ~~i~-~~~~~~~~~~~DvVvd~~d~~~~r~~~n~~c~~~~ip-~v~~~ 150 (355)
T PRK05597 105 RRLT-WSNALDELRDADVILDGSDNFDTRHLASWAAARLGIP-HVWAS 150 (355)
T ss_pred eecC-HHHHHHHHhCCCEEEECCCCHHHHHHHHHHHHHcCCC-EEEEE
Confidence 5554 356677889999999885543 45667777765 44443
|
|
| >cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase | Back alignment and domain information |
|---|
Probab=96.62 E-value=0.0087 Score=50.48 Aligned_cols=55 Identities=16% Similarity=0.181 Sum_probs=46.0
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEECC
Q 021928 95 PEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS 170 (305)
Q Consensus 95 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~ 170 (305)
+..+++|+|.|+.+.+|..+++.|.++|.+|.++.|+. +.+.+.+..+|+||.+.
T Consensus 41 ~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~---------------------~~l~~~l~~aDiVIsat 95 (168)
T cd01080 41 DLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKT---------------------KNLKEHTKQADIVIVAV 95 (168)
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCc---------------------hhHHHHHhhCCEEEEcC
Confidence 34569999999966789999999999999999888863 35667888999999883
|
NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a |
| >PRK08328 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.62 E-value=0.027 Score=49.97 Aligned_cols=95 Identities=19% Similarity=0.307 Sum_probs=62.4
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcch----------------h----------hhhcCC--CcEEee
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRN----------------A----------MESFGT--YVESMA 147 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~----------------~----------~~~~~~--~v~~v~ 147 (305)
...+|+|.|+ |++|+++++.|+..|. ++++++.+.-. . ...+.+ .++.+.
T Consensus 26 ~~~~VlIiG~-GGlGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~~k~~~a~~~l~~~np~v~v~~~~ 104 (231)
T PRK08328 26 KKAKVAVVGV-GGLGSPVAYYLAAAGVGRILLIDEQTPELSNLNRQILHWEEDLGKNPKPLSAKWKLERFNSDIKIETFV 104 (231)
T ss_pred hCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCccChhhhccccccChhhcCchHHHHHHHHHHHHhCCCCEEEEEe
Confidence 4589999998 8999999999999996 67777544211 0 011122 334444
Q ss_pred cCCCCHHHHHHHhcCccEEEECCcch-----HhhhhhhcCCCEEEEEccccc
Q 021928 148 GDASNKKFLKTALRGVRSIICPSEGF-----ISNAGSLKGVQHVILLSQLSV 194 (305)
Q Consensus 148 ~D~~d~~~~~~~~~~~d~Vi~~~~g~-----~~~~a~~~gv~~~V~iSS~~~ 194 (305)
..+ +.+.+.+.++++|.||.+.... +.++|++.+++ +|+.+..+.
T Consensus 105 ~~~-~~~~~~~~l~~~D~Vid~~d~~~~r~~l~~~~~~~~ip-~i~g~~~g~ 154 (231)
T PRK08328 105 GRL-SEENIDEVLKGVDVIVDCLDNFETRYLLDDYAHKKGIP-LVHGAVEGT 154 (231)
T ss_pred ccC-CHHHHHHHHhcCCEEEECCCCHHHHHHHHHHHHHcCCC-EEEEeeccC
Confidence 445 3456778899999999884432 45667788865 555555443
|
|
| >COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only] | Back alignment and domain information |
|---|
Probab=96.59 E-value=0.014 Score=54.55 Aligned_cols=95 Identities=14% Similarity=0.132 Sum_probs=59.8
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCC---HHHHHHHhc--CccEEEECCc
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASN---KKFLKTALR--GVRSIICPSE 171 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d---~~~~~~~~~--~~d~Vi~~~~ 171 (305)
++.+|||+||+|++|...++.+...|+.+++.+.+.++...........+ .|..+ .+.+++... ++|+|+...+
T Consensus 142 ~g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~~~~~lGAd~v-i~y~~~~~~~~v~~~t~g~gvDvv~D~vG 220 (326)
T COG0604 142 PGETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLELLKELGADHV-INYREEDFVEQVRELTGGKGVDVVLDTVG 220 (326)
T ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHhcCCCEE-EcCCcccHHHHHHHHcCCCCceEEEECCC
Confidence 47999999999999999999999999777777666655432222122221 22333 244455554 5899998855
Q ss_pred ch-Hhhhhh--hcCCCEEEEEcccc
Q 021928 172 GF-ISNAGS--LKGVQHVILLSQLS 193 (305)
Q Consensus 172 g~-~~~~a~--~~gv~~~V~iSS~~ 193 (305)
+. +.+..+ ..+ .+++.+...+
T Consensus 221 ~~~~~~~l~~l~~~-G~lv~ig~~~ 244 (326)
T COG0604 221 GDTFAASLAALAPG-GRLVSIGALS 244 (326)
T ss_pred HHHHHHHHHHhccC-CEEEEEecCC
Confidence 43 333222 223 6888876654
|
|
| >cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA | Back alignment and domain information |
|---|
Probab=96.59 E-value=0.019 Score=50.75 Aligned_cols=92 Identities=14% Similarity=0.182 Sum_probs=60.9
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcch-------------------h------hhhcCC--CcEEeec
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRN-------------------A------MESFGT--YVESMAG 148 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~-------------------~------~~~~~~--~v~~v~~ 148 (305)
...+|+|.|+ |++|+++++.|+..|. ++.+++.+.-. . .....+ +++.+..
T Consensus 20 ~~~~VlivG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i~~~~~ 98 (228)
T cd00757 20 KNARVLVVGA-GGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDVEIEAYNE 98 (228)
T ss_pred hCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCCEEEEecc
Confidence 4589999997 8999999999999996 66666443211 0 001122 3455555
Q ss_pred CCCCHHHHHHHhcCccEEEECCcch-----HhhhhhhcCCCEEEEEcc
Q 021928 149 DASNKKFLKTALRGVRSIICPSEGF-----ISNAGSLKGVQHVILLSQ 191 (305)
Q Consensus 149 D~~d~~~~~~~~~~~d~Vi~~~~g~-----~~~~a~~~gv~~~V~iSS 191 (305)
++ +.+.+.+.++++|+||.+.+.. +.+.+.+.+++ +|+.+.
T Consensus 99 ~i-~~~~~~~~~~~~DvVi~~~d~~~~r~~l~~~~~~~~ip-~i~~g~ 144 (228)
T cd00757 99 RL-DAENAEELIAGYDLVLDCTDNFATRYLINDACVKLGKP-LVSGAV 144 (228)
T ss_pred ee-CHHHHHHHHhCCCEEEEcCCCHHHHHHHHHHHHHcCCC-EEEEEe
Confidence 55 3466778889999999884432 55667777764 555543
|
Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1). |
| >PRK08306 dipicolinate synthase subunit A; Reviewed | Back alignment and domain information |
|---|
Probab=96.57 E-value=0.012 Score=54.27 Aligned_cols=70 Identities=10% Similarity=0.023 Sum_probs=53.2
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEECCcc
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG 172 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~g 172 (305)
.+++|+|+|+ |.+|+.+++.|...|.+|.+..|++++.......+.+++ +.+.+.+.+.++|+||.+.+.
T Consensus 151 ~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~~~~~~G~~~~-----~~~~l~~~l~~aDiVI~t~p~ 220 (296)
T PRK08306 151 HGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAHLARITEMGLSPF-----HLSELAEEVGKIDIIFNTIPA 220 (296)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCeee-----cHHHHHHHhCCCCEEEECCCh
Confidence 5699999997 889999999999999999999999765332222223332 235667888999999988553
|
|
| >PRK05690 molybdopterin biosynthesis protein MoeB; Provisional | Back alignment and domain information |
|---|
Probab=96.53 E-value=0.027 Score=50.41 Aligned_cols=92 Identities=11% Similarity=0.096 Sum_probs=61.0
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcch-------------------h------hhhcCC--CcEEeec
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRN-------------------A------MESFGT--YVESMAG 148 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~-------------------~------~~~~~~--~v~~v~~ 148 (305)
...+|+|.|+ |++|+++++.|+..|. ++++++.+.-. . .....+ +++.+..
T Consensus 31 ~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~Ka~~a~~~l~~lnp~v~i~~~~~ 109 (245)
T PRK05690 31 KAARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFDTVSLSNLQRQVLHDDATIGQPKVESARAALARINPHIAIETINA 109 (245)
T ss_pred cCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEECcchhhhhhcCChhhCCChHHHHHHHHHHHHCCCCEEEEEec
Confidence 4589999998 9999999999999996 67776544211 0 001123 3444444
Q ss_pred CCCCHHHHHHHhcCccEEEECCcch-----HhhhhhhcCCCEEEEEcc
Q 021928 149 DASNKKFLKTALRGVRSIICPSEGF-----ISNAGSLKGVQHVILLSQ 191 (305)
Q Consensus 149 D~~d~~~~~~~~~~~d~Vi~~~~g~-----~~~~a~~~gv~~~V~iSS 191 (305)
.+. .+.+.+.++++|.||.+.... +.+++.+.+++ +|+.+.
T Consensus 110 ~i~-~~~~~~~~~~~DiVi~~~D~~~~r~~ln~~~~~~~ip-~v~~~~ 155 (245)
T PRK05690 110 RLD-DDELAALIAGHDLVLDCTDNVATRNQLNRACFAAKKP-LVSGAA 155 (245)
T ss_pred cCC-HHHHHHHHhcCCEEEecCCCHHHHHHHHHHHHHhCCE-EEEeee
Confidence 454 456778899999999885432 55667777764 555443
|
|
| >PRK08057 cobalt-precorrin-6x reductase; Reviewed | Back alignment and domain information |
|---|
Probab=96.53 E-value=0.026 Score=50.62 Aligned_cols=90 Identities=16% Similarity=0.100 Sum_probs=68.9
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhc--CccEEEECCcc--
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--GVRSIICPSEG-- 172 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~--~~d~Vi~~~~g-- 172 (305)
++++|||.|||+ =|+.+++.|.++|++|++.+-...... ....+.++.+-+.|.+.+...++ ++++||.++-.
T Consensus 1 ~~~~IlvlgGT~-egr~la~~L~~~g~~v~~Svat~~g~~--~~~~~~v~~G~l~~~~~l~~~l~~~~i~~VIDATHPfA 77 (248)
T PRK08057 1 MMPRILLLGGTS-EARALARALAAAGVDIVLSLAGRTGGP--ADLPGPVRVGGFGGAEGLAAYLREEGIDLVIDATHPYA 77 (248)
T ss_pred CCceEEEEechH-HHHHHHHHHHhCCCeEEEEEccCCCCc--ccCCceEEECCCCCHHHHHHHHHHCCCCEEEECCCccH
Confidence 468999999987 599999999999998887665553331 12357888898889899999996 68999987432
Q ss_pred -----hHhhhhhhcCCCEEEEE
Q 021928 173 -----FISNAGSLKGVQHVILL 189 (305)
Q Consensus 173 -----~~~~~a~~~gv~~~V~i 189 (305)
...++|++.+++.+=|.
T Consensus 78 ~~is~~a~~ac~~~~ipyiR~e 99 (248)
T PRK08057 78 AQISANAAAACRALGIPYLRLE 99 (248)
T ss_pred HHHHHHHHHHHHHhCCcEEEEe
Confidence 35667888888766654
|
|
| >PRK11863 N-acetyl-gamma-glutamyl-phosphate reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.51 E-value=0.012 Score=54.58 Aligned_cols=79 Identities=15% Similarity=0.089 Sum_probs=51.5
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEECCcch--
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEGF-- 173 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~g~-- 173 (305)
++.+|.|.||||++|.++++.|.+..+ ++..+..+..+ |+.+ ....+.++|+||++.+..
T Consensus 1 ~~~~VaIvGAtGy~G~eLlrlL~~hp~~~l~~~~s~~~~--------------~~~~---~~~~~~~~DvvFlalp~~~s 63 (313)
T PRK11863 1 MKPKVFIDGEAGTTGLQIRERLAGRSDIELLSIPEAKRK--------------DAAA---RRELLNAADVAILCLPDDAA 63 (313)
T ss_pred CCcEEEEECCCCHHHHHHHHHHhcCCCeEEEEEecCCCC--------------cccC---chhhhcCCCEEEECCCHHHH
Confidence 457999999999999999999988874 66666544321 1111 224567899999985532
Q ss_pred --HhhhhhhcCCCEEEEEcccc
Q 021928 174 --ISNAGSLKGVQHVILLSQLS 193 (305)
Q Consensus 174 --~~~~a~~~gv~~~V~iSS~~ 193 (305)
+...+.+.|+ ++|=.|+..
T Consensus 64 ~~~~~~~~~~g~-~VIDlSadf 84 (313)
T PRK11863 64 REAVALIDNPAT-RVIDASTAH 84 (313)
T ss_pred HHHHHHHHhCCC-EEEECChhh
Confidence 2333334454 566666653
|
|
| >cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase | Back alignment and domain information |
|---|
Probab=96.50 E-value=0.014 Score=50.68 Aligned_cols=106 Identities=10% Similarity=0.059 Sum_probs=64.4
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCC-CcEEeecCCCCHHHHHHHh-cCccEEEEC-Ccch
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGT-YVESMAGDASNKKFLKTAL-RGVRSIICP-SEGF 173 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~-~v~~v~~D~~d~~~~~~~~-~~~d~Vi~~-~~g~ 173 (305)
.+|+|+|+|. |.+|+.+++.|.+.|++|++.+++++...+.... +.+.+ |. + +.+ ..+|+++.+ .++.
T Consensus 27 ~gk~v~I~G~-G~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~~g~~~v--~~---~---~l~~~~~Dv~vp~A~~~~ 97 (200)
T cd01075 27 EGKTVAVQGL-GKVGYKLAEHLLEEGAKLIVADINEEAVARAAELFGATVV--AP---E---EIYSVDADVFAPCALGGV 97 (200)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcCCEEE--cc---h---hhccccCCEEEecccccc
Confidence 4589999998 7999999999999999999888887654332111 22322 21 2 223 279999955 3332
Q ss_pred -HhhhhhhcCCCEEEEEcccccccCCCCcccccchHHHHHHHHHHHHHHhCCCCEE
Q 021928 174 -ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMASGIPYT 228 (305)
Q Consensus 174 -~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~~~~~~aE~~l~~~gi~~t 228 (305)
..+.+++.+++.++ -..- . ++.. ..+++.|++.|+.|.
T Consensus 98 I~~~~~~~l~~~~v~-~~AN-------~--~~~~-------~~~~~~L~~~Gi~~~ 136 (200)
T cd01075 98 INDDTIPQLKAKAIA-GAAN-------N--QLAD-------PRHGQMLHERGILYA 136 (200)
T ss_pred cCHHHHHHcCCCEEE-ECCc-------C--ccCC-------HhHHHHHHHCCCEEe
Confidence 23334555665433 2211 1 1110 135678889888764
|
Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc |
| >PRK08644 thiamine biosynthesis protein ThiF; Provisional | Back alignment and domain information |
|---|
Probab=96.50 E-value=0.027 Score=49.27 Aligned_cols=93 Identities=10% Similarity=0.157 Sum_probs=60.7
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCc---ch---------------h------hhhcCC--CcEEeecC
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDK---RN---------------A------MESFGT--YVESMAGD 149 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~---~~---------------~------~~~~~~--~v~~v~~D 149 (305)
...+|+|.|+ |++|+++++.|+..|. ++++++.+. +. . ...+.+ .++.+...
T Consensus 27 ~~~~V~ViG~-GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~dvG~~Ka~~a~~~l~~lnp~v~v~~~~~~ 105 (212)
T PRK08644 27 KKAKVGIAGA-GGLGSNIAVALARSGVGNLKLVDFDVVEPSNLNRQQYFISQIGMPKVEALKENLLEINPFVEIEAHNEK 105 (212)
T ss_pred hCCCEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCEeccccccccEeehhhCCChHHHHHHHHHHHHCCCCEEEEEeee
Confidence 4589999997 9999999999999996 588877662 11 0 011123 34444445
Q ss_pred CCCHHHHHHHhcCccEEEECCcch-----Hhhhhhhc-CCCEEEEEccc
Q 021928 150 ASNKKFLKTALRGVRSIICPSEGF-----ISNAGSLK-GVQHVILLSQL 192 (305)
Q Consensus 150 ~~d~~~~~~~~~~~d~Vi~~~~g~-----~~~~a~~~-gv~~~V~iSS~ 192 (305)
+.+ +.+.+.++++|+||.+.... +.+.+.+. ++ .+|+.+..
T Consensus 106 i~~-~~~~~~~~~~DvVI~a~D~~~~r~~l~~~~~~~~~~-p~I~~~~~ 152 (212)
T PRK08644 106 IDE-DNIEELFKDCDIVVEAFDNAETKAMLVETVLEHPGK-KLVAASGM 152 (212)
T ss_pred cCH-HHHHHHHcCCCEEEECCCCHHHHHHHHHHHHHhCCC-CEEEeehh
Confidence 544 55677889999999774432 44556665 64 45555543
|
|
| >PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3 | Back alignment and domain information |
|---|
Probab=96.49 E-value=0.012 Score=49.19 Aligned_cols=111 Identities=16% Similarity=0.099 Sum_probs=67.7
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEECCcch---
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEGF--- 173 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~g~--- 173 (305)
.+|+++|+|- |.+|+.+++.|...|.+|++...+|-++.+..-+++++. .+.+++...|.+|.+++..
T Consensus 22 ~Gk~vvV~GY-G~vG~g~A~~lr~~Ga~V~V~e~DPi~alqA~~dGf~v~--------~~~~a~~~adi~vtaTG~~~vi 92 (162)
T PF00670_consen 22 AGKRVVVIGY-GKVGKGIARALRGLGARVTVTEIDPIRALQAAMDGFEVM--------TLEEALRDADIFVTATGNKDVI 92 (162)
T ss_dssp TTSEEEEE---SHHHHHHHHHHHHTT-EEEEE-SSHHHHHHHHHTT-EEE---------HHHHTTT-SEEEE-SSSSSSB
T ss_pred CCCEEEEeCC-CcccHHHHHHHhhCCCEEEEEECChHHHHHhhhcCcEec--------CHHHHHhhCCEEEECCCCcccc
Confidence 4699999996 999999999999999999999999987665554555543 3567889999999885542
Q ss_pred HhhhhhhcCCCEEEEEcccccccCCCCcccccchHHHHHHHHHHHHHHhCCCCEEEEecCC
Q 021928 174 ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMASGIPYTIIRTGV 234 (305)
Q Consensus 174 ~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~~~~~~aE~~l~~~gi~~tilRPg~ 234 (305)
..+-..+.+-.-|+ . ..+..+..-. -.+|.+..+...-+||..
T Consensus 93 ~~e~~~~mkdgail-~-n~Gh~d~Eid----------------~~~L~~~~~~~~~v~~~v 135 (162)
T PF00670_consen 93 TGEHFRQMKDGAIL-A-NAGHFDVEID----------------VDALEANAVEREEVRPQV 135 (162)
T ss_dssp -HHHHHHS-TTEEE-E-ESSSSTTSBT----------------HHHHHTCTSEEEEEETTE
T ss_pred CHHHHHHhcCCeEE-e-ccCcCceeEe----------------eccccccCcEEEEcCCCe
Confidence 12333333333443 2 2222111100 134566678888888865
|
3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C .... |
| >PRK08223 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=96.48 E-value=0.025 Score=51.67 Aligned_cols=94 Identities=13% Similarity=0.148 Sum_probs=62.9
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcch----------------------h---hhhcCC--CcEEee
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRN----------------------A---MESFGT--YVESMA 147 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~----------------------~---~~~~~~--~v~~v~ 147 (305)
....+|+|.|+ |++|+.++..|+..|. ++.+++.+.-. + ...+.+ +++.+.
T Consensus 25 L~~s~VlIvG~-GGLGs~va~~LA~aGVG~i~lvD~D~Ve~SNLnRQ~l~~~~diG~~Kve~a~~~l~~iNP~v~V~~~~ 103 (287)
T PRK08223 25 LRNSRVAIAGL-GGVGGIHLLTLARLGIGKFTIADFDVFELRNFNRQAGAMMSTLGRPKAEVLAEMVRDINPELEIRAFP 103 (287)
T ss_pred HhcCCEEEECC-CHHHHHHHHHHHHhCCCeEEEEeCCCcchhccccccCcChhHCCCcHHHHHHHHHHHHCCCCEEEEEe
Confidence 34589999998 8899999999999996 67777654211 0 011223 344455
Q ss_pred cCCCCHHHHHHHhcCccEEEECCcch-------HhhhhhhcCCCEEEEEccc
Q 021928 148 GDASNKKFLKTALRGVRSIICPSEGF-------ISNAGSLKGVQHVILLSQL 192 (305)
Q Consensus 148 ~D~~d~~~~~~~~~~~d~Vi~~~~g~-------~~~~a~~~gv~~~V~iSS~ 192 (305)
..++. +.+.+.++++|.|+.+.+.+ +.++|.+.+++ +|+.+..
T Consensus 104 ~~l~~-~n~~~ll~~~DlVvD~~D~~~~~~r~~ln~~c~~~~iP-~V~~~~~ 153 (287)
T PRK08223 104 EGIGK-ENADAFLDGVDVYVDGLDFFEFDARRLVFAACQQRGIP-ALTAAPL 153 (287)
T ss_pred cccCc-cCHHHHHhCCCEEEECCCCCcHHHHHHHHHHHHHcCCC-EEEEecc
Confidence 55543 56778899999999775431 45678888875 4555443
|
|
| >PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated | Back alignment and domain information |
|---|
Probab=96.48 E-value=0.023 Score=54.46 Aligned_cols=92 Identities=16% Similarity=0.132 Sum_probs=60.4
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcch----------------------hh---hhcCCC--cEEeec
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRN----------------------AM---ESFGTY--VESMAG 148 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~----------------------~~---~~~~~~--v~~v~~ 148 (305)
...+|+|.|+ |++|+++++.|+..|. ++.+++.+.-. +. ....+. ++.+..
T Consensus 41 ~~~~VlviG~-GGlGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~i~~~~~ 119 (392)
T PRK07878 41 KNARVLVIGA-GGLGSPTLLYLAAAGVGTLGIVEFDVVDESNLQRQVIHGQSDVGRSKAQSARDSIVEINPLVNVRLHEF 119 (392)
T ss_pred hcCCEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCEecCcccccccccChhcCCChHHHHHHHHHHHhCCCcEEEEEec
Confidence 4589999998 8899999999999996 66666544211 00 011233 444555
Q ss_pred CCCCHHHHHHHhcCccEEEECCcch-----HhhhhhhcCCCEEEEEcc
Q 021928 149 DASNKKFLKTALRGVRSIICPSEGF-----ISNAGSLKGVQHVILLSQ 191 (305)
Q Consensus 149 D~~d~~~~~~~~~~~d~Vi~~~~g~-----~~~~a~~~gv~~~V~iSS 191 (305)
.++. +...+.++++|+||.+.... +.++|.+.+++ +|+.+.
T Consensus 120 ~i~~-~~~~~~~~~~D~Vvd~~d~~~~r~~ln~~~~~~~~p-~v~~~~ 165 (392)
T PRK07878 120 RLDP-SNAVELFSQYDLILDGTDNFATRYLVNDAAVLAGKP-YVWGSI 165 (392)
T ss_pred cCCh-hHHHHHHhcCCEEEECCCCHHHHHHHHHHHHHcCCC-EEEEEe
Confidence 5543 55678899999999885433 45667777765 444433
|
|
| >cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like | Back alignment and domain information |
|---|
Probab=96.47 E-value=0.031 Score=48.39 Aligned_cols=97 Identities=10% Similarity=0.203 Sum_probs=62.9
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcch---h------------------------hhhcCC--CcEEe
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRN---A------------------------MESFGT--YVESM 146 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~---~------------------------~~~~~~--~v~~v 146 (305)
...+|+|.|+ |++|.++++.|+..|. ++++++.+.-. . .....+ +++.+
T Consensus 18 ~~s~VlviG~-gglGsevak~L~~~GVg~i~lvD~d~ve~snl~rq~~~~~~~~~iG~~Ka~~~~~~L~~lNp~v~i~~~ 96 (198)
T cd01485 18 RSAKVLIIGA-GALGAEIAKNLVLAGIDSITIVDHRLVSTEDLGSNFFLDAEVSNSGMNRAAASYEFLQELNPNVKLSIV 96 (198)
T ss_pred hhCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEECCcCChhcCcccEecccchhhcCchHHHHHHHHHHHHCCCCEEEEE
Confidence 3589999998 5599999999999996 67777644210 0 011223 34444
Q ss_pred ecCCCC-HHHHHHHhcCccEEEECCcch-----HhhhhhhcCCCEEEEEcccccc
Q 021928 147 AGDASN-KKFLKTALRGVRSIICPSEGF-----ISNAGSLKGVQHVILLSQLSVY 195 (305)
Q Consensus 147 ~~D~~d-~~~~~~~~~~~d~Vi~~~~g~-----~~~~a~~~gv~~~V~iSS~~~~ 195 (305)
..++.+ .+.....+..+|+||.+.... +.+.+++.+++ +|+.++.+.+
T Consensus 97 ~~~~~~~~~~~~~~~~~~dvVi~~~d~~~~~~~ln~~c~~~~ip-~i~~~~~G~~ 150 (198)
T cd01485 97 EEDSLSNDSNIEEYLQKFTLVIATEENYERTAKVNDVCRKHHIP-FISCATYGLI 150 (198)
T ss_pred ecccccchhhHHHHHhCCCEEEECCCCHHHHHHHHHHHHHcCCC-EEEEEeecCE
Confidence 445542 455667788999999884322 55678888874 6666665444
|
E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol |
| >PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional | Back alignment and domain information |
|---|
Probab=96.47 E-value=0.0087 Score=60.73 Aligned_cols=73 Identities=16% Similarity=0.193 Sum_probs=61.3
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHH-HhcCccEEEECCc
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKT-ALRGVRSIICPSE 171 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~-~~~~~d~Vi~~~~ 171 (305)
.++|+|.|. |-+|+.+++.|.++|+++++++.+++.....-..+..++.+|.+|++.+++ -++.++.+|.+.+
T Consensus 400 ~~~vII~G~-Gr~G~~va~~L~~~g~~vvvID~d~~~v~~~~~~g~~v~~GDat~~~~L~~agi~~A~~vvv~~~ 473 (621)
T PRK03562 400 QPRVIIAGF-GRFGQIVGRLLLSSGVKMTVLDHDPDHIETLRKFGMKVFYGDATRMDLLESAGAAKAEVLINAID 473 (621)
T ss_pred cCcEEEEec-ChHHHHHHHHHHhCCCCEEEEECCHHHHHHHHhcCCeEEEEeCCCHHHHHhcCCCcCCEEEEEeC
Confidence 579999997 999999999999999999999999887554444568999999999988875 4567899997743
|
|
| >PRK08655 prephenate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.36 E-value=0.0069 Score=58.85 Aligned_cols=66 Identities=15% Similarity=0.083 Sum_probs=48.0
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcC-CCcEEeecCCCCHHHHHHHhcCccEEEECCc
Q 021928 99 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG-TYVESMAGDASNKKFLKTALRGVRSIICPSE 171 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~-~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~ 171 (305)
|+|+|+||.|.+|..+++.|.+.|++|++..|+++...+... .++.+ . ....+++.++|+||.+.+
T Consensus 1 MkI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a~~~gv~~-----~--~~~~e~~~~aDvVIlavp 67 (437)
T PRK08655 1 MKISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEVAKELGVEY-----A--NDNIDAAKDADIVIISVP 67 (437)
T ss_pred CEEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHcCCee-----c--cCHHHHhccCCEEEEecC
Confidence 589999999999999999999999999999998765322111 12221 1 223456778899998744
|
|
| >cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase | Back alignment and domain information |
|---|
Probab=96.36 E-value=0.025 Score=52.52 Aligned_cols=96 Identities=10% Similarity=0.028 Sum_probs=58.9
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcC-CCcEEeecCCC---C-HHHHHHHh-cCccEEEEC
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG-TYVESMAGDAS---N-KKFLKTAL-RGVRSIICP 169 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~-~~v~~v~~D~~---d-~~~~~~~~-~~~d~Vi~~ 169 (305)
.++.+|+|+||+|.+|..+++.+...|.+|+++++++++...... -++..+ .|.. + .+.+.+.. .++|+|+.+
T Consensus 150 ~~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~lGa~~v-i~~~~~~~~~~~i~~~~~~gvd~v~d~ 228 (338)
T cd08295 150 KKGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNKLGFDDA-FNYKEEPDLDAALKRYFPNGIDIYFDN 228 (338)
T ss_pred CCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCcee-EEcCCcccHHHHHHHhCCCCcEEEEEC
Confidence 346899999999999999999888999999999988766433211 122222 2221 2 12233322 478999987
Q ss_pred Ccch-Hhhhhhh-cCCCEEEEEccc
Q 021928 170 SEGF-ISNAGSL-KGVQHVILLSQL 192 (305)
Q Consensus 170 ~~g~-~~~~a~~-~gv~~~V~iSS~ 192 (305)
.++. +.+..+. ..-.++|.++..
T Consensus 229 ~g~~~~~~~~~~l~~~G~iv~~G~~ 253 (338)
T cd08295 229 VGGKMLDAVLLNMNLHGRIAACGMI 253 (338)
T ss_pred CCHHHHHHHHHHhccCcEEEEeccc
Confidence 5543 2222222 123478877643
|
This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in |
| >TIGR00978 asd_EA aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms) | Back alignment and domain information |
|---|
Probab=96.35 E-value=0.017 Score=54.31 Aligned_cols=88 Identities=16% Similarity=0.110 Sum_probs=52.2
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCC-CeEEEEEcCcchhhhhcCCC------------c-EEeecCCCCHHHHHHHhcCcc
Q 021928 99 DAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAMESFGTY------------V-ESMAGDASNKKFLKTALRGVR 164 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~R~~~~~~~~~~~~------------v-~~v~~D~~d~~~~~~~~~~~d 164 (305)
++|.|+||+|++|+++++.|.... .+|..+.++.......+... . ....-++ +.+ .+.++|
T Consensus 1 ~kVaIvGatG~~G~~L~~~l~~~~~~~l~~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~----~~~~~D 75 (341)
T TIGR00978 1 MRVAVLGATGLVGQKFVKLLAKHPYFELAKVVASPRSAGKRYGEAVKWIEPGDMPEYVRDLPIVEP-EPV----ASKDVD 75 (341)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCceEEEEEEChhhcCCcchhhccccccCCCccccceeEEEeC-CHH----HhccCC
Confidence 479999999999999999998876 58888865443221111100 0 1011111 222 357899
Q ss_pred EEEECCcch----HhhhhhhcCCCEEEEEccc
Q 021928 165 SIICPSEGF----ISNAGSLKGVQHVILLSQL 192 (305)
Q Consensus 165 ~Vi~~~~g~----~~~~a~~~gv~~~V~iSS~ 192 (305)
.|+.+.+.. +...+.+.|++ +|..|+.
T Consensus 76 vVf~a~p~~~s~~~~~~~~~~G~~-VIDlsg~ 106 (341)
T TIGR00978 76 IVFSALPSEVAEEVEPKLAEAGKP-VFSNASN 106 (341)
T ss_pred EEEEeCCHHHHHHHHHHHHHCCCE-EEECChh
Confidence 999885432 34445566775 4444443
|
Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. Separate models are built for the two types in order to exclude the USG-1 protein, found in several species, which is specifically related to the Bacillus subtilis type of aspartate-semialdehyde dehydrogenase. Members of this type are found primarily in organisms that lack peptidoglycan. |
| >TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type | Back alignment and domain information |
|---|
Probab=96.35 E-value=0.0087 Score=54.70 Aligned_cols=71 Identities=7% Similarity=-0.026 Sum_probs=50.0
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcchhhhhcC---CCcEEeecCCCCHHHHHHHhcCccEEEECC
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFG---TYVESMAGDASNKKFLKTALRGVRSIICPS 170 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~---~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~ 170 (305)
..++++|.|| |+.|+.++..|++.|. +|+++.|+.+++.+... ....... +...+.+...+.++|.||+++
T Consensus 124 ~~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~--~~~~~~~~~~~~~~DiVInaT 198 (282)
T TIGR01809 124 AGFRGLVIGA-GGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVITR--LEGDSGGLAIEKAAEVLVSTV 198 (282)
T ss_pred CCceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCccee--ccchhhhhhcccCCCEEEECC
Confidence 4589999997 9999999999999996 79999999877544321 1111111 222234455667899999883
|
This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway. |
| >PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain | Back alignment and domain information |
|---|
Probab=96.34 E-value=0.0078 Score=45.27 Aligned_cols=71 Identities=11% Similarity=0.125 Sum_probs=47.3
Q ss_pred EEEEEcCCChHHHHHHHHHHhCC---CeEEEE-EcCcchhhhhcCC-CcEEeecCCCCHHHHHHHhcCccEEEEC-Ccch
Q 021928 100 AVLVTDGDSDIGQMVILSLIVKR---TRIKAL-VKDKRNAMESFGT-YVESMAGDASNKKFLKTALRGVRSIICP-SEGF 173 (305)
Q Consensus 100 ~vlVtGatG~iG~~l~~~L~~~g---~~V~~~-~R~~~~~~~~~~~-~v~~v~~D~~d~~~~~~~~~~~d~Vi~~-~~g~ 173 (305)
+|.|.| +|.+|.++++.|++.| ++|... .|++++..+.... .+.+... +..++++.+|+||.+ -+..
T Consensus 1 kI~iIG-~G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~~~~~~~~------~~~~~~~~advvilav~p~~ 73 (96)
T PF03807_consen 1 KIGIIG-AGNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEYGVQATAD------DNEEAAQEADVVILAVKPQQ 73 (96)
T ss_dssp EEEEES-TSHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHCTTEEESE------EHHHHHHHTSEEEE-S-GGG
T ss_pred CEEEEC-CCHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhhccccccC------ChHHhhccCCEEEEEECHHH
Confidence 578886 5999999999999999 899966 8998875443221 1333222 234566689999988 4444
Q ss_pred Hhhh
Q 021928 174 ISNA 177 (305)
Q Consensus 174 ~~~~ 177 (305)
+.+.
T Consensus 74 ~~~v 77 (96)
T PF03807_consen 74 LPEV 77 (96)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 3333
|
It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D .... |
| >TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain | Back alignment and domain information |
|---|
Probab=96.34 E-value=0.02 Score=49.79 Aligned_cols=70 Identities=16% Similarity=0.164 Sum_probs=53.8
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchh-hhhc-CCCcEEeecCCCCHHHHHHHhcCccEEEECCc
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-MESF-GTYVESMAGDASNKKFLKTALRGVRSIICPSE 171 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~-~~~~-~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~ 171 (305)
..+++|+|.|| |.+|..-++.|++.|.+|++++.+.... .+.. ..+++++..++... .+.+++.||.+.+
T Consensus 7 l~gk~vlVvGg-G~va~rk~~~Ll~~ga~VtVvsp~~~~~l~~l~~~~~i~~~~~~~~~~-----dl~~~~lVi~at~ 78 (205)
T TIGR01470 7 LEGRAVLVVGG-GDVALRKARLLLKAGAQLRVIAEELESELTLLAEQGGITWLARCFDAD-----ILEGAFLVIAATD 78 (205)
T ss_pred cCCCeEEEECc-CHHHHHHHHHHHHCCCEEEEEcCCCCHHHHHHHHcCCEEEEeCCCCHH-----HhCCcEEEEECCC
Confidence 34589999998 9999999999999999999998765432 2222 23688988887632 3688999998744
|
This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms. |
| >PRK06719 precorrin-2 dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.33 E-value=0.019 Score=47.80 Aligned_cols=70 Identities=13% Similarity=0.161 Sum_probs=48.2
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEECCc
Q 021928 95 PEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE 171 (305)
Q Consensus 95 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~ 171 (305)
+..+++|+|.|| |.+|...++.|++.|++|++++.........+ ..+++..-.+.. .-++++|.||.+++
T Consensus 10 ~l~~~~vlVvGG-G~va~rka~~Ll~~ga~V~VIsp~~~~~l~~l-~~i~~~~~~~~~-----~dl~~a~lViaaT~ 79 (157)
T PRK06719 10 NLHNKVVVIIGG-GKIAYRKASGLKDTGAFVTVVSPEICKEMKEL-PYITWKQKTFSN-----DDIKDAHLIYAATN 79 (157)
T ss_pred EcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCccCHHHHhc-cCcEEEecccCh-----hcCCCceEEEECCC
Confidence 445699999998 99999999999999999998854332211112 234554444433 22678899998754
|
|
| >PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.32 E-value=0.011 Score=56.25 Aligned_cols=55 Identities=15% Similarity=0.266 Sum_probs=44.0
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEECCc
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE 171 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~ 171 (305)
..++|.|.||.|.+|..+++.|.+.|++|++..|+.. +...+++.++|.||.+.+
T Consensus 97 ~~~~I~IiGG~GlmG~slA~~l~~~G~~V~~~d~~~~--------------------~~~~~~~~~aDlVilavP 151 (374)
T PRK11199 97 DLRPVVIVGGKGQLGRLFAKMLTLSGYQVRILEQDDW--------------------DRAEDILADAGMVIVSVP 151 (374)
T ss_pred ccceEEEEcCCChhhHHHHHHHHHCCCeEEEeCCCcc--------------------hhHHHHHhcCCEEEEeCc
Confidence 4589999999999999999999999999999998531 123455677888887744
|
|
| >COG0002 ArgC Acetylglutamate semialdehyde dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.32 E-value=0.013 Score=54.56 Aligned_cols=92 Identities=11% Similarity=0.044 Sum_probs=54.5
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCC-CeEEEEEcCc--ch-hhhhcCCCcE-E--eecCCCCHHHHHHHhcCccEEEEC
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDK--RN-AMESFGTYVE-S--MAGDASNKKFLKTALRGVRSIICP 169 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~R~~--~~-~~~~~~~~v~-~--v~~D~~d~~~~~~~~~~~d~Vi~~ 169 (305)
++++|.|.||+|+.|.+|++.|+... .++...+.+. .+ ..+.++. .. . ......|.+.+ ..++||+||.+
T Consensus 1 ~~~kV~IvGasGYtG~EL~rlL~~Hp~ve~~~~ss~~~~g~~~~~~~p~-l~g~~~l~~~~~~~~~~--~~~~~DvvFla 77 (349)
T COG0002 1 MMIKVGIVGASGYTGLELLRLLAGHPDVELILISSRERAGKPVSDVHPN-LRGLVDLPFQTIDPEKI--ELDECDVVFLA 77 (349)
T ss_pred CCceEEEEcCCCCcHHHHHHHHhcCCCeEEEEeechhhcCCchHHhCcc-cccccccccccCChhhh--hcccCCEEEEe
Confidence 36899999999999999999999876 4766554433 22 2222221 11 1 12222233333 46679999998
Q ss_pred Cc-ch---HhhhhhhcCCCEEEEEccc
Q 021928 170 SE-GF---ISNAGSLKGVQHVILLSQL 192 (305)
Q Consensus 170 ~~-g~---~~~~a~~~gv~~~V~iSS~ 192 (305)
.+ +. +.......+++ +|=+|..
T Consensus 78 lPhg~s~~~v~~l~~~g~~-VIDLSad 103 (349)
T COG0002 78 LPHGVSAELVPELLEAGCK-VIDLSAD 103 (349)
T ss_pred cCchhHHHHHHHHHhCCCe-EEECCcc
Confidence 54 32 22233344554 7777765
|
|
| >PRK15116 sulfur acceptor protein CsdL; Provisional | Back alignment and domain information |
|---|
Probab=96.27 E-value=0.14 Score=46.48 Aligned_cols=95 Identities=11% Similarity=0.043 Sum_probs=60.2
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCC-CeEEEEEcCcch-------h---------------hh---hcCCCcEEeec-C
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRN-------A---------------ME---SFGTYVESMAG-D 149 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~R~~~~-------~---------------~~---~~~~~v~~v~~-D 149 (305)
...+|+|.|+ |++|+++++.|+..| -++++++.+.-. . .+ ...+.+++... +
T Consensus 29 ~~s~VlVvG~-GGVGs~vae~Lar~GVg~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~INP~~~V~~i~~ 107 (268)
T PRK15116 29 ADAHICVVGI-GGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRVTVVDD 107 (268)
T ss_pred cCCCEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHhHCCCcEEEEEec
Confidence 4589999997 899999999999999 478877655211 0 00 11233333322 2
Q ss_pred CCCHHHHHHHhc-CccEEEECCcc-----hHhhhhhhcCCCEEEEEcccc
Q 021928 150 ASNKKFLKTALR-GVRSIICPSEG-----FISNAGSLKGVQHVILLSQLS 193 (305)
Q Consensus 150 ~~d~~~~~~~~~-~~d~Vi~~~~g-----~~~~~a~~~gv~~~V~iSS~~ 193 (305)
..+.+.+.+.+. ++|.||.+.+. .+.+.|++.+++ ||.+...+
T Consensus 108 ~i~~e~~~~ll~~~~D~VIdaiD~~~~k~~L~~~c~~~~ip-~I~~gGag 156 (268)
T PRK15116 108 FITPDNVAEYMSAGFSYVIDAIDSVRPKAALIAYCRRNKIP-LVTTGGAG 156 (268)
T ss_pred ccChhhHHHHhcCCCCEEEEcCCCHHHHHHHHHHHHHcCCC-EEEECCcc
Confidence 334566666664 69999988543 256667777765 44444433
|
|
| >PRK06718 precorrin-2 dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.27 E-value=0.016 Score=50.26 Aligned_cols=71 Identities=7% Similarity=0.120 Sum_probs=50.8
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchh-hhhcC-CCcEEeecCCCCHHHHHHHhcCccEEEECCc
Q 021928 95 PEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-MESFG-TYVESMAGDASNKKFLKTALRGVRSIICPSE 171 (305)
Q Consensus 95 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~-~~~~~-~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~ 171 (305)
+..+++|+|.|| |.+|...++.|++.|++|+++.++.... .+... ..+.+..-++.. ..+.++|.||.+++
T Consensus 7 ~l~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~~~~~l~~l~~~~~i~~~~~~~~~-----~~l~~adlViaaT~ 79 (202)
T PRK06718 7 DLSNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPELTENLVKLVEEGKIRWKQKEFEP-----SDIVDAFLVIAATN 79 (202)
T ss_pred EcCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCCCHHHHHHHhCCCEEEEecCCCh-----hhcCCceEEEEcCC
Confidence 345699999998 9999999999999999999998765332 22222 235555544432 33678999988744
|
|
| >PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.26 E-value=0.012 Score=54.85 Aligned_cols=73 Identities=14% Similarity=0.073 Sum_probs=48.0
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcC--CCcEEeec-----CCCCHHHHHHHhcCccEEEECC
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG--TYVESMAG-----DASNKKFLKTALRGVRSIICPS 170 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~--~~v~~v~~-----D~~d~~~~~~~~~~~d~Vi~~~ 170 (305)
+|+|.|.|+ |-+|..++..|++.|++|++..|++++...... .+...+.+ .+.-.++..++++++|.|+.+.
T Consensus 4 ~m~I~iIG~-G~mG~~ia~~L~~~G~~V~~~~r~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~~~e~~~~aD~Vi~~v 82 (328)
T PRK14618 4 GMRVAVLGA-GAWGTALAVLAASKGVPVRLWARRPEFAAALAAERENREYLPGVALPAELYPTADPEEALAGADFAVVAV 82 (328)
T ss_pred CCeEEEECc-CHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhCcccccCCCCcCCCCeEEeCCHHHHHcCCCEEEEEC
Confidence 478999986 999999999999999999999998765322111 00000001 0111123445678899999874
Q ss_pred c
Q 021928 171 E 171 (305)
Q Consensus 171 ~ 171 (305)
+
T Consensus 83 ~ 83 (328)
T PRK14618 83 P 83 (328)
T ss_pred c
Confidence 3
|
|
| >TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase | Back alignment and domain information |
|---|
Probab=96.26 E-value=0.028 Score=51.86 Aligned_cols=96 Identities=13% Similarity=0.057 Sum_probs=58.6
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCC---HHH-HHHHh-cCccEEEECCc
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASN---KKF-LKTAL-RGVRSIICPSE 171 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d---~~~-~~~~~-~~~d~Vi~~~~ 171 (305)
++.+|||+||+|.+|..+++.+...|.+|+++++++++......-+++.+ .|..+ ... +.... +++|+|+.+.+
T Consensus 138 ~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~~~lGa~~v-i~~~~~~~~~~~~~~~~~~gvdvv~d~~G 216 (325)
T TIGR02825 138 GGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYLKKLGFDVA-FNYKTVKSLEETLKKASPDGYDCYFDNVG 216 (325)
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEE-EeccccccHHHHHHHhCCCCeEEEEECCC
Confidence 46899999999999999998888899999999988766432211122222 22222 222 22222 36899998755
Q ss_pred ch-Hhhhhhh-cCCCEEEEEcccc
Q 021928 172 GF-ISNAGSL-KGVQHVILLSQLS 193 (305)
Q Consensus 172 g~-~~~~a~~-~gv~~~V~iSS~~ 193 (305)
+. ...+.+. ..-.++|.++...
T Consensus 217 ~~~~~~~~~~l~~~G~iv~~G~~~ 240 (325)
T TIGR02825 217 GEFSNTVIGQMKKFGRIAICGAIS 240 (325)
T ss_pred HHHHHHHHHHhCcCcEEEEecchh
Confidence 43 2222221 2234788776543
|
Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase. |
| >COG0026 PurK Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.23 E-value=0.018 Score=53.87 Aligned_cols=68 Identities=13% Similarity=0.174 Sum_probs=56.4
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEE
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIIC 168 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~ 168 (305)
+++|.|.|| |.+|+.++..-...|++|+.+.-+++.......+ ..+..+..|.++++++.+.||+|-+
T Consensus 1 ~~tvgIlGG-GQLgrMm~~aa~~lG~~v~vLdp~~~~PA~~va~--~~i~~~~dD~~al~ela~~~DViT~ 68 (375)
T COG0026 1 MKTVGILGG-GQLGRMMALAAARLGIKVIVLDPDADAPAAQVAD--RVIVAAYDDPEALRELAAKCDVITY 68 (375)
T ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCEEEEecCCCCCchhhccc--ceeecCCCCHHHHHHHHhhCCEEEE
Confidence 479999998 9999999999999999999998777654333332 5677788899999999999998864
|
|
| >cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=96.23 E-value=0.045 Score=50.14 Aligned_cols=95 Identities=17% Similarity=0.128 Sum_probs=58.2
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCC-HHHHHHHhcCccEEEECCcch-H
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASN-KKFLKTALRGVRSIICPSEGF-I 174 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d-~~~~~~~~~~~d~Vi~~~~g~-~ 174 (305)
+..+++|+||+|.+|+.+++.+...|.+|+++++++++...........+ .|..+ .+.+.+. .++|.++.+.+.. .
T Consensus 162 ~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~d~v~~~~g~~~~ 239 (332)
T cd08259 162 KGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKILKELGADYV-IDGSKFSEDVKKL-GGADVVIELVGSPTI 239 (332)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHcCCcEE-EecHHHHHHHHhc-cCCCEEEECCChHHH
Confidence 45799999999999999999999999999999988755332211112111 12221 1223322 3789999875433 2
Q ss_pred hhhhhh-cCCCEEEEEcccc
Q 021928 175 SNAGSL-KGVQHVILLSQLS 193 (305)
Q Consensus 175 ~~~a~~-~gv~~~V~iSS~~ 193 (305)
..+.+. ..-.++|.++...
T Consensus 240 ~~~~~~~~~~g~~v~~g~~~ 259 (332)
T cd08259 240 EESLRSLNKGGRLVLIGNVT 259 (332)
T ss_pred HHHHHHhhcCCEEEEEcCCC
Confidence 222211 2334788776543
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. |
| >PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related | Back alignment and domain information |
|---|
Probab=96.19 E-value=0.012 Score=50.00 Aligned_cols=65 Identities=15% Similarity=0.004 Sum_probs=46.5
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEEC
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 169 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~ 169 (305)
..+++|.|.|. |.||+++++.|...|.+|++..|............+. ..++.++++.+|+|+++
T Consensus 34 l~g~tvgIiG~-G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~~~~~~--------~~~l~ell~~aDiv~~~ 98 (178)
T PF02826_consen 34 LRGKTVGIIGY-GRIGRAVARRLKAFGMRVIGYDRSPKPEEGADEFGVE--------YVSLDELLAQADIVSLH 98 (178)
T ss_dssp STTSEEEEEST-SHHHHHHHHHHHHTT-EEEEEESSCHHHHHHHHTTEE--------ESSHHHHHHH-SEEEE-
T ss_pred cCCCEEEEEEE-cCCcCeEeeeeecCCceeEEecccCChhhhcccccce--------eeehhhhcchhhhhhhh
Confidence 35699999996 9999999999999999999999998654311111111 13466788899999966
|
All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A .... |
| >PRK10537 voltage-gated potassium channel; Provisional | Back alignment and domain information |
|---|
Probab=96.19 E-value=0.045 Score=52.42 Aligned_cols=71 Identities=17% Similarity=0.247 Sum_probs=56.9
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHH-HhcCccEEEECCc
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKT-ALRGVRSIICPSE 171 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~-~~~~~d~Vi~~~~ 171 (305)
..+++|.|. |.+|+.++++|.++|++++++..+.. .+....+..++.+|.+|.+.+++ -++++++|+.+.+
T Consensus 240 k~HvII~G~-g~lg~~v~~~L~~~g~~vvVId~d~~--~~~~~~g~~vI~GD~td~e~L~~AgI~~A~aVI~~t~ 311 (393)
T PRK10537 240 KDHFIICGH-SPLAINTYLGLRQRGQAVTVIVPLGL--EHRLPDDADLIPGDSSDSAVLKKAGAARARAILALRD 311 (393)
T ss_pred CCeEEEECC-ChHHHHHHHHHHHCCCCEEEEECchh--hhhccCCCcEEEeCCCCHHHHHhcCcccCCEEEEcCC
Confidence 478999997 78999999999999999988886532 33344568899999999888876 4578899997743
|
|
| >PRK06598 aspartate-semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.18 E-value=0.027 Score=53.33 Aligned_cols=90 Identities=18% Similarity=0.099 Sum_probs=51.8
Q ss_pred CCEEEEEcCCChHHHHHHHHHHh-CCCe---EEEEEcCcch-hhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEECCcc
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIV-KRTR---IKALVKDKRN-AMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG 172 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~-~g~~---V~~~~R~~~~-~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~g 172 (305)
|++|.|.||||.+|+.+++.|++ .... ++.++..... ....+... .....+..+.+. +.++|+||++++.
T Consensus 1 m~~VAIVGATG~vG~ell~llL~~~~f~~~~l~~~ss~~sg~~~~~f~g~-~~~v~~~~~~~~----~~~~Divf~a~~~ 75 (369)
T PRK06598 1 MKKVGFVGWRGMVGSVLMQRMVEENDFDLIEPVFFSTSQAGGAAPSFGGK-EGTLQDAFDIDA----LKKLDIIITCQGG 75 (369)
T ss_pred CeEEEEEeCCCHHHHHHHHHHHhCCCCCcCcEEEecchhhCCcccccCCC-cceEEecCChhH----hcCCCEEEECCCH
Confidence 37899999999999999995554 5555 6665443211 11112221 223344444333 4789999998654
Q ss_pred h----HhhhhhhcCCC-EEEEEccc
Q 021928 173 F----ISNAGSLKGVQ-HVILLSQL 192 (305)
Q Consensus 173 ~----~~~~a~~~gv~-~~V~iSS~ 192 (305)
. +...+.+.|++ .+|=.|+.
T Consensus 76 ~~s~~~~~~~~~aG~~~~VID~Ss~ 100 (369)
T PRK06598 76 DYTNEVYPKLRAAGWQGYWIDAAST 100 (369)
T ss_pred HHHHHHHHHHHhCCCCeEEEECChH
Confidence 3 33334456764 34444544
|
|
| >PRK12549 shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.17 E-value=0.0056 Score=56.02 Aligned_cols=68 Identities=16% Similarity=0.174 Sum_probs=48.9
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcchhhhhc---C---CCcEEeecCCCCHHHHHHHhcCccEEEEC
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESF---G---TYVESMAGDASNKKFLKTALRGVRSIICP 169 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~---~---~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~ 169 (305)
..++|+|.|+ |+.|++++..|+..|. +|+++.|+.+++.... . ..+.+.. + +++.+.+.++|.||++
T Consensus 126 ~~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~~~~~~~~--~---~~~~~~~~~aDiVIna 199 (284)
T PRK12549 126 SLERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARFPAARATA--G---SDLAAALAAADGLVHA 199 (284)
T ss_pred cCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhCCCeEEEe--c---cchHhhhCCCCEEEEC
Confidence 4589999998 8899999999999997 7999999987754321 1 1122211 1 2344567889999988
Q ss_pred C
Q 021928 170 S 170 (305)
Q Consensus 170 ~ 170 (305)
+
T Consensus 200 T 200 (284)
T PRK12549 200 T 200 (284)
T ss_pred C
Confidence 3
|
|
| >cd01487 E1_ThiF_like E1_ThiF_like | Back alignment and domain information |
|---|
Probab=96.16 E-value=0.057 Score=45.69 Aligned_cols=88 Identities=11% Similarity=0.116 Sum_probs=56.8
Q ss_pred EEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCc---chh---------------------hhhcCC--CcEEeecCCCC
Q 021928 100 AVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDK---RNA---------------------MESFGT--YVESMAGDASN 152 (305)
Q Consensus 100 ~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~---~~~---------------------~~~~~~--~v~~v~~D~~d 152 (305)
+|+|.|+ |++|+++++.|+..|. ++++++.+. +.. ...+.+ +++.+...+..
T Consensus 1 ~VlViG~-GglGs~ia~~La~~Gvg~i~lvD~D~v~~sNl~Rq~~~~~~vg~~Ka~~~~~~l~~lnp~v~i~~~~~~~~~ 79 (174)
T cd01487 1 KVGIAGA-GGLGSNIAVLLARSGVGNLKLVDFDVVEPSNLNRQQYFLSQIGEPKVEALKENLREINPFVKIEAINIKIDE 79 (174)
T ss_pred CEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCEEcCcchhcccccHhhCCChHHHHHHHHHHHHCCCCEEEEEEeecCh
Confidence 5899997 9999999999999997 688887764 110 011223 34444445543
Q ss_pred HHHHHHHhcCccEEEECCcch-----Hhhhhhhc-CCCEEEEEc
Q 021928 153 KKFLKTALRGVRSIICPSEGF-----ISNAGSLK-GVQHVILLS 190 (305)
Q Consensus 153 ~~~~~~~~~~~d~Vi~~~~g~-----~~~~a~~~-gv~~~V~iS 190 (305)
+.+.+.++++|.||.+.... +.+.+.+. +++ +|+.+
T Consensus 80 -~~~~~~l~~~DlVi~~~d~~~~r~~i~~~~~~~~~ip-~i~~~ 121 (174)
T cd01487 80 -NNLEGLFGDCDIVVEAFDNAETKAMLAESLLGNKNKP-VVCAS 121 (174)
T ss_pred -hhHHHHhcCCCEEEECCCCHHHHHHHHHHHHHHCCCC-EEEEe
Confidence 56778899999999884432 33444444 654 44443
|
Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown. |
| >PRK13940 glutamyl-tRNA reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.16 E-value=0.016 Score=55.93 Aligned_cols=71 Identities=13% Similarity=0.139 Sum_probs=52.5
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEECC
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS 170 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~ 170 (305)
..+++|+|.|+ |.+|+.+++.|.+.|. +|++..|+.+++...... +. .+.....+.+...+..+|+||+++
T Consensus 179 l~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~-~~--~~~~~~~~~l~~~l~~aDiVI~aT 250 (414)
T PRK13940 179 ISSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQKITSA-FR--NASAHYLSELPQLIKKADIIIAAV 250 (414)
T ss_pred ccCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHH-hc--CCeEecHHHHHHHhccCCEEEECc
Confidence 45689999998 9999999999999995 799999998775443221 10 011223356788899999999883
|
|
| >PRK05600 thiamine biosynthesis protein ThiF; Validated | Back alignment and domain information |
|---|
Probab=96.15 E-value=0.056 Score=51.40 Aligned_cols=87 Identities=18% Similarity=0.273 Sum_probs=60.1
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcch-------------------h------hhhcCC--CcEEee
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRN-------------------A------MESFGT--YVESMA 147 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~-------------------~------~~~~~~--~v~~v~ 147 (305)
....+|+|.|+ |++|+++++.|+..|. ++++++.+.-. . ...+.+ +++.+.
T Consensus 39 l~~~~VliiG~-GglG~~v~~~La~~Gvg~i~ivD~D~ve~sNL~RQ~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~~ 117 (370)
T PRK05600 39 LHNARVLVIGA-GGLGCPAMQSLASAGVGTITLIDDDTVDVSNIHRQILFGASDVGRPKVEVAAERLKEIQPDIRVNALR 117 (370)
T ss_pred hcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCCEEccccccccccCChhHCCCHHHHHHHHHHHHHCCCCeeEEee
Confidence 34589999998 8999999999999996 78887765211 0 001123 344555
Q ss_pred cCCCCHHHHHHHhcCccEEEECCcch-----HhhhhhhcCCC
Q 021928 148 GDASNKKFLKTALRGVRSIICPSEGF-----ISNAGSLKGVQ 184 (305)
Q Consensus 148 ~D~~d~~~~~~~~~~~d~Vi~~~~g~-----~~~~a~~~gv~ 184 (305)
..++ .+.+.+.++++|.||.+.... +.++|.+.+++
T Consensus 118 ~~i~-~~~~~~~~~~~DlVid~~Dn~~~r~~in~~~~~~~iP 158 (370)
T PRK05600 118 ERLT-AENAVELLNGVDLVLDGSDSFATKFLVADAAEITGTP 158 (370)
T ss_pred eecC-HHHHHHHHhCCCEEEECCCCHHHHHHHHHHHHHcCCC
Confidence 5554 456778899999999885543 45667777765
|
|
| >PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.15 E-value=0.02 Score=55.20 Aligned_cols=67 Identities=16% Similarity=0.073 Sum_probs=50.6
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEECCc
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE 171 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~ 171 (305)
..+++|+|+|. |.||+.+++.|...|.+|++..+++.+..+....+++++ + +.++++++|+||.+++
T Consensus 210 l~Gk~VlViG~-G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~~A~~~G~~v~-----~---l~eal~~aDVVI~aTG 276 (425)
T PRK05476 210 IAGKVVVVAGY-GDVGKGCAQRLRGLGARVIVTEVDPICALQAAMDGFRVM-----T---MEEAAELGDIFVTATG 276 (425)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCchhhHHHHhcCCEec-----C---HHHHHhCCCEEEECCC
Confidence 35799999997 999999999999999999999998866433222233322 2 3466789999998854
|
|
| >KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=96.14 E-value=0.023 Score=52.28 Aligned_cols=94 Identities=11% Similarity=0.136 Sum_probs=64.3
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcC-CCcEEeecCCCCHHHHHHHhcCccEEEECC----c
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG-TYVESMAGDASNKKFLKTALRGVRSIICPS----E 171 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~-~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~----~ 171 (305)
+++++.|+|+.| +|..=++...+.|++|+++++...+.++.+. -+.+++..-..|++.++++.+-.|.+++.. .
T Consensus 181 pG~~vgI~GlGG-LGh~aVq~AKAMG~rV~vis~~~~kkeea~~~LGAd~fv~~~~d~d~~~~~~~~~dg~~~~v~~~a~ 259 (360)
T KOG0023|consen 181 PGKWVGIVGLGG-LGHMAVQYAKAMGMRVTVISTSSKKKEEAIKSLGADVFVDSTEDPDIMKAIMKTTDGGIDTVSNLAE 259 (360)
T ss_pred CCcEEEEecCcc-cchHHHHHHHHhCcEEEEEeCCchhHHHHHHhcCcceeEEecCCHHHHHHHHHhhcCcceeeeeccc
Confidence 789999999977 9998888888899999999999866555443 245666554557777777666555555442 2
Q ss_pred c---hHhhhhhhcCCCEEEEEcccc
Q 021928 172 G---FISNAGSLKGVQHVILLSQLS 193 (305)
Q Consensus 172 g---~~~~~a~~~gv~~~V~iSS~~ 193 (305)
- ....+++..| ++|+++-..
T Consensus 260 ~~~~~~~~~lk~~G--t~V~vg~p~ 282 (360)
T KOG0023|consen 260 HALEPLLGLLKVNG--TLVLVGLPE 282 (360)
T ss_pred cchHHHHHHhhcCC--EEEEEeCcC
Confidence 1 1333344443 788887543
|
|
| >cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins | Back alignment and domain information |
|---|
Probab=96.13 E-value=0.055 Score=43.94 Aligned_cols=90 Identities=22% Similarity=0.261 Sum_probs=58.1
Q ss_pred EEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcch-------------------h------hhhcCC--CcEEeecCCC
Q 021928 100 AVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRN-------------------A------MESFGT--YVESMAGDAS 151 (305)
Q Consensus 100 ~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~-------------------~------~~~~~~--~v~~v~~D~~ 151 (305)
+|+|.|+ |.+|+++++.|+..|. ++.+++.+.-. . .....+ .++.+..++.
T Consensus 1 ~VliiG~-GglGs~ia~~L~~~Gv~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~~p~v~i~~~~~~~~ 79 (143)
T cd01483 1 RVLLVGL-GGLGSEIALNLARSGVGKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNELNPGVNVTAVPEGIS 79 (143)
T ss_pred CEEEECC-CHHHHHHHHHHHHCCCCEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHHHCCCcEEEEEeeecC
Confidence 5899997 9999999999999997 67777654210 0 001123 3344444544
Q ss_pred CHHHHHHHhcCccEEEECCcc-----hHhhhhhhcCCCEEEEEccc
Q 021928 152 NKKFLKTALRGVRSIICPSEG-----FISNAGSLKGVQHVILLSQL 192 (305)
Q Consensus 152 d~~~~~~~~~~~d~Vi~~~~g-----~~~~~a~~~gv~~~V~iSS~ 192 (305)
+ ......+.++|+||.+... .+.+.+++.+++ +|..++.
T Consensus 80 ~-~~~~~~~~~~diVi~~~d~~~~~~~l~~~~~~~~i~-~i~~~~~ 123 (143)
T cd01483 80 E-DNLDDFLDGVDLVIDAIDNIAVRRALNRACKELGIP-VIDAGGL 123 (143)
T ss_pred h-hhHHHHhcCCCEEEECCCCHHHHHHHHHHHHHcCCC-EEEEcCC
Confidence 4 3346778899999988443 255677887764 4455443
|
This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. |
| >PRK00045 hemA glutamyl-tRNA reductase; Reviewed | Back alignment and domain information |
|---|
Probab=96.08 E-value=0.015 Score=56.20 Aligned_cols=71 Identities=23% Similarity=0.235 Sum_probs=51.6
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEECCc
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE 171 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~ 171 (305)
..+++|+|.|+ |.+|+.+++.|...|. +|++..|++++....... +. ++..+.+++.+++.++|+||.+++
T Consensus 180 ~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~-~g---~~~~~~~~~~~~l~~aDvVI~aT~ 251 (423)
T PRK00045 180 LSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEELAEE-FG---GEAIPLDELPEALAEADIVISSTG 251 (423)
T ss_pred ccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHH-cC---CcEeeHHHHHHHhccCCEEEECCC
Confidence 45689999997 9999999999999997 799999987664322111 00 122233566778889999998843
|
|
| >PRK09288 purT phosphoribosylglycinamide formyltransferase 2; Validated | Back alignment and domain information |
|---|
Probab=96.07 E-value=0.035 Score=52.86 Aligned_cols=70 Identities=11% Similarity=0.116 Sum_probs=54.5
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhc--CccEEEEC
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--GVRSIICP 169 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~--~~d~Vi~~ 169 (305)
..|+|+|+|+ |..|+.+++.+.+.|++|+.++.++......+.+ .++..|..|.+.+.++++ ++|.|+..
T Consensus 11 ~~~~ilIiG~-g~~~~~~~~a~~~~G~~v~~~~~~~~~~~~~~ad--~~~~~~~~d~~~l~~~~~~~~id~vi~~ 82 (395)
T PRK09288 11 SATRVMLLGS-GELGKEVAIEAQRLGVEVIAVDRYANAPAMQVAH--RSHVIDMLDGDALRAVIEREKPDYIVPE 82 (395)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCCchHHhhh--heEECCCCCHHHHHHHHHHhCCCEEEEe
Confidence 4579999996 7899999999999999999998877542222222 356778889888888887 78988855
|
|
| >PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.07 E-value=0.011 Score=54.63 Aligned_cols=73 Identities=14% Similarity=0.118 Sum_probs=48.3
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCC--CcEEe-----ecCCCCHHHHHHHhcCccEEEECC
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGT--YVESM-----AGDASNKKFLKTALRGVRSIICPS 170 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~--~v~~v-----~~D~~d~~~~~~~~~~~d~Vi~~~ 170 (305)
||+|.|.|+ |.+|..++..|++.|++|.++.|+++...+.... ..... ...+.-..+..++++++|+||.+.
T Consensus 1 mmkI~iiG~-G~mG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~v 79 (325)
T PRK00094 1 MMKIAVLGA-GSWGTALAIVLARNGHDVTLWARDPEQAAEINADRENPRYLPGIKLPDNLRATTDLAEALADADLILVAV 79 (325)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCcccccCCCCcCCCCeEEeCCHHHHHhCCCEEEEeC
Confidence 478999997 9999999999999999999999987653322111 00000 001111123445678999999874
Q ss_pred c
Q 021928 171 E 171 (305)
Q Consensus 171 ~ 171 (305)
+
T Consensus 80 ~ 80 (325)
T PRK00094 80 P 80 (325)
T ss_pred C
Confidence 4
|
|
| >PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B | Back alignment and domain information |
|---|
Probab=96.04 E-value=0.02 Score=44.00 Aligned_cols=83 Identities=11% Similarity=0.207 Sum_probs=55.2
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEECCcch--
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEGF-- 173 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~g~-- 173 (305)
..+++|||+|+ |.+|..-++.|++.|.+|++++...+.. ...+++..-++ ...+++++.||.+.+..
T Consensus 5 l~~~~vlVvGg-G~va~~k~~~Ll~~gA~v~vis~~~~~~----~~~i~~~~~~~------~~~l~~~~lV~~at~d~~~ 73 (103)
T PF13241_consen 5 LKGKRVLVVGG-GPVAARKARLLLEAGAKVTVISPEIEFS----EGLIQLIRREF------EEDLDGADLVFAATDDPEL 73 (103)
T ss_dssp -TT-EEEEEEE-SHHHHHHHHHHCCCTBEEEEEESSEHHH----HTSCEEEESS-------GGGCTTESEEEE-SS-HHH
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCchhhh----hhHHHHHhhhH------HHHHhhheEEEecCCCHHH
Confidence 45699999998 9999999999999999999999885111 14456655444 23488899999775432
Q ss_pred ---HhhhhhhcCCCEEEEEcc
Q 021928 174 ---ISNAGSLKGVQHVILLSQ 191 (305)
Q Consensus 174 ---~~~~a~~~gv~~~V~iSS 191 (305)
+...+++.++ +|.++.
T Consensus 74 n~~i~~~a~~~~i--~vn~~D 92 (103)
T PF13241_consen 74 NEAIYADARARGI--LVNVVD 92 (103)
T ss_dssp HHHHHHHHHHTTS--EEEETT
T ss_pred HHHHHHHHhhCCE--EEEECC
Confidence 4444555543 555543
|
|
| >cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2 | Back alignment and domain information |
|---|
Probab=96.02 E-value=0.056 Score=50.13 Aligned_cols=91 Identities=15% Similarity=0.189 Sum_probs=58.8
Q ss_pred EEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcch-------------------h---h---hhcCC--CcEEeecCCC
Q 021928 100 AVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRN-------------------A---M---ESFGT--YVESMAGDAS 151 (305)
Q Consensus 100 ~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~-------------------~---~---~~~~~--~v~~v~~D~~ 151 (305)
+|+|.|+ |++|.++++.|+..|. ++.+++.+.-. + . ..+.+ .++.+..++.
T Consensus 1 kVlIVGa-GGlG~EiaKnLal~Gvg~ItIvD~D~Ve~sNLnRQflf~~~dVGk~Kaevaa~~l~~lNp~v~V~~~~~~i~ 79 (312)
T cd01489 1 KVLVVGA-GGIGCELLKNLVLTGFGEIHIIDLDTIDLSNLNRQFLFRKKHVGKSKAQVAKEAVLSFNPNVKIVAYHANIK 79 (312)
T ss_pred CEEEECC-CHHHHHHHHHHHHhcCCeEEEEcCCCcchhhcCcCccCChhHcCcHHHHHHHHHHHHHCCCCeEEEEeccCC
Confidence 5899997 9999999999999996 67766544211 0 0 01122 4556667777
Q ss_pred CHHHHHHHhcCccEEEECCcc-----hHhhhhhhcCCCEEEEEccc
Q 021928 152 NKKFLKTALRGVRSIICPSEG-----FISNAGSLKGVQHVILLSQL 192 (305)
Q Consensus 152 d~~~~~~~~~~~d~Vi~~~~g-----~~~~~a~~~gv~~~V~iSS~ 192 (305)
+.....+.++++|+||.+... .+.+.+...+++ +|...+.
T Consensus 80 ~~~~~~~f~~~~DvVv~a~Dn~~ar~~in~~c~~~~ip-~I~~gt~ 124 (312)
T cd01489 80 DPDFNVEFFKQFDLVFNALDNLAARRHVNKMCLAADVP-LIESGTT 124 (312)
T ss_pred CccchHHHHhcCCEEEECCCCHHHHHHHHHHHHHCCCC-EEEEecC
Confidence 643345778999999988442 245566666654 4444433
|
UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2. |
| >cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E | Back alignment and domain information |
|---|
Probab=96.02 E-value=0.18 Score=44.70 Aligned_cols=90 Identities=9% Similarity=0.024 Sum_probs=56.8
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcch---h----------------------hhhcCCCc--EEeec
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRN---A----------------------MESFGTYV--ESMAG 148 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~---~----------------------~~~~~~~v--~~v~~ 148 (305)
...+|+|.|. |++|+++++.|+..|. ++++++.+.-. . .....+.+ +.+..
T Consensus 10 ~~~~VlVvG~-GGvGs~va~~Lar~GVg~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~inP~~~V~~~~~ 88 (231)
T cd00755 10 RNAHVAVVGL-GGVGSWAAEALARSGVGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDINPECEVDAVEE 88 (231)
T ss_pred hCCCEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHHCCCcEEEEeee
Confidence 3589999997 8999999999999996 77777654211 0 00112333 33444
Q ss_pred CCCCHHHHHHHh-cCccEEEECCcc-----hHhhhhhhcCCCEEEEE
Q 021928 149 DASNKKFLKTAL-RGVRSIICPSEG-----FISNAGSLKGVQHVILL 189 (305)
Q Consensus 149 D~~d~~~~~~~~-~~~d~Vi~~~~g-----~~~~~a~~~gv~~~V~i 189 (305)
.+. .+.+...+ .++|+||.+... .+.+.|.+.+++ +|..
T Consensus 89 ~i~-~~~~~~l~~~~~D~VvdaiD~~~~k~~L~~~c~~~~ip-~I~s 133 (231)
T cd00755 89 FLT-PDNSEDLLGGDPDFVVDAIDSIRAKVALIAYCRKRKIP-VISS 133 (231)
T ss_pred ecC-HhHHHHHhcCCCCEEEEcCCCHHHHHHHHHHHHHhCCC-EEEE
Confidence 443 35555555 469999988443 255667777764 4333
|
coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown. |
| >TIGR01035 hemA glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=96.01 E-value=0.015 Score=56.19 Aligned_cols=69 Identities=16% Similarity=0.146 Sum_probs=51.4
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCC-CeEEEEEcCcchhhhhcCC-CcEEeecCCCCHHHHHHHhcCccEEEECC
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAMESFGT-YVESMAGDASNKKFLKTALRGVRSIICPS 170 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~R~~~~~~~~~~~-~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~ 170 (305)
...++|+|.|+ |.+|+.+++.|...| .+|+++.|+.++..+.... +...+ +.+++.+++.++|+||.++
T Consensus 178 l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~g~~~i-----~~~~l~~~l~~aDvVi~aT 248 (417)
T TIGR01035 178 LKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAKELGGEAV-----KFEDLEEYLAEADIVISST 248 (417)
T ss_pred ccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCeEe-----eHHHHHHHHhhCCEEEECC
Confidence 45689999997 999999999999999 7899999998764322110 11222 2356778888999999883
|
This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA. |
| >cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases | Back alignment and domain information |
|---|
Probab=96.00 E-value=0.018 Score=53.75 Aligned_cols=66 Identities=12% Similarity=0.029 Sum_probs=44.9
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCC-------eEEEEEcCcch--hh----hhcC------CCcEEeecCCCCHHHHHH
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRT-------RIKALVKDKRN--AM----ESFG------TYVESMAGDASNKKFLKT 158 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~-------~V~~~~R~~~~--~~----~~~~------~~v~~v~~D~~d~~~~~~ 158 (305)
+++|.|+||+|.||+.++..|+..|. ++++++.++.. +. +... .++++. ....+
T Consensus 2 p~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~-------~~~~~ 74 (322)
T cd01338 2 PVRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIVIT-------DDPNV 74 (322)
T ss_pred CeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceEEe-------cCcHH
Confidence 57999999999999999999998874 68888875322 11 1111 112211 12256
Q ss_pred HhcCccEEEECC
Q 021928 159 ALRGVRSIICPS 170 (305)
Q Consensus 159 ~~~~~d~Vi~~~ 170 (305)
.++++|+||.++
T Consensus 75 ~~~daDivvita 86 (322)
T cd01338 75 AFKDADWALLVG 86 (322)
T ss_pred HhCCCCEEEEeC
Confidence 789999999873
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PRK07411 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=96.00 E-value=0.057 Score=51.73 Aligned_cols=87 Identities=17% Similarity=0.151 Sum_probs=58.3
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcch----------------------hh---hhcCC--CcEEee
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRN----------------------AM---ESFGT--YVESMA 147 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~----------------------~~---~~~~~--~v~~v~ 147 (305)
....+|+|.|+ |++|.++++.|+..|. ++++++.+.-. +. ....+ +++.+.
T Consensus 36 L~~~~VlivG~-GGlG~~va~~La~~Gvg~l~lvD~D~ve~sNL~RQ~l~~~~dvG~~Ka~~a~~~l~~~np~v~v~~~~ 114 (390)
T PRK07411 36 LKAASVLCIGT-GGLGSPLLLYLAAAGIGRIGIVDFDVVDSSNLQRQVIHGTSWVGKPKIESAKNRILEINPYCQVDLYE 114 (390)
T ss_pred HhcCcEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCEecccccCcCcccChHHCCCcHHHHHHHHHHHHCCCCeEEEEe
Confidence 34589999998 8899999999999996 66666544211 00 01123 445555
Q ss_pred cCCCCHHHHHHHhcCccEEEECCcch-----HhhhhhhcCCC
Q 021928 148 GDASNKKFLKTALRGVRSIICPSEGF-----ISNAGSLKGVQ 184 (305)
Q Consensus 148 ~D~~d~~~~~~~~~~~d~Vi~~~~g~-----~~~~a~~~gv~ 184 (305)
..++. +...+.+.++|+||.+.+.. +.++|.+.+++
T Consensus 115 ~~~~~-~~~~~~~~~~D~Vvd~~d~~~~r~~ln~~~~~~~~p 155 (390)
T PRK07411 115 TRLSS-ENALDILAPYDVVVDGTDNFPTRYLVNDACVLLNKP 155 (390)
T ss_pred cccCH-HhHHHHHhCCCEEEECCCCHHHHHHHHHHHHHcCCC
Confidence 55554 55677899999999885543 45667776654
|
|
| >cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=95.98 E-value=0.017 Score=53.50 Aligned_cols=69 Identities=17% Similarity=0.136 Sum_probs=50.4
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCC-CeEEEEEcCcchhhhhcCC-CcEEeecCCCCHHHHHHHhcCccEEEECCc
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAMESFGT-YVESMAGDASNKKFLKTALRGVRSIICPSE 171 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~R~~~~~~~~~~~-~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~ 171 (305)
..++|+|.|+ |.+|+.+++.|...| .+|.++.|++++..+.... +..+ .+.+.+.+++..+|+||.+++
T Consensus 177 ~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~g~~~-----~~~~~~~~~l~~aDvVi~at~ 247 (311)
T cd05213 177 KGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAEELAKELGGNA-----VPLDELLELLNEADVVISATG 247 (311)
T ss_pred cCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcCCeE-----EeHHHHHHHHhcCCEEEECCC
Confidence 5699999998 999999999999876 6888999988764322111 1222 233456777889999998843
|
Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, |
| >PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.97 E-value=0.018 Score=53.19 Aligned_cols=35 Identities=6% Similarity=0.102 Sum_probs=31.8
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcc
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR 133 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~ 133 (305)
.|+|.|.|+ |.+|..+++.|.+.|++|++..|++.
T Consensus 4 ~m~I~iiG~-G~~G~~lA~~l~~~G~~V~~~~r~~~ 38 (308)
T PRK14619 4 PKTIAILGA-GAWGSTLAGLASANGHRVRVWSRRSG 38 (308)
T ss_pred CCEEEEECc-cHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 478999986 99999999999999999999999763
|
|
| >PRK11559 garR tartronate semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.97 E-value=0.017 Score=52.97 Aligned_cols=66 Identities=12% Similarity=0.019 Sum_probs=47.9
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEECCc
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE 171 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~ 171 (305)
.++|.|.|. |.+|+.+++.|++.|++|.+..|++++.......++.+ .+++.++++++|+||.+.+
T Consensus 2 ~~~IgviG~-G~mG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~~g~~~-------~~~~~e~~~~~d~vi~~vp 67 (296)
T PRK11559 2 TMKVGFIGL-GIMGKPMSKNLLKAGYSLVVYDRNPEAVAEVIAAGAET-------ASTAKAVAEQCDVIITMLP 67 (296)
T ss_pred CceEEEEcc-CHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCee-------cCCHHHHHhcCCEEEEeCC
Confidence 478999995 99999999999999999999999886644332222211 1234456778899997743
|
|
| >TIGR00507 aroE shikimate 5-dehydrogenase | Back alignment and domain information |
|---|
Probab=95.97 E-value=0.022 Score=51.64 Aligned_cols=69 Identities=20% Similarity=0.175 Sum_probs=46.7
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhc---CCCcEEeecCCCCHHHHHHHhcCccEEEECCc
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF---GTYVESMAGDASNKKFLKTALRGVRSIICPSE 171 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~---~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~ 171 (305)
..++++|+|+ |++|+.++..|++.|++|.++.|++++..+.. ...-.....++.+ ..+.++|+||++++
T Consensus 116 ~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~~~~~~~~~~~-----~~~~~~DivInatp 187 (270)
T TIGR00507 116 PNQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAEELAERFQRYGEIQAFSMDE-----LPLHRVDLIINATS 187 (270)
T ss_pred cCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhcCceEEechhh-----hcccCccEEEECCC
Confidence 3589999998 89999999999999999999999876643321 1100011111111 23457899998843
|
This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain. |
| >cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity | Back alignment and domain information |
|---|
Probab=95.95 E-value=0.011 Score=54.81 Aligned_cols=34 Identities=18% Similarity=0.250 Sum_probs=30.9
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCC--eEEEEEcCc
Q 021928 99 DAVLVTDGDSDIGQMVILSLIVKRT--RIKALVKDK 132 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~R~~ 132 (305)
|+|.|+||+|.+|+.++..|+..|+ +|++++|++
T Consensus 1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~ 36 (309)
T cd05294 1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPK 36 (309)
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcc
Confidence 6899999999999999999999986 599999954
|
The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox |
| >cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy) | Back alignment and domain information |
|---|
Probab=95.94 E-value=0.031 Score=53.78 Aligned_cols=67 Identities=18% Similarity=0.139 Sum_probs=50.4
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEECCc
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE 171 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~ 171 (305)
..+++|+|.|+ |.||+.+++.+...|.+|+++.+++.+.......++..+ + +.++++++|+||.+++
T Consensus 200 l~GktVvViG~-G~IG~~va~~ak~~Ga~ViV~d~d~~R~~~A~~~G~~~~-----~---~~e~v~~aDVVI~atG 266 (413)
T cd00401 200 IAGKVAVVAGY-GDVGKGCAQSLRGQGARVIVTEVDPICALQAAMEGYEVM-----T---MEEAVKEGDIFVTTTG 266 (413)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECChhhHHHHHhcCCEEc-----c---HHHHHcCCCEEEECCC
Confidence 45799999998 999999999999999999999888766443333334332 1 2356678999998854
|
The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+. |
| >PRK06522 2-dehydropantoate 2-reductase; Reviewed | Back alignment and domain information |
|---|
Probab=95.93 E-value=0.018 Score=52.62 Aligned_cols=36 Identities=8% Similarity=0.124 Sum_probs=32.3
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchh
Q 021928 99 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA 135 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~ 135 (305)
|+|+|.|+ |.+|..++..|.+.|++|.++.|+++..
T Consensus 1 m~I~IiG~-G~~G~~~a~~L~~~g~~V~~~~r~~~~~ 36 (304)
T PRK06522 1 MKIAILGA-GAIGGLFGAALAQAGHDVTLVARRGAHL 36 (304)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECChHHH
Confidence 57999997 9999999999999999999999976553
|
|
| >COG0136 Asd Aspartate-semialdehyde dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.89 E-value=0.024 Score=52.59 Aligned_cols=92 Identities=16% Similarity=0.268 Sum_probs=52.2
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCe---EEEE--EcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEECCcc
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTR---IKAL--VKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG 172 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~---V~~~--~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~g 172 (305)
+++|.|.||||.+|+.+++.|.++... +.++ .|+..+..-.+......+.-++.|.. .++++|.+|+++++
T Consensus 1 ~~~VavvGATG~VG~~~~~~L~e~~f~~~~~~~~AS~rSaG~~~~~f~~~~~~v~~~~~~~~----~~~~~Divf~~ag~ 76 (334)
T COG0136 1 KLNVAVLGATGAVGQVLLELLEERHFPFEELVLLASARSAGKKYIEFGGKSIGVPEDAADEF----VFSDVDIVFFAAGG 76 (334)
T ss_pred CcEEEEEeccchHHHHHHHHHHhcCCCcceEEEEecccccCCccccccCccccCcccccccc----ccccCCEEEEeCch
Confidence 478999999999999999999997643 2222 33333321222221112222223322 24499999999765
Q ss_pred hH----hhhhhhcCCCEEEEEccccccc
Q 021928 173 FI----SNAGSLKGVQHVILLSQLSVYR 196 (305)
Q Consensus 173 ~~----~~~a~~~gv~~~V~iSS~~~~~ 196 (305)
.. ...+.++| .+.++..++++
T Consensus 77 ~~s~~~~p~~~~~G---~~VIdnsSa~R 101 (334)
T COG0136 77 SVSKEVEPKAAEAG---CVVIDNSSAFR 101 (334)
T ss_pred HHHHHHHHHHHHcC---CEEEeCCcccc
Confidence 43 33345566 33444444443
|
|
| >TIGR01851 argC_other N-acetyl-gamma-glutamyl-phosphate reductase, uncommon form | Back alignment and domain information |
|---|
Probab=95.89 E-value=0.032 Score=51.50 Aligned_cols=76 Identities=14% Similarity=0.085 Sum_probs=49.0
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEECCcch----
Q 021928 99 DAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEGF---- 173 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~g~---- 173 (305)
.+|.|.||+|++|.++++.|....+ ++..+.-+.. .+..+ ..++++++|+||++.+..
T Consensus 2 ~~v~IvGasGy~G~el~rlL~~HP~~el~~l~s~~~--------------~~~~~---~~~~~~~~D~vFlalp~~~s~~ 64 (310)
T TIGR01851 2 PKVFIDGEAGTTGLQIRERLSGRDDIELLSIAPDRR--------------KDAAE---RAKLLNAADVAILCLPDDAARE 64 (310)
T ss_pred CeEEEECCCChhHHHHHHHHhCCCCeEEEEEecccc--------------cCcCC---HhHhhcCCCEEEECCCHHHHHH
Confidence 4799999999999999999998763 6665543321 11112 335667899999885432
Q ss_pred HhhhhhhcCCCEEEEEccc
Q 021928 174 ISNAGSLKGVQHVILLSQL 192 (305)
Q Consensus 174 ~~~~a~~~gv~~~V~iSS~ 192 (305)
+...+.+.|+ ++|=.|+.
T Consensus 65 ~~~~~~~~g~-~VIDlSad 82 (310)
T TIGR01851 65 AVSLVDNPNT-CIIDASTA 82 (310)
T ss_pred HHHHHHhCCC-EEEECChH
Confidence 2233334454 56666654
|
This model represents the less common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and gap architecture in a multiple sequence alignment. |
| >cd08293 PTGR2 Prostaglandin reductase | Back alignment and domain information |
|---|
Probab=95.86 E-value=0.091 Score=48.70 Aligned_cols=91 Identities=15% Similarity=0.153 Sum_probs=57.1
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcchhhhh---cCCCcEEeecCCC--C-HHHHHHHh-cCccEEEECC
Q 021928 99 DAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMES---FGTYVESMAGDAS--N-KKFLKTAL-RGVRSIICPS 170 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~---~~~~v~~v~~D~~--d-~~~~~~~~-~~~d~Vi~~~ 170 (305)
.+|||+||+|.+|...++.+...|. +|+++++++++.... ++ ++.+ .|.. + .+.+.+.. +++|+|+.+.
T Consensus 156 ~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lG--a~~v-i~~~~~~~~~~i~~~~~~gvd~vid~~ 232 (345)
T cd08293 156 QTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELG--FDAA-INYKTDNVAERLRELCPEGVDVYFDNV 232 (345)
T ss_pred CEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcC--CcEE-EECCCCCHHHHHHHHCCCCceEEEECC
Confidence 8999999999999999988888998 799999887664322 33 2222 2222 2 23333332 4689999875
Q ss_pred cch-Hhhhhhh-cCCCEEEEEccc
Q 021928 171 EGF-ISNAGSL-KGVQHVILLSQL 192 (305)
Q Consensus 171 ~g~-~~~~a~~-~gv~~~V~iSS~ 192 (305)
++. ...+.+. ..-.++|.++..
T Consensus 233 g~~~~~~~~~~l~~~G~iv~~G~~ 256 (345)
T cd08293 233 GGEISDTVISQMNENSHIILCGQI 256 (345)
T ss_pred CcHHHHHHHHHhccCCEEEEEeee
Confidence 443 2222221 233478877643
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid |
| >TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating) | Back alignment and domain information |
|---|
Probab=95.85 E-value=0.028 Score=51.77 Aligned_cols=67 Identities=10% Similarity=0.034 Sum_probs=49.7
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEECC
Q 021928 99 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS 170 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~ 170 (305)
|+|.|.|. |.+|..+++.|++.|++|.+..|++++........... ..+.+.+.+.+..+|+|+.+.
T Consensus 1 M~Ig~IGl-G~mG~~la~~L~~~g~~V~~~dr~~~~~~~l~~~g~~~----~~s~~~~~~~~~~~dvIi~~v 67 (298)
T TIGR00872 1 MQLGLIGL-GRMGANIVRRLAKRGHDCVGYDHDQDAVKAMKEDRTTG----VANLRELSQRLSAPRVVWVMV 67 (298)
T ss_pred CEEEEEcc-hHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCcc----cCCHHHHHhhcCCCCEEEEEc
Confidence 47999996 99999999999999999999999987754433222211 234556666677889998773
|
This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle. |
| >PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate | Back alignment and domain information |
|---|
Probab=95.84 E-value=0.0064 Score=50.52 Aligned_cols=71 Identities=14% Similarity=0.085 Sum_probs=46.8
Q ss_pred EEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhc--------CCCcEEeecCCCCHHHHHHHhcCccEEEECCc
Q 021928 100 AVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF--------GTYVESMAGDASNKKFLKTALRGVRSIICPSE 171 (305)
Q Consensus 100 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~--------~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~ 171 (305)
+|.|.|| |..|.+++..|..+|++|.+..|+++...... -++++.-. .+.=.++++++++++|.|+.+.+
T Consensus 1 KI~ViGa-G~~G~AlA~~la~~g~~V~l~~~~~~~~~~i~~~~~n~~~~~~~~l~~-~i~~t~dl~~a~~~ad~IiiavP 78 (157)
T PF01210_consen 1 KIAVIGA-GNWGTALAALLADNGHEVTLWGRDEEQIEEINETRQNPKYLPGIKLPE-NIKATTDLEEALEDADIIIIAVP 78 (157)
T ss_dssp EEEEESS-SHHHHHHHHHHHHCTEEEEEETSCHHHHHHHHHHTSETTTSTTSBEET-TEEEESSHHHHHTT-SEEEE-S-
T ss_pred CEEEECc-CHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHhCCCCCCCCCcccCc-ccccccCHHHHhCcccEEEeccc
Confidence 6899998 99999999999999999999999976532111 01111110 11111346788999999998855
Q ss_pred c
Q 021928 172 G 172 (305)
Q Consensus 172 g 172 (305)
.
T Consensus 79 s 79 (157)
T PF01210_consen 79 S 79 (157)
T ss_dssp G
T ss_pred H
Confidence 3
|
This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A .... |
| >PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=95.82 E-value=0.016 Score=52.92 Aligned_cols=72 Identities=13% Similarity=0.069 Sum_probs=49.0
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhc-------CCCcEE----------eecCCCCHHHHHHHhc
Q 021928 99 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF-------GTYVES----------MAGDASNKKFLKTALR 161 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-------~~~v~~----------v~~D~~d~~~~~~~~~ 161 (305)
++|.|.|+ |.+|..++..|++.|++|++++++++...... ...++. +...+.-.+++.++++
T Consensus 2 ~~V~VIG~-G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~ 80 (288)
T PRK09260 2 EKLVVVGA-GVMGRGIAYVFAVSGFQTTLVDIKQEQLESAQQEIASIFEQGVARGKLTEAARQAALARLSYSLDLKAAVA 80 (288)
T ss_pred cEEEEECc-cHHHHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEEeCcHHHhhc
Confidence 68999998 99999999999999999999999987643211 000000 0000111134567889
Q ss_pred CccEEEECCc
Q 021928 162 GVRSIICPSE 171 (305)
Q Consensus 162 ~~d~Vi~~~~ 171 (305)
++|.||.+.+
T Consensus 81 ~aD~Vi~avp 90 (288)
T PRK09260 81 DADLVIEAVP 90 (288)
T ss_pred CCCEEEEecc
Confidence 9999997743
|
|
| >PRK00066 ldh L-lactate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=95.82 E-value=0.035 Score=51.56 Aligned_cols=68 Identities=10% Similarity=0.201 Sum_probs=47.6
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCC--eEEEEEcCcchhhhh---------cCCCcEEeecCCCCHHHHHHHhcCc
Q 021928 95 PEARDAVLVTDGDSDIGQMVILSLIVKRT--RIKALVKDKRNAMES---------FGTYVESMAGDASNKKFLKTALRGV 163 (305)
Q Consensus 95 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~R~~~~~~~~---------~~~~v~~v~~D~~d~~~~~~~~~~~ 163 (305)
+..+++|.|+|| |.+|+.++..|+..|. ++++++++.+.+... +...+.+.. .+ .+.++++
T Consensus 3 ~~~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~~---~~----~~~~~~a 74 (315)
T PRK00066 3 KKQHNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIYA---GD----YSDCKDA 74 (315)
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEEe---CC----HHHhCCC
Confidence 345689999998 9999999999999986 799999877652211 111222221 22 2458999
Q ss_pred cEEEECC
Q 021928 164 RSIICPS 170 (305)
Q Consensus 164 d~Vi~~~ 170 (305)
|+||.++
T Consensus 75 divIita 81 (315)
T PRK00066 75 DLVVITA 81 (315)
T ss_pred CEEEEec
Confidence 9999873
|
|
| >PRK11880 pyrroline-5-carboxylate reductase; Reviewed | Back alignment and domain information |
|---|
Probab=95.82 E-value=0.022 Score=51.29 Aligned_cols=66 Identities=9% Similarity=0.044 Sum_probs=46.4
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCC---CeEEEEEcCcchhhhhcCC-CcEEeecCCCCHHHHHHHhcCccEEEECC
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKR---TRIKALVKDKRNAMESFGT-YVESMAGDASNKKFLKTALRGVRSIICPS 170 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~R~~~~~~~~~~~-~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~ 170 (305)
++|+|.|.|+ |.+|..+++.|.+.| ++|.+.+|++++....... ++.+ . .+..+++..+|.||.+.
T Consensus 1 ~mm~I~iIG~-G~mG~~la~~l~~~g~~~~~v~v~~r~~~~~~~~~~~~g~~~-----~--~~~~~~~~~advVil~v 70 (267)
T PRK11880 1 MMKKIGFIGG-GNMASAIIGGLLASGVPAKDIIVSDPSPEKRAALAEEYGVRA-----A--TDNQEAAQEADVVVLAV 70 (267)
T ss_pred CCCEEEEEec-hHHHHHHHHHHHhCCCCcceEEEEcCCHHHHHHHHHhcCCee-----c--CChHHHHhcCCEEEEEc
Confidence 3688999997 999999999999998 7899999987664332221 2221 1 12234467889988773
|
|
| >PLN02948 phosphoribosylaminoimidazole carboxylase | Back alignment and domain information |
|---|
Probab=95.81 E-value=0.061 Score=54.14 Aligned_cols=72 Identities=13% Similarity=0.166 Sum_probs=56.5
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEEC
Q 021928 95 PEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 169 (305)
Q Consensus 95 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~ 169 (305)
+.++|+|+|.|+ |.+|+.+++.+.+.|++|++++.++......+.+ +.+.+|+.|.+.+.++.+.+|+|...
T Consensus 19 ~~~~k~IgIIGg-Gqlg~mla~aA~~lG~~Vi~ld~~~~apa~~~AD--~~~v~~~~D~~~l~~~a~~~dvIt~e 90 (577)
T PLN02948 19 GVSETVVGVLGG-GQLGRMLCQAASQMGIKVKVLDPLEDCPASSVAA--RHVVGSFDDRAAVREFAKRCDVLTVE 90 (577)
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhCc--eeeeCCCCCHHHHHHHHHHCCEEEEe
Confidence 456799999998 7999999999999999999998876532222222 45568899999998888889988543
|
|
| >cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1 | Back alignment and domain information |
|---|
Probab=95.80 E-value=0.084 Score=45.64 Aligned_cols=94 Identities=12% Similarity=0.124 Sum_probs=60.2
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcch-------------------h------hhhcCC--CcEEeec
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRN-------------------A------MESFGT--YVESMAG 148 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~-------------------~------~~~~~~--~v~~v~~ 148 (305)
...+|+|.|+ |++|.++++.|+..|. ++.+++.+.-. . .....+ .++++..
T Consensus 20 ~~s~VlIiG~-gglG~evak~La~~GVg~i~lvD~d~ve~snL~rqfl~~~~diG~~Ka~a~~~~L~~lNp~v~i~~~~~ 98 (197)
T cd01492 20 RSARILLIGL-KGLGAEIAKNLVLSGIGSLTILDDRTVTEEDLGAQFLIPAEDLGQNRAEASLERLRALNPRVKVSVDTD 98 (197)
T ss_pred HhCcEEEEcC-CHHHHHHHHHHHHcCCCEEEEEECCcccHhhCCCCccccHHHcCchHHHHHHHHHHHHCCCCEEEEEec
Confidence 4589999997 5699999999999996 57776544211 0 011223 3444444
Q ss_pred CCCCHHHHHHHhcCccEEEECCcch-----HhhhhhhcCCCEEEEEccccc
Q 021928 149 DASNKKFLKTALRGVRSIICPSEGF-----ISNAGSLKGVQHVILLSQLSV 194 (305)
Q Consensus 149 D~~d~~~~~~~~~~~d~Vi~~~~g~-----~~~~a~~~gv~~~V~iSS~~~ 194 (305)
.+.+ ...+.++++|+||.+.... +.+.|++.+++ +|+.++.+.
T Consensus 99 ~~~~--~~~~~~~~~dvVi~~~~~~~~~~~ln~~c~~~~ip-~i~~~~~G~ 146 (197)
T cd01492 99 DISE--KPEEFFSQFDVVVATELSRAELVKINELCRKLGVK-FYATGVHGL 146 (197)
T ss_pred Cccc--cHHHHHhCCCEEEECCCCHHHHHHHHHHHHHcCCC-EEEEEecCC
Confidence 4542 2456688999999874332 55677888875 556655443
|
Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain. |
| >PRK06249 2-dehydropantoate 2-reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.80 E-value=0.02 Score=52.95 Aligned_cols=38 Identities=11% Similarity=0.084 Sum_probs=33.6
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcch
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN 134 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~ 134 (305)
...|+|+|.|+ |.||..++..|.+.|++|.++.|++..
T Consensus 3 ~~~m~I~IiG~-GaiG~~lA~~L~~~g~~V~~~~r~~~~ 40 (313)
T PRK06249 3 SETPRIGIIGT-GAIGGFYGAMLARAGFDVHFLLRSDYE 40 (313)
T ss_pred CcCcEEEEECC-CHHHHHHHHHHHHCCCeEEEEEeCCHH
Confidence 34589999987 999999999999999999999998743
|
|
| >PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=95.80 E-value=0.042 Score=51.20 Aligned_cols=73 Identities=5% Similarity=-0.042 Sum_probs=49.4
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh-------c----CCCc--EEeecCCCCHHHHHHHhcCcc
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------F----GTYV--ESMAGDASNKKFLKTALRGVR 164 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~-------~----~~~v--~~v~~D~~d~~~~~~~~~~~d 164 (305)
.++|.|.|+ |-+|+.++..++..|++|++.+++++..... + ..+. ......+.-..++.+++.++|
T Consensus 7 i~~VaVIGa-G~MG~giA~~~a~aG~~V~l~D~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~l~~av~~aD 85 (321)
T PRK07066 7 IKTFAAIGS-GVIGSGWVARALAHGLDVVAWDPAPGAEAALRANVANAWPALERQGLAPGASPARLRFVATIEACVADAD 85 (321)
T ss_pred CCEEEEECc-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCChhhHHhhceecCCHHHHhcCCC
Confidence 378999997 9999999999999999999999987642210 0 0000 000111122234668889999
Q ss_pred EEEECCc
Q 021928 165 SIICPSE 171 (305)
Q Consensus 165 ~Vi~~~~ 171 (305)
.|+-+.+
T Consensus 86 lViEavp 92 (321)
T PRK07066 86 FIQESAP 92 (321)
T ss_pred EEEECCc
Confidence 9997743
|
|
| >PLN02494 adenosylhomocysteinase | Back alignment and domain information |
|---|
Probab=95.80 E-value=0.033 Score=54.19 Aligned_cols=67 Identities=10% Similarity=0.118 Sum_probs=50.3
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEECCc
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE 171 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~ 171 (305)
..+++|+|+|. |.||+.+++.+...|.+|+++.+++.+.......++.++ .+.++++..|+||.+.+
T Consensus 252 LaGKtVvViGy-G~IGr~vA~~aka~Ga~VIV~e~dp~r~~eA~~~G~~vv--------~leEal~~ADVVI~tTG 318 (477)
T PLN02494 252 IAGKVAVICGY-GDVGKGCAAAMKAAGARVIVTEIDPICALQALMEGYQVL--------TLEDVVSEADIFVTTTG 318 (477)
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhHHHHhcCCeec--------cHHHHHhhCCEEEECCC
Confidence 34699999997 899999999999999999999998865433322233332 13456788999998744
|
|
| >PTZ00075 Adenosylhomocysteinase; Provisional | Back alignment and domain information |
|---|
Probab=95.77 E-value=0.036 Score=54.07 Aligned_cols=67 Identities=15% Similarity=0.087 Sum_probs=50.2
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEECCc
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE 171 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~ 171 (305)
..+++|+|.|. |.||+.+++.|...|.+|++..+++.+.......+++++ .+.++++.+|+|+.+.+
T Consensus 252 LaGKtVgVIG~-G~IGr~vA~rL~a~Ga~ViV~e~dp~~a~~A~~~G~~~~--------~leell~~ADIVI~atG 318 (476)
T PTZ00075 252 IAGKTVVVCGY-GDVGKGCAQALRGFGARVVVTEIDPICALQAAMEGYQVV--------TLEDVVETADIFVTATG 318 (476)
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHhcCceec--------cHHHHHhcCCEEEECCC
Confidence 45699999997 899999999999999999999888765432222233322 24567889999998743
|
|
| >PRK06728 aspartate-semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.76 E-value=0.082 Score=49.71 Aligned_cols=89 Identities=19% Similarity=0.194 Sum_probs=51.3
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHh-CCCe---EEEEEcC--cchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEECC
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIV-KRTR---IKALVKD--KRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS 170 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~-~g~~---V~~~~R~--~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~ 170 (305)
+.++|.|.||||.+|+++++.|.+ ...+ +..+... ..+... +... +...-++ |.+ .+.++|.||++.
T Consensus 4 ~~~~VaIvGATG~vG~ell~lL~~h~~f~v~~l~~~aS~~saGk~~~-~~~~-~l~v~~~-~~~----~~~~~Divf~a~ 76 (347)
T PRK06728 4 KGYHVAVVGATGAVGQKIIELLEKETKFNIAEVTLLSSKRSAGKTVQ-FKGR-EIIIQEA-KIN----SFEGVDIAFFSA 76 (347)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHCCCCCcccEEEEECcccCCCCee-eCCc-ceEEEeC-CHH----HhcCCCEEEECC
Confidence 347999999999999999999995 6666 5555433 222221 2111 2222223 333 247899999985
Q ss_pred cch----HhhhhhhcCCCEEEEEcccc
Q 021928 171 EGF----ISNAGSLKGVQHVILLSQLS 193 (305)
Q Consensus 171 ~g~----~~~~a~~~gv~~~V~iSS~~ 193 (305)
+.. +...+.+.|+ .+|=.|+..
T Consensus 77 ~~~~s~~~~~~~~~~G~-~VID~Ss~f 102 (347)
T PRK06728 77 GGEVSRQFVNQAVSSGA-IVIDNTSEY 102 (347)
T ss_pred ChHHHHHHHHHHHHCCC-EEEECchhh
Confidence 533 2333334553 455455543
|
|
| >cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like | Back alignment and domain information |
|---|
Probab=95.72 E-value=0.11 Score=46.24 Aligned_cols=91 Identities=13% Similarity=0.091 Sum_probs=58.4
Q ss_pred EEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcch---h-------------------h---hhcCC--CcEEeecCCC
Q 021928 100 AVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRN---A-------------------M---ESFGT--YVESMAGDAS 151 (305)
Q Consensus 100 ~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~---~-------------------~---~~~~~--~v~~v~~D~~ 151 (305)
+|+|.|+ |++|.++++.|+..|. ++.+++.+.-. + . ....+ +++.+..++.
T Consensus 1 kVlvvG~-GGlG~eilk~La~~Gvg~i~ivD~D~Ve~sNLnRQflf~~~dvGk~Ka~va~~~l~~~np~v~i~~~~~~i~ 79 (234)
T cd01484 1 KVLLVGA-GGIGCELLKNLALMGFGQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKSEVAAEAVNDRNPNCKVVPYQNKVG 79 (234)
T ss_pred CEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEEcchhhccccCCChhhCChHHHHHHHHHHHHHCCCCEEEEEeccCC
Confidence 5899996 8999999999999996 67777655211 0 0 01112 3556666675
Q ss_pred CHHH-HHHHhcCccEEEECCcch-----HhhhhhhcCCCEEEEEccc
Q 021928 152 NKKF-LKTALRGVRSIICPSEGF-----ISNAGSLKGVQHVILLSQL 192 (305)
Q Consensus 152 d~~~-~~~~~~~~d~Vi~~~~g~-----~~~~a~~~gv~~~V~iSS~ 192 (305)
+.+. -...++++|.||.+.+.. +.+.+...+++ +|..++.
T Consensus 80 ~~~~~~~~f~~~~DvVi~a~Dn~~aR~~ln~~c~~~~ip-lI~~g~~ 125 (234)
T cd01484 80 PEQDFNDTFFEQFHIIVNALDNIIARRYVNGMLIFLIVP-LIESGTE 125 (234)
T ss_pred hhhhchHHHHhCCCEEEECCCCHHHHHHHHHHHHHcCCC-EEEEccc
Confidence 4332 246788999999884432 55566777764 5555543
|
E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou |
| >PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ] | Back alignment and domain information |
|---|
Probab=95.70 E-value=0.015 Score=49.85 Aligned_cols=38 Identities=13% Similarity=0.085 Sum_probs=30.1
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh
Q 021928 99 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME 137 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~ 137 (305)
|+|.|.|. |++|..++..|++.|++|++++.++++...
T Consensus 1 M~I~ViGl-GyvGl~~A~~lA~~G~~V~g~D~~~~~v~~ 38 (185)
T PF03721_consen 1 MKIAVIGL-GYVGLPLAAALAEKGHQVIGVDIDEEKVEA 38 (185)
T ss_dssp -EEEEE---STTHHHHHHHHHHTTSEEEEE-S-HHHHHH
T ss_pred CEEEEECC-CcchHHHHHHHHhCCCEEEEEeCChHHHHH
Confidence 78999975 999999999999999999999999876443
|
The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D .... |
| >KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only] | Back alignment and domain information |
|---|
Probab=95.69 E-value=0.064 Score=50.51 Aligned_cols=75 Identities=15% Similarity=0.225 Sum_probs=49.5
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCC-CeEEEEEcCcch-hhhhcCCCcEEeecCCCCHHHHHHHhc----CccEEEE
Q 021928 95 PEARDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRN-AMESFGTYVESMAGDASNKKFLKTALR----GVRSIIC 168 (305)
Q Consensus 95 ~~~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~R~~~~-~~~~~~~~v~~v~~D~~d~~~~~~~~~----~~d~Vi~ 168 (305)
..+++.|||.||+|++|+..++-+...| .+|++.++.+.. ..+.++. -...|+.+.+-++...+ ++|+|+.
T Consensus 155 ~~~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~~l~k~lGA---d~vvdy~~~~~~e~~kk~~~~~~DvVlD 231 (347)
T KOG1198|consen 155 LSKGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKLELVKKLGA---DEVVDYKDENVVELIKKYTGKGVDVVLD 231 (347)
T ss_pred cCCCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchHHHHHHcCC---cEeecCCCHHHHHHHHhhcCCCccEEEE
Confidence 3456899999999999999999998999 455554444322 2223331 22357777554444444 6899998
Q ss_pred CCcc
Q 021928 169 PSEG 172 (305)
Q Consensus 169 ~~~g 172 (305)
+.++
T Consensus 232 ~vg~ 235 (347)
T KOG1198|consen 232 CVGG 235 (347)
T ss_pred CCCC
Confidence 8444
|
|
| >TIGR00936 ahcY adenosylhomocysteinase | Back alignment and domain information |
|---|
Probab=95.67 E-value=0.041 Score=52.84 Aligned_cols=67 Identities=16% Similarity=0.056 Sum_probs=50.1
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEECCc
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE 171 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~ 171 (305)
..+++|+|.|. |.||+.+++.+...|.+|+++.+++.+..+....++.++ + +.++++++|+||.+.+
T Consensus 193 l~Gk~VvViG~-G~IG~~vA~~ak~~Ga~ViV~d~dp~r~~~A~~~G~~v~-----~---leeal~~aDVVItaTG 259 (406)
T TIGR00936 193 IAGKTVVVAGY-GWCGKGIAMRARGMGARVIVTEVDPIRALEAAMDGFRVM-----T---MEEAAKIGDIFITATG 259 (406)
T ss_pred CCcCEEEEECC-CHHHHHHHHHHhhCcCEEEEEeCChhhHHHHHhcCCEeC-----C---HHHHHhcCCEEEECCC
Confidence 45799999996 999999999999999999999888866433332333332 1 2346788999998754
|
This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704). |
| >cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR) | Back alignment and domain information |
|---|
Probab=95.65 E-value=0.095 Score=47.36 Aligned_cols=95 Identities=15% Similarity=0.107 Sum_probs=59.2
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCH---HHHHHHh--cCccEEEECCc
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNK---KFLKTAL--RGVRSIICPSE 171 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~---~~~~~~~--~~~d~Vi~~~~ 171 (305)
++++|+|+|++|.+|..+++.+...|.+|+++++++++.......++..+ .|..+. +.+.+.. +++|.++.+.+
T Consensus 144 ~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~d~vi~~~~ 222 (325)
T cd08253 144 AGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAELVRQAGADAV-FNYRAEDLADRILAATAGQGVDVIIEVLA 222 (325)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEE-EeCCCcCHHHHHHHHcCCCceEEEEECCc
Confidence 46899999999999999999999999999999988765332211122221 233332 3333433 36899998754
Q ss_pred chHhhhh-hh-cCCCEEEEEccc
Q 021928 172 GFISNAG-SL-KGVQHVILLSQL 192 (305)
Q Consensus 172 g~~~~~a-~~-~gv~~~V~iSS~ 192 (305)
+...... +. ..-.++|.+++.
T Consensus 223 ~~~~~~~~~~l~~~g~~v~~~~~ 245 (325)
T cd08253 223 NVNLAKDLDVLAPGGRIVVYGSG 245 (325)
T ss_pred hHHHHHHHHhhCCCCEEEEEeec
Confidence 4322211 11 223578877654
|
Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts |
| >PRK06849 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=95.63 E-value=0.068 Score=50.97 Aligned_cols=38 Identities=11% Similarity=-0.007 Sum_probs=34.3
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcch
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN 134 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~ 134 (305)
++|+|||||++..+|..+++.|.+.|++|++++.++..
T Consensus 3 ~~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~~~ 40 (389)
T PRK06849 3 TKKTVLITGARAPAALELARLFHNAGHTVILADSLKYP 40 (389)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchH
Confidence 46999999999999999999999999999999887643
|
|
| >COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=95.62 E-value=0.028 Score=53.83 Aligned_cols=70 Identities=21% Similarity=0.219 Sum_probs=56.2
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCC-CeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEECC
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS 170 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~ 170 (305)
...++|||.|| |-+|.-++++|..+| .+|+++.|+.+++.+.... +. ++....+.+...+..+|+||.++
T Consensus 176 L~~~~vlvIGA-Gem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~-~~---~~~~~l~el~~~l~~~DvVissT 246 (414)
T COG0373 176 LKDKKVLVIGA-GEMGELVAKHLAEKGVKKITIANRTLERAEELAKK-LG---AEAVALEELLEALAEADVVISST 246 (414)
T ss_pred cccCeEEEEcc-cHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHH-hC---CeeecHHHHHHhhhhCCEEEEec
Confidence 45699999998 999999999999999 6899999998886644321 11 44555678889999999999883
|
|
| >PRK05442 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.62 E-value=0.033 Score=52.02 Aligned_cols=67 Identities=15% Similarity=0.044 Sum_probs=44.7
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCC-------eEEEEEcCcc--hhh----hhcC------CCcEEeecCCCCHHHHH
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRT-------RIKALVKDKR--NAM----ESFG------TYVESMAGDASNKKFLK 157 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~-------~V~~~~R~~~--~~~----~~~~------~~v~~v~~D~~d~~~~~ 157 (305)
++++|.|+||+|.+|+.++..|+..+. ++++++.++. ++. +... .++.+. ....
T Consensus 3 ~~~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~~~~~~~~i~-------~~~y 75 (326)
T PRK05442 3 APVRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEGVVMELDDCAFPLLAGVVIT-------DDPN 75 (326)
T ss_pred CCcEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccceeehhhhhhhhhhcCCcEEe-------cChH
Confidence 457999999999999999999998763 6888887542 111 1100 112211 1224
Q ss_pred HHhcCccEEEECC
Q 021928 158 TALRGVRSIICPS 170 (305)
Q Consensus 158 ~~~~~~d~Vi~~~ 170 (305)
+.++++|+||.++
T Consensus 76 ~~~~daDiVVita 88 (326)
T PRK05442 76 VAFKDADVALLVG 88 (326)
T ss_pred HHhCCCCEEEEeC
Confidence 6789999999773
|
|
| >PRK12921 2-dehydropantoate 2-reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.61 E-value=0.03 Score=51.27 Aligned_cols=69 Identities=13% Similarity=0.014 Sum_probs=44.1
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeec--CC----CCHHHHHHHhcCccEEEEC
Q 021928 99 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAG--DA----SNKKFLKTALRGVRSIICP 169 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~--D~----~d~~~~~~~~~~~d~Vi~~ 169 (305)
|+|+|.|+ |.+|..++..|.+.|++|.++.| +++.......++.+... +. .-.++..++.+.+|.||.+
T Consensus 1 mkI~IiG~-G~iG~~~a~~L~~~g~~V~~~~r-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vila 75 (305)
T PRK12921 1 MRIAVVGA-GAVGGTFGGRLLEAGRDVTFLVR-PKRAKALRERGLVIRSDHGDAVVPGPVITDPEELTGPFDLVILA 75 (305)
T ss_pred CeEEEECC-CHHHHHHHHHHHHCCCceEEEec-HHHHHHHHhCCeEEEeCCCeEEecceeecCHHHccCCCCEEEEE
Confidence 57999987 99999999999999999999999 54432221111221111 10 0011223445788999977
|
|
| >PF13380 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5A_A 2D59_A 2E6U_X 1IUL_A 1IUK_A 1Y81_A 2DUW_A | Back alignment and domain information |
|---|
Probab=95.60 E-value=0.03 Score=44.13 Aligned_cols=81 Identities=14% Similarity=0.148 Sum_probs=48.0
Q ss_pred CEEEEEcCC---ChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEECCc-c--
Q 021928 99 DAVLVTDGD---SDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE-G-- 172 (305)
Q Consensus 99 ~~vlVtGat---G~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~-g-- 172 (305)
|+|.|.|++ +..|..+.+.|.+.|++|+.+.-...... + ... . .++.+.=..+|.++.+.+ .
T Consensus 1 ksiAVvGaS~~~~~~g~~v~~~l~~~G~~v~~Vnp~~~~i~---G--~~~-y------~sl~e~p~~iDlavv~~~~~~~ 68 (116)
T PF13380_consen 1 KSIAVVGASDNPGKFGYRVLRNLKAAGYEVYPVNPKGGEIL---G--IKC-Y------PSLAEIPEPIDLAVVCVPPDKV 68 (116)
T ss_dssp -EEEEET--SSTTSHHHHHHHHHHHTT-EEEEESTTCSEET---T--EE--B------SSGGGCSST-SEEEE-S-HHHH
T ss_pred CEEEEEcccCCCCChHHHHHHHHHhCCCEEEEECCCceEEC---c--EEe-e------ccccCCCCCCCEEEEEcCHHHH
Confidence 589999998 77999999999999999998865542211 1 111 1 222221256788887733 2
Q ss_pred -hHhhhhhhcCCCEEEEEcc
Q 021928 173 -FISNAGSLKGVQHVILLSQ 191 (305)
Q Consensus 173 -~~~~~a~~~gv~~~V~iSS 191 (305)
.+.+.+.+.|++.+++.++
T Consensus 69 ~~~v~~~~~~g~~~v~~~~g 88 (116)
T PF13380_consen 69 PEIVDEAAALGVKAVWLQPG 88 (116)
T ss_dssp HHHHHHHHHHT-SEEEE-TT
T ss_pred HHHHHHHHHcCCCEEEEEcc
Confidence 2445566679999999887
|
|
| >PRK14027 quinate/shikimate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.60 E-value=0.039 Score=50.50 Aligned_cols=70 Identities=13% Similarity=0.203 Sum_probs=48.0
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcchhhhhc---CC--CcE-EeecCCCCHHHHHHHhcCccEEEEC
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESF---GT--YVE-SMAGDASNKKFLKTALRGVRSIICP 169 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~---~~--~v~-~v~~D~~d~~~~~~~~~~~d~Vi~~ 169 (305)
..++++|.|| |+.+++++..|++.|. +|.++.|+.+++.+.. .. ... +...+ ...+...+..+|.||++
T Consensus 126 ~~k~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~~~~~~~~~~~~~---~~~~~~~~~~~divINa 201 (283)
T PRK14027 126 KLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVD---ARGIEDVIAAADGVVNA 201 (283)
T ss_pred CCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhccCcceEEecC---HhHHHHHHhhcCEEEEc
Confidence 4589999998 9999999999999996 7889999987754432 11 111 11122 22334445678999988
Q ss_pred C
Q 021928 170 S 170 (305)
Q Consensus 170 ~ 170 (305)
+
T Consensus 202 T 202 (283)
T PRK14027 202 T 202 (283)
T ss_pred C
Confidence 3
|
|
| >cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity | Back alignment and domain information |
|---|
Probab=95.59 E-value=0.14 Score=46.93 Aligned_cols=95 Identities=15% Similarity=0.108 Sum_probs=58.9
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCC---HHHHHHHh-cCccEEEECCcc
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASN---KKFLKTAL-RGVRSIICPSEG 172 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d---~~~~~~~~-~~~d~Vi~~~~g 172 (305)
++.+|+|+||+|.+|..+++.+...|.+|+++++++++......-+++.+ .|..+ .+.+.+.. .++|+|+.+.++
T Consensus 143 ~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l~~~Ga~~v-i~~~~~~~~~~v~~~~~~gvd~vld~~g~ 221 (329)
T cd08294 143 AGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWLKELGFDAV-FNYKTVSLEEALKEAAPDGIDCYFDNVGG 221 (329)
T ss_pred CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEE-EeCCCccHHHHHHHHCCCCcEEEEECCCH
Confidence 46899999999999999999888999999999988766432211122222 23322 22333332 368999987554
Q ss_pred h-Hhhhhhh-cCCCEEEEEccc
Q 021928 173 F-ISNAGSL-KGVQHVILLSQL 192 (305)
Q Consensus 173 ~-~~~~a~~-~gv~~~V~iSS~ 192 (305)
. .....+. ..-.+||.++..
T Consensus 222 ~~~~~~~~~l~~~G~iv~~g~~ 243 (329)
T cd08294 222 EFSSTVLSHMNDFGRVAVCGSI 243 (329)
T ss_pred HHHHHHHHhhccCCEEEEEcch
Confidence 3 2222221 223478877654
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac |
| >PRK08040 putative semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.59 E-value=0.079 Score=49.68 Aligned_cols=87 Identities=16% Similarity=0.170 Sum_probs=50.9
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCC---eEEEEEcCcc--hhhhhcCC-CcEEeecCCCCHHHHHHHhcCccEEEECCc
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRT---RIKALVKDKR--NAMESFGT-YVESMAGDASNKKFLKTALRGVRSIICPSE 171 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~---~V~~~~R~~~--~~~~~~~~-~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~ 171 (305)
.++|.|.||||++|+++++.|.++.| ++..+....+ +... +.. .+.+. ++.. ..+.++|+||++.+
T Consensus 4 ~~~vaIvGATG~vG~ellrlL~~~~hP~~~l~~laS~~saG~~~~-~~~~~~~v~--~~~~-----~~~~~~Dvvf~a~p 75 (336)
T PRK08040 4 GWNIALLGATGAVGEALLELLAERQFPVGELYALASEESAGETLR-FGGKSVTVQ--DAAE-----FDWSQAQLAFFVAG 75 (336)
T ss_pred CCEEEEEccCCHHHHHHHHHHhcCCCCceEEEEEEccCcCCceEE-ECCcceEEE--eCch-----hhccCCCEEEECCC
Confidence 47999999999999999999998543 6666544321 1111 211 11111 3221 23478999999855
Q ss_pred ch----HhhhhhhcCCCEEEEEcccc
Q 021928 172 GF----ISNAGSLKGVQHVILLSQLS 193 (305)
Q Consensus 172 g~----~~~~a~~~gv~~~V~iSS~~ 193 (305)
.. +...+.+.|+ ++|=.|+..
T Consensus 76 ~~~s~~~~~~~~~~g~-~VIDlS~~f 100 (336)
T PRK08040 76 REASAAYAEEATNAGC-LVIDSSGLF 100 (336)
T ss_pred HHHHHHHHHHHHHCCC-EEEECChHh
Confidence 32 2333334555 466556543
|
|
| >PLN00203 glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=95.58 E-value=0.024 Score=56.20 Aligned_cols=70 Identities=13% Similarity=0.185 Sum_probs=51.8
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcchhhhhcC--CCcEEeecCCCCHHHHHHHhcCccEEEECC
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFG--TYVESMAGDASNKKFLKTALRGVRSIICPS 170 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~--~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~ 170 (305)
..++|+|.|+ |.+|+.+++.|...|. +|+++.|+.++...... .++.+.. ...+++.+++.++|+||.++
T Consensus 265 ~~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~i~~---~~~~dl~~al~~aDVVIsAT 337 (519)
T PLN00203 265 ASARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVEIIY---KPLDEMLACAAEADVVFTST 337 (519)
T ss_pred CCCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCceEe---ecHhhHHHHHhcCCEEEEcc
Confidence 4689999998 9999999999999996 79999999877543321 1222222 23345667889999999883
|
|
| >TIGR01759 MalateDH-SF1 malate dehydrogenase | Back alignment and domain information |
|---|
Probab=95.57 E-value=0.024 Score=52.87 Aligned_cols=74 Identities=12% Similarity=0.058 Sum_probs=46.0
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCC-------eEEEEEcCc--chhh----hhcCCCcEEeecCCCCHHHHHHHhcCc
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRT-------RIKALVKDK--RNAM----ESFGTYVESMAGDASNKKFLKTALRGV 163 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~-------~V~~~~R~~--~~~~----~~~~~~v~~v~~D~~d~~~~~~~~~~~ 163 (305)
++.+|.|+||+|.+|+.++..|+..+. ++++++.++ +++. +..... .....+..-.....+.++++
T Consensus 2 ~p~KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~-~~~~~~~~i~~~~~~~~~da 80 (323)
T TIGR01759 2 KPVRVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCA-FPLLAGVVATTDPEEAFKDV 80 (323)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHHHhhcc-ccccCCcEEecChHHHhCCC
Confidence 457999999999999999999998884 788888754 2211 111100 00000110001234678999
Q ss_pred cEEEECCc
Q 021928 164 RSIICPSE 171 (305)
Q Consensus 164 d~Vi~~~~ 171 (305)
|+||.+++
T Consensus 81 DvVVitAG 88 (323)
T TIGR01759 81 DAALLVGA 88 (323)
T ss_pred CEEEEeCC
Confidence 99998733
|
This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms. |
| >COG0240 GpsA Glycerol-3-phosphate dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=95.56 E-value=0.067 Score=49.65 Aligned_cols=73 Identities=14% Similarity=0.100 Sum_probs=54.9
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcC--CCcEEee-----cCCCCHHHHHHHhcCccEEEECC
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG--TYVESMA-----GDASNKKFLKTALRGVRSIICPS 170 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~--~~v~~v~-----~D~~d~~~~~~~~~~~d~Vi~~~ 170 (305)
+++|.|.|| |.=|.+|+..|++.||+|++..|+++...+... .+.++++ .++.-..++.++++++|.|+.+.
T Consensus 1 ~~kI~ViGa-GswGTALA~~la~ng~~V~lw~r~~~~~~~i~~~~~N~~yLp~i~lp~~l~at~Dl~~a~~~ad~iv~av 79 (329)
T COG0240 1 MMKIAVIGA-GSWGTALAKVLARNGHEVRLWGRDEEIVAEINETRENPKYLPGILLPPNLKATTDLAEALDGADIIVIAV 79 (329)
T ss_pred CceEEEEcC-ChHHHHHHHHHHhcCCeeEEEecCHHHHHHHHhcCcCccccCCccCCcccccccCHHHHHhcCCEEEEEC
Confidence 478999998 888999999999999999999999876443322 2333333 22223456889999999999885
Q ss_pred c
Q 021928 171 E 171 (305)
Q Consensus 171 ~ 171 (305)
+
T Consensus 80 P 80 (329)
T COG0240 80 P 80 (329)
T ss_pred C
Confidence 5
|
|
| >PRK07877 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=95.54 E-value=0.098 Score=53.83 Aligned_cols=93 Identities=14% Similarity=0.212 Sum_probs=64.7
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCC--eEEEEEcCcch---------------------hh---hhcCC--CcEEe
Q 021928 95 PEARDAVLVTDGDSDIGQMVILSLIVKRT--RIKALVKDKRN---------------------AM---ESFGT--YVESM 146 (305)
Q Consensus 95 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~R~~~~---------------------~~---~~~~~--~v~~v 146 (305)
.....+|+|.|+ | +|+.++..|+..|. ++++++.+.-. +. ..+.+ +++.+
T Consensus 104 ~L~~~~V~IvG~-G-lGs~~a~~LaraGvvG~l~lvD~D~ve~sNLnRq~~~~~diG~~Kv~~a~~~l~~inp~i~v~~~ 181 (722)
T PRK07877 104 RLGRLRIGVVGL-S-VGHAIAHTLAAEGLCGELRLADFDTLELSNLNRVPAGVFDLGVNKAVVAARRIAELDPYLPVEVF 181 (722)
T ss_pred HHhcCCEEEEEe-c-HHHHHHHHHHHccCCCeEEEEcCCEEcccccccccCChhhcccHHHHHHHHHHHHHCCCCEEEEE
Confidence 345699999999 7 99999999999994 78877654211 00 01123 45566
Q ss_pred ecCCCCHHHHHHHhcCccEEEECCcch-----HhhhhhhcCCCEEEEEcc
Q 021928 147 AGDASNKKFLKTALRGVRSIICPSEGF-----ISNAGSLKGVQHVILLSQ 191 (305)
Q Consensus 147 ~~D~~d~~~~~~~~~~~d~Vi~~~~g~-----~~~~a~~~gv~~~V~iSS 191 (305)
...++ .+.+.+.+.++|.||.+...+ +.++|.+.+++ +|+.++
T Consensus 182 ~~~i~-~~n~~~~l~~~DlVvD~~D~~~~R~~ln~~a~~~~iP-~i~~~~ 229 (722)
T PRK07877 182 TDGLT-EDNVDAFLDGLDVVVEECDSLDVKVLLREAARARRIP-VLMATS 229 (722)
T ss_pred eccCC-HHHHHHHhcCCCEEEECCCCHHHHHHHHHHHHHcCCC-EEEEcC
Confidence 66665 578899999999999886544 55667777775 445443
|
|
| >PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins | Back alignment and domain information |
|---|
Probab=95.54 E-value=0.015 Score=46.73 Aligned_cols=69 Identities=13% Similarity=0.130 Sum_probs=40.9
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEE-EcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEECCc
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKAL-VKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE 171 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~-~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~ 171 (305)
..+++|.|.|+ |.+|.+|.+.|.+.||+|..+ +|+.+........ ..+. ...++.+.++.+|.+|++.+
T Consensus 8 ~~~l~I~iIGa-GrVG~~La~aL~~ag~~v~~v~srs~~sa~~a~~~-----~~~~-~~~~~~~~~~~aDlv~iavp 77 (127)
T PF10727_consen 8 AARLKIGIIGA-GRVGTALARALARAGHEVVGVYSRSPASAERAAAF-----IGAG-AILDLEEILRDADLVFIAVP 77 (127)
T ss_dssp ----EEEEECT-SCCCCHHHHHHHHTTSEEEEESSCHH-HHHHHHC-------TT------TTGGGCC-SEEEE-S-
T ss_pred CCccEEEEECC-CHHHHHHHHHHHHCCCeEEEEEeCCcccccccccc-----cccc-cccccccccccCCEEEEEec
Confidence 35689999998 999999999999999999987 4655443322110 0111 11223456788899998843
|
This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A. |
| >PLN03154 putative allyl alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.52 E-value=0.11 Score=48.74 Aligned_cols=94 Identities=14% Similarity=0.106 Sum_probs=58.2
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh---hcCCCcEEeecCCC---CH-HHHHHHh-cCccEEE
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDAS---NK-KFLKTAL-RGVRSII 167 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~---~~~~~v~~v~~D~~---d~-~~~~~~~-~~~d~Vi 167 (305)
.++.+|||+||+|.+|...++.+...|.+|+++++++++... .++ ++.+ .|.. +. +.+.+.. .++|+++
T Consensus 157 ~~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~~lG--a~~v-i~~~~~~~~~~~i~~~~~~gvD~v~ 233 (348)
T PLN03154 157 KKGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLG--FDEA-FNYKEEPDLDAALKRYFPEGIDIYF 233 (348)
T ss_pred CCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhcC--CCEE-EECCCcccHHHHHHHHCCCCcEEEE
Confidence 346899999999999999998888899999998888766432 233 2222 1222 21 2233322 3689999
Q ss_pred ECCcchH-hhhhhh-cCCCEEEEEccc
Q 021928 168 CPSEGFI-SNAGSL-KGVQHVILLSQL 192 (305)
Q Consensus 168 ~~~~g~~-~~~a~~-~gv~~~V~iSS~ 192 (305)
.+.++.. ....+. ..-.++|.++..
T Consensus 234 d~vG~~~~~~~~~~l~~~G~iv~~G~~ 260 (348)
T PLN03154 234 DNVGGDMLDAALLNMKIHGRIAVCGMV 260 (348)
T ss_pred ECCCHHHHHHHHHHhccCCEEEEECcc
Confidence 8755432 222221 222478877643
|
|
| >TIGR01142 purT phosphoribosylglycinamide formyltransferase 2 | Back alignment and domain information |
|---|
Probab=95.52 E-value=0.058 Score=51.10 Aligned_cols=67 Identities=12% Similarity=0.118 Sum_probs=52.9
Q ss_pred EEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhc--CccEEEEC
Q 021928 100 AVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--GVRSIICP 169 (305)
Q Consensus 100 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~--~~d~Vi~~ 169 (305)
+|+|.|+ |..|..+++.+.+.|++|++++.++......+.+ +.+..|..|.+.+.+..+ ++|.|+..
T Consensus 1 kililG~-g~~~~~l~~aa~~~G~~v~~~d~~~~~~~~~~ad--~~~~~~~~d~~~l~~~~~~~~id~v~~~ 69 (380)
T TIGR01142 1 RVLLLGS-GELGKEVAIEAQRLGVEVIAVDRYANAPAMQVAH--RSYVINMLDGDALRAVIEREKPDYIVPE 69 (380)
T ss_pred CEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCCCCchhhhCc--eEEEcCCCCHHHHHHHHHHhCCCEEEec
Confidence 5899996 9999999999999999999999886543222322 456678889999888877 78988854
|
This enzyme is an alternative to PurN (TIGR00639) |
| >KOG0172 consensus Lysine-ketoglutarate reductase/saccharopine dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.51 E-value=0.02 Score=53.86 Aligned_cols=74 Identities=12% Similarity=0.155 Sum_probs=63.2
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCC-CeEEEEEcCcchhhhhcC-CCcEEeecCCCCHH-HHHHHhcCccEEEECCcc
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAMESFG-TYVESMAGDASNKK-FLKTALRGVRSIICPSEG 172 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~R~~~~~~~~~~-~~v~~v~~D~~d~~-~~~~~~~~~d~Vi~~~~g 172 (305)
++.||+.|+ |++-+.++..|.+++ .+|++.+|...++++... .+++.|..|+.+.+ .+++..+..|.|+...+.
T Consensus 2 ~~~vlllgs-g~v~~p~~d~ls~~~dv~vtva~~~~~~~~~~~~~~~~~av~ldv~~~~~~L~~~v~~~D~viSLlP~ 78 (445)
T KOG0172|consen 2 KKGVLLLGS-GFVSRPVADFLSRKKDVNVTVASRTLKDAEALVKGINIKAVSLDVADEELALRKEVKPLDLVISLLPY 78 (445)
T ss_pred CcceEEecC-ccccchHHHHHhhcCCceEEEehhhHHHHHHHhcCCCccceEEEccchHHHHHhhhcccceeeeeccc
Confidence 588999996 999999999999887 589999998877766544 46999999999987 899999999999977553
|
|
| >PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt | Back alignment and domain information |
|---|
Probab=95.51 E-value=0.15 Score=45.83 Aligned_cols=89 Identities=17% Similarity=0.134 Sum_probs=64.8
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcc--hhhhhcCCCcEEeecCCCCHHHHHHHhc--CccEEEECCcc--
Q 021928 99 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR--NAMESFGTYVESMAGDASNKKFLKTALR--GVRSIICPSEG-- 172 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~--~~~~~~~~~v~~v~~D~~d~~~~~~~~~--~~d~Vi~~~~g-- 172 (305)
|+|||.|||+ =|+.++..|.++|+ |++-+-..- .........+.++.+-+.+.+.+...++ +++.||.++-.
T Consensus 1 m~ILvlgGTt-E~r~la~~L~~~g~-v~~sv~t~~g~~~~~~~~~~~~v~~G~lg~~~~l~~~l~~~~i~~vIDATHPfA 78 (249)
T PF02571_consen 1 MKILVLGGTT-EGRKLAERLAEAGY-VIVSVATSYGGELLKPELPGLEVRVGRLGDEEGLAEFLRENGIDAVIDATHPFA 78 (249)
T ss_pred CEEEEEechH-HHHHHHHHHHhcCC-EEEEEEhhhhHhhhccccCCceEEECCCCCHHHHHHHHHhCCCcEEEECCCchH
Confidence 7999999987 59999999999998 554333221 1221122457888898889999999985 78999987432
Q ss_pred -----hHhhhhhhcCCCEEEEE
Q 021928 173 -----FISNAGSLKGVQHVILL 189 (305)
Q Consensus 173 -----~~~~~a~~~gv~~~V~i 189 (305)
....+|++.|++.+=|-
T Consensus 79 ~~is~na~~a~~~~~ipylR~e 100 (249)
T PF02571_consen 79 AEISQNAIEACRELGIPYLRFE 100 (249)
T ss_pred HHHHHHHHHHHhhcCcceEEEE
Confidence 35667888888766655
|
Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process |
| >COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.50 E-value=0.062 Score=50.23 Aligned_cols=94 Identities=13% Similarity=0.103 Sum_probs=60.8
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEECCcch-
Q 021928 95 PEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEGF- 173 (305)
Q Consensus 95 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~g~- 173 (305)
..++++|+|+|+. ++|..-++.+...|.+|++++|++++.+....-+.+.+.. ..|.+.+++.-+.+|+++.+.+..
T Consensus 164 ~~pG~~V~I~G~G-GlGh~avQ~Aka~ga~Via~~~~~~K~e~a~~lGAd~~i~-~~~~~~~~~~~~~~d~ii~tv~~~~ 241 (339)
T COG1064 164 VKPGKWVAVVGAG-GLGHMAVQYAKAMGAEVIAITRSEEKLELAKKLGADHVIN-SSDSDALEAVKEIADAIIDTVGPAT 241 (339)
T ss_pred CCCCCEEEEECCc-HHHHHHHHHHHHcCCeEEEEeCChHHHHHHHHhCCcEEEE-cCCchhhHHhHhhCcEEEECCChhh
Confidence 3567999999995 9999998888889999999999998864322211222222 225444444444489999875432
Q ss_pred Hh---hhhhhcCCCEEEEEccc
Q 021928 174 IS---NAGSLKGVQHVILLSQL 192 (305)
Q Consensus 174 ~~---~~a~~~gv~~~V~iSS~ 192 (305)
+. ++.+..| ++|.+.-.
T Consensus 242 ~~~~l~~l~~~G--~~v~vG~~ 261 (339)
T COG1064 242 LEPSLKALRRGG--TLVLVGLP 261 (339)
T ss_pred HHHHHHHHhcCC--EEEEECCC
Confidence 22 2233333 67777654
|
|
| >PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=95.50 E-value=0.026 Score=51.65 Aligned_cols=37 Identities=11% Similarity=0.024 Sum_probs=33.9
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchh
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA 135 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~ 135 (305)
.++|.|.|+ |.+|..++..|+..|++|++.+++++..
T Consensus 5 ~~~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~~ 41 (286)
T PRK07819 5 IQRVGVVGA-GQMGAGIAEVCARAGVDVLVFETTEELA 41 (286)
T ss_pred ccEEEEEcc-cHHHHHHHHHHHhCCCEEEEEECCHHHH
Confidence 468999998 9999999999999999999999998763
|
|
| >COG2130 Putative NADP-dependent oxidoreductases [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.49 E-value=0.045 Score=50.05 Aligned_cols=102 Identities=16% Similarity=0.122 Sum_probs=66.3
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcC-CCcEEeecCCCC---HHHHHHHh-cCccEEEECC
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG-TYVESMAGDASN---KKFLKTAL-RGVRSIICPS 170 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~-~~v~~v~~D~~d---~~~~~~~~-~~~d~Vi~~~ 170 (305)
+.+.+|+|++|+|-+|+-+.+-..-+|++|+.+.-.++|-.-... .++. ...|..+ .+.+.++. +|+|+.|-+.
T Consensus 149 k~GetvvVSaAaGaVGsvvgQiAKlkG~rVVGiaGg~eK~~~l~~~lGfD-~~idyk~~d~~~~L~~a~P~GIDvyfeNV 227 (340)
T COG2130 149 KAGETVVVSAAAGAVGSVVGQIAKLKGCRVVGIAGGAEKCDFLTEELGFD-AGIDYKAEDFAQALKEACPKGIDVYFENV 227 (340)
T ss_pred CCCCEEEEEecccccchHHHHHHHhhCCeEEEecCCHHHHHHHHHhcCCc-eeeecCcccHHHHHHHHCCCCeEEEEEcC
Confidence 346999999999999997776666789999999999887322111 0111 1123333 23444444 5789999887
Q ss_pred cchHhhhhhh-c-CCCEEEEEcccccccCC
Q 021928 171 EGFISNAGSL-K-GVQHVILLSQLSVYRGS 198 (305)
Q Consensus 171 ~g~~~~~a~~-~-gv~~~V~iSS~~~~~~~ 198 (305)
++.+.+++-. . ---||++..-++.|+.+
T Consensus 228 Gg~v~DAv~~~ln~~aRi~~CG~IS~YN~~ 257 (340)
T COG2130 228 GGEVLDAVLPLLNLFARIPVCGAISQYNAP 257 (340)
T ss_pred CchHHHHHHHhhccccceeeeeehhhcCCC
Confidence 7776666432 2 22377777777777654
|
|
| >PRK06444 prephenate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.49 E-value=0.029 Score=48.58 Aligned_cols=28 Identities=7% Similarity=0.075 Sum_probs=26.4
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCCeEE
Q 021928 99 DAVLVTDGDSDIGQMVILSLIVKRTRIK 126 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~~~g~~V~ 126 (305)
|+|.|.||+|.+|+.+++.|.+.|+.|.
T Consensus 1 ~~~~iiG~~G~mG~~~~~~~~~~g~~v~ 28 (197)
T PRK06444 1 MMEIIIGKNGRLGRVLCSILDDNGLGVY 28 (197)
T ss_pred CEEEEEecCCcHHHHHHHHHHhCCCEEE
Confidence 5899999999999999999999999986
|
|
| >PRK15461 NADH-dependent gamma-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.48 E-value=0.031 Score=51.36 Aligned_cols=63 Identities=10% Similarity=0.064 Sum_probs=43.9
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEEC
Q 021928 99 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 169 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~ 169 (305)
++|.|.|. |.+|..+++.|++.|++|.+..|++++..+....++. ...+..++++++|+||.+
T Consensus 2 ~~Ig~IGl-G~mG~~mA~~l~~~G~~V~v~d~~~~~~~~~~~~g~~-------~~~s~~~~~~~aDvVi~~ 64 (296)
T PRK15461 2 AAIAFIGL-GQMGSPMASNLLKQGHQLQVFDVNPQAVDALVDKGAT-------PAASPAQAAAGAEFVITM 64 (296)
T ss_pred CeEEEEee-CHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHcCCc-------ccCCHHHHHhcCCEEEEe
Confidence 57999985 9999999999999999999999998765433221111 111233455666766655
|
|
| >PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=95.48 E-value=0.057 Score=49.39 Aligned_cols=55 Identities=11% Similarity=0.128 Sum_probs=43.9
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEECC
Q 021928 95 PEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS 170 (305)
Q Consensus 95 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~ 170 (305)
+..+++|+|.|++|.+|+.++..|+++|.+|.++.|.. ..+.+.++++|.||.++
T Consensus 156 ~l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~t---------------------~~L~~~~~~aDIvI~At 210 (283)
T PRK14192 156 ELAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSRT---------------------QNLPELVKQADIIVGAV 210 (283)
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCCc---------------------hhHHHHhccCCEEEEcc
Confidence 45679999999999999999999999999888877632 23445557888888774
|
|
| >PRK08229 2-dehydropantoate 2-reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.46 E-value=0.048 Score=50.90 Aligned_cols=35 Identities=11% Similarity=0.111 Sum_probs=32.0
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCc
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK 132 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 132 (305)
++|+|.|.|+ |.+|..++..|.+.|++|.++.|++
T Consensus 1 ~~mkI~IiG~-G~mG~~~A~~L~~~G~~V~~~~r~~ 35 (341)
T PRK08229 1 MMARICVLGA-GSIGCYLGGRLAAAGADVTLIGRAR 35 (341)
T ss_pred CCceEEEECC-CHHHHHHHHHHHhcCCcEEEEecHH
Confidence 4588999986 9999999999999999999999975
|
|
| >PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated | Back alignment and domain information |
|---|
Probab=95.46 E-value=0.041 Score=54.38 Aligned_cols=73 Identities=11% Similarity=-0.022 Sum_probs=49.3
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcC---------CCcE---E-eecCCCCHHHHHHHhcCcc
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG---------TYVE---S-MAGDASNKKFLKTALRGVR 164 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~---------~~v~---~-v~~D~~d~~~~~~~~~~~d 164 (305)
.++|.|.|+ |.+|+.++..|+..|++|++..+++++...... .+.. . ..+.+.-.+++.++++++|
T Consensus 4 i~kIavIG~-G~MG~~iA~~la~~G~~V~v~D~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~i~~~~~~~ea~~~aD 82 (495)
T PRK07531 4 IMKAACIGG-GVIGGGWAARFLLAGIDVAVFDPHPEAERIIGEVLANAERAYAMLTDAPLPPEGRLTFCASLAEAVAGAD 82 (495)
T ss_pred cCEEEEECc-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHhhhccchhhhhhceEeeCCHHHHhcCCC
Confidence 368999986 999999999999999999999998876432100 0000 0 0011111234667889999
Q ss_pred EEEECCc
Q 021928 165 SIICPSE 171 (305)
Q Consensus 165 ~Vi~~~~ 171 (305)
.|+.+.+
T Consensus 83 ~Vieavp 89 (495)
T PRK07531 83 WIQESVP 89 (495)
T ss_pred EEEEcCc
Confidence 9997733
|
|
| >TIGR01745 asd_gamma aspartate-semialdehyde dehydrogenase, gamma-proteobacterial | Back alignment and domain information |
|---|
Probab=95.46 E-value=0.095 Score=49.56 Aligned_cols=89 Identities=19% Similarity=0.109 Sum_probs=51.5
Q ss_pred CEEEEEcCCChHHHHHHHHHH-hCCCe---EEEEEcCcc-hhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEECCcch
Q 021928 99 DAVLVTDGDSDIGQMVILSLI-VKRTR---IKALVKDKR-NAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEGF 173 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~-~~g~~---V~~~~R~~~-~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~g~ 173 (305)
++|.|.||||.+|+.+++.|. ++.+. +++++.... ...-.+.. .....-++.+. ..+.++|.+|+++++.
T Consensus 1 ~~VavvGATG~VG~~ll~~L~~e~~fp~~~~~~~ss~~s~g~~~~f~~-~~~~v~~~~~~----~~~~~vDivffa~g~~ 75 (366)
T TIGR01745 1 KNVGLVGWRGMVGSVLMQRMQEERDFDAIRPVFFSTSQLGQAAPSFGG-TTGTLQDAFDI----DALKALDIIITCQGGD 75 (366)
T ss_pred CeEEEEcCcCHHHHHHHHHHHhCCCCccccEEEEEchhhCCCcCCCCC-CcceEEcCccc----ccccCCCEEEEcCCHH
Confidence 479999999999999999999 55654 344433211 11111221 12233344332 2467999999986654
Q ss_pred ----HhhhhhhcCCC-EEEEEccc
Q 021928 174 ----ISNAGSLKGVQ-HVILLSQL 192 (305)
Q Consensus 174 ----~~~~a~~~gv~-~~V~iSS~ 192 (305)
+...+.++|.. .+|=-||.
T Consensus 76 ~s~~~~p~~~~aG~~~~VIDnSSa 99 (366)
T TIGR01745 76 YTNEIYPKLRESGWQGYWIDAASS 99 (366)
T ss_pred HHHHHHHHHHhCCCCeEEEECChh
Confidence 44445667754 33333443
|
|
| >PRK07417 arogenate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=95.43 E-value=0.031 Score=50.89 Aligned_cols=66 Identities=11% Similarity=0.080 Sum_probs=46.2
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEECCc
Q 021928 99 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE 171 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~ 171 (305)
|+|.|.| .|.+|..+++.|.++|++|.+..|+++........+.. .....+ . +.++++|.||.+.+
T Consensus 1 m~I~IIG-~G~mG~sla~~L~~~g~~V~~~d~~~~~~~~a~~~g~~--~~~~~~---~-~~~~~aDlVilavp 66 (279)
T PRK07417 1 MKIGIVG-LGLIGGSLGLDLRSLGHTVYGVSRRESTCERAIERGLV--DEASTD---L-SLLKDCDLVILALP 66 (279)
T ss_pred CeEEEEe-ecHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCc--ccccCC---H-hHhcCCCEEEEcCC
Confidence 4799999 59999999999999999999999987664433222110 000111 1 34678999998854
|
|
| >PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.42 E-value=0.03 Score=54.07 Aligned_cols=39 Identities=8% Similarity=0.072 Sum_probs=35.2
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME 137 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~ 137 (305)
+++|.|.|. |.+|..++..|+++|++|+++.+++++...
T Consensus 3 ~~kI~VIGl-G~~G~~~A~~La~~G~~V~~~D~~~~~v~~ 41 (415)
T PRK11064 3 FETISVIGL-GYIGLPTAAAFASRQKQVIGVDINQHAVDT 41 (415)
T ss_pred ccEEEEECc-chhhHHHHHHHHhCCCEEEEEeCCHHHHHH
Confidence 478999986 999999999999999999999999887554
|
|
| >cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=95.38 E-value=0.16 Score=46.32 Aligned_cols=97 Identities=12% Similarity=0.073 Sum_probs=60.0
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHH---HHHHh--cCccEEEECCc
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKF---LKTAL--RGVRSIICPSE 171 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~---~~~~~--~~~d~Vi~~~~ 171 (305)
++.+++|+|+++.+|..+++.+...|++|+.+++++++........... ..|..+.+. +.... .++|.++.+.+
T Consensus 166 ~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~d~~i~~~g 244 (342)
T cd08266 166 PGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERAKELGADY-VIDYRKEDFVREVRELTGKRGVDVVVEHVG 244 (342)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCe-EEecCChHHHHHHHHHhCCCCCcEEEECCc
Confidence 4589999999999999999999999999999988875533221111221 234444332 23333 25799998755
Q ss_pred chHh-hhhhh-cCCCEEEEEccccc
Q 021928 172 GFIS-NAGSL-KGVQHVILLSQLSV 194 (305)
Q Consensus 172 g~~~-~~a~~-~gv~~~V~iSS~~~ 194 (305)
+... .+.+. ..-.++|.+++...
T Consensus 245 ~~~~~~~~~~l~~~G~~v~~~~~~~ 269 (342)
T cd08266 245 AATWEKSLKSLARGGRLVTCGATTG 269 (342)
T ss_pred HHHHHHHHHHhhcCCEEEEEecCCC
Confidence 4321 11111 12257888876543
|
This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone |
| >PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=95.38 E-value=0.097 Score=50.73 Aligned_cols=67 Identities=12% Similarity=0.009 Sum_probs=44.9
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchh----hhhcCCCcEEeecCCCCHHHHHHHhc-CccEEEEC
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA----MESFGTYVESMAGDASNKKFLKTALR-GVRSIICP 169 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~----~~~~~~~v~~v~~D~~d~~~~~~~~~-~~d~Vi~~ 169 (305)
.+++|+|||+.+ +|..+++.|++.|++|.+..++.... ......++++..+... .. .+. ++|.||..
T Consensus 4 ~~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l~~~g~~~~~~~~~--~~---~~~~~~d~vV~s 75 (447)
T PRK02472 4 QNKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSENPEAQELLEEGIKVICGSHP--LE---LLDEDFDLMVKN 75 (447)
T ss_pred CCCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccchhHHHHHHhcCCEEEeCCCC--HH---HhcCcCCEEEEC
Confidence 358999999966 99999999999999999988764321 1122224555544322 11 133 48988876
|
|
| >cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases | Back alignment and domain information |
|---|
Probab=95.36 E-value=0.042 Score=50.90 Aligned_cols=70 Identities=20% Similarity=0.156 Sum_probs=45.4
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCC--CeEEEEEcCcch--hhhhcCC--CcEEeecCCCCHHHHHHHhcCccEEEECC
Q 021928 99 DAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRN--AMESFGT--YVESMAGDASNKKFLKTALRGVRSIICPS 170 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~~~g--~~V~~~~R~~~~--~~~~~~~--~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~ 170 (305)
|+|.|+||+|.+|+.++..|+..+ .++++++.+..+ ..+.... ...+.... ..+++.+.++++|+||.++
T Consensus 1 ~KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~~a~g~alDL~~~~~~~~i~~~~--~~~~~y~~~~daDivvita 76 (310)
T cd01337 1 VKVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIVNTPGVAADLSHINTPAKVTGYL--GPEELKKALKGADVVVIPA 76 (310)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecCccceeehHhHhCCCcceEEEec--CCCchHHhcCCCCEEEEeC
Confidence 589999999999999999999888 478888876111 1111111 11221110 1123567799999999873
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase | Back alignment and domain information |
|---|
Probab=95.35 E-value=0.069 Score=43.62 Aligned_cols=55 Identities=13% Similarity=0.063 Sum_probs=45.7
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEECC
Q 021928 95 PEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS 170 (305)
Q Consensus 95 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~ 170 (305)
+..+++|+|.|.+.-+|+.++..|.++|.+|..+.++.. +++++++.+|+|+.+.
T Consensus 25 ~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t~---------------------~l~~~v~~ADIVvsAt 79 (140)
T cd05212 25 RLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKTI---------------------QLQSKVHDADVVVVGS 79 (140)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCCc---------------------CHHHHHhhCCEEEEec
Confidence 445799999999999999999999999999988765431 3556788999999883
|
NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional |
| >PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1 | Back alignment and domain information |
|---|
Probab=95.34 E-value=0.033 Score=46.76 Aligned_cols=72 Identities=10% Similarity=-0.062 Sum_probs=48.3
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCC------------------C-CHHHHH
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDA------------------S-NKKFLK 157 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~------------------~-d~~~~~ 157 (305)
++.+|+|+|+ |.+|..-++.|...|++|+.+...+....+........+..+. . +...+.
T Consensus 19 ~p~~vvv~G~-G~vg~gA~~~~~~lGa~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~ 97 (168)
T PF01262_consen 19 PPAKVVVTGA-GRVGQGAAEIAKGLGAEVVVPDERPERLRQLESLGAYFIEVDYEDHLERKDFDKADYYEHPESYESNFA 97 (168)
T ss_dssp -T-EEEEEST-SHHHHHHHHHHHHTT-EEEEEESSHHHHHHHHHTTTEESEETTTTTTTSB-CCHHHCHHHCCHHHHHHH
T ss_pred CCeEEEEECC-CHHHHHHHHHHhHCCCEEEeccCCHHHHHhhhcccCceEEEcccccccccccchhhhhHHHHHhHHHHH
Confidence 4689999995 9999999999999999999999887654333222233333331 1 234566
Q ss_pred HHhcCccEEEEC
Q 021928 158 TALRGVRSIICP 169 (305)
Q Consensus 158 ~~~~~~d~Vi~~ 169 (305)
+.+..+|.||.+
T Consensus 98 ~~i~~~d~vI~~ 109 (168)
T PF01262_consen 98 EFIAPADIVIGN 109 (168)
T ss_dssp HHHHH-SEEEEH
T ss_pred HHHhhCcEEeee
Confidence 777788998865
|
4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A .... |
| >TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase | Back alignment and domain information |
|---|
Probab=95.32 E-value=0.028 Score=51.35 Aligned_cols=63 Identities=10% Similarity=-0.023 Sum_probs=45.6
Q ss_pred EEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEECC
Q 021928 100 AVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS 170 (305)
Q Consensus 100 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~ 170 (305)
+|.|.|. |.+|+.+++.|++.|++|++..|++++.......+.. ..++..++++++|+||.+.
T Consensus 1 ~IgvIG~-G~mG~~iA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~-------~~~~~~~~~~~aDivi~~v 63 (291)
T TIGR01505 1 KVGFIGL-GIMGSPMSINLAKAGYQLHVTTIGPEVADELLAAGAV-------TAETARQVTEQADVIFTMV 63 (291)
T ss_pred CEEEEEe-cHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCc-------ccCCHHHHHhcCCEEEEec
Confidence 4788885 9999999999999999999999998765433222111 1123456777888888763
|
This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism. |
| >PLN02928 oxidoreductase family protein | Back alignment and domain information |
|---|
Probab=95.31 E-value=0.052 Score=51.14 Aligned_cols=74 Identities=9% Similarity=0.022 Sum_probs=50.5
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh---cC-CCcEEeecCCCCHHHHHHHhcCccEEEECC
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FG-TYVESMAGDASNKKFLKTALRGVRSIICPS 170 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~~-~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~ 170 (305)
..+++|.|.|- |.||+.+++.|...|.+|++..|+....... ++ ..+..+........++.+++..+|+|+++.
T Consensus 157 l~gktvGIiG~-G~IG~~vA~~l~afG~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~ell~~aDiVvl~l 234 (347)
T PLN02928 157 LFGKTVFILGY-GAIGIELAKRLRPFGVKLLATRRSWTSEPEDGLLIPNGDVDDLVDEKGGHEDIYEFAGEADIVVLCC 234 (347)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHhhCCCEEEEECCCCChhhhhhhccccccccccccccCcccCHHHHHhhCCEEEECC
Confidence 35699999997 9999999999999999999998864321111 00 011111111113457889999999999763
|
|
| >PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed | Back alignment and domain information |
|---|
Probab=95.29 E-value=0.029 Score=55.13 Aligned_cols=70 Identities=13% Similarity=0.076 Sum_probs=47.4
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEECCc
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE 171 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~ 171 (305)
..+++++|+|+ |++|++++..|.+.|++|++..|+.++..+.... ......++.+ +. .+.++|.||++.+
T Consensus 330 ~~~k~vlIiGa-GgiG~aia~~L~~~G~~V~i~~R~~~~~~~la~~-~~~~~~~~~~---~~-~l~~~DiVInatP 399 (477)
T PRK09310 330 LNNQHVAIVGA-GGAAKAIATTLARAGAELLIFNRTKAHAEALASR-CQGKAFPLES---LP-ELHRIDIIINCLP 399 (477)
T ss_pred cCCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH-hccceechhH---hc-ccCCCCEEEEcCC
Confidence 34689999996 8999999999999999999999987664432211 1101122222 21 2568899998843
|
|
| >PRK12749 quinate/shikimate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=95.29 E-value=0.066 Score=49.12 Aligned_cols=74 Identities=8% Similarity=0.074 Sum_probs=49.2
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcc---hhhhh---cCCC--cEEeecCCCCHHHHHHHhcCccEE
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKR---NAMES---FGTY--VESMAGDASNKKFLKTALRGVRSI 166 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~---~~~~~---~~~~--v~~v~~D~~d~~~~~~~~~~~d~V 166 (305)
...++++|.|| |+.+++++..|+..|. +|.++.|+++ ++.+. +... ..+...++.+.+.+...+..+|.|
T Consensus 122 ~~~k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~~~~~~~~~~~~~~~~~~l~~~~~~aDiv 200 (288)
T PRK12749 122 IKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALASADIL 200 (288)
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhhhccCceEEEechhhhhhhhhhcccCCEE
Confidence 34589999997 7789999999999996 8999999853 33222 2211 111222333333455567789999
Q ss_pred EECC
Q 021928 167 ICPS 170 (305)
Q Consensus 167 i~~~ 170 (305)
|+++
T Consensus 201 INaT 204 (288)
T PRK12749 201 TNGT 204 (288)
T ss_pred EECC
Confidence 9883
|
|
| >PRK13403 ketol-acid reductoisomerase; Provisional | Back alignment and domain information |
|---|
Probab=95.23 E-value=0.078 Score=49.27 Aligned_cols=66 Identities=12% Similarity=0.000 Sum_probs=48.0
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEECCc
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE 171 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~ 171 (305)
.+++|.|.|- |.+|+++++.|...|++|++..|...........++++ .++.++++.+|+|+++.+
T Consensus 15 kgKtVGIIG~-GsIG~amA~nL~d~G~~ViV~~r~~~s~~~A~~~G~~v--------~sl~Eaak~ADVV~llLP 80 (335)
T PRK13403 15 QGKTVAVIGY-GSQGHAQAQNLRDSGVEVVVGVRPGKSFEVAKADGFEV--------MSVSEAVRTAQVVQMLLP 80 (335)
T ss_pred CcCEEEEEeE-cHHHHHHHHHHHHCcCEEEEEECcchhhHHHHHcCCEE--------CCHHHHHhcCCEEEEeCC
Confidence 4599999996 99999999999999999998877532221111122332 147788999999997633
|
|
| >cd08230 glucose_DH Glucose dehydrogenase | Back alignment and domain information |
|---|
Probab=95.22 E-value=0.17 Score=47.43 Aligned_cols=92 Identities=16% Similarity=0.035 Sum_probs=54.5
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcC---cchhhhhcCCCcEEeecCCCCH--HHHHHHhcCccEEEECCc
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKD---KRNAMESFGTYVESMAGDASNK--KFLKTALRGVRSIICPSE 171 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~---~~~~~~~~~~~v~~v~~D~~d~--~~~~~~~~~~d~Vi~~~~ 171 (305)
++.+|+|+|+ |.+|...++.+...|.+|++++|+ +++......-+++.+ |..+. .. .....++|+||.+.+
T Consensus 172 ~g~~vlI~G~-G~vG~~a~q~ak~~G~~vi~~~~~~~~~~~~~~~~~~Ga~~v--~~~~~~~~~-~~~~~~~d~vid~~g 247 (355)
T cd08230 172 NPRRALVLGA-GPIGLLAALLLRLRGFEVYVLNRRDPPDPKADIVEELGATYV--NSSKTPVAE-VKLVGEFDLIIEATG 247 (355)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEe--cCCccchhh-hhhcCCCCEEEECcC
Confidence 4689999986 999999998888899999999983 333221111223433 33221 11 122357899998854
Q ss_pred c--hHhhhhhhc-CCCEEEEEccc
Q 021928 172 G--FISNAGSLK-GVQHVILLSQL 192 (305)
Q Consensus 172 g--~~~~~a~~~-gv~~~V~iSS~ 192 (305)
. .+..+.+.. .-.+++.++..
T Consensus 248 ~~~~~~~~~~~l~~~G~~v~~G~~ 271 (355)
T cd08230 248 VPPLAFEALPALAPNGVVILFGVP 271 (355)
T ss_pred CHHHHHHHHHHccCCcEEEEEecC
Confidence 3 233332221 12367777654
|
Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai |
| >TIGR01161 purK phosphoribosylaminoimidazole carboxylase, PurK protein | Back alignment and domain information |
|---|
Probab=95.20 E-value=0.07 Score=50.13 Aligned_cols=66 Identities=12% Similarity=0.159 Sum_probs=52.6
Q ss_pred EEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEE
Q 021928 100 AVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIIC 168 (305)
Q Consensus 100 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~ 168 (305)
+|+|.|+ |.+|+.+++.+.+.|++|++++.++......+.+ +.+..|+.|.+.+.++.+.+|+|..
T Consensus 1 ~igiiG~-gql~~~l~~aa~~lG~~v~~~d~~~~~p~~~~ad--~~~~~~~~d~~~i~~~a~~~dvit~ 66 (352)
T TIGR01161 1 TVGILGG-GQLGRMLALAARPLGIKVHVLDPDANSPAVQVAD--HVVLAPFFDPAAIRELAESCDVITF 66 (352)
T ss_pred CEEEECC-CHHHHHHHHHHHHcCCEEEEECCCCCCChhHhCc--eeEeCCCCCHHHHHHHHhhCCEEEe
Confidence 4889998 8999999999999999999998876543322332 3457889999999999988887654
|
Phosphoribosylaminoimidazole carboxylase is a fusion protein in plants and fungi, but consists of two non-interacting proteins in bacteria, PurK and PurE. This model represents PurK, N5-carboxyaminoimidazole ribonucleotide synthetase, which hydrolyzes ATP and converts AIR to N5-CAIR. PurE converts N5-CAIR to CAIR. In the presence of high concentrations of bicarbonate, PurE is reported able to convert AIR to CAIR directly and without ATP. |
| >PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=95.17 E-value=0.088 Score=48.15 Aligned_cols=55 Identities=18% Similarity=0.180 Sum_probs=46.4
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEECC
Q 021928 95 PEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS 170 (305)
Q Consensus 95 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~ 170 (305)
+..+++|+|+|+++.+|+.++..|.++|.+|+.+.+.. ..+.+.++.+|+||.+.
T Consensus 155 ~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t---------------------~~l~~~~~~ADIVIsAv 209 (286)
T PRK14175 155 DLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRS---------------------KDMASYLKDADVIVSAV 209 (286)
T ss_pred CCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCc---------------------hhHHHHHhhCCEEEECC
Confidence 45679999999999999999999999999999887642 24667788999999883
|
|
| >cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=95.16 E-value=0.088 Score=48.63 Aligned_cols=64 Identities=11% Similarity=0.168 Sum_probs=45.6
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCC--CeEEEEEcCcchhhhhc----------CCCcEEeecCCCCHHHHHHHhcCccEE
Q 021928 99 DAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRNAMESF----------GTYVESMAGDASNKKFLKTALRGVRSI 166 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~~~g--~~V~~~~R~~~~~~~~~----------~~~v~~v~~D~~d~~~~~~~~~~~d~V 166 (305)
++|.|.|+ |.+|+.++..|+..| ++|++++|++++..... +..+.+.. .+. +.+.++|+|
T Consensus 1 ~kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~~---~~~----~~l~~aDIV 72 (306)
T cd05291 1 RKVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIKA---GDY----SDCKDADIV 72 (306)
T ss_pred CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEEc---CCH----HHhCCCCEE
Confidence 47999997 999999999999999 68999999887633211 11222222 222 346899999
Q ss_pred EECC
Q 021928 167 ICPS 170 (305)
Q Consensus 167 i~~~ 170 (305)
|+++
T Consensus 73 Iita 76 (306)
T cd05291 73 VITA 76 (306)
T ss_pred EEcc
Confidence 9883
|
L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine |
| >cd01486 Apg7 Apg7 is an E1-like protein, that activates two different ubiquitin-like proteins, Apg12 and Apg8, and assigns them to specific E2 enzymes, Apg10 and Apg3, respectively | Back alignment and domain information |
|---|
Probab=95.16 E-value=0.16 Score=46.69 Aligned_cols=83 Identities=12% Similarity=0.086 Sum_probs=52.4
Q ss_pred EEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcch-----------h----------------hhhcCCCcEE--eecC
Q 021928 100 AVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRN-----------A----------------MESFGTYVES--MAGD 149 (305)
Q Consensus 100 ~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~-----------~----------------~~~~~~~v~~--v~~D 149 (305)
+|+|.|+ |++|.++++.|+..|. ++++++.+.-. . ...+.+.+++ +...
T Consensus 1 kVLIvGa-GGLGs~vA~~La~aGVg~ItlvD~D~Ve~sNL~RQ~L~~~~D~~iGk~Ka~aaa~~L~~iNP~v~v~~~~~~ 79 (307)
T cd01486 1 KCLLLGA-GTLGCNVARNLLGWGVRHITFVDSGKVSYSNPVRQSLFTFEDCKGGKPKAEAAAERLKEIFPSIDATGIVLS 79 (307)
T ss_pred CEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCEeccccCCcccccccchhhcCccHHHHHHHHHHHHCCCcEEEEeeee
Confidence 5899998 8899999999999996 66665432100 0 0011233333 3322
Q ss_pred C----------------CCHHHHHHHhcCccEEEECCcch-----HhhhhhhcCC
Q 021928 150 A----------------SNKKFLKTALRGVRSIICPSEGF-----ISNAGSLKGV 183 (305)
Q Consensus 150 ~----------------~d~~~~~~~~~~~d~Vi~~~~g~-----~~~~a~~~gv 183 (305)
+ .+.+.+.++++++|+||.+.+.. +..++...+.
T Consensus 80 Ipmpgh~~~~~~~~~~~~~~~~l~~li~~~DvV~d~tDn~esR~L~~~~~~~~~k 134 (307)
T cd01486 80 IPMPGHPISESEVPSTLKDVKRLEELIKDHDVIFLLTDSRESRWLPTLLSAAKNK 134 (307)
T ss_pred ccccccccccccccccccCHHHHHHHHhhCCEEEECCCCHHHHHHHHHHHHHhCC
Confidence 2 25677889999999999886543 3445555554
|
This leads to the covalent conjugation of Apg8 with phosphatidylethanolamine, an important step in autophagy. Autophagy is a dynamic membrane phenomenon for bulk protein degradation in the lysosome/vacuole. |
| >TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent | Back alignment and domain information |
|---|
Probab=95.13 E-value=0.049 Score=50.57 Aligned_cols=69 Identities=20% Similarity=0.187 Sum_probs=45.2
Q ss_pred EEEEEcCCChHHHHHHHHHHhCCC--eEEEEEcCcch--hhhhcC--CCcEEeecCCCCHHHHHHHhcCccEEEECC
Q 021928 100 AVLVTDGDSDIGQMVILSLIVKRT--RIKALVKDKRN--AMESFG--TYVESMAGDASNKKFLKTALRGVRSIICPS 170 (305)
Q Consensus 100 ~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~R~~~~--~~~~~~--~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~ 170 (305)
+|.|+||+|.||+.++..|+..+. +++++++++.. ..+... ....+.... +.+++.+.++++|+||.++
T Consensus 1 KV~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~a~g~a~DL~~~~~~~~i~~~~--~~~~~~~~~~daDivvita 75 (312)
T TIGR01772 1 KVAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAGAAGVAADLSHIPTAASVKGFS--GEEGLENALKGADVVVIPA 75 (312)
T ss_pred CEEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCCCcEEEchhhcCCcCceEEEec--CCCchHHHcCCCCEEEEeC
Confidence 589999999999999999998885 78888877622 111111 111222101 1123567899999999873
|
Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases. |
| >PRK14852 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=95.08 E-value=0.19 Score=53.05 Aligned_cols=93 Identities=14% Similarity=0.114 Sum_probs=61.8
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcch-------------------------hhhhcCC--CcEEee
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRN-------------------------AMESFGT--YVESMA 147 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~-------------------------~~~~~~~--~v~~v~ 147 (305)
....+|+|.|+ |++|+.+++.|+..|. ++++++.+.-. ....+.+ +++.+.
T Consensus 330 L~~srVlVvGl-GGlGs~ia~~LAraGVG~I~L~D~D~Ve~SNLNRQ~l~~~~dIG~~Kaevaa~~l~~INP~v~I~~~~ 408 (989)
T PRK14852 330 LLRSRVAIAGL-GGVGGIHLMTLARTGIGNFNLADFDAYSPVNLNRQYGASIASFGRGKLDVMTERALSVNPFLDIRSFP 408 (989)
T ss_pred HhcCcEEEECC-cHHHHHHHHHHHHcCCCeEEEEcCCEecccccccccCCChhhCCChHHHHHHHHHHHHCCCCeEEEEe
Confidence 34589999997 8899999999999996 66666443211 0011233 344454
Q ss_pred cCCCCHHHHHHHhcCccEEEECCcc-------hHhhhhhhcCCCEEEEEcc
Q 021928 148 GDASNKKFLKTALRGVRSIICPSEG-------FISNAGSLKGVQHVILLSQ 191 (305)
Q Consensus 148 ~D~~d~~~~~~~~~~~d~Vi~~~~g-------~~~~~a~~~gv~~~V~iSS 191 (305)
..+ +.+.+.+.++++|+||.+... .+.+.|.+.+++ +|..++
T Consensus 409 ~~I-~~en~~~fl~~~DiVVDa~D~~~~~~rr~l~~~c~~~~IP-~I~ag~ 457 (989)
T PRK14852 409 EGV-AAETIDAFLKDVDLLVDGIDFFALDIRRRLFNRALELGIP-VITAGP 457 (989)
T ss_pred cCC-CHHHHHHHhhCCCEEEECCCCccHHHHHHHHHHHHHcCCC-EEEeec
Confidence 555 457788899999999987443 245567777775 444444
|
|
| >PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=95.04 E-value=0.064 Score=49.46 Aligned_cols=37 Identities=5% Similarity=0.028 Sum_probs=33.2
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchh
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA 135 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~ 135 (305)
.++|.|.|+ |.+|..++..|++.|++|+++.++++..
T Consensus 4 ~~~I~vIGa-G~mG~~iA~~l~~~g~~V~~~d~~~~~~ 40 (311)
T PRK06130 4 IQNLAIIGA-GTMGSGIAALFARKGLQVVLIDVMEGAL 40 (311)
T ss_pred ccEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHH
Confidence 478999997 9999999999999999999999987653
|
|
| >TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase | Back alignment and domain information |
|---|
Probab=95.04 E-value=0.031 Score=53.76 Aligned_cols=70 Identities=14% Similarity=0.026 Sum_probs=47.1
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEe-------------ecCCCCHHHHHHHhcCccE
Q 021928 99 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESM-------------AGDASNKKFLKTALRGVRS 165 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v-------------~~D~~d~~~~~~~~~~~d~ 165 (305)
|+|.|.|. |.+|..++..|++.|++|+++.+++++..........+. .+.+.-..+..++++++|+
T Consensus 1 mkI~vIGl-G~~G~~lA~~La~~G~~V~~~d~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~g~l~~~~~~~~~~~~adv 79 (411)
T TIGR03026 1 MKIAVIGL-GYVGLPLAALLADLGHEVTGVDIDQEKVDKLNKGKSPIYEPGLDELLAKALAAGRLRATTDYEDAIRDADV 79 (411)
T ss_pred CEEEEECC-CchhHHHHHHHHhcCCeEEEEECCHHHHHHhhcCCCCCCCCCHHHHHHHhhhcCCeEEECCHHHHHhhCCE
Confidence 47999986 999999999999999999999998876543221110000 0101111234566788999
Q ss_pred EEEC
Q 021928 166 IICP 169 (305)
Q Consensus 166 Vi~~ 169 (305)
||.+
T Consensus 80 vii~ 83 (411)
T TIGR03026 80 IIIC 83 (411)
T ss_pred EEEE
Confidence 9977
|
All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively. |
| >PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=95.04 E-value=0.064 Score=49.36 Aligned_cols=55 Identities=9% Similarity=0.063 Sum_probs=44.9
Q ss_pred CcCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEEC
Q 021928 94 FPEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 169 (305)
Q Consensus 94 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~ 169 (305)
.+..+|+|.|.|.+|.+|+.++..|+++|++|.+..|... ++.++.+.+|+||.+
T Consensus 155 i~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~---------------------~l~e~~~~ADIVIsa 209 (301)
T PRK14194 155 GDLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRST---------------------DAKALCRQADIVVAA 209 (301)
T ss_pred CCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCC---------------------CHHHHHhcCCEEEEe
Confidence 3456799999999999999999999999999999866542 355666777888866
|
|
| >COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.04 E-value=0.056 Score=49.39 Aligned_cols=68 Identities=19% Similarity=0.226 Sum_probs=46.8
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCC-CeEEEEEcCcchhhhh---cCCCc-EEeecCCCCHHHHHHHhcCccEEEEC
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAMES---FGTYV-ESMAGDASNKKFLKTALRGVRSIICP 169 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~R~~~~~~~~---~~~~v-~~v~~D~~d~~~~~~~~~~~d~Vi~~ 169 (305)
..++++|.|| |+.+++++.+|++.| .+|+++.|+.+++.++ ++... .....++.+.+... ..|.+|++
T Consensus 125 ~~~~vlilGA-GGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~~~~~~~~~~~~~~~----~~dliINa 197 (283)
T COG0169 125 TGKRVLILGA-GGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGAAVEAAALADLEGLE----EADLLINA 197 (283)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccccccccccccccccc----ccCEEEEC
Confidence 4689999998 889999999999999 4899999998875543 33211 11112222222111 67999988
|
|
| >PRK09599 6-phosphogluconate dehydrogenase-like protein; Reviewed | Back alignment and domain information |
|---|
Probab=95.03 E-value=0.089 Score=48.41 Aligned_cols=66 Identities=9% Similarity=-0.022 Sum_probs=44.4
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEEC
Q 021928 99 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 169 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~ 169 (305)
|+|.|.|. |.+|+.+++.|++.|++|.+..|++++..+....++.+ ..+.+.+.+.+...|+|+.+
T Consensus 1 m~Ig~IGl-G~MG~~mA~~L~~~g~~v~v~dr~~~~~~~~~~~g~~~----~~~~~e~~~~~~~~dvvi~~ 66 (301)
T PRK09599 1 MQLGMIGL-GRMGGNMARRLLRGGHEVVGYDRNPEAVEALAEEGATG----ADSLEELVAKLPAPRVVWLM 66 (301)
T ss_pred CEEEEEcc-cHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHCCCee----cCCHHHHHhhcCCCCEEEEE
Confidence 47999985 99999999999999999999999987654332222221 12333333333345777755
|
|
| >PRK06223 malate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=94.98 E-value=0.048 Score=50.25 Aligned_cols=37 Identities=11% Similarity=0.155 Sum_probs=32.6
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcchh
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNA 135 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~ 135 (305)
+++|.|.|| |.+|..++..++..|. +|++++++++..
T Consensus 2 ~~KI~VIGa-G~vG~~ia~~la~~~~~ev~L~D~~~~~~ 39 (307)
T PRK06223 2 RKKISIIGA-GNVGATLAHLLALKELGDVVLFDIVEGVP 39 (307)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEEECCCchh
Confidence 489999999 9999999999998875 899999977653
|
|
| >PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional | Back alignment and domain information |
|---|
Probab=94.97 E-value=0.084 Score=48.99 Aligned_cols=65 Identities=15% Similarity=0.123 Sum_probs=49.6
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEECCc
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE 171 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~ 171 (305)
.+++|.|.|- |.||+.+++.|...|++|++..|...... .+..+ ...+++.++++++|+|+++.+
T Consensus 135 ~g~tvgIvG~-G~IG~~vA~~l~afG~~V~~~~~~~~~~~-----~~~~~----~~~~~l~e~l~~aDvvv~~lP 199 (312)
T PRK15469 135 EDFTIGILGA-GVLGSKVAQSLQTWGFPLRCWSRSRKSWP-----GVQSF----AGREELSAFLSQTRVLINLLP 199 (312)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCCCC-----Cceee----cccccHHHHHhcCCEEEECCC
Confidence 4689999996 99999999999999999999988653321 12211 134578899999999997733
|
|
| >PRK12480 D-lactate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.95 E-value=0.068 Score=50.02 Aligned_cols=63 Identities=14% Similarity=0.065 Sum_probs=48.2
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEECCc
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE 171 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~ 171 (305)
.+++|.|.|. |.||+.+++.|...|++|++.+|++...... ++ -..++.++++.+|+|+.+.+
T Consensus 145 ~g~~VgIIG~-G~IG~~vA~~L~~~G~~V~~~d~~~~~~~~~----~~-------~~~~l~ell~~aDiVil~lP 207 (330)
T PRK12480 145 KNMTVAIIGT-GRIGAATAKIYAGFGATITAYDAYPNKDLDF----LT-------YKDSVKEAIKDADIISLHVP 207 (330)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCChhHhhhh----hh-------ccCCHHHHHhcCCEEEEeCC
Confidence 4589999996 9999999999999999999999886432210 11 11346788999999997633
|
|
| >cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members | Back alignment and domain information |
|---|
Probab=94.91 E-value=0.24 Score=45.38 Aligned_cols=98 Identities=14% Similarity=0.129 Sum_probs=59.1
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcE-EeecCCCCH-HHHHHHh-cCccEEEECCcch
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVE-SMAGDASNK-KFLKTAL-RGVRSIICPSEGF 173 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~-~v~~D~~d~-~~~~~~~-~~~d~Vi~~~~g~ 173 (305)
++.+|+|.||+|.+|..+++.+...|.+|+++++++++......-++. ++..+-.+. +.+.... +++|.|+.+.++.
T Consensus 139 ~~~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~vd~v~~~~g~~ 218 (329)
T cd08250 139 SGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAEFLKSLGCDRPINYKTEDLGEVLKKEYPKGVDVVYESVGGE 218 (329)
T ss_pred CCCEEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcHHHHHHHHHcCCceEEeCCCccHHHHHHHhcCCCCeEEEECCcHH
Confidence 468999999999999999998889999999999887653322111122 222211111 2222222 4689999875543
Q ss_pred H-hhhhhh-cCCCEEEEEccccc
Q 021928 174 I-SNAGSL-KGVQHVILLSQLSV 194 (305)
Q Consensus 174 ~-~~~a~~-~gv~~~V~iSS~~~ 194 (305)
. ..+.+. ..-.++|.+++...
T Consensus 219 ~~~~~~~~l~~~g~~v~~g~~~~ 241 (329)
T cd08250 219 MFDTCVDNLALKGRLIVIGFISG 241 (329)
T ss_pred HHHHHHHHhccCCeEEEEecccC
Confidence 2 222222 23447888876543
|
Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. |
| >PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional | Back alignment and domain information |
|---|
Probab=94.89 E-value=0.13 Score=50.78 Aligned_cols=51 Identities=16% Similarity=-0.019 Sum_probs=39.7
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeec
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAG 148 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~ 148 (305)
++.+|+|+|+ |-+|...+..+...|.+|+++++++++......-+.+++..
T Consensus 164 pg~kVlViGa-G~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~aeslGA~~v~i 214 (509)
T PRK09424 164 PPAKVLVIGA-GVAGLAAIGAAGSLGAIVRAFDTRPEVAEQVESMGAEFLEL 214 (509)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEEe
Confidence 5789999998 99999999999999999999999987754332223454433
|
|
| >PLN02688 pyrroline-5-carboxylate reductase | Back alignment and domain information |
|---|
Probab=94.89 E-value=0.067 Score=48.11 Aligned_cols=63 Identities=11% Similarity=0.026 Sum_probs=43.8
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCC----eEEEE-EcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEEC
Q 021928 99 DAVLVTDGDSDIGQMVILSLIVKRT----RIKAL-VKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 169 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~~~g~----~V~~~-~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~ 169 (305)
|+|.+.| .|.+|..+++.|++.|+ +|++. .|++++.......++... .+..++++++|+||.+
T Consensus 1 ~kI~~IG-~G~mG~a~a~~L~~~g~~~~~~i~v~~~r~~~~~~~~~~~g~~~~-------~~~~e~~~~aDvVil~ 68 (266)
T PLN02688 1 FRVGFIG-AGKMAEAIARGLVASGVVPPSRISTADDSNPARRDVFQSLGVKTA-------ASNTEVVKSSDVIILA 68 (266)
T ss_pred CeEEEEC-CcHHHHHHHHHHHHCCCCCcceEEEEeCCCHHHHHHHHHcCCEEe-------CChHHHHhcCCEEEEE
Confidence 5799998 59999999999999998 88888 777766433322233221 1223456678888866
|
|
| >PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1 | Back alignment and domain information |
|---|
Probab=94.89 E-value=0.059 Score=43.94 Aligned_cols=65 Identities=9% Similarity=0.019 Sum_probs=43.0
Q ss_pred EEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEE----------eecCCCCHHHHHHHhcCccEEEECC
Q 021928 101 VLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVES----------MAGDASNKKFLKTALRGVRSIICPS 170 (305)
Q Consensus 101 vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~----------v~~D~~d~~~~~~~~~~~d~Vi~~~ 170 (305)
|+|.|+ |.||..++.+|.+.|++|.++.|.+ ........++.+ ......+. ....+.+|.||.+.
T Consensus 1 I~I~G~-GaiG~~~a~~L~~~g~~V~l~~r~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~---~~~~~~~D~viv~v 75 (151)
T PF02558_consen 1 ILIIGA-GAIGSLYAARLAQAGHDVTLVSRSP-RLEAIKEQGLTITGPDGDETVQPPIVISAP---SADAGPYDLVIVAV 75 (151)
T ss_dssp EEEEST-SHHHHHHHHHHHHTTCEEEEEESHH-HHHHHHHHCEEEEETTEEEEEEEEEEESSH---GHHHSTESEEEE-S
T ss_pred CEEECc-CHHHHHHHHHHHHCCCceEEEEccc-cHHhhhheeEEEEecccceecccccccCcc---hhccCCCcEEEEEe
Confidence 689997 9999999999999999999999988 322211111111 11222222 34567889999883
|
1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B .... |
| >PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=94.88 E-value=0.02 Score=52.31 Aligned_cols=36 Identities=8% Similarity=0.083 Sum_probs=32.8
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcch
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN 134 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~ 134 (305)
.++|.|.|+ |.+|..++..|+..|++|+++.++++.
T Consensus 3 ~~kIaViGa-G~mG~~iA~~la~~G~~V~l~d~~~~~ 38 (287)
T PRK08293 3 IKNVTVAGA-GVLGSQIAFQTAFHGFDVTIYDISDEA 38 (287)
T ss_pred ccEEEEECC-CHHHHHHHHHHHhcCCeEEEEeCCHHH
Confidence 378999997 999999999999999999999998765
|
|
| >COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=94.87 E-value=0.25 Score=43.87 Aligned_cols=95 Identities=16% Similarity=0.134 Sum_probs=63.1
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcc-------hh---------------h---hhcCCCcEEeec-CC
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKR-------NA---------------M---ESFGTYVESMAG-DA 150 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~-------~~---------------~---~~~~~~v~~v~~-D~ 150 (305)
..+|+|.|. |++|+..++.|+..|. ++.+++-+.- +. . ..+.+..++... |+
T Consensus 30 ~~~V~VvGi-GGVGSw~veALaRsGig~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~~InP~c~V~~~~~f 108 (263)
T COG1179 30 QAHVCVVGI-GGVGSWAVEALARSGIGRITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIKQINPECEVTAINDF 108 (263)
T ss_pred hCcEEEEec-CchhHHHHHHHHHcCCCeEEEEecccccccccchhhHhhhhhcccHHHHHHHHHHHhhCCCceEeehHhh
Confidence 479999998 8899999999999996 6776654321 10 0 112344444443 34
Q ss_pred CCHHHHHHHhc-CccEEEECCcc-----hHhhhhhhcCCCEEEEEccccccc
Q 021928 151 SNKKFLKTALR-GVRSIICPSEG-----FISNAGSLKGVQHVILLSQLSVYR 196 (305)
Q Consensus 151 ~d~~~~~~~~~-~~d~Vi~~~~g-----~~~~~a~~~gv~~~V~iSS~~~~~ 196 (305)
-+.+.+...+. +.|.||-+... .+...|++.+++ ++||+++.+
T Consensus 109 ~t~en~~~~~~~~~DyvIDaiD~v~~Kv~Li~~c~~~ki~---vIss~Gag~ 157 (263)
T COG1179 109 ITEENLEDLLSKGFDYVIDAIDSVRAKVALIAYCRRNKIP---VISSMGAGG 157 (263)
T ss_pred hCHhHHHHHhcCCCCEEEEchhhhHHHHHHHHHHHHcCCC---EEeeccccC
Confidence 46777777665 58999988443 255567777763 567777654
|
|
| >PLN00112 malate dehydrogenase (NADP); Provisional | Back alignment and domain information |
|---|
Probab=94.86 E-value=0.08 Score=51.40 Aligned_cols=69 Identities=9% Similarity=-0.033 Sum_probs=48.4
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhC-------CC--eEEEEEcCcchhhhh----c----C--CCcEEeecCCCCHHH
Q 021928 95 PEARDAVLVTDGDSDIGQMVILSLIVK-------RT--RIKALVKDKRNAMES----F----G--TYVESMAGDASNKKF 155 (305)
Q Consensus 95 ~~~~~~vlVtGatG~iG~~l~~~L~~~-------g~--~V~~~~R~~~~~~~~----~----~--~~v~~v~~D~~d~~~ 155 (305)
..++-+|.|+||+|.||.+++..|+.. +. ++++++++++++... . + .++.+.. .+
T Consensus 97 ~~~~~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~~v~i~~---~~--- 170 (444)
T PLN00112 97 WKKLINVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLREVSIGI---DP--- 170 (444)
T ss_pred CCCCeEEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcCceEEec---CC---
Confidence 344689999999999999999999988 64 788888887763211 1 1 1222111 22
Q ss_pred HHHHhcCccEEEECC
Q 021928 156 LKTALRGVRSIICPS 170 (305)
Q Consensus 156 ~~~~~~~~d~Vi~~~ 170 (305)
.+.++++|+||.++
T Consensus 171 -ye~~kdaDiVVitA 184 (444)
T PLN00112 171 -YEVFQDAEWALLIG 184 (444)
T ss_pred -HHHhCcCCEEEECC
Confidence 35689999999883
|
|
| >TIGR02717 AcCoA-syn-alpha acetyl coenzyme A synthetase (ADP forming), alpha domain | Back alignment and domain information |
|---|
Probab=94.81 E-value=1.2 Score=43.56 Aligned_cols=85 Identities=13% Similarity=0.153 Sum_probs=56.6
Q ss_pred CCCEEEEEcCC---ChHHHHHHHHHHhCCC--eEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEECCc
Q 021928 97 ARDAVLVTDGD---SDIGQMVILSLIVKRT--RIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE 171 (305)
Q Consensus 97 ~~~~vlVtGat---G~iG~~l~~~L~~~g~--~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~ 171 (305)
.+++|.|.|++ |.+|..+.+.|.+.|| +|+.+....... .+ +.-..++.++-+.+|.++.+.+
T Consensus 6 ~p~siavvGaS~~~~~~g~~~~~~l~~~gf~g~v~~Vnp~~~~i---~G---------~~~~~sl~~lp~~~Dlavi~vp 73 (447)
T TIGR02717 6 NPKSVAVIGASRDPGKVGYAIMKNLIEGGYKGKIYPVNPKAGEI---LG---------VKAYPSVLEIPDPVDLAVIVVP 73 (447)
T ss_pred CCCEEEEEccCCCCCchHHHHHHHHHhCCCCCcEEEECCCCCcc---CC---------ccccCCHHHCCCCCCEEEEecC
Confidence 45899999998 6799999999999998 677665543211 11 1112334444456898887633
Q ss_pred -ch---HhhhhhhcCCCEEEEEcccc
Q 021928 172 -GF---ISNAGSLKGVQHVILLSQLS 193 (305)
Q Consensus 172 -g~---~~~~a~~~gv~~~V~iSS~~ 193 (305)
.. ..+.+.+.|++.+|.+|+-.
T Consensus 74 ~~~~~~~l~e~~~~gv~~~vi~s~gf 99 (447)
T TIGR02717 74 AKYVPQVVEECGEKGVKGAVVITAGF 99 (447)
T ss_pred HHHHHHHHHHHHhcCCCEEEEECCCc
Confidence 22 34445668999999887643
|
Although technically reversible, it is believed that this group of ADP-dependent acetyl-CoA synthetases (ACS) act in the direction of acetate and ATP production in the organisms in which it has been characterized. In most species this protein exists as a fused alpha-beta domain polypeptide. In Pyrococcus and related species, however the domains exist as separate polypeptides. This model represents the alpha (N-terminal) domain. In Pyrococcus and related species there appears to have been the development of a paralogous family such that four other proteins are close relatives. In reference, one of these (along with its beta-domain partner) was characterized as ACS-II showing specificity for phenylacetyl-CoA. This model has been constructed to exclude these non-ACS-I paralogs. This may result in new, authentic ACS-I sequences falling below the trusted cutoff. |
| >cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2 | Back alignment and domain information |
|---|
Probab=94.80 E-value=0.34 Score=44.18 Aligned_cols=95 Identities=9% Similarity=0.124 Sum_probs=59.5
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCC---HHHHHHHhc--CccEEEECCc
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASN---KKFLKTALR--GVRSIICPSE 171 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d---~~~~~~~~~--~~d~Vi~~~~ 171 (305)
++.+|+|.||+|.+|..+++.+...|.+|+.++++.++.......+++.+. +..+ .+.+.+... ++|.|+.+.+
T Consensus 139 ~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~i~~~~~~~~~d~v~d~~g 217 (324)
T cd08292 139 PGQWLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAGVAELRALGIGPVV-STEQPGWQDKVREAAGGAPISVALDSVG 217 (324)
T ss_pred CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecCHHHHHHHHhcCCCEEE-cCCCchHHHHHHHHhCCCCCcEEEECCC
Confidence 468999999999999999999999999999998887653322111232221 2222 233444444 6899997744
Q ss_pred ch-Hhhhhhh-cCCCEEEEEccc
Q 021928 172 GF-ISNAGSL-KGVQHVILLSQL 192 (305)
Q Consensus 172 g~-~~~~a~~-~gv~~~V~iSS~ 192 (305)
+. ..+..+. ..-.+||.++..
T Consensus 218 ~~~~~~~~~~l~~~g~~v~~g~~ 240 (324)
T cd08292 218 GKLAGELLSLLGEGGTLVSFGSM 240 (324)
T ss_pred ChhHHHHHHhhcCCcEEEEEecC
Confidence 33 2222222 223578877643
|
2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina |
| >cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR) | Back alignment and domain information |
|---|
Probab=94.79 E-value=0.37 Score=43.61 Aligned_cols=96 Identities=14% Similarity=0.095 Sum_probs=59.6
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCC-HHHHHHHhcCccEEEECCcchH-
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASN-KKFLKTALRGVRSIICPSEGFI- 174 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d-~~~~~~~~~~~d~Vi~~~~g~~- 174 (305)
++.+|+|.|++|.+|..+++.+...|.+|+++++++++......-++..+..+-.+ .+.+.+.=+++|.++.+.++..
T Consensus 142 ~g~~vlV~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~d~vl~~~~~~~~ 221 (320)
T cd08243 142 PGDTLLIRGGTSSVGLAALKLAKALGATVTATTRSPERAALLKELGADEVVIDDGAIAEQLRAAPGGFDKVLELVGTATL 221 (320)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEEecCccHHHHHHHhCCCceEEEECCChHHH
Confidence 46899999999999999999999999999999988766432221223333222111 2334333246899998754432
Q ss_pred hhhhhh-cCCCEEEEEccc
Q 021928 175 SNAGSL-KGVQHVILLSQL 192 (305)
Q Consensus 175 ~~~a~~-~gv~~~V~iSS~ 192 (305)
.+..+. ..-.+|+.++..
T Consensus 222 ~~~~~~l~~~g~~v~~g~~ 240 (320)
T cd08243 222 KDSLRHLRPGGIVCMTGLL 240 (320)
T ss_pred HHHHHHhccCCEEEEEccC
Confidence 222222 123477777654
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. |
| >cd05288 PGDH Prostaglandin dehydrogenases | Back alignment and domain information |
|---|
Probab=94.79 E-value=0.31 Score=44.58 Aligned_cols=94 Identities=17% Similarity=0.186 Sum_probs=58.0
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh---cCCCcEEeecCCCCH---HHHHHHh-cCccEEEEC
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGDASNK---KFLKTAL-RGVRSIICP 169 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~~~~v~~v~~D~~d~---~~~~~~~-~~~d~Vi~~ 169 (305)
+..+|+|.|++|.+|..+++.+.+.|.+|+.+++++++.... ++. -.++ |..+. +.+.... .++|+++.+
T Consensus 145 ~~~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~~g~-~~~~--~~~~~~~~~~v~~~~~~~~d~vi~~ 221 (329)
T cd05288 145 PGETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWLVEELGF-DAAI--NYKTPDLAEALKEAAPDGIDVYFDN 221 (329)
T ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhhcCC-ceEE--ecCChhHHHHHHHhccCCceEEEEc
Confidence 458999999999999999999999999999998887653322 221 1222 22222 2223222 468999987
Q ss_pred CcchH-hhhhhh-cCCCEEEEEcccc
Q 021928 170 SEGFI-SNAGSL-KGVQHVILLSQLS 193 (305)
Q Consensus 170 ~~g~~-~~~a~~-~gv~~~V~iSS~~ 193 (305)
.++.. ..+.+. ..-.++|.++...
T Consensus 222 ~g~~~~~~~~~~l~~~G~~v~~g~~~ 247 (329)
T cd05288 222 VGGEILDAALTLLNKGGRIALCGAIS 247 (329)
T ss_pred chHHHHHHHHHhcCCCceEEEEeecc
Confidence 55432 222221 1224687776543
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino |
| >COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=94.77 E-value=0.22 Score=46.15 Aligned_cols=65 Identities=15% Similarity=0.302 Sum_probs=44.1
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCC--eEEEEEcCcchhh----hhc------CCCcEEeecCCCCHHHHHHHhcCccEE
Q 021928 99 DAVLVTDGDSDIGQMVILSLIVKRT--RIKALVKDKRNAM----ESF------GTYVESMAGDASNKKFLKTALRGVRSI 166 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~R~~~~~~----~~~------~~~v~~v~~D~~d~~~~~~~~~~~d~V 166 (305)
++|.|+|| |+||+.++..|+.++. ++++++..++.+. +.. ... ..+.+| .+ .+.++++|+|
T Consensus 1 ~KVaviGa-G~VG~s~a~~l~~~~~~~el~LiDi~~~~~~G~a~DL~~~~~~~~~~-~~i~~~-~~----y~~~~~aDiV 73 (313)
T COG0039 1 MKVAVIGA-GNVGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDLSHAAAPLGSD-VKITGD-GD----YEDLKGADIV 73 (313)
T ss_pred CeEEEECC-ChHHHHHHHHHhcccccceEEEEEcccccccchhcchhhcchhccCc-eEEecC-CC----hhhhcCCCEE
Confidence 58999999 9999999999988773 7888888854421 111 011 122222 22 4568899999
Q ss_pred EECC
Q 021928 167 ICPS 170 (305)
Q Consensus 167 i~~~ 170 (305)
+.++
T Consensus 74 vitA 77 (313)
T COG0039 74 VITA 77 (313)
T ss_pred EEeC
Confidence 9774
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 305 | ||||
| 1xq6_A | 253 | X-ray Structure Of Gene Product From Arabidopsis Th | 1e-04 |
| >pdb|1XQ6|A Chain A, X-ray Structure Of Gene Product From Arabidopsis Thaliana At5g02240 Length = 253 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* Length = 253 | Back alignment and structure |
|---|
Score = 78.7 bits (194), Expect = 2e-17
Identities = 54/253 (21%), Positives = 92/253 (36%), Gaps = 55/253 (21%)
Query: 101 VLVTDGDSDIGQMVILSLI--VKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKT 158
VLVT GQ+V L + K LV+ + E G + GD ++ +
Sbjct: 7 VLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGK-EKIGGEADVFIGDITDADSINP 65
Query: 159 ALRGVRSIIC-------PSEGFISNAGSLK----------------------------GV 183
A +G+ +++ GF G GV
Sbjct: 66 AFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGV 125
Query: 184 QHVILLSQLSVYRGSGGIQALMKGN---ARKLAEQDESMLMASGIPYTIIRTGVLQNTPG 240
+H++++ + + L GN ++ AEQ L SG PYTIIR G L + G
Sbjct: 126 KHIVVVGSMGGTNPDHPLNKLGNGNILVWKRKAEQ---YLADSGTPYTIIRAGGLLDKEG 182
Query: 241 GKQGFQFEEG----CAANGSLSKEDAAFICVEALESIPQTGLIFEVVNGEE----KVSDW 292
G + + ++ + D A +C++AL F++ + E D+
Sbjct: 183 GVRELLVGKDDELLQTDTKTVPRADVAEVCIQALLFEEAKNKAFDLGSKPEGTSTPTKDF 242
Query: 293 KKCFSRLMEKTGK 305
K FS++ T +
Sbjct: 243 KALFSQV---TSR 252
|
| >3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} Length = 236 | Back alignment and structure |
|---|
Score = 72.4 bits (178), Expect = 3e-15
Identities = 38/211 (18%), Positives = 76/211 (36%), Gaps = 25/211 (11%)
Query: 101 VLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTAL 160
VLV + + + ++ L K A+V+++ E + + A
Sbjct: 24 VLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRERGASDIVVANLEED-FSHAF 82
Query: 161 RGVRSIIC-----PSEGFIS-------------NAGSLKGVQHVILLSQLSVYRGSGGIQ 202
+ +++ P G +G++ I++S + G
Sbjct: 83 ASIDAVVFAAGSGPHTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSSVGTVDPDQGPM 142
Query: 203 ALMK-GNARKLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKED 261
+ A++LA+ L S + YTI+R G L N + S+++ D
Sbjct: 143 NMRHYLVAKRLADD---ELKRSSLDYTIVRPGPLSNEESTGKVTVSPHFSEITRSITRHD 199
Query: 262 AAFICVEALESIPQT-GLIFEVVNGEEKVSD 291
A + E ++ T G FEV+NG+ ++
Sbjct: 200 VAKVIAELVDQ-QHTIGKTFEVLNGDTPIAK 229
|
| >3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} Length = 236 | Back alignment and structure |
|---|
Score = 71.8 bits (176), Expect = 7e-15
Identities = 32/185 (17%), Positives = 61/185 (32%), Gaps = 13/185 (7%)
Query: 101 VLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA 159
VL+ I + VI L K+ + + + + T + + GD N LK A
Sbjct: 26 VLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPYPTNSQIIMGDVLNHAALKQA 85
Query: 160 LRGVRSIICPSEGF--------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK 211
++G + G + A V+ +I + L +Y G
Sbjct: 86 MQGQDIVYANLTGEDLDIQANSVIAAMKACDVKRLIFVLSLGIYDEVPGKFVEWNNAVIG 145
Query: 212 LAEQD----ESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICV 267
+ + ASG+ YTI+R L + +S++ A +
Sbjct: 146 EPLKPFRRAADAIEASGLEYTILRPAWLTDEDIIDYELTSRNEPFKGTIVSRKSVAALIT 205
Query: 268 EALES 272
+ ++
Sbjct: 206 DIIDK 210
|
| >1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* Length = 206 | Back alignment and structure |
|---|
Score = 69.6 bits (171), Expect = 2e-14
Identities = 22/179 (12%), Positives = 50/179 (27%), Gaps = 18/179 (10%)
Query: 110 IGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 169
G + + + LV+D + GD + + G ++I
Sbjct: 15 TGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAADVDKTVAGQDAVIV- 73
Query: 170 SEGFISNAGSLK----------------GVQHVILLSQLSVYRGSGGIQALMKGNARKLA 213
G ++ GV V+ + + + ++
Sbjct: 74 LLGTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTKVPPRLQAVTDDHI 133
Query: 214 EQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALES 272
+ +L SG+ Y + + + P +G + +SK D + L +
Sbjct: 134 RMHK-VLRESGLKYVAVMPPHIGDQPLTGAYTVTLDGRGPSRVISKHDLGHFMLRCLTT 191
|
| >3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 3r14_A* Length = 221 | Back alignment and structure |
|---|
Score = 63.9 bits (155), Expect = 3e-12
Identities = 32/209 (15%), Positives = 66/209 (31%), Gaps = 16/209 (7%)
Query: 101 VLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAMESFGT---YVESMAGDASNKKFL 156
+ + I Q + +L+ I + + + V + G N L
Sbjct: 8 ITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEIIDHERVTVIEGSFQNPGXL 67
Query: 157 KTALRGVRSIICPSEGFISNAGSL------KGVQHVILLSQLSVY-RGSGGIQALMKGNA 209
+ A+ + + S+ S+ ++ VI +S + ++ N
Sbjct: 68 EQAVTNAEVVFVGAMESGSDMASIVKALSRXNIRRVIGVSMAGLSGEFPVALEKWTFDNL 127
Query: 210 RKLAEQD----ESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCA-ANGSLSKEDAAF 264
Q ++L S + YTI+R L N P EG + +S+E
Sbjct: 128 PISYVQGERQARNVLRESNLNYTILRLTWLYNDPEXTDYELIPEGAQFNDAQVSREAVVK 187
Query: 265 ICVEALESIPQTGLIFEVVNGEEKVSDWK 293
+ L + +T + E + +
Sbjct: 188 AIFDILHAADETPFHRTSIGVGEPGTHYD 216
|
| >3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} Length = 219 | Back alignment and structure |
|---|
Score = 60.8 bits (148), Expect = 3e-11
Identities = 34/211 (16%), Positives = 70/211 (33%), Gaps = 27/211 (12%)
Query: 101 VLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDAS-NKKFLKTA 159
+ + +G+ ++ SL +I A + + V+++ D + +
Sbjct: 3 IFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQYNN--VKAVHFDVDWTPEEMAKQ 60
Query: 160 LRGVRSIIC----PSEGFIS----------NAGSLKGVQHVILLSQLSVYRGSGGIQALM 205
L G+ +II + + A V+ ILLS + + I A
Sbjct: 61 LHGMDAIINVSGSGGKSLLKVDLYGAVKLMQAAEKAEVKRFILLSTIFSLQPEKWIGAGF 120
Query: 206 KGNARKL---AEQDESMLMASGIPYTIIRTGVLQNTPG-GKQGFQFEEGCAANGSLSKED 261
D + + + YTII+ G L G + + S + D
Sbjct: 121 DALKDYYIAKHFADLYLTKETNLDYTIIQPGALTEEEATGL----IDINDEVSASNTIGD 176
Query: 262 AAFICVEALESIPQT-GLIFEVVNGEEKVSD 291
A E + + + G + + NG+ + +
Sbjct: 177 VADTIKELVMT-DHSIGKVISMHNGKTAIKE 206
|
| >3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} Length = 289 | Back alignment and structure |
|---|
Score = 56.9 bits (138), Expect = 1e-09
Identities = 24/155 (15%), Positives = 49/155 (31%), Gaps = 23/155 (14%)
Query: 101 VLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA 159
+++T +G + I V++ + + V D N++ + A
Sbjct: 3 IMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDWRGKVSVRQLDYFNQESMVEA 62
Query: 160 LRGVRS--IICPSEG-----------FISNAGSLKGVQHVILLSQLSVYRGSGGIQALMK 206
+G+ + I + A GV H+I + + + +
Sbjct: 63 FKGMDTVVFIPSIIHPSFKRIPEVENLVYAAKQ-SGVAHIIFIGYYADQHNNPFHMSPYF 121
Query: 207 GNARKLAEQDESMLMASGIPYTIIRTGV-LQNTPG 240
G A +L SGI YT +R + +
Sbjct: 122 GYA-------SRLLSTSGIDYTYVRMAMYMDPLKP 149
|
| >2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* Length = 286 | Back alignment and structure |
|---|
Score = 53.1 bits (128), Expect = 3e-08
Identities = 38/154 (24%), Positives = 61/154 (39%), Gaps = 23/154 (14%)
Query: 101 VLVTDGDSDIGQMVILSLI--VKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKT 158
+ +T +G VI SL+ V ++I A+V++ A + D ++ L +
Sbjct: 2 IAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAAQGITVRQADYGDEAALTS 61
Query: 159 ALRGVRS--IICPSEG---------FISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKG 207
AL+GV +I SE I+ A + GV+ + S L G+
Sbjct: 62 ALQGVEKLLLISSSEVGQRAPQHRNVINAAKAA-GVKFIAYTSLLHADTSPLGLADEHIE 120
Query: 208 NARKLAEQDESMLMASGIPYTIIRTGV-LQNTPG 240
E ML SGI YT++R G +N
Sbjct: 121 T--------EKMLADSGIVYTLLRNGWYSENYLA 146
|
| >2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D Length = 287 | Back alignment and structure |
|---|
Score = 53.1 bits (128), Expect = 3e-08
Identities = 36/193 (18%), Positives = 62/193 (32%), Gaps = 32/193 (16%)
Query: 101 VLVTDGDSDIGQMVILSLI--VKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKT 158
+ VT +G +VI L+ V ++I A+V++ A VE GD + + L+
Sbjct: 3 IAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLADQGVEVRHGDYNQPESLQK 62
Query: 159 ALRGVRS--IICPSEG-----------FISNAGSLKGVQHVILLSQLSVYRGSGGIQALM 205
A GV I + A GV+H+ + +
Sbjct: 63 AFAGVSKLLFISGPHYDNTLLIVQHANVV-KAARDAGVKHIAYTGYAFAEESIIPLAHVH 121
Query: 206 KGNARKLAEQDESMLMASGIPYTIIRTGV-LQNTPGGKQGFQFEEG----CAANGSLS-- 258
E + + IPYT +R + E G A +G ++
Sbjct: 122 LAT--------EYAIRTTNIPYTFLRNALYTDFFVNEGLRASTESGAIVTNAGSGIVNSV 173
Query: 259 -KEDAAFICVEAL 270
+ + A L
Sbjct: 174 TRNELALAAATVL 186
|
| >2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A Length = 299 | Back alignment and structure |
|---|
Score = 50.8 bits (122), Expect = 1e-07
Identities = 26/168 (15%), Positives = 62/168 (36%), Gaps = 21/168 (12%)
Query: 101 VLVTDGDSDIGQMVILSLI-VKRTRIKALVKD--KRNAMESFGTYVESMAGDASNKKFLK 157
V+V G G V +L+ +++ + ++ K+ A E E + GD ++ ++
Sbjct: 8 VVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRLQGAEVVQGDQDDQVIME 67
Query: 158 TALRGVRSIICPSEGF--------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQA 203
AL G + + + +++ G+ +V+ ++ + + G A
Sbjct: 68 LALNGAYATFIVTNYWESCSQEQEVKQGKLLADLARRLGLHYVVYSGLENIKKLTAGRLA 127
Query: 204 LMKGNARKLAEQDESMLMASGIPYTIIRTGV-LQNTPGGKQGFQFEEG 250
+ + E+ G+P T +R +N + +G
Sbjct: 128 AAHFDGKGEVEE---YFRDIGVPMTSVRLPCYFENLLSHFLPQKAPDG 172
|
| >2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} Length = 307 | Back alignment and structure |
|---|
Score = 42.6 bits (100), Expect = 7e-05
Identities = 26/151 (17%), Positives = 59/151 (39%), Gaps = 20/151 (13%)
Query: 101 VLVTDGDSDIGQMVILSLI---------VKRTRIKALVKDKRNAMESFGTY-VESMAGDA 150
+L+ IG+ ++ + I V++T A + K ++++ + V + GD
Sbjct: 5 ILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDI 64
Query: 151 SNKKFLKTALRGVRSIIC-------PSEGFISNAGSLKGVQHVILLSQLSV-YRGSGGIQ 202
++ + L A++ V +IC + I A G S+ + ++
Sbjct: 65 NDHETLVKAIKQVDIVICAAGRLLIEDQVKIIKAIKEAGNVKKFFPSEFGLDVDRHDAVE 124
Query: 203 ALMKGNARKLAEQDESMLMASGIPYTIIRTG 233
+ + K + + + A G+PYT +
Sbjct: 125 PVRQVFEEKASIRRV--IEAEGVPYTYLCCH 153
|
| >1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 Length = 308 | Back alignment and structure |
|---|
Score = 42.2 bits (99), Expect = 1e-04
Identities = 27/150 (18%), Positives = 47/150 (31%), Gaps = 19/150 (12%)
Query: 101 VLVTDGDSDIGQMVILSLIVKRTRIKALV--------KDKRNAMESFGTY-VESMAGDAS 151
+L+ IG+ V + + LV +K +ESF + G
Sbjct: 7 ILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSID 66
Query: 152 NKKFLKTALRGVRSIIC-------PSEGFISNAGSLKGVQHVILLSQLSV-YRGSGGIQA 203
+ L A++ V +I S+ I A G S+ ++
Sbjct: 67 DHASLVEAVKNVDVVISTVGSLQIESQVNIIKAIKEVGTVKRFFPSEFGNDVDNVHAVEP 126
Query: 204 LMKGNARKLAEQDESMLMASGIPYTIIRTG 233
K + + A GIPYT + +
Sbjct: 127 AKSVFEVKAKVRRA--IEAEGIPYTYVSSN 154
|
| >1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 Length = 313 | Back alignment and structure |
|---|
Score = 39.9 bits (93), Expect = 6e-04
Identities = 25/152 (16%), Positives = 45/152 (29%), Gaps = 19/152 (12%)
Query: 101 VLVTDGDSDIGQMVILSLIVKRTRIKALV-------KDKRNAMESFGTY-VESMAGDASN 152
VL+ G IG+ ++ + I L DK + F + + +
Sbjct: 7 VLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDD 66
Query: 153 KKFLKTALRGVRSIICPSEGFIS-----------NAGSLKGVQHVILLSQLSVYRGSGGI 201
+ L AL+ V +I G + A G L S+ +
Sbjct: 67 HQRLVDALKQVDVVISALAGGVLSHHILEQLKLVEAIKEAGNIKRFLPSEFGMDPDIMEH 126
Query: 202 QALMKGNARKLAEQDESMLMASGIPYTIIRTG 233
+ + A+ IPYT + +
Sbjct: 127 ALQPGSITFIDKRKVRRAIEAASIPYTYVSSN 158
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 305 | |||
| 3dqp_A | 219 | Oxidoreductase YLBE; alpha-beta protein., structur | 99.95 | |
| 3e8x_A | 236 | Putative NAD-dependent epimerase/dehydratase; stru | 99.95 | |
| 1xq6_A | 253 | Unknown protein; structural genomics, protein stru | 99.95 | |
| 3e48_A | 289 | Putative nucleoside-diphosphate-sugar epimerase; a | 99.94 | |
| 2jl1_A | 287 | Triphenylmethane reductase; oxidoreductase, biorem | 99.94 | |
| 3qvo_A | 236 | NMRA family protein; structural genomics, PSI-biol | 99.94 | |
| 1hdo_A | 206 | Biliverdin IX beta reductase; foetal metabolism, H | 99.94 | |
| 3ruf_A | 351 | WBGU; rossmann fold, UDP-hexose 4-epimerase, isome | 99.94 | |
| 2x4g_A | 342 | Nucleoside-diphosphate-sugar epimerase; isomerase; | 99.94 | |
| 3m2p_A | 311 | UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J | 99.94 | |
| 3slg_A | 372 | PBGP3 protein; structural genomics, seattle struct | 99.94 | |
| 4id9_A | 347 | Short-chain dehydrogenase/reductase; putative dehy | 99.94 | |
| 2zcu_A | 286 | Uncharacterized oxidoreductase YTFG; alpha-beta sa | 99.94 | |
| 3ius_A | 286 | Uncharacterized conserved protein; APC63810, silic | 99.94 | |
| 3dhn_A | 227 | NAD-dependent epimerase/dehydratase; reductase, PF | 99.93 | |
| 3r6d_A | 221 | NAD-dependent epimerase/dehydratase; structural ge | 99.93 | |
| 2wm3_A | 299 | NMRA-like family domain containing protein 1; unkn | 99.93 | |
| 3ew7_A | 221 | LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend | 99.93 | |
| 3i6i_A | 346 | Putative leucoanthocyanidin reductase 1; rossmann | 99.92 | |
| 4egb_A | 346 | DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce | 99.92 | |
| 3h2s_A | 224 | Putative NADH-flavin reductase; Q03B84, NESG, LCR1 | 99.92 | |
| 2c5a_A | 379 | GDP-mannose-3', 5'-epimerase; short chain dehydrat | 99.92 | |
| 3ko8_A | 312 | NAD-dependent epimerase/dehydratase; isomerase, UD | 99.92 | |
| 1xgk_A | 352 | Nitrogen metabolite repression regulator NMRA; ros | 99.92 | |
| 3ehe_A | 313 | UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, | 99.92 | |
| 2gas_A | 307 | Isoflavone reductase; NADPH-dependent reductase, o | 99.92 | |
| 1sb8_A | 352 | WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN | 99.92 | |
| 3gpi_A | 286 | NAD-dependent epimerase/dehydratase; structural ge | 99.91 | |
| 2r6j_A | 318 | Eugenol synthase 1; phenylpropene, PIP reductase, | 99.91 | |
| 1qyd_A | 313 | Pinoresinol-lariciresinol reductase; NADPH-depende | 99.91 | |
| 3enk_A | 341 | UDP-glucose 4-epimerase; seattle structural genomi | 99.91 | |
| 1qyc_A | 308 | Phenylcoumaran benzylic ether reductase PT1; NADPH | 99.91 | |
| 2c20_A | 330 | UDP-glucose 4-epimerase; carbohydrate metabolism, | 99.91 | |
| 2q1s_A | 377 | Putative nucleotide sugar epimerase/ dehydratase; | 99.91 | |
| 2pk3_A | 321 | GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor | 99.91 | |
| 3c1o_A | 321 | Eugenol synthase; phenylpropene, PIP reductase, sh | 99.91 | |
| 2pzm_A | 330 | Putative nucleotide sugar epimerase/ dehydratase; | 99.91 | |
| 1rkx_A | 357 | CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; | 99.91 | |
| 2bll_A | 345 | Protein YFBG; decarboxylase, short chain dehydroge | 99.91 | |
| 1orr_A | 347 | CDP-tyvelose-2-epimerase; rossmann fold, short-cha | 99.9 | |
| 1oc2_A | 348 | DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos | 99.9 | |
| 2q1w_A | 333 | Putative nucleotide sugar epimerase/ dehydratase; | 99.9 | |
| 2p5y_A | 311 | UDP-glucose 4-epimerase; TTHA0591, structural geno | 99.9 | |
| 1r6d_A | 337 | TDP-glucose-4,6-dehydratase; rossmann fold, short- | 99.9 | |
| 2yy7_A | 312 | L-threonine dehydrogenase; thermolabIle, flavobact | 99.9 | |
| 1rpn_A | 335 | GDP-mannose 4,6-dehydratase; short-chain dehydroge | 99.9 | |
| 3sxp_A | 362 | ADP-L-glycero-D-mannoheptose-6-epimerase; rossman | 99.9 | |
| 1i24_A | 404 | Sulfolipid biosynthesis protein SQD1; SDR, short-c | 99.9 | |
| 1ek6_A | 348 | UDP-galactose 4-epimerase; short-chain dehydrogena | 99.9 | |
| 4b8w_A | 319 | GDP-L-fucose synthase; oxidoreductase; HET: NAP GD | 99.89 | |
| 2ydy_A | 315 | Methionine adenosyltransferase 2 subunit beta; oxi | 99.89 | |
| 4b4o_A | 298 | Epimerase family protein SDR39U1; isomerase; HET: | 99.89 | |
| 3sc6_A | 287 | DTDP-4-dehydrorhamnose reductase; RFBD, structural | 99.89 | |
| 2hun_A | 336 | 336AA long hypothetical DTDP-glucose 4,6-dehydrat; | 99.89 | |
| 2gn4_A | 344 | FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann | 99.89 | |
| 1gy8_A | 397 | UDP-galactose 4-epimerase; oxidoreductase; HET: NA | 99.89 | |
| 1e6u_A | 321 | GDP-fucose synthetase; epimerase/reductase, SDR, R | 99.89 | |
| 1kew_A | 361 | RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo | 99.88 | |
| 1vl0_A | 292 | DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s | 99.88 | |
| 1t2a_A | 375 | GDP-mannose 4,6 dehydratase; structural genomics c | 99.88 | |
| 2x6t_A | 357 | ADP-L-glycero-D-manno-heptose-6-epimerase; isomera | 99.88 | |
| 3vps_A | 321 | TUNA, NAD-dependent epimerase/dehydratase; tunicam | 99.88 | |
| 1y1p_A | 342 | ARII, aldehyde reductase II; rossmann fold, short | 99.88 | |
| 4f6c_A | 427 | AUSA reductase domain protein; thioester reductase | 99.88 | |
| 1n2s_A | 299 | DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold | 99.88 | |
| 2b69_A | 343 | UDP-glucuronate decarboxylase 1; UDP-glucoronic ac | 99.87 | |
| 3ajr_A | 317 | NDP-sugar epimerase; L-threonine dehydrogenase, L- | 99.87 | |
| 4dqv_A | 478 | Probable peptide synthetase NRP (peptide synthase; | 99.87 | |
| 1eq2_A | 310 | ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin | 99.87 | |
| 3ay3_A | 267 | NAD-dependent epimerase/dehydratase; glucuronic ac | 99.87 | |
| 3st7_A | 369 | Capsular polysaccharide synthesis enzyme CAP5F; ro | 99.87 | |
| 3rft_A | 267 | Uronate dehydrogenase; apoenzyme, rossmann fold, N | 99.87 | |
| 2hrz_A | 342 | AGR_C_4963P, nucleoside-diphosphate-sugar epimeras | 99.87 | |
| 1udb_A | 338 | Epimerase, UDP-galactose-4-epimerase; isomerase; H | 99.87 | |
| 2z1m_A | 345 | GDP-D-mannose dehydratase; short-chain dehydrogena | 99.86 | |
| 1db3_A | 372 | GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya | 99.86 | |
| 2v6g_A | 364 | Progesterone 5-beta-reductase; tyrosine-dependent | 99.86 | |
| 2p4h_X | 322 | Vestitone reductase; NADPH-dependent reductase, is | 99.86 | |
| 1z7e_A | 660 | Protein aRNA; rossmann fold, OB-like fold, hydrola | 99.86 | |
| 3nzo_A | 399 | UDP-N-acetylglucosamine 4,6-dehydratase; structura | 99.86 | |
| 2a35_A | 215 | Hypothetical protein PA4017; alpha-beta-alpha sand | 99.86 | |
| 1n7h_A | 381 | GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, | 99.86 | |
| 2c29_D | 337 | Dihydroflavonol 4-reductase; flavonoids, short deh | 99.86 | |
| 2rh8_A | 338 | Anthocyanidin reductase; flavonoids, rossmann fold | 99.86 | |
| 4f6l_B | 508 | AUSA reductase domain protein; thioester reductase | 99.86 | |
| 1z45_A | 699 | GAL10 bifunctional protein; epimerase, mutarotase, | 99.84 | |
| 2bka_A | 242 | CC3, TAT-interacting protein TIP30; NADPH, PEG600, | 99.84 | |
| 3oh8_A | 516 | Nucleoside-diphosphate sugar epimerase (SULA FAMI; | 99.84 | |
| 2ggs_A | 273 | 273AA long hypothetical DTDP-4-dehydrorhamnose red | 99.84 | |
| 2bgk_A | 278 | Rhizome secoisolariciresinol dehydrogenase; oxidor | 99.83 | |
| 3m1a_A | 281 | Putative dehydrogenase; short, PSI, MCSG, structur | 99.82 | |
| 1spx_A | 278 | Short-chain reductase family member (5L265); paral | 99.81 | |
| 2z1n_A | 260 | Dehydrogenase; reductase, SDR, oxidoreductase; 1.8 | 99.81 | |
| 2cfc_A | 250 | 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor | 99.81 | |
| 1nff_A | 260 | Putative oxidoreductase RV2002; directed evolution | 99.81 | |
| 1fmc_A | 255 | 7 alpha-hydroxysteroid dehydrogenase; short-chain | 99.8 | |
| 2pnf_A | 248 | 3-oxoacyl-[acyl-carrier-protein] reductase; short | 99.8 | |
| 3ai3_A | 263 | NADPH-sorbose reductase; rossmann-fold, NADPH-depe | 99.8 | |
| 1w6u_A | 302 | 2,4-dienoyl-COA reductase, mitochondrial precursor | 99.79 | |
| 2ehd_A | 234 | Oxidoreductase, oxidoreductase, short-chain dehydr | 99.79 | |
| 4e6p_A | 259 | Probable sorbitol dehydrogenase (L-iditol 2-dehyd; | 99.79 | |
| 3gem_A | 260 | Short chain dehydrogenase; structural genomics, AP | 99.79 | |
| 3un1_A | 260 | Probable oxidoreductase; structural genomics, PSI- | 99.79 | |
| 1hdc_A | 254 | 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi | 99.79 | |
| 1vl8_A | 267 | Gluconate 5-dehydrogenase; TM0441, structural geno | 99.78 | |
| 2uvd_A | 246 | 3-oxoacyl-(acyl-carrier-protein) reductase; beta-k | 99.78 | |
| 2ew8_A | 249 | (S)-1-phenylethanol dehydrogenase; transferase; 2. | 99.78 | |
| 3f9i_A | 249 | 3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto | 99.78 | |
| 3awd_A | 260 | GOX2181, putative polyol dehydrogenase; oxidoreduc | 99.78 | |
| 2dkn_A | 255 | 3-alpha-hydroxysteroid dehydrogenase; oxidoreducta | 99.78 | |
| 3d3w_A | 244 | L-xylulose reductase; uronate cycle, short-chain d | 99.78 | |
| 1iy8_A | 267 | Levodione reductase; oxidoreductase; HET: NAD; 1.6 | 99.78 | |
| 2o23_A | 265 | HADH2 protein; HSD17B10, schad, ERAB, type II HADH | 99.78 | |
| 3ak4_A | 263 | NADH-dependent quinuclidinone reductase; SDR, (R)- | 99.78 | |
| 2q2v_A | 255 | Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore | 99.78 | |
| 3svt_A | 281 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.78 | |
| 2pd6_A | 264 | Estradiol 17-beta-dehydrogenase 8; short-chain deh | 99.78 | |
| 1geg_A | 256 | Acetoin reductase; SDR family, oxidoreductase; HET | 99.78 | |
| 1cyd_A | 244 | Carbonyl reductase; short-chain dehydrogenase, oxi | 99.78 | |
| 2c07_A | 285 | 3-oxoacyl-(acyl-carrier protein) reductase; oxidor | 99.78 | |
| 1zk4_A | 251 | R-specific alcohol dehydrogenase; short chain redu | 99.78 | |
| 3tpc_A | 257 | Short chain alcohol dehydrogenase-related dehydro; | 99.78 | |
| 1xq1_A | 266 | Putative tropinone reducatse; structural genomics, | 99.78 | |
| 3v2h_A | 281 | D-beta-hydroxybutyrate dehydrogenase; structural g | 99.78 | |
| 2fwm_X | 250 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e | 99.78 | |
| 2hq1_A | 247 | Glucose/ribitol dehydrogenase; CTH-1438, structura | 99.78 | |
| 2zat_A | 260 | Dehydrogenase/reductase SDR family member 4; alpha | 99.77 | |
| 2wsb_A | 254 | Galactitol dehydrogenase; oxidoreductase, SDR, ros | 99.77 | |
| 1x1t_A | 260 | D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S | 99.77 | |
| 4dqx_A | 277 | Probable oxidoreductase protein; structural genomi | 99.77 | |
| 1uls_A | 245 | Putative 3-oxoacyl-acyl carrier protein reductase; | 99.77 | |
| 1ja9_A | 274 | 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p | 99.77 | |
| 3tl3_A | 257 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.77 | |
| 3dii_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 99.77 | |
| 2d1y_A | 256 | Hypothetical protein TT0321; strucrtural genomics, | 99.77 | |
| 1uay_A | 242 | Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid | 99.77 | |
| 1o5i_A | 249 | 3-oxoacyl-(acyl carrier protein) reductase; TM1169 | 99.77 | |
| 2ae2_A | 260 | Protein (tropinone reductase-II); oxidoreductase, | 99.77 | |
| 2rhc_B | 277 | Actinorhodin polyketide ketoreductase; oxidoreduct | 99.77 | |
| 2bd0_A | 244 | Sepiapterin reductase; oxidoreductase; HET: NAP BI | 99.77 | |
| 3cxt_A | 291 | Dehydrogenase with different specificities; rossma | 99.77 | |
| 3tzq_B | 271 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.77 | |
| 1ae1_A | 273 | Tropinone reductase-I; oxidoreductase, tropane alk | 99.77 | |
| 3imf_A | 257 | Short chain dehydrogenase; structural genomics, in | 99.76 | |
| 4dmm_A | 269 | 3-oxoacyl-[acyl-carrier-protein] reductase; rossma | 99.76 | |
| 3s55_A | 281 | Putative short-chain dehydrogenase/reductase; stru | 99.76 | |
| 3osu_A | 246 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.76 | |
| 2ekp_A | 239 | 2-deoxy-D-gluconate 3-dehydrogenase; structural ge | 99.76 | |
| 3op4_A | 248 | 3-oxoacyl-[acyl-carrier protein] reductase; 3-keto | 99.76 | |
| 1gee_A | 261 | Glucose 1-dehydrogenase; short-chain dehydrogenase | 99.76 | |
| 3p19_A | 266 | BFPVVD8, putative blue fluorescent protein; rossma | 99.76 | |
| 3pk0_A | 262 | Short-chain dehydrogenase/reductase SDR; ssgcid, s | 99.76 | |
| 3lyl_A | 247 | 3-oxoacyl-(acyl-carrier-protein) reductase; alpha | 99.76 | |
| 3grp_A | 266 | 3-oxoacyl-(acyl carrierprotein) reductase; structu | 99.76 | |
| 4iin_A | 271 | 3-ketoacyl-acyl carrier protein reductase (FABG); | 99.76 | |
| 2ph3_A | 245 | 3-oxoacyl-[acyl carrier protein] reductase; TTHA04 | 99.76 | |
| 2b4q_A | 276 | Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier | 99.76 | |
| 2dtx_A | 264 | Glucose 1-dehydrogenase related protein; rossmann | 99.76 | |
| 2gdz_A | 267 | NAD+-dependent 15-hydroxyprostaglandin dehydrogen; | 99.76 | |
| 2yut_A | 207 | Putative short-chain oxidoreductase; alpha and bet | 99.75 | |
| 1edo_A | 244 | Beta-keto acyl carrier protein reductase; nucleoti | 99.75 | |
| 1hxh_A | 253 | 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b | 99.75 | |
| 3d7l_A | 202 | LIN1944 protein; APC89317, structural genomics, PS | 99.75 | |
| 3gaf_A | 256 | 7-alpha-hydroxysteroid dehydrogenase; seattle stru | 99.75 | |
| 2nm0_A | 253 | Probable 3-oxacyl-(acyl-carrier-protein) reductas; | 99.75 | |
| 3afn_B | 258 | Carbonyl reductase; alpha/beta/alpha, rossmann-fol | 99.75 | |
| 3a28_C | 258 | L-2.3-butanediol dehydrogenase; chiral substrate r | 99.75 | |
| 1xhl_A | 297 | Short-chain dehydrogenase/reductase family member | 99.75 | |
| 2ag5_A | 246 | DHRS6, dehydrogenase/reductase (SDR family) member | 99.75 | |
| 3n74_A | 261 | 3-ketoacyl-(acyl-carrier-protein) reductase; seatt | 99.75 | |
| 1yo6_A | 250 | Putative carbonyl reductase sniffer; tyrosine-depe | 99.75 | |
| 3pgx_A | 280 | Carveol dehydrogenase; structural genomics, seattl | 99.75 | |
| 3tjr_A | 301 | Short chain dehydrogenase; structural genomics, se | 99.75 | |
| 3gk3_A | 269 | Acetoacetyl-COA reductase; acetoacetyl-CO reductas | 99.74 | |
| 3rd5_A | 291 | Mypaa.01249.C; ssgcid, structural genomics, seattl | 99.74 | |
| 3r1i_A | 276 | Short-chain type dehydrogenase/reductase; structur | 99.74 | |
| 3h7a_A | 252 | Short chain dehydrogenase; oxidoreductase, PSI-2, | 99.74 | |
| 3sju_A | 279 | Keto reductase; short-chain dehydrogenase, oxidore | 99.74 | |
| 3v8b_A | 283 | Putative dehydrogenase, possibly 3-oxoacyl-[acyl- | 99.74 | |
| 3ged_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 99.74 | |
| 4egf_A | 266 | L-xylulose reductase; structural genomics, ssgcid, | 99.74 | |
| 3oid_A | 258 | Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa | 99.74 | |
| 3rkr_A | 262 | Short chain oxidoreductase; rossmann fold; HET: NA | 99.74 | |
| 3ppi_A | 281 | 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de | 99.74 | |
| 3tox_A | 280 | Short chain dehydrogenase; structural genomics, PS | 99.74 | |
| 3qiv_A | 253 | Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR | 99.74 | |
| 3gvc_A | 277 | Oxidoreductase, probable short-chain type dehydrog | 99.74 | |
| 3o38_A | 266 | Short chain dehydrogenase; tuberculosis, ortholog | 99.74 | |
| 3rih_A | 293 | Short chain dehydrogenase or reductase; structural | 99.74 | |
| 3ioy_A | 319 | Short-chain dehydrogenase/reductase SDR; structura | 99.74 | |
| 1g0o_A | 283 | Trihydroxynaphthalene reductase; protein-NADPH-act | 99.74 | |
| 1uzm_A | 247 | 3-oxoacyl-[acyl-carrier protein] reductase; beta-k | 99.74 | |
| 3ftp_A | 270 | 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid | 99.74 | |
| 3ucx_A | 264 | Short chain dehydrogenase; ssgcid, seattle structu | 99.74 | |
| 3rwb_A | 247 | TPLDH, pyridoxal 4-dehydrogenase; short chain dehy | 99.74 | |
| 3vtz_A | 269 | Glucose 1-dehydrogenase; rossmann fold, oxidoreduc | 99.73 | |
| 3ezl_A | 256 | Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA | 99.73 | |
| 1xkq_A | 280 | Short-chain reductase family member (5D234); parra | 99.73 | |
| 1h5q_A | 265 | NADP-dependent mannitol dehydrogenase; oxidoreduct | 99.73 | |
| 1fjh_A | 257 | 3alpha-hydroxysteroid dehydrogenase/carbonyl reduc | 99.73 | |
| 1mxh_A | 276 | Pteridine reductase 2; SDR topology, protein-subst | 99.73 | |
| 3i4f_A | 264 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 99.73 | |
| 1xg5_A | 279 | ARPG836; short chain dehydrogenase, human, SGC, st | 99.73 | |
| 4da9_A | 280 | Short-chain dehydrogenase/reductase; structural ge | 99.73 | |
| 3l77_A | 235 | Short-chain alcohol dehydrogenase; oxidoreductase; | 99.73 | |
| 3asu_A | 248 | Short-chain dehydrogenase/reductase SDR; SDR famil | 99.73 | |
| 3sx2_A | 278 | Putative 3-ketoacyl-(acyl-carrier-protein) reduct; | 99.73 | |
| 3uf0_A | 273 | Short-chain dehydrogenase/reductase SDR; gluconate | 99.73 | |
| 4fc7_A | 277 | Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman | 99.72 | |
| 2jah_A | 247 | Clavulanic acid dehydrogenase; short-chain dehydro | 99.72 | |
| 4ibo_A | 271 | Gluconate dehydrogenase; enzyme function initiativ | 99.72 | |
| 3qlj_A | 322 | Short chain dehydrogenase; structural genomics, se | 99.72 | |
| 4dyv_A | 272 | Short-chain dehydrogenase/reductase SDR; structura | 99.72 | |
| 1yxm_A | 303 | Pecra, peroxisomal trans 2-enoyl COA reductase; pe | 99.72 | |
| 4eso_A | 255 | Putative oxidoreductase; NADP, structural genomics | 99.72 | |
| 1zem_A | 262 | Xylitol dehydrogenase; rossmann fold, dinucleotide | 99.72 | |
| 1yb1_A | 272 | 17-beta-hydroxysteroid dehydrogenase type XI; shor | 99.72 | |
| 4iiu_A | 267 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 99.72 | |
| 3r3s_A | 294 | Oxidoreductase; structural genomics, csgid, center | 99.72 | |
| 3l6e_A | 235 | Oxidoreductase, short-chain dehydrogenase/reducta; | 99.72 | |
| 3ijr_A | 291 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.71 | |
| 3guy_A | 230 | Short-chain dehydrogenase/reductase SDR; structura | 99.71 | |
| 3e03_A | 274 | Short chain dehydrogenase; structural genomics, PS | 99.71 | |
| 4b79_A | 242 | PA4098, probable short-chain dehydrogenase; oxidor | 99.71 | |
| 3lf2_A | 265 | Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross | 99.71 | |
| 3uxy_A | 266 | Short-chain dehydrogenase/reductase SDR; structura | 99.71 | |
| 2a4k_A | 263 | 3-oxoacyl-[acyl carrier protein] reductase; reduct | 99.71 | |
| 3nyw_A | 250 | Putative oxidoreductase; fatty acid synthesis,3-ox | 99.71 | |
| 3uve_A | 286 | Carveol dehydrogenase ((+)-trans-carveol dehydrog; | 99.71 | |
| 3u9l_A | 324 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.71 | |
| 2nwq_A | 272 | Probable short-chain dehydrogenase; oxidoreductase | 99.71 | |
| 3ctm_A | 279 | Carbonyl reductase; alcohol dehydrogenase, short-c | 99.71 | |
| 3tsc_A | 277 | Putative oxidoreductase; structural genomics, seat | 99.7 | |
| 3v2g_A | 271 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.7 | |
| 1sby_A | 254 | Alcohol dehydrogenase; ternary complex, NAD, trifl | 99.7 | |
| 3sc4_A | 285 | Short chain dehydrogenase (A0QTM2 homolog); ssgcid | 99.7 | |
| 1sny_A | 267 | Sniffer CG10964-PA; alpha and beta protein, rossma | 99.7 | |
| 4e3z_A | 272 | Putative oxidoreductase protein; PSI-biology, stru | 99.7 | |
| 3edm_A | 259 | Short chain dehydrogenase; structural genomics, ox | 99.7 | |
| 4fn4_A | 254 | Short chain dehydrogenase; NADH-binding, rossmann | 99.7 | |
| 3t7c_A | 299 | Carveol dehydrogenase; structural genomics, seattl | 99.69 | |
| 3t4x_A | 267 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.69 | |
| 3tfo_A | 264 | Putative 3-oxoacyl-(acyl-carrier-protein) reducta; | 99.69 | |
| 3rku_A | 287 | Oxidoreductase YMR226C; substrate fingerprint, sho | 99.69 | |
| 4e4y_A | 244 | Short chain dehydrogenase family protein; structur | 99.68 | |
| 3ksu_A | 262 | 3-oxoacyl-acyl carrier protein reductase; structur | 99.68 | |
| 3oec_A | 317 | Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; | 99.68 | |
| 3f1l_A | 252 | Uncharacterized oxidoreductase YCIK; E. coli, NADP | 99.68 | |
| 4imr_A | 275 | 3-oxoacyl-(acyl-carrier-protein) reductase; oxidor | 99.68 | |
| 1yde_A | 270 | Retinal dehydrogenase/reductase 3; oxidoreductase, | 99.68 | |
| 4dry_A | 281 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.68 | |
| 3orf_A | 251 | Dihydropteridine reductase; alpha-beta-alpha sandw | 99.68 | |
| 3e9n_A | 245 | Putative short-chain dehydrogenase/reductase; stru | 99.68 | |
| 3oig_A | 266 | Enoyl-[acyl-carrier-protein] reductase [NADH]; fat | 99.68 | |
| 4gkb_A | 258 | 3-oxoacyl-[acyl-carrier protein] reductase; putati | 99.68 | |
| 3pxx_A | 287 | Carveol dehydrogenase; structural genomics, seattl | 99.68 | |
| 2x9g_A | 288 | PTR1, pteridine reductase; short chain dehydrogena | 99.68 | |
| 3u5t_A | 267 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.68 | |
| 2p91_A | 285 | Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD | 99.67 | |
| 3is3_A | 270 | 17BETA-hydroxysteroid dehydrogenase; short chain d | 99.67 | |
| 1xu9_A | 286 | Corticosteroid 11-beta-dehydrogenase, isozyme 1; h | 99.67 | |
| 2qhx_A | 328 | Pteridine reductase 1; oxidoreductase, short-chain | 99.67 | |
| 3zv4_A | 281 | CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox | 99.67 | |
| 3kzv_A | 254 | Uncharacterized oxidoreductase YIR035C; cytoplasmi | 99.67 | |
| 1wma_A | 276 | Carbonyl reductase [NADPH] 1; oxidoreductase; HET: | 99.67 | |
| 1ooe_A | 236 | Dihydropteridine reductase; structural genomics, P | 99.67 | |
| 2wyu_A | 261 | Enoyl-[acyl carrier protein] reductase; oxidoreduc | 99.67 | |
| 1dhr_A | 241 | Dihydropteridine reductase; oxidoreductase(acting | 99.66 | |
| 3ek2_A | 271 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 99.66 | |
| 3k31_A | 296 | Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI | 99.66 | |
| 1e7w_A | 291 | Pteridine reductase; dihydrofolate reductase, shor | 99.66 | |
| 3icc_A | 255 | Putative 3-oxoacyl-(acyl carrier protein) reducta; | 99.66 | |
| 3nrc_A | 280 | Enoyl-[acyl-carrier-protein] reductase (NADH); ros | 99.65 | |
| 2qq5_A | 260 | DHRS1, dehydrogenase/reductase SDR family member 1 | 99.65 | |
| 1qsg_A | 265 | Enoyl-[acyl-carrier-protein] reductase; enoyl redu | 99.65 | |
| 3i1j_A | 247 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.65 | |
| 3kvo_A | 346 | Hydroxysteroid dehydrogenase-like protein 2; HSDL2 | 99.65 | |
| 2pd4_A | 275 | Enoyl-[acyl-carrier-protein] reductase [NADH]; ant | 99.64 | |
| 3grk_A | 293 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 99.64 | |
| 3uce_A | 223 | Dehydrogenase; rossmann fold, oxidoreductase; HET: | 99.64 | |
| 2fr1_A | 486 | Erythromycin synthase, eryai; short chain dehydrog | 99.63 | |
| 4g81_D | 255 | Putative hexonate dehydrogenase; enzyme function i | 99.63 | |
| 4fs3_A | 256 | Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; | 99.63 | |
| 3gdg_A | 267 | Probable NADP-dependent mannitol dehydrogenase; ro | 99.62 | |
| 1zmt_A | 254 | Haloalcohol dehalogenase HHEC; halohydrin dehaloge | 99.62 | |
| 4fgs_A | 273 | Probable dehydrogenase protein; PSI-biology, nysgr | 99.61 | |
| 1jtv_A | 327 | 17 beta-hydroxysteroid dehydrogenase type 1; stero | 99.6 | |
| 4hp8_A | 247 | 2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi | 99.6 | |
| 2z5l_A | 511 | Tylkr1, tylactone synthase starter module and modu | 99.59 | |
| 4h15_A | 261 | Short chain alcohol dehydrogenase-related dehydro; | 99.59 | |
| 1zmo_A | 244 | Halohydrin dehalogenase; haloalcohol dehalogenase, | 99.57 | |
| 3o26_A | 311 | Salutaridine reductase; short chain dehydrogenase/ | 99.57 | |
| 3u0b_A | 454 | Oxidoreductase, short chain dehydrogenase/reducta | 99.56 | |
| 1gz6_A | 319 | Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF | 99.53 | |
| 1oaa_A | 259 | Sepiapterin reductase; tetrahydrobiopterin, oxidor | 99.53 | |
| 2h7i_A | 269 | Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi | 99.52 | |
| 3mje_A | 496 | AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1. | 99.45 | |
| 3qp9_A | 525 | Type I polyketide synthase pikaii; rossmann fold, | 99.41 | |
| 3oml_A | 613 | GH14720P, peroxisomal multifunctional enzyme type | 99.38 | |
| 3lt0_A | 329 | Enoyl-ACP reductase; triclosan, triclosan variant, | 99.34 | |
| 1d7o_A | 297 | Enoyl-[acyl-carrier protein] reductase (NADH) PRE; | 99.32 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 99.28 | |
| 3ic5_A | 118 | Putative saccharopine dehydrogenase; structural ge | 99.27 | |
| 2ptg_A | 319 | Enoyl-acyl carrier reductase; apicomplexa, enoyl ( | 99.27 | |
| 2o2s_A | 315 | Enoyl-acyl carrier reductase; enoyl reductase, tri | 99.24 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 99.14 | |
| 3s8m_A | 422 | Enoyl-ACP reductase; rossmann fold, oxidoreductase | 99.13 | |
| 2uv8_A | 1887 | Fatty acid synthase subunit alpha (FAS2); fatty ac | 99.02 | |
| 3slk_A | 795 | Polyketide synthase extender module 2; rossmann fo | 99.02 | |
| 3zu3_A | 405 | Putative reductase YPO4104/Y4119/YP_4011; oxidored | 99.02 | |
| 4eue_A | 418 | Putative reductase CA_C0462; TER, biofuel, synthet | 99.02 | |
| 2uv9_A | 1878 | Fatty acid synthase alpha subunits; fungal, dehydr | 98.97 | |
| 1y7t_A | 327 | Malate dehydrogenase; NAD-dependent-MDH-NADPH comp | 98.93 | |
| 2pff_A | 1688 | Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl | 98.92 | |
| 2hmt_A | 144 | YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane | 98.85 | |
| 3llv_A | 141 | Exopolyphosphatase-related protein; NAD(P)-binding | 98.82 | |
| 1lu9_A | 287 | Methylene tetrahydromethanopterin dehydrogenase; a | 98.72 | |
| 1lss_A | 140 | TRK system potassium uptake protein TRKA homolog; | 98.7 | |
| 1id1_A | 153 | Putative potassium channel protein; RCK domain, E. | 98.68 | |
| 2g1u_A | 155 | Hypothetical protein TM1088A; structural genomics, | 98.67 | |
| 3abi_A | 365 | Putative uncharacterized protein PH1688; L-lysine | 98.63 | |
| 2vz8_A | 2512 | Fatty acid synthase; transferase, phosphopantethei | 98.53 | |
| 3c85_A | 183 | Putative glutathione-regulated potassium-efflux S | 98.53 | |
| 3fwz_A | 140 | Inner membrane protein YBAL; TRKA-N domain, E.coli | 98.52 | |
| 4ina_A | 405 | Saccharopine dehydrogenase; structural genomics, P | 98.44 | |
| 3l4b_C | 218 | TRKA K+ channel protien TM1088B; potassium channel | 98.42 | |
| 3zen_D | 3089 | Fatty acid synthase; transferase, mycolic acid bio | 98.39 | |
| 1ff9_A | 450 | Saccharopine reductase; lysine biosynthesis, alpha | 98.39 | |
| 1smk_A | 326 | Malate dehydrogenase, glyoxysomal; tricarboxylic c | 98.32 | |
| 2aef_A | 234 | Calcium-gated potassium channel MTHK; rossmann fol | 98.3 | |
| 2axq_A | 467 | Saccharopine dehydrogenase; rossmann fold variant, | 98.27 | |
| 1b8p_A | 329 | Protein (malate dehydrogenase); oxidoreductase; 1. | 98.2 | |
| 2gk4_A | 232 | Conserved hypothetical protein; alpha-beta-alpha s | 98.19 | |
| 1pqw_A | 198 | Polyketide synthase; rossmann fold, dimer, structu | 98.13 | |
| 4ggo_A | 401 | Trans-2-enoyl-COA reductase; rossmann fold, oxidor | 98.08 | |
| 2z2v_A | 365 | Hypothetical protein PH1688; L-lysine dehydrogenas | 98.02 | |
| 1hye_A | 313 | L-lactate/malate dehydrogenase; nucleotide binding | 98.0 | |
| 1u7z_A | 226 | Coenzyme A biosynthesis bifunctional protein coabc | 97.99 | |
| 3l9w_A | 413 | Glutathione-regulated potassium-efflux system Pro | 97.95 | |
| 1o6z_A | 303 | MDH, malate dehydrogenase; halophilic, ION-binding | 97.85 | |
| 1lnq_A | 336 | MTHK channels, potassium channel related protein; | 97.83 | |
| 2hcy_A | 347 | Alcohol dehydrogenase 1; tetramer of asymmetric di | 97.82 | |
| 4g65_A | 461 | TRK system potassium uptake protein TRKA; structur | 97.74 | |
| 3tnl_A | 315 | Shikimate dehydrogenase; structural genomics, cent | 97.69 | |
| 1jay_A | 212 | Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma | 97.67 | |
| 2eez_A | 369 | Alanine dehydrogenase; TTHA0216, structural genomi | 97.65 | |
| 2nqt_A | 352 | N-acetyl-gamma-glutamyl-phosphate reductase; apopr | 97.62 | |
| 1qor_A | 327 | Quinone oxidoreductase; HET: NAP; 2.20A {Escherich | 97.55 | |
| 1v3u_A | 333 | Leukotriene B4 12- hydroxydehydrogenase/prostaglan | 97.53 | |
| 2hjs_A | 340 | USG-1 protein homolog; aspartate-semialdehyde dehy | 97.53 | |
| 4b7c_A | 336 | Probable oxidoreductase; NADP cofactor, rossmann f | 97.48 | |
| 2vns_A | 215 | Metalloreductase steap3; metal-binding, transmembr | 97.46 | |
| 2eih_A | 343 | Alcohol dehydrogenase; zinc ION binding protein, s | 97.43 | |
| 1yb5_A | 351 | Quinone oxidoreductase; medium-chain dehydrogenase | 97.42 | |
| 2j3h_A | 345 | NADP-dependent oxidoreductase P1; double bond redu | 97.4 | |
| 1wly_A | 333 | CAAR, 2-haloacrylate reductase; NADPH-dependent ox | 97.37 | |
| 5mdh_A | 333 | Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH | 97.35 | |
| 2r00_A | 336 | Aspartate-semialdehyde dehydrogenase; conformation | 97.3 | |
| 3c24_A | 286 | Putative oxidoreductase; YP_511008.1, structural g | 97.29 | |
| 1pjc_A | 361 | Protein (L-alanine dehydrogenase); oxidoreductase, | 97.28 | |
| 2ozp_A | 345 | N-acetyl-gamma-glutamyl-phosphate reductase; amino | 97.26 | |
| 1iz0_A | 302 | Quinone oxidoreductase; APO-enzyme, riken structur | 97.26 | |
| 4g65_A | 461 | TRK system potassium uptake protein TRKA; structur | 97.25 | |
| 4dup_A | 353 | Quinone oxidoreductase; PSI-biology, structural ge | 97.25 | |
| 2zb4_A | 357 | Prostaglandin reductase 2; rossmann fold, alternat | 97.25 | |
| 2c0c_A | 362 | Zinc binding alcohol dehydrogenase, domain contain | 97.23 | |
| 1jw9_B | 249 | Molybdopterin biosynthesis MOEB protein; MOEB: mod | 97.22 | |
| 2j8z_A | 354 | Quinone oxidoreductase; medium-chain dehydrogenase | 97.21 | |
| 3t4e_A | 312 | Quinate/shikimate dehydrogenase; structural genomi | 97.2 | |
| 1nyt_A | 271 | Shikimate 5-dehydrogenase; alpha/beta domains, WID | 97.2 | |
| 3jyo_A | 283 | Quinate/shikimate dehydrogenase; enzyme-cofactor c | 97.18 | |
| 3pwk_A | 366 | Aspartate-semialdehyde dehydrogenase; NADP binding | 97.16 | |
| 3jyn_A | 325 | Quinone oxidoreductase; rossmann fold, protein-NAD | 97.14 | |
| 3don_A | 277 | Shikimate dehydrogenase; alpha-beta structure, ros | 97.12 | |
| 3oj0_A | 144 | Glutr, glutamyl-tRNA reductase; structural genomic | 97.11 | |
| 2egg_A | 297 | AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff | 97.1 | |
| 1yqd_A | 366 | Sinapyl alcohol dehydrogenase; lignin, monolignol, | 97.09 | |
| 1rjw_A | 339 | ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD | 97.09 | |
| 1ys4_A | 354 | Aspartate-semialdehyde dehydrogenase; oxidoreducta | 97.08 | |
| 1xyg_A | 359 | Putative N-acetyl-gamma-glutamyl-phosphate reduct; | 97.08 | |
| 1p9l_A | 245 | Dihydrodipicolinate reductase; oxidoreductase, lys | 97.07 | |
| 2ew2_A | 316 | 2-dehydropantoate 2-reductase, putative; alpha-str | 97.04 | |
| 1mld_A | 314 | Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D | 97.03 | |
| 3qwb_A | 334 | Probable quinone oxidoreductase; rossmann fold, qu | 96.98 | |
| 3orq_A | 377 | N5-carboxyaminoimidazole ribonucleotide synthetas; | 96.97 | |
| 1jvb_A | 347 | NAD(H)-dependent alcohol dehydrogenase; archaeon, | 96.97 | |
| 2vhw_A | 377 | Alanine dehydrogenase; NAD, secreted, oxidoreducta | 96.94 | |
| 4eye_A | 342 | Probable oxidoreductase; structural genomics, niai | 96.91 | |
| 2h78_A | 302 | Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601 | 96.89 | |
| 3h8v_A | 292 | Ubiquitin-like modifier-activating enzyme 5; rossm | 96.89 | |
| 1t4b_A | 367 | Aspartate-semialdehyde dehydrogenase; asadh, HOSR, | 96.89 | |
| 1dih_A | 273 | Dihydrodipicolinate reductase; oxidoreductase; HET | 96.89 | |
| 2d8a_A | 348 | PH0655, probable L-threonine 3-dehydrogenase; pyro | 96.87 | |
| 4e4t_A | 419 | Phosphoribosylaminoimidazole carboxylase, ATPase; | 96.87 | |
| 2rir_A | 300 | Dipicolinate synthase, A chain; structural genomic | 96.84 | |
| 3gms_A | 340 | Putative NADPH:quinone reductase; structural genom | 96.82 | |
| 2pv7_A | 298 | T-protein [includes: chorismate mutase (EC 5.4.99 | 96.81 | |
| 3pef_A | 287 | 6-phosphogluconate dehydrogenase, NAD-binding; gam | 96.8 | |
| 3k5i_A | 403 | Phosphoribosyl-aminoimidazole carboxylase; purine | 96.78 | |
| 3doj_A | 310 | AT3G25530, dehydrogenase-like protein; gamma-hydro | 96.78 | |
| 3pi7_A | 349 | NADH oxidoreductase; groes-like fold, NAD(P)-bindi | 96.78 | |
| 4a0s_A | 447 | Octenoyl-COA reductase/carboxylase; oxidoreductase | 96.78 | |
| 3d4o_A | 293 | Dipicolinate synthase subunit A; NP_243269.1, stru | 96.78 | |
| 4dll_A | 320 | 2-hydroxy-3-oxopropionate reductase; structural ge | 96.77 | |
| 3dr3_A | 337 | N-acetyl-gamma-glutamyl-phosphate reductase; csgid | 96.76 | |
| 3phh_A | 269 | Shikimate dehydrogenase; shikimate pathway, helico | 96.72 | |
| 3fi9_A | 343 | Malate dehydrogenase; structural genomics, oxidore | 96.7 | |
| 1y81_A | 138 | Conserved hypothetical protein; hyperthermophIle, | 96.7 | |
| 4gx0_A | 565 | TRKA domain protein; membrane protein, ION channel | 96.69 | |
| 1zud_1 | 251 | Adenylyltransferase THIF; thiamin, thiazole, prote | 96.67 | |
| 2ep5_A | 350 | 350AA long hypothetical aspartate-semialdehyde deh | 96.64 | |
| 3ax6_A | 380 | Phosphoribosylaminoimidazole carboxylase, ATPase; | 96.62 | |
| 3q2o_A | 389 | Phosphoribosylaminoimidazole carboxylase, ATPase; | 96.61 | |
| 3p2y_A | 381 | Alanine dehydrogenase/pyridine nucleotide transhy; | 96.61 | |
| 3gaz_A | 343 | Alcohol dehydrogenase superfamily protein; oxidore | 96.61 | |
| 3qha_A | 296 | Putative oxidoreductase; seattle structural genomi | 96.6 | |
| 3g0o_A | 303 | 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine | 96.57 | |
| 3pwz_A | 272 | Shikimate dehydrogenase 3; alpha-beta, oxidoreduct | 96.56 | |
| 3gg2_A | 450 | Sugar dehydrogenase, UDP-glucose/GDP-mannose dehyd | 96.56 | |
| 4gx0_A | 565 | TRKA domain protein; membrane protein, ION channel | 96.55 | |
| 1uuf_A | 369 | YAHK, zinc-type alcohol dehydrogenase-like protein | 96.55 | |
| 1vpd_A | 299 | Tartronate semialdehyde reductase; structural geno | 96.53 | |
| 2vn8_A | 375 | Reticulon-4-interacting protein 1; mitochondrion, | 96.53 | |
| 2cf5_A | 357 | Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign | 96.52 | |
| 3pdu_A | 287 | 3-hydroxyisobutyrate dehydrogenase family protein; | 96.52 | |
| 2yv3_A | 331 | Aspartate-semialdehyde dehydrogenase; aspartate pa | 96.52 | |
| 1nvt_A | 287 | Shikimate 5'-dehydrogenase; structural genomics, P | 96.51 | |
| 3cky_A | 301 | 2-hydroxymethyl glutarate dehydrogenase; rossmann | 96.49 | |
| 1gpj_A | 404 | Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro | 96.48 | |
| 1l7d_A | 384 | Nicotinamide nucleotide transhydrogenase, subunit | 96.47 | |
| 4ffl_A | 363 | PYLC; amino acid, biosynthesis of pyrrolysine, iso | 96.47 | |
| 2cdc_A | 366 | Glucose dehydrogenase glucose 1-dehydrogenase, DHG | 96.46 | |
| 3u62_A | 253 | Shikimate dehydrogenase; shikimate pathway, oxidor | 96.45 | |
| 1txg_A | 335 | Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxid | 96.42 | |
| 3fbt_A | 282 | Chorismate mutase and shikimate 5-dehydrogenase fu | 96.41 | |
| 1bg6_A | 359 | N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L | 96.41 | |
| 3pqe_A | 326 | L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas | 96.39 | |
| 3pzr_A | 370 | Aspartate-semialdehyde dehydrogenase; NADP, oxidor | 96.39 | |
| 3o8q_A | 281 | Shikimate 5-dehydrogenase I alpha; structural geno | 96.39 | |
| 2gf2_A | 296 | Hibadh, 3-hydroxyisobutyrate dehydrogenase; struct | 96.39 | |
| 4dio_A | 405 | NAD(P) transhydrogenase subunit alpha PART 1; stru | 96.38 | |
| 1mv8_A | 436 | GMD, GDP-mannose 6-dehydrogenase; rossman fold, do | 96.38 | |
| 1iuk_A | 140 | Hypothetical protein TT1466; structural genomics, | 96.36 | |
| 3krt_A | 456 | Crotonyl COA reductase; structural genomics, prote | 96.36 | |
| 1x13_A | 401 | NAD(P) transhydrogenase subunit alpha; NAD(H)-bind | 96.36 | |
| 3dtt_A | 245 | NADP oxidoreductase; structural genomics, joint ce | 96.36 | |
| 3uw3_A | 377 | Aspartate-semialdehyde dehydrogenase; structural g | 96.34 | |
| 3l6d_A | 306 | Putative oxidoreductase; structural genomics, prot | 96.34 | |
| 1pzg_A | 331 | LDH, lactate dehydrogenase; apicomplexa, APAD, tet | 96.34 | |
| 1piw_A | 360 | Hypothetical zinc-type alcohol dehydrogenase- like | 96.34 | |
| 2duw_A | 145 | Putative COA-binding protein; ligand binding prote | 96.33 | |
| 4huj_A | 220 | Uncharacterized protein; PSI-biology, nysgrc, stru | 96.32 | |
| 4ezb_A | 317 | Uncharacterized conserved protein; structural geno | 96.31 | |
| 2ahr_A | 259 | Putative pyrroline carboxylate reductase; pyrrolin | 96.3 | |
| 3tz6_A | 344 | Aspartate-semialdehyde dehydrogenase; asadh, ASD, | 96.3 | |
| 3vku_A | 326 | L-LDH, L-lactate dehydrogenase; rossmann fold, NAD | 96.29 | |
| 3fbg_A | 346 | Putative arginate lyase; structural genomics, unkn | 96.29 | |
| 3hsk_A | 381 | Aspartate-semialdehyde dehydrogenase; candida albi | 96.26 | |
| 1ur5_A | 309 | Malate dehydrogenase; oxidoreductase, tricarboxyli | 96.26 | |
| 2raf_A | 209 | Putative dinucleotide-binding oxidoreductase; NP_7 | 96.25 | |
| 2hk9_A | 275 | Shikimate dehydrogenase; shikimate pathway, drug d | 96.25 | |
| 1h2b_A | 359 | Alcohol dehydrogenase; oxidoreductase, archaea, hy | 96.25 | |
| 1kjq_A | 391 | GART 2, phosphoribosylglycinamide formyltransferas | 96.24 | |
| 3rui_A | 340 | Ubiquitin-like modifier-activating enzyme ATG7; au | 96.23 | |
| 4gbj_A | 297 | 6-phosphogluconate dehydrogenase NAD-binding; stru | 96.22 | |
| 3m6i_A | 363 | L-arabinitol 4-dehydrogenase; medium chain dehydro | 96.22 | |
| 3tri_A | 280 | Pyrroline-5-carboxylate reductase; amino acid bios | 96.22 | |
| 3two_A | 348 | Mannitol dehydrogenase; cinnamyl-alcohol dehydroge | 96.19 | |
| 2ph5_A | 480 | Homospermidine synthase; alpha-beta protein, struc | 96.19 | |
| 3d1l_A | 266 | Putative NADP oxidoreductase BF3122; structural ge | 96.18 | |
| 3tqh_A | 321 | Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella | 96.15 | |
| 2dq4_A | 343 | L-threonine 3-dehydrogenase; NAD-dependent, oxidor | 96.14 | |
| 3gt0_A | 247 | Pyrroline-5-carboxylate reductase; structural geno | 96.13 | |
| 3dfz_A | 223 | SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase | 96.13 | |
| 3k96_A | 356 | Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA | 96.1 | |
| 4e21_A | 358 | 6-phosphogluconate dehydrogenase (decarboxylating; | 96.1 | |
| 1e3j_A | 352 | NADP(H)-dependent ketose reductase; oxidoreductase | 96.07 | |
| 2uyy_A | 316 | N-PAC protein; long-chain dehydrogenase, cytokine; | 96.06 | |
| 3obb_A | 300 | Probable 3-hydroxyisobutyrate dehydrogenase; struc | 96.05 | |
| 1xa0_A | 328 | Putative NADPH dependent oxidoreductases; structur | 96.03 | |
| 2gcg_A | 330 | Glyoxylate reductase/hydroxypyruvate reductase; NA | 96.02 | |
| 3qsg_A | 312 | NAD-binding phosphogluconate dehydrogenase-like P; | 96.02 | |
| 2dwc_A | 433 | PH0318, 433AA long hypothetical phosphoribosylglyc | 96.0 | |
| 1kyq_A | 274 | Met8P, siroheme biosynthesis protein Met8; homodim | 96.0 | |
| 4dpk_A | 359 | Malonyl-COA/succinyl-COA reductase; dinucleotide b | 95.99 | |
| 4dpl_A | 359 | Malonyl-COA/succinyl-COA reductase; dinucleotide b | 95.99 | |
| 1yb4_A | 295 | Tartronic semialdehyde reductase; structural genom | 95.98 | |
| 4e12_A | 283 | Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1 | 95.97 | |
| 3ggo_A | 314 | Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b | 95.96 | |
| 4f3y_A | 272 | DHPR, dihydrodipicolinate reductase; structural ge | 95.95 | |
| 2d59_A | 144 | Hypothetical protein PH1109; COA binding, structur | 95.94 | |
| 2dph_A | 398 | Formaldehyde dismutase; dismutation of aldehydes, | 95.93 | |
| 1cdo_A | 374 | Alcohol dehydrogenase; oxidoreductase, oxidoreduct | 95.93 | |
| 2cvz_A | 289 | Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; | 95.9 | |
| 3ip1_A | 404 | Alcohol dehydrogenase, zinc-containing; structural | 95.87 | |
| 3h5n_A | 353 | MCCB protein; ubiquitin-activating enzyme, microci | 95.86 | |
| 3hn2_A | 312 | 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, str | 95.85 | |
| 2dpo_A | 319 | L-gulonate 3-dehydrogenase; structural genomics, N | 95.84 | |
| 3ktd_A | 341 | Prephenate dehydrogenase; structural genomics, joi | 95.84 | |
| 1edz_A | 320 | 5,10-methylenetetrahydrofolate dehydrogenase; nucl | 95.82 |
| >3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
Probab=99.95 E-value=2.9e-27 Score=205.49 Aligned_cols=190 Identities=18% Similarity=0.182 Sum_probs=153.1
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCC-HHHHHHHhcCccEEEECCcc-----
Q 021928 99 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASN-KKFLKTALRGVRSIICPSEG----- 172 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d-~~~~~~~~~~~d~Vi~~~~g----- 172 (305)
|+|+||||+|+||++++++|+++|++|++++|++++.... .+++++.+|++| .+++.++++++|+||++++.
T Consensus 1 M~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~--~~~~~~~~D~~d~~~~~~~~~~~~d~vi~~ag~~~~~~ 78 (219)
T 3dqp_A 1 MKIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY--NNVKAVHFDVDWTPEEMAKQLHGMDAIINVSGSGGKSL 78 (219)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCC--TTEEEEECCTTSCHHHHHTTTTTCSEEEECCCCTTSSC
T ss_pred CeEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhc--CCceEEEecccCCHHHHHHHHcCCCEEEECCcCCCCCc
Confidence 5899999999999999999999999999999998765433 579999999999 99999999999999998431
Q ss_pred ---------hHhhhhhhcCCCEEEEEcccccccCCCC----cccccchHHHHHHHHHHHHH-HhCCCCEEEEecCCcccC
Q 021928 173 ---------FISNAGSLKGVQHVILLSQLSVYRGSGG----IQALMKGNARKLAEQDESML-MASGIPYTIIRTGVLQNT 238 (305)
Q Consensus 173 ---------~~~~~a~~~gv~~~V~iSS~~~~~~~~~----~~~~~~~~~~~~~~~aE~~l-~~~gi~~tilRPg~l~~~ 238 (305)
.+.+++++.++++||++||..++.+... ..+.. .+...|..+|+++ +..++++++||||++.+.
T Consensus 79 ~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~~~~e~~~~~~~--~Y~~sK~~~e~~~~~~~~i~~~ilrp~~v~g~ 156 (219)
T 3dqp_A 79 LKVDLYGAVKLMQAAEKAEVKRFILLSTIFSLQPEKWIGAGFDALK--DYYIAKHFADLYLTKETNLDYTIIQPGALTEE 156 (219)
T ss_dssp CCCCCHHHHHHHHHHHHTTCCEEEEECCTTTTCGGGCCSHHHHHTH--HHHHHHHHHHHHHHHSCCCEEEEEEECSEECS
T ss_pred EeEeHHHHHHHHHHHHHhCCCEEEEECcccccCCCccccccccccc--HHHHHHHHHHHHHHhccCCcEEEEeCceEecC
Confidence 2667788889999999999887764322 00111 1233456688888 788999999999998765
Q ss_pred CCCCcceeeecCCCCCCccCHHHHHHHHHHHhhCCCCCCcEEEEecCCcCHHHHHHH
Q 021928 239 PGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVVNGEEKVSDWKKC 295 (305)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~~~~~~~~v~~g~~s~~d~~~~ 295 (305)
...+. +. .++....+++++|+|++++.++.++...+++|++.+++.+++|+.+.
T Consensus 157 ~~~~~-~~--~~~~~~~~i~~~Dva~~i~~~l~~~~~~g~~~~i~~g~~~~~e~~~~ 210 (219)
T 3dqp_A 157 EATGL-ID--INDEVSASNTIGDVADTIKELVMTDHSIGKVISMHNGKTAIKEALES 210 (219)
T ss_dssp CCCSE-EE--ESSSCCCCEEHHHHHHHHHHHHTCGGGTTEEEEEEECSEEHHHHHHT
T ss_pred CCCCc-cc--cCCCcCCcccHHHHHHHHHHHHhCccccCcEEEeCCCCccHHHHHHH
Confidence 44332 22 34666789999999999999999887779999999998888887653
|
| >3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=99.95 E-value=2.2e-27 Score=208.53 Aligned_cols=199 Identities=16% Similarity=0.210 Sum_probs=154.8
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCc-EEeecCCCCHHHHHHHhcCccEEEECCcc-
Q 021928 95 PEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYV-ESMAGDASNKKFLKTALRGVRSIICPSEG- 172 (305)
Q Consensus 95 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v-~~v~~D~~d~~~~~~~~~~~d~Vi~~~~g- 172 (305)
..++|+|+||||+|+||++++++|+++|++|++++|++++..+....++ +++.+|++ +++.+++.++|+|||+++.
T Consensus 18 ~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~Dl~--~~~~~~~~~~D~vi~~ag~~ 95 (236)
T 3e8x_A 18 YFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRERGASDIVVANLE--EDFSHAFASIDAVVFAAGSG 95 (236)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHTTCSEEEECCTT--SCCGGGGTTCSEEEECCCCC
T ss_pred CcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHhCCCceEEEcccH--HHHHHHHcCCCEEEECCCCC
Confidence 3456999999999999999999999999999999999887655444578 99999999 7788999999999998431
Q ss_pred -----------------hHhhhhhhcCCCEEEEEcccccccCCCCcccccchHHHHHHHHHHHHHHhCCCCEEEEecCCc
Q 021928 173 -----------------FISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMASGIPYTIIRTGVL 235 (305)
Q Consensus 173 -----------------~~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~~~~~~aE~~l~~~gi~~tilRPg~l 235 (305)
.+.+++++.++++||++||.++..+...+..... +...|..+|.++++.++++++||||++
T Consensus 96 ~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~~~~~~~~~--Y~~sK~~~e~~~~~~gi~~~~lrpg~v 173 (236)
T 3e8x_A 96 PHTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSSVGTVDPDQGPMNMRH--YLVAKRLADDELKRSSLDYTIVRPGPL 173 (236)
T ss_dssp TTSCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECCTTCSCGGGSCGGGHH--HHHHHHHHHHHHHHSSSEEEEEEECSE
T ss_pred CCCCccccchhhHHHHHHHHHHHHHcCCCEEEEEecCCCCCCCCChhhhhh--HHHHHHHHHHHHHHCCCCEEEEeCCcc
Confidence 1456677889999999999877654311111112 223455688899999999999999998
Q ss_pred ccCCCCCcceeeecCCCCCCccCHHHHHHHHHHHhhCCCCCCcEEEEecCCcCHHHHHHHHH
Q 021928 236 QNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVVNGEEKVSDWKKCFS 297 (305)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~~~~~~~~v~~g~~s~~d~~~~~~ 297 (305)
.+....+........+....+++++|+|++++.++.++...+++|++.+++.++.|+++.++
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~v~~~~~~~~e~~~~i~ 235 (236)
T 3e8x_A 174 SNEESTGKVTVSPHFSEITRSITRHDVAKVIAELVDQQHTIGKTFEVLNGDTPIAKVVEQLG 235 (236)
T ss_dssp ECSCCCSEEEEESSCSCCCCCEEHHHHHHHHHHHTTCGGGTTEEEEEEECSEEHHHHHHTC-
T ss_pred cCCCCCCeEEeccCCCcccCcEeHHHHHHHHHHHhcCccccCCeEEEeCCCcCHHHHHHHhc
Confidence 76554443222333344578999999999999999988788999999999888899887764
|
| >1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=3.2e-26 Score=201.63 Aligned_cols=206 Identities=23% Similarity=0.363 Sum_probs=158.7
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhC--CCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEECCcc--
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVK--RTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG-- 172 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~g-- 172 (305)
++|+|+||||+|+||++++++|+++ |++|++++|++++..+. ..+++++.+|++|.+++.++++++|+|||+++.
T Consensus 3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a~~~~ 81 (253)
T 1xq6_A 3 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI-GGEADVFIGDITDADSINPAFQGIDALVILTSAVP 81 (253)
T ss_dssp SCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHT-TCCTTEEECCTTSHHHHHHHHTTCSEEEECCCCCC
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhc-CCCeeEEEecCCCHHHHHHHHcCCCEEEEeccccc
Confidence 4689999999999999999999999 89999999997665433 457889999999999999999999999987321
Q ss_pred ---------------------------------hHhhhhhhcCCCEEEEEcccccccCCCCcccccchHHHHHHHHHHHH
Q 021928 173 ---------------------------------FISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESM 219 (305)
Q Consensus 173 ---------------------------------~~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~~~~~~aE~~ 219 (305)
.+.+++++.++++||++||.+++.+..+...|........|..+|.+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~y~~sK~~~e~~ 161 (253)
T 1xq6_A 82 KMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGSMGGTNPDHPLNKLGNGNILVWKRKAEQY 161 (253)
T ss_dssp EECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEETTTTCTTCGGGGGGGCCHHHHHHHHHHH
T ss_pred cccccccccccccchhhccccccceeeeHHHHHHHHHHHHHcCCCEEEEEcCccCCCCCCccccccchhHHHHHHHHHHH
Confidence 02345667789999999999887654444444322223346678899
Q ss_pred HHhCCCCEEEEecCCcccCCCCCcceeeecCC----CCCCccCHHHHHHHHHHHhhCCCCCCcEEEEecCC----cCHHH
Q 021928 220 LMASGIPYTIIRTGVLQNTPGGKQGFQFEEGC----AANGSLSKEDAAFICVEALESIPQTGLIFEVVNGE----EKVSD 291 (305)
Q Consensus 220 l~~~gi~~tilRPg~l~~~~~~~~~~~~~~~~----~~~~~Is~~DvA~~iv~~l~~~~~~~~~~~v~~g~----~s~~d 291 (305)
+++.++++++||||.+.+.............. ....+++++|+|++++.+++++...+++|++.+++ .++.|
T Consensus 162 ~~~~~i~~~~vrpg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dva~~~~~~~~~~~~~g~~~~i~~~~~~~~~s~~e 241 (253)
T 1xq6_A 162 LADSGTPYTIIRAGGLLDKEGGVRELLVGKDDELLQTDTKTVPRADVAEVCIQALLFEEAKNKAFDLGSKPEGTSTPTKD 241 (253)
T ss_dssp HHTSSSCEEEEEECEEECSCSSSSCEEEESTTGGGGSSCCEEEHHHHHHHHHHHTTCGGGTTEEEEEEECCTTTSCCCCC
T ss_pred HHhCCCceEEEecceeecCCcchhhhhccCCcCCcCCCCcEEcHHHHHHHHHHHHcCccccCCEEEecCCCcCCCCCHHH
Confidence 99999999999999976543322212211111 12458999999999999998876678999999864 58899
Q ss_pred HHHHHHHhhhhc
Q 021928 292 WKKCFSRLMEKT 303 (305)
Q Consensus 292 ~~~~~~~l~~~~ 303 (305)
+.+.+.++++++
T Consensus 242 ~~~~~~~~~g~~ 253 (253)
T 1xq6_A 242 FKALFSQVTSRF 253 (253)
T ss_dssp HHHHHHTCCCCC
T ss_pred HHHHHHHHhCCC
Confidence 999999988764
|
| >3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.94 E-value=1.3e-26 Score=209.30 Aligned_cols=197 Identities=14% Similarity=0.185 Sum_probs=158.2
Q ss_pred CEEEEEcCCChHHHHHHHHHHhC-CCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEECCcc-----
Q 021928 99 DAVLVTDGDSDIGQMVILSLIVK-RTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG----- 172 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~g----- 172 (305)
|+||||||||+||++++++|++. |++|++++|++++.......+++++.+|+.|.+++.++++++|+|||+++.
T Consensus 1 M~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~~~~~v~~~~~D~~d~~~l~~~~~~~d~vi~~a~~~~~~~ 80 (289)
T 3e48_A 1 MNIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDWRGKVSVRQLDYFNQESMVEAFKGMDTVVFIPSIIHPSF 80 (289)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGGGBTTBEEEECCTTCHHHHHHHTTTCSEEEECCCCCCSHH
T ss_pred CEEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHhhhCCCEEEEcCCCCHHHHHHHHhCCCEEEEeCCCCccch
Confidence 57999999999999999999998 999999999988766555678999999999999999999999999998431
Q ss_pred -------hHhhhhhhcCCCEEEEEcccccccCCCCcccccchHHHHHHHHHHHHHHhCCCCEEEEecCCcccCCC-----
Q 021928 173 -------FISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMASGIPYTIIRTGVLQNTPG----- 240 (305)
Q Consensus 173 -------~~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~~~~~~aE~~l~~~gi~~tilRPg~l~~~~~----- 240 (305)
.+.+++++.++++||++||.+...... +.. ..+...+|..+++.+++|++||||++.+...
T Consensus 81 ~~~~~~~~l~~aa~~~gv~~iv~~Ss~~~~~~~~----~~~---~~~~~~~e~~~~~~g~~~~ilrp~~~~~~~~~~~~~ 153 (289)
T 3e48_A 81 KRIPEVENLVYAAKQSGVAHIIFIGYYADQHNNP----FHM---SPYFGYASRLLSTSGIDYTYVRMAMYMDPLKPYLPE 153 (289)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEEEEESCCSTTCC----STT---HHHHHHHHHHHHHHCCEEEEEEECEESTTHHHHHHH
T ss_pred hhHHHHHHHHHHHHHcCCCEEEEEcccCCCCCCC----Ccc---chhHHHHHHHHHHcCCCEEEEeccccccccHHHHHH
Confidence 256778889999999999976432211 111 1223467888899999999999999765421
Q ss_pred --CCcceeeecCCCCCCccCHHHHHHHHHHHhhCCCCCCcEEEEecCC-cCHHHHHHHHHHhhhhc
Q 021928 241 --GKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVVNGE-EKVSDWKKCFSRLMEKT 303 (305)
Q Consensus 241 --~~~~~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~~~~~~~~v~~g~-~s~~d~~~~~~~l~~~~ 303 (305)
......++.++....+++++|+|++++.++.++...+++|+++ ++ .++.|+++.+.++++++
T Consensus 154 ~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~g~~~~~~-~~~~s~~e~~~~~~~~~g~~ 218 (289)
T 3e48_A 154 LMNMHKLIYPAGDGRINYITRNDIARGVIAIIKNPDTWGKRYLLS-GYSYDMKELAAILSEASGTE 218 (289)
T ss_dssp HHHHTEECCCCTTCEEEEECHHHHHHHHHHHHHCGGGTTCEEEEC-CEEEEHHHHHHHHHHHHTSC
T ss_pred HHHCCCEecCCCCceeeeEEHHHHHHHHHHHHcCCCcCCceEEeC-CCcCCHHHHHHHHHHHHCCc
Confidence 1112233445556779999999999999999887778999999 65 58999999999999875
|
| >2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D | Back alignment and structure |
|---|
Probab=99.94 E-value=4.3e-26 Score=205.33 Aligned_cols=197 Identities=19% Similarity=0.259 Sum_probs=157.9
Q ss_pred CEEEEEcCCChHHHHHHHHHHhC--CCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEECCcc----
Q 021928 99 DAVLVTDGDSDIGQMVILSLIVK--RTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG---- 172 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~g---- 172 (305)
|+||||||+|+||++++++|+++ |++|++++|++++.......+++++.+|+.|.+++.++++++|+|||+++.
T Consensus 1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~~~~~~ 80 (287)
T 2jl1_A 1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLADQGVEVRHGDYNQPESLQKAFAGVSKLLFISGPHYDN 80 (287)
T ss_dssp CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHHHTTCEEEECCTTCHHHHHHHTTTCSEEEECCCCCSCH
T ss_pred CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHhhcCCeEEEeccCCHHHHHHHHhcCCEEEEcCCCCcCc
Confidence 57999999999999999999999 999999999886654433456899999999999999999999999998431
Q ss_pred --------hHhhhhhhcCCCEEEEEcccccccCCCCcccccchHHHHHHHHHHHHHHhCCCCEEEEecCCcccCC-CC--
Q 021928 173 --------FISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMASGIPYTIIRTGVLQNTP-GG-- 241 (305)
Q Consensus 173 --------~~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~~~~~~aE~~l~~~gi~~tilRPg~l~~~~-~~-- 241 (305)
.+.+++++.++++||++||.+++..+ ..| ...|..+|+++++.+++++++||+.+.+.. ..
T Consensus 81 ~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~~~---~~y-----~~~K~~~E~~~~~~~~~~~ilrp~~~~~~~~~~~~ 152 (287)
T 2jl1_A 81 TLLIVQHANVVKAARDAGVKHIAYTGYAFAEESI---IPL-----AHVHLATEYAIRTTNIPYTFLRNALYTDFFVNEGL 152 (287)
T ss_dssp HHHHHHHHHHHHHHHHTTCSEEEEEEETTGGGCC---STH-----HHHHHHHHHHHHHTTCCEEEEEECCBHHHHSSGGG
T ss_pred hHHHHHHHHHHHHHHHcCCCEEEEECCCCCCCCC---Cch-----HHHHHHHHHHHHHcCCCeEEEECCEeccccchhhH
Confidence 14567788899999999999886321 122 223567889999999999999999865432 10
Q ss_pred -----CcceeeecCCCCCCccCHHHHHHHHHHHhhCCCCCCcEEEEecCC-cCHHHHHHHHHHhhhhc
Q 021928 242 -----KQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVVNGE-EKVSDWKKCFSRLMEKT 303 (305)
Q Consensus 242 -----~~~~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~~~~~~~~v~~g~-~s~~d~~~~~~~l~~~~ 303 (305)
.....+..++....+++++|+|++++.+++++...+++|++++++ .++.|+++.+.++.+++
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~ 220 (287)
T 2jl1_A 153 RASTESGAIVTNAGSGIVNSVTRNELALAAATVLTEEGHENKTYNLVSNQPWTFDELAQILSEVSGKK 220 (287)
T ss_dssp HHHHHHTEEEESCTTCCBCCBCHHHHHHHHHHHHTSSSCTTEEEEECCSSCBCHHHHHHHHHHHHSSC
T ss_pred HHHhhCCceeccCCCCccCccCHHHHHHHHHHHhcCCCCCCcEEEecCCCcCCHHHHHHHHHHHHCCc
Confidence 111223345566789999999999999998876678999999874 69999999999998864
|
| >3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=99.94 E-value=7.1e-26 Score=199.33 Aligned_cols=192 Identities=18% Similarity=0.220 Sum_probs=143.2
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCC-CeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEECCcc-
Q 021928 95 PEARDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG- 172 (305)
Q Consensus 95 ~~~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~g- 172 (305)
..++|+||||||+|+||++++++|+++| ++|++++|++++..+....+++++.+|++|.+++.++++++|+||++++.
T Consensus 20 ~~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vv~~a~~~ 99 (236)
T 3qvo_A 20 QGHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPYPTNSQIIMGDVLNHAALKQAMQGQDIVYANLTGE 99 (236)
T ss_dssp --CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSSCCTTEEEEECCTTCHHHHHHHHTTCSEEEEECCST
T ss_pred cCcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhcccccCCcEEEEecCCCHHHHHHHhcCCCEEEEcCCCC
Confidence 3457899999999999999999999999 89999999988766656668999999999999999999999999987442
Q ss_pred -------hHhhhhhhcCCCEEEEEcccccccCCCCcccccc----hHHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCC
Q 021928 173 -------FISNAGSLKGVQHVILLSQLSVYRGSGGIQALMK----GNARKLAEQDESMLMASGIPYTIIRTGVLQNTPGG 241 (305)
Q Consensus 173 -------~~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~----~~~~~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~ 241 (305)
.+.+++++.++++||++||.+++........... ......+..+|+++++.++++++||||++.+....
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~iV~iSS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~vrPg~i~~~~~~ 179 (236)
T 3qvo_A 100 DLDIQANSVIAAMKACDVKRLIFVLSLGIYDEVPGKFVEWNNAVIGEPLKPFRRAADAIEASGLEYTILRPAWLTDEDII 179 (236)
T ss_dssp THHHHHHHHHHHHHHTTCCEEEEECCCCC----------------CGGGHHHHHHHHHHHTSCSEEEEEEECEEECCSCC
T ss_pred chhHHHHHHHHHHHHcCCCEEEEEecceecCCCCcccccchhhcccchHHHHHHHHHHHHHCCCCEEEEeCCcccCCCCc
Confidence 2566778889999999999998865432111100 00111234567888999999999999998765443
Q ss_pred CcceeeecCCCC-CCccCHHHHHHHHHHHhhCCC-CCCcEEEEecCCc
Q 021928 242 KQGFQFEEGCAA-NGSLSKEDAAFICVEALESIP-QTGLIFEVVNGEE 287 (305)
Q Consensus 242 ~~~~~~~~~~~~-~~~Is~~DvA~~iv~~l~~~~-~~~~~~~v~~g~~ 287 (305)
.... ...+... ..+++++|||++++.++.++. ..++.|+++++..
T Consensus 180 ~~~~-~~~~~~~~~~~i~~~DvA~~i~~ll~~~~~~~g~~~~i~~~~~ 226 (236)
T 3qvo_A 180 DYEL-TSRNEPFKGTIVSRKSVAALITDIIDKPEKHIGENIGINQPGT 226 (236)
T ss_dssp CCEE-ECTTSCCSCSEEEHHHHHHHHHHHHHSTTTTTTEEEEEECSSC
T ss_pred ceEE-eccCCCCCCcEECHHHHHHHHHHHHcCcccccCeeEEecCCCC
Confidence 2211 1122222 357999999999999999887 6799999998764
|
| >1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=5.8e-25 Score=187.93 Aligned_cols=185 Identities=13% Similarity=0.123 Sum_probs=144.4
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEECCcc------
Q 021928 99 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG------ 172 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~g------ 172 (305)
|+|+||||+|+||++++++|+++|++|++++|++++.......+++++.+|+.|.+++.++++++|+|||+++.
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~~~~~~~ 83 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAADVDKTVAGQDAVIVLLGTRNDLSP 83 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSSCCCSEEEESCTTSHHHHHHHHTTCSEEEECCCCTTCCSC
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhcccccCCceEEEEecCCCHHHHHHHHcCCCEEEECccCCCCCCc
Confidence 79999999999999999999999999999999987654433567999999999999999999999999988431
Q ss_pred ---------hHhhhhhhcCCCEEEEEcccccccCCCCcc-cccchHHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCC
Q 021928 173 ---------FISNAGSLKGVQHVILLSQLSVYRGSGGIQ-ALMKGNARKLAEQDESMLMASGIPYTIIRTGVLQNTPGGK 242 (305)
Q Consensus 173 ---------~~~~~a~~~gv~~~V~iSS~~~~~~~~~~~-~~~~~~~~~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~ 242 (305)
.+.+++++.++++||++||.+++....... ... .+...|..+|.++++.+++++++||+.+.+.+...
T Consensus 84 ~~~n~~~~~~~~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~--~y~~~K~~~e~~~~~~~i~~~~lrp~~~~~~~~~~ 161 (206)
T 1hdo_A 84 TTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTKVPPRLQ--AVTDDHIRMHKVLRESGLKYVAVMPPHIGDQPLTG 161 (206)
T ss_dssp CCHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCTTCSCGGGH--HHHHHHHHHHHHHHHTCSEEEEECCSEEECCCCCS
T ss_pred cchHHHHHHHHHHHHHHhCCCeEEEEeeeeeccCcccccccch--hHHHHHHHHHHHHHhCCCCEEEEeCCcccCCCCCc
Confidence 145567778999999999998876543211 111 12334566788899999999999999975443322
Q ss_pred cceeeecCCCC-CCccCHHHHHHHHHHHhhCCCCCCcEEEEecCC
Q 021928 243 QGFQFEEGCAA-NGSLSKEDAAFICVEALESIPQTGLIFEVVNGE 286 (305)
Q Consensus 243 ~~~~~~~~~~~-~~~Is~~DvA~~iv~~l~~~~~~~~~~~v~~g~ 286 (305)
. +........ ..+++++|+|++++.+++++...+++|++.++.
T Consensus 162 ~-~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~g~ 205 (206)
T 1hdo_A 162 A-YTVTLDGRGPSRVISKHDLGHFMLRCLTTDEYDGHSTYPSHQY 205 (206)
T ss_dssp C-CEEESSSCSSCSEEEHHHHHHHHHHTTSCSTTTTCEEEEECCC
T ss_pred c-eEecccCCCCCCccCHHHHHHHHHHHhcCccccccceeeeccc
Confidence 2 111112222 588999999999999999887789999999875
|
| >3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=1.1e-25 Score=208.34 Aligned_cols=207 Identities=12% Similarity=0.069 Sum_probs=156.2
Q ss_pred CcCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhc-------C----CCcEEeecCCCCHHHHHHHhcC
Q 021928 94 FPEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF-------G----TYVESMAGDASNKKFLKTALRG 162 (305)
Q Consensus 94 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-------~----~~v~~v~~D~~d~~~~~~~~~~ 162 (305)
+..++|+||||||+||||++++++|+++|++|++++|+........ . .+++++.+|+.|.+++.+++++
T Consensus 21 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~ 100 (351)
T 3ruf_A 21 LIFSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMKG 100 (351)
T ss_dssp HHHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTTT
T ss_pred CCCCCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhcC
Confidence 3345799999999999999999999999999999999764321111 0 5789999999999999999999
Q ss_pred ccEEEECCcc----------------------hHhhhhhhcCCCEEEEEcccccccCCCCc--------ccccchHHHHH
Q 021928 163 VRSIICPSEG----------------------FISNAGSLKGVQHVILLSQLSVYRGSGGI--------QALMKGNARKL 212 (305)
Q Consensus 163 ~d~Vi~~~~g----------------------~~~~~a~~~gv~~~V~iSS~~~~~~~~~~--------~~~~~~~~~~~ 212 (305)
+|+|||+++. .+.+++++.++++|||+||.++|...... .+...| ...
T Consensus 101 ~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y--~~s 178 (351)
T 3ruf_A 101 VDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQSFTYAASSSTYGDHPALPKVEENIGNPLSPY--AVT 178 (351)
T ss_dssp CSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSHH--HHH
T ss_pred CCEEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEecHHhcCCCCCCCCccCCCCCCCChh--HHH
Confidence 9999998431 14566788899999999999998643221 111122 223
Q ss_pred HHHHHHHHH----hCCCCEEEEecCCcccCCCC------------------Ccc-eeeecCCCCCCccCHHHHHHHHHHH
Q 021928 213 AEQDESMLM----ASGIPYTIIRTGVLQNTPGG------------------KQG-FQFEEGCAANGSLSKEDAAFICVEA 269 (305)
Q Consensus 213 ~~~aE~~l~----~~gi~~tilRPg~l~~~~~~------------------~~~-~~~~~~~~~~~~Is~~DvA~~iv~~ 269 (305)
|..+|.+++ +.+++++++||+.+++.... +.. ..++.++....+|+++|+|++++.+
T Consensus 179 K~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~ 258 (351)
T 3ruf_A 179 KYVNEIYAQVYARTYGFKTIGLRYFNVFGRRQDPNGAYAAVIPKWTAAMLKGDDVYINGDGETSRDFCYIDNVIQMNILS 258 (351)
T ss_dssp HHHHHHHHHHHHHHHCCCCEEEEECSEESTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCEEEEeeCceeCcCCCCCcchhhHHHHHHHHHHcCCCcEEeCCCCeEEeeEEHHHHHHHHHHH
Confidence 444565554 46999999999996543211 111 2223455667899999999999999
Q ss_pred hhC-CCCCCcEEEEecCC-cCHHHHHHHHHHhhhh
Q 021928 270 LES-IPQTGLIFEVVNGE-EKVSDWKKCFSRLMEK 302 (305)
Q Consensus 270 l~~-~~~~~~~~~v~~g~-~s~~d~~~~~~~l~~~ 302 (305)
+.. +...+++||+++++ .++.|+++.+.++.+.
T Consensus 259 ~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~ 293 (351)
T 3ruf_A 259 ALAKDSAKDNIYNVAVGDRTTLNELSGYIYDELNL 293 (351)
T ss_dssp HTCCGGGCSEEEEESCSCCEEHHHHHHHHHHHHHT
T ss_pred HhhccccCCCEEEeCCCCcccHHHHHHHHHHHhCc
Confidence 987 45678999999876 5899999999999987
|
| >2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.94 E-value=1.5e-25 Score=206.42 Aligned_cols=202 Identities=12% Similarity=0.069 Sum_probs=152.6
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEECCcc----
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG---- 172 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~g---- 172 (305)
++|+||||||+|+||++++++|+++|++|++++|++.+.......+++++.+|+.|.+++.++++++|+|||+++.
T Consensus 12 ~~M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~a~~~~~~ 91 (342)
T 2x4g_A 12 AHVKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRLAYLEPECRVAEMLDHAGLERALRGLDGVIFSAGYYPSR 91 (342)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGGGGGCCEEEECCTTCHHHHHHHTTTCSEEEEC-------
T ss_pred cCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhhhccCCeEEEEecCCCHHHHHHHHcCCCEEEECCccCcCC
Confidence 4579999999999999999999999999999999876654333336899999999999999999999999998431
Q ss_pred ----------------hHhhhhhhcCCCEEEEEcccccccCCCC---------ccc----ccchHHHHHHHHHHHHHHh-
Q 021928 173 ----------------FISNAGSLKGVQHVILLSQLSVYRGSGG---------IQA----LMKGNARKLAEQDESMLMA- 222 (305)
Q Consensus 173 ----------------~~~~~a~~~gv~~~V~iSS~~~~~~~~~---------~~~----~~~~~~~~~~~~aE~~l~~- 222 (305)
.+.+++.+.++++||++||.++|..... ..+ ... +...|..+|.+++.
T Consensus 92 ~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~E~~~~~p~~~~~~~--Y~~sK~~~e~~~~~~ 169 (342)
T 2x4g_A 92 PRRWQEEVASALGQTNPFYAACLQARVPRILYVGSAYAMPRHPQGLPGHEGLFYDSLPSGKSS--YVLCKWALDEQAREQ 169 (342)
T ss_dssp -----CHHHHHHHHHHHHHHHHHHHTCSCEEEECCGGGSCCCTTSSCBCTTCCCSSCCTTSCH--HHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHhhCcCCCCCCCCCCCCCCccccccCh--HHHHHHHHHHHHHHH
Confidence 1455677789999999999998864332 001 111 22234456666553
Q ss_pred --CCCCEEEEecCCcccCCC-C------------CcceeeecCCCCCCccCHHHHHHHHHHHhhCCCCCCcEEEEecCCc
Q 021928 223 --SGIPYTIIRTGVLQNTPG-G------------KQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVVNGEE 287 (305)
Q Consensus 223 --~gi~~tilRPg~l~~~~~-~------------~~~~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~~~~~~~~v~~g~~ 287 (305)
.++++++|||+.+.+... . +....+ ++....+++++|+|++++.+++++.. +++|++++++.
T Consensus 170 ~~~g~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~v~Dva~~~~~~~~~~~~-g~~~~v~~~~~ 246 (342)
T 2x4g_A 170 ARNGLPVVIGIPGMVLGELDIGPTTGRVITAIGNGEMTHY--VAGQRNVIDAAEAGRGLLMALERGRI-GERYLLTGHNL 246 (342)
T ss_dssp HHTTCCEEEEEECEEECSCCSSCSTTHHHHHHHTTCCCEE--ECCEEEEEEHHHHHHHHHHHHHHSCT-TCEEEECCEEE
T ss_pred hhcCCcEEEEeCCceECCCCccccHHHHHHHHHcCCCccc--cCCCcceeeHHHHHHHHHHHHhCCCC-CceEEEcCCcc
Confidence 399999999999654321 1 111111 33446789999999999999987665 88999998778
Q ss_pred CHHHHHHHHHHhhhhc
Q 021928 288 KVSDWKKCFSRLMEKT 303 (305)
Q Consensus 288 s~~d~~~~~~~l~~~~ 303 (305)
++.|+++.+.++.+.+
T Consensus 247 s~~e~~~~i~~~~g~~ 262 (342)
T 2x4g_A 247 EMADLTRRIAELLGQP 262 (342)
T ss_dssp EHHHHHHHHHHHHTCC
T ss_pred cHHHHHHHHHHHhCCC
Confidence 8999999999998765
|
| >3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} | Back alignment and structure |
|---|
Probab=99.94 E-value=4.3e-25 Score=201.47 Aligned_cols=201 Identities=15% Similarity=0.104 Sum_probs=153.3
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEECCcc----
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG---- 172 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~g---- 172 (305)
|+|+||||||+|+||++++++|+++|++|++++|++.... +. +++++.+|+. .+++.++++++|+|||+++.
T Consensus 1 M~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~--~~-~~~~~~~Dl~-~~~~~~~~~~~d~Vih~a~~~~~~ 76 (311)
T 3m2p_A 1 MSLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKA--IN-DYEYRVSDYT-LEDLINQLNDVDAVVHLAATRGSQ 76 (311)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC--------CCEEEECCCC-HHHHHHHTTTCSEEEECCCCCCSS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc--CC-ceEEEEcccc-HHHHHHhhcCCCEEEEccccCCCC
Confidence 4689999999999999999999999999999999943332 22 6899999999 99999999999999998331
Q ss_pred --------------hHhhhhhhcCCCEEEEEcccccccCCCC--------cccccchHHHHHHHHHHHHHHh----CCCC
Q 021928 173 --------------FISNAGSLKGVQHVILLSQLSVYRGSGG--------IQALMKGNARKLAEQDESMLMA----SGIP 226 (305)
Q Consensus 173 --------------~~~~~a~~~gv~~~V~iSS~~~~~~~~~--------~~~~~~~~~~~~~~~aE~~l~~----~gi~ 226 (305)
.+.+++++.++++||++||..+|..... ..+... +...|..+|+++++ .+++
T Consensus 77 ~~~~~~~~n~~~~~~ll~a~~~~~~~r~v~~SS~~vyg~~~~~~~~E~~~~~p~~~--Y~~sK~~~E~~~~~~~~~~g~~ 154 (311)
T 3m2p_A 77 GKISEFHDNEILTQNLYDACYENNISNIVYASTISAYSDETSLPWNEKELPLPDLM--YGVSKLACEHIGNIYSRKKGLC 154 (311)
T ss_dssp SCGGGTHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCCGGGCSBCTTSCCCCSSH--HHHHHHHHHHHHHHHHHHSCCE
T ss_pred ChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHhCCCCCCCCCCCCCCCCCch--hHHHHHHHHHHHHHHHHHcCCC
Confidence 1566788889999999999988864321 111112 22234456666654 7999
Q ss_pred EEEEecCCcccCCCC--------------Ccceee-ecCCCCCCccCHHHHHHHHHHHhhCCCCCCcEEEEecCC-cCHH
Q 021928 227 YTIIRTGVLQNTPGG--------------KQGFQF-EEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVVNGE-EKVS 290 (305)
Q Consensus 227 ~tilRPg~l~~~~~~--------------~~~~~~-~~~~~~~~~Is~~DvA~~iv~~l~~~~~~~~~~~v~~g~-~s~~ 290 (305)
++++||+.+.+.... +....+ +.++....+++++|+|++++.+++++. .+++|++++++ .++.
T Consensus 155 ~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~v~Dva~a~~~~~~~~~-~~~~~~i~~~~~~s~~ 233 (311)
T 3m2p_A 155 IKNLRFAHLYGFNEKNNYMINRFFRQAFHGEQLTLHANSVAKREFLYAKDAAKSVIYALKQEK-VSGTFNIGSGDALTNY 233 (311)
T ss_dssp EEEEEECEEECSCC--CCHHHHHHHHHHTCCCEEESSBCCCCEEEEEHHHHHHHHHHHTTCTT-CCEEEEECCSCEECHH
T ss_pred EEEEeeCceeCcCCCCCCHHHHHHHHHHcCCCeEEecCCCeEEceEEHHHHHHHHHHHHhcCC-CCCeEEeCCCCcccHH
Confidence 999999996643221 222222 445666789999999999999998876 68999999876 5999
Q ss_pred HHHHHHHHhhhhcC
Q 021928 291 DWKKCFSRLMEKTG 304 (305)
Q Consensus 291 d~~~~~~~l~~~~~ 304 (305)
|+++.+.+..+.+.
T Consensus 234 e~~~~i~~~~g~~~ 247 (311)
T 3m2p_A 234 EVANTINNAFGNKD 247 (311)
T ss_dssp HHHHHHHHHTTCTT
T ss_pred HHHHHHHHHhCCCC
Confidence 99999999988753
|
| >3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=99.94 E-value=1.6e-25 Score=209.04 Aligned_cols=207 Identities=14% Similarity=0.132 Sum_probs=156.9
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhC-CCeEEEEEcCcchhhhhcC-CCcEEeecCCC-CHHHHHHHhcCccEEEECCcc
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVK-RTRIKALVKDKRNAMESFG-TYVESMAGDAS-NKKFLKTALRGVRSIICPSEG 172 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~R~~~~~~~~~~-~~v~~v~~D~~-d~~~~~~~~~~~d~Vi~~~~g 172 (305)
.++|+||||||+|+||++|+++|+++ |++|++++|++++...... .+++++.+|+. |.+.+.++++++|+|||+++.
T Consensus 22 m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~~d~~~~~~~~~~~d~Vih~A~~ 101 (372)
T 3slg_A 22 MKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVKHERMHFFEGDITINKEWVEYHVKKCDVILPLVAI 101 (372)
T ss_dssp -CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGGSTTEEEEECCTTTCHHHHHHHHHHCSEEEECBCC
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhccCCCeEEEeCccCCCHHHHHHHhccCCEEEEcCcc
Confidence 35689999999999999999999998 9999999999876544433 57999999999 999999999999999997320
Q ss_pred ----------------------hHhhhhhhcCCCEEEEEcccccccCCCCcc-----------cc-cc-hHHHHHHHHHH
Q 021928 173 ----------------------FISNAGSLKGVQHVILLSQLSVYRGSGGIQ-----------AL-MK-GNARKLAEQDE 217 (305)
Q Consensus 173 ----------------------~~~~~a~~~gv~~~V~iSS~~~~~~~~~~~-----------~~-~~-~~~~~~~~~aE 217 (305)
.+.+++++.+ ++|||+||.++|....... +. .+ ..+...|..+|
T Consensus 102 ~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~p~~~p~~~Y~~sK~~~E 180 (372)
T 3slg_A 102 ATPATYVKQPLRVFELDFEANLPIVRSAVKYG-KHLVFPSTSEVYGMCADEQFDPDASALTYGPINKPRWIYACSKQLMD 180 (372)
T ss_dssp CCHHHHHHCHHHHHHHHTTTTHHHHHHHHHHT-CEEEEECCGGGGBSCCCSSBCTTTCCEEECCTTCTTHHHHHHHHHHH
T ss_pred ccHHHHhhCHHHHHHHHHHHHHHHHHHHHHhC-CcEEEeCcHHHhCCCCCCCCCccccccccCCCCCCCCcHHHHHHHHH
Confidence 1456677788 9999999998886422110 00 00 01233455677
Q ss_pred HHHHhC---CCCEEEEecCCcccCCC----------------------CCcceee-ecCCCCCCccCHHHHHHHHHHHhh
Q 021928 218 SMLMAS---GIPYTIIRTGVLQNTPG----------------------GKQGFQF-EEGCAANGSLSKEDAAFICVEALE 271 (305)
Q Consensus 218 ~~l~~~---gi~~tilRPg~l~~~~~----------------------~~~~~~~-~~~~~~~~~Is~~DvA~~iv~~l~ 271 (305)
.+++.. ++++++|||+.+++... .+..+.+ +.++....+|+++|+|++++.+++
T Consensus 181 ~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~ 260 (372)
T 3slg_A 181 RVIWGYGMEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGENISLVDGGSQKRAFTYVDDGISALMKIIE 260 (372)
T ss_dssp HHHHHHHTTTCEEEEEEECSEECSSCCCTTCSBSCSCHHHHHHHHHHHHTCCEEEGGGGCCEEECEEHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCCEEEEccccccCCCcccccccccccchHHHHHHHHHHcCCCcEEeCCCceEEEEEEHHHHHHHHHHHHh
Confidence 777654 99999999999654321 1112222 334555789999999999999999
Q ss_pred CCC--CCCcEEEEec-C-CcCHHHHHHHHHHhhhhc
Q 021928 272 SIP--QTGLIFEVVN-G-EEKVSDWKKCFSRLMEKT 303 (305)
Q Consensus 272 ~~~--~~~~~~~v~~-g-~~s~~d~~~~~~~l~~~~ 303 (305)
++. ..+++|++++ + ..++.|+++.+.++.+++
T Consensus 261 ~~~~~~~~~~~ni~~~~~~~s~~e~~~~i~~~~g~~ 296 (372)
T 3slg_A 261 NSNGVATGKIYNIGNPNNNFSVRELANKMLELAAEF 296 (372)
T ss_dssp CGGGTTTTEEEEECCTTCEEEHHHHHHHHHHHHHHC
T ss_pred cccCcCCCceEEeCCCCCCccHHHHHHHHHHHhCCC
Confidence 876 5789999999 4 469999999999998875
|
| >4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=2.3e-25 Score=206.04 Aligned_cols=204 Identities=16% Similarity=0.144 Sum_probs=152.0
Q ss_pred ccCcCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEECCc
Q 021928 92 DEFPEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE 171 (305)
Q Consensus 92 ~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~ 171 (305)
.+.+.++|+||||||+||||++++++|+++|++|++++|++.. .+++++.+|+.|.+++.++++++|+|||+++
T Consensus 13 ~~~~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~------~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A~ 86 (347)
T 4id9_A 13 GLVPRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG------TGGEEVVGSLEDGQALSDAIMGVSAVLHLGA 86 (347)
T ss_dssp --------CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS------SCCSEEESCTTCHHHHHHHHTTCSEEEECCC
T ss_pred cccccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC------CCccEEecCcCCHHHHHHHHhCCCEEEECCc
Confidence 3445567999999999999999999999999999999998754 4689999999999999999999999999843
Q ss_pred c--------------------hHhhhhhhcCCCEEEEEcccccccCC--C--------CcccccchHHHHHHHHHHHHHH
Q 021928 172 G--------------------FISNAGSLKGVQHVILLSQLSVYRGS--G--------GIQALMKGNARKLAEQDESMLM 221 (305)
Q Consensus 172 g--------------------~~~~~a~~~gv~~~V~iSS~~~~~~~--~--------~~~~~~~~~~~~~~~~aE~~l~ 221 (305)
. .+.+++++.++++||++||.++|... . ...+...| ...|..+|.+++
T Consensus 87 ~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~V~~SS~~vyg~~~~~~~~~~E~~~~~~~~~Y--~~sK~~~E~~~~ 164 (347)
T 4id9_A 87 FMSWAPADRDRMFAVNVEGTRRLLDAASAAGVRRFVFASSGEVYPENRPEFLPVTEDHPLCPNSPY--GLTKLLGEELVR 164 (347)
T ss_dssp CCCSSGGGHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGTTTTSCSSSSBCTTSCCCCCSHH--HHHHHHHHHHHH
T ss_pred ccCcchhhHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHHhCCCCCCCCCcCCCCCCCCCChH--HHHHHHHHHHHH
Confidence 1 14566778899999999999988641 1 11111122 223445566554
Q ss_pred ----hCCCCEEEEecCCcc-------------cCC-------------------------CCCcc-eeeecCCCCCCc--
Q 021928 222 ----ASGIPYTIIRTGVLQ-------------NTP-------------------------GGKQG-FQFEEGCAANGS-- 256 (305)
Q Consensus 222 ----~~gi~~tilRPg~l~-------------~~~-------------------------~~~~~-~~~~~~~~~~~~-- 256 (305)
+.++++++|||+.+. +.. ..+.. ..++.+.....+
T Consensus 165 ~~~~~~~~~~~ilRp~~v~~~~~~~~~~~~~~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 244 (347)
T 4id9_A 165 FHQRSGAMETVILRFSHTQDATELLDEDSFFSGPRFFLRPRIHQQQNFGNAAIAELLQSRDIGEPSHILARNENGRPFRM 244 (347)
T ss_dssp HHHHHSSSEEEEEEECEEECGGGTTCTTSSSHHHHHBHHHHHHHHHHHTCHHHHHHHHHHCCSSCCEEEEECTTCCBCEE
T ss_pred HHHHhcCCceEEEccceEeecccccccccccCCCCcccccccccccccchhHHHHHHHHHHcCCCeEEeCCCCcccCCcc
Confidence 579999999999865 110 01111 233455556677
Q ss_pred --cCHHHHHHHHHHHhhCCCCCCcEEEEecCC-cCHHHHHHHHHHhhhhc
Q 021928 257 --LSKEDAAFICVEALESIPQTGLIFEVVNGE-EKVSDWKKCFSRLMEKT 303 (305)
Q Consensus 257 --Is~~DvA~~iv~~l~~~~~~~~~~~v~~g~-~s~~d~~~~~~~l~~~~ 303 (305)
++++|+|++++.+++++...+++|++++++ .++.|+++.+.+..+.+
T Consensus 245 ~~i~v~Dva~ai~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~ 294 (347)
T 4id9_A 245 HITDTRDMVAGILLALDHPEAAGGTFNLGADEPADFAALLPKIAALTGLP 294 (347)
T ss_dssp CEEEHHHHHHHHHHHHHCGGGTTEEEEESCSSCEEHHHHHHHHHHHHCCC
T ss_pred CcEeHHHHHHHHHHHhcCcccCCCeEEECCCCcccHHHHHHHHHHHhCCC
Confidence 999999999999999886678999999876 58999999999998764
|
| >2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=1.2e-25 Score=202.00 Aligned_cols=196 Identities=21% Similarity=0.266 Sum_probs=156.5
Q ss_pred EEEEEcCCChHHHHHHHHHHhC--CCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEECCcc-----
Q 021928 100 AVLVTDGDSDIGQMVILSLIVK--RTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG----- 172 (305)
Q Consensus 100 ~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~g----- 172 (305)
+||||||+|+||++++++|+++ |++|++++|++++.......+++++.+|+.|.+++.++++++|+|||+++.
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a~~~~~~~ 80 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAAQGITVRQADYGDEAALTSALQGVEKLLLISSSEVGQR 80 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHHHTTCEEEECCTTCHHHHHHHTTTCSEEEECC-------
T ss_pred CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhhcCCCeEEEcCCCCHHHHHHHHhCCCEEEEeCCCCchHH
Confidence 5899999999999999999998 999999999887654333456899999999999999999999999998431
Q ss_pred -----hHhhhhhhcCCCEEEEEcccccccCCCCcccccchHHHHHHHHHHHHHHhCCCCEEEEecCCcccCCC-------
Q 021928 173 -----FISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMASGIPYTIIRTGVLQNTPG------- 240 (305)
Q Consensus 173 -----~~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~~~~~~aE~~l~~~gi~~tilRPg~l~~~~~------- 240 (305)
.+.+++++.++++||++||.+++.. +..|. ..|..+|+++++.+++++++||+++.+...
T Consensus 81 ~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~~---~~~y~-----~sK~~~e~~~~~~~~~~~ilrp~~~~~~~~~~~~~~~ 152 (286)
T 2zcu_A 81 APQHRNVINAAKAAGVKFIAYTSLLHADTS---PLGLA-----DEHIETEKMLADSGIVYTLLRNGWYSENYLASAPAAL 152 (286)
T ss_dssp -CHHHHHHHHHHHHTCCEEEEEEETTTTTC---CSTTH-----HHHHHHHHHHHHHCSEEEEEEECCBHHHHHTTHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEEECCCCCCCC---cchhH-----HHHHHHHHHHHHcCCCeEEEeChHHhhhhHHHhHHhh
Confidence 2566778889999999999988732 12232 235568888989999999999998654311
Q ss_pred CCcceeeecCCCCCCccCHHHHHHHHHHHhhCCCCCCcEEEEecCC-cCHHHHHHHHHHhhhhc
Q 021928 241 GKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVVNGE-EKVSDWKKCFSRLMEKT 303 (305)
Q Consensus 241 ~~~~~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~~~~~~~~v~~g~-~s~~d~~~~~~~l~~~~ 303 (305)
......++.++....+++++|+|++++.++.++...+++|++++++ .++.|+++.+.++.+++
T Consensus 153 ~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~ 216 (286)
T 2zcu_A 153 EHGVFIGAAGDGKIASATRADYAAAAARVISEAGHEGKVYELAGDSAWTLTQLAAELTKQSGKQ 216 (286)
T ss_dssp HHTEEEESCTTCCBCCBCHHHHHHHHHHHHHSSSCTTCEEEECCSSCBCHHHHHHHHHHHHSSC
T ss_pred cCCceeccCCCCccccccHHHHHHHHHHHhcCCCCCCceEEEeCCCcCCHHHHHHHHHHHHCCC
Confidence 0112233445566789999999999999999876678999999874 69999999999998864
|
| >3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} | Back alignment and structure |
|---|
Probab=99.94 E-value=4.6e-25 Score=198.65 Aligned_cols=198 Identities=13% Similarity=0.105 Sum_probs=154.5
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEECCcc----
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG---- 172 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~g---- 172 (305)
++|+|||||| |+||++++++|+++|++|++++|++.+.......+++++.+|+.|.+ +.++|+|||+++.
T Consensus 4 m~~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~-----~~~~d~vi~~a~~~~~~ 77 (286)
T 3ius_A 4 MTGTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRASGAEPLLWPGEEPS-----LDGVTHLLISTAPDSGG 77 (286)
T ss_dssp -CCEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHHTTEEEEESSSSCCC-----CTTCCEEEECCCCBTTB
T ss_pred CcCcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhhCCCeEEEecccccc-----cCCCCEEEECCCccccc
Confidence 5689999998 99999999999999999999999987765544467999999999943 8899999998431
Q ss_pred -----hHhhhhhh--cCCCEEEEEcccccccCCCCc--------ccccchHHHHHHHHHHHHHHhC-CCCEEEEecCCcc
Q 021928 173 -----FISNAGSL--KGVQHVILLSQLSVYRGSGGI--------QALMKGNARKLAEQDESMLMAS-GIPYTIIRTGVLQ 236 (305)
Q Consensus 173 -----~~~~~a~~--~gv~~~V~iSS~~~~~~~~~~--------~~~~~~~~~~~~~~aE~~l~~~-gi~~tilRPg~l~ 236 (305)
.+.+++++ .++++||++||.++|...... .+.. .+...|..+|+++++. +++++++||+.+.
T Consensus 78 ~~~~~~l~~a~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~~~~~p~~--~Y~~sK~~~E~~~~~~~~~~~~ilRp~~v~ 155 (286)
T 3ius_A 78 DPVLAALGDQIAARAAQFRWVGYLSTTAVYGDHDGAWVDETTPLTPTA--ARGRWRVMAEQQWQAVPNLPLHVFRLAGIY 155 (286)
T ss_dssp CHHHHHHHHHHHHTGGGCSEEEEEEEGGGGCCCTTCEECTTSCCCCCS--HHHHHHHHHHHHHHHSTTCCEEEEEECEEE
T ss_pred cHHHHHHHHHHHhhcCCceEEEEeecceecCCCCCCCcCCCCCCCCCC--HHHHHHHHHHHHHHhhcCCCEEEEeccceE
Confidence 25566766 789999999999988643221 1111 1233466788998887 9999999999965
Q ss_pred cCCC-------CCcceeeecCCCCCCccCHHHHHHHHHHHhhCCCCCCcEEEEecCC-cCHHHHHHHHHHhhhhc
Q 021928 237 NTPG-------GKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVVNGE-EKVSDWKKCFSRLMEKT 303 (305)
Q Consensus 237 ~~~~-------~~~~~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~~~~~~~~v~~g~-~s~~d~~~~~~~l~~~~ 303 (305)
+... .+....+..++....+|+++|+|++++.+++++. .+++|++++++ .++.|+++.+.+..+.+
T Consensus 156 G~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~-~g~~~~i~~~~~~s~~e~~~~i~~~~g~~ 229 (286)
T 3ius_A 156 GPGRGPFSKLGKGGIRRIIKPGQVFSRIHVEDIAQVLAASMARPD-PGAVYNVCDDEPVPPQDVIAYAAELQGLP 229 (286)
T ss_dssp BTTBSSSTTSSSSCCCEEECTTCCBCEEEHHHHHHHHHHHHHSCC-TTCEEEECCSCCBCHHHHHHHHHHHHTCC
T ss_pred CCCchHHHHHhcCCccccCCCCcccceEEHHHHHHHHHHHHhCCC-CCCEEEEeCCCCccHHHHHHHHHHHcCCC
Confidence 4321 2222333344556789999999999999999877 67899999876 69999999999998865
|
| >3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.93 E-value=5.4e-25 Score=191.65 Aligned_cols=187 Identities=13% Similarity=0.116 Sum_probs=139.8
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEECCcc-----
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG----- 172 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~g----- 172 (305)
+|+||||||+|+||++++++|+++|++|++++|++++... ...+++++.+|+.|.+++.++++++|+|||+++.
T Consensus 4 m~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a~~~~~~~ 82 (227)
T 3dhn_A 4 VKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKI-ENEHLKVKKADVSSLDEVCEVCKGADAVISAFNPGWNNP 82 (227)
T ss_dssp CCEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCC-CCTTEEEECCCTTCHHHHHHHHTTCSEEEECCCC-----
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchh-ccCceEEEEecCCCHHHHHHHhcCCCEEEEeCcCCCCCh
Confidence 5899999999999999999999999999999999876543 2367999999999999999999999999998432
Q ss_pred -----------hHhhhhhhcCCCEEEEEcccccccCCCC-------cccccchHHHHHHHHHH---HHHH-hCCCCEEEE
Q 021928 173 -----------FISNAGSLKGVQHVILLSQLSVYRGSGG-------IQALMKGNARKLAEQDE---SMLM-ASGIPYTII 230 (305)
Q Consensus 173 -----------~~~~~a~~~gv~~~V~iSS~~~~~~~~~-------~~~~~~~~~~~~~~~aE---~~l~-~~gi~~til 230 (305)
.+.+++++.++++||++||.+++..... ..+...|.. .|..+| +.+. +.+++++++
T Consensus 83 ~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~p~~~Y~~--sK~~~e~~~~~~~~~~~~~~~il 160 (227)
T 3dhn_A 83 DIYDETIKVYLTIIDGVKKAGVNRFLMVGGAGSLFIAPGLRLMDSGEVPENILPG--VKALGEFYLNFLMKEKEIDWVFF 160 (227)
T ss_dssp -CCSHHHHHHHHHHHHHHHTTCSEEEEECCSTTSEEETTEEGGGTTCSCGGGHHH--HHHHHHHHHHTGGGCCSSEEEEE
T ss_pred hHHHHHHHHHHHHHHHHHHhCCCEEEEeCChhhccCCCCCccccCCcchHHHHHH--HHHHHHHHHHHHhhccCccEEEE
Confidence 1556778889999999999887643211 111112222 233344 3344 579999999
Q ss_pred ecCCcccCCCCCcceeee-----cCCCCCCccCHHHHHHHHHHHhhCCCCCCcEEEEecCCc
Q 021928 231 RTGVLQNTPGGKQGFQFE-----EGCAANGSLSKEDAAFICVEALESIPQTGLIFEVVNGEE 287 (305)
Q Consensus 231 RPg~l~~~~~~~~~~~~~-----~~~~~~~~Is~~DvA~~iv~~l~~~~~~~~~~~v~~g~~ 287 (305)
||+.+.+.......+... .......+++++|+|++++.+++++...+++|++++++.
T Consensus 161 rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~ai~~~l~~~~~~g~~~~~~~~~~ 222 (227)
T 3dhn_A 161 SPAADMRPGVRTGRYRLGKDDMIVDIVGNSHISVEDYAAAMIDELEHPKHHQERFTIGYLEH 222 (227)
T ss_dssp ECCSEEESCCCCCCCEEESSBCCCCTTSCCEEEHHHHHHHHHHHHHSCCCCSEEEEEECCSC
T ss_pred eCCcccCCCccccceeecCCCcccCCCCCcEEeHHHHHHHHHHHHhCccccCcEEEEEeehh
Confidence 999965332211111111 111226789999999999999999999999999998764
|
| >3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=2.4e-24 Score=187.21 Aligned_cols=190 Identities=16% Similarity=0.106 Sum_probs=144.9
Q ss_pred CCCEEEEEcCCChHHHHHHHHHH-hCCCeEEEEEcCcc-hhhhh--cCCCcEEeecCCCCHHHHHHHhcCccEEEECCcc
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLI-VKRTRIKALVKDKR-NAMES--FGTYVESMAGDASNKKFLKTALRGVRSIICPSEG 172 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~-~~g~~V~~~~R~~~-~~~~~--~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~g 172 (305)
++++|+||||+|+||++++++|+ +.|++|++++|+++ +..+. ...+++++.+|++|.+++.++++++|+||++++.
T Consensus 4 mmk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vv~~ag~ 83 (221)
T 3r6d_A 4 MYXYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEIIDHERVTVIEGSFQNPGXLEQAVTNAEVVFVGAME 83 (221)
T ss_dssp SCSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHHHTSTTEEEEECCTTCHHHHHHHHTTCSEEEESCCC
T ss_pred eEEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhccCCCceEEEECCCCCHHHHHHHHcCCCEEEEcCCC
Confidence 45679999999999999999999 89999999999987 65544 4567999999999999999999999999998553
Q ss_pred ------hHhhhhhhcCCCEEEEEcccccccCCCCccccc----ch-HHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCC
Q 021928 173 ------FISNAGSLKGVQHVILLSQLSVYRGSGGIQALM----KG-NARKLAEQDESMLMASGIPYTIIRTGVLQNTPGG 241 (305)
Q Consensus 173 ------~~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~----~~-~~~~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~ 241 (305)
.+.+++++.++++||++||.+++...+...... .. .+...|..+|.++++.+++|++||||++.+....
T Consensus 84 ~n~~~~~~~~~~~~~~~~~iv~iSs~~~~~~~~~~~~~~~~~~~~~~y~~~K~~~e~~~~~~~i~~~~vrpg~v~~~~~~ 163 (221)
T 3r6d_A 84 SGSDMASIVKALSRXNIRRVIGVSMAGLSGEFPVALEKWTFDNLPISYVQGERQARNVLRESNLNYTILRLTWLYNDPEX 163 (221)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEEEETTTTSCSCHHHHHHHHHTSCHHHHHHHHHHHHHHHHSCSEEEEEEECEEECCTTC
T ss_pred CChhHHHHHHHHHhcCCCeEEEEeeceecCCCCcccccccccccccHHHHHHHHHHHHHHhCCCCEEEEechhhcCCCCC
Confidence 355667788999999999999887543221000 00 1233456788899999999999999998765333
Q ss_pred CcceeeecCCC-CCCccCHHHHHHHHHHHh--hCCC-CCCcEEEEecCC
Q 021928 242 KQGFQFEEGCA-ANGSLSKEDAAFICVEAL--ESIP-QTGLIFEVVNGE 286 (305)
Q Consensus 242 ~~~~~~~~~~~-~~~~Is~~DvA~~iv~~l--~~~~-~~~~~~~v~~g~ 286 (305)
........+.. ...+++++|+|++++.++ .++. ..++.+.+.++.
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~~~~~~~~~~~~~~~i~~~~ 212 (221)
T 3r6d_A 164 TDYELIPEGAQFNDAQVSREAVVKAIFDILHAADETPFHRTSIGVGEPG 212 (221)
T ss_dssp CCCEEECTTSCCCCCEEEHHHHHHHHHHHHTCSCCGGGTTEEEEEECTT
T ss_pred cceeeccCCccCCCceeeHHHHHHHHHHHHHhcChhhhhcceeeecCCC
Confidence 22221212222 234799999999999999 7766 578889888654
|
| >2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A | Back alignment and structure |
|---|
Probab=99.93 E-value=3.1e-25 Score=201.35 Aligned_cols=203 Identities=14% Similarity=0.178 Sum_probs=155.8
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCC-CeEEEEEcCcchh--hhhcCCCcEEeecCCCCHHHHHHHhcCccEEEECCcc--
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNA--MESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG-- 172 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~R~~~~~--~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~g-- 172 (305)
+|+|+||||||+||++++++|+++| ++|++++|++++. ......+++++.+|+.|.+++.++++++|+|||+++.
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~~~l~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~~~~ 84 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRLQGAEVVQGDQDDQVIMELALNGAYATFIVTNYWE 84 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEECCCHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHHHHHHHCCCEEEEecCCCHHHHHHHHhcCCEEEEeCCCCc
Confidence 4899999999999999999999999 9999999997653 2222346899999999999999999999999998541
Q ss_pred ------------hHhhhhhhcCCCEEEEEcccccccCCCCcccccchHHHHHHHHHHHHHHhCCCCEEEEecCCcccCCC
Q 021928 173 ------------FISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMASGIPYTIIRTGVLQNTPG 240 (305)
Q Consensus 173 ------------~~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~~~~~~aE~~l~~~gi~~tilRPg~l~~~~~ 240 (305)
.+.+++++.++++||++|+.+++....... ... ....|..+|++++++++++++||||++.+...
T Consensus 85 ~~~~~~~~~~~~~~~~aa~~~gv~~iv~~S~~~~~~~~~~~~-~~~--y~~sK~~~e~~~~~~gi~~~ilrp~~~~~~~~ 161 (299)
T 2wm3_A 85 SCSQEQEVKQGKLLADLARRLGLHYVVYSGLENIKKLTAGRL-AAA--HFDGKGEVEEYFRDIGVPMTSVRLPCYFENLL 161 (299)
T ss_dssp HTCHHHHHHHHHHHHHHHHHHTCSEEEECCCCCHHHHTTTSC-CCH--HHHHHHHHHHHHHHHTCCEEEEECCEEGGGGG
T ss_pred cccchHHHHHHHHHHHHHHHcCCCEEEEEcCccccccCCCcc-cCc--hhhHHHHHHHHHHHCCCCEEEEeecHHhhhch
Confidence 145667788999999988877664322110 111 12345678999999999999999998654311
Q ss_pred ---------CCcc--eeeecCCCCCCccCHHHHHHHHHHHhhCCC-CCCcEEEEecCCcCHHHHHHHHHHhhhhc
Q 021928 241 ---------GKQG--FQFEEGCAANGSLSKEDAAFICVEALESIP-QTGLIFEVVNGEEKVSDWKKCFSRLMEKT 303 (305)
Q Consensus 241 ---------~~~~--~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~-~~~~~~~v~~g~~s~~d~~~~~~~l~~~~ 303 (305)
.++. +.++.++....+++++|+|++++.++.++. ..+++|++++...++.|+++.+.++.|++
T Consensus 162 ~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~~g~~~~~~g~~~s~~e~~~~~~~~~g~~ 236 (299)
T 2wm3_A 162 SHFLPQKAPDGKSYLLSLPTGDVPMDGMSVSDLGPVVLSLLKMPEKYVGQNIGLSTCRHTAEEYAALLTKHTRKV 236 (299)
T ss_dssp TTTCCEECTTSSSEEECCCCTTSCEEEECGGGHHHHHHHHHHSHHHHTTCEEECCSEEECHHHHHHHHHHHHSSC
T ss_pred hhcCCcccCCCCEEEEEecCCCCccceecHHHHHHHHHHHHcChhhhCCeEEEeeeccCCHHHHHHHHHHHHCCC
Confidence 1111 122335555788999999999999998753 46789999875579999999999998875
|
| >3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.93 E-value=9.5e-25 Score=188.77 Aligned_cols=182 Identities=10% Similarity=0.111 Sum_probs=127.9
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEECCcc------
Q 021928 99 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG------ 172 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~g------ 172 (305)
|+||||||+|+||++++++|+++|++|++++|++++..... .+++++.+|++|.++ +++.++|+|||+++.
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-~~~~~~~~D~~d~~~--~~~~~~d~vi~~ag~~~~~~~ 77 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH-KDINILQKDIFDLTL--SDLSDQNVVVDAYGISPDEAE 77 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHC-SSSEEEECCGGGCCH--HHHTTCSEEEECCCSSTTTTT
T ss_pred CeEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhcc-CCCeEEeccccChhh--hhhcCCCEEEECCcCCccccc
Confidence 68999999999999999999999999999999987765444 679999999999877 889999999998431
Q ss_pred -------hHhhhhhhcCCCEEEEEcccccccCCCC------------cccccchHHHHHHHHHHHHHH--hCCCCEEEEe
Q 021928 173 -------FISNAGSLKGVQHVILLSQLSVYRGSGG------------IQALMKGNARKLAEQDESMLM--ASGIPYTIIR 231 (305)
Q Consensus 173 -------~~~~~a~~~gv~~~V~iSS~~~~~~~~~------------~~~~~~~~~~~~~~~aE~~l~--~~gi~~tilR 231 (305)
.+.+++++.++++||++||.+++..... ...|.. .+.+.+.+..++ +.+++|++||
T Consensus 78 ~~~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~---~k~~~e~~~~~~~~~~gi~~~ivr 154 (221)
T 3ew7_A 78 KHVTSLDHLISVLNGTVSPRLLVVGGAASLQIDEDGNTLLESKGLREAPYYPT---ARAQAKQLEHLKSHQAEFSWTYIS 154 (221)
T ss_dssp SHHHHHHHHHHHHCSCCSSEEEEECCCC-------------------CCCSCC---HHHHHHHHHHHHTTTTTSCEEEEE
T ss_pred hHHHHHHHHHHHHHhcCCceEEEEecceEEEcCCCCccccccCCCCCHHHHHH---HHHHHHHHHHHHhhccCccEEEEe
Confidence 2566778888999999999877543221 111222 222222223466 7899999999
Q ss_pred cCCcccC-CCCCcceee-----ecCCCCCCccCHHHHHHHHHHHhhCCCCCCcEEEEecCCc
Q 021928 232 TGVLQNT-PGGKQGFQF-----EEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVVNGEE 287 (305)
Q Consensus 232 Pg~l~~~-~~~~~~~~~-----~~~~~~~~~Is~~DvA~~iv~~l~~~~~~~~~~~v~~g~~ 287 (305)
|+++.+. ...+. +.. ........+|+++|+|++++.+++++...++.|++++...
T Consensus 155 p~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~g~~~~~~~~~~ 215 (221)
T 3ew7_A 155 PSAMFEPGERTGD-YQIGKDHLLFGSDGNSFISMEDYAIAVLDEIERPNHLNEHFTVAGKLE 215 (221)
T ss_dssp CSSCCCCC----------------------CCCHHHHHHHHHHHHHSCSCTTSEEECCC---
T ss_pred CcceecCCCccCc-eEeccccceecCCCCceEeHHHHHHHHHHHHhCccccCCEEEECCCCc
Confidence 9997653 21111 111 1111224689999999999999999999999999998664
|
| >3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=2.1e-24 Score=200.04 Aligned_cols=204 Identities=12% Similarity=0.140 Sum_probs=155.4
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcc----hhh---hhcCCCcEEeecCCCCHHHHHHHhc--CccEEEE
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR----NAM---ESFGTYVESMAGDASNKKFLKTALR--GVRSIIC 168 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~----~~~---~~~~~~v~~v~~D~~d~~~~~~~~~--~~d~Vi~ 168 (305)
+|+||||||||+||++|+++|++.|++|++++|++. +.. .....+++++.+|+.|.+++.++++ ++|+|||
T Consensus 10 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vi~ 89 (346)
T 3i6i_A 10 KGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINEQEAMEKILKEHEIDIVVS 89 (346)
T ss_dssp -CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHHHTTCCEEEE
T ss_pred CCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecCCHHHHHHHHhhCCCCEEEE
Confidence 479999999999999999999999999999999872 221 1223579999999999999999999 9999999
Q ss_pred CCcc-------hHhhhhhhcC-CCEEEEEcccccccC-CCCcccccchHHHHHHHHHHHHHHhCCCCEEEEecCCcccCC
Q 021928 169 PSEG-------FISNAGSLKG-VQHVILLSQLSVYRG-SGGIQALMKGNARKLAEQDESMLMASGIPYTIIRTGVLQNTP 239 (305)
Q Consensus 169 ~~~g-------~~~~~a~~~g-v~~~V~iSS~~~~~~-~~~~~~~~~~~~~~~~~~aE~~l~~~gi~~tilRPg~l~~~~ 239 (305)
+++. .+.+++++.+ +++||+ |+.+.... .....+... ....|..+|+++++.+++|+++|||++.+..
T Consensus 90 ~a~~~n~~~~~~l~~aa~~~g~v~~~v~-S~~g~~~~e~~~~~p~~~--y~~sK~~~e~~l~~~g~~~tivrpg~~~g~~ 166 (346)
T 3i6i_A 90 TVGGESILDQIALVKAMKAVGTIKRFLP-SEFGHDVNRADPVEPGLN--MYREKRRVRQLVEESGIPFTYICCNSIASWP 166 (346)
T ss_dssp CCCGGGGGGHHHHHHHHHHHCCCSEEEC-SCCSSCTTTCCCCTTHHH--HHHHHHHHHHHHHHTTCCBEEEECCEESSCC
T ss_pred CCchhhHHHHHHHHHHHHHcCCceEEee-cccCCCCCccCcCCCcch--HHHHHHHHHHHHHHcCCCEEEEEeccccccc
Confidence 8542 2677888888 999986 65543211 111112212 2234667899999999999999999866532
Q ss_pred C------------CCcceeeecCCCCCCccCHHHHHHHHHHHhhCCCCCCcEEEEec-C-CcCHHHHHHHHHHhhhhcC
Q 021928 240 G------------GKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVVN-G-EEKVSDWKKCFSRLMEKTG 304 (305)
Q Consensus 240 ~------------~~~~~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~~~~~~~~v~~-g-~~s~~d~~~~~~~l~~~~~ 304 (305)
. .+....++.++....+++++|+|++++.++.++...++.|++.+ + ..++.|+++.+.++.|++.
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~g~~~~~s~~e~~~~~~~~~g~~~ 245 (346)
T 3i6i_A 167 YYNNIHPSEVLPPTDFFQIYGDGNVKAYFVAGTDIGKFTMKTVDDVRTLNKSVHFRPSCNCLNINELASVWEKKIGRTL 245 (346)
T ss_dssp CSCC-----CCCCSSCEEEETTSCCCEEEECHHHHHHHHHHHTTCGGGTTEEEECCCGGGEECHHHHHHHHHHHHTSCC
T ss_pred CccccccccccCCCceEEEccCCCceEEecCHHHHHHHHHHHHhCccccCeEEEEeCCCCCCCHHHHHHHHHHHHCCCC
Confidence 1 11222234555667899999999999999998877789999984 3 3599999999999998753
|
| >4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.92 E-value=3.1e-24 Score=198.33 Aligned_cols=206 Identities=13% Similarity=0.096 Sum_probs=152.1
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCC--CeEEEEEcCcch--hh---hhc-CCCcEEeecCCCCHHHHHHHhcC--cc
Q 021928 95 PEARDAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRN--AM---ESF-GTYVESMAGDASNKKFLKTALRG--VR 164 (305)
Q Consensus 95 ~~~~~~vlVtGatG~iG~~l~~~L~~~g--~~V~~~~R~~~~--~~---~~~-~~~v~~v~~D~~d~~~~~~~~~~--~d 164 (305)
..++|+||||||+|+||++|+++|+++| ++|++++|.... .. ... ..+++++.+|+.|.+++.+++++ +|
T Consensus 21 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 100 (346)
T 4egb_A 21 QSNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSIQDHPNYYFVKGEIQNGELLEHVIKERDVQ 100 (346)
T ss_dssp ---CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHTCC
T ss_pred ccCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccchhhhhhhccCCCeEEEEcCCCCHHHHHHHHhhcCCC
Confidence 3456899999999999999999999999 678888776422 11 111 24799999999999999999987 99
Q ss_pred EEEECCcc----------------------hHhhhhhhcCCCEEEEEcccccccCCCCc---------ccccchHHHHHH
Q 021928 165 SIICPSEG----------------------FISNAGSLKGVQHVILLSQLSVYRGSGGI---------QALMKGNARKLA 213 (305)
Q Consensus 165 ~Vi~~~~g----------------------~~~~~a~~~gv~~~V~iSS~~~~~~~~~~---------~~~~~~~~~~~~ 213 (305)
+|||+++. .+.+++++.++++||++||.++|...... .+...| ...|
T Consensus 101 ~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vy~~~~~~~~~~E~~~~~p~~~Y--~~sK 178 (346)
T 4egb_A 101 VIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYPHIKLVQVSTDEVYGSLGKTGRFTEETPLAPNSPY--SSSK 178 (346)
T ss_dssp EEEECCCCC---------CHHHHHHTHHHHHHHHHHHHSTTSEEEEEEEGGGGCCCCSSCCBCTTSCCCCCSHH--HHHH
T ss_pred EEEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCchHHhCCCCcCCCcCCCCCCCCCChh--HHHH
Confidence 99998431 14566788899999999999988753211 111112 2234
Q ss_pred HHHHHHHHh----CCCCEEEEecCCcccCCC--------------CCcce-eeecCCCCCCccCHHHHHHHHHHHhhCCC
Q 021928 214 EQDESMLMA----SGIPYTIIRTGVLQNTPG--------------GKQGF-QFEEGCAANGSLSKEDAAFICVEALESIP 274 (305)
Q Consensus 214 ~~aE~~l~~----~gi~~tilRPg~l~~~~~--------------~~~~~-~~~~~~~~~~~Is~~DvA~~iv~~l~~~~ 274 (305)
..+|.+++. .+++++++||+.+.+... .+..+ .++.+.....+|+++|+|++++.+++++.
T Consensus 179 ~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~ 258 (346)
T 4egb_A 179 ASADMIALAYYKTYQLPVIVTRCSNNYGPYQYPEKLIPLMVTNALEGKKLPLYGDGLNVRDWLHVTDHCSAIDVVLHKGR 258 (346)
T ss_dssp HHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTTSHHHHHHHHHHTTCCCEEETTSCCEECEEEHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHhCCCEEEEeecceeCcCCCccchHHHHHHHHHcCCCceeeCCCCeEEeeEEHHHHHHHHHHHHhcCC
Confidence 456665554 699999999999654321 11222 22345566789999999999999998776
Q ss_pred CCCcEEEEecCC-cCHHHHHHHHHHhhhhc
Q 021928 275 QTGLIFEVVNGE-EKVSDWKKCFSRLMEKT 303 (305)
Q Consensus 275 ~~~~~~~v~~g~-~s~~d~~~~~~~l~~~~ 303 (305)
.+++|++++++ .++.|+++.+.++.+.+
T Consensus 259 -~g~~~~i~~~~~~s~~e~~~~i~~~~g~~ 287 (346)
T 4egb_A 259 -VGEVYNIGGNNEKTNVEVVEQIITLLGKT 287 (346)
T ss_dssp -TTCEEEECCSCCEEHHHHHHHHHHHHTCC
T ss_pred -CCCEEEECCCCceeHHHHHHHHHHHhCCC
Confidence 68899999877 69999999999998864
|
| >3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} | Back alignment and structure |
|---|
Probab=99.92 E-value=3.2e-24 Score=186.16 Aligned_cols=184 Identities=10% Similarity=0.089 Sum_probs=136.3
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEECCcc------
Q 021928 99 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG------ 172 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~g------ 172 (305)
|+||||||+|+||++++++|+++|++|++++|++++..+....+++++.+|+.|.++ +++.++|+|||+++.
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~D~~d~~~--~~~~~~d~vi~~ag~~~~~~~ 78 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRLGATVATLVKEPLVLTE--ADLDSVDAVVDALSVPWGSGR 78 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHTCTTSEEEECCGGGCCH--HHHTTCSEEEECCCCCTTSSC
T ss_pred CEEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecccccccccCCCceEEecccccccH--hhcccCCEEEECCccCCCcch
Confidence 579999999999999999999999999999999887766666789999999999877 889999999998432
Q ss_pred ---------hHhhhhhhcCCCEEEEEcccccccCCCC-----------cccccchHHHHHH-HHHHHHHHhCCCCEEEEe
Q 021928 173 ---------FISNAGSLKGVQHVILLSQLSVYRGSGG-----------IQALMKGNARKLA-EQDESMLMASGIPYTIIR 231 (305)
Q Consensus 173 ---------~~~~~a~~~gv~~~V~iSS~~~~~~~~~-----------~~~~~~~~~~~~~-~~aE~~l~~~gi~~tilR 231 (305)
.+.+++++.+ ++||++||.+++..... +.+...|...+.. +..+.+.++.++++++||
T Consensus 79 ~~~n~~~~~~l~~a~~~~~-~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~i~~~ivr 157 (224)
T 3h2s_A 79 GYLHLDFATHLVSLLRNSD-TLAVFILGSASLAMPGADHPMILDFPESAASQPWYDGALYQYYEYQFLQMNANVNWIGIS 157 (224)
T ss_dssp THHHHHHHHHHHHTCTTCC-CEEEEECCGGGSBCTTCSSCGGGGCCGGGGGSTTHHHHHHHHHHHHHHTTCTTSCEEEEE
T ss_pred hhHHHHHHHHHHHHHHHcC-CcEEEEecceeeccCCCCccccccCCCCCccchhhHHHHHHHHHHHHHHhcCCCcEEEEc
Confidence 1556778888 99999999866542211 0011222222222 212222346899999999
Q ss_pred cCCcccCCCCCcceeee-----cCCCCCCccCHHHHHHHHHHHhhCCCCCCcEEEEecCC
Q 021928 232 TGVLQNTPGGKQGFQFE-----EGCAANGSLSKEDAAFICVEALESIPQTGLIFEVVNGE 286 (305)
Q Consensus 232 Pg~l~~~~~~~~~~~~~-----~~~~~~~~Is~~DvA~~iv~~l~~~~~~~~~~~v~~g~ 286 (305)
|+++.+..... .+... .++....+++++|+|++++.+++++...+++|++++.+
T Consensus 158 p~~v~g~~~~~-~~~~~~~~~~~~~~~~~~i~~~DvA~~~~~~l~~~~~~g~~~~~~~~~ 216 (224)
T 3h2s_A 158 PSEAFPSGPAT-SYVAGKDTLLVGEDGQSHITTGNMALAILDQLEHPTAIRDRIVVRDAD 216 (224)
T ss_dssp ECSBCCCCCCC-CEEEESSBCCCCTTSCCBCCHHHHHHHHHHHHHSCCCTTSEEEEEECC
T ss_pred CccccCCCccc-CceecccccccCCCCCceEeHHHHHHHHHHHhcCccccCCEEEEecCc
Confidence 99976442211 12221 22344678999999999999999999899999999855
|
| >2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=7.5e-24 Score=198.94 Aligned_cols=204 Identities=13% Similarity=0.030 Sum_probs=152.6
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEECCcc---
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG--- 172 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~g--- 172 (305)
.++|+||||||+|+||++++++|+++|++|++++|++.+.......+++++.+|+.|.+++.++++++|+|||+++.
T Consensus 27 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~Vih~A~~~~~ 106 (379)
T 2c5a_A 27 SENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMFCDEFHLVDLRVMENCLKVTEGVDHVFNLAADMGG 106 (379)
T ss_dssp TSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGGGTCSEEEECCTTSHHHHHHHHTTCSEEEECCCCCCC
T ss_pred ccCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhhccCCceEEECCCCCHHHHHHHhCCCCEEEECceecCc
Confidence 35689999999999999999999999999999999876543333346899999999999999999999999998331
Q ss_pred --------------------hHhhhhhhcCCCEEEEEcccccccCCC---------------CcccccchHHHHHHHHHH
Q 021928 173 --------------------FISNAGSLKGVQHVILLSQLSVYRGSG---------------GIQALMKGNARKLAEQDE 217 (305)
Q Consensus 173 --------------------~~~~~a~~~gv~~~V~iSS~~~~~~~~---------------~~~~~~~~~~~~~~~~aE 217 (305)
.+.+++++.++++||++||.++|.... ...+...| ...|..+|
T Consensus 107 ~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~~V~~SS~~v~~~~~~~~~~~~~~~E~~~~~~~~~~~Y--~~sK~~~E 184 (379)
T 2c5a_A 107 MGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAF--GLEKLATE 184 (379)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSSBCCSSHH--HHHHHHHH
T ss_pred ccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeehheeCCCCCCCccCCCcCcccCCCCCCCChh--HHHHHHHH
Confidence 134556778999999999998876321 11111122 22344456
Q ss_pred HHHH----hCCCCEEEEecCCcccCCCC------------------Ccc-ee-eecCCCCCCccCHHHHHHHHHHHhhCC
Q 021928 218 SMLM----ASGIPYTIIRTGVLQNTPGG------------------KQG-FQ-FEEGCAANGSLSKEDAAFICVEALESI 273 (305)
Q Consensus 218 ~~l~----~~gi~~tilRPg~l~~~~~~------------------~~~-~~-~~~~~~~~~~Is~~DvA~~iv~~l~~~ 273 (305)
.+++ +.++++++|||+.+.+.... +.. +. ++.+.....+++++|+|++++.+++++
T Consensus 185 ~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~ai~~~l~~~ 264 (379)
T 2c5a_A 185 ELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLTKSD 264 (379)
T ss_dssp HHHHHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEECCEEHHHHHHHHHHHHHSS
T ss_pred HHHHHHHHHHCCCEEEEEeCceeCcCCCcccccccHHHHHHHHHHhCCCceEEeCCCCeeEEEEEHHHHHHHHHHHhhcc
Confidence 5553 46999999999996543211 111 21 233445578999999999999999876
Q ss_pred CCCCcEEEEecCC-cCHHHHHHHHHHhhhhc
Q 021928 274 PQTGLIFEVVNGE-EKVSDWKKCFSRLMEKT 303 (305)
Q Consensus 274 ~~~~~~~~v~~g~-~s~~d~~~~~~~l~~~~ 303 (305)
.+++|++++++ .++.|+++.+.++.+.+
T Consensus 265 --~~~~~ni~~~~~~s~~e~~~~i~~~~g~~ 293 (379)
T 2c5a_A 265 --FREPVNIGSDEMVSMNEMAEMVLSFEEKK 293 (379)
T ss_dssp --CCSCEEECCCCCEEHHHHHHHHHHTTTCC
T ss_pred --CCCeEEeCCCCccCHHHHHHHHHHHhCCC
Confidence 46799999866 58999999999988764
|
| >3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=1.7e-24 Score=197.16 Aligned_cols=201 Identities=15% Similarity=0.137 Sum_probs=151.6
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEECCcc------
Q 021928 99 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG------ 172 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~g------ 172 (305)
|+||||||+|+||++++++|+++|++|++++|++....+....+++++.+|+.|.+ +.+++++ |+|||+++.
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~d~~-~~~~~~~-d~vih~A~~~~~~~~ 78 (312)
T 3ko8_A 1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREFVNPSAELHVRDLKDYS-WGAGIKG-DVVFHFAANPEVRLS 78 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGGSCTTSEEECCCTTSTT-TTTTCCC-SEEEECCSSCSSSGG
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhhcCCCceEEECccccHH-HHhhcCC-CEEEECCCCCCchhh
Confidence 68999999999999999999999999999999887655555678999999999988 8888988 999998431
Q ss_pred ----------------hHhhhhhhcCCCEEEEEcccccccCCCC--------cccccchHHHHHHHHHHHHHH----hCC
Q 021928 173 ----------------FISNAGSLKGVQHVILLSQLSVYRGSGG--------IQALMKGNARKLAEQDESMLM----ASG 224 (305)
Q Consensus 173 ----------------~~~~~a~~~gv~~~V~iSS~~~~~~~~~--------~~~~~~~~~~~~~~~aE~~l~----~~g 224 (305)
.+.+++++.++++||++||..+|..... ..+...|. ..|..+|.+++ +.+
T Consensus 79 ~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~vyg~~~~~~~~e~~~~~p~~~Y~--~sK~~~e~~~~~~~~~~g 156 (312)
T 3ko8_A 79 TTEPIVHFNENVVATFNVLEWARQTGVRTVVFASSSTVYGDADVIPTPEEEPYKPISVYG--AAKAAGEVMCATYARLFG 156 (312)
T ss_dssp GSCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHH--HHHHHHHHHHHHHHHHHC
T ss_pred hhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeCcHHHhCCCCCCCCCCCCCCCCCChHH--HHHHHHHHHHHHHHHHhC
Confidence 1455677889999999999999864321 11122222 23444555544 369
Q ss_pred CCEEEEecCCcccCCCC-------------C-cce-eeecCCCCCCccCHHHHHHHHHHHhhC---CCCCCcEEEEecCC
Q 021928 225 IPYTIIRTGVLQNTPGG-------------K-QGF-QFEEGCAANGSLSKEDAAFICVEALES---IPQTGLIFEVVNGE 286 (305)
Q Consensus 225 i~~tilRPg~l~~~~~~-------------~-~~~-~~~~~~~~~~~Is~~DvA~~iv~~l~~---~~~~~~~~~v~~g~ 286 (305)
++++++||+.+.+.... + ..+ .++.+.....+++++|+|++++.++++ +...+++||+++++
T Consensus 157 ~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~ni~~~~ 236 (312)
T 3ko8_A 157 VRCLAVRYANVVGPRLRHGVIYDFIMKLRRNPNVLEVLGDGTQRKSYLYVRDAVEATLAAWKKFEEMDAPFLALNVGNVD 236 (312)
T ss_dssp CEEEEEEECEEECTTCCSSHHHHHHHHHHHCTTEEEEC----CEECEEEHHHHHHHHHHHHHHHHHSCCSEEEEEESCSS
T ss_pred CCEEEEeeccccCcCCCCChHHHHHHHHHhCCCCeEEcCCCCeEEeeEEHHHHHHHHHHHHHhccccCCCCcEEEEcCCC
Confidence 99999999996543211 1 111 233445567899999999999999987 45667899999876
Q ss_pred -cCHHHHHHHHHHhhhhc
Q 021928 287 -EKVSDWKKCFSRLMEKT 303 (305)
Q Consensus 287 -~s~~d~~~~~~~l~~~~ 303 (305)
.++.|+++.+.+..+.+
T Consensus 237 ~~s~~e~~~~i~~~~g~~ 254 (312)
T 3ko8_A 237 AVRVLDIAQIVAEVLGLR 254 (312)
T ss_dssp CEEHHHHHHHHHHHHTCC
T ss_pred ceeHHHHHHHHHHHhCCC
Confidence 58999999999998764
|
| >1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=8.4e-24 Score=197.28 Aligned_cols=200 Identities=17% Similarity=0.170 Sum_probs=154.0
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchh--hhhcC-CCcEEeecC-CCCHHHHHHHhcCccEEEECCcc-
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA--MESFG-TYVESMAGD-ASNKKFLKTALRGVRSIICPSEG- 172 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~--~~~~~-~~v~~v~~D-~~d~~~~~~~~~~~d~Vi~~~~g- 172 (305)
+|+|+||||||+||++++++|+++|++|++++|++++. ..... .+++++.+| ++|.+++.++++++|+|||+++.
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~l~~~~~v~~v~~D~l~d~~~l~~~~~~~d~Vi~~a~~~ 84 (352)
T 1xgk_A 5 KKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPLMDTLFEGAHLAFINTTSQ 84 (352)
T ss_dssp CCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHHTSTTEEEEESCCTTCHHHHHHHHTTCSEEEECCCST
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhhHHHHhhcCCcEEEECCccCCHHHHHHHHhcCCEEEEcCCCC
Confidence 58899999999999999999999999999999987653 22222 368999999 99999999999999999987332
Q ss_pred ---------hHhhhhhhcC-CCEEEEEccccc--ccCCCCcccccchHHHHHHHHHHHHHHhCCCCEEEEecCCcccCCC
Q 021928 173 ---------FISNAGSLKG-VQHVILLSQLSV--YRGSGGIQALMKGNARKLAEQDESMLMASGIPYTIIRTGVLQNTPG 240 (305)
Q Consensus 173 ---------~~~~~a~~~g-v~~~V~iSS~~~--~~~~~~~~~~~~~~~~~~~~~aE~~l~~~gi~~tilRPg~l~~~~~ 240 (305)
.+.+++++.+ +++||++||... +.. .....|. ..|..+|+++++.++++++|||+++.++..
T Consensus 85 ~~~~~~~~~~l~~aa~~~g~v~~~V~~SS~~~~~~~~-~~~~~y~-----~sK~~~E~~~~~~gi~~~ivrpg~~g~~~~ 158 (352)
T 1xgk_A 85 AGDEIAIGKDLADAAKRAGTIQHYIYSSMPDHSLYGP-WPAVPMW-----APKFTVENYVRQLGLPSTFVYAGIYNNNFT 158 (352)
T ss_dssp TSCHHHHHHHHHHHHHHHSCCSEEEEEECCCGGGTSS-CCCCTTT-----HHHHHHHHHHHTSSSCEEEEEECEEGGGCB
T ss_pred CcHHHHHHHHHHHHHHHcCCccEEEEeCCccccccCC-CCCccHH-----HHHHHHHHHHHHcCCCEEEEecceecCCch
Confidence 2556778888 999999999862 322 2222332 235678999999999999999998754322
Q ss_pred C-----------Ccc-e--e-eecCCCCCCccCH-HHHHHHHHHHhhCCC--CCCcEEEEecCCcCHHHHHHHHHHhhhh
Q 021928 241 G-----------KQG-F--Q-FEEGCAANGSLSK-EDAAFICVEALESIP--QTGLIFEVVNGEEKVSDWKKCFSRLMEK 302 (305)
Q Consensus 241 ~-----------~~~-~--~-~~~~~~~~~~Is~-~DvA~~iv~~l~~~~--~~~~~~~v~~g~~s~~d~~~~~~~l~~~ 302 (305)
. ..+ . . ...++....++++ +|+|++++.++.++. ..+++|+++++..++.|+++.+.+++++
T Consensus 159 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~v~~Dva~ai~~~l~~~~~~~~g~~~~l~~~~~s~~e~~~~i~~~~G~ 238 (352)
T 1xgk_A 159 SLPYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQKWNGHRIALTFETLSPVQVCAAFSRALNR 238 (352)
T ss_dssp SSSCSSCBEEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHHHCHHHHTTCEEEECSEEECHHHHHHHHHHHHTS
T ss_pred hcccccccccccCCCceEEeeccCCCCceeeEecHHHHHHHHHHHHhCCchhhCCeEEEEecCCCCHHHHHHHHHHHHCC
Confidence 1 111 1 1 1224455678998 999999999998753 3689999997667999999999999887
Q ss_pred c
Q 021928 303 T 303 (305)
Q Consensus 303 ~ 303 (305)
+
T Consensus 239 ~ 239 (352)
T 1xgk_A 239 R 239 (352)
T ss_dssp C
T ss_pred C
Confidence 5
|
| >3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.92 E-value=5.6e-24 Score=194.09 Aligned_cols=201 Identities=14% Similarity=0.106 Sum_probs=147.1
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEECCcc-----
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG----- 172 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~g----- 172 (305)
||+||||||+||||++++++|+++| .++++.+......+.....++++.+|+.| +++.++++++|+|||+++.
T Consensus 1 M~~vlVTGatG~iG~~l~~~L~~~g-~~v~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~d~vih~a~~~~~~~ 78 (313)
T 3ehe_A 1 MSLIVVTGGAGFIGSHVVDKLSESN-EIVVIDNLSSGNEEFVNEAARLVKADLAA-DDIKDYLKGAEEVWHIAANPDVRI 78 (313)
T ss_dssp --CEEEETTTSHHHHHHHHHHTTTS-CEEEECCCSSCCGGGSCTTEEEECCCTTT-SCCHHHHTTCSEEEECCCCCCCC-
T ss_pred CCEEEEECCCchHHHHHHHHHHhCC-CEEEEEcCCCCChhhcCCCcEEEECcCCh-HHHHHHhcCCCEEEECCCCCChhh
Confidence 4789999999999999999999999 55555554433333445679999999999 9999999999999988431
Q ss_pred -----------------hHhhhhhhcCCCEEEEEcccccccCCCC--------cccccchHHHHHHHHHHHHHH----hC
Q 021928 173 -----------------FISNAGSLKGVQHVILLSQLSVYRGSGG--------IQALMKGNARKLAEQDESMLM----AS 223 (305)
Q Consensus 173 -----------------~~~~~a~~~gv~~~V~iSS~~~~~~~~~--------~~~~~~~~~~~~~~~aE~~l~----~~ 223 (305)
.+.+++++.++++||++||..+|..... ..+...|. ..|..+|.+++ +.
T Consensus 79 ~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~--~sK~~~e~~~~~~~~~~ 156 (313)
T 3ehe_A 79 GAENPDEIYRNNVLATYRLLEAMRKAGVSRIVFTSTSTVYGEAKVIPTPEDYPTHPISLYG--ASKLACEALIESYCHTF 156 (313)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEECCGGGGCSCSSSSBCTTSCCCCCSHHH--HHHHHHHHHHHHHHHHT
T ss_pred hhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCchHHhCcCCCCCCCCCCCCCCCCHHH--HHHHHHHHHHHHHHHhc
Confidence 1445677789999999999999864221 11112222 23444555554 47
Q ss_pred CCCEEEEecCCcccCCCC-------------C-cce-eeecCCCCCCccCHHHHHHHHHHHhhCCCCCCcEEEEecCC-c
Q 021928 224 GIPYTIIRTGVLQNTPGG-------------K-QGF-QFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVVNGE-E 287 (305)
Q Consensus 224 gi~~tilRPg~l~~~~~~-------------~-~~~-~~~~~~~~~~~Is~~DvA~~iv~~l~~~~~~~~~~~v~~g~-~ 287 (305)
+++++++||+.+.+.... + ..+ .++.++....+++++|+|++++.+++ +...+++||+++++ .
T Consensus 157 g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~-~~~~~~~~ni~~~~~~ 235 (313)
T 3ehe_A 157 DMQAWIYRFANVIGRRSTHGVIYDFIMKLKRNPEELEILGNGEQNKSYIYISDCVDAMLFGLR-GDERVNIFNIGSEDQI 235 (313)
T ss_dssp TCEEEEEECSCEESTTCCCSHHHHHHHHHHHCTTEEEESTTSCCEECCEEHHHHHHHHHHHTT-CCSSEEEEECCCSCCE
T ss_pred CCCEEEEeeccccCcCCCcChHHHHHHHHHcCCCceEEeCCCCeEEeEEEHHHHHHHHHHHhc-cCCCCceEEECCCCCe
Confidence 999999999996643211 1 112 23344556789999999999999998 44567899999875 5
Q ss_pred CHHHHHHHHHHhhhhc
Q 021928 288 KVSDWKKCFSRLMEKT 303 (305)
Q Consensus 288 s~~d~~~~~~~l~~~~ 303 (305)
++.|+++.+.+..+.+
T Consensus 236 s~~e~~~~i~~~~g~~ 251 (313)
T 3ehe_A 236 KVKRIAEIVCEELGLS 251 (313)
T ss_dssp EHHHHHHHHHHHTTCC
T ss_pred eHHHHHHHHHHHhCCC
Confidence 9999999999998764
|
| >2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} | Back alignment and structure |
|---|
Probab=99.92 E-value=6.4e-24 Score=192.85 Aligned_cols=203 Identities=15% Similarity=0.179 Sum_probs=150.6
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCc-------chhhh---hcCCCcEEeecCCCCHHHHHHHhcCccEEE
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK-------RNAME---SFGTYVESMAGDASNKKFLKTALRGVRSII 167 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~-------~~~~~---~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi 167 (305)
+|+|+||||||+||++++++|+++|++|++++|++ ++... ....+++++.+|+.|.+++.++++++|+||
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~d~vi 81 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDINDHETLVKAIKQVDIVI 81 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEE
T ss_pred CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCCCCHHHHHHHHhCCCEEE
Confidence 57899999999999999999999999999999987 33211 113468999999999999999999999999
Q ss_pred ECCcc-------hHhhhhhhcC-CCEEEEEcccccccCC-CCcccccchHHHHHHHHHHHHHHhCCCCEEEEecCCcccC
Q 021928 168 CPSEG-------FISNAGSLKG-VQHVILLSQLSVYRGS-GGIQALMKGNARKLAEQDESMLMASGIPYTIIRTGVLQNT 238 (305)
Q Consensus 168 ~~~~g-------~~~~~a~~~g-v~~~V~iSS~~~~~~~-~~~~~~~~~~~~~~~~~aE~~l~~~gi~~tilRPg~l~~~ 238 (305)
|+++. .+.+++++.| ++|||+ |+.+..... ....+.. ... ..|..+|+++++.+++|++||||++.+.
T Consensus 82 ~~a~~~~~~~~~~l~~aa~~~g~v~~~v~-S~~g~~~~~~~~~~p~~-~~y-~sK~~~e~~~~~~~i~~~~lrp~~~~~~ 158 (307)
T 2gas_A 82 CAAGRLLIEDQVKIIKAIKEAGNVKKFFP-SEFGLDVDRHDAVEPVR-QVF-EEKASIRRVIEAEGVPYTYLCCHAFTGY 158 (307)
T ss_dssp ECSSSSCGGGHHHHHHHHHHHCCCSEEEC-SCCSSCTTSCCCCTTHH-HHH-HHHHHHHHHHHHHTCCBEEEECCEETTT
T ss_pred ECCcccccccHHHHHHHHHhcCCceEEee-cccccCcccccCCCcch-hHH-HHHHHHHHHHHHcCCCeEEEEcceeecc
Confidence 98432 2567788888 999984 554432111 1111100 112 3456788999999999999999986543
Q ss_pred CC-----------CCcce-eeecCCCCCCccCHHHHHHHHHHHhhCCCCCCcEEEEecC-C-cCHHHHHHHHHHhhhhc
Q 021928 239 PG-----------GKQGF-QFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVVNG-E-EKVSDWKKCFSRLMEKT 303 (305)
Q Consensus 239 ~~-----------~~~~~-~~~~~~~~~~~Is~~DvA~~iv~~l~~~~~~~~~~~v~~g-~-~s~~d~~~~~~~l~~~~ 303 (305)
.. ..... .++.++....+++++|+|++++.++.++...++.|++.++ + .++.|+++.+.++.|++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~ 237 (307)
T 2gas_A 159 FLRNLAQLDATDPPRDKVVILGDGNVKGAYVTEADVGTFTIRAANDPNTLNKAVHIRLPKNYLTQNEVIALWEKKIGKT 237 (307)
T ss_dssp TGGGTTCTTCSSCCSSEEEEETTSCSEEEEECHHHHHHHHHHHHTCGGGTTEEEECCCGGGEEEHHHHHHHHHHHHTSC
T ss_pred ccccccccccccCCCCeEEEecCCCcceEEeeHHHHHHHHHHHHcCccccCceEEEeCCCCcCCHHHHHHHHHHHhCCC
Confidence 11 11112 2233445578899999999999999887667888888753 3 68999999999999875
|
| >1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=2.1e-23 Score=193.51 Aligned_cols=203 Identities=13% Similarity=0.049 Sum_probs=149.7
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcch----hhhh---c----CCCcEEeecCCCCHHHHHHHhcCcc
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN----AMES---F----GTYVESMAGDASNKKFLKTALRGVR 164 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~----~~~~---~----~~~v~~v~~D~~d~~~~~~~~~~~d 164 (305)
.++|+||||||+|+||++++++|+++|++|++++|++.. .... + ..+++++.+|+.|.+++.++++++|
T Consensus 25 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d 104 (352)
T 1sb8_A 25 AQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGVD 104 (352)
T ss_dssp HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTTCS
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhcCCC
Confidence 456899999999999999999999999999999997642 1111 1 2468999999999999999999999
Q ss_pred EEEECCcc----------------------hHhhhhhhcCCCEEEEEcccccccCCCCc--------ccccchHHHHHHH
Q 021928 165 SIICPSEG----------------------FISNAGSLKGVQHVILLSQLSVYRGSGGI--------QALMKGNARKLAE 214 (305)
Q Consensus 165 ~Vi~~~~g----------------------~~~~~a~~~gv~~~V~iSS~~~~~~~~~~--------~~~~~~~~~~~~~ 214 (305)
+|||+++. .+.+++.+.++++||++||.++|...... .+...| ...|.
T Consensus 105 ~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~E~~~~~~~~~Y--~~sK~ 182 (352)
T 1sb8_A 105 YVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTYGDHPGLPKVEDTIGKPLSPY--AVTKY 182 (352)
T ss_dssp EEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSHH--HHHHH
T ss_pred EEEECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhcCCCCCCCCCCCCCCCCCChh--HHHHH
Confidence 99998431 13455677899999999999988653210 111112 22344
Q ss_pred HHHHHHH----hCCCCEEEEecCCcccCCCC------------------Ccce-eeecCCCCCCccCHHHHHHHHHHHhh
Q 021928 215 QDESMLM----ASGIPYTIIRTGVLQNTPGG------------------KQGF-QFEEGCAANGSLSKEDAAFICVEALE 271 (305)
Q Consensus 215 ~aE~~l~----~~gi~~tilRPg~l~~~~~~------------------~~~~-~~~~~~~~~~~Is~~DvA~~iv~~l~ 271 (305)
.+|.+++ +.++++++|||+.+.+.... +... .++.++....+++++|+|++++.++.
T Consensus 183 ~~e~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~ 262 (352)
T 1sb8_A 183 VNELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQANLLAAT 262 (352)
T ss_dssp HHHHHHHHHHHHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHcCCCEEEEEECceeCcCCCCCcchhhHHHHHHHHHHCCCCcEEeCCCCceEeeEEHHHHHHHHHHHHh
Confidence 5566554 45999999999996543211 1111 12334445689999999999999997
Q ss_pred CC-CCCCcEEEEecCC-cCHHHHHHHHHHhh
Q 021928 272 SI-PQTGLIFEVVNGE-EKVSDWKKCFSRLM 300 (305)
Q Consensus 272 ~~-~~~~~~~~v~~g~-~s~~d~~~~~~~l~ 300 (305)
.+ ...+++|++++++ .++.|+++.+.+..
T Consensus 263 ~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~ 293 (352)
T 1sb8_A 263 AGLDARNQVYNIAVGGRTSLNQLFFALRDGL 293 (352)
T ss_dssp CCGGGCSEEEEESCSCCEEHHHHHHHHHHHH
T ss_pred ccccCCCceEEeCCCCCccHHHHHHHHHHHH
Confidence 63 4568999999875 58999999999988
|
| >3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} | Back alignment and structure |
|---|
Probab=99.91 E-value=4.7e-24 Score=192.35 Aligned_cols=198 Identities=15% Similarity=0.121 Sum_probs=153.5
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcC-ccEEEECCcc----
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRG-VRSIICPSEG---- 172 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~-~d~Vi~~~~g---- 172 (305)
+|+||||| +|+||++++++|+++|++|++++|++++ ...+++++.+|+.|.+++.+++++ +|+|||+++.
T Consensus 3 ~~~ilVtG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~----~~~~~~~~~~Dl~d~~~~~~~~~~~~d~vih~a~~~~~~ 77 (286)
T 3gpi_A 3 LSKILIAG-CGDLGLELARRLTAQGHEVTGLRRSAQP----MPAGVQTLIADVTRPDTLASIVHLRPEILVYCVAASEYS 77 (286)
T ss_dssp CCCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECTTSC----CCTTCCEEECCTTCGGGCTTGGGGCCSEEEECHHHHHHC
T ss_pred CCcEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCccc----cccCCceEEccCCChHHHHHhhcCCCCEEEEeCCCCCCC
Confidence 57999999 5999999999999999999999998765 346789999999999999999998 9999998321
Q ss_pred -------------hHhhhhhhcCCCEEEEEcccccccCCCCc--------ccccchHHHHHHHHHHHHHHhCCCCEEEEe
Q 021928 173 -------------FISNAGSLKGVQHVILLSQLSVYRGSGGI--------QALMKGNARKLAEQDESMLMASGIPYTIIR 231 (305)
Q Consensus 173 -------------~~~~~a~~~gv~~~V~iSS~~~~~~~~~~--------~~~~~~~~~~~~~~aE~~l~~~gi~~tilR 231 (305)
.+.+++++.++++||++||.++|...... .+... +...|..+|.+ ++. ++++++|
T Consensus 78 ~~~~~~~n~~~~~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~--Y~~sK~~~E~~-~~~-~~~~ilR 153 (286)
T 3gpi_A 78 DEHYRLSYVEGLRNTLSALEGAPLQHVFFVSSTGVYGQEVEEWLDEDTPPIAKDF--SGKRMLEAEAL-LAA-YSSTILR 153 (286)
T ss_dssp -----CCSHHHHHHHHHHTTTSCCCEEEEEEEGGGCCCCCSSEECTTSCCCCCSH--HHHHHHHHHHH-GGG-SSEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCCCEEEEEcccEEEcCCCCCCCCCCCCCCCCCh--hhHHHHHHHHH-Hhc-CCeEEEe
Confidence 15567778899999999999998643221 11112 23345667888 767 9999999
Q ss_pred cCCcccCCCC------CcceeeecCCCCCCccCHHHHHHHHHHHhhCC--CCCCcEEEEecCC-cCHHHHHHHHHHhhhh
Q 021928 232 TGVLQNTPGG------KQGFQFEEGCAANGSLSKEDAAFICVEALESI--PQTGLIFEVVNGE-EKVSDWKKCFSRLMEK 302 (305)
Q Consensus 232 Pg~l~~~~~~------~~~~~~~~~~~~~~~Is~~DvA~~iv~~l~~~--~~~~~~~~v~~g~-~s~~d~~~~~~~l~~~ 302 (305)
|+.+.+.... ......+.++....+|+++|+|++++.+++++ ...+++|++++++ .++.|+++.+.+..+.
T Consensus 154 ~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~i~~~~g~ 233 (286)
T 3gpi_A 154 FSGIYGPGRLRMIRQAQTPEQWPARNAWTNRIHRDDGAAFIAYLIQQRSHAVPERLYIVTDNQPLPVHDLLRWLADRQGI 233 (286)
T ss_dssp ECEEEBTTBCHHHHHTTCGGGSCSSBCEECEEEHHHHHHHHHHHHHHHTTSCCCSEEEECCSCCEEHHHHHHHHHHHTTC
T ss_pred cccccCCCchhHHHHHHhcccCCCcCceeEEEEHHHHHHHHHHHHhhhccCCCCceEEEeCCCCCCHHHHHHHHHHHcCC
Confidence 9996643221 01111233445568999999999999999875 4668999999876 6999999999999887
Q ss_pred cC
Q 021928 303 TG 304 (305)
Q Consensus 303 ~~ 304 (305)
+.
T Consensus 234 ~~ 235 (286)
T 3gpi_A 234 AY 235 (286)
T ss_dssp CC
T ss_pred CC
Confidence 53
|
| >2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=6.9e-24 Score=194.06 Aligned_cols=204 Identities=11% Similarity=0.120 Sum_probs=152.3
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcc-hhh---hhcCCCcEEeecCCCCHHHHHHHhcCccEEEECCcc
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR-NAM---ESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG 172 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~-~~~---~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~g 172 (305)
++++|+||||||+||++++++|+++|++|++++|++. +.. +....+++++.+|+.|.+++.++++++|+|||+++.
T Consensus 10 m~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~~~v~~v~~Dl~d~~~l~~a~~~~d~vi~~a~~ 89 (318)
T 2r6j_A 10 MKSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSLGAIIVKGELDEHEKLVELMKKVDVVISALAF 89 (318)
T ss_dssp CCCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEECCCG
T ss_pred CCCeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhcCCCEEEEecCCCHHHHHHHHcCCCEEEECCch
Confidence 3468999999999999999999999999999999875 221 112356899999999999999999999999998442
Q ss_pred -------hHhhhhhhcC-CCEEEEEcccccccCC-CCcccccchHHHHHHHHHHHHHHhCCCCEEEEecCCcccC-----
Q 021928 173 -------FISNAGSLKG-VQHVILLSQLSVYRGS-GGIQALMKGNARKLAEQDESMLMASGIPYTIIRTGVLQNT----- 238 (305)
Q Consensus 173 -------~~~~~a~~~g-v~~~V~iSS~~~~~~~-~~~~~~~~~~~~~~~~~aE~~l~~~gi~~tilRPg~l~~~----- 238 (305)
.+.+++++.+ +++||+ |+.+..... ....+.. .....|..+|+++++.++++++||||++.+.
T Consensus 90 ~~~~~~~~l~~aa~~~g~v~~~v~-S~~g~~~~~~~~~~p~~--~~y~sK~~~e~~~~~~~~~~~~lr~~~~~~~~~~~~ 166 (318)
T 2r6j_A 90 PQILDQFKILEAIKVAGNIKRFLP-SDFGVEEDRINALPPFE--ALIERKRMIRRAIEEANIPYTYVSANCFASYFINYL 166 (318)
T ss_dssp GGSTTHHHHHHHHHHHCCCCEEEC-SCCSSCTTTCCCCHHHH--HHHHHHHHHHHHHHHTTCCBEEEECCEEHHHHHHHH
T ss_pred hhhHHHHHHHHHHHhcCCCCEEEe-eccccCcccccCCCCcc--hhHHHHHHHHHHHHhcCCCeEEEEcceehhhhhhhh
Confidence 2667788888 999985 554432111 1111100 1113466789999999999999999986532
Q ss_pred --C--CCCcceeeecCCCCCCccCHHHHHHHHHHHhhCCCCCCcEEEEec-CC-cCHHHHHHHHHHhhhhc
Q 021928 239 --P--GGKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVVN-GE-EKVSDWKKCFSRLMEKT 303 (305)
Q Consensus 239 --~--~~~~~~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~~~~~~~~v~~-g~-~s~~d~~~~~~~l~~~~ 303 (305)
. .......++.++....+++++|+|++++.++.++...++.|++.+ ++ .++.|+++.+.+++|++
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~~~g~~~~~s~~e~~~~~~~~~g~~ 237 (318)
T 2r6j_A 167 LRPYDPKDEITVYGTGEAKFAMNYEQDIGLYTIKVATDPRALNRVVIYRPSTNIITQLELISRWEKKIGKK 237 (318)
T ss_dssp HCTTCCCSEEEEETTSCCEEEEECHHHHHHHHHHHTTCGGGTTEEEECCCGGGEEEHHHHHHHHHHHHTCC
T ss_pred ccccCCCCceEEecCCCceeeEeeHHHHHHHHHHHhcCccccCeEEEecCCCCccCHHHHHHHHHHHhCCC
Confidence 1 112222233455567899999999999999988766688888875 34 68999999999999875
|
| >1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.91 E-value=5.8e-24 Score=193.68 Aligned_cols=203 Identities=13% Similarity=0.152 Sum_probs=150.9
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcc-----hhh---hhcCCCcEEeecCCCCHHHHHHHhcCccEEEEC
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR-----NAM---ESFGTYVESMAGDASNKKFLKTALRGVRSIICP 169 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~-----~~~---~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~ 169 (305)
+|+|+||||||+||++++++|+++|++|++++|++. +.. .....+++++.+|+.|.+++.++++++|+|||+
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~ 83 (313)
T 1qyd_A 4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQVDVVISA 83 (313)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTCSEEEEC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHHhCCeEEEeCCCCCHHHHHHHHhCCCEEEEC
Confidence 478999999999999999999999999999999853 211 112457999999999999999999999999988
Q ss_pred Ccc-----------hHhhhhhhcC-CCEEEEEcccccccCC--CCcccccchHHHHHHHHHHHHHHhCCCCEEEEecCCc
Q 021928 170 SEG-----------FISNAGSLKG-VQHVILLSQLSVYRGS--GGIQALMKGNARKLAEQDESMLMASGIPYTIIRTGVL 235 (305)
Q Consensus 170 ~~g-----------~~~~~a~~~g-v~~~V~iSS~~~~~~~--~~~~~~~~~~~~~~~~~aE~~l~~~gi~~tilRPg~l 235 (305)
++. .+.+++++.| ++|||+ |+.+..... ....+.. ... ..|..+|+++++.++++|+||||++
T Consensus 84 a~~~~~~~~~~~~~~l~~aa~~~g~v~~~v~-S~~g~~~~~~~~~~~p~~-~~y-~sK~~~e~~~~~~g~~~~ilrp~~~ 160 (313)
T 1qyd_A 84 LAGGVLSHHILEQLKLVEAIKEAGNIKRFLP-SEFGMDPDIMEHALQPGS-ITF-IDKRKVRRAIEAASIPYTYVSSNMF 160 (313)
T ss_dssp CCCSSSSTTTTTHHHHHHHHHHSCCCSEEEC-SCCSSCTTSCCCCCSSTT-HHH-HHHHHHHHHHHHTTCCBCEEECCEE
T ss_pred CccccchhhHHHHHHHHHHHHhcCCCceEEe-cCCcCCccccccCCCCCc-chH-HHHHHHHHHHHhcCCCeEEEEecee
Confidence 331 2567788888 999986 655432211 1111100 112 4466789999999999999999986
Q ss_pred ccCC-----C-------CCcce-eeecCCCCCCccCHHHHHHHHHHHhhCCCCCCcEEEEecC-C-cCHHHHHHHHHHhh
Q 021928 236 QNTP-----G-------GKQGF-QFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVVNG-E-EKVSDWKKCFSRLM 300 (305)
Q Consensus 236 ~~~~-----~-------~~~~~-~~~~~~~~~~~Is~~DvA~~iv~~l~~~~~~~~~~~v~~g-~-~s~~d~~~~~~~l~ 300 (305)
.+.. . ..... .++.++....+++++|+|++++.++.++...++.|++.++ + .++.|+++.+.+++
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~~~g~~~~~s~~e~~~~~~~~~ 240 (313)
T 1qyd_A 161 AGYFAGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQTLNKTMYIRPPMNILSQKEVIQIWERLS 240 (313)
T ss_dssp HHHHTTTSSCTTCCSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHHTTCGGGSSSEEECCCGGGEEEHHHHHHHHHHHH
T ss_pred ccccccccccccccccCCCCeEEEeCCCCceEEEEEHHHHHHHHHHHHhCcccCCceEEEeCCCCccCHHHHHHHHHHhc
Confidence 5311 0 11111 1233445578899999999999999887666888888853 3 68999999999999
Q ss_pred hhc
Q 021928 301 EKT 303 (305)
Q Consensus 301 ~~~ 303 (305)
|++
T Consensus 241 g~~ 243 (313)
T 1qyd_A 241 EQN 243 (313)
T ss_dssp TCC
T ss_pred CCC
Confidence 875
|
| >3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.91 E-value=2e-23 Score=192.34 Aligned_cols=204 Identities=15% Similarity=0.154 Sum_probs=150.8
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh-------cCCCcEEeecCCCCHHHHHHHhc--CccEEEE
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------FGTYVESMAGDASNKKFLKTALR--GVRSIIC 168 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~-------~~~~v~~v~~D~~d~~~~~~~~~--~~d~Vi~ 168 (305)
+|+||||||+|+||++++++|+++|++|++++|+.+...+. .+.+++++.+|++|.+++.++++ ++|+|||
T Consensus 5 ~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih 84 (341)
T 3enk_A 5 KGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDAHPITAAIH 84 (341)
T ss_dssp SCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHHSCCCEEEE
T ss_pred CcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhccCCcEEEE
Confidence 58999999999999999999999999999999986553221 24578999999999999999998 8999999
Q ss_pred CCcc----------------------hHhhhhhhcCCCEEEEEcccccccCCCC--------cccccchHHHHHHHHHHH
Q 021928 169 PSEG----------------------FISNAGSLKGVQHVILLSQLSVYRGSGG--------IQALMKGNARKLAEQDES 218 (305)
Q Consensus 169 ~~~g----------------------~~~~~a~~~gv~~~V~iSS~~~~~~~~~--------~~~~~~~~~~~~~~~aE~ 218 (305)
+++. .+.+++++.++++||++||..+|..... ..+...| ...|..+|.
T Consensus 85 ~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~e~~~~~~~~~Y--~~sK~~~e~ 162 (341)
T 3enk_A 85 FAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERAVKRIVFSSSATVYGVPERSPIDETFPLSATNPY--GQTKLMAEQ 162 (341)
T ss_dssp CCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGBCSCSSSSBCTTSCCBCSSHH--HHHHHHHHH
T ss_pred CccccccCccccChHHHHHHHHHHHHHHHHHHHhCCCCEEEEEecceEecCCCCCCCCCCCCCCCCChh--HHHHHHHHH
Confidence 8431 1345677788999999999988853221 1111122 223445566
Q ss_pred HHHh----C-CCCEEEEecCCcccCCC-------------------------CCccee-ee------cCCCCCCccCHHH
Q 021928 219 MLMA----S-GIPYTIIRTGVLQNTPG-------------------------GKQGFQ-FE------EGCAANGSLSKED 261 (305)
Q Consensus 219 ~l~~----~-gi~~tilRPg~l~~~~~-------------------------~~~~~~-~~------~~~~~~~~Is~~D 261 (305)
+++. . +++++++||+.+.+... ....+. ++ .++....+|+++|
T Consensus 163 ~~~~~~~~~~~~~~~~lRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~D 242 (341)
T 3enk_A 163 ILRDVEAADPSWRVATLRYFNPVGAHESGLIGEDPAGIPNNLMPYVAQVAVGKLEKLRVFGSDYPTPDGTGVRDYIHVVD 242 (341)
T ss_dssp HHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCSSHHHHHHHHHHTSSSCEEEECSCSSSTTSSCEECEEEHHH
T ss_pred HHHHHhhcCCCceEEEEeeccccCCccccccCCCcccCccchHHHHHHHHhcCCCceEEeCCccCCCCCCeeEeeEEHHH
Confidence 5543 3 59999999988553211 001111 12 3445568999999
Q ss_pred HHHHHHHHhhCC--CCCCcEEEEecCC-cCHHHHHHHHHHhhhhc
Q 021928 262 AAFICVEALESI--PQTGLIFEVVNGE-EKVSDWKKCFSRLMEKT 303 (305)
Q Consensus 262 vA~~iv~~l~~~--~~~~~~~~v~~g~-~s~~d~~~~~~~l~~~~ 303 (305)
+|++++.+++++ ...+++||+++++ .++.|+++.+.++.+++
T Consensus 243 va~a~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~ 287 (341)
T 3enk_A 243 LARGHIAALDALERRDASLTVNLGTGRGYSVLEVVRAFEKASGRA 287 (341)
T ss_dssp HHHHHHHHHHHHHHHTSCEEEEESCSCCEEHHHHHHHHHHHHCSC
T ss_pred HHHHHHHHHHhhhcCCcceEEEeCCCCceeHHHHHHHHHHHhCCC
Confidence 999999999863 3568999999876 59999999999998865
|
| >1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.91 E-value=7.4e-24 Score=192.54 Aligned_cols=203 Identities=15% Similarity=0.167 Sum_probs=151.3
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchh------h---hhcCCCcEEeecCCCCHHHHHHHhcCccEEEE
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA------M---ESFGTYVESMAGDASNKKFLKTALRGVRSIIC 168 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~------~---~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~ 168 (305)
+|+|+||||||+||++++++|+++|++|++++|+.... . .....+++++.+|+.|.+++.++++++|+|||
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~ 83 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKNVDVVIS 83 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHTCSEEEE
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHHhCCCEEEEeccCCHHHHHHHHcCCCEEEE
Confidence 57899999999999999999999999999999985321 1 11245799999999999999999999999999
Q ss_pred CCcc-------hHhhhhhhcC-CCEEEEEcccccccCC-CCcccccchHHHHHHHHHHHHHHhCCCCEEEEecCCcccC-
Q 021928 169 PSEG-------FISNAGSLKG-VQHVILLSQLSVYRGS-GGIQALMKGNARKLAEQDESMLMASGIPYTIIRTGVLQNT- 238 (305)
Q Consensus 169 ~~~g-------~~~~~a~~~g-v~~~V~iSS~~~~~~~-~~~~~~~~~~~~~~~~~aE~~l~~~gi~~tilRPg~l~~~- 238 (305)
+++. .+.+++++.+ ++|||+ |+.+..... ....+.. ... ..|..+|+++++.+++++++||+++.+.
T Consensus 84 ~a~~~~~~~~~~l~~aa~~~g~v~~~v~-S~~g~~~~~~~~~~p~~-~~y-~sK~~~e~~~~~~~~~~~~~r~~~~~~~~ 160 (308)
T 1qyc_A 84 TVGSLQIESQVNIIKAIKEVGTVKRFFP-SEFGNDVDNVHAVEPAK-SVF-EVKAKVRRAIEAEGIPYTYVSSNCFAGYF 160 (308)
T ss_dssp CCCGGGSGGGHHHHHHHHHHCCCSEEEC-SCCSSCTTSCCCCTTHH-HHH-HHHHHHHHHHHHHTCCBEEEECCEEHHHH
T ss_pred CCcchhhhhHHHHHHHHHhcCCCceEee-cccccCccccccCCcch-hHH-HHHHHHHHHHHhcCCCeEEEEeceecccc
Confidence 8442 2567788888 999984 655432211 1111110 112 3466788999999999999999986431
Q ss_pred ---CC-------CC-cceeeecCCCCCCccCHHHHHHHHHHHhhCCCCCCcEEEEecC-C-cCHHHHHHHHHHhhhhc
Q 021928 239 ---PG-------GK-QGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVVNG-E-EKVSDWKKCFSRLMEKT 303 (305)
Q Consensus 239 ---~~-------~~-~~~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~~~~~~~~v~~g-~-~s~~d~~~~~~~l~~~~ 303 (305)
.. .. ....++.++....+++++|+|++++.++.++...++.|++.++ + .++.|+++.+.+++|++
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~~~g~~~~~s~~e~~~~~~~~~g~~ 238 (308)
T 1qyc_A 161 LRSLAQAGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDPRTLNKTLYLRLPANTLSLNELVALWEKKIDKT 238 (308)
T ss_dssp TTTTTCTTCSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTSSCGGGTTEEEECCCGGGEEEHHHHHHHHHHHTTSC
T ss_pred ccccccccccCCCCCceEEecCCCceEEEecHHHHHHHHHHHHhCccccCeEEEEeCCCCccCHHHHHHHHHHHhCCC
Confidence 10 11 1122234455678899999999999999887667888998753 3 68999999999999875
|
| >2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.91 E-value=2.3e-23 Score=191.12 Aligned_cols=204 Identities=14% Similarity=0.174 Sum_probs=149.2
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhc--CccEEEECCcc---
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--GVRSIICPSEG--- 172 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~--~~d~Vi~~~~g--- 172 (305)
||+||||||+|+||++++++|+++|++|++++|+.....+.+..+++++.+|+.|.+++.++++ ++|+|||+++.
T Consensus 1 M~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vih~a~~~~~ 80 (330)
T 2c20_A 1 MNSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHEDAITEGAKFYNGDLRDKAFLRDVFTQENIEAVMHFAADSLV 80 (330)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSCTTSEEEECCTTCHHHHHHHHHHSCEEEEEECCCCCCH
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCchhhcCCCcEEEECCCCCHHHHHHHHhhcCCCEEEECCcccCc
Confidence 4799999999999999999999999999999997654333344478999999999999999998 99999998431
Q ss_pred -------------------hHhhhhhhcCCCEEEEEcccccccCCCC--------cccccchHHHHHHHHHHHHHHh---
Q 021928 173 -------------------FISNAGSLKGVQHVILLSQLSVYRGSGG--------IQALMKGNARKLAEQDESMLMA--- 222 (305)
Q Consensus 173 -------------------~~~~~a~~~gv~~~V~iSS~~~~~~~~~--------~~~~~~~~~~~~~~~aE~~l~~--- 222 (305)
.+.+++++.++++||++||.++|..... ..+...| ...|..+|.+++.
T Consensus 81 ~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~~~~~~~~~E~~~~~~~~~Y--~~sK~~~e~~~~~~~~ 158 (330)
T 2c20_A 81 GVSMEKPLQYYNNNVYGALCLLEVMDEFKVDKFIFSSTAATYGEVDVDLITEETMTNPTNTY--GETKLAIEKMLHWYSQ 158 (330)
T ss_dssp HHHHHSHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGGCSCSSSSBCTTSCCCCSSHH--HHHHHHHHHHHHHHHH
T ss_pred cccccCHHHHHHHHhHHHHHHHHHHHHcCCCEEEEeCCceeeCCCCCCCCCcCCCCCCCChH--HHHHHHHHHHHHHHHH
Confidence 1345567789999999999998864221 1111122 2234455665543
Q ss_pred -CCCCEEEEecCCcccCCC------------------------CCcceee-e------cCCCCCCccCHHHHHHHHHHHh
Q 021928 223 -SGIPYTIIRTGVLQNTPG------------------------GKQGFQF-E------EGCAANGSLSKEDAAFICVEAL 270 (305)
Q Consensus 223 -~gi~~tilRPg~l~~~~~------------------------~~~~~~~-~------~~~~~~~~Is~~DvA~~iv~~l 270 (305)
.+++++++||+.+.+... ....+.+ + .++....+|+++|+|++++.++
T Consensus 159 ~~~~~~~ilrp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~v~Dva~a~~~~~ 238 (330)
T 2c20_A 159 ASNLRYKIFRYFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDGTCIRDYIHVEDLVAAHFLGL 238 (330)
T ss_dssp TSSCEEEEEECSEEECCCTTCSSCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCCSSSSSSCEECEEEHHHHHHHHHHHH
T ss_pred HhCCcEEEEecCcccCCCCcCccccccccccchHHHHHHHHhhcCCCeEEeCCccccCCCceeEeeEeHHHHHHHHHHHH
Confidence 589999999988553210 0011111 1 2334467899999999999999
Q ss_pred hCCCC--CCcEEEEecCC-cCHHHHHHHHHHhhhhc
Q 021928 271 ESIPQ--TGLIFEVVNGE-EKVSDWKKCFSRLMEKT 303 (305)
Q Consensus 271 ~~~~~--~~~~~~v~~g~-~s~~d~~~~~~~l~~~~ 303 (305)
+++.. .+++||+++++ .++.|+++.+.++.+.+
T Consensus 239 ~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~ 274 (330)
T 2c20_A 239 KDLQNGGESDFYNLGNGNGFSVKEIVDAVREVTNHE 274 (330)
T ss_dssp HHHHTTCCCEEEECCCTTCBCHHHHHHHHHHHTTSC
T ss_pred hccccCCCCCeEEeCCCCCccHHHHHHHHHHHhCCC
Confidence 86532 36899999865 69999999999988764
|
| >2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=2.6e-23 Score=195.04 Aligned_cols=203 Identities=11% Similarity=0.062 Sum_probs=147.5
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCC-CeEEEEEcCcchhhhhc--CCCcEEeecCCCCHHHHHHHhcCccEEEECCcc-
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAMESF--GTYVESMAGDASNKKFLKTALRGVRSIICPSEG- 172 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~R~~~~~~~~~--~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~g- 172 (305)
.+|+||||||+|+||++++++|+++| ++|++++|++....+.+ ..+++++.+|+.|.+++.++++++|+|||+++.
T Consensus 31 ~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~l~~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vih~A~~~ 110 (377)
T 2q1s_A 31 ANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKINVPDHPAVRFSETSITDDALLASLQDEYDYVFHLATYH 110 (377)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGGGSCCCTTEEEECSCTTCHHHHHHCCSCCSEEEECCCCS
T ss_pred CCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchhhccCCCceEEEECCCCCHHHHHHHhhCCCEEEECCCcc
Confidence 45899999999999999999999999 99999999875533222 357899999999999999999999999998431
Q ss_pred ---------------------hHhhhhhhc-CCCEEEEEcccccccCCC-------------Cc-ccccchHHHHHHHHH
Q 021928 173 ---------------------FISNAGSLK-GVQHVILLSQLSVYRGSG-------------GI-QALMKGNARKLAEQD 216 (305)
Q Consensus 173 ---------------------~~~~~a~~~-gv~~~V~iSS~~~~~~~~-------------~~-~~~~~~~~~~~~~~a 216 (305)
.+.+++++. ++++||++||..+|.... +. .+... +...|..+
T Consensus 111 ~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~V~~SS~~vyg~~~~~~~~~~E~~~~~~~~~~~~~--Y~~sK~~~ 188 (377)
T 2q1s_A 111 GNQSSIHDPLADHENNTLTTLKLYERLKHFKRLKKVVYSAAGCSIAEKTFDDAKATEETDIVSLHNNDSP--YSMSKIFG 188 (377)
T ss_dssp CHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSSCCEEEEEEEC--------------CCCCCCCSSCCCSH--HHHHHHHH
T ss_pred CchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCCHHHcCCCCCCCcCcccccccccccCCCCc--hHHHHHHH
Confidence 034556777 899999999998875311 11 11112 22234456
Q ss_pred HHHHHh----CCCCEEEEecCCcccCCC---------C------------------Ccce-eeecCCCCCCccCHHHHHH
Q 021928 217 ESMLMA----SGIPYTIIRTGVLQNTPG---------G------------------KQGF-QFEEGCAANGSLSKEDAAF 264 (305)
Q Consensus 217 E~~l~~----~gi~~tilRPg~l~~~~~---------~------------------~~~~-~~~~~~~~~~~Is~~DvA~ 264 (305)
|.+++. .++++++|||+.+.+... . +..+ .++.++....+|+++|+|+
T Consensus 189 E~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~ 268 (377)
T 2q1s_A 189 EFYSVYYHKQHQLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYKALKGMPLPLENGGVATRDFIFVEDVAN 268 (377)
T ss_dssp HHHHHHHHHHHCCCEEEEEECCEECTTCCTTCSSCCSSGGGTSCSHHHHHHHHHHTTCCCCCSGGGCCEECCEEHHHHHH
T ss_pred HHHHHHHHHHhCCCEEEEeeccEECCCCcccccccccCcccccccHHHHHHHHHHcCCCeEEeCCCCeEEeeEEHHHHHH
Confidence 666543 599999999999654322 1 1111 1123344568899999999
Q ss_pred H-HHHHhhCCCCCCcEEEEecCC-cCHHHHHHHHHHhhhhc
Q 021928 265 I-CVEALESIPQTGLIFEVVNGE-EKVSDWKKCFSRLMEKT 303 (305)
Q Consensus 265 ~-iv~~l~~~~~~~~~~~v~~g~-~s~~d~~~~~~~l~~~~ 303 (305)
+ ++.+++++. .+ +|++++++ .++.|+++.+.++.+.+
T Consensus 269 a~i~~~~~~~~-~g-~~~i~~~~~~s~~e~~~~i~~~~g~~ 307 (377)
T 2q1s_A 269 GLIACAADGTP-GG-VYNIASGKETSIADLATKINEITGNN 307 (377)
T ss_dssp HHHHHHHHCCT-TE-EEECCCCCCEEHHHHHHHHHHHHTCC
T ss_pred HHHHHHHhcCC-CC-eEEecCCCceeHHHHHHHHHHHhCCC
Confidence 9 999998765 56 99999875 68999999999998864
|
| >2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus} | Back alignment and structure |
|---|
Probab=99.91 E-value=1.3e-23 Score=191.92 Aligned_cols=202 Identities=10% Similarity=0.018 Sum_probs=147.7
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcC--ccEEEECCcc
Q 021928 95 PEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRG--VRSIICPSEG 172 (305)
Q Consensus 95 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~--~d~Vi~~~~g 172 (305)
..+.|+||||||+|+||++++++|+++|++|++++|++.. .. + +++++.+|+.|.+++.+++++ +|+|||+++.
T Consensus 9 ~~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~-l--~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~ 84 (321)
T 2pk3_A 9 HHGSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-KL-P--NVEMISLDIMDSQRVKKVISDIKPDYIFHLAAK 84 (321)
T ss_dssp ----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-CC-T--TEEEEECCTTCHHHHHHHHHHHCCSEEEECCSC
T ss_pred ccCcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-cc-c--eeeEEECCCCCHHHHHHHHHhcCCCEEEEcCcc
Confidence 3457999999999999999999999999999999998755 22 2 689999999999999999986 8999998431
Q ss_pred ----------------------hHhhhhhhc-CCCEEEEEcccccccCC--C--------CcccccchHHHHHHHHHHHH
Q 021928 173 ----------------------FISNAGSLK-GVQHVILLSQLSVYRGS--G--------GIQALMKGNARKLAEQDESM 219 (305)
Q Consensus 173 ----------------------~~~~~a~~~-gv~~~V~iSS~~~~~~~--~--------~~~~~~~~~~~~~~~~aE~~ 219 (305)
.+.+++++. ++++||++||..+|... . ...+...| ...|..+|.+
T Consensus 85 ~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~E~~~~~~~~~Y--~~sK~~~E~~ 162 (321)
T 2pk3_A 85 SSVKDSWLNKKGTFSTNVFGTLHVLDAVRDSNLDCRILTIGSSEEYGMILPEESPVSEENQLRPMSPY--GVSKASVGML 162 (321)
T ss_dssp CCHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEEGGGTBSCCGGGCSBCTTSCCBCCSHH--HHHHHHHHHH
T ss_pred cchhhhhhcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEccHHhcCCCCCCCCCCCCCCCCCCCCcc--HHHHHHHHHH
Confidence 033455554 68999999999887643 0 11112222 2234456666
Q ss_pred HHh----CCCCEEEEecCCcccCCCC-----------------C--cc-eeeecCCCCCCccCHHHHHHHHHHHhhCCCC
Q 021928 220 LMA----SGIPYTIIRTGVLQNTPGG-----------------K--QG-FQFEEGCAANGSLSKEDAAFICVEALESIPQ 275 (305)
Q Consensus 220 l~~----~gi~~tilRPg~l~~~~~~-----------------~--~~-~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~~ 275 (305)
++. .+++++++||+.+.+.... + .. ..++.++....+++++|+|++++.++.++ .
T Consensus 163 ~~~~~~~~gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~-~ 241 (321)
T 2pk3_A 163 ARQYVKAYGMDIIHTRTFNHIGPGQSLGFVTQDFAKQIVDIEMEKQEPIIKVGNLEAVRDFTDVRDIVQAYWLLSQYG-K 241 (321)
T ss_dssp HHHHHHHHCCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHHTTSSCSEEEESCSSCEEEEEEHHHHHHHHHHHHHHC-C
T ss_pred HHHHHHHcCCCEEEEEeCcccCcCCCCCchHHHHHHHHHHHhcCCCCCeEEeCCCCcEEeeEEHHHHHHHHHHHHhCC-C
Confidence 554 4999999999996543211 1 11 12233444567899999999999999866 4
Q ss_pred CCcEEEEecCC-cCHHHHHHHHHHhhhhc
Q 021928 276 TGLIFEVVNGE-EKVSDWKKCFSRLMEKT 303 (305)
Q Consensus 276 ~~~~~~v~~g~-~s~~d~~~~~~~l~~~~ 303 (305)
.+++|+++++. .++.|+++.+.+..+.+
T Consensus 242 ~g~~~~i~~~~~~s~~e~~~~i~~~~g~~ 270 (321)
T 2pk3_A 242 TGDVYNVCSGIGTRIQDVLDLLLAMANVK 270 (321)
T ss_dssp TTCEEEESCSCEEEHHHHHHHHHHHSSSC
T ss_pred CCCeEEeCCCCCeeHHHHHHHHHHHhCCC
Confidence 57899999875 58999999999988764
|
| >3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} | Back alignment and structure |
|---|
Probab=99.91 E-value=1e-23 Score=193.06 Aligned_cols=204 Identities=11% Similarity=0.068 Sum_probs=151.7
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCc-c-----hhhh---hcCCCcEEeecCCCCHHHHHHHhcCccEEE
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK-R-----NAME---SFGTYVESMAGDASNKKFLKTALRGVRSII 167 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~-~-----~~~~---~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi 167 (305)
++|+|+||||+|+||++++++|+++|++|++++|++ . +... ....+++++.+|+.|.+++.++++++|+||
T Consensus 3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D~~d~~~l~~a~~~~d~vi 82 (321)
T 3c1o_A 3 HMEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEMEEHEKMVSVLKQVDIVI 82 (321)
T ss_dssp -CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEE
T ss_pred cccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhcCCcEEEEecCCCHHHHHHHHcCCCEEE
Confidence 358899999999999999999999999999999986 2 2111 123568999999999999999999999999
Q ss_pred ECCcc-------hHhhhhhhcC-CCEEEEEcccccccCC-CCcccccchHHHHHHHHHHHHHHhCCCCEEEEecCCcccC
Q 021928 168 CPSEG-------FISNAGSLKG-VQHVILLSQLSVYRGS-GGIQALMKGNARKLAEQDESMLMASGIPYTIIRTGVLQNT 238 (305)
Q Consensus 168 ~~~~g-------~~~~~a~~~g-v~~~V~iSS~~~~~~~-~~~~~~~~~~~~~~~~~aE~~l~~~gi~~tilRPg~l~~~ 238 (305)
|+++. .+.+++++.+ ++|||+ |+.+..... ....+. ...+ ..|..+|+++++.++++++|||+++.+.
T Consensus 83 ~~a~~~~~~~~~~l~~aa~~~g~v~~~v~-S~~g~~~~~~~~~~p~-~~~y-~sK~~~e~~~~~~~~~~~~lrp~~~~~~ 159 (321)
T 3c1o_A 83 SALPFPMISSQIHIINAIKAAGNIKRFLP-SDFGCEEDRIKPLPPF-ESVL-EKKRIIRRAIEAAALPYTYVSANCFGAY 159 (321)
T ss_dssp ECCCGGGSGGGHHHHHHHHHHCCCCEEEC-SCCSSCGGGCCCCHHH-HHHH-HHHHHHHHHHHHHTCCBEEEECCEEHHH
T ss_pred ECCCccchhhHHHHHHHHHHhCCccEEec-cccccCccccccCCCc-chHH-HHHHHHHHHHHHcCCCeEEEEeceeccc
Confidence 98442 2667788888 999983 544322110 111110 0112 4466788999999999999999986532
Q ss_pred C------------CCCcceeeecCCCCCCccCHHHHHHHHHHHhhCCCCCCcEEEEec-CC-cCHHHHHHHHHHhhhhc
Q 021928 239 P------------GGKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVVN-GE-EKVSDWKKCFSRLMEKT 303 (305)
Q Consensus 239 ~------------~~~~~~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~~~~~~~~v~~-g~-~s~~d~~~~~~~l~~~~ 303 (305)
. ..+....++.++....+++++|+|++++.++.++...++.|++.+ ++ .++.|+++.+.++.|++
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~g~~~~~~g~~~~~t~~e~~~~~~~~~g~~ 238 (321)
T 3c1o_A 160 FVNYLLHPSPHPNRNDDIVIYGTGETKFVLNYEEDIAKYTIKVACDPRCCNRIVIYRPPKNIISQNELISLWEAKSGLS 238 (321)
T ss_dssp HHHHHHCCCSSCCTTSCEEEETTSCCEEEEECHHHHHHHHHHHHHCGGGTTEEEECCCGGGEEEHHHHHHHHHHHHTSC
T ss_pred cccccccccccccccCceEEecCCCcceeEeeHHHHHHHHHHHHhCccccCeEEEEeCCCCcccHHHHHHHHHHHcCCc
Confidence 1 111222234455667899999999999999998777788899885 33 58999999999999875
|
| >2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=4.2e-23 Score=190.04 Aligned_cols=202 Identities=16% Similarity=0.190 Sum_probs=152.0
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcC--CCcEEeecCCCCHHHHHHHhc--CccEEEECCc
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG--TYVESMAGDASNKKFLKTALR--GVRSIICPSE 171 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~--~~v~~v~~D~~d~~~~~~~~~--~~d~Vi~~~~ 171 (305)
..+|+||||||+|+||++++++|+++|++|++++|+.....+... .+++++.+|+.|.+++.++++ ++|+|||+++
T Consensus 18 ~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~l~~v~~~~~Dl~d~~~~~~~~~~~~~D~vih~A~ 97 (330)
T 2pzm_A 18 GSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPVAGLSVIEGSVTDAGLLERAFDSFKPTHVVHSAA 97 (330)
T ss_dssp TTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCSCTTEEEEECCTTCHHHHHHHHHHHCCSEEEECCC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhccCCceEEEeeCCCHHHHHHHHhhcCCCEEEECCc
Confidence 345899999999999999999999999999999997644321111 468999999999999999999 9999999843
Q ss_pred c-------------------hHhhhhhhcCCCEEEEEcccccccCCCCc--c------cccchHHHHHHHHHHHHHHhCC
Q 021928 172 G-------------------FISNAGSLKGVQHVILLSQLSVYRGSGGI--Q------ALMKGNARKLAEQDESMLMASG 224 (305)
Q Consensus 172 g-------------------~~~~~a~~~gv~~~V~iSS~~~~~~~~~~--~------~~~~~~~~~~~~~aE~~l~~~g 224 (305)
. .+.+++.+.++++||++||.++|...... . +...| ...|..+|.+++..+
T Consensus 98 ~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~~~~~~~~~~~~~~E~~~~~~~Y--~~sK~~~e~~~~~~~ 175 (330)
T 2pzm_A 98 AYKDPDDWAEDAATNVQGSINVAKAASKAGVKRLLNFQTALCYGRPATVPIPIDSPTAPFTSY--GISKTAGEAFLMMSD 175 (330)
T ss_dssp CCSCTTCHHHHHHHHTHHHHHHHHHHHHHTCSEEEEEEEGGGGCSCSSSSBCTTCCCCCCSHH--HHHHHHHHHHHHTCS
T ss_pred cCCCccccChhHHHHHHHHHHHHHHHHHcCCCEEEEecCHHHhCCCccCCCCcCCCCCCCChH--HHHHHHHHHHHHHcC
Confidence 1 13455667889999999999988653211 0 11222 223556788888889
Q ss_pred CCEEEEecCCccc-CCCC------------CcceeeecCCCCCCccCHHHHHH-HHHHHhhCCCCCCcEEEEecCC-cCH
Q 021928 225 IPYTIIRTGVLQN-TPGG------------KQGFQFEEGCAANGSLSKEDAAF-ICVEALESIPQTGLIFEVVNGE-EKV 289 (305)
Q Consensus 225 i~~tilRPg~l~~-~~~~------------~~~~~~~~~~~~~~~Is~~DvA~-~iv~~l~~~~~~~~~~~v~~g~-~s~ 289 (305)
+++++|||+.+.+ .... +. ..++.+. ...+++++|+|+ +++.+++++. +++|+++++. .++
T Consensus 176 ~~~~~iR~~~v~gp~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~i~~~Dva~~a~~~~~~~~~--g~~~~v~~~~~~s~ 251 (330)
T 2pzm_A 176 VPVVSLRLANVTGPRLAIGPIPTFYKRLKAGQ-KCFCSDT-VRDFLDMSDFLAIADLSLQEGRP--TGVFNVSTGEGHSI 251 (330)
T ss_dssp SCEEEEEECEEECTTCCSSHHHHHHHHHHTTC-CCCEESC-EECEEEHHHHHHHHHHHTSTTCC--CEEEEESCSCCEEH
T ss_pred CCEEEEeeeeeECcCCCCCHHHHHHHHHHcCC-EEeCCCC-EecceeHHHHHHHHHHHHhhcCC--CCEEEeCCCCCCCH
Confidence 9999999988543 2210 11 1122333 567899999999 9999998754 8999999875 589
Q ss_pred HHHHHHHHHhhhhc
Q 021928 290 SDWKKCFSRLMEKT 303 (305)
Q Consensus 290 ~d~~~~~~~l~~~~ 303 (305)
.|+++.+.+..+.+
T Consensus 252 ~e~~~~i~~~~g~~ 265 (330)
T 2pzm_A 252 KEVFDVVLDYVGAT 265 (330)
T ss_dssp HHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHhCCC
Confidence 99999999988764
|
| >1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=4.7e-23 Score=191.29 Aligned_cols=205 Identities=12% Similarity=0.037 Sum_probs=149.5
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh-----cCCCcEEeecCCCCHHHHHHHhcC--ccEEEEC
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-----FGTYVESMAGDASNKKFLKTALRG--VRSIICP 169 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~-----~~~~v~~v~~D~~d~~~~~~~~~~--~d~Vi~~ 169 (305)
.+|+||||||+|+||++++++|+++|++|++++|++.+.... ...+++++.+|+.|.+++.+++++ +|+|||+
T Consensus 8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~ 87 (357)
T 1rkx_A 8 QGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREFQPEIVFHM 87 (357)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred CCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhccCCceEEEEccccCHHHHHHHHHhcCCCEEEEC
Confidence 358999999999999999999999999999999987553221 134789999999999999999987 8999998
Q ss_pred Ccc----------------------hHhhhhhhcC-CCEEEEEcccccccCCCC---------cccccchHHHHHHHHHH
Q 021928 170 SEG----------------------FISNAGSLKG-VQHVILLSQLSVYRGSGG---------IQALMKGNARKLAEQDE 217 (305)
Q Consensus 170 ~~g----------------------~~~~~a~~~g-v~~~V~iSS~~~~~~~~~---------~~~~~~~~~~~~~~~aE 217 (305)
++. .+.+++.+.+ +++||++||..+|..... ..+...| ...|..+|
T Consensus 88 A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~E~~~~~~~~~Y--~~sK~~~e 165 (357)
T 1rkx_A 88 AAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWIWGYRENEAMGGYDPY--SNSKGCAE 165 (357)
T ss_dssp CSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCSSSCBCTTSCBCCSSHH--HHHHHHHH
T ss_pred CCCcccccchhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEecCHHHhCCCCcCCCCCCCCCCCCCCcc--HHHHHHHH
Confidence 441 0344555565 899999999988764321 1111222 22344556
Q ss_pred HHHHh-------------CCCCEEEEecCCcccCCC---------------CCcceeeecCCCCCCccCHHHHHHHHHHH
Q 021928 218 SMLMA-------------SGIPYTIIRTGVLQNTPG---------------GKQGFQFEEGCAANGSLSKEDAAFICVEA 269 (305)
Q Consensus 218 ~~l~~-------------~gi~~tilRPg~l~~~~~---------------~~~~~~~~~~~~~~~~Is~~DvA~~iv~~ 269 (305)
.+++. .+++++++||+.+.+... .+....+..++....+|+++|+|++++.+
T Consensus 166 ~~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~v~v~Dva~a~~~~ 245 (357)
T 1rkx_A 166 LVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVIIRNPHAIRPWQHVLEPLSGYLLL 245 (357)
T ss_dssp HHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCEECSCTTCEECCEETHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhhccccCCceEEEEeeceeeCCCCCccccHHHHHHHHHhcCCCEEECCCCCeeccEeHHHHHHHHHHH
Confidence 55543 299999999999654321 11222233344456899999999999999
Q ss_pred hhC----CCCCCcEEEEecC---CcCHHHHHHHHHHhhhhc
Q 021928 270 LES----IPQTGLIFEVVNG---EEKVSDWKKCFSRLMEKT 303 (305)
Q Consensus 270 l~~----~~~~~~~~~v~~g---~~s~~d~~~~~~~l~~~~ 303 (305)
++. +...+++|+++++ ..++.|+++.+.+..+.+
T Consensus 246 ~~~~~~~~~~~~~~~ni~~~~~~~~s~~e~~~~i~~~~g~~ 286 (357)
T 1rkx_A 246 AQKLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWGEG 286 (357)
T ss_dssp HHHHHHTCGGGCSEEECCCCGGGCEEHHHHHHHHHHHHCTT
T ss_pred HHhhhhcCCCCCceEEECCCCCCcccHHHHHHHHHHHhCCC
Confidence 874 2345789999975 358999999999988764
|
| >2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A | Back alignment and structure |
|---|
Probab=99.91 E-value=7.8e-23 Score=188.29 Aligned_cols=204 Identities=13% Similarity=0.081 Sum_probs=148.4
Q ss_pred CEEEEEcCCChHHHHHHHHHHhC-CCeEEEEEcCcchhhhhc-CCCcEEeecCCCC-HHHHHHHhcCccEEEECCc--c-
Q 021928 99 DAVLVTDGDSDIGQMVILSLIVK-RTRIKALVKDKRNAMESF-GTYVESMAGDASN-KKFLKTALRGVRSIICPSE--G- 172 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~R~~~~~~~~~-~~~v~~v~~D~~d-~~~~~~~~~~~d~Vi~~~~--g- 172 (305)
|+||||||+|+||++++++|+++ |++|++++|++.+..... ..+++++.+|+.| .+.+.++++++|+|||+++ .
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~d~vih~A~~~~~ 80 (345)
T 2bll_A 1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLVAIATP 80 (345)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTCSHHHHHHHHHCSEEEECBCCCCH
T ss_pred CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhhcCCCeEEEeccccCcHHHHHhhccCCCEEEEcccccCc
Confidence 68999999999999999999998 899999999887654332 2478999999998 4678889999999999732 1
Q ss_pred -------------------hHhhhhhhcCCCEEEEEcccccccCCCCcc-----------cc--cchHHHHHHHHHHHHH
Q 021928 173 -------------------FISNAGSLKGVQHVILLSQLSVYRGSGGIQ-----------AL--MKGNARKLAEQDESML 220 (305)
Q Consensus 173 -------------------~~~~~a~~~gv~~~V~iSS~~~~~~~~~~~-----------~~--~~~~~~~~~~~aE~~l 220 (305)
.+.+++++.+ ++||++||.++|....... +. ....+...|..+|.++
T Consensus 81 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~v~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~e~~~ 159 (345)
T 2bll_A 81 IEYTRNPLRVFELDFEENLRIIRYCVKYR-KRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVI 159 (345)
T ss_dssp HHHHHSHHHHHHHHTHHHHHHHHHHHHTT-CEEEEECCGGGGBTCCCSSBCTTTCCCBCCCTTCGGGHHHHHHHHHHHHH
T ss_pred cchhcCHHHHHHHHHHHHHHHHHHHHHhC-CeEEEEecHHHcCCCCCCCcCCcccccccCcccCcccccHHHHHHHHHHH
Confidence 1344566677 8999999998886422110 00 0001222344556655
Q ss_pred H----hCCCCEEEEecCCcccCCCC----------------------Ccce-eeecCCCCCCccCHHHHHHHHHHHhhCC
Q 021928 221 M----ASGIPYTIIRTGVLQNTPGG----------------------KQGF-QFEEGCAANGSLSKEDAAFICVEALESI 273 (305)
Q Consensus 221 ~----~~gi~~tilRPg~l~~~~~~----------------------~~~~-~~~~~~~~~~~Is~~DvA~~iv~~l~~~ 273 (305)
+ +.+++++++||+.+.+.... +... .++.++....+++++|+|++++.+++++
T Consensus 160 ~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~ 239 (345)
T 2bll_A 160 WAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRIIENA 239 (345)
T ss_dssp HHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEHHHHHHHHHHHHHCG
T ss_pred HHHHHhcCCCEEEEcCCcccCCCcccccccccccccHHHHHHHHHHcCCCcEEECCCCEEEEEEEHHHHHHHHHHHHhhc
Confidence 3 46999999999996533210 1111 1223445567999999999999999876
Q ss_pred C--CCCcEEEEecCC--cCHHHHHHHHHHhhhhc
Q 021928 274 P--QTGLIFEVVNGE--EKVSDWKKCFSRLMEKT 303 (305)
Q Consensus 274 ~--~~~~~~~v~~g~--~s~~d~~~~~~~l~~~~ 303 (305)
. ..+++|++++++ .++.|+++.+.+..+.+
T Consensus 240 ~~~~~g~~~~i~~~~~~~s~~e~~~~i~~~~g~~ 273 (345)
T 2bll_A 240 GNRCDGEIINIGNPENEASIEELGEMLLASFEKH 273 (345)
T ss_dssp GGTTTTEEEEECCTTSEEEHHHHHHHHHHHHHTC
T ss_pred cccCCCceEEeCCCCCCCCHHHHHHHHHHHhCCC
Confidence 4 467899999874 68999999999988764
|
| >1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.90 E-value=8.8e-23 Score=188.09 Aligned_cols=204 Identities=14% Similarity=0.060 Sum_probs=147.3
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcch-----hhhhc-CCCcEEeecCCCCHHHHHHHhcC--ccEEEEC
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-----AMESF-GTYVESMAGDASNKKFLKTALRG--VRSIICP 169 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~-----~~~~~-~~~v~~v~~D~~d~~~~~~~~~~--~d~Vi~~ 169 (305)
||+||||||+||||++++++|+++|++|++++|.... ..... ..+++++.+|+.|.+++.+++++ +|+|||+
T Consensus 1 M~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~ 80 (347)
T 1orr_A 1 MAKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKYMPDSCFHL 80 (347)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred CcEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhccCCceEEEEcCCCCHHHHHHHHhccCCCEEEEC
Confidence 4799999999999999999999999999999985321 11111 23589999999999999999998 9999998
Q ss_pred Ccc----------------------hHhhhhhhcCCC-EEEEEcccccccCCCC------------------------cc
Q 021928 170 SEG----------------------FISNAGSLKGVQ-HVILLSQLSVYRGSGG------------------------IQ 202 (305)
Q Consensus 170 ~~g----------------------~~~~~a~~~gv~-~~V~iSS~~~~~~~~~------------------------~~ 202 (305)
++. .+.+++.+.+++ +||++||.++|..... ..
T Consensus 81 A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~ 160 (347)
T 1orr_A 81 AGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLD 160 (347)
T ss_dssp CCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCTTSCCC
T ss_pred CcccChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEeccHHHhCCCCcCCcccccccccccccccCccccCCCC
Confidence 431 134556777886 9999999988763211 11
Q ss_pred cccchHHHHHHHHHHHHHHh----CCCCEEEEecCCcccCCCC-----------------Cc-----ce-eeecCCCCCC
Q 021928 203 ALMKGNARKLAEQDESMLMA----SGIPYTIIRTGVLQNTPGG-----------------KQ-----GF-QFEEGCAANG 255 (305)
Q Consensus 203 ~~~~~~~~~~~~~aE~~l~~----~gi~~tilRPg~l~~~~~~-----------------~~-----~~-~~~~~~~~~~ 255 (305)
+... +...|..+|.+++. .++++++|||+.+.+.... +. .. .++.++....
T Consensus 161 ~~~~--Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~ 238 (347)
T 1orr_A 161 FHSP--YGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVRD 238 (347)
T ss_dssp CCHH--HHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCEEEESSSCCEEE
T ss_pred CCCc--hHHHHHHHHHHHHHHHHHhCCcEEEEccCceeCcCCCCCCcCcHHHHHHHHHHhCcccCCCCeEEecCCcceEe
Confidence 1111 22234455666543 4899999999996543210 00 11 1233444567
Q ss_pred ccCHHHHHHHHHHHhhC-CCCCCcEEEEecCC---cCHHHHHHHHHHhhhhc
Q 021928 256 SLSKEDAAFICVEALES-IPQTGLIFEVVNGE---EKVSDWKKCFSRLMEKT 303 (305)
Q Consensus 256 ~Is~~DvA~~iv~~l~~-~~~~~~~~~v~~g~---~s~~d~~~~~~~l~~~~ 303 (305)
+++++|+|++++.++++ +...+++|+++++. .++.|+++.+.++.+.+
T Consensus 239 ~i~v~Dva~a~~~~~~~~~~~~g~~~~v~~~~~~~~s~~e~~~~i~~~~g~~ 290 (347)
T 1orr_A 239 VLHAEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNID 290 (347)
T ss_dssp CEEHHHHHHHHHHHHHTHHHHTTCEEEESSCGGGEEEHHHHHHHHHHHHTCC
T ss_pred eEEHHHHHHHHHHHHhccccCCCCEEEeCCCCCCCccHHHHHHHHHHHhCCC
Confidence 89999999999999986 23467899999875 68999999999998764
|
| >1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=1.9e-22 Score=186.33 Aligned_cols=202 Identities=13% Similarity=0.080 Sum_probs=147.9
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhC--CCeEEEEEcCcch-----hhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEECC
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVK--RTRIKALVKDKRN-----AMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS 170 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~R~~~~-----~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~ 170 (305)
||+||||||+|+||++++++|+++ |++|++++|++.. ..+....+++++.+|++|.+++.++++++|+|||++
T Consensus 4 m~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A 83 (348)
T 1oc2_A 4 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKLAAKADAIVHYA 83 (348)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHHHHTTCSEEEECC
T ss_pred CcEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHhhhccCCeEEEECCCCCHHHHHHHhhcCCEEEECC
Confidence 589999999999999999999998 8999999997531 112223578999999999999999999999999984
Q ss_pred cc----------------------hHhhhhhhcCCCEEEEEcccccccCCC--------------------CcccccchH
Q 021928 171 EG----------------------FISNAGSLKGVQHVILLSQLSVYRGSG--------------------GIQALMKGN 208 (305)
Q Consensus 171 ~g----------------------~~~~~a~~~gv~~~V~iSS~~~~~~~~--------------------~~~~~~~~~ 208 (305)
+. .+.+++.+.++ +||++||..+|.... +..+...|
T Consensus 84 ~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~-~~v~~SS~~vyg~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~Y- 161 (348)
T 1oc2_A 84 AESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDI-RFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPY- 161 (348)
T ss_dssp SCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTSCCCCCSHH-
T ss_pred cccCccchhhCHHHHHHHHHHHHHHHHHHHHHhCC-eEEEecccceeCCCcccccccccccccCCCcCCCCCCCCCCcc-
Confidence 31 13455666787 999999998875321 11111122
Q ss_pred HHHHHHHHHHHHH----hCCCCEEEEecCCcccCCCC--------------Ccce-eeecCCCCCCccCHHHHHHHHHHH
Q 021928 209 ARKLAEQDESMLM----ASGIPYTIIRTGVLQNTPGG--------------KQGF-QFEEGCAANGSLSKEDAAFICVEA 269 (305)
Q Consensus 209 ~~~~~~~aE~~l~----~~gi~~tilRPg~l~~~~~~--------------~~~~-~~~~~~~~~~~Is~~DvA~~iv~~ 269 (305)
...|..+|.+++ +.++++++|||+.+.+.... +... .++.+.....+++++|+|++++.+
T Consensus 162 -~~sK~~~e~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~ 240 (348)
T 1oc2_A 162 -SSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGVWAI 240 (348)
T ss_dssp -HHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCTTSHHHHHHHHHHHTCCCEEETTSCCEEECEEHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHHHHHHhCCCEEEEeeceeeCCCCCccchHHHHHHHHHcCCCceEecCCCceEeeEEHHHHHHHHHHH
Confidence 223444565554 35999999999996543211 1111 123344556899999999999999
Q ss_pred hhCCCCCCcEEEEecCC-cCHHHHHHHHHHhhhhc
Q 021928 270 LESIPQTGLIFEVVNGE-EKVSDWKKCFSRLMEKT 303 (305)
Q Consensus 270 l~~~~~~~~~~~v~~g~-~s~~d~~~~~~~l~~~~ 303 (305)
++++ ..+++|+++++. .++.|+++.+.+..+.+
T Consensus 241 ~~~~-~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~ 274 (348)
T 1oc2_A 241 LTKG-RMGETYLIGADGEKNNKEVLELILEKMGQP 274 (348)
T ss_dssp HHHC-CTTCEEEECCSCEEEHHHHHHHHHHHTTCC
T ss_pred hhCC-CCCCeEEeCCCCCCCHHHHHHHHHHHhCCC
Confidence 9765 457899999876 68999999999988764
|
| >2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=99.90 E-value=1.2e-22 Score=187.33 Aligned_cols=200 Identities=11% Similarity=0.096 Sum_probs=149.8
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcC--CCcEEeecCCCCHHHHHHHhcC--ccEEEECCc-
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG--TYVESMAGDASNKKFLKTALRG--VRSIICPSE- 171 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~--~~v~~v~~D~~d~~~~~~~~~~--~d~Vi~~~~- 171 (305)
.+|+||||||+|+||++++++|+++|++|++++|+.....+.+. .+++++.+|+.|.+++.+++++ +|+|||+++
T Consensus 20 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~vih~A~~ 99 (333)
T 2q1w_A 20 HMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREHLKDHPNLTFVEGSIADHALVNQLIGDLQPDAVVHTAAS 99 (333)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSCCCTTEEEEECCTTCHHHHHHHHHHHCCSEEEECCCC
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhhHhhcCCceEEEEeCCCHHHHHHHHhccCCcEEEECcee
Confidence 46899999999999999999999999999999998654322222 4689999999999999999998 999998832
Q ss_pred --c----------------hHhhhhhhcCCCEEEEEccccccc----CCCCc-----ccc-cchHHHHHHHHHHHHHHh-
Q 021928 172 --G----------------FISNAGSLKGVQHVILLSQLSVYR----GSGGI-----QAL-MKGNARKLAEQDESMLMA- 222 (305)
Q Consensus 172 --g----------------~~~~~a~~~gv~~~V~iSS~~~~~----~~~~~-----~~~-~~~~~~~~~~~aE~~l~~- 222 (305)
. .+.+++.+.++++||++||.++|. ....+ .+. ..| ...|..+|.+++.
T Consensus 100 ~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~~~g~~~~~~~~~~~E~~~p~~~~Y--~~sK~~~E~~~~~s 177 (333)
T 2q1w_A 100 YKDPDDWYNDTLTNCVGGSNVVQAAKKNNVGRFVYFQTALCYGVKPIQQPVRLDHPRNPANSSY--AISKSANEDYLEYS 177 (333)
T ss_dssp CSCTTCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGCSCCCSSSBCTTSCCCCTTCHH--HHHHHHHHHHHHHH
T ss_pred cCCCccCChHHHHHHHHHHHHHHHHHHhCCCEEEEECcHHHhCCCcccCCCCcCCCCCCCCCch--HHHHHHHHHHHHhh
Confidence 1 144556678899999999999886 32110 111 122 2235567888877
Q ss_pred CCCCEEEEecCCcccCCC-------------CCcceeeecCCCCCCccCHHHHHHHHHHHhhCCCCCCcEEEEecCC-cC
Q 021928 223 SGIPYTIIRTGVLQNTPG-------------GKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVVNGE-EK 288 (305)
Q Consensus 223 ~gi~~tilRPg~l~~~~~-------------~~~~~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~~~~~~~~v~~g~-~s 288 (305)
.. +++++||+.+.+... .+. ..++ ++....+++++|+|++++.+++++. +++|+++++. .+
T Consensus 178 ~~-~~~ilR~~~v~gp~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~i~v~Dva~ai~~~~~~~~--g~~~~v~~~~~~s 252 (333)
T 2q1w_A 178 GL-DFVTFRLANVVGPRNVSGPLPIFFQRLSEGK-KCFV-TKARRDFVFVKDLARATVRAVDGVG--HGAYHFSSGTDVA 252 (333)
T ss_dssp TC-CEEEEEESEEESTTCCSSHHHHHHHHHHTTC-CCEE-EECEECEEEHHHHHHHHHHHHTTCC--CEEEECSCSCCEE
T ss_pred hC-CeEEEeeceEECcCCcCcHHHHHHHHHHcCC-eeeC-CCceEeeEEHHHHHHHHHHHHhcCC--CCEEEeCCCCCcc
Confidence 55 999999997543221 011 1222 3445678999999999999998766 8999999865 58
Q ss_pred HHHHHHHHHHhhhhc
Q 021928 289 VSDWKKCFSRLMEKT 303 (305)
Q Consensus 289 ~~d~~~~~~~l~~~~ 303 (305)
+.|+++.+.++.+.+
T Consensus 253 ~~e~~~~i~~~~g~~ 267 (333)
T 2q1w_A 253 IKELYDAVVEAMALP 267 (333)
T ss_dssp HHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHHHhCCC
Confidence 999999999988764
|
| >2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=8.1e-23 Score=186.21 Aligned_cols=200 Identities=18% Similarity=0.153 Sum_probs=145.1
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhc--CccEEEECCcc----
Q 021928 99 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--GVRSIICPSEG---- 172 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~--~~d~Vi~~~~g---- 172 (305)
|+||||||+|+||++++++|+++|++|++++|......+....+++++.+|++|.+++.++++ ++|+|||+++.
T Consensus 1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~~a~~~~~~ 80 (311)
T 2p5y_A 1 MRVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKRENVPKGVPFFRVDLRDKEGVERAFREFRPTHVSHQAAQASVK 80 (311)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCGGGSCTTCCEECCCTTCHHHHHHHHHHHCCSEEEECCSCCCHH
T ss_pred CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCchhhcccCeEEEECCCCCHHHHHHHHHhcCCCEEEECccccCch
Confidence 589999999999999999999999999999985433222333568899999999999999998 89999998431
Q ss_pred ------------------hHhhhhhhcCCCEEEEEccc-ccccC-CC--C------cccccchHHHHHHHHHHHHHH---
Q 021928 173 ------------------FISNAGSLKGVQHVILLSQL-SVYRG-SG--G------IQALMKGNARKLAEQDESMLM--- 221 (305)
Q Consensus 173 ------------------~~~~~a~~~gv~~~V~iSS~-~~~~~-~~--~------~~~~~~~~~~~~~~~aE~~l~--- 221 (305)
.+.+++++.++++||++||. .+|.. .. . ..+...|.. .|..+|.+++
T Consensus 81 ~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~~g~~~~~~~~~E~~~~~~~~~Y~~--sK~~~e~~~~~~~ 158 (311)
T 2p5y_A 81 VSVEDPVLDFEVNLLGGLNLLEACRQYGVEKLVFASTGGAIYGEVPEGERAEETWPPRPKSPYAA--SKAAFEHYLSVYG 158 (311)
T ss_dssp HHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEHHHHHCCCCTTCCBCTTSCCCCCSHHHH--HHHHHHHHHHHHH
T ss_pred hhhhCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCChhhcCCCCCCCCcCCCCCCCCCChHHH--HHHHHHHHHHHHH
Confidence 13445677889999999998 66542 11 0 011122222 3444555553
Q ss_pred -hCCCCEEEEecCCcccCCCC-----------------Cccee-e-----ecCCCCCCccCHHHHHHHHHHHhhCCCCCC
Q 021928 222 -ASGIPYTIIRTGVLQNTPGG-----------------KQGFQ-F-----EEGCAANGSLSKEDAAFICVEALESIPQTG 277 (305)
Q Consensus 222 -~~gi~~tilRPg~l~~~~~~-----------------~~~~~-~-----~~~~~~~~~Is~~DvA~~iv~~l~~~~~~~ 277 (305)
+.+++++++||+.+.+.... +.... + +.+.....+++++|+|++++.+++++ +
T Consensus 159 ~~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~---~ 235 (311)
T 2p5y_A 159 QSYGLKWVSLRYGNVYGPRQDPHGEAGVVAIFAERVLKGLPVTLYARKTPGDEGCVRDYVYVGDVAEAHALALFSL---E 235 (311)
T ss_dssp HHHCCCEEEEEECEEECTTCCSSSTTHHHHHHHHHHHHTCCEEEECSSSTTSCCCEECEEEHHHHHHHHHHHHHHC---C
T ss_pred HHcCCCEEEEeeccccCcCCCCCCcCcHHHHHHHHHHcCCCcEEEecccCCCCCeEEeeEEHHHHHHHHHHHHhCC---C
Confidence 46999999999985532210 11111 2 23334467899999999999999864 7
Q ss_pred cEEEEecCC-cCHHHHHHHHHHhhhhc
Q 021928 278 LIFEVVNGE-EKVSDWKKCFSRLMEKT 303 (305)
Q Consensus 278 ~~~~v~~g~-~s~~d~~~~~~~l~~~~ 303 (305)
++|++++++ .++.|+++.+.++.+.+
T Consensus 236 ~~~~i~~~~~~s~~e~~~~i~~~~g~~ 262 (311)
T 2p5y_A 236 GIYNVGTGEGHTTREVLMAVAEAAGKA 262 (311)
T ss_dssp EEEEESCSCCEEHHHHHHHHHHHHTCC
T ss_pred CEEEeCCCCCccHHHHHHHHHHHhCCC
Confidence 899999876 58999999999998764
|
| >1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=2.7e-22 Score=184.64 Aligned_cols=202 Identities=15% Similarity=0.150 Sum_probs=147.4
Q ss_pred CEEEEEcCCChHHHHHHHHHHhC---C---CeEEEEEcCcch----hhhhc--CCCcEEeecCCCCHHHHHHHhcCccEE
Q 021928 99 DAVLVTDGDSDIGQMVILSLIVK---R---TRIKALVKDKRN----AMESF--GTYVESMAGDASNKKFLKTALRGVRSI 166 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~~~---g---~~V~~~~R~~~~----~~~~~--~~~v~~v~~D~~d~~~~~~~~~~~d~V 166 (305)
|+||||||+|+||++++++|+++ | ++|++++|+... ....+ ..+++++.+|+.|.+++.+++.++|+|
T Consensus 1 M~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~V 80 (337)
T 1r6d_A 1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLARELRGVDAI 80 (337)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHHHHTTTCCEE
T ss_pred CeEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhhhhcccCCCeEEEEcCCCCHHHHHHHhcCCCEE
Confidence 58999999999999999999997 8 999999996421 11111 246899999999999999999999999
Q ss_pred EECCcc----------------------hHhhhhhhcCCCEEEEEcccccccCCC--------CcccccchHHHHHHHHH
Q 021928 167 ICPSEG----------------------FISNAGSLKGVQHVILLSQLSVYRGSG--------GIQALMKGNARKLAEQD 216 (305)
Q Consensus 167 i~~~~g----------------------~~~~~a~~~gv~~~V~iSS~~~~~~~~--------~~~~~~~~~~~~~~~~a 216 (305)
||+++. .+.+++.+.++++||++||.++|.... +..+...| ...|..+
T Consensus 81 ih~A~~~~~~~~~~~~~~~~~~Nv~~~~~l~~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~Y--~~sK~~~ 158 (337)
T 1r6d_A 81 VHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVYGSIDSGSWTESSPLEPNSPY--AASKAGS 158 (337)
T ss_dssp EECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGCCCSSSCBCTTSCCCCCSHH--HHHHHHH
T ss_pred EECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEecchHHhCCCCCCCCCCCCCCCCCCch--HHHHHHH
Confidence 998431 134566778899999999998875321 11111222 2234445
Q ss_pred HHHHH----hCCCCEEEEecCCcccCCC--------------CCccee-eecCCCCCCccCHHHHHHHHHHHhhCCCCCC
Q 021928 217 ESMLM----ASGIPYTIIRTGVLQNTPG--------------GKQGFQ-FEEGCAANGSLSKEDAAFICVEALESIPQTG 277 (305)
Q Consensus 217 E~~l~----~~gi~~tilRPg~l~~~~~--------------~~~~~~-~~~~~~~~~~Is~~DvA~~iv~~l~~~~~~~ 277 (305)
|.+++ +.+++++++||+.+.+... .+.... ++.++....+++++|+|++++.+++++. .+
T Consensus 159 e~~~~~~~~~~g~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~-~g 237 (337)
T 1r6d_A 159 DLVARAYHRTYGLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALVLAGGR-AG 237 (337)
T ss_dssp HHHHHHHHHHHCCCEEEEEECEEECTTCCTTSHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHHCC-TT
T ss_pred HHHHHHHHHHHCCCEEEEEeeeeECCCCCCCChHHHHHHHHhcCCCcEEeCCCCeeEeeEeHHHHHHHHHHHHhCCC-CC
Confidence 55543 4699999999998653221 111122 2334445688999999999999997653 57
Q ss_pred cEEEEecCC-cCHHHHHHHHHHhhhhc
Q 021928 278 LIFEVVNGE-EKVSDWKKCFSRLMEKT 303 (305)
Q Consensus 278 ~~~~v~~g~-~s~~d~~~~~~~l~~~~ 303 (305)
++|+++++. .++.|+++.+.+..+.+
T Consensus 238 ~~~~v~~~~~~s~~e~~~~i~~~~g~~ 264 (337)
T 1r6d_A 238 EIYHIGGGLELTNRELTGILLDSLGAD 264 (337)
T ss_dssp CEEEECCCCEEEHHHHHHHHHHHHTCC
T ss_pred CEEEeCCCCCccHHHHHHHHHHHhCCC
Confidence 899999876 68999999999988764
|
| >2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} | Back alignment and structure |
|---|
Probab=99.90 E-value=1.7e-23 Score=190.28 Aligned_cols=200 Identities=13% Similarity=0.057 Sum_probs=147.4
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhC--CCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhc--CccEEEECCcc-
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVK--RTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--GVRSIICPSEG- 172 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~--~~d~Vi~~~~g- 172 (305)
+|+||||||+|+||++++++|+++ |++|++++|++.... ...+++++.+|+.|.+++.++++ ++|+|||+++.
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~--~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vih~a~~~ 79 (312)
T 2yy7_A 2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTD--VVNSGPFEVVNALDFNQIEHLVEVHKITDIYLMAALL 79 (312)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCH--HHHSSCEEECCTTCHHHHHHHHHHTTCCEEEECCCCC
T ss_pred CceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCcccc--ccCCCceEEecCCCHHHHHHHHhhcCCCEEEECCccC
Confidence 588999999999999999999999 899999999875532 12357899999999999999998 89999998431
Q ss_pred --------------------hHhhhhhhcCCCEEEEEcccccccCCCC---------cccccchHHHHHHHHHHHHHH--
Q 021928 173 --------------------FISNAGSLKGVQHVILLSQLSVYRGSGG---------IQALMKGNARKLAEQDESMLM-- 221 (305)
Q Consensus 173 --------------------~~~~~a~~~gv~~~V~iSS~~~~~~~~~---------~~~~~~~~~~~~~~~aE~~l~-- 221 (305)
.+.+++++.++++||++||.++|..... ..+...| ...|..+|.+++
T Consensus 80 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~~Y--~~sK~~~e~~~~~~ 157 (312)
T 2yy7_A 80 SATAEKNPAFAWDLNMNSLFHVLNLAKAKKIKKIFWPSSIAVFGPTTPKENTPQYTIMEPSTVY--GISKQAGERWCEYY 157 (312)
T ss_dssp HHHHHHCHHHHHHHHHHHHHHHHHHHHTTSCSEEECCEEGGGCCTTSCSSSBCSSCBCCCCSHH--HHHHHHHHHHHHHH
T ss_pred CCchhhChHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHHhCCCCCCCCccccCcCCCCchh--HHHHHHHHHHHHHH
Confidence 1345677788999999999998864221 1111122 223444555543
Q ss_pred --hCCCCEEEEecCCcccC---CCC----------------CcceeeecCCCCCCccCHHHHHHHHHHHhhCCCC---CC
Q 021928 222 --ASGIPYTIIRTGVLQNT---PGG----------------KQGFQFEEGCAANGSLSKEDAAFICVEALESIPQ---TG 277 (305)
Q Consensus 222 --~~gi~~tilRPg~l~~~---~~~----------------~~~~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~~---~~ 277 (305)
+.+++++++||+.+.+. +.. +....+..++....+++++|+|++++.+++++.. .+
T Consensus 158 ~~~~~~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~ 237 (312)
T 2yy7_A 158 HNIYGVDVRSIRYPGLISWSTPPGGGTTDYAVDIFYKAIADKKYECFLSSETKMPMMYMDDAIDATINIMKAPVEKIKIH 237 (312)
T ss_dssp HHHHCCEEECEEECEEECSSSCCCSCTTTHHHHHHHHHHHTSEEEESSCTTCCEEEEEHHHHHHHHHHHHHSCGGGCCCS
T ss_pred HHhcCCcEEEEeCCeEecCCCCCCCchhhhHHHHHHHHHcCCCeEEecCCCceeeeeeHHHHHHHHHHHHhCcccccccC
Confidence 35899999999986542 111 1111123345557889999999999999987654 24
Q ss_pred cEEEEecCCcCHHHHHHHHHHhhh
Q 021928 278 LIFEVVNGEEKVSDWKKCFSRLME 301 (305)
Q Consensus 278 ~~~~v~~g~~s~~d~~~~~~~l~~ 301 (305)
++||+++...++.|+.+.+.+..+
T Consensus 238 ~~~ni~~~~~s~~e~~~~i~~~~~ 261 (312)
T 2yy7_A 238 SSYNLAAMSFTPTEIANEIKKHIP 261 (312)
T ss_dssp SCEECCSEEECHHHHHHHHHTTCT
T ss_pred ceEEeCCCccCHHHHHHHHHHHCC
Confidence 899999755689999999988776
|
| >1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.90 E-value=1.5e-22 Score=186.06 Aligned_cols=207 Identities=11% Similarity=-0.025 Sum_probs=148.2
Q ss_pred cCcCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchh----hhhc--CCCcEEeecCCCCHHHHHHHhcC--cc
Q 021928 93 EFPEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA----MESF--GTYVESMAGDASNKKFLKTALRG--VR 164 (305)
Q Consensus 93 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~----~~~~--~~~v~~v~~D~~d~~~~~~~~~~--~d 164 (305)
.+..++|+||||||+|+||++++++|+++|++|++++|++... .+.. ..+++++.+|+.|.+++.+++++ +|
T Consensus 9 ~~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 88 (335)
T 1rpn_A 9 HHGSMTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKAQPQ 88 (335)
T ss_dssp ------CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHHCCS
T ss_pred cccccCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchhhccccCceEEEECCCCCHHHHHHHHHHcCCC
Confidence 3456789999999999999999999999999999999987541 1111 24688999999999999999986 59
Q ss_pred EEEECCcc----------------------hHhhhhhhcCC-CEEEEEcccccccCCCC--------cccccchHHHHHH
Q 021928 165 SIICPSEG----------------------FISNAGSLKGV-QHVILLSQLSVYRGSGG--------IQALMKGNARKLA 213 (305)
Q Consensus 165 ~Vi~~~~g----------------------~~~~~a~~~gv-~~~V~iSS~~~~~~~~~--------~~~~~~~~~~~~~ 213 (305)
+|||+++. .+.+++.+.++ ++||++||.++|..... ..+...| ...|
T Consensus 89 ~Vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~v~g~~~~~~~~E~~~~~p~~~Y--~~sK 166 (335)
T 1rpn_A 89 EVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQAERQDENTPFYPRSPY--GVAK 166 (335)
T ss_dssp EEEECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHH--HHHH
T ss_pred EEEECccccchhhhhhChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCHHHhCCCCCCCCCcccCCCCCChh--HHHH
Confidence 99998431 13455667786 89999999988864322 1111122 2234
Q ss_pred HHHHHHHHh----CCCCEEEEecCCcccCC-C----------------CCc-c-eeeecCCCCCCccCHHHHHHHHHHHh
Q 021928 214 EQDESMLMA----SGIPYTIIRTGVLQNTP-G----------------GKQ-G-FQFEEGCAANGSLSKEDAAFICVEAL 270 (305)
Q Consensus 214 ~~aE~~l~~----~gi~~tilRPg~l~~~~-~----------------~~~-~-~~~~~~~~~~~~Is~~DvA~~iv~~l 270 (305)
..+|.+++. .+++++++||+.+.+.. . .+. . ..++.++....+++++|+|++++.++
T Consensus 167 ~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~ 246 (335)
T 1rpn_A 167 LYGHWITVNYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWLML 246 (335)
T ss_dssp HHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCcEEEEeeCcccCCCCCCCcchHHHHHHHHHHHcCCCceEEeCCCcceeceEEHHHHHHHHHHHH
Confidence 455665543 59999999998854321 1 011 1 22344455678999999999999999
Q ss_pred hCCCCCCcEEEEecCC-cCHHHHHHHHHHhhhhc
Q 021928 271 ESIPQTGLIFEVVNGE-EKVSDWKKCFSRLMEKT 303 (305)
Q Consensus 271 ~~~~~~~~~~~v~~g~-~s~~d~~~~~~~l~~~~ 303 (305)
+++. +++|++++++ .++.|+++.+.++.+.+
T Consensus 247 ~~~~--~~~~ni~~~~~~s~~e~~~~i~~~~g~~ 278 (335)
T 1rpn_A 247 QQDK--ADDYVVATGVTTTVRDMCQIAFEHVGLD 278 (335)
T ss_dssp HSSS--CCCEEECCSCEEEHHHHHHHHHHTTTCC
T ss_pred hcCC--CCEEEEeCCCCccHHHHHHHHHHHhCCC
Confidence 8764 4799999876 68999999999988763
|
| >3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=99.90 E-value=3.1e-22 Score=186.36 Aligned_cols=201 Identities=13% Similarity=0.093 Sum_probs=150.5
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHh--CCCeEEEEEcCcc-------------hhhhhcCCCcEEeecCCCCHHHHHHH-
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIV--KRTRIKALVKDKR-------------NAMESFGTYVESMAGDASNKKFLKTA- 159 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~--~g~~V~~~~R~~~-------------~~~~~~~~~v~~v~~D~~d~~~~~~~- 159 (305)
..+|+||||||+||||++++++|++ .|++|++++|+.. ......+.+++++.+|++|.+++.++
T Consensus 8 ~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~ 87 (362)
T 3sxp_A 8 LENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDLRRLE 87 (362)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHHHHHT
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHHHHhh
Confidence 4568999999999999999999999 9999999999764 12222345689999999999999999
Q ss_pred hcCccEEEECCcc--------------------hHhhhhhhcCCCEEEEEcccccccCCCCc-------ccccchHHHHH
Q 021928 160 LRGVRSIICPSEG--------------------FISNAGSLKGVQHVILLSQLSVYRGSGGI-------QALMKGNARKL 212 (305)
Q Consensus 160 ~~~~d~Vi~~~~g--------------------~~~~~a~~~gv~~~V~iSS~~~~~~~~~~-------~~~~~~~~~~~ 212 (305)
..++|+|||+++. .+.+++++.+++ ||++||.++|.....+ .+... +...
T Consensus 88 ~~~~D~vih~A~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~-~V~~SS~~vyg~~~~~~~E~~~~~p~~~--Y~~s 164 (362)
T 3sxp_A 88 KLHFDYLFHQAAVSDTTMLNQELVMKTNYQAFLNLLEIARSKKAK-VIYASSAGVYGNTKAPNVVGKNESPENV--YGFS 164 (362)
T ss_dssp TSCCSEEEECCCCCGGGCCCHHHHHHHHTHHHHHHHHHHHHTTCE-EEEEEEGGGGCSCCSSBCTTSCCCCSSH--HHHH
T ss_pred ccCCCEEEECCccCCccccCHHHHHHHHHHHHHHHHHHHHHcCCc-EEEeCcHHHhCCCCCCCCCCCCCCCCCh--hHHH
Confidence 8899999998431 145567778887 9999999888653321 11111 2234
Q ss_pred HHHHHHHHHhCC--CCEEEEecCCcccCCC------------------CCcceee-ecCCCCCCccCHHHHHHHHHHHhh
Q 021928 213 AEQDESMLMASG--IPYTIIRTGVLQNTPG------------------GKQGFQF-EEGCAANGSLSKEDAAFICVEALE 271 (305)
Q Consensus 213 ~~~aE~~l~~~g--i~~tilRPg~l~~~~~------------------~~~~~~~-~~~~~~~~~Is~~DvA~~iv~~l~ 271 (305)
|..+|.+++... +++++|||+.+.+... .+....+ +.+.....+++++|+|++++.+++
T Consensus 165 K~~~E~~~~~~~~~~~~~~lR~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~ai~~~~~ 244 (362)
T 3sxp_A 165 KLCMDEFVLSHSNDNVQVGLRYFNVYGPREFYKEKTASMVLQLALGAMAFKEVKLFEFGEQLRDFVYIEDVIQANVKAMK 244 (362)
T ss_dssp HHHHHHHHHHTTTTSCEEEEEECSEESTTCGGGGGGSCHHHHHHHHHHTTSEEECSGGGCCEEECEEHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhccCCEEEEEeCceeCcCCCCCCcchhHHHHHHHHHHhCCCeEEECCCCeEEccEEHHHHHHHHHHHHh
Confidence 556788877644 8999999988653221 1111111 334455789999999999999998
Q ss_pred CCCCCCcEEEEecCC-cCHHHHHHHHHHhhh
Q 021928 272 SIPQTGLIFEVVNGE-EKVSDWKKCFSRLME 301 (305)
Q Consensus 272 ~~~~~~~~~~v~~g~-~s~~d~~~~~~~l~~ 301 (305)
.+. .+ +|++++++ .++.|+++.+.+..+
T Consensus 245 ~~~-~g-~~~i~~~~~~s~~e~~~~i~~~~g 273 (362)
T 3sxp_A 245 AQK-SG-VYNVGYSQARSYNEIVSILKEHLG 273 (362)
T ss_dssp CSS-CE-EEEESCSCEEEHHHHHHHHHHHHC
T ss_pred cCC-CC-EEEeCCCCCccHHHHHHHHHHHcC
Confidence 764 45 99999876 589999999999887
|
| >1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=1.5e-22 Score=190.56 Aligned_cols=202 Identities=19% Similarity=0.197 Sum_probs=144.6
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhh-----------------------hhcCCCcEEeecCCCC
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM-----------------------ESFGTYVESMAGDASN 152 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~-----------------------~~~~~~v~~v~~D~~d 152 (305)
..+++||||||+||||++++++|+++|++|++++|...... .....+++++.+|+.|
T Consensus 9 ~~~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~Dl~d 88 (404)
T 1i24_A 9 HHGSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICD 88 (404)
T ss_dssp ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTS
T ss_pred cCCCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhccCCceEEEECCCCC
Confidence 45799999999999999999999999999999988643210 0124578999999999
Q ss_pred HHHHHHHhcC--ccEEEECCcc---------------h----------HhhhhhhcCC-CEEEEEcccccccCCC-----
Q 021928 153 KKFLKTALRG--VRSIICPSEG---------------F----------ISNAGSLKGV-QHVILLSQLSVYRGSG----- 199 (305)
Q Consensus 153 ~~~~~~~~~~--~d~Vi~~~~g---------------~----------~~~~a~~~gv-~~~V~iSS~~~~~~~~----- 199 (305)
.+++.+++++ +|+|||+++. . +.+++.+.++ ++||++||.++|....
T Consensus 89 ~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~~~V~~SS~~vyg~~~~~~~E 168 (404)
T 1i24_A 89 FEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPNIDIEE 168 (404)
T ss_dssp HHHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGGCCCSSCBCS
T ss_pred HHHHHHHHhccCCCEEEECCCCCCccchhhCccchhhhHHHHHHHHHHHHHHHHHhCCCcEEEEeCcHHHhCCCCCCCCc
Confidence 9999999988 9999998431 0 2344666777 5999999998886321
Q ss_pred ----------------CcccccchHHHHHHHHHHHHHH----hCCCCEEEEecCCcccCCCC------------------
Q 021928 200 ----------------GIQALMKGNARKLAEQDESMLM----ASGIPYTIIRTGVLQNTPGG------------------ 241 (305)
Q Consensus 200 ----------------~~~~~~~~~~~~~~~~aE~~l~----~~gi~~tilRPg~l~~~~~~------------------ 241 (305)
...+...|. ..|..+|.+++ +.++++++|||+.+.+....
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~Y~--~sK~~~e~~~~~~~~~~gi~~~ivrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~ 246 (404)
T 1i24_A 169 GYITITHNGRTDTLPYPKQASSFYH--LSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVF 246 (404)
T ss_dssp SEEEEEETTEEEEEECCCCCCSHHH--HHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCCSTTT
T ss_pred cccccccccccccccCCCCCCChhH--HHHHHHHHHHHHHHHhcCCeEEEEecceeeCCCCCccccccccccccccccch
Confidence 111111222 22334555543 34999999999996532210
Q ss_pred -------------Ccce-eeecCCCCCCccCHHHHHHHHHHHhhCCCCCC--cEEEEecCCcCHHHHHHHHHHh
Q 021928 242 -------------KQGF-QFEEGCAANGSLSKEDAAFICVEALESIPQTG--LIFEVVNGEEKVSDWKKCFSRL 299 (305)
Q Consensus 242 -------------~~~~-~~~~~~~~~~~Is~~DvA~~iv~~l~~~~~~~--~~~~v~~g~~s~~d~~~~~~~l 299 (305)
+..+ .++.+.....+|+++|+|++++.+++++...+ ++||+++...++.|+++.+.++
T Consensus 247 ~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~a~~~~l~~~~~~g~~~~yni~~~~~s~~e~~~~i~~~ 320 (404)
T 1i24_A 247 GTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFTEQFSVNELASLVTKA 320 (404)
T ss_dssp CCHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCCCTTCEEEEEECSEEEEHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHcCCeeEEeCCCCceECcEEHHHHHHHHHHHHhCcccCCCceEEEECCCCCcHHHHHHHHHHH
Confidence 1112 22344455789999999999999998776556 7999998556899999999987
|
| >1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=3.2e-22 Score=184.77 Aligned_cols=205 Identities=17% Similarity=0.143 Sum_probs=146.3
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcch----------hhh---hcCCCcEEeecCCCCHHHHHHHhc--
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN----------AME---SFGTYVESMAGDASNKKFLKTALR-- 161 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~----------~~~---~~~~~v~~v~~D~~d~~~~~~~~~-- 161 (305)
|+|+||||||+|+||++++++|+++|++|++++|+... ... ..+.+++++.+|+.|.+++.++++
T Consensus 1 M~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 80 (348)
T 1ek6_A 1 MAEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKY 80 (348)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCHHHHHHHHHhc
Confidence 35899999999999999999999999999999886432 111 124578999999999999999998
Q ss_pred CccEEEECCcc----------------------hHhhhhhhcCCCEEEEEcccccccCCC--------Cccc-ccchHHH
Q 021928 162 GVRSIICPSEG----------------------FISNAGSLKGVQHVILLSQLSVYRGSG--------GIQA-LMKGNAR 210 (305)
Q Consensus 162 ~~d~Vi~~~~g----------------------~~~~~a~~~gv~~~V~iSS~~~~~~~~--------~~~~-~~~~~~~ 210 (305)
++|+|||+++. .+.+++++.++++||++||..+|.... ...+ ...| .
T Consensus 81 ~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~E~~~~~p~~~~Y--~ 158 (348)
T 1ek6_A 81 SFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPY--G 158 (348)
T ss_dssp CEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSSHH--H
T ss_pred CCCEEEECCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHhCCCEEEEECcHHHhCCCCCCCcCCCCCCCCCCCch--H
Confidence 89999998431 134456778899999999998885321 1111 1122 2
Q ss_pred HHHHHHHHHHHh---CC--CCEEEEecCCcccCCC-------------------------CCcceee-e------cCCCC
Q 021928 211 KLAEQDESMLMA---SG--IPYTIIRTGVLQNTPG-------------------------GKQGFQF-E------EGCAA 253 (305)
Q Consensus 211 ~~~~~aE~~l~~---~g--i~~tilRPg~l~~~~~-------------------------~~~~~~~-~------~~~~~ 253 (305)
..|..+|.+++. .+ ++++++||+.+.+... .+..+.+ + .++..
T Consensus 159 ~sK~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~ 238 (348)
T 1ek6_A 159 KSKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGV 238 (348)
T ss_dssp HHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCE
T ss_pred HHHHHHHHHHHHHHhcCCCcceEEEeeccccCCCcccccCcCcccchhhHHHHHHHHHHhcCCCeEEeCCcccCCCCceE
Confidence 234455665543 24 9999999988543210 0111111 1 22344
Q ss_pred CCccCHHHHHHHHHHHhhCCC-CCC-cEEEEecCC-cCHHHHHHHHHHhhhhc
Q 021928 254 NGSLSKEDAAFICVEALESIP-QTG-LIFEVVNGE-EKVSDWKKCFSRLMEKT 303 (305)
Q Consensus 254 ~~~Is~~DvA~~iv~~l~~~~-~~~-~~~~v~~g~-~s~~d~~~~~~~l~~~~ 303 (305)
..+|+++|+|++++.+++++. ..+ ++||+++++ .++.|+++.+.++.+.+
T Consensus 239 ~~~i~v~Dva~a~~~~~~~~~~~~g~~~~ni~~~~~~s~~e~~~~i~~~~g~~ 291 (348)
T 1ek6_A 239 RDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKK 291 (348)
T ss_dssp ECEEEHHHHHHHHHHHHHHHTTTCCEEEEEECCSCCEEHHHHHHHHHHHHCSC
T ss_pred EeeEEHHHHHHHHHHHHhcccccCCceEEEeCCCCCccHHHHHHHHHHHhCCC
Confidence 678999999999999998653 344 899999865 68999999999988764
|
| >4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.89 E-value=8.8e-23 Score=184.93 Aligned_cols=196 Identities=10% Similarity=0.054 Sum_probs=142.4
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcC--ccEEEECCcc-
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRG--VRSIICPSEG- 172 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~--~d~Vi~~~~g- 172 (305)
.++|+||||||+|+||++++++|+++|+ +... ....++++.+|+.|.+++.+++++ +|+|||+++.
T Consensus 4 ~~~~~vlVtGatG~iG~~l~~~L~~~g~------~~~~-----~~~~~~~~~~D~~d~~~~~~~~~~~~~d~Vih~A~~~ 72 (319)
T 4b8w_A 4 FQSMRILVTGGSGLVGKAIQKVVADGAG------LPGE-----DWVFVSSKDADLTDTAQTRALFEKVQPTHVIHLAAMV 72 (319)
T ss_dssp CCCCEEEEETCSSHHHHHHHHHHHTTTC------CTTC-----EEEECCTTTCCTTSHHHHHHHHHHSCCSEEEECCCCC
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHhcCC------cccc-----cccccCceecccCCHHHHHHHHhhcCCCEEEECceec
Confidence 4579999999999999999999999998 2111 112356678999999999999987 8999998321
Q ss_pred ----------------------hHhhhhhhcCCCEEEEEcccccccCCCC------------cccccchHHHHHHHHHHH
Q 021928 173 ----------------------FISNAGSLKGVQHVILLSQLSVYRGSGG------------IQALMKGNARKLAEQDES 218 (305)
Q Consensus 173 ----------------------~~~~~a~~~gv~~~V~iSS~~~~~~~~~------------~~~~~~~~~~~~~~~aE~ 218 (305)
.+.+++++.++++|||+||..+|..... ..+. .+.+...|..+|.
T Consensus 73 ~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~p~-~~~Y~~sK~~~E~ 151 (319)
T 4b8w_A 73 GGLFRNIKYNLDFWRKNVHMNDNVLHSAFEVGARKVVSCLSTCIFPDKTTYPIDETMIHNGPPHNS-NFGYSYAKRMIDV 151 (319)
T ss_dssp CCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGGGSCSSCCSSBCGGGGGBSCCCSS-SHHHHHHHHHHHH
T ss_pred ccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEEcchhhcCCCCCCCccccccccCCCCCC-cchHHHHHHHHHH
Confidence 1456678889999999999998864221 1110 0112223445666
Q ss_pred HHH----hCCCCEEEEecCCcccCCCC----------------------Cccee-eecCCCCCCccCHHHHHHHHHHHhh
Q 021928 219 MLM----ASGIPYTIIRTGVLQNTPGG----------------------KQGFQ-FEEGCAANGSLSKEDAAFICVEALE 271 (305)
Q Consensus 219 ~l~----~~gi~~tilRPg~l~~~~~~----------------------~~~~~-~~~~~~~~~~Is~~DvA~~iv~~l~ 271 (305)
+++ +.+++++++||+.+.+.... +..+. ++.++....+|+++|+|++++.+++
T Consensus 152 ~~~~~~~~~~~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~ 231 (319)
T 4b8w_A 152 QNRAYFQQYGCTFTAVIPTNVFGPHDNFNIEDGHVLPGLIHKVHLAKSSGSALTVWGTGNPRRQFIYSLDLAQLFIWVLR 231 (319)
T ss_dssp HHHHHHHHHCCEEEEEEECEEECTTCCCCTTTSCHHHHHHHHHHHHHHHTCCEEEESCSCCEECEEEHHHHHHHHHHHHH
T ss_pred HHHHHHHhhCCCEEEEeeccccCCCCCCCCccccccHHHHHHHHHHhccCCceEEeCCCCeeEEEEeHHHHHHHHHHHHh
Confidence 554 47999999999996543211 11122 2344555788999999999999998
Q ss_pred CCC-CCCcEEEEecCC-cCHHHHHHHHHHhhhhc
Q 021928 272 SIP-QTGLIFEVVNGE-EKVSDWKKCFSRLMEKT 303 (305)
Q Consensus 272 ~~~-~~~~~~~v~~g~-~s~~d~~~~~~~l~~~~ 303 (305)
++. ..+++||+++++ .++.|+++.+.+..+.+
T Consensus 232 ~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~ 265 (319)
T 4b8w_A 232 EYNEVEPIILSVGEEDEVSIKEAAEAVVEAMDFH 265 (319)
T ss_dssp HCCCSSCEEECCCGGGCEEHHHHHHHHHHHTTCC
T ss_pred ccccCCceEEEecCCCceeHHHHHHHHHHHhCCC
Confidence 754 457899999865 69999999999998865
|
| >2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A | Back alignment and structure |
|---|
Probab=99.89 E-value=8.3e-23 Score=186.32 Aligned_cols=194 Identities=12% Similarity=0.107 Sum_probs=132.3
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcC--ccEEEECCcc---
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRG--VRSIICPSEG--- 172 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~--~d~Vi~~~~g--- 172 (305)
+|+||||||+|+||++++++|+++|++|++++|+... .+ ++.+|+.|.+++.+++++ +|+|||+++.
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~------~~--~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~~~~ 73 (315)
T 2ydy_A 2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRAR------PK--FEQVNLLDSNAVHHIIHDFQPHVIVHCAAERRP 73 (315)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC--------------------------CHHHHHHHCCSEEEECC-----
T ss_pred CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCC------CC--eEEecCCCHHHHHHHHHhhCCCEEEECCcccCh
Confidence 5899999999999999999999999999999987643 12 788999999999999885 8999998431
Q ss_pred -------------------hHhhhhhhcCCCEEEEEcccccccCCCC-------cccccchHHHHHHHHHHHHHHhCCCC
Q 021928 173 -------------------FISNAGSLKGVQHVILLSQLSVYRGSGG-------IQALMKGNARKLAEQDESMLMASGIP 226 (305)
Q Consensus 173 -------------------~~~~~a~~~gv~~~V~iSS~~~~~~~~~-------~~~~~~~~~~~~~~~aE~~l~~~gi~ 226 (305)
.+.+++.+.++ +||++||..+|.+... ..+... +...|..+|.+++..+++
T Consensus 74 ~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v~~~~~~~~~E~~~~~~~~~--Y~~sK~~~e~~~~~~~~~ 150 (315)
T 2ydy_A 74 DVVENQPDAASQLNVDASGNLAKEAAAVGA-FLIYISSDYVFDGTNPPYREEDIPAPLNL--YGKTKLDGEKAVLENNLG 150 (315)
T ss_dssp --------------CHHHHHHHHHHHHHTC-EEEEEEEGGGSCSSSCSBCTTSCCCCCSH--HHHHHHHHHHHHHHHCTT
T ss_pred hhhhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEchHHHcCCCCCCCCCCCCCCCcCH--HHHHHHHHHHHHHHhCCC
Confidence 14455666776 9999999998865111 111111 223456788888888899
Q ss_pred EEEEecCCcccCCCC----------------CcceeeecCCCCCCccCHHHHHHHHHHHhhCC---CCCCcEEEEecCC-
Q 021928 227 YTIIRTGVLQNTPGG----------------KQGFQFEEGCAANGSLSKEDAAFICVEALESI---PQTGLIFEVVNGE- 286 (305)
Q Consensus 227 ~tilRPg~l~~~~~~----------------~~~~~~~~~~~~~~~Is~~DvA~~iv~~l~~~---~~~~~~~~v~~g~- 286 (305)
+++|||+.+.+.... +..... .++....+++++|+|++++.++.++ ...+++|++++++
T Consensus 151 ~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~i~~~~~ 229 (315)
T 2ydy_A 151 AAVLRIPILYGEVEKLEESAVTVMFDKVQFSNKSANM-DHWQQRFPTHVKDVATVCRQLAEKRMLDPSIKGTFHWSGNEQ 229 (315)
T ss_dssp CEEEEECSEECSCSSGGGSTTGGGHHHHHCCSSCEEE-ECSSBBCCEEHHHHHHHHHHHHHHHHTCTTCCEEEECCCSCC
T ss_pred eEEEeeeeeeCCCCcccccHHHHHHHHHHhcCCCeee-ccCceECcEEHHHHHHHHHHHHHhhccccCCCCeEEEcCCCc
Confidence 999999996632111 111111 2345568899999999999998754 3567899999875
Q ss_pred cCHHHHHHHHHHhhhhc
Q 021928 287 EKVSDWKKCFSRLMEKT 303 (305)
Q Consensus 287 ~s~~d~~~~~~~l~~~~ 303 (305)
.++.|+++.+.++.+.+
T Consensus 230 ~s~~e~~~~i~~~~g~~ 246 (315)
T 2ydy_A 230 MTKYEMACAIADAFNLP 246 (315)
T ss_dssp BCHHHHHHHHHHHTTCC
T ss_pred ccHHHHHHHHHHHhCCC
Confidence 69999999999988765
|
| >4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.89 E-value=1.3e-22 Score=184.01 Aligned_cols=192 Identities=14% Similarity=0.112 Sum_probs=134.0
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEECCcc------
Q 021928 99 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG------ 172 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~g------ 172 (305)
|+|||||||||||++|+++|+++||+|++++|++.... + .. .+.....++++|+|||+++.
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~~~------~---~~----~~~~~~~l~~~d~vihla~~~i~~~~ 67 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGPGR------I---TW----DELAASGLPSCDAAVNLAGENILNPL 67 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTE------E---EH----HHHHHHCCCSCSEEEECCCCCSSCTT
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCcCe------e---ec----chhhHhhccCCCEEEEeccCcccchh
Confidence 78999999999999999999999999999999874321 1 11 23345678999999987321
Q ss_pred --------------------hHhhhhhhcC--CCEEEEEcccccccCCCCc--------ccccchHHHHHHHHHHHHHHh
Q 021928 173 --------------------FISNAGSLKG--VQHVILLSQLSVYRGSGGI--------QALMKGNARKLAEQDESMLMA 222 (305)
Q Consensus 173 --------------------~~~~~a~~~g--v~~~V~iSS~~~~~~~~~~--------~~~~~~~~~~~~~~aE~~l~~ 222 (305)
.+.++++..+ .++||++||.++|.+.... .+...+.......+.+....+
T Consensus 68 ~~~~~~~~~~~~~~~v~~t~~l~~~~~~~~~~~~~~i~~Ss~~vyg~~~~~~~~E~~p~~~~~~~~~~~~~~e~~~~~~~ 147 (298)
T 4b4o_A 68 RRWNETFQKEVLGSRLETTQLLAKAITKAPQPPKAWVLVTGVAYYQPSLTAEYDEDSPGGDFDFFSNLVTKWEAAARLPG 147 (298)
T ss_dssp SCCCHHHHHHHHHHHHHHHHHHHHHHHHCSSCCSEEEEEEEGGGSCCCSSCCBCTTCCCSCSSHHHHHHHHHHHHHCCSS
T ss_pred hhhhhhhhhhhhhHHHHHHHHHHHHHHHhCCCceEEEEEeeeeeecCCCCCcccccCCccccchhHHHHHHHHHHHHhhc
Confidence 0233344444 4568889999988643221 111111111112222333345
Q ss_pred CCCCEEEEecCCcccCCC-----------CCcceeeecCCCCCCccCHHHHHHHHHHHhhCCCCCCcEEEEecCC-cCHH
Q 021928 223 SGIPYTIIRTGVLQNTPG-----------GKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVVNGE-EKVS 290 (305)
Q Consensus 223 ~gi~~tilRPg~l~~~~~-----------~~~~~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~~~~~~~~v~~g~-~s~~ 290 (305)
.+++++++||+.+.+..+ .+....++.++...++||++|+|++++.+++++... .+||+++++ .+..
T Consensus 148 ~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~ihv~Dva~a~~~~~~~~~~~-g~yn~~~~~~~t~~ 226 (298)
T 4b4o_A 148 DSTRQVVVRSGVVLGRGGGAMGHMLLPFRLGLGGPIGSGHQFFPWIHIGDLAGILTHALEANHVH-GVLNGVAPSSATNA 226 (298)
T ss_dssp SSSEEEEEEECEEECTTSHHHHHHHHHHHTTCCCCBTTSCSBCCEEEHHHHHHHHHHHHHCTTCC-EEEEESCSCCCBHH
T ss_pred cCCceeeeeeeeEEcCCCCchhHHHHHHhcCCcceecccCceeecCcHHHHHHHHHHHHhCCCCC-CeEEEECCCccCHH
Confidence 789999999998654332 223334456677789999999999999999987654 499999876 5999
Q ss_pred HHHHHHHHhhhhcC
Q 021928 291 DWKKCFSRLMEKTG 304 (305)
Q Consensus 291 d~~~~~~~l~~~~~ 304 (305)
|+.+.+++.++++.
T Consensus 227 e~~~~ia~~lgrp~ 240 (298)
T 4b4o_A 227 EFAQTFGAALGRRA 240 (298)
T ss_dssp HHHHHHHHHHTCCC
T ss_pred HHHHHHHHHhCcCC
Confidence 99999999998763
|
| >3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.89 E-value=2.6e-22 Score=180.65 Aligned_cols=184 Identities=15% Similarity=0.120 Sum_probs=143.8
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhc--CccEEEECCcc----
Q 021928 99 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--GVRSIICPSEG---- 172 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~--~~d~Vi~~~~g---- 172 (305)
|+||||||+|+||++++++|+++|++|++++|. .+|+.|.+++.++++ ++|+|||+++.
T Consensus 6 m~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~---------------~~D~~d~~~~~~~~~~~~~d~vi~~a~~~~~~ 70 (287)
T 3sc6_A 6 ERVIITGANGQLGKQLQEELNPEEYDIYPFDKK---------------LLDITNISQVQQVVQEIRPHIIIHCAAYTKVD 70 (287)
T ss_dssp EEEEEESTTSHHHHHHHHHSCTTTEEEEEECTT---------------TSCTTCHHHHHHHHHHHCCSEEEECCCCCCHH
T ss_pred eEEEEECCCCHHHHHHHHHHHhCCCEEEEeccc---------------ccCCCCHHHHHHHHHhcCCCEEEECCcccChH
Confidence 499999999999999999999999999999992 389999999999998 69999998431
Q ss_pred ------------------hHhhhhhhcCCCEEEEEcccccccCCCC--------cccccchHHHHHHHHHHHHHHhCCCC
Q 021928 173 ------------------FISNAGSLKGVQHVILLSQLSVYRGSGG--------IQALMKGNARKLAEQDESMLMASGIP 226 (305)
Q Consensus 173 ------------------~~~~~a~~~gv~~~V~iSS~~~~~~~~~--------~~~~~~~~~~~~~~~aE~~l~~~gi~ 226 (305)
.+.+++++.++ +||++||..+|..... ..+... +...|..+|.+++....+
T Consensus 71 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~--Y~~sK~~~E~~~~~~~~~ 147 (287)
T 3sc6_A 71 QAEKERDLAYVINAIGARNVAVASQLVGA-KLVYISTDYVFQGDRPEGYDEFHNPAPINI--YGASKYAGEQFVKELHNK 147 (287)
T ss_dssp HHTTCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGSCCCCSSCBCTTSCCCCCSH--HHHHHHHHHHHHHHHCSS
T ss_pred HHhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEchhhhcCCCCCCCCCCCCCCCCCCH--HHHHHHHHHHHHHHhCCC
Confidence 14556777888 7999999998864321 111122 233466789999988889
Q ss_pred EEEEecCCcccCCC------------CCcceeeecCCCCCCccCHHHHHHHHHHHhhCCCCCCcEEEEecCC-cCHHHHH
Q 021928 227 YTIIRTGVLQNTPG------------GKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVVNGE-EKVSDWK 293 (305)
Q Consensus 227 ~tilRPg~l~~~~~------------~~~~~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~~~~~~~~v~~g~-~s~~d~~ 293 (305)
++++||+.+.+... .+..... .++....+++++|+|++++.+++++. +++|++++++ .++.|+.
T Consensus 148 ~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~v~Dva~~~~~~~~~~~--~~~~~i~~~~~~s~~e~~ 224 (287)
T 3sc6_A 148 YFIVRTSWLYGKYGNNFVKTMIRLGKEREEISV-VADQIGSPTYVADLNVMINKLIHTSL--YGTYHVSNTGSCSWFEFA 224 (287)
T ss_dssp EEEEEECSEECSSSCCHHHHHHHHHTTCSEEEE-ECSCEECCEEHHHHHHHHHHHHTSCC--CEEEECCCBSCEEHHHHH
T ss_pred cEEEeeeeecCCCCCcHHHHHHHHHHcCCCeEe-ecCcccCceEHHHHHHHHHHHHhCCC--CCeEEEcCCCcccHHHHH
Confidence 99999999654321 1222222 34566789999999999999998876 7799999876 6999999
Q ss_pred HHHHHhhhhc
Q 021928 294 KCFSRLMEKT 303 (305)
Q Consensus 294 ~~~~~l~~~~ 303 (305)
+.+.+..+.+
T Consensus 225 ~~i~~~~g~~ 234 (287)
T 3sc6_A 225 KKIFSYANMK 234 (287)
T ss_dssp HHHHHHHTCC
T ss_pred HHHHHHcCCC
Confidence 9999998864
|
| >2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.89 E-value=7e-22 Score=181.60 Aligned_cols=203 Identities=16% Similarity=0.116 Sum_probs=144.8
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCC--CeEEEEEcCcc--hhh--hhc--CCCcEEeecCCCCHHHHHHHhcCccEEEEC
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKR--NAM--ESF--GTYVESMAGDASNKKFLKTALRGVRSIICP 169 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g--~~V~~~~R~~~--~~~--~~~--~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~ 169 (305)
+|+||||||+||||++++++|+++| ++|++++|... ... +.+ ..+++++.+|+.|.+++.+++.++|+|||+
T Consensus 3 ~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~ 82 (336)
T 2hun_A 3 SMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANLKDLEDDPRYTFVKGDVADYELVKELVRKVDGVVHL 82 (336)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHTCSEEEEC
T ss_pred CCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHHhhhccCCceEEEEcCCCCHHHHHHHhhCCCEEEEC
Confidence 4789999999999999999999986 89999998642 111 111 246899999999999999999999999998
Q ss_pred Ccc----------------------hHhhhhhhcCC-CEEEEEcccccccCCC--------CcccccchHHHHHHHHHHH
Q 021928 170 SEG----------------------FISNAGSLKGV-QHVILLSQLSVYRGSG--------GIQALMKGNARKLAEQDES 218 (305)
Q Consensus 170 ~~g----------------------~~~~~a~~~gv-~~~V~iSS~~~~~~~~--------~~~~~~~~~~~~~~~~aE~ 218 (305)
++. .+.+++...++ ++||++||..+|.... +..+...| ...|..+|.
T Consensus 83 A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~E~~~~~~~~~Y--~~sK~~~e~ 160 (336)
T 2hun_A 83 AAESHVDRSISSPEIFLHSNVIGTYTLLESIRRENPEVRFVHVSTDEVYGDILKGSFTENDRLMPSSPY--SATKAASDM 160 (336)
T ss_dssp CCCCCHHHHHHCTHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEEGGGGCCCSSSCBCTTBCCCCCSHH--HHHHHHHHH
T ss_pred CCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEeccHHHHCCCCCCCcCCCCCCCCCCcc--HHHHHHHHH
Confidence 431 03344555564 7999999998875321 11111222 223444555
Q ss_pred HHH----hCCCCEEEEecCCcccCCCC--------------Cccee-eecCCCCCCccCHHHHHHHHHHHhhCCCCCCcE
Q 021928 219 MLM----ASGIPYTIIRTGVLQNTPGG--------------KQGFQ-FEEGCAANGSLSKEDAAFICVEALESIPQTGLI 279 (305)
Q Consensus 219 ~l~----~~gi~~tilRPg~l~~~~~~--------------~~~~~-~~~~~~~~~~Is~~DvA~~iv~~l~~~~~~~~~ 279 (305)
+++ +.+++++++||+.+.+.... +.... ++.+.....+++++|+|++++.+++++ ..+++
T Consensus 161 ~~~~~~~~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~-~~g~~ 239 (336)
T 2hun_A 161 LVLGWTRTYNLNASITRCTNNYGPYQFPEKLIPKTIIRASLGLKIPIYGTGKNVRDWLYVEDHVRAIELVLLKG-ESREI 239 (336)
T ss_dssp HHHHHHHHTTCEEEEEEECEEESTTCCTTSHHHHHHHHHHTTCCEEEETC---CEEEEEHHHHHHHHHHHHHHC-CTTCE
T ss_pred HHHHHHHHhCCCEEEEeeeeeeCcCCCcCchHHHHHHHHHcCCCceEeCCCCceeeeEEHHHHHHHHHHHHhCC-CCCCE
Confidence 554 46899999999996543211 11122 233344568899999999999999764 35789
Q ss_pred EEEecCC-cCHHHHHHHHHHhhhhc
Q 021928 280 FEVVNGE-EKVSDWKKCFSRLMEKT 303 (305)
Q Consensus 280 ~~v~~g~-~s~~d~~~~~~~l~~~~ 303 (305)
|+++++. .++.|+++.+.++.+.+
T Consensus 240 ~~v~~~~~~s~~e~~~~i~~~~g~~ 264 (336)
T 2hun_A 240 YNISAGEEKTNLEVVKIILRLMGKG 264 (336)
T ss_dssp EEECCSCEECHHHHHHHHHHHTTCC
T ss_pred EEeCCCCcccHHHHHHHHHHHhCCC
Confidence 9999876 69999999999988764
|
| >2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=2.6e-22 Score=186.52 Aligned_cols=194 Identities=18% Similarity=0.237 Sum_probs=147.6
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhC-CC-eEEEEEcCcchhhh---hc-CCCcEEeecCCCCHHHHHHHhcCccEEEECC
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVK-RT-RIKALVKDKRNAME---SF-GTYVESMAGDASNKKFLKTALRGVRSIICPS 170 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~-g~-~V~~~~R~~~~~~~---~~-~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~ 170 (305)
.+|+||||||+|+||++++++|+++ |+ +|++++|++.+... .+ ..+++++.+|++|.+++.++++++|+|||++
T Consensus 20 ~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~D~Vih~A 99 (344)
T 2gn4_A 20 DNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVRDLERLNYALEGVDICIHAA 99 (344)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHCCTTEEEEECCTTCHHHHHHHTTTCSEEEECC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhcCCCEEEEECCCCCHHHHHHHHhcCCEEEECC
Confidence 3589999999999999999999999 97 99999998765322 12 3478999999999999999999999999984
Q ss_pred cc----------------------hHhhhhhhcCCCEEEEEcccccccCCCCcccccchHHHHHHHHHHHHHHh------
Q 021928 171 EG----------------------FISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMA------ 222 (305)
Q Consensus 171 ~g----------------------~~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~~~~~~aE~~l~~------ 222 (305)
+. .+.+++.+.++++||++||..++.+. ..|.. .|..+|.+++.
T Consensus 100 a~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~~v~~~V~~SS~~~~~p~---~~Y~~-----sK~~~E~~~~~~~~~~~ 171 (344)
T 2gn4_A 100 ALKHVPIAEYNPLECIKTNIMGASNVINACLKNAISQVIALSTDKAANPI---NLYGA-----TKLCSDKLFVSANNFKG 171 (344)
T ss_dssp CCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGGGSSCC---SHHHH-----HHHHHHHHHHHGGGCCC
T ss_pred CCCCCCchhcCHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecCCccCCCc---cHHHH-----HHHHHHHHHHHHHHHhC
Confidence 31 14556777899999999998776542 23322 24456666653
Q ss_pred -CCCCEEEEecCCcccCCC-----------CCc-ceeeecCCCCCCccCHHHHHHHHHHHhhCCCCCCcEEEEecCCcCH
Q 021928 223 -SGIPYTIIRTGVLQNTPG-----------GKQ-GFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVVNGEEKV 289 (305)
Q Consensus 223 -~gi~~tilRPg~l~~~~~-----------~~~-~~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~~~~~~~~v~~g~~s~ 289 (305)
.+++++++|||.+.+..+ .++ .+.+..+.....+++++|+|++++.+++++. .+++|++.+++.++
T Consensus 172 ~~g~~~~~vRpg~v~g~~~~~i~~~~~~~~~g~~~~~i~~~~~~r~~i~v~D~a~~v~~~l~~~~-~g~~~~~~~~~~s~ 250 (344)
T 2gn4_A 172 SSQTQFSVVRYGNVVGSRGSVVPFFKKLVQNKASEIPITDIRMTRFWITLDEGVSFVLKSLKRMH-GGEIFVPKIPSMKM 250 (344)
T ss_dssp SSCCEEEEECCCEETTCTTSHHHHHHHHHHHTCCCEEESCTTCEEEEECHHHHHHHHHHHHHHCC-SSCEEEECCCEEEH
T ss_pred CCCcEEEEEEeccEECCCCCHHHHHHHHHHcCCCceEEeCCCeEEeeEEHHHHHHHHHHHHhhcc-CCCEEecCCCcEEH
Confidence 579999999999664322 112 2333334444678999999999999998653 57899998777789
Q ss_pred HHHHHHHHHh
Q 021928 290 SDWKKCFSRL 299 (305)
Q Consensus 290 ~d~~~~~~~l 299 (305)
.|+++.+.+.
T Consensus 251 ~el~~~i~~~ 260 (344)
T 2gn4_A 251 TDLAKALAPN 260 (344)
T ss_dssp HHHHHHHCTT
T ss_pred HHHHHHHHHh
Confidence 9999988753
|
| >1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=5.1e-22 Score=186.74 Aligned_cols=204 Identities=15% Similarity=0.122 Sum_probs=145.4
Q ss_pred CCEEEEEcCCChHHHHHHHHHH-hCCCeEEEEEcCcchh--------hhhc------------CCC---cEEeecCCCCH
Q 021928 98 RDAVLVTDGDSDIGQMVILSLI-VKRTRIKALVKDKRNA--------MESF------------GTY---VESMAGDASNK 153 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~-~~g~~V~~~~R~~~~~--------~~~~------------~~~---v~~v~~D~~d~ 153 (305)
+|+||||||+|+||++++++|+ ++|++|++++|+.... .+.+ ..+ ++++.+|+.|.
T Consensus 2 ~m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~ 81 (397)
T 1gy8_A 2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE 81 (397)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCCH
Confidence 3799999999999999999999 9999999999875432 1111 124 89999999999
Q ss_pred HHHHHHhc--C-ccEEEECCcc----------------------hHhhhhhhcCCCEEEEEcccccccCCCC--------
Q 021928 154 KFLKTALR--G-VRSIICPSEG----------------------FISNAGSLKGVQHVILLSQLSVYRGSGG-------- 200 (305)
Q Consensus 154 ~~~~~~~~--~-~d~Vi~~~~g----------------------~~~~~a~~~gv~~~V~iSS~~~~~~~~~-------- 200 (305)
+++.++++ + +|+|||+++. .+.+++++.++++||++||.+++.....
T Consensus 82 ~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~~ 161 (397)
T 1gy8_A 82 DFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVSTNAE 161 (397)
T ss_dssp HHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGTBSCCC-----CCC
T ss_pred HHHHHHHHhcCCCCEEEECCCccCcCcchhhHHHHHHHHhHHHHHHHHHHHHhCCCEEEEECCHHHhCCCCccccccccc
Confidence 99999998 6 9999998431 0345567788999999999988754320
Q ss_pred -------cccccchHHHHHHHHHHHHHHh----CCCCEEEEecCCcccCCC---------------------------CC
Q 021928 201 -------IQALMKGNARKLAEQDESMLMA----SGIPYTIIRTGVLQNTPG---------------------------GK 242 (305)
Q Consensus 201 -------~~~~~~~~~~~~~~~aE~~l~~----~gi~~tilRPg~l~~~~~---------------------------~~ 242 (305)
..+...| ...|..+|.+++. .++++++|||+.+++... .+
T Consensus 162 ~~~E~~~~~p~~~Y--~~sK~~~e~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 239 (397)
T 1gy8_A 162 PIDINAKKSPESPY--GESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDIAPD 239 (397)
T ss_dssp CBCTTSCCBCSSHH--HHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHHHHHHSCC
T ss_pred CcCccCCCCCCCch--HHHHHHHHHHHHHHHHHHCCcEEEEeccceeCCCccccccccccchhHHHHHHHHHHHHHHHhc
Confidence 0111122 2234445655543 599999999998653210 00
Q ss_pred c------------ceee-e------cCCCCCCccCHHHHHHHHHHHhhCCCCC-----C---cEEEEecCC-cCHHHHHH
Q 021928 243 Q------------GFQF-E------EGCAANGSLSKEDAAFICVEALESIPQT-----G---LIFEVVNGE-EKVSDWKK 294 (305)
Q Consensus 243 ~------------~~~~-~------~~~~~~~~Is~~DvA~~iv~~l~~~~~~-----~---~~~~v~~g~-~s~~d~~~ 294 (305)
. .+.+ + .++....+|+++|+|++++.+++.+... + ++||+++++ .++.|+++
T Consensus 240 ~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~v~Dva~a~~~~l~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~ 319 (397)
T 1gy8_A 240 QRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNLGTSRGYSVREVIE 319 (397)
T ss_dssp -----------CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEESCSCCEEHHHHHH
T ss_pred CccccccccccCCCceeecCcccCCCCCeeEeeEeHHHHHHHHHHHHhcccccccccccCCCcEEEeCCCCcccHHHHHH
Confidence 0 0111 1 2233457899999999999999764332 3 799999765 68999999
Q ss_pred HHHHhhhhc
Q 021928 295 CFSRLMEKT 303 (305)
Q Consensus 295 ~~~~l~~~~ 303 (305)
.+.++.+.+
T Consensus 320 ~i~~~~g~~ 328 (397)
T 1gy8_A 320 VARKTTGHP 328 (397)
T ss_dssp HHHHHHCCC
T ss_pred HHHHHhCCC
Confidence 999988754
|
| >1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=2.7e-22 Score=183.22 Aligned_cols=191 Identities=11% Similarity=0.124 Sum_probs=142.6
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhc--CccEEEECCc--c-
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--GVRSIICPSE--G- 172 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~--~~d~Vi~~~~--g- 172 (305)
+|+||||||+|+||++++++|+++|++|+++.|+. .+|+.|.+++.++++ ++|+|||+++ .
T Consensus 3 ~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~--------------~~D~~d~~~~~~~~~~~~~d~vih~a~~~~~ 68 (321)
T 1e6u_A 3 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD--------------ELNLLDSRAVHDFFASERIDQVYLAAAKVGG 68 (321)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT--------------TCCTTCHHHHHHHHHHHCCSEEEECCCCCCC
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCc--------------cCCccCHHHHHHHHHhcCCCEEEEcCeecCC
Confidence 47999999999999999999999999999988763 279999999999999 9999999832 1
Q ss_pred --------------------hHhhhhhhcCCCEEEEEcccccccCCCC------------cccccchHHHHHHHHHHHHH
Q 021928 173 --------------------FISNAGSLKGVQHVILLSQLSVYRGSGG------------IQALMKGNARKLAEQDESML 220 (305)
Q Consensus 173 --------------------~~~~~a~~~gv~~~V~iSS~~~~~~~~~------------~~~~~~~~~~~~~~~aE~~l 220 (305)
.+.+++++.++++||++||..+|..... ..+.. ..+...|..+|.++
T Consensus 69 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~-~~Y~~sK~~~E~~~ 147 (321)
T 1e6u_A 69 IVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTN-EPYAIAKIAGIKLC 147 (321)
T ss_dssp HHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGSCTTCCSSBCGGGTTSSCCCGGG-HHHHHHHHHHHHHH
T ss_pred cchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccHHHcCCCCCCCcCccccccCCCCCCC-CccHHHHHHHHHHH
Confidence 1345677789999999999998853211 11100 11223345566666
Q ss_pred Hh----CCCCEEEEecCCcccCCCC----------------------C-ccee-eecCCCCCCccCHHHHHHHHHHHhhC
Q 021928 221 MA----SGIPYTIIRTGVLQNTPGG----------------------K-QGFQ-FEEGCAANGSLSKEDAAFICVEALES 272 (305)
Q Consensus 221 ~~----~gi~~tilRPg~l~~~~~~----------------------~-~~~~-~~~~~~~~~~Is~~DvA~~iv~~l~~ 272 (305)
+. .++++++|||+.+.+.... + ..+. ++.++....+|+++|+|++++.++++
T Consensus 148 ~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~i~v~Dva~~~~~~~~~ 227 (321)
T 1e6u_A 148 ESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAAASIHVMEL 227 (321)
T ss_dssp HHHHHHHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEEHHHHHHHHHHHHHS
T ss_pred HHHHHHhCCCEEEEEeCCcCCcCCCCCCCCCccHHHHHHHHHHhhhcCCCceEEcCCCCEEEEeEEHHHHHHHHHHHHhC
Confidence 54 5999999999996543211 0 1122 23445557899999999999999987
Q ss_pred CCC--------CCcEEEEecCC-cCHHHHHHHHHHhhhhc
Q 021928 273 IPQ--------TGLIFEVVNGE-EKVSDWKKCFSRLMEKT 303 (305)
Q Consensus 273 ~~~--------~~~~~~v~~g~-~s~~d~~~~~~~l~~~~ 303 (305)
+.. .+++||+++++ .++.|+++.+.+..+.+
T Consensus 228 ~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~ 267 (321)
T 1e6u_A 228 AHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYK 267 (321)
T ss_dssp CHHHHHHTSBTTBCCEEESCSCCEEHHHHHHHHHHHHTCC
T ss_pred cccccccccccCCceEEeCCCCCccHHHHHHHHHHHhCCC
Confidence 654 26899999875 69999999999998764
|
| >1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=2.2e-21 Score=180.01 Aligned_cols=202 Identities=12% Similarity=0.092 Sum_probs=146.0
Q ss_pred CEEEEEcCCChHHHHHHHHHHhC-CCeEEEEEcCcc--hhhh--hc--CCCcEEeecCCCCHHHHHHHhc--CccEEEEC
Q 021928 99 DAVLVTDGDSDIGQMVILSLIVK-RTRIKALVKDKR--NAME--SF--GTYVESMAGDASNKKFLKTALR--GVRSIICP 169 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~R~~~--~~~~--~~--~~~v~~v~~D~~d~~~~~~~~~--~~d~Vi~~ 169 (305)
|+||||||+||||++++++|++. |++|++++|+.. .... .+ ..+++++.+|++|.+++.++++ ++|+|||+
T Consensus 1 MkvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~ 80 (361)
T 1kew_A 1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQYQPDAVMHL 80 (361)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred CEEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhhhhhhcCCCeEEEECCCCCHHHHHHHHhhcCCCEEEEC
Confidence 57999999999999999999998 799999998752 1111 11 2468999999999999999998 89999998
Q ss_pred Ccc----------------------hHhhhhhhc--CCC-------EEEEEcccccccCCC------------------C
Q 021928 170 SEG----------------------FISNAGSLK--GVQ-------HVILLSQLSVYRGSG------------------G 200 (305)
Q Consensus 170 ~~g----------------------~~~~~a~~~--gv~-------~~V~iSS~~~~~~~~------------------~ 200 (305)
++. .+.+++... +++ +||++||.++|.... .
T Consensus 81 A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~~~~~~~~E~~~ 160 (361)
T 1kew_A 81 AAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTA 160 (361)
T ss_dssp CSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBCTTSC
T ss_pred CCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHHHhCCCcccccccccccCCCCCCCCC
Confidence 431 034456666 887 999999998875322 1
Q ss_pred cccccchHHHHHHHHHHHHHHh----CCCCEEEEecCCcccCCCC--------------Cccee-eecCCCCCCccCHHH
Q 021928 201 IQALMKGNARKLAEQDESMLMA----SGIPYTIIRTGVLQNTPGG--------------KQGFQ-FEEGCAANGSLSKED 261 (305)
Q Consensus 201 ~~~~~~~~~~~~~~~aE~~l~~----~gi~~tilRPg~l~~~~~~--------------~~~~~-~~~~~~~~~~Is~~D 261 (305)
..+...| ...|..+|.+++. .++++++|||+.+.+.... +.... ++.+.....+++++|
T Consensus 161 ~~~~~~Y--~~sK~~~e~~~~~~~~~~gi~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D 238 (361)
T 1kew_A 161 YAPSSPY--SASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVED 238 (361)
T ss_dssp CCCCSHH--HHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTTSHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHH
T ss_pred CCCCCcc--HHHHHHHHHHHHHHHHHhCCcEEEEeeceeECCCCCcccHHHHHHHHHHcCCCceEcCCCceeEeeEEHHH
Confidence 1111222 2234445655543 5999999999996543211 11111 233444567899999
Q ss_pred HHHHHHHHhhCCCCCCcEEEEecCC-cCHHHHHHHHHHhhhhc
Q 021928 262 AAFICVEALESIPQTGLIFEVVNGE-EKVSDWKKCFSRLMEKT 303 (305)
Q Consensus 262 vA~~iv~~l~~~~~~~~~~~v~~g~-~s~~d~~~~~~~l~~~~ 303 (305)
+|++++.+++++ ..+++|+++++. .++.|+++.+.++.+.+
T Consensus 239 va~a~~~~~~~~-~~g~~~~v~~~~~~s~~e~~~~i~~~~g~~ 280 (361)
T 1kew_A 239 HARALHMVVTEG-KAGETYNIGGHNEKKNLDVVFTICDLLDEI 280 (361)
T ss_dssp HHHHHHHHHHHC-CTTCEEEECCCCEEEHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCC-CCCCEEEecCCCeeeHHHHHHHHHHHhCCc
Confidence 999999999765 457899999876 68999999999988764
|
| >1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.88 E-value=6.8e-22 Score=178.37 Aligned_cols=188 Identities=15% Similarity=0.121 Sum_probs=142.7
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhc--CccEEEECCcc
Q 021928 95 PEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--GVRSIICPSEG 172 (305)
Q Consensus 95 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~--~~d~Vi~~~~g 172 (305)
..+.++||||||+||||++++++|+++|++|++++|+ .+|+.|.+++.++++ ++|+|||+++.
T Consensus 9 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~---------------~~Dl~d~~~~~~~~~~~~~d~vih~A~~ 73 (292)
T 1vl0_A 9 HHHHMKILITGANGQLGREIQKQLKGKNVEVIPTDVQ---------------DLDITNVLAVNKFFNEKKPNVVINCAAH 73 (292)
T ss_dssp ---CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTT---------------TCCTTCHHHHHHHHHHHCCSEEEECCCC
T ss_pred ccccceEEEECCCChHHHHHHHHHHhCCCeEEeccCc---------------cCCCCCHHHHHHHHHhcCCCEEEECCcc
Confidence 4456999999999999999999999999999999996 379999999999998 79999998431
Q ss_pred ----------------------hHhhhhhhcCCCEEEEEcccccccCCCC--------cccccchHHHHHHHHHHHHHHh
Q 021928 173 ----------------------FISNAGSLKGVQHVILLSQLSVYRGSGG--------IQALMKGNARKLAEQDESMLMA 222 (305)
Q Consensus 173 ----------------------~~~~~a~~~gv~~~V~iSS~~~~~~~~~--------~~~~~~~~~~~~~~~aE~~l~~ 222 (305)
.+.+++.+.++ +||++||.++|..... ..+... +...|..+|.+++.
T Consensus 74 ~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~-~iv~~SS~~v~~~~~~~~~~E~~~~~~~~~--Y~~sK~~~E~~~~~ 150 (292)
T 1vl0_A 74 TAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGA-EIVQISTDYVFDGEAKEPITEFDEVNPQSA--YGKTKLEGENFVKA 150 (292)
T ss_dssp CCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGSCSCCSSCBCTTSCCCCCSH--HHHHHHHHHHHHHH
T ss_pred CCHHHHhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEechHHeECCCCCCCCCCCCCCCCccH--HHHHHHHHHHHHHh
Confidence 13455666788 9999999988864321 111112 23345668888888
Q ss_pred CCCCEEEEecCCcccCCCC-----------CcceeeecCCCCCCccCHHHHHHHHHHHhhCCCCCCcEEEEecCC-cCHH
Q 021928 223 SGIPYTIIRTGVLQNTPGG-----------KQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVVNGE-EKVS 290 (305)
Q Consensus 223 ~gi~~tilRPg~l~~~~~~-----------~~~~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~~~~~~~~v~~g~-~s~~ 290 (305)
...+++++||+.+.+.... +..... .++....+++++|+|++++.+++++ .+++|++++++ .++.
T Consensus 151 ~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~v~Dva~~~~~~~~~~--~~~~~~i~~~~~~s~~ 227 (292)
T 1vl0_A 151 LNPKYYIVRTAWLYGDGNNFVKTMINLGKTHDELKV-VHDQVGTPTSTVDLARVVLKVIDEK--NYGTFHCTCKGICSWY 227 (292)
T ss_dssp HCSSEEEEEECSEESSSSCHHHHHHHHHHHCSEEEE-ESSCEECCEEHHHHHHHHHHHHHHT--CCEEEECCCBSCEEHH
T ss_pred hCCCeEEEeeeeeeCCCcChHHHHHHHHhcCCcEEe-ecCeeeCCccHHHHHHHHHHHHhcC--CCcEEEecCCCCccHH
Confidence 7889999999997643110 111111 2345578899999999999999876 67899999865 6899
Q ss_pred HHHHHHHHhhhhc
Q 021928 291 DWKKCFSRLMEKT 303 (305)
Q Consensus 291 d~~~~~~~l~~~~ 303 (305)
|+++.+.++.+.+
T Consensus 228 e~~~~i~~~~g~~ 240 (292)
T 1vl0_A 228 DFAVEIFRLTGID 240 (292)
T ss_dssp HHHHHHHHHHCCC
T ss_pred HHHHHHHHHhCCC
Confidence 9999999998764
|
| >1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.88 E-value=2.3e-21 Score=181.24 Aligned_cols=202 Identities=14% Similarity=0.028 Sum_probs=145.7
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcch-----hhhh-------cCCCcEEeecCCCCHHHHHHHhcC--c
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-----AMES-------FGTYVESMAGDASNKKFLKTALRG--V 163 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~-----~~~~-------~~~~v~~v~~D~~d~~~~~~~~~~--~ 163 (305)
+|+||||||+|+||++++++|+++|++|++++|++.. .... ...+++++.+|+.|.+++.+++++ +
T Consensus 24 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 103 (375)
T 1t2a_A 24 RNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKP 103 (375)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHHCC
T ss_pred CcEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHHHhhhhccccCCCceEEEccCCCHHHHHHHHHhcCC
Confidence 3799999999999999999999999999999998643 1111 124688999999999999999986 5
Q ss_pred cEEEECCcc----------------------hHhhhhhhcCC---CEEEEEcccccccCCCC--------cccccchHHH
Q 021928 164 RSIICPSEG----------------------FISNAGSLKGV---QHVILLSQLSVYRGSGG--------IQALMKGNAR 210 (305)
Q Consensus 164 d~Vi~~~~g----------------------~~~~~a~~~gv---~~~V~iSS~~~~~~~~~--------~~~~~~~~~~ 210 (305)
|+|||+++. .+.+++.+.++ ++||++||..+|..... ..+...|.
T Consensus 104 d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~E~~~~~~~~~Y~-- 181 (375)
T 1t2a_A 104 TEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYG-- 181 (375)
T ss_dssp SEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSSSSBCTTSCCCCCSHHH--
T ss_pred CEEEECCCcccccccccCHHHHHHHHHHHHHHHHHHHHHhCCCccceEEEecchhhhCCCCCCCCCccCCCCCCChhH--
Confidence 999998431 13445666777 89999999988864221 11122222
Q ss_pred HHHHHHHHHHH----hCCCCEEEEecCCcccCC-CC----------------Cc--ceeeecCCCCCCccCHHHHHHHHH
Q 021928 211 KLAEQDESMLM----ASGIPYTIIRTGVLQNTP-GG----------------KQ--GFQFEEGCAANGSLSKEDAAFICV 267 (305)
Q Consensus 211 ~~~~~aE~~l~----~~gi~~tilRPg~l~~~~-~~----------------~~--~~~~~~~~~~~~~Is~~DvA~~iv 267 (305)
..|..+|.+++ +.+++++++||..+.+.. .. +. ...++.++....+++++|+|++++
T Consensus 182 ~sK~~~e~~~~~~~~~~~~~~~i~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~Dva~a~~ 261 (375)
T 1t2a_A 182 AAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEAMW 261 (375)
T ss_dssp HHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECCEEHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCCEEEEecccccCCCCCCCcchHHHHHHHHHHHcCCCceeEeCCCCceeeeEEHHHHHHHHH
Confidence 23444555554 358999999987744221 10 11 122344455678999999999999
Q ss_pred HHhhCCCCCCcEEEEecCC-cCHHHHHHHHHHhhhhc
Q 021928 268 EALESIPQTGLIFEVVNGE-EKVSDWKKCFSRLMEKT 303 (305)
Q Consensus 268 ~~l~~~~~~~~~~~v~~g~-~s~~d~~~~~~~l~~~~ 303 (305)
.+++++. +.+|++++++ .++.|+++.+.++.+.+
T Consensus 262 ~~~~~~~--~~~~ni~~~~~~s~~e~~~~i~~~~g~~ 296 (375)
T 1t2a_A 262 LMLQNDE--PEDFVIATGEVHSVREFVEKSFLHIGKT 296 (375)
T ss_dssp HHHHSSS--CCCEEECCSCCEEHHHHHHHHHHHTTCC
T ss_pred HHHhcCC--CceEEEeCCCcccHHHHHHHHHHHhCCC
Confidence 9998764 3789999876 58999999999988763
|
| >2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=9.6e-22 Score=182.59 Aligned_cols=200 Identities=16% Similarity=0.086 Sum_probs=143.7
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCC-CeEEEEEcCcchh-hhhcCCCcEEeecCCCCHHHHHHHhc-----CccEEEEC
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNA-MESFGTYVESMAGDASNKKFLKTALR-----GVRSIICP 169 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~R~~~~~-~~~~~~~v~~v~~D~~d~~~~~~~~~-----~~d~Vi~~ 169 (305)
++|+||||||+|+||++++++|+++| ++|+++.|++... ...+. .+. +.+|+.|.+.+.++++ ++|+|||+
T Consensus 45 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~-~~~-~~~d~~~~~~~~~~~~~~~~~~~d~Vih~ 122 (357)
T 2x6t_A 45 EGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLV-DLN-IADYMDKEDFLIQIMAGEEFGDVEAIFHE 122 (357)
T ss_dssp ---CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGGGGGTT-TSC-CSEEEEHHHHHHHHHTTCCCSSCCEEEEC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcchhhccc-Cce-EeeecCcHHHHHHHHhhcccCCCCEEEEC
Confidence 35899999999999999999999999 9999999986542 11222 244 7899999999999987 59999998
Q ss_pred Ccc--------------------hHhhhhhhcCCCEEEEEcccccccCCCCc--------ccccchHHHHHHHHHHHHHH
Q 021928 170 SEG--------------------FISNAGSLKGVQHVILLSQLSVYRGSGGI--------QALMKGNARKLAEQDESMLM 221 (305)
Q Consensus 170 ~~g--------------------~~~~~a~~~gv~~~V~iSS~~~~~~~~~~--------~~~~~~~~~~~~~~aE~~l~ 221 (305)
++. .+.+++.+.++ +||++||..+|...... .+... +...|..+|.+++
T Consensus 123 A~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~-r~V~~SS~~v~g~~~~~~~~E~~~~~p~~~--Y~~sK~~~E~~~~ 199 (357)
T 2x6t_A 123 GACSSTTEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAATYGGRTSDFIESREYEKPLNV--FGYSKFLFDEYVR 199 (357)
T ss_dssp CSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHTC-CEEEEEEGGGGCSCSSCCCSSGGGCCCSSH--HHHHHHHHHHHHH
T ss_pred CcccCCccCCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcchHHhCCCCCCCcCCcCCCCCCCh--hHHHHHHHHHHHH
Confidence 331 14456677788 99999999888643220 11111 2223445666654
Q ss_pred h----CCCCEEEEecCCcccCCCC------------------Ccce-eeecCCC-CCCccCHHHHHHHHHHHhhCCCCCC
Q 021928 222 A----SGIPYTIIRTGVLQNTPGG------------------KQGF-QFEEGCA-ANGSLSKEDAAFICVEALESIPQTG 277 (305)
Q Consensus 222 ~----~gi~~tilRPg~l~~~~~~------------------~~~~-~~~~~~~-~~~~Is~~DvA~~iv~~l~~~~~~~ 277 (305)
. .++++++|||+.+.+.... +... .++.+.. ...+++++|+|++++.+++++. +
T Consensus 200 ~~~~~~g~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ai~~~~~~~~--~ 277 (357)
T 2x6t_A 200 QILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGV--S 277 (357)
T ss_dssp HHGGGCSSCEEEEEECEEESSSCTTCGGGSCHHHHHHHHHHTTCCCEEETTGGGCEECEEEHHHHHHHHHHHHHHCC--C
T ss_pred HHHHHcCCCEEEEecCeEECCCCCCCcccchHHHHHHHHHHcCCCcEEeCCCCcceEccEEHHHHHHHHHHHHhcCC--C
Confidence 3 5899999999996533211 1111 1223334 5678999999999999998766 8
Q ss_pred cEEEEecCC-cCHHHHHHHHHHhhhhc
Q 021928 278 LIFEVVNGE-EKVSDWKKCFSRLMEKT 303 (305)
Q Consensus 278 ~~~~v~~g~-~s~~d~~~~~~~l~~~~ 303 (305)
++|++++++ .++.|+++.+.++.+.+
T Consensus 278 ~~~~i~~~~~~s~~e~~~~i~~~~g~~ 304 (357)
T 2x6t_A 278 GIFNLGTGRAESFQAVADATLAYHKKG 304 (357)
T ss_dssp EEEEESCSCCEEHHHHHHHHHHHHTCC
T ss_pred CeEEecCCCcccHHHHHHHHHHHcCCC
Confidence 899999865 68999999999998764
|
| >3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} | Back alignment and structure |
|---|
Probab=99.88 E-value=5e-22 Score=180.90 Aligned_cols=192 Identities=16% Similarity=0.079 Sum_probs=139.2
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcch---hhhh-----cCCCcEEeecCCCCHHHHHHHhcCccEEEE
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN---AMES-----FGTYVESMAGDASNKKFLKTALRGVRSIIC 168 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~---~~~~-----~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~ 168 (305)
++|+||||||||+||++++++|+++|++|++++|++.. .... ...+++++.+|+. ++|+|||
T Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~----------~~d~vi~ 75 (321)
T 3vps_A 6 LKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGKFLEKPVLELEERDLS----------DVRLVYH 75 (321)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSSCCSSCCTTSSEEECSCGGGCCHHHHT----------TEEEEEE
T ss_pred CCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcccccchhhhhhhccCCCeeEEeCccc----------cCCEEEE
Confidence 46899999999999999999999999999999998751 1111 1135666777665 8999999
Q ss_pred CCcc---------------------hHhhhhhhcCCCEEEEEcccccccCCCC--------cccccchHHHHHHHHHHHH
Q 021928 169 PSEG---------------------FISNAGSLKGVQHVILLSQLSVYRGSGG--------IQALMKGNARKLAEQDESM 219 (305)
Q Consensus 169 ~~~g---------------------~~~~~a~~~gv~~~V~iSS~~~~~~~~~--------~~~~~~~~~~~~~~~aE~~ 219 (305)
+++. .+.+++++.++++||++||.++|..... ..+... +...|..+|.+
T Consensus 76 ~a~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~v~~~v~~SS~~v~~~~~~~~~~E~~~~~p~~~--Y~~sK~~~E~~ 153 (321)
T 3vps_A 76 LASHKSVPRSFKQPLDYLDNVDSGRHLLALCTSVGVPKVVVGSTCEVYGQADTLPTPEDSPLSPRSP--YAASKVGLEMV 153 (321)
T ss_dssp CCCCCCHHHHTTSTTTTHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSH--HHHHHHHHHHH
T ss_pred CCccCChHHHHhCHHHHHHHHHHHHHHHHHHHHcCCCeEEEecCHHHhCCCCCCCCCCCCCCCCCCh--hHHHHHHHHHH
Confidence 8431 1456677889999999999998864322 111112 22234456666
Q ss_pred HHh----CCC-CEEEEecCCcccCCCC--------------Ccce-eeecCCCCCCccCHHHHHHHHHHHhhCCCCCCcE
Q 021928 220 LMA----SGI-PYTIIRTGVLQNTPGG--------------KQGF-QFEEGCAANGSLSKEDAAFICVEALESIPQTGLI 279 (305)
Q Consensus 220 l~~----~gi-~~tilRPg~l~~~~~~--------------~~~~-~~~~~~~~~~~Is~~DvA~~iv~~l~~~~~~~~~ 279 (305)
++. .++ +++++||+.+.+.... +..+ .++.++....+++++|+|++++.++.++.. + +
T Consensus 154 ~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~-g-~ 231 (321)
T 3vps_A 154 AGAHQRASVAPEVGIVRFFNVYGPGERPDALVPRLCANLLTRNELPVEGDGEQRRDFTYITDVVDKLVALANRPLP-S-V 231 (321)
T ss_dssp HHHHHHSSSSCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHSEEEEETTSCCEECEEEHHHHHHHHHHGGGSCCC-S-E
T ss_pred HHHHHHHcCCCceEEEEeccccCcCCCCCChHHHHHHHHHcCCCeEEeCCCCceEceEEHHHHHHHHHHHHhcCCC-C-e
Confidence 554 689 9999999996643221 1111 223455667899999999999999988766 6 9
Q ss_pred EEEecCC-cCHHHHHHHHHHhhhhc
Q 021928 280 FEVVNGE-EKVSDWKKCFSRLMEKT 303 (305)
Q Consensus 280 ~~v~~g~-~s~~d~~~~~~~l~~~~ 303 (305)
|++++++ .++.|+++.+. ..+.+
T Consensus 232 ~~i~~~~~~s~~e~~~~i~-~~g~~ 255 (321)
T 3vps_A 232 VNFGSGQSLSVNDVIRILQ-ATSPA 255 (321)
T ss_dssp EEESCSCCEEHHHHHHHHH-TTCTT
T ss_pred EEecCCCcccHHHHHHHHH-HhCCC
Confidence 9999876 69999999999 87764
|
| >1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A | Back alignment and structure |
|---|
Probab=99.88 E-value=9.4e-22 Score=180.64 Aligned_cols=204 Identities=11% Similarity=0.013 Sum_probs=143.1
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh-------cCCCcEEe-ecCCCCHHHHHHHhcCccEEEE
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------FGTYVESM-AGDASNKKFLKTALRGVRSIIC 168 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~-------~~~~v~~v-~~D~~d~~~~~~~~~~~d~Vi~ 168 (305)
++|+||||||+|+||++++++|+++|++|++++|+.++.... .+.+++++ .+|++|.+++.++++++|+|||
T Consensus 10 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih 89 (342)
T 1y1p_A 10 EGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAGVAH 89 (342)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSEEEE
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHcCCCEEEE
Confidence 458999999999999999999999999999999987653211 13568888 8999999999999999999999
Q ss_pred CCcc-------------------hHhhhhh-hcCCCEEEEEcccccccCCCC----------------------------
Q 021928 169 PSEG-------------------FISNAGS-LKGVQHVILLSQLSVYRGSGG---------------------------- 200 (305)
Q Consensus 169 ~~~g-------------------~~~~~a~-~~gv~~~V~iSS~~~~~~~~~---------------------------- 200 (305)
+++. .+.+++. ..++++||++||..++.....
T Consensus 90 ~A~~~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~~ 169 (342)
T 1y1p_A 90 IASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPESDP 169 (342)
T ss_dssp CCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHHHHHSCTTST
T ss_pred eCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccHHHhcCCCCCCCCcccCccccCchhhhhhcccccccc
Confidence 8431 1344455 467899999999988732110
Q ss_pred cccccchHHHHHHHHHHHHHHh------CCCCEEEEecCCcccCCCCC-----------------cceeeecCCCCCCcc
Q 021928 201 IQALMKGNARKLAEQDESMLMA------SGIPYTIIRTGVLQNTPGGK-----------------QGFQFEEGCAANGSL 257 (305)
Q Consensus 201 ~~~~~~~~~~~~~~~aE~~l~~------~gi~~tilRPg~l~~~~~~~-----------------~~~~~~~~~~~~~~I 257 (305)
..+...| ...|..+|.+++. .+++++++||+.+.+..... +...+........++
T Consensus 170 ~~~~~~Y--~~sK~~~e~~~~~~~~~~~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 247 (342)
T 1y1p_A 170 QKSLWVY--AASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPALALMPPQYYV 247 (342)
T ss_dssp THHHHHH--HHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTTCCCHHHHTCCSEEEE
T ss_pred ccchHHH--HHHHHHHHHHHHHHHHhcCCCceEEEEcCCceECCCCCCCCCCccHHHHHHHHHcCCCccccccCCcCCEe
Confidence 0111112 2234445655542 27889999999955432110 000000111345789
Q ss_pred CHHHHHHHHHHHhhCCCCCCcEEEEecCCcCHHHHHHHHHHhhhh
Q 021928 258 SKEDAAFICVEALESIPQTGLIFEVVNGEEKVSDWKKCFSRLMEK 302 (305)
Q Consensus 258 s~~DvA~~iv~~l~~~~~~~~~~~v~~g~~s~~d~~~~~~~l~~~ 302 (305)
+++|+|++++.+++++...++.+...++..++.|+++.+.++.+.
T Consensus 248 ~v~Dva~a~~~~~~~~~~~g~~~~~~g~~~s~~e~~~~i~~~~~~ 292 (342)
T 1y1p_A 248 SAVDIGLLHLGCLVLPQIERRRVYGTAGTFDWNTVLATFRKLYPS 292 (342)
T ss_dssp EHHHHHHHHHHHHHCTTCCSCEEEECCEEECHHHHHHHHHHHCTT
T ss_pred EHHHHHHHHHHHHcCcccCCceEEEeCCCCCHHHHHHHHHHHCCC
Confidence 999999999999987665566665555557999999999998875
|
| >4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.88 E-value=4.2e-22 Score=189.81 Aligned_cols=197 Identities=16% Similarity=0.124 Sum_probs=142.1
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchh------------------hhhcCCCcEEeecCCCCHHHHH
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA------------------MESFGTYVESMAGDASNKKFLK 157 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~------------------~~~~~~~v~~v~~D~~d~~~~~ 157 (305)
..+|+||||||+|+||++++++|++.|++|++++|++... .+....+++++.+|+.|.+++.
T Consensus 67 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~ 146 (427)
T 4f6c_A 67 RPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV 146 (427)
T ss_dssp CCCEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CCCC
T ss_pred CCCCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCcccCC
Confidence 4468999999999999999999999999999999998621 1112357999999999988777
Q ss_pred HHhcCccEEEECCcc-------------------hHhhhhhhcCCCEEEEEcccccccCC-------------CC---cc
Q 021928 158 TALRGVRSIICPSEG-------------------FISNAGSLKGVQHVILLSQLSVYRGS-------------GG---IQ 202 (305)
Q Consensus 158 ~~~~~~d~Vi~~~~g-------------------~~~~~a~~~gv~~~V~iSS~~~~~~~-------------~~---~~ 202 (305)
++.++|+|||+++. .+.+++.+ ++++||++||.++ ... .. ..
T Consensus 147 -~~~~~d~Vih~A~~~~~~~~~~~~~~~Nv~g~~~l~~aa~~-~~~~~v~~SS~~~-G~~~~~~~~~~~~~E~~~~~~~~ 223 (427)
T 4f6c_A 147 -LPENMDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQ-HHARLIYVSTISV-GTYFDIDTEDVTFSEADVYKGQL 223 (427)
T ss_dssp -CSSCCSEEEECCCCC-------CHHHHHHHHHHHHHHHHHH-TTCEEEEEEEGGG-GSEECSSCSCCEECTTCSCSSCC
T ss_pred -CcCCCCEEEECCcccCCCCCHHHHHHHHHHHHHHHHHHHHh-cCCcEEEECchHh-CCCccCCCCCccccccccccCCC
Confidence 88899999998431 14455666 8899999999988 210 00 11
Q ss_pred cccchHHHHHHHHHHHHHHh---CCCCEEEEecCCcccCCCCCc-------------------ceeee--cCCCCCCccC
Q 021928 203 ALMKGNARKLAEQDESMLMA---SGIPYTIIRTGVLQNTPGGKQ-------------------GFQFE--EGCAANGSLS 258 (305)
Q Consensus 203 ~~~~~~~~~~~~~aE~~l~~---~gi~~tilRPg~l~~~~~~~~-------------------~~~~~--~~~~~~~~Is 258 (305)
....| ...|..+|.++++ .+++++++|||.+.+...... ...++ .++....+++
T Consensus 224 ~~~~Y--~~sK~~~E~~~~~~~~~g~~~~ivRpg~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 301 (427)
T 4f6c_A 224 LTSPY--TRSKFYSELKVLEAVNNGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIGVSMAEMPVDFSF 301 (427)
T ss_dssp CCSHH--HHHHHHHHHHHHHHHHTTCCEEEEEECCEESCSSSCCCCTTGGGCHHHHHHHHHHHSSEEEHHHHTCEECCEE
T ss_pred CCCch--HHHHHHHHHHHHHHHHcCCCEEEEeCCeeecCCCCCccccCcchHHHHHHHHHHHhcCCCCCccccceEEEee
Confidence 11222 2234556776665 899999999999664332110 00111 2355578999
Q ss_pred HHHHHHHHHHHhhCCCCCCcEEEEecCC-cCHHHHHHHHHH
Q 021928 259 KEDAAFICVEALESIPQTGLIFEVVNGE-EKVSDWKKCFSR 298 (305)
Q Consensus 259 ~~DvA~~iv~~l~~~~~~~~~~~v~~g~-~s~~d~~~~~~~ 298 (305)
++|+|++++.++..+. .+++|++++++ .++.|+++.+.+
T Consensus 302 v~DvA~ai~~~~~~~~-~g~~~~l~~~~~~s~~el~~~i~~ 341 (427)
T 4f6c_A 302 VDTTARQIVALAQVNT-PQIIYHVLSPNKMPVKSLLECVKR 341 (427)
T ss_dssp HHHHHHHHHHHTTSCC-CCSEEEESCSCCEEHHHHHHHHHS
T ss_pred HHHHHHHHHHHHcCCC-CCCEEEecCCCCCcHHHHHHHHHH
Confidence 9999999999998877 78999999876 588999888875
|
| >1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=6.2e-22 Score=179.05 Aligned_cols=189 Identities=20% Similarity=0.162 Sum_probs=143.9
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcC--ccEEEECCcc----
Q 021928 99 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRG--VRSIICPSEG---- 172 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~--~d~Vi~~~~g---- 172 (305)
|+||||||+|+||++++++|+ +|++|++++|++ .++.+|+.|.+++.+++++ +|+|||+++.
T Consensus 1 m~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~-----------~~~~~D~~d~~~~~~~~~~~~~d~vih~a~~~~~~ 68 (299)
T 1n2s_A 1 MNILLFGKTGQVGWELQRSLA-PVGNLIALDVHS-----------KEFCGDFSNPKGVAETVRKLRPDVIVNAAAHTAVD 68 (299)
T ss_dssp CEEEEECTTSHHHHHHHHHTT-TTSEEEEECTTC-----------SSSCCCTTCHHHHHHHHHHHCCSEEEECCCCCCHH
T ss_pred CeEEEECCCCHHHHHHHHHhh-cCCeEEEecccc-----------ccccccCCCHHHHHHHHHhcCCCEEEECcccCCHh
Confidence 589999999999999999999 899999999986 2467999999999999987 9999998431
Q ss_pred ------------------hHhhhhhhcCCCEEEEEcccccccCCCC--------cccccchHHHHHHHHHHHHHHhCCCC
Q 021928 173 ------------------FISNAGSLKGVQHVILLSQLSVYRGSGG--------IQALMKGNARKLAEQDESMLMASGIP 226 (305)
Q Consensus 173 ------------------~~~~~a~~~gv~~~V~iSS~~~~~~~~~--------~~~~~~~~~~~~~~~aE~~l~~~gi~ 226 (305)
.+.+++++.++ +||++||..+|..... ..+... +...|..+|.++++...+
T Consensus 69 ~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~--Y~~sK~~~E~~~~~~~~~ 145 (299)
T 1n2s_A 69 KAESEPELAQLLNATSVEAIAKAANETGA-WVVHYSTDYVFPGTGDIPWQETDATSPLNV--YGKTKLAGEKALQDNCPK 145 (299)
T ss_dssp HHTTCHHHHHHHHTHHHHHHHHHHTTTTC-EEEEEEEGGGSCCCTTCCBCTTSCCCCSSH--HHHHHHHHHHHHHHHCSS
T ss_pred hhhcCHHHHHHHHHHHHHHHHHHHHHcCC-cEEEEecccEEeCCCCCCCCCCCCCCCccH--HHHHHHHHHHHHHHhCCC
Confidence 13455667777 8999999988864321 111111 233456788888887779
Q ss_pred EEEEecCCcccCCCC------------CcceeeecCCCCCCccCHHHHHHHHHHHhhCCC--C-CCcEEEEecCC-cCHH
Q 021928 227 YTIIRTGVLQNTPGG------------KQGFQFEEGCAANGSLSKEDAAFICVEALESIP--Q-TGLIFEVVNGE-EKVS 290 (305)
Q Consensus 227 ~tilRPg~l~~~~~~------------~~~~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~-~~~~~~v~~g~-~s~~ 290 (305)
++++||+.+.+.... +..... .++....+++++|+|++++.+++++. . .+++|++++++ .++.
T Consensus 146 ~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~ 224 (299)
T 1n2s_A 146 HLIFRTSWVYAGKGNNFAKTMLRLAKERQTLSV-INDQYGAPTGAELLADCTAHAIRVALNKPEVAGLYHLVAGGTTTWH 224 (299)
T ss_dssp EEEEEECSEECSSSCCHHHHHHHHHHHCSEEEE-ECSCEECCEEHHHHHHHHHHHHHHHHHCGGGCEEEECCCBSCEEHH
T ss_pred eEEEeeeeecCCCcCcHHHHHHHHHhcCCCEEe-ecCcccCCeeHHHHHHHHHHHHHHhccccccCceEEEeCCCCCCHH
Confidence 999999996643211 111212 34455789999999999999998762 2 47899999865 6899
Q ss_pred HHHHHHHHhhhhc
Q 021928 291 DWKKCFSRLMEKT 303 (305)
Q Consensus 291 d~~~~~~~l~~~~ 303 (305)
|+++.+.++.+.+
T Consensus 225 e~~~~i~~~~g~~ 237 (299)
T 1n2s_A 225 DYAALVFDEARKA 237 (299)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCC
Confidence 9999999998865
|
| >2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=4.6e-21 Score=177.07 Aligned_cols=199 Identities=14% Similarity=0.093 Sum_probs=140.4
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchh----hhhc-CCCcEEeecCCCCHHHHHHHhcCccEEEEC
Q 021928 95 PEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA----MESF-GTYVESMAGDASNKKFLKTALRGVRSIICP 169 (305)
Q Consensus 95 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~----~~~~-~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~ 169 (305)
...+|+||||||+|+||++++++|+++|++|++++|+.... .... ..+++++.+|+.+. ++.++|+|||+
T Consensus 24 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~~~~d~vih~ 98 (343)
T 2b69_A 24 EKDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEP-----LYIEVDQIYHL 98 (343)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGTTCTTEEEEECCTTSC-----CCCCCSEEEEC
T ss_pred ccCCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCccchhhhhhhccCCceEEEeCccCCh-----hhcCCCEEEEC
Confidence 44568999999999999999999999999999999975431 1111 24689999999874 47789999998
Q ss_pred Ccc----------------------hHhhhhhhcCCCEEEEEcccccccCCC-------------CcccccchHHHHHHH
Q 021928 170 SEG----------------------FISNAGSLKGVQHVILLSQLSVYRGSG-------------GIQALMKGNARKLAE 214 (305)
Q Consensus 170 ~~g----------------------~~~~~a~~~gv~~~V~iSS~~~~~~~~-------------~~~~~~~~~~~~~~~ 214 (305)
++. .+.+++++.++ +||++||.++|.... ...+... +...|.
T Consensus 99 A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~--Y~~sK~ 175 (343)
T 2b69_A 99 ASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA-RLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRAC--YDEGKR 175 (343)
T ss_dssp CSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTC-EEEEEEEGGGGBSCSSSSBCTTCCCBCCSSSTTHH--HHHHHH
T ss_pred ccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCC-cEEEECcHHHhCCCCCCCCcccccccCCCCCCCCc--hHHHHH
Confidence 431 13445666776 999999998885321 1111111 222344
Q ss_pred HHHHHHH----hCCCCEEEEecCCcccCCCC----------------Ccce-eeecCCCCCCccCHHHHHHHHHHHhhCC
Q 021928 215 QDESMLM----ASGIPYTIIRTGVLQNTPGG----------------KQGF-QFEEGCAANGSLSKEDAAFICVEALESI 273 (305)
Q Consensus 215 ~aE~~l~----~~gi~~tilRPg~l~~~~~~----------------~~~~-~~~~~~~~~~~Is~~DvA~~iv~~l~~~ 273 (305)
.+|.+++ +.+++++++||+.+.+.... +... .++.++....+++++|+|++++.+++.+
T Consensus 176 ~~E~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~ 255 (343)
T 2b69_A 176 VAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSN 255 (343)
T ss_dssp HHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHHHHHHHHHTSS
T ss_pred HHHHHHHHHHHHhCCcEEEEEEcceeCcCCCCCcccHHHHHHHHHHcCCCceEcCCCCeEEeeEeHHHHHHHHHHHHhcC
Confidence 5565543 46999999999996543210 1112 2234445578999999999999999765
Q ss_pred CCCCcEEEEecCC-cCHHHHHHHHHHhhhhc
Q 021928 274 PQTGLIFEVVNGE-EKVSDWKKCFSRLMEKT 303 (305)
Q Consensus 274 ~~~~~~~~v~~g~-~s~~d~~~~~~~l~~~~ 303 (305)
. +++|++++++ .++.|+++.+.++.+.+
T Consensus 256 ~--~~~~~i~~~~~~s~~e~~~~i~~~~g~~ 284 (343)
T 2b69_A 256 V--SSPVNLGNPEEHTILEFAQLIKNLVGSG 284 (343)
T ss_dssp C--CSCEEESCCCEEEHHHHHHHHHHHHTCC
T ss_pred C--CCeEEecCCCCCcHHHHHHHHHHHhCCC
Confidence 3 6789999876 58999999999998764
|
| >3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=9.2e-22 Score=179.36 Aligned_cols=195 Identities=16% Similarity=0.082 Sum_probs=142.3
Q ss_pred EEEEEcCCChHHHHHHHHHHhC--CCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhc--CccEEEECCcc---
Q 021928 100 AVLVTDGDSDIGQMVILSLIVK--RTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--GVRSIICPSEG--- 172 (305)
Q Consensus 100 ~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~--~~d~Vi~~~~g--- 172 (305)
+||||||+|+||++++++|+++ |++|++++|+..... +++++.+|+.|.+++.++++ ++|+|||+++.
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-----~~~~~~~D~~d~~~~~~~~~~~~~d~vih~a~~~~~ 75 (317)
T 3ajr_A 1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDTG-----GIKFITLDVSNRDEIDRAVEKYSIDAIFHLAGILSA 75 (317)
T ss_dssp CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCCT-----TCCEEECCTTCHHHHHHHHHHTTCCEEEECCCCCHH
T ss_pred CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCcccc-----CceEEEecCCCHHHHHHHHhhcCCcEEEECCcccCC
Confidence 5899999999999999999998 899999998764432 47889999999999999998 89999998431
Q ss_pred ------------------hHhhhhhhcCCCEEEEEcccccccCCCC---------cccccchHHHHHHHHHHHHH----H
Q 021928 173 ------------------FISNAGSLKGVQHVILLSQLSVYRGSGG---------IQALMKGNARKLAEQDESML----M 221 (305)
Q Consensus 173 ------------------~~~~~a~~~gv~~~V~iSS~~~~~~~~~---------~~~~~~~~~~~~~~~aE~~l----~ 221 (305)
.+.+++++.++++||++||..+|..... ..+...|.. .|..+|.++ +
T Consensus 76 ~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~p~~~Y~~--sK~~~e~~~~~~~~ 153 (317)
T 3ajr_A 76 KGEKDPALAYKVNMNGTYNILEAAKQHRVEKVVIPSTIGVFGPETPKNKVPSITITRPRTMFGV--TKIAAELLGQYYYE 153 (317)
T ss_dssp HHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCTTSCSSSBCSSSCCCCCSHHHH--HHHHHHHHHHHHHH
T ss_pred ccccChHHHhhhhhHHHHHHHHHHHHcCCCEEEEecCHHHhCCCCCCCCccccccCCCCchHHH--HHHHHHHHHHHHHH
Confidence 1345567789999999999998864311 011122222 233445444 3
Q ss_pred hCCCCEEEEecCCcccC---CCC----------------CcceeeecCCCCCCccCHHHHHHHHHHHhhCCCC---CCcE
Q 021928 222 ASGIPYTIIRTGVLQNT---PGG----------------KQGFQFEEGCAANGSLSKEDAAFICVEALESIPQ---TGLI 279 (305)
Q Consensus 222 ~~gi~~tilRPg~l~~~---~~~----------------~~~~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~~---~~~~ 279 (305)
+.+++++++||+.+.+. +.. +....+..++....+++++|+|++++.+++++.. .+++
T Consensus 154 ~~~~~~~~lR~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~~~~~~g~~ 233 (317)
T 3ajr_A 154 KFGLDVRSLRYPGIISYKAEPTAGTTDYAVEIFYYAVKREKYKCYLAPNRALPMMYMPDALKALVDLYEADRDKLVLRNG 233 (317)
T ss_dssp HHCCEEEEEEECEEECSSSCCCSCSSTHHHHHHHHHHTTCCEEECSCTTCCEEEEEHHHHHHHHHHHHHCCGGGCSSCSC
T ss_pred hcCCeEEEEecCcEeccCCCCCCcchhHHHHHHHHHHhCCCceeecCccceeeeeEHHHHHHHHHHHHhCCccccccCce
Confidence 56999999998775432 110 1111122344556789999999999999987653 3589
Q ss_pred EEEecCCcCHHHHHHHHHHhhh
Q 021928 280 FEVVNGEEKVSDWKKCFSRLME 301 (305)
Q Consensus 280 ~~v~~g~~s~~d~~~~~~~l~~ 301 (305)
|+++++..++.|+++.+.+..+
T Consensus 234 ~~i~~~~~s~~e~~~~i~~~~~ 255 (317)
T 3ajr_A 234 YNVTAYTFTPSELYSKIKERIP 255 (317)
T ss_dssp EECCSEEECHHHHHHHHHTTCC
T ss_pred EecCCccccHHHHHHHHHHHCC
Confidence 9999765689999999988765
|
| >4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.87 E-value=3.1e-21 Score=186.86 Aligned_cols=204 Identities=15% Similarity=0.148 Sum_probs=148.1
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhC---CCeEEEEEcCcchhh---------------------hhcCCCcEEeecCCC
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVK---RTRIKALVKDKRNAM---------------------ESFGTYVESMAGDAS 151 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~---g~~V~~~~R~~~~~~---------------------~~~~~~v~~v~~D~~ 151 (305)
..+|+||||||+|+||++++++|+++ |++|++++|++.... .....+++++.+|++
T Consensus 71 ~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~ 150 (478)
T 4dqv_A 71 PELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARRRLEKTFDSGDPELLRHFKELAADRLEVVAGDKS 150 (478)
T ss_dssp SCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEECCTT
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHHHHHHHHHHHHhcchhhhhhhhhhccCceEEEEeECC
Confidence 45799999999999999999999998 899999999875421 012357999999998
Q ss_pred ------CHHHHHHHhcCccEEEECCcc------------------hHhhhhhhcCCCEEEEEcccccccCCCCc------
Q 021928 152 ------NKKFLKTALRGVRSIICPSEG------------------FISNAGSLKGVQHVILLSQLSVYRGSGGI------ 201 (305)
Q Consensus 152 ------d~~~~~~~~~~~d~Vi~~~~g------------------~~~~~a~~~gv~~~V~iSS~~~~~~~~~~------ 201 (305)
|.+.+.++++++|+|||+++. .+.+++.+.++++||++||.++|......
T Consensus 151 ~~~~gld~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~~V~iSS~~v~~~~~~~~~~E~~ 230 (478)
T 4dqv_A 151 EPDLGLDQPMWRRLAETVDLIVDSAAMVNAFPYHELFGPNVAGTAELIRIALTTKLKPFTYVSTADVGAAIEPSAFTEDA 230 (478)
T ss_dssp SGGGGCCHHHHHHHHHHCCEEEECCSSCSBSSCCEEHHHHHHHHHHHHHHHTSSSCCCEEEEEEGGGGTTSCTTTCCSSS
T ss_pred CcccCCCHHHHHHHHcCCCEEEECccccCCcCHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeehhhcCccCCCCcCCcc
Confidence 778899999999999998431 15566778899999999999887642111
Q ss_pred --ccccc---------hHHHHHHHHHHHHHHh----CCCCEEEEecCCcccCCC-CC----c-------------ceeee
Q 021928 202 --QALMK---------GNARKLAEQDESMLMA----SGIPYTIIRTGVLQNTPG-GK----Q-------------GFQFE 248 (305)
Q Consensus 202 --~~~~~---------~~~~~~~~~aE~~l~~----~gi~~tilRPg~l~~~~~-~~----~-------------~~~~~ 248 (305)
.+... ..+...|..+|.++++ .+++++++|||.+.+... .+ . +....
T Consensus 231 ~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ivRpg~v~G~~~~~g~~~~~~~~~~l~~~~~~~g~~P~ 310 (478)
T 4dqv_A 231 DIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLCALPVAVFRCGMILADTSYAGQLNMSDWVTRMVLSLMATGIAPR 310 (478)
T ss_dssp CHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECCSSSSSCCCTTBHHHHHHHHHHHHCEEES
T ss_pred cccccCcccccccccccchHHHHHHHHHHHHHHHHHhCCCeEEEECceeeCCCccCCcCCHHHHHHHHHHHHHHcCcccc
Confidence 00000 0022234556766654 599999999999764311 00 0 01000
Q ss_pred ----c------CCCCCCccCHHHHHHHHHHHhhC----CCCCCcEEEEecCC---cCHHHHHHHHHHh
Q 021928 249 ----E------GCAANGSLSKEDAAFICVEALES----IPQTGLIFEVVNGE---EKVSDWKKCFSRL 299 (305)
Q Consensus 249 ----~------~~~~~~~Is~~DvA~~iv~~l~~----~~~~~~~~~v~~g~---~s~~d~~~~~~~l 299 (305)
. ++....+++++|+|++++.++.+ +...+++||+++++ .++.|+++.+.++
T Consensus 311 ~~~~~~~~G~~~~~~~~~v~vdDvA~ai~~~~~~~~~~~~~~~~~ynv~~~~~~~~s~~el~~~l~~~ 378 (478)
T 4dqv_A 311 SFYEPDSEGNRQRAHFDGLPVTFVAEAIAVLGARVAGSSLAGFATYHVMNPHDDGIGLDEYVDWLIEA 378 (478)
T ss_dssp CSBCCCTTSCCCCCCCCEEEHHHHHHHHHHHHHTTC-CCCCSEEEEEESCCCCSSCSHHHHHHHHHHT
T ss_pred cccccccccccccceeeeeeHHHHHHHHHHHHhhcccCCCCCCceEEecCCCCCCcCHHHHHHHHHHc
Confidence 0 13345789999999999999986 55668999999865 5789999999885
|
| >1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.87 E-value=6.7e-22 Score=179.38 Aligned_cols=197 Identities=17% Similarity=0.101 Sum_probs=135.4
Q ss_pred EEEEEcCCChHHHHHHHHHHhCC-CeEEEEEcCcchh-hhhcCCCcEEeecCCCCHHHHHHHhcC-----ccEEEECCcc
Q 021928 100 AVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNA-MESFGTYVESMAGDASNKKFLKTALRG-----VRSIICPSEG 172 (305)
Q Consensus 100 ~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~R~~~~~-~~~~~~~v~~v~~D~~d~~~~~~~~~~-----~d~Vi~~~~g 172 (305)
+||||||+|+||++++++|+++| ++|+++.|++... ..... ++. +.+|+.|.+.+.+++++ +|+|||+++.
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~-~~~-~~~d~~~~~~~~~~~~~~~~~~~d~vi~~a~~ 78 (310)
T 1eq2_A 1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLV-DLN-IADYMDKEDFLIQIMAGEEFGDVEAIFHEGAC 78 (310)
T ss_dssp CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGHHHH-TSC-CSEEEEHHHHHHHHHTTCCCSSCCEEEECCSC
T ss_pred CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCchhhhcC-cce-eccccccHHHHHHHHhccccCCCcEEEECccc
Confidence 58999999999999999999999 9999999986542 11111 234 78999999999999986 9999998331
Q ss_pred --------------------hHhhhhhhcCCCEEEEEcccccccCCCCc--------ccccchHHHHHHHHHHHHHHh--
Q 021928 173 --------------------FISNAGSLKGVQHVILLSQLSVYRGSGGI--------QALMKGNARKLAEQDESMLMA-- 222 (305)
Q Consensus 173 --------------------~~~~~a~~~gv~~~V~iSS~~~~~~~~~~--------~~~~~~~~~~~~~~aE~~l~~-- 222 (305)
.+.+++++.++ +||++||.++|...... .+... +...|..+|.+++.
T Consensus 79 ~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v~g~~~~~~~~E~~~~~p~~~--Y~~sK~~~e~~~~~~~ 155 (310)
T 1eq2_A 79 SSTTEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAATYGGRTSDFIESREYEKPLNV--YGYSKFLFDEYVRQIL 155 (310)
T ss_dssp CCTTCCCHHHHHHHTHHHHHHHHHHHHHHTC-CEEEEEEGGGGTTCCSCBCSSGGGCCCSSH--HHHHHHHHHHHHHHHG
T ss_pred ccCcccCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEeeHHHhCCCCCCCCCCCCCCCCCCh--hHHHHHHHHHHHHHHH
Confidence 14456777888 99999999888643220 11111 22234456666643
Q ss_pred --CCCCEEEEecCCcccCCCC------------------Ccce-eeecCCC-CCCccCHHHHHHHHHHHhhCCCCCCcEE
Q 021928 223 --SGIPYTIIRTGVLQNTPGG------------------KQGF-QFEEGCA-ANGSLSKEDAAFICVEALESIPQTGLIF 280 (305)
Q Consensus 223 --~gi~~tilRPg~l~~~~~~------------------~~~~-~~~~~~~-~~~~Is~~DvA~~iv~~l~~~~~~~~~~ 280 (305)
.+++++++||+.+.+.... +... .++.+.. ...+++++|+|++++.+++++. +++|
T Consensus 156 ~~~g~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~v~Dva~~~~~~~~~~~--~~~~ 233 (310)
T 1eq2_A 156 PEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGV--SGIF 233 (310)
T ss_dssp GGCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHHHHHHHHHHHHHCC--CEEE
T ss_pred HHcCCCEEEEeCCcEECcCCCCCCccchHHHHHHHHHHcCCCcEEecCCCcceEccEEHHHHHHHHHHHHhcCC--CCeE
Confidence 5899999999996543211 1111 1233445 6689999999999999998766 7899
Q ss_pred EEecCC-cCHHHHHHHHHHhhhhc
Q 021928 281 EVVNGE-EKVSDWKKCFSRLMEKT 303 (305)
Q Consensus 281 ~v~~g~-~s~~d~~~~~~~l~~~~ 303 (305)
++++++ .++.|+++.+.+..+.+
T Consensus 234 ~i~~~~~~s~~e~~~~i~~~~g~~ 257 (310)
T 1eq2_A 234 NLGTGRAESFQAVADATLAYHKKG 257 (310)
T ss_dssp EESCSCCBCHHHHHHHC-------
T ss_pred EEeCCCccCHHHHHHHHHHHcCCC
Confidence 999865 69999999999887754
|
| >3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} | Back alignment and structure |
|---|
Probab=99.87 E-value=3.7e-22 Score=178.27 Aligned_cols=176 Identities=14% Similarity=0.023 Sum_probs=131.0
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEECCcc-----
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG----- 172 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~g----- 172 (305)
+|+||||||+|+||++++++|+++|++|++++|++.+.. ..+++++.+|++|.+++.++++++|+|||+++.
T Consensus 2 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~---~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a~~~~~~~ 78 (267)
T 3ay3_A 2 LNRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAA---EAHEEIVACDLADAQAVHDLVKDCDGIIHLGGVSVERP 78 (267)
T ss_dssp EEEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCCC---CTTEEECCCCTTCHHHHHHHHTTCSEEEECCSCCSCCC
T ss_pred CceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCcccc---CCCccEEEccCCCHHHHHHHHcCCCEEEECCcCCCCCC
Confidence 479999999999999999999999999999999875432 245799999999999999999999999998431
Q ss_pred -------------hHhhhhhhcCCCEEEEEcccccccCCCCc---------ccccchHHHHHHHHHHHHH----HhCCCC
Q 021928 173 -------------FISNAGSLKGVQHVILLSQLSVYRGSGGI---------QALMKGNARKLAEQDESML----MASGIP 226 (305)
Q Consensus 173 -------------~~~~~a~~~gv~~~V~iSS~~~~~~~~~~---------~~~~~~~~~~~~~~aE~~l----~~~gi~ 226 (305)
.+.+++.+.++++||++||..++...... .+...|.. .|..+|.++ ++.+++
T Consensus 79 ~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~~~~~~~~E~~~~~~~~~Y~~--sK~~~e~~~~~~~~~~gi~ 156 (267)
T 3ay3_A 79 WNDILQANIIGAYNLYEAARNLGKPRIVFASSNHTIGYYPRTTRIDTEVPRRPDSLYGL--SKCFGEDLASLYYHKFDIE 156 (267)
T ss_dssp HHHHHHHTHHHHHHHHHHHHHTTCCEEEEEEEGGGSTTSBTTSCBCTTSCCCCCSHHHH--HHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCHHHhCCCCCCCCCCCCCCCCCCChHHH--HHHHHHHHHHHHHHHcCCC
Confidence 14456677889999999999887542210 11112222 233445544 357999
Q ss_pred EEEEecCCcccCCCCCcceeeecCCCCCCccCHHHHHHHHHHHhhCCCCCCcEEEEecCC
Q 021928 227 YTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVVNGE 286 (305)
Q Consensus 227 ~tilRPg~l~~~~~~~~~~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~~~~~~~~v~~g~ 286 (305)
++++||+.+.+.+. .+.....+++++|+|++++.+++++...+.+|++.++.
T Consensus 157 ~~~lrp~~v~~~~~--------~~~~~~~~~~~~dva~~~~~~~~~~~~~~~~~~~~~~~ 208 (267)
T 3ay3_A 157 TLNIRIGSCFPKPK--------DARMMATWLSVDDFMRLMKRAFVAPKLGCTVVYGASAN 208 (267)
T ss_dssp EEEEEECBCSSSCC--------SHHHHHHBCCHHHHHHHHHHHHHSSCCCEEEEEECCSC
T ss_pred EEEEeceeecCCCC--------CCCeeeccccHHHHHHHHHHHHhCCCCCceeEecCCCc
Confidence 99999999764321 11223568999999999999998876555678877643
|
| >3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A | Back alignment and structure |
|---|
Probab=99.87 E-value=1.7e-21 Score=182.06 Aligned_cols=177 Identities=14% Similarity=0.071 Sum_probs=137.5
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEECCcc-----
Q 021928 99 DAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG----- 172 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~g----- 172 (305)
|+||||||+|+||++++++|+++|+ +|+.++|+ .|.+++.++++++|+|||+++.
T Consensus 1 M~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~-------------------~d~~~l~~~~~~~d~Vih~a~~~~~~~ 61 (369)
T 3st7_A 1 MNIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQ-------------------TKEEELESALLKADFIVHLAGVNRPEH 61 (369)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCCCEEEECCTT-------------------CCHHHHHHHHHHCSEEEECCCSBCTTC
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCEEEEECCC-------------------CCHHHHHHHhccCCEEEECCcCCCCCC
Confidence 6899999999999999999999998 77666554 6889999999999999998431
Q ss_pred -------------hHhhhhhhcCCC-EEEEEcccccccCCCCcccccchHHHHHHHHHHHHHHh----CCCCEEEEecCC
Q 021928 173 -------------FISNAGSLKGVQ-HVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMA----SGIPYTIIRTGV 234 (305)
Q Consensus 173 -------------~~~~~a~~~gv~-~~V~iSS~~~~~~~~~~~~~~~~~~~~~~~~aE~~l~~----~gi~~tilRPg~ 234 (305)
.+.+++++.+++ +||++||..++. ...|. ..|..+|+++++ .+++++++||+.
T Consensus 62 ~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~Ss~~~~~----~~~Y~-----~sK~~~E~~~~~~~~~~g~~~~i~R~~~ 132 (369)
T 3st7_A 62 DKEFSLGNVSYLDHVLDILTRNTKKPAILLSSSIQATQ----DNPYG-----ESKLQGEQLLREYAEEYGNTVYIYRWPN 132 (369)
T ss_dssp STTCSSSCCBHHHHHHHHHTTCSSCCEEEEEEEGGGGS----CSHHH-----HHHHHHHHHHHHHHHHHCCCEEEEEECE
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCchhhcC----CCCch-----HHHHHHHHHHHHHHHHhCCCEEEEECCc
Confidence 156778888888 999999999876 22232 234456666654 799999999998
Q ss_pred cccCCC----------------CCcceeeecCCCCCCccCHHHHHHHHHHHhhCCCCC-CcEEEEecCC-cCHHHHHHHH
Q 021928 235 LQNTPG----------------GKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQT-GLIFEVVNGE-EKVSDWKKCF 296 (305)
Q Consensus 235 l~~~~~----------------~~~~~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~~~-~~~~~v~~g~-~s~~d~~~~~ 296 (305)
+.+... .+....+..++....+++++|+|++++.++.++... +++|++.+++ .++.|+++.+
T Consensus 133 v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~~i~~~~~~s~~e~~~~~ 212 (369)
T 3st7_A 133 LFGKWCKPNYNSVIATFCYKIARNEEIQVNDRNVELTLNYVDDIVAEIKRAIEGTPTIENGVPTVPNVFKVTLGEIVDLL 212 (369)
T ss_dssp EECTTCCTTSSCHHHHHHHHHHTTCCCCCSCTTCEEEEEEHHHHHHHHHHHHHTCCCEETTEECCSCCEEEEHHHHHHHH
T ss_pred eeCCCCCCCcchHHHHHHHHHHcCCCeEecCCCeEEEEEEHHHHHHHHHHHHhCCcccCCceEEeCCCCceeHHHHHHHH
Confidence 654321 122222333455578999999999999999987764 7899999875 5899999999
Q ss_pred HHhhhhc
Q 021928 297 SRLMEKT 303 (305)
Q Consensus 297 ~~l~~~~ 303 (305)
.++.+.+
T Consensus 213 ~~~~g~~ 219 (369)
T 3st7_A 213 YKFKQSR 219 (369)
T ss_dssp HHHHHHH
T ss_pred HHHhCCC
Confidence 9988764
|
| >3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=3.5e-21 Score=172.40 Aligned_cols=176 Identities=11% Similarity=0.056 Sum_probs=133.7
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEECCcc-----
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG----- 172 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~g----- 172 (305)
+|+||||||+|+||++++++|+++|++|++++|++.+.. ..+++++.+|++|.+++.++++++|+|||+++.
T Consensus 3 ~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~---~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~Ag~~~~~~ 79 (267)
T 3rft_A 3 MKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA---GPNEECVQCDLADANAVNAMVAGCDGIVHLGGISVEKP 79 (267)
T ss_dssp EEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC---CTTEEEEECCTTCHHHHHHHHTTCSEEEECCSCCSCCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc---CCCCEEEEcCCCCHHHHHHHHcCCCEEEECCCCcCcCC
Confidence 478999999999999999999999999999999976543 457899999999999999999999999998431
Q ss_pred -------------hHhhhhhhcCCCEEEEEcccccccCCC---------CcccccchHHHHHHHHHHHHH----HhCCCC
Q 021928 173 -------------FISNAGSLKGVQHVILLSQLSVYRGSG---------GIQALMKGNARKLAEQDESML----MASGIP 226 (305)
Q Consensus 173 -------------~~~~~a~~~gv~~~V~iSS~~~~~~~~---------~~~~~~~~~~~~~~~~aE~~l----~~~gi~ 226 (305)
.+.+++++.++++||++||..++.... +..+...|... |...|.++ ++.+++
T Consensus 80 ~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~g~~~~~~~~~e~~~~~~~~~Y~~s--K~~~e~~~~~~a~~~g~~ 157 (267)
T 3rft_A 80 FEQILQGNIIGLYNLYEAARAHGQPRIVFASSNHTIGYYPQTERLGPDVPARPDGLYGVS--KCFGENLARMYFDKFGQE 157 (267)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGTTSBTTSCBCTTSCCCCCSHHHHH--HHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcchHHhCCCCCCCCCCCCCCCCCCChHHHH--HHHHHHHHHHHHHHhCCe
Confidence 145567788999999999998874211 11111222222 32344433 367999
Q ss_pred EEEEecCCcccCCCCCcceeeecCCCCCCccCHHHHHHHHHHHhhCCCCCCcEEEEecCC
Q 021928 227 YTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVVNGE 286 (305)
Q Consensus 227 ~tilRPg~l~~~~~~~~~~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~~~~~~~~v~~g~ 286 (305)
+++|||+.+.+.... +.....+++++|+++.+..+++.+...+.++++.+++
T Consensus 158 ~~~vr~~~v~~~~~~--------~~~~~~~~~~~d~a~~~~~~~~~~~~~~~~~~~~s~~ 209 (267)
T 3rft_A 158 TALVRIGSCTPEPNN--------YRMLSTWFSHDDFVSLIEAVFRAPVLGCPVVWGASAN 209 (267)
T ss_dssp EEEEEECBCSSSCCS--------TTHHHHBCCHHHHHHHHHHHHHCSCCCSCEEEECCCC
T ss_pred EEEEEeecccCCCCC--------CCceeeEEcHHHHHHHHHHHHhCCCCCceEEEEeCCC
Confidence 999999997755332 2233568999999999999999877666777777653
|
| >2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.87 E-value=2.8e-21 Score=178.17 Aligned_cols=206 Identities=12% Similarity=0.041 Sum_probs=144.4
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCC-------CeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHh-cCccEEE
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKR-------TRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTAL-RGVRSII 167 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g-------~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~-~~~d~Vi 167 (305)
.++|+||||||+||||++++++|+++| ++|++++|++.........+++++.+|+.|.+++.+++ .++|+||
T Consensus 12 ~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~d~vi 91 (342)
T 2hrz_A 12 FQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPAGFSGAVDARAADLSAPGEAEKLVEARPDVIF 91 (342)
T ss_dssp CSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCTTCCSEEEEEECCTTSTTHHHHHHHTCCSEEE
T ss_pred ccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCccccccCCceeEEEcCCCCHHHHHHHHhcCCCEEE
Confidence 356899999999999999999999999 89999999875433223456889999999999999999 4899999
Q ss_pred ECCcc---------------------hHhhhhhhcC-----CCEEEEEcccccccCCCC--------cccccchHHHHHH
Q 021928 168 CPSEG---------------------FISNAGSLKG-----VQHVILLSQLSVYRGSGG--------IQALMKGNARKLA 213 (305)
Q Consensus 168 ~~~~g---------------------~~~~~a~~~g-----v~~~V~iSS~~~~~~~~~--------~~~~~~~~~~~~~ 213 (305)
|+++. .+.+++.+.+ +++||++||..+|..... ..+...|. ..|
T Consensus 92 h~A~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~E~~~~~~~~~Y~--~sK 169 (342)
T 2hrz_A 92 HLAAIVSGEAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVFGAPLPYPIPDEFHTTPLTSYG--TQK 169 (342)
T ss_dssp ECCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGCCSSCCSSBCTTCCCCCSSHHH--HHH
T ss_pred ECCccCcccccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHhhCCCCCCCcCCCCCCCCcchHH--HHH
Confidence 98431 0334455554 899999999988864311 00111222 234
Q ss_pred HHHHHHHHh----CCCCEEEEecCCcccCCCC------------------Ccceeee-cCCCCCCccCHHHHHHHHHHHh
Q 021928 214 EQDESMLMA----SGIPYTIIRTGVLQNTPGG------------------KQGFQFE-EGCAANGSLSKEDAAFICVEAL 270 (305)
Q Consensus 214 ~~aE~~l~~----~gi~~tilRPg~l~~~~~~------------------~~~~~~~-~~~~~~~~Is~~DvA~~iv~~l 270 (305)
..+|.++++ .+++++++|+..+...++. +....+. .+.....+++++|+|++++.++
T Consensus 170 ~~~e~~~~~~~~~~~~~~~~ir~~~v~g~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Dva~~~~~~~ 249 (342)
T 2hrz_A 170 AICELLLSDYSRRGFFDGIGIRLPTICIRPGKPNAAASGFFSNILREPLVGQEAVLPVPESIRHWHASPRSAVGFLIHGA 249 (342)
T ss_dssp HHHHHHHHHHHHTTSCEEEEEEECEETTCCSSCCCSGGGHHHHHHHHHHTTCCEEECSCTTCEEEEECHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCceeEEeeeEEecCCCCcchhHHHHHHHHHHHhcCCCeeccCCCccceeeEehHHHHHHHHHHH
Confidence 445555543 4789999998775432211 1111111 1122345789999999999999
Q ss_pred hCCCC---CCcEEEEecCCcCHHHHHHHHHHhhhhc
Q 021928 271 ESIPQ---TGLIFEVVNGEEKVSDWKKCFSRLMEKT 303 (305)
Q Consensus 271 ~~~~~---~~~~~~v~~g~~s~~d~~~~~~~l~~~~ 303 (305)
+.+.. .+++||+++.+.++.|+++.+.++.+.+
T Consensus 250 ~~~~~~~~~~~~~ni~g~~~s~~e~~~~i~~~~g~~ 285 (342)
T 2hrz_A 250 MIDVEKVGPRRNLSMPGLSATVGEQIEALRKVAGEK 285 (342)
T ss_dssp HSCHHHHCSCCEEECCCEEEEHHHHHHHHHHHHCHH
T ss_pred hccccccCCccEEEcCCCCCCHHHHHHHHHHHcCcc
Confidence 87643 5689999754568999999999987753
|
| >1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=8.4e-21 Score=174.66 Aligned_cols=203 Identities=19% Similarity=0.170 Sum_probs=140.4
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcch----hh---hhcCCCcEEeecCCCCHHHHHHHhc--CccEEEEC
Q 021928 99 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN----AM---ESFGTYVESMAGDASNKKFLKTALR--GVRSIICP 169 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~----~~---~~~~~~v~~v~~D~~d~~~~~~~~~--~~d~Vi~~ 169 (305)
|+||||||+|+||++++++|+++|++|+++.|.... .. ...+.+++++.+|++|.+++.++++ ++|+|||+
T Consensus 1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~D~vih~ 80 (338)
T 1udb_A 1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIHF 80 (338)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHTTCSEEEEC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhhcCCcceEEEccCCCHHHHHHHhhccCCCEEEEC
Confidence 589999999999999999999999999999875322 11 1123468899999999999999887 48999998
Q ss_pred Ccc----------------------hHhhhhhhcCCCEEEEEcccccccCCC--------Cccc-ccchHHHHHHHHHHH
Q 021928 170 SEG----------------------FISNAGSLKGVQHVILLSQLSVYRGSG--------GIQA-LMKGNARKLAEQDES 218 (305)
Q Consensus 170 ~~g----------------------~~~~~a~~~gv~~~V~iSS~~~~~~~~--------~~~~-~~~~~~~~~~~~aE~ 218 (305)
++. .+.+++++.++++||++||..+|.... ...+ ...|. ..|..+|.
T Consensus 81 A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~e~~~~~~~~~~Y~--~sK~~~e~ 158 (338)
T 1udb_A 81 AGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVYGDNPKIPYVESFPTGTPQSPYG--KSKLMVEQ 158 (338)
T ss_dssp CSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCCSSSBCTTSCCCCCSSHHH--HHHHHHHH
T ss_pred CccCccccchhcHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccHHHhCCCCCCCcCcccCCCCCCChHH--HHHHHHHH
Confidence 431 033456677899999999998875321 1101 11222 23444565
Q ss_pred HHHh----C-CCCEEEEecCCcccC-C--------C----------------CCcceee-e------cCCCCCCccCHHH
Q 021928 219 MLMA----S-GIPYTIIRTGVLQNT-P--------G----------------GKQGFQF-E------EGCAANGSLSKED 261 (305)
Q Consensus 219 ~l~~----~-gi~~tilRPg~l~~~-~--------~----------------~~~~~~~-~------~~~~~~~~Is~~D 261 (305)
+++. . +++++++||+.+.+. + . ....+.. + .+.....+|+++|
T Consensus 159 ~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~D 238 (338)
T 1udb_A 159 ILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMD 238 (338)
T ss_dssp HHHHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEECEEEHHH
T ss_pred HHHHHHHhcCCCceEEEeeceecCCCcccccccccccchhhHHHHHHHHHHhcCCCcEEecCcccCCCCceeeeeEEHHH
Confidence 5443 3 799999998764321 1 0 0111111 1 1223357899999
Q ss_pred HHHHHHHHhhCCC--CCCcEEEEecCC-cCHHHHHHHHHHhhhhc
Q 021928 262 AAFICVEALESIP--QTGLIFEVVNGE-EKVSDWKKCFSRLMEKT 303 (305)
Q Consensus 262 vA~~iv~~l~~~~--~~~~~~~v~~g~-~s~~d~~~~~~~l~~~~ 303 (305)
+|++++.+++++. ..+++||+++++ .++.|+++.+.++.+.+
T Consensus 239 va~a~~~~l~~~~~~~~~~~yni~~~~~~s~~e~~~~i~~~~g~~ 283 (338)
T 1udb_A 239 LADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGKP 283 (338)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTSC
T ss_pred HHHHHHHHHhhhhccCCCcEEEecCCCceeHHHHHHHHHHHhCCC
Confidence 9999999997532 223799999765 58999999999988754
|
| >2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=1.4e-20 Score=173.06 Aligned_cols=202 Identities=8% Similarity=-0.083 Sum_probs=144.3
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhh----hhc--CCCcEEeecCCCCHHHHHHHhcC--ccEEEEC
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM----ESF--GTYVESMAGDASNKKFLKTALRG--VRSIICP 169 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~----~~~--~~~v~~v~~D~~d~~~~~~~~~~--~d~Vi~~ 169 (305)
+|+||||||+|+||++++++|+++|++|++++|+++... +.. ..+++++.+|+.|.+++.+++++ +|+|||+
T Consensus 3 ~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~ 82 (345)
T 2z1m_A 3 GKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFASWRLKELGIENDVKIIHMDLLEFSNIIRTIEKVQPDEVYNL 82 (345)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTTHHHHHTTCTTTEEECCCCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccccccHhhccccCceeEEECCCCCHHHHHHHHHhcCCCEEEEC
Confidence 489999999999999999999999999999999875421 111 23689999999999999999986 5999998
Q ss_pred Ccc----------------------hHhhhhhhcCC-CEEEEEcccccccCCC--------CcccccchHHHHHHHHHHH
Q 021928 170 SEG----------------------FISNAGSLKGV-QHVILLSQLSVYRGSG--------GIQALMKGNARKLAEQDES 218 (305)
Q Consensus 170 ~~g----------------------~~~~~a~~~gv-~~~V~iSS~~~~~~~~--------~~~~~~~~~~~~~~~~aE~ 218 (305)
++. .+.+++.+.++ ++||++||..+|.... +..+...|. ..|..+|.
T Consensus 83 A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~e~~~~~~~~~Y~--~sK~~~e~ 160 (345)
T 2z1m_A 83 AAQSFVGVSFEQPILTAEVDAIGVLRILEALRTVKPDTKFYQASTSEMFGKVQEIPQTEKTPFYPRSPYA--VAKLFGHW 160 (345)
T ss_dssp CCCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHH--HHHHHHHH
T ss_pred CCCcchhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEechhhcCCCCCCCCCccCCCCCCChhH--HHHHHHHH
Confidence 431 03345666777 8999999998875321 111112222 23444555
Q ss_pred HHH----hCCCCEEEEecCCcc-cCCC----------------CC-c-ceeeecCCCCCCccCHHHHHHHHHHHhhCCCC
Q 021928 219 MLM----ASGIPYTIIRTGVLQ-NTPG----------------GK-Q-GFQFEEGCAANGSLSKEDAAFICVEALESIPQ 275 (305)
Q Consensus 219 ~l~----~~gi~~tilRPg~l~-~~~~----------------~~-~-~~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~~ 275 (305)
+++ +.+++++++|+.... ++.. .+ . ...++.++....+++++|+|++++.+++++.
T Consensus 161 ~~~~~~~~~~~~~~~~r~~~~~gpg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Dva~a~~~~~~~~~- 239 (345)
T 2z1m_A 161 ITVNYREAYNMFACSGILFNHESPLRGIEFVTRKITYSLARIKYGLQDKLVLGNLNAKRDWGYAPEYVEAMWLMMQQPE- 239 (345)
T ss_dssp HHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEECCEEHHHHHHHHHHHHTSSS-
T ss_pred HHHHHHHHhCCceEeeeeeeecCCCCCCcchhHHHHHHHHHHHcCCCCeeeeCCCCceeeeEEHHHHHHHHHHHHhCCC-
Confidence 544 358999998876532 2111 01 1 1123334445679999999999999998654
Q ss_pred CCcEEEEecCC-cCHHHHHHHHHHhhhhc
Q 021928 276 TGLIFEVVNGE-EKVSDWKKCFSRLMEKT 303 (305)
Q Consensus 276 ~~~~~~v~~g~-~s~~d~~~~~~~l~~~~ 303 (305)
+++|++++++ .++.|+++.+.+..+.+
T Consensus 240 -~~~~~i~~~~~~s~~e~~~~i~~~~g~~ 267 (345)
T 2z1m_A 240 -PDDYVIATGETHTVREFVEKAAKIAGFD 267 (345)
T ss_dssp -CCCEEECCSCCEEHHHHHHHHHHHTTCC
T ss_pred -CceEEEeCCCCccHHHHHHHHHHHhCCC
Confidence 3789999875 58999999999998764
|
| >1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.86 E-value=1e-20 Score=176.20 Aligned_cols=202 Identities=11% Similarity=-0.019 Sum_probs=142.6
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchh-----hhhc------CCCcEEeecCCCCHHHHHHHhcC--cc
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-----MESF------GTYVESMAGDASNKKFLKTALRG--VR 164 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~-----~~~~------~~~v~~v~~D~~d~~~~~~~~~~--~d 164 (305)
||+||||||+|+||++++++|+++|++|++++|++... .... +.+++++.+|++|.+++.+++++ +|
T Consensus 1 m~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 80 (372)
T 1db3_A 1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPD 80 (372)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCCS
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHhcCCC
Confidence 48999999999999999999999999999999986531 1111 24688999999999999999986 69
Q ss_pred EEEECCcc----------------------hHhhhhhhcCC---CEEEEEcccccccCCCC--------cccccchHHHH
Q 021928 165 SIICPSEG----------------------FISNAGSLKGV---QHVILLSQLSVYRGSGG--------IQALMKGNARK 211 (305)
Q Consensus 165 ~Vi~~~~g----------------------~~~~~a~~~gv---~~~V~iSS~~~~~~~~~--------~~~~~~~~~~~ 211 (305)
+|||+++. .+.+++.+.++ ++||++||..+|..... ..+...|. .
T Consensus 81 ~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~SS~~v~g~~~~~~~~E~~~~~~~~~Y~--~ 158 (372)
T 1db3_A 81 EVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYA--V 158 (372)
T ss_dssp EEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCSSSBCTTSCCCCCSHHH--H
T ss_pred EEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCChhhhCCCCCCCCCccCCCCCCChHH--H
Confidence 99998331 03445666777 89999999988764221 11122222 2
Q ss_pred HHHHHHHHHH----hCCCCEEEEecCCcccCC-C----------------CCc--ceeeecCCCCCCccCHHHHHHHHHH
Q 021928 212 LAEQDESMLM----ASGIPYTIIRTGVLQNTP-G----------------GKQ--GFQFEEGCAANGSLSKEDAAFICVE 268 (305)
Q Consensus 212 ~~~~aE~~l~----~~gi~~tilRPg~l~~~~-~----------------~~~--~~~~~~~~~~~~~Is~~DvA~~iv~ 268 (305)
.|..+|.+++ +.+++++++||..+.+.. . .+. ...++.++....+++++|+|++++.
T Consensus 159 sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~Dva~a~~~ 238 (372)
T 1db3_A 159 AKLYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQWM 238 (372)
T ss_dssp HHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCeEEEEECCccCCCCCCcchhhHHHHHHHHHHcCCCCceeecCCCceeeeeEHHHHHHHHHH
Confidence 3444555544 358999999987643211 1 011 1223444556789999999999999
Q ss_pred HhhCCCCCCcEEEEecCC-cCHHHHHHHHHHhhhhc
Q 021928 269 ALESIPQTGLIFEVVNGE-EKVSDWKKCFSRLMEKT 303 (305)
Q Consensus 269 ~l~~~~~~~~~~~v~~g~-~s~~d~~~~~~~l~~~~ 303 (305)
+++++. +++||+++++ .++.|+++.+.+..+.+
T Consensus 239 ~~~~~~--~~~~ni~~~~~~s~~e~~~~i~~~~g~~ 272 (372)
T 1db3_A 239 MLQQEQ--PEDFVIATGVQYSVRQFVEMAAAQLGIK 272 (372)
T ss_dssp TTSSSS--CCCEEECCCCCEEHHHHHHHHHHTTTEE
T ss_pred HHhcCC--CceEEEcCCCceeHHHHHHHHHHHhCCC
Confidence 998654 4789999876 68999999999988753
|
| >2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=6.7e-21 Score=176.77 Aligned_cols=200 Identities=13% Similarity=0.089 Sum_probs=144.3
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCC-----CeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcC---ccEEEECC
Q 021928 99 DAVLVTDGDSDIGQMVILSLIVKR-----TRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRG---VRSIICPS 170 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~~~g-----~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~---~d~Vi~~~ 170 (305)
|+||||||+|+||++++++|+++| ++|++++|++.... ....+++++.+|+.|.+++.+++++ +|+|||++
T Consensus 2 ~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~vih~a 80 (364)
T 2v6g_A 2 SVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW-HEDNPINYVQCDISDPDDSQAKLSPLTDVTHVFYVT 80 (364)
T ss_dssp EEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC-CCSSCCEEEECCTTSHHHHHHHHTTCTTCCEEEECC
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc-cccCceEEEEeecCCHHHHHHHHhcCCCCCEEEECC
Confidence 789999999999999999999999 99999999876543 2234689999999999999999998 99999984
Q ss_pred cc-----------------hHhhhhhhc--CCCEEE-------EEcccccccCCC----Cccc---cc--chHHHHHHHH
Q 021928 171 EG-----------------FISNAGSLK--GVQHVI-------LLSQLSVYRGSG----GIQA---LM--KGNARKLAEQ 215 (305)
Q Consensus 171 ~g-----------------~~~~~a~~~--gv~~~V-------~iSS~~~~~~~~----~~~~---~~--~~~~~~~~~~ 215 (305)
+. .+.+++++. ++++|| |+||.++|.... .... .. .... ..
T Consensus 81 ~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~~g~~i~~Ss~~vyg~~~~~~~~~~E~~~~~~~~~~y----~~ 156 (364)
T 2v6g_A 81 WANRSTEQENCEANSKMFRNVLDAVIPNCPNLKHISLQTGRKHYMGPFESYGKIESHDPPYTEDLPRLKYMNFY----YD 156 (364)
T ss_dssp CCCCSSHHHHHHHHHHHHHHHHHHHTTTCTTCCEEEEECCTHHHHCCGGGTTTSCCCCSSBCTTSCCCSSCCHH----HH
T ss_pred CCCcchHHHHHHHhHHHHHHHHHHHHHhccccceEEeccCceEEEechhhccccccCCCCCCccccCCccchhh----HH
Confidence 31 145566766 899998 789988875421 1000 00 0011 12
Q ss_pred HHHHHH----hCC-CCEEEEecCCcccCCCCC--c---------------c--ee-eecC---CCCCCccCHHHHHHHHH
Q 021928 216 DESMLM----ASG-IPYTIIRTGVLQNTPGGK--Q---------------G--FQ-FEEG---CAANGSLSKEDAAFICV 267 (305)
Q Consensus 216 aE~~l~----~~g-i~~tilRPg~l~~~~~~~--~---------------~--~~-~~~~---~~~~~~Is~~DvA~~iv 267 (305)
+|++++ +.+ ++++++||+.+++..... . + .. ++.+ ......++++|+|++++
T Consensus 157 ~E~~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~v~Dva~a~~ 236 (364)
T 2v6g_A 157 LEDIMLEEVEKKEGLTWSVHRPGNIFGFSPYSMMNLVGTLCVYAAICKHEGKVLRFTGCKAAWDGYSDCSDADLIAEHHI 236 (364)
T ss_dssp HHHHHHHHHTTSTTCEEEEEEESSEECCCTTCSSCHHHHHHHHHHHHHHHTCCBCCCSCHHHHHSCBCCEEHHHHHHHHH
T ss_pred HHHHHHHHhhcCCCceEEEECCCceeCCCCCcccchHHHHHHHHHHHHhcCCceecCCCcccccccCCCCcHHHHHHHHH
Confidence 444443 356 999999999966432111 1 0 01 1111 11245667799999999
Q ss_pred HHhhCCCCCCcEEEEecCC-cCHHHHHHHHHHhhhhc
Q 021928 268 EALESIPQTGLIFEVVNGE-EKVSDWKKCFSRLMEKT 303 (305)
Q Consensus 268 ~~l~~~~~~~~~~~v~~g~-~s~~d~~~~~~~l~~~~ 303 (305)
.+++++...+++||+++++ .++.|+++.+.+..+.+
T Consensus 237 ~~~~~~~~~g~~~ni~~~~~~s~~e~~~~i~~~~g~~ 273 (364)
T 2v6g_A 237 WAAVDPYAKNEAFNVSNGDVFKWKHFWKVLAEQFGVE 273 (364)
T ss_dssp HHHHCGGGTTEEEEECCSCCBCHHHHHHHHHHHHTCC
T ss_pred HHHhCCCCCCceEEecCCCcCCHHHHHHHHHHHhCCC
Confidence 9998876678899999875 69999999999998864
|
| >2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} | Back alignment and structure |
|---|
Probab=99.86 E-value=2.1e-21 Score=177.15 Aligned_cols=200 Identities=16% Similarity=0.127 Sum_probs=133.1
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEc-Ccch---hh--hhcC---CCcEEeecCCCCHHHHHHHhcCccEEEE
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVK-DKRN---AM--ESFG---TYVESMAGDASNKKFLKTALRGVRSIIC 168 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R-~~~~---~~--~~~~---~~v~~v~~D~~d~~~~~~~~~~~d~Vi~ 168 (305)
+|+||||||+||||++++++|+++|++|++++| +++. .. ..+. .+++++.+|++|.+++.++++++|+|||
T Consensus 1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih 80 (322)
T 2p4h_X 1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFLTNLPGASEKLHFFNADLSNPDSFAAAIEGCVGIFH 80 (322)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCCHHHHTSTTHHHHEEECCCCTTCGGGGHHHHTTCSEEEE
T ss_pred CCEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHHHHHHhhhccCCceEEEecCCCCHHHHHHHHcCCCEEEE
Confidence 378999999999999999999999999999998 6532 11 1111 2478899999999999999999999999
Q ss_pred CCcc-----------h----------Hhhhhhhc-CCCEEEEEcccccccCCCCc------------------cccc-ch
Q 021928 169 PSEG-----------F----------ISNAGSLK-GVQHVILLSQLSVYRGSGGI------------------QALM-KG 207 (305)
Q Consensus 169 ~~~g-----------~----------~~~~a~~~-gv~~~V~iSS~~~~~~~~~~------------------~~~~-~~ 207 (305)
+++. . +.+++.+. ++++||++||..++...... .+.. .|
T Consensus 81 ~A~~~~~~~~~~~~~~~~~nv~gt~~l~~aa~~~~~~~~iV~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~p~~~~Y 160 (322)
T 2p4h_X 81 TASPIDFAVSEPEEIVTKRTVDGALGILKACVNSKTVKRFIYTSSGSAVSFNGKDKDVLDESDWSDVDLLRSVKPFGWNY 160 (322)
T ss_dssp CCCCC--------CHHHHHHHHHHHHHHHHHTTCSSCCEEEEEEEGGGTSCSSSCCSEECTTCCCCHHHHHHHCCTTHHH
T ss_pred cCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccHHHcccCCCCCeecCCccccchhhhcccCcccccH
Confidence 8421 0 23345555 78999999998754211100 0000 12
Q ss_pred HHHHHHHHHHHHH----HhCCCCEEEEecCCcccCCCCCc--c-e------eee----cCCCCCCccCHHHHHHHHHHHh
Q 021928 208 NARKLAEQDESML----MASGIPYTIIRTGVLQNTPGGKQ--G-F------QFE----EGCAANGSLSKEDAAFICVEAL 270 (305)
Q Consensus 208 ~~~~~~~~aE~~l----~~~gi~~tilRPg~l~~~~~~~~--~-~------~~~----~~~~~~~~Is~~DvA~~iv~~l 270 (305)
.. .|..+|.++ ++.+++++++||+.+.+...... . . ..+ .+.....+++++|+|++++.++
T Consensus 161 ~~--sK~~~e~~~~~~~~~~gi~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~v~Dva~a~~~~~ 238 (322)
T 2p4h_X 161 AV--SKTLAEKAVLEFGEQNGIDVVTLILPFIVGRFVCPKLPDSIEKALVLVLGKKEQIGVTRFHMVHVDDVARAHIYLL 238 (322)
T ss_dssp HH--HHHHHHHHHHHHHHHTTCCEEEEEECEEESCCCSSSCCHHHHHHTHHHHSCGGGCCEEEEEEEEHHHHHHHHHHHH
T ss_pred HH--HHHHHHHHHHHHHHhcCCcEEEEcCCceECCCCCCCCCchHHHHHHHHhCCCccCcCCCcCEEEHHHHHHHHHHHh
Confidence 22 233344443 34799999999999654321110 0 0 000 0111125899999999999999
Q ss_pred hCCCCCCcEEEEecCCcCHHHHHHHHHHhh
Q 021928 271 ESIPQTGLIFEVVNGEEKVSDWKKCFSRLM 300 (305)
Q Consensus 271 ~~~~~~~~~~~v~~g~~s~~d~~~~~~~l~ 300 (305)
+++...++ |++++.+.++.|+++.+.+..
T Consensus 239 ~~~~~~g~-~~~~~~~~s~~e~~~~i~~~~ 267 (322)
T 2p4h_X 239 ENSVPGGR-YNCSPFIVPIEEMSQLLSAKY 267 (322)
T ss_dssp HSCCCCEE-EECCCEEEEHHHHHHHHHHHC
T ss_pred hCcCCCCC-EEEcCCCCCHHHHHHHHHHhC
Confidence 87654454 885544568999999988765
|
| >1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1 | Back alignment and structure |
|---|
Probab=99.86 E-value=8.3e-21 Score=190.70 Aligned_cols=206 Identities=13% Similarity=0.075 Sum_probs=149.6
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhC-CCeEEEEEcCcchhhhhc-CCCcEEeecCCCCHHH-HHHHhcCccEEEECCc--
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVK-RTRIKALVKDKRNAMESF-GTYVESMAGDASNKKF-LKTALRGVRSIICPSE-- 171 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~R~~~~~~~~~-~~~v~~v~~D~~d~~~-~~~~~~~~d~Vi~~~~-- 171 (305)
++|+||||||+|+||++++++|+++ |++|++++|++....... ..+++++.+|++|.++ +.++++++|+|||+++
T Consensus 314 ~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~D~Vih~Aa~~ 393 (660)
T 1z7e_A 314 RRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLVAIA 393 (660)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGGGTTCTTEEEEECCTTTCHHHHHHHHHHCSEEEECCCCC
T ss_pred cCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhhhccCCceEEEECCCCCcHHHHHHhhcCCCEEEECceec
Confidence 4689999999999999999999998 899999999876644332 3478999999998654 7788999999999732
Q ss_pred c--------------------hHhhhhhhcCCCEEEEEcccccccCCCCcc-----------cc-cc-hHHHHHHHHHHH
Q 021928 172 G--------------------FISNAGSLKGVQHVILLSQLSVYRGSGGIQ-----------AL-MK-GNARKLAEQDES 218 (305)
Q Consensus 172 g--------------------~~~~~a~~~gv~~~V~iSS~~~~~~~~~~~-----------~~-~~-~~~~~~~~~aE~ 218 (305)
. .+.+++.+.+ ++||++||.++|....... +. .+ ..+...|..+|.
T Consensus 394 ~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~-~r~V~~SS~~vyg~~~~~~~~E~~~~~~~~p~~~p~~~Y~~sK~~~E~ 472 (660)
T 1z7e_A 394 TPIEYTRNPLRVFELDFEENLRIIRYCVKYR-KRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDR 472 (660)
T ss_dssp CTHHHHHSHHHHHHHHTHHHHHHHHHHHHTT-CEEEEECCGGGGBTCCSSSBCTTTCCEEECCTTCTTHHHHHHHHHHHH
T ss_pred CccccccCHHHHHHhhhHHHHHHHHHHHHhC-CEEEEEecHHHcCCCCCcccCCCccccccCcccCCCCCcHHHHHHHHH
Confidence 1 1345566677 9999999998885422110 00 00 012223455666
Q ss_pred HHH----hCCCCEEEEecCCcccCCCC----------------------Ccce-eeecCCCCCCccCHHHHHHHHHHHhh
Q 021928 219 MLM----ASGIPYTIIRTGVLQNTPGG----------------------KQGF-QFEEGCAANGSLSKEDAAFICVEALE 271 (305)
Q Consensus 219 ~l~----~~gi~~tilRPg~l~~~~~~----------------------~~~~-~~~~~~~~~~~Is~~DvA~~iv~~l~ 271 (305)
+++ +.+++++++||+.+.+.... +... .++.++....+++++|+|++++.+++
T Consensus 473 ~~~~~~~~~gi~~~ilRpg~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~ai~~~l~ 552 (660)
T 1z7e_A 473 VIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRIIE 552 (660)
T ss_dssp HHHHHHHHHCCCEEEEEECSEESTTSSCHHHHTTTCSCHHHHHHHHHHHTCCEEEEGGGCCEEECEEHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEECCCcccCCCccccccccccccchHHHHHHHHHcCCCcEEeCCCCeEEEEEEHHHHHHHHHHHHh
Confidence 653 46999999999996543210 1111 12234455679999999999999998
Q ss_pred CCC--CCCcEEEEecCC--cCHHHHHHHHHHhhhhc
Q 021928 272 SIP--QTGLIFEVVNGE--EKVSDWKKCFSRLMEKT 303 (305)
Q Consensus 272 ~~~--~~~~~~~v~~g~--~s~~d~~~~~~~l~~~~ 303 (305)
++. ..+++|++++++ .++.|+++.+.++.+.+
T Consensus 553 ~~~~~~~g~~~ni~~~~~~~s~~el~~~i~~~~g~~ 588 (660)
T 1z7e_A 553 NAGNRCDGEIINIGNPENEASIEELGEMLLASFEKH 588 (660)
T ss_dssp CGGGTTTTEEEEECCGGGEEEHHHHHHHHHHHHHHC
T ss_pred CccccCCCeEEEECCCCCCcCHHHHHHHHHHHhcCC
Confidence 765 467899999874 68999999999988764
|
| >2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.86 E-value=8.4e-22 Score=169.65 Aligned_cols=175 Identities=14% Similarity=0.070 Sum_probs=132.5
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCC--eEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEECCcc--
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRT--RIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG-- 172 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~g-- 172 (305)
++|+|+||||+|+||++++++|+++|+ +|++++|++.+ ...+++++.+|+.|.+++.+++ +|+|||+++.
T Consensus 4 ~~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~----~~~~~~~~~~D~~~~~~~~~~~--~d~vi~~a~~~~ 77 (215)
T 2a35_A 4 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA----EHPRLDNPVGPLAELLPQLDGS--IDTAFCCLGTTI 77 (215)
T ss_dssp CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC----CCTTEECCBSCHHHHGGGCCSC--CSEEEECCCCCH
T ss_pred CCceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc----cCCCceEEeccccCHHHHHHhh--hcEEEECeeecc
Confidence 458999999999999999999999998 99999998765 2346889999999988888888 9999998431
Q ss_pred ------------------hHhhhhhhcCCCEEEEEcccccccCCCCcccccchHHHHHHHHHHHHHHhCCCC-EEEEecC
Q 021928 173 ------------------FISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMASGIP-YTIIRTG 233 (305)
Q Consensus 173 ------------------~~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~~~~~~aE~~l~~~gi~-~tilRPg 233 (305)
.+.+++++.++++||++||.+++..+. ..| ...|..+|.++++.+++ ++++||+
T Consensus 78 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~--~~y-----~~sK~~~e~~~~~~~~~~~~~vrp~ 150 (215)
T 2a35_A 78 KEAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADAKSS--IFY-----NRVKGELEQALQEQGWPQLTIARPS 150 (215)
T ss_dssp HHHSSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTTCS--SHH-----HHHHHHHHHHHTTSCCSEEEEEECC
T ss_pred ccCCCHHHHHHhhHHHHHHHHHHHHHcCCCEEEEECCcccCCCCc--cHH-----HHHHHHHHHHHHHcCCCeEEEEeCc
Confidence 134556778999999999998875422 223 22456788999999999 9999999
Q ss_pred CcccCCCCC---cce---eeecCCCCCCccCHHHHHHHHHHHhhCCCCCCcEEEEecCC
Q 021928 234 VLQNTPGGK---QGF---QFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVVNGE 286 (305)
Q Consensus 234 ~l~~~~~~~---~~~---~~~~~~~~~~~Is~~DvA~~iv~~l~~~~~~~~~~~v~~g~ 286 (305)
.+.+..... ..+ .....+....+++++|+|++++.+++++. +..|++++++
T Consensus 151 ~v~g~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~--~~~~~i~~~~ 207 (215)
T 2a35_A 151 LLFGPREEFRLAEILAAPIARILPGKYHGIEACDLARALWRLALEEG--KGVRFVESDE 207 (215)
T ss_dssp SEESTTSCEEGGGGTTCCCC----CHHHHHHHHHHHHHHHHHHTCCC--SEEEEEEHHH
T ss_pred eeeCCCCcchHHHHHHHhhhhccCCCcCcEeHHHHHHHHHHHHhcCC--CCceEEcHHH
Confidence 976443210 000 00111123467899999999999998775 7899999764
|
| >1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=9.2e-21 Score=177.49 Aligned_cols=201 Identities=10% Similarity=-0.022 Sum_probs=143.5
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcch-----hhhhc------CC-CcEEeecCCCCHHHHHHHhcC--c
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-----AMESF------GT-YVESMAGDASNKKFLKTALRG--V 163 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~-----~~~~~------~~-~v~~v~~D~~d~~~~~~~~~~--~ 163 (305)
+|+||||||+||||++++++|+++|++|++++|++.. ..... +. +++++.+|+.|.+++.+++++ +
T Consensus 28 ~k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 107 (381)
T 1n7h_A 28 RKIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIKP 107 (381)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHCC
T ss_pred CCeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhccccccccceEEEECCCCCHHHHHHHHHhcCC
Confidence 3799999999999999999999999999999998654 11111 12 688999999999999999986 5
Q ss_pred cEEEECCcc----------------------hHhhhhhhcCCC-----EEEEEcccccccCCCC-------cccccchHH
Q 021928 164 RSIICPSEG----------------------FISNAGSLKGVQ-----HVILLSQLSVYRGSGG-------IQALMKGNA 209 (305)
Q Consensus 164 d~Vi~~~~g----------------------~~~~~a~~~gv~-----~~V~iSS~~~~~~~~~-------~~~~~~~~~ 209 (305)
|+|||+++. .+.+++.+.+++ +||++||..+|..... ..+...|.
T Consensus 108 d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~E~~~~~~~~~Y~- 186 (381)
T 1n7h_A 108 DEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPPQSETTPFHPRSPYA- 186 (381)
T ss_dssp SEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCSSBCTTSCCCCCSHHH-
T ss_pred CEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhCCccCCccEEEEeCcHHHhCCCCCCCCCCCCCCCCCchH-
Confidence 999998431 033445555665 9999999998864211 11112222
Q ss_pred HHHHHHHHHHHH----hCCCCEEEEecCCccc-CCCC----------------Cc--ceeeecCCCCCCccCHHHHHHHH
Q 021928 210 RKLAEQDESMLM----ASGIPYTIIRTGVLQN-TPGG----------------KQ--GFQFEEGCAANGSLSKEDAAFIC 266 (305)
Q Consensus 210 ~~~~~~aE~~l~----~~gi~~tilRPg~l~~-~~~~----------------~~--~~~~~~~~~~~~~Is~~DvA~~i 266 (305)
..|..+|.+++ +.+++++++|+....+ .... +. ...++.++....+++++|+|+++
T Consensus 187 -~sK~~~E~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~v~v~Dva~a~ 265 (381)
T 1n7h_A 187 -ASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGFAGDYVEAM 265 (381)
T ss_dssp -HHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEECEEHHHHHHHH
T ss_pred -HHHHHHHHHHHHHHHHhCCcEEEEEeCceeCCCCCCcchhHHHHHHHHHHHcCCCCeEEeCCCCceeeeEEHHHHHHHH
Confidence 23444565554 3589999999876432 1110 11 11233445557899999999999
Q ss_pred HHHhhCCCCCCcEEEEecCC-cCHHHHHHHHHHhhhh
Q 021928 267 VEALESIPQTGLIFEVVNGE-EKVSDWKKCFSRLMEK 302 (305)
Q Consensus 267 v~~l~~~~~~~~~~~v~~g~-~s~~d~~~~~~~l~~~ 302 (305)
+.+++++. +++|++++++ .++.|+++.+.++.+.
T Consensus 266 ~~~~~~~~--~~~~~i~~~~~~s~~e~~~~i~~~~g~ 300 (381)
T 1n7h_A 266 WLMLQQEK--PDDYVVATEEGHTVEEFLDVSFGYLGL 300 (381)
T ss_dssp HHHHTSSS--CCEEEECCSCEEEHHHHHHHHHHHTTC
T ss_pred HHHHhCCC--CCeEEeeCCCCCcHHHHHHHHHHHcCC
Confidence 99998754 4799999876 5999999999998875
|
| >2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=3.2e-21 Score=177.58 Aligned_cols=201 Identities=12% Similarity=0.085 Sum_probs=135.7
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchh---hh--hcC---CCcEEeecCCCCHHHHHHHhcCccEEEE
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA---ME--SFG---TYVESMAGDASNKKFLKTALRGVRSIIC 168 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~---~~--~~~---~~v~~v~~D~~d~~~~~~~~~~~d~Vi~ 168 (305)
++++||||||+||||++++++|+++|++|++++|+++.. .. .+. .+++++.+|+.|.+++.++++++|+|||
T Consensus 4 ~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih 83 (337)
T 2c29_D 4 QSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLDLPKAETHLTLWKADLADEGSFDEAIKGCTGVFH 83 (337)
T ss_dssp --CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHHHHHTSTTHHHHEEEEECCTTSTTTTHHHHTTCSEEEE
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHHHHHhcccCCCeEEEEEcCCCCHHHHHHHHcCCCEEEE
Confidence 458999999999999999999999999999999987531 11 111 2578999999999999999999999999
Q ss_pred CCcc---------------------hHhhhhhhcC-CCEEEEEcccccccCCCC--c--c---------------cccch
Q 021928 169 PSEG---------------------FISNAGSLKG-VQHVILLSQLSVYRGSGG--I--Q---------------ALMKG 207 (305)
Q Consensus 169 ~~~g---------------------~~~~~a~~~g-v~~~V~iSS~~~~~~~~~--~--~---------------~~~~~ 207 (305)
+++. .+.+++.+.+ +++||++||.+++..... . . +...|
T Consensus 84 ~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~riV~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y 163 (337)
T 2c29_D 84 VATPMDFESKDPENEVIKPTIEGMLGIMKSCAAAKTVRRLVFTSSAGTVNIQEHQLPVYDESCWSDMEFCRAKKMTAWMY 163 (337)
T ss_dssp CCCCCCSSCSSHHHHTHHHHHHHHHHHHHHHHHHSCCCEEEEECCGGGTSCSSSCCSEECTTCCCCHHHHHHHCCTTHHH
T ss_pred eccccCCCCCChHHHHHHHHHHHHHHHHHHHHhCCCccEEEEeeeHhhcccCCCCCcccCcccCCchhhhcccCCccchH
Confidence 7321 0234455666 899999999874321100 0 0 00112
Q ss_pred HHHHHHHHHHHHH----HhCCCCEEEEecCCcccCCCCCc--c-eee----ecCC-------CCCCccCHHHHHHHHHHH
Q 021928 208 NARKLAEQDESML----MASGIPYTIIRTGVLQNTPGGKQ--G-FQF----EEGC-------AANGSLSKEDAAFICVEA 269 (305)
Q Consensus 208 ~~~~~~~~aE~~l----~~~gi~~tilRPg~l~~~~~~~~--~-~~~----~~~~-------~~~~~Is~~DvA~~iv~~ 269 (305)
. ..|..+|.++ ++.++++++|||+.+.+...... . ... ..+. ....+++++|+|++++.+
T Consensus 164 ~--~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~v~Dva~a~~~~ 241 (337)
T 2c29_D 164 F--VSKTLAEQAAWKYAKENNIDFITIIPTLVVGPFIMSSMPPSLITALSPITGNEAHYSIIRQGQFVHLDDLCNAHIYL 241 (337)
T ss_dssp H--HHHHHHHHHHHHHHHHHTCCEEEEEECEEESCCSCSSCCHHHHHHTHHHHTCGGGHHHHTEEEEEEHHHHHHHHHHH
T ss_pred H--HHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCCccccccCCCCEEEHHHHHHHHHHH
Confidence 2 2233445443 34699999999999654321110 0 000 0011 112389999999999999
Q ss_pred hhCCCCCCcEEEEecCCcCHHHHHHHHHHhh
Q 021928 270 LESIPQTGLIFEVVNGEEKVSDWKKCFSRLM 300 (305)
Q Consensus 270 l~~~~~~~~~~~v~~g~~s~~d~~~~~~~l~ 300 (305)
++++.. +..|+++++..++.|+++.+.+..
T Consensus 242 ~~~~~~-~~~~~~~~~~~s~~e~~~~i~~~~ 271 (337)
T 2c29_D 242 FENPKA-EGRYICSSHDCIILDLAKMLREKY 271 (337)
T ss_dssp HHCTTC-CEEEEECCEEEEHHHHHHHHHHHC
T ss_pred hcCccc-CceEEEeCCCCCHHHHHHHHHHHC
Confidence 987544 346777666678999999998765
|
| >2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A | Back alignment and structure |
|---|
Probab=99.86 E-value=5e-22 Score=182.89 Aligned_cols=199 Identities=12% Similarity=0.125 Sum_probs=135.9
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh-----hc--CCCcEEeecCCCCHHHHHHHhcCccEEEEC
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME-----SF--GTYVESMAGDASNKKFLKTALRGVRSIICP 169 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~-----~~--~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~ 169 (305)
++|+||||||+||||++++++|+++|++|++++|++++... .+ ..+++++.+|+.|.+++.++++++|+|||+
T Consensus 8 ~~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih~ 87 (338)
T 2rh8_A 8 GKKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQELGDLKIFRADLTDELSFEAPIAGCDFVFHV 87 (338)
T ss_dssp -CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTHHHHHHGGGSCEEEEECCTTTSSSSHHHHTTCSEEEEE
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHHHHHhcCCCCcEEEEecCCCChHHHHHHHcCCCEEEEe
Confidence 36899999999999999999999999999999998653210 11 236889999999999999999999999987
Q ss_pred Ccc---------------------hHhhhhhhcC-CCEEEEEccccccc-C--CC-----------------Cc----cc
Q 021928 170 SEG---------------------FISNAGSLKG-VQHVILLSQLSVYR-G--SG-----------------GI----QA 203 (305)
Q Consensus 170 ~~g---------------------~~~~~a~~~g-v~~~V~iSS~~~~~-~--~~-----------------~~----~~ 203 (305)
++. .+.+++.+.+ +++||++||.+++. . .. +. ..
T Consensus 88 A~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~r~V~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~ 167 (338)
T 2rh8_A 88 ATPVHFASEDPENDMIKPAIQGVVNVMKACTRAKSVKRVILTSSAAAVTINQLDGTGLVVDEKNWTDIEFLTSAKPPTWG 167 (338)
T ss_dssp SSCCCC---------CHHHHHHHHHHHHHHHHCTTCCEEEEECCHHHHHHHHHTCSCCCCCTTTTTCC-------CCCCC
T ss_pred CCccCCCCCCcHHHHHHHHHHHHHHHHHHHHHcCCcCEEEEEecHHHeecCCcCCCCcccChhhccchhhccccCCccch
Confidence 320 0334556665 99999999986321 0 00 00 02
Q ss_pred ccchHHHHHHHHHHHH----HHhCCCCEEEEecCCcccCCCCCc--c-e------------eeecC------CCCCCccC
Q 021928 204 LMKGNARKLAEQDESM----LMASGIPYTIIRTGVLQNTPGGKQ--G-F------------QFEEG------CAANGSLS 258 (305)
Q Consensus 204 ~~~~~~~~~~~~aE~~----l~~~gi~~tilRPg~l~~~~~~~~--~-~------------~~~~~------~~~~~~Is 258 (305)
|..++. .+|.+ .++.++++++|||+.+.+...... . + .++.. .....+++
T Consensus 168 Y~~sK~-----~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~ 242 (338)
T 2rh8_A 168 YPASKT-----LAEKAAWKFAEENNIDLITVIPTLMAGSSLTSDVPSSIGLAMSLITGNEFLINGMKGMQMLSGSVSIAH 242 (338)
T ss_dssp CTTSCC-----HHHHHHHHHHHHHTCCEEEEEECEEESCCSSSSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHSSEEEEE
T ss_pred HHHHHH-----HHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCccccccccccccccCcccEEE
Confidence 333222 23333 344699999999999654321110 0 0 00000 01125899
Q ss_pred HHHHHHHHHHHhhCCCCCCcEEEEecCCcCHHHHHHHHHHhhh
Q 021928 259 KEDAAFICVEALESIPQTGLIFEVVNGEEKVSDWKKCFSRLME 301 (305)
Q Consensus 259 ~~DvA~~iv~~l~~~~~~~~~~~v~~g~~s~~d~~~~~~~l~~ 301 (305)
++|+|++++.+++++.. +..|+++++..++.|+++.+.+...
T Consensus 243 v~Dva~a~~~~~~~~~~-~~~~~~~~~~~s~~e~~~~l~~~~~ 284 (338)
T 2rh8_A 243 VEDVCRAHIFVAEKESA-SGRYICCAANTSVPELAKFLSKRYP 284 (338)
T ss_dssp HHHHHHHHHHHHHCTTC-CEEEEECSEEECHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHcCCCc-CCcEEEecCCCCHHHHHHHHHHhCC
Confidence 99999999999987544 4468887766789999999887654
|
| >4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.86 E-value=1.5e-21 Score=190.30 Aligned_cols=198 Identities=16% Similarity=0.133 Sum_probs=144.3
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchh------------------hhhcCCCcEEeecCCCCHHHHHH
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA------------------MESFGTYVESMAGDASNKKFLKT 158 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~------------------~~~~~~~v~~v~~D~~d~~~~~~ 158 (305)
.+|+||||||||+||++++++|.+.|++|++++|++... ......+++++.+|+.|.+.+.
T Consensus 149 ~~~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~- 227 (508)
T 4f6l_B 149 PLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV- 227 (508)
T ss_dssp CCEEEEESCTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCC-
T ss_pred CCCeEEEECCccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccCC-
Confidence 468999999999999999999999999999999997631 1123468999999999977777
Q ss_pred HhcCccEEEECCcc-------------------hHhhhhhhcCCCEEEEEccccc--ccCC----------CC---cccc
Q 021928 159 ALRGVRSIICPSEG-------------------FISNAGSLKGVQHVILLSQLSV--YRGS----------GG---IQAL 204 (305)
Q Consensus 159 ~~~~~d~Vi~~~~g-------------------~~~~~a~~~gv~~~V~iSS~~~--~~~~----------~~---~~~~ 204 (305)
++.++|+|||+++. .+.+++.+ ++++|||+||.++ +... .. ..+.
T Consensus 228 ~~~~~D~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~-~~~~~v~iSS~~vG~~~~~~~~~~~~~E~~~~~~~~~~ 306 (508)
T 4f6l_B 228 LPENMDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQ-HHARLIYVSTISVGTYFDIDTEDVTFSEADVYKGQLLT 306 (508)
T ss_dssp CSSCCSEEEECCCC--------CCHHHHHHHHHHHHHHHHT-TTCEEEEEEESCTTSEECTTCSCCEECTTCSCSSBCCC
T ss_pred CccCCCEEEECCceecCCCCHHHHhhhHHHHHHHHHHHHHh-CCCcEEEeCChhhccCCccCCcCcccccccccccccCC
Confidence 78899999998431 14455666 7899999999988 1100 00 0011
Q ss_pred cchHHHHHHHHHHHHHHh---CCCCEEEEecCCcccCCCCCc-------------------ceeee--cCCCCCCccCHH
Q 021928 205 MKGNARKLAEQDESMLMA---SGIPYTIIRTGVLQNTPGGKQ-------------------GFQFE--EGCAANGSLSKE 260 (305)
Q Consensus 205 ~~~~~~~~~~~aE~~l~~---~gi~~tilRPg~l~~~~~~~~-------------------~~~~~--~~~~~~~~Is~~ 260 (305)
.. +...|..+|.++++ .|++++++|||.+.+...... ...++ .++....+++++
T Consensus 307 ~~--Y~~sK~~~E~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~~~~v~v~ 384 (508)
T 4f6l_B 307 SP--YTRSKFYSELKVLEAVNNGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIGVSMAEMPVDFSFVD 384 (508)
T ss_dssp SH--HHHHHHHHHHHHHHHHHTTCEEEEEEECCEESCSSSCCCCTTCTTCHHHHHHHHHTTCSEEETTGGGSEEECEEHH
T ss_pred Cc--HHHHHHHHHHHHHHHHHcCCCEEEEecceeccCCCCCcccCCcchHHHHHHHHHHHHcCCCCCCccCceEEEEcHH
Confidence 11 22335556777665 899999999999664322110 01112 234557799999
Q ss_pred HHHHHHHHHhhCCCCCCcEEEEecCC-cCHHHHHHHHHHh
Q 021928 261 DAAFICVEALESIPQTGLIFEVVNGE-EKVSDWKKCFSRL 299 (305)
Q Consensus 261 DvA~~iv~~l~~~~~~~~~~~v~~g~-~s~~d~~~~~~~l 299 (305)
|+|++++.++.++. .+++||+++++ .++.++.+.+.+.
T Consensus 385 DvA~ai~~~~~~~~-~~~~~nl~~~~~~s~~el~~~i~~~ 423 (508)
T 4f6l_B 385 TTARQIVALAQVNT-PQIIYHVLSPNKMPVKSLLECVKRK 423 (508)
T ss_dssp HHHHHHHHHTTBCC-SCSEEEESCSCEEEHHHHHHHHHSS
T ss_pred HHHHHHHHHHhCCC-CCCEEEeCCCCCCCHHHHHHHHHHc
Confidence 99999999998877 78999999876 5889998888753
|
| >1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2 | Back alignment and structure |
|---|
Probab=99.84 E-value=4.3e-20 Score=186.50 Aligned_cols=205 Identities=16% Similarity=0.124 Sum_probs=146.4
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhh-------hhcCCCcEEeecCCCCHHHHHHHhc--CccEEE
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM-------ESFGTYVESMAGDASNKKFLKTALR--GVRSII 167 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~-------~~~~~~v~~v~~D~~d~~~~~~~~~--~~d~Vi 167 (305)
++|+||||||+|+||++++++|+++|++|++++|+..... .....+++++.+|+.|.+++.++++ ++|+||
T Consensus 10 ~~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~D~Vi 89 (699)
T 1z45_A 10 TSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEYKIDSVI 89 (699)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHSCCCEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHHHHHhhccCCceEEEEcCCCCHHHHHHHHHhCCCCEEE
Confidence 4689999999999999999999999999999999764311 1124568899999999999999998 899999
Q ss_pred ECCcc----------------------hHhhhhhhcCCCEEEEEcccccccCCC------------CcccccchHHHHHH
Q 021928 168 CPSEG----------------------FISNAGSLKGVQHVILLSQLSVYRGSG------------GIQALMKGNARKLA 213 (305)
Q Consensus 168 ~~~~g----------------------~~~~~a~~~gv~~~V~iSS~~~~~~~~------------~~~~~~~~~~~~~~ 213 (305)
|+++. .+.+++++.++++||++||.++|.... ...+... ....|
T Consensus 90 h~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~iV~~SS~~vyg~~~~~~~~~~~~E~~~~~p~~~--Y~~sK 167 (699)
T 1z45_A 90 HFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSSATVYGDATRFPNMIPIPEECPLGPTNP--YGHTK 167 (699)
T ss_dssp ECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCCGGGSTTCCSBCTTSCCCCCSH--HHHHH
T ss_pred ECCcccCcCccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECcHHHhCCCccccccCCccccCCCCCCCh--HHHHH
Confidence 98431 134456778899999999998875321 0011112 22234
Q ss_pred HHHHHHHHh------CCCCEEEEecCCcccC-CC----------------------CC--ccee-ee------cCCCCCC
Q 021928 214 EQDESMLMA------SGIPYTIIRTGVLQNT-PG----------------------GK--QGFQ-FE------EGCAANG 255 (305)
Q Consensus 214 ~~aE~~l~~------~gi~~tilRPg~l~~~-~~----------------------~~--~~~~-~~------~~~~~~~ 255 (305)
..+|.+++. .+++++++||+.+.+. +. .+ ..+. ++ .+.....
T Consensus 168 ~~~E~~~~~~~~~~~~g~~~~ilR~~~vyG~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~ 247 (699)
T 1z45_A 168 YAIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGTPIRD 247 (699)
T ss_dssp HHHHHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC------CCSSCEEC
T ss_pred HHHHHHHHHHHHhccCCCcEEEEEeccccCCCcccccccccccchhHHHHHHHHHHhcCCCceEEeCCcccCCCCCeeEe
Confidence 456666543 6899999999875432 10 00 0111 11 2334467
Q ss_pred ccCHHHHHHHHHHHhhCC------CCCCcEEEEecCC-cCHHHHHHHHHHhhhhc
Q 021928 256 SLSKEDAAFICVEALESI------PQTGLIFEVVNGE-EKVSDWKKCFSRLMEKT 303 (305)
Q Consensus 256 ~Is~~DvA~~iv~~l~~~------~~~~~~~~v~~g~-~s~~d~~~~~~~l~~~~ 303 (305)
+|+++|+|++++.+++.+ ...+++||+++++ .++.|+++.+.++.+++
T Consensus 248 ~i~v~Dva~a~~~a~~~~~~~~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~~ 302 (699)
T 1z45_A 248 YIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKASGID 302 (699)
T ss_dssp EEEHHHHHHHHHHHHHHHHHSCTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTCC
T ss_pred eEEHHHHHHHHHHHHhhhhccccccCCceEEEECCCCCCcHHHHHHHHHHHhCCC
Confidence 899999999999998642 2235799999876 58999999999988764
|
| >2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A | Back alignment and structure |
|---|
Probab=99.84 E-value=1.7e-20 Score=164.68 Aligned_cols=180 Identities=13% Similarity=0.146 Sum_probs=132.4
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCC--eEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEECCcc--
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRT--RIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG-- 172 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~g-- 172 (305)
++|+|+||||+|+||++++++|+++|+ +|++++|++++.......++.++.+|++|.+++.++++++|+|||+++.
T Consensus 17 ~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~~~ 96 (242)
T 2bka_A 17 QNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKLDDYASAFQGHDVGFCCLGTTR 96 (242)
T ss_dssp TCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGGGCEEEECCGGGGGGGGGGGSSCSEEEECCCCCH
T ss_pred cCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccccCCceEEecCcCCHHHHHHHhcCCCEEEECCCccc
Confidence 358999999999999999999999999 9999999986643322346889999999999999999999999998441
Q ss_pred -----------------hHhhhhhhcCCCEEEEEcccccccCCCCcccccchHHHHHHHHHHHHHHhCCCC-EEEEecCC
Q 021928 173 -----------------FISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMASGIP-YTIIRTGV 234 (305)
Q Consensus 173 -----------------~~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~~~~~~aE~~l~~~gi~-~tilRPg~ 234 (305)
.+.+++++.++++||++||.+++.+.. ..|. ..|...|.+++..+++ +++||||+
T Consensus 97 ~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~--~~Y~-----~sK~~~e~~~~~~~~~~~~~vrpg~ 169 (242)
T 2bka_A 97 GKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADKSSN--FLYL-----QVKGEVEAKVEELKFDRYSVFRPGV 169 (242)
T ss_dssp HHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTTCS--SHHH-----HHHHHHHHHHHTTCCSEEEEEECCE
T ss_pred ccCCcccceeeeHHHHHHHHHHHHHCCCCEEEEEccCcCCCCCc--chHH-----HHHHHHHHHHHhcCCCCeEEEcCce
Confidence 133456678899999999998876422 2232 2355678889999995 99999999
Q ss_pred cccCCCCC---cce------eeecCCCCCCccCHHHHHHHHHHHhhCCCCCCcEEEEec
Q 021928 235 LQNTPGGK---QGF------QFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVVN 284 (305)
Q Consensus 235 l~~~~~~~---~~~------~~~~~~~~~~~Is~~DvA~~iv~~l~~~~~~~~~~~v~~ 284 (305)
+.+..... ... ..+.......+++++|+|++++.++.++... ..+.+.+
T Consensus 170 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~~~~-~~~~~~~ 227 (242)
T 2bka_A 170 LLCDRQESRPGEWLVRKFFGSLPDSWASGHSVPVVTVVRAMLNNVVRPRDK-QMELLEN 227 (242)
T ss_dssp EECTTGGGSHHHHHHHHHHCSCCTTGGGGTEEEHHHHHHHHHHHHTSCCCS-SEEEEEH
T ss_pred ecCCCCCCcHHHHHHHHhhcccCccccCCcccCHHHHHHHHHHHHhCcccc-CeeEeeH
Confidence 65442110 000 0000001235799999999999999876553 4566654
|
| >3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=99.84 E-value=1.1e-20 Score=184.81 Aligned_cols=195 Identities=17% Similarity=0.158 Sum_probs=134.9
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEECCcc-----
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG----- 172 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~g----- 172 (305)
+|+||||||+|+||++|+++|+++|++|++++|++.+. +.+.+|+.+ .+.++++++|+|||+++.
T Consensus 147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~--------~~v~~d~~~--~~~~~l~~~D~Vih~A~~~~~~~ 216 (516)
T 3oh8_A 147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKP--------GKRFWDPLN--PASDLLDGADVLVHLAGEPIFGR 216 (516)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCT--------TCEECCTTS--CCTTTTTTCSEEEECCCC-----
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCc--------cceeecccc--hhHHhcCCCCEEEECCCCccccc
Confidence 68999999999999999999999999999999997543 225677764 346778899999998331
Q ss_pred ------------------hHhhh-hhhcCCCEEEEEcccccccCCCCcc------cccchHHHHHHHHHH---HHHHhCC
Q 021928 173 ------------------FISNA-GSLKGVQHVILLSQLSVYRGSGGIQ------ALMKGNARKLAEQDE---SMLMASG 224 (305)
Q Consensus 173 ------------------~~~~~-a~~~gv~~~V~iSS~~~~~~~~~~~------~~~~~~~~~~~~~aE---~~l~~~g 224 (305)
.+.++ ++..++++||++||.++|....... ..........+...| .+....+
T Consensus 217 ~~~~~~~~~~~~Nv~gt~~ll~a~a~~~~~~r~V~~SS~~vyg~~~~~~~~~E~~~~~~~~y~~~~~~~E~~~~~~~~~g 296 (516)
T 3oh8_A 217 FNDSHKEAIRESRVLPTKFLAELVAESTQCTTMISASAVGFYGHDRGDEILTEESESGDDFLAEVCRDWEHATAPASDAG 296 (516)
T ss_dssp CCGGGHHHHHHHTHHHHHHHHHHHHHCSSCCEEEEEEEGGGGCSEEEEEEECTTSCCCSSHHHHHHHHHHHTTHHHHHTT
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCcceEecCCCCCCccCCCCCCCcChHHHHHHHHHHHHHHHHhCC
Confidence 03344 5667899999999999886211100 001111122222233 3445789
Q ss_pred CCEEEEecCCcccCCC-----------CCcceeeecCCCCCCccCHHHHHHHHHHHhhCCCCCCcEEEEecCC-cCHHHH
Q 021928 225 IPYTIIRTGVLQNTPG-----------GKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVVNGE-EKVSDW 292 (305)
Q Consensus 225 i~~tilRPg~l~~~~~-----------~~~~~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~~~~~~~~v~~g~-~s~~d~ 292 (305)
+++++|||+.+++... .+....++.++....+|+++|+|++++.+++++.. +..||+++++ .++.|+
T Consensus 297 i~~~ilRp~~v~Gp~~~~~~~~~~~~~~g~~~~~g~g~~~~~~i~v~Dva~ai~~~l~~~~~-~g~~ni~~~~~~s~~el 375 (516)
T 3oh8_A 297 KRVAFIRTGVALSGRGGMLPLLKTLFSTGLGGKFGDGTSWFSWIAIDDLTDIYYRAIVDAQI-SGPINAVAPNPVSNADM 375 (516)
T ss_dssp CEEEEEEECEEEBTTBSHHHHHHHTTC---CCCCTTSCCEECEEEHHHHHHHHHHHHHCTTC-CEEEEESCSCCEEHHHH
T ss_pred CCEEEEEeeEEECCCCChHHHHHHHHHhCCCcccCCCCceEceEeHHHHHHHHHHHHhCccc-CCcEEEECCCCCCHHHH
Confidence 9999999999665321 11122233445557899999999999999988764 4589999865 589999
Q ss_pred HHHHHHhhhhc
Q 021928 293 KKCFSRLMEKT 303 (305)
Q Consensus 293 ~~~~~~l~~~~ 303 (305)
++.+.++++++
T Consensus 376 ~~~i~~~~g~~ 386 (516)
T 3oh8_A 376 TKILATSMHRP 386 (516)
T ss_dssp HHHTTC-----
T ss_pred HHHHHHHhCCC
Confidence 99998887764
|
| >2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=99.84 E-value=6.3e-20 Score=163.53 Aligned_cols=187 Identities=16% Similarity=0.062 Sum_probs=137.9
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcC--ccEEEECCcc----
Q 021928 99 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRG--VRSIICPSEG---- 172 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~--~d~Vi~~~~g---- 172 (305)
|+|+||||+|+||++++++|+ +|++|++++|++... .+ +.+|+.|.+++.+++++ +|+|||+++.
T Consensus 1 m~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~~~-----~~---~~~Dl~~~~~~~~~~~~~~~d~vi~~a~~~~~~ 71 (273)
T 2ggs_A 1 MRTLITGASGQLGIELSRLLS-ERHEVIKVYNSSEIQ-----GG---YKLDLTDFPRLEDFIIKKRPDVIINAAAMTDVD 71 (273)
T ss_dssp CCEEEETTTSHHHHHHHHHHT-TTSCEEEEESSSCCT-----TC---EECCTTSHHHHHHHHHHHCCSEEEECCCCCCHH
T ss_pred CEEEEECCCChhHHHHHHHHh-cCCeEEEecCCCcCC-----CC---ceeccCCHHHHHHHHHhcCCCEEEECCcccChh
Confidence 579999999999999999999 589999999987422 22 88999999999999986 9999998431
Q ss_pred ------------------hHhhhhhhcCCCEEEEEcccccccCCCCc-------ccccchHHHHHHHHHHHHHHhCCCCE
Q 021928 173 ------------------FISNAGSLKGVQHVILLSQLSVYRGSGGI-------QALMKGNARKLAEQDESMLMASGIPY 227 (305)
Q Consensus 173 ------------------~~~~~a~~~gv~~~V~iSS~~~~~~~~~~-------~~~~~~~~~~~~~~aE~~l~~~gi~~ 227 (305)
.+.+++.+.++ +||++||..++.+...+ .+... +...|..+|.+++. +++
T Consensus 72 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~iv~~SS~~~~~~~~~~~~e~~~~~~~~~--Y~~sK~~~e~~~~~--~~~ 146 (273)
T 2ggs_A 72 KCEIEKEKAYKINAEAVRHIVRAGKVIDS-YIVHISTDYVFDGEKGNYKEEDIPNPINY--YGLSKLLGETFALQ--DDS 146 (273)
T ss_dssp HHHHCHHHHHHHHTHHHHHHHHHHHHTTC-EEEEEEEGGGSCSSSCSBCTTSCCCCSSH--HHHHHHHHHHHHCC--TTC
T ss_pred hhhhCHHHHHHHhHHHHHHHHHHHHHhCC-eEEEEecceeEcCCCCCcCCCCCCCCCCH--HHHHHHHHHHHHhC--CCe
Confidence 13345666676 99999999988643221 11112 22235567777776 899
Q ss_pred EEEecCCcccCCC----------CCcceeeecCCCCCCccCHHHHHHHHHHHhhCCCCCCcEEEEecCCcCHHHHHHHHH
Q 021928 228 TIIRTGVLQNTPG----------GKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVVNGEEKVSDWKKCFS 297 (305)
Q Consensus 228 tilRPg~l~~~~~----------~~~~~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~~~~~~~~v~~g~~s~~d~~~~~~ 297 (305)
+++||+.+.+... .+..... .++ ...+++++|+|++++.+++++. +.+|++.+...++.|+++.+.
T Consensus 147 ~~iR~~~v~G~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~dva~~i~~~~~~~~--~g~~~i~~~~~s~~e~~~~~~ 222 (273)
T 2ggs_A 147 LIIRTSGIFRNKGFPIYVYKTLKEGKTVFA-FKG-YYSPISARKLASAILELLELRK--TGIIHVAGERISRFELALKIK 222 (273)
T ss_dssp EEEEECCCBSSSSHHHHHHHHHHTTCCEEE-ESC-EECCCBHHHHHHHHHHHHHHTC--CEEEECCCCCEEHHHHHHHHH
T ss_pred EEEeccccccccHHHHHHHHHHHcCCCEEe-ecC-CCCceEHHHHHHHHHHHHhcCc--CCeEEECCCcccHHHHHHHHH
Confidence 9999999764111 1111111 122 5678999999999999998654 459999983358999999999
Q ss_pred Hhhhhc
Q 021928 298 RLMEKT 303 (305)
Q Consensus 298 ~l~~~~ 303 (305)
+..+.+
T Consensus 223 ~~~g~~ 228 (273)
T 2ggs_A 223 EKFNLP 228 (273)
T ss_dssp HHTTCC
T ss_pred HHhCCC
Confidence 998865
|
| >2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=8.6e-20 Score=163.52 Aligned_cols=203 Identities=9% Similarity=0.083 Sum_probs=139.1
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh---hcC--CCcEEeecCCCCHHHHHHHhc-------Ccc
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFG--TYVESMAGDASNKKFLKTALR-------GVR 164 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~---~~~--~~v~~v~~D~~d~~~~~~~~~-------~~d 164 (305)
.+++|+||||+|+||++++++|+++|++|+++.|+.+...+ .+. .++.++.+|++|.+++.++++ ++|
T Consensus 15 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 94 (278)
T 2bgk_A 15 QDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKLD 94 (278)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred cCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 46899999999999999999999999999999998754322 122 268999999999999888776 789
Q ss_pred EEEECCcc------h----------------------Hhh----hhhhcCCCEEEEEcccccccCCC-CcccccchHHH-
Q 021928 165 SIICPSEG------F----------------------ISN----AGSLKGVQHVILLSQLSVYRGSG-GIQALMKGNAR- 210 (305)
Q Consensus 165 ~Vi~~~~g------~----------------------~~~----~a~~~gv~~~V~iSS~~~~~~~~-~~~~~~~~~~~- 210 (305)
+|||+++. . +.. ..++.+.++||++||..++.+.. ....|..++..
T Consensus 95 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~Y~~sK~a~ 174 (278)
T 2bgk_A 95 IMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYTATKHAV 174 (278)
T ss_dssp EEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCTTSCHHHHHHHHHH
T ss_pred EEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCeEEEEeeccccCCCCCCCcchHHHHHHH
Confidence 99987331 0 111 12335678999999998886644 44444433221
Q ss_pred -HHHHHHHHHHHhCCCCEEEEecCCcccCCCCCc-c---ee---e--ecCCCCCCccCHHHHHHHHHHHhhCCC--CCCc
Q 021928 211 -KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQ-G---FQ---F--EEGCAANGSLSKEDAAFICVEALESIP--QTGL 278 (305)
Q Consensus 211 -~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~~-~---~~---~--~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~ 278 (305)
.+.+.....+...++++++||||++........ . .. + ..+.....+++++|+|++++.++.++. ..|+
T Consensus 175 ~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~ 254 (278)
T 2bgk_A 175 LGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAEDVADAVAYLAGDESKYVSGL 254 (278)
T ss_dssp HHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTCSSCSCCCCHHHHHHHHHHHHSGGGTTCCSC
T ss_pred HHHHHHHHHHHhhcCcEEEEEEeceecchhhhhhcccchhHHHHhhhcccccccccCCHHHHHHHHHHHcCcccccCCCC
Confidence 111112222345799999999999654322110 0 00 0 011123457899999999999996543 4689
Q ss_pred EEEEecCC-cCHHHHHHHHHHh
Q 021928 279 IFEVVNGE-EKVSDWKKCFSRL 299 (305)
Q Consensus 279 ~~~v~~g~-~s~~d~~~~~~~l 299 (305)
.|++.+|. .++.++.+.+.++
T Consensus 255 ~~~v~gg~~~~~~e~~~~i~~~ 276 (278)
T 2bgk_A 255 NLVIDGGYTRTNPAFPTALKHG 276 (278)
T ss_dssp EEEESTTGGGCCTHHHHHSCSC
T ss_pred EEEECCcccccCCccchhhhhh
Confidence 99999886 4788888887654
|
| >3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=99.82 E-value=7.1e-19 Score=158.27 Aligned_cols=199 Identities=14% Similarity=0.133 Sum_probs=135.2
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh---hcCCCcEEeecCCCCHHHHHHHhc-------CccEE
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALR-------GVRSI 166 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~---~~~~~v~~v~~D~~d~~~~~~~~~-------~~d~V 166 (305)
++|+|+||||+|+||++++++|+++|++|++++|+.++..+ ..+.++.++.+|++|.+++.++++ ++|+|
T Consensus 4 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~l 83 (281)
T 3m1a_A 4 SAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAYPDRAEAISLDVTDGERIDVVAADVLARYGRVDVL 83 (281)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCSEE
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCceEEEeeCCCHHHHHHHHHHHHHhCCCCCEE
Confidence 46899999999999999999999999999999999876433 245679999999999998888776 78999
Q ss_pred EECCcch------------------------------HhhhhhhcCCCEEEEEcccccccCCCCcccccchHHHH--HHH
Q 021928 167 ICPSEGF------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK--LAE 214 (305)
Q Consensus 167 i~~~~g~------------------------------~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~~--~~~ 214 (305)
||+++.. +...+++.+.++||++||..++.+..+...|..++... +.+
T Consensus 84 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~ 163 (281)
T 3m1a_A 84 VNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRERGSGSVVNISSFGGQLSFAGFSAYSATKAALEQLSE 163 (281)
T ss_dssp EECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHHHHHHHHHHHH
T ss_pred EECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEcCccccCCCCCchHHHHHHHHHHHHHH
Confidence 9984410 11223556788999999998887766665665443211 111
Q ss_pred HHHHHHHhCCCCEEEEecCCcccCCCCCccee-----------------eecCCCCCCccCHHHHHHHHHHHhhCCCCCC
Q 021928 215 QDESMLMASGIPYTIIRTGVLQNTPGGKQGFQ-----------------FEEGCAANGSLSKEDAAFICVEALESIPQTG 277 (305)
Q Consensus 215 ~aE~~l~~~gi~~tilRPg~l~~~~~~~~~~~-----------------~~~~~~~~~~Is~~DvA~~iv~~l~~~~~~~ 277 (305)
.....+...++++++++||++........... +........+.+++|+|++++.+++++.. +
T Consensus 164 ~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~~~~~~~~~~-~ 242 (281)
T 3m1a_A 164 GLADEVAPFGIKVLIVEPGAFRTNLFGKGAAYFSEENPAYAEKVGPTRQLVQGSDGSQPGDPAKAAAAIRLALDTEKT-P 242 (281)
T ss_dssp HHHHHHGGGTEEEEEEEECCBCCTTTCCCCEEECCBCTTTHHHHHHHHHHHHC-----CBCHHHHHHHHHHHHHSSSC-C
T ss_pred HHHHHhhccCcEEEEEecCccccccccccccccCCcchhhHHHhHHHHHHHhhccCCCCCCHHHHHHHHHHHHhCCCC-C
Confidence 12222344799999999999643321110000 00112234578899999999999987654 5
Q ss_pred cEEEEecCCc-CHHHHHHHH
Q 021928 278 LIFEVVNGEE-KVSDWKKCF 296 (305)
Q Consensus 278 ~~~~v~~g~~-s~~d~~~~~ 296 (305)
..|++.++.. .+.+....+
T Consensus 243 ~~~~l~s~~~~~i~g~~~~i 262 (281)
T 3m1a_A 243 LRLALGGDAVDFLTGHLDSV 262 (281)
T ss_dssp SEEEESHHHHHHHHHHHHHH
T ss_pred eEEecCchHHHHHHHHHHHH
Confidence 6888887653 334433333
|
| >1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.81 E-value=5.4e-19 Score=158.81 Aligned_cols=203 Identities=13% Similarity=0.144 Sum_probs=128.9
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh---c------CCCcEEeecCCCCHHHHHHHhc------
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---F------GTYVESMAGDASNKKFLKTALR------ 161 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~------~~~v~~v~~D~~d~~~~~~~~~------ 161 (305)
++|+|+||||+|+||++++++|+++|++|++++|++++..+. + +.++.++.+|++|.+++.++++
T Consensus 5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 84 (278)
T 1spx_A 5 AEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKF 84 (278)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHHHc
Confidence 458999999999999999999999999999999997653221 1 2357899999999998888776
Q ss_pred -CccEEEECCcc-------------h-----------------Hhhh----hhhcCCCEEEEEccccc-ccCCCCccccc
Q 021928 162 -GVRSIICPSEG-------------F-----------------ISNA----GSLKGVQHVILLSQLSV-YRGSGGIQALM 205 (305)
Q Consensus 162 -~~d~Vi~~~~g-------------~-----------------~~~~----a~~~gv~~~V~iSS~~~-~~~~~~~~~~~ 205 (305)
++|++||+++. . +..+ +++.+ ++||++||..+ +.+......|.
T Consensus 85 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~~Y~ 163 (278)
T 1spx_A 85 GKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK-GEIVNISSIASGLHATPDFPYYS 163 (278)
T ss_dssp SCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTTSSSSCCTTSHHHH
T ss_pred CCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEecccccccCCCCccHHH
Confidence 89999988431 0 0011 22235 89999999987 65554444554
Q ss_pred chHH--HHHHHHHHHHHHhCCCCEEEEecCCcccCCCCCc----cee------e---ecCCCCCCccCHHHHHHHHHHHh
Q 021928 206 KGNA--RKLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQ----GFQ------F---EEGCAANGSLSKEDAAFICVEAL 270 (305)
Q Consensus 206 ~~~~--~~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~~----~~~------~---~~~~~~~~~Is~~DvA~~iv~~l 270 (305)
.++. ..+.+.....+...++++++|+||++........ ... . ........+++++|+|++++.++
T Consensus 164 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~v~~l~ 243 (278)
T 1spx_A 164 IAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAGVMGQPQDIAEVIAFLA 243 (278)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHHHCTTSSCBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccCccccccccCchhhhhhhHHHHHHHhcCCCcCCCCHHHHHHHHHHHc
Confidence 4332 1112222233445799999999999654321110 000 0 00011235789999999999999
Q ss_pred hCCC---CCCcEEEEecCC-cCHHHHHHHHHHhh
Q 021928 271 ESIP---QTGLIFEVVNGE-EKVSDWKKCFSRLM 300 (305)
Q Consensus 271 ~~~~---~~~~~~~v~~g~-~s~~d~~~~~~~l~ 300 (305)
..+. ..|+.+++.+|. .++.++.+.+.++.
T Consensus 244 s~~~~~~~tG~~~~vdgG~~~~~~~~~~~~~~~~ 277 (278)
T 1spx_A 244 DRKTSSYIIGHQLVVDGGSSLIMGLHCQDFAKLL 277 (278)
T ss_dssp CHHHHTTCCSCEEEESTTGGGC------------
T ss_pred CccccCcccCcEEEECCCcccccCcccccHHHHh
Confidence 7543 458999999886 47889988887754
|
| >2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=99.81 E-value=1.4e-18 Score=154.81 Aligned_cols=190 Identities=14% Similarity=0.150 Sum_probs=131.0
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh---c-----CCCcEEeecCCCCHHHHHHHhc------C
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---F-----GTYVESMAGDASNKKFLKTALR------G 162 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~-----~~~v~~v~~D~~d~~~~~~~~~------~ 162 (305)
.+|+|+||||+|+||++++++|+++|++|++++|++++..+. + +.++.++.+|++|.+++.++++ +
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 85 (260)
T 2z1n_A 6 QGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARDLGG 85 (260)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHTTC
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHHhcC
Confidence 458999999999999999999999999999999987653321 1 2268899999999999988886 6
Q ss_pred ccEEEECCcc----h--------------------------HhhhhhhcCCCEEEEEcccccccCCCCcccccchHH--H
Q 021928 163 VRSIICPSEG----F--------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA--R 210 (305)
Q Consensus 163 ~d~Vi~~~~g----~--------------------------~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~--~ 210 (305)
+|++||+++. . +...+++.+.++||++||..++.+......|..++. .
T Consensus 86 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~ 165 (260)
T 2z1n_A 86 ADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKGWGRMVYIGSVTLLRPWQDLALSNIMRLPVI 165 (260)
T ss_dssp CSEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHTHHHH
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCCCchhHHHHHHHH
Confidence 9999988431 0 111234567789999999988876555555544332 2
Q ss_pred HHHHHHHHHHHhCCCCEEEEecCCcccCCCC----------C--cc---eeeecCCCCCCccCHHHHHHHHHHHhhCCC-
Q 021928 211 KLAEQDESMLMASGIPYTIIRTGVLQNTPGG----------K--QG---FQFEEGCAANGSLSKEDAAFICVEALESIP- 274 (305)
Q Consensus 211 ~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~----------~--~~---~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~- 274 (305)
.+.+.....+...++++++|+||++...... . .. ..+........+.+++|+|++++.++..+.
T Consensus 166 ~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v~~l~s~~~~ 245 (260)
T 2z1n_A 166 GVVRTLALELAPHGVTVNAVLPSLILTDRVRSLAEERARRSGITVEEALKSMASRIPMGRVGKPEELASVVAFLASEKAS 245 (260)
T ss_dssp HHHHHHHHHHGGGTEEEEEEEECHHHHCCCC-----------------------CCTTSSCCCHHHHHHHHHHHTSGGGT
T ss_pred HHHHHHHHHHhhhCeEEEEEEECCcccchhhhhhhhhhcccCCcHHHHHHHHHhcCCCCCccCHHHHHHHHHHHhCcccc
Confidence 2222233345567999999999995432211 0 00 001011122346799999999999997533
Q ss_pred -CCCcEEEEecCC
Q 021928 275 -QTGLIFEVVNGE 286 (305)
Q Consensus 275 -~~~~~~~v~~g~ 286 (305)
..|+.+++.+|.
T Consensus 246 ~~tG~~i~vdGG~ 258 (260)
T 2z1n_A 246 FITGAVIPVDGGA 258 (260)
T ss_dssp TCCSCEEEESTTT
T ss_pred CCCCCEEEeCCCc
Confidence 468999998763
|
| >2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=99.81 E-value=8e-19 Score=154.79 Aligned_cols=189 Identities=12% Similarity=0.119 Sum_probs=130.5
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh-------hcCCCcEEeecCCCCHHHHHHHhc-------Cc
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME-------SFGTYVESMAGDASNKKFLKTALR-------GV 163 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~-------~~~~~v~~v~~D~~d~~~~~~~~~-------~~ 163 (305)
+|+|+||||+|+||++++++|+++|++|++++|++++..+ ..+.++.++.+|++|.+++.++++ ++
T Consensus 2 ~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 81 (250)
T 2cfc_A 2 SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFGAI 81 (250)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence 5899999999999999999999999999999998765322 113468899999999999888776 78
Q ss_pred cEEEECCcc--------h-------------------------HhhhhhhcCCCEEEEEcccccccCCCCcccccchHHH
Q 021928 164 RSIICPSEG--------F-------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR 210 (305)
Q Consensus 164 d~Vi~~~~g--------~-------------------------~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~ 210 (305)
|+|||+++. . +...+++.+.++||++||..++.+......|..++..
T Consensus 82 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a 161 (250)
T 2cfc_A 82 DVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIASVASLVAFPGRSAYTTSKGA 161 (250)
T ss_dssp CEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred CEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCCCCchhHHHHHHH
Confidence 999988421 1 0111234578899999999887665555555443321
Q ss_pred --HHHHHHHHHHHhCCCCEEEEecCCcccCCCCC----ccee--eecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEE
Q 021928 211 --KLAEQDESMLMASGIPYTIIRTGVLQNTPGGK----QGFQ--FEEGCAANGSLSKEDAAFICVEALESIP--QTGLIF 280 (305)
Q Consensus 211 --~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~----~~~~--~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~ 280 (305)
.+.+.....+...+++++++|||++....... .... +........+.+++|+|++++.++.++. ..|+.+
T Consensus 162 ~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~ 241 (250)
T 2cfc_A 162 VLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQWRLDQPELRDQVLARIPQKEIGTAAQVADAVMFLAGEDATYVNGAAL 241 (250)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECSBCSTTTHHHHTSHHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSTTCTTCCSCEE
T ss_pred HHHHHHHHHHHhcccCeEEEEEEeCcCccCccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhhcccCCEE
Confidence 11122222334569999999999965432211 0000 0011222456799999999999997654 358999
Q ss_pred EEecCC
Q 021928 281 EVVNGE 286 (305)
Q Consensus 281 ~v~~g~ 286 (305)
++.+|.
T Consensus 242 ~v~gG~ 247 (250)
T 2cfc_A 242 VMDGAY 247 (250)
T ss_dssp EESTTG
T ss_pred EECCce
Confidence 998775
|
| >1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=1.1e-18 Score=155.83 Aligned_cols=189 Identities=14% Similarity=0.120 Sum_probs=131.0
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh---hcCCCcEEeecCCCCHHHHHHHhc-------CccEE
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALR-------GVRSI 166 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~---~~~~~v~~v~~D~~d~~~~~~~~~-------~~d~V 166 (305)
.+|+|+||||+|+||++++++|+++|++|++++|++++..+ .....+.++.+|++|.+++.++++ ++|++
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~l 85 (260)
T 1nff_A 6 TGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHVL 85 (260)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhcCceEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 45899999999999999999999999999999999765432 223357889999999999888876 79999
Q ss_pred EECCcc----h--------------------------HhhhhhhcCCCEEEEEcccccccCCCCcccccchHHH--HHHH
Q 021928 167 ICPSEG----F--------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--KLAE 214 (305)
Q Consensus 167 i~~~~g----~--------------------------~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~--~~~~ 214 (305)
||+++. . +...+++.+.++||++||..++.+......|..++.. .+.+
T Consensus 86 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~ 165 (260)
T 1nff_A 86 VNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGLTK 165 (260)
T ss_dssp EECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHH
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEeehhhcCCCCCchhHHHHHHHHHHHHH
Confidence 988431 0 1122345677899999999887765555555443321 1112
Q ss_pred HHHHHHHhCCCCEEEEecCCcccCCCCCcceeeecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEEEEecCC
Q 021928 215 QDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVNGE 286 (305)
Q Consensus 215 ~aE~~l~~~gi~~tilRPg~l~~~~~~~~~~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~v~~g~ 286 (305)
.....+...++++++|+||++...........+. ......+.+++|+|++++.++..+. ..|+.|++.+|.
T Consensus 166 ~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~-~~~~~~~~~~~dvA~~v~~l~s~~~~~~~G~~~~v~gG~ 238 (260)
T 1nff_A 166 STALELGPSGIRVNSIHPGLVKTPMTDWVPEDIF-QTALGRAAEPVEVSNLVVYLASDESSYSTGAEFVVDGGT 238 (260)
T ss_dssp HHHHHHGGGTEEEEEEEECCBCSGGGTTSCTTCS-CCSSSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred HHHHHhCccCcEEEEEEeCCCCCCccccchhhHH-hCccCCCCCHHHHHHHHHHHhCccccCCcCCEEEECCCe
Confidence 2223344579999999999964322110000000 1122356789999999999997543 358999999875
|
| >1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=6.8e-19 Score=155.57 Aligned_cols=192 Identities=12% Similarity=0.094 Sum_probs=132.0
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh------cCCCcEEeecCCCCHHHHHHHhc-------C
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------G 162 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~~~v~~v~~D~~d~~~~~~~~~-------~ 162 (305)
..+++|+||||+|+||++++++|+++|++|++++|+++...+. .+.++.++.+|++|.+++.++++ +
T Consensus 9 ~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 88 (255)
T 1fmc_A 9 LDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGK 88 (255)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhcCC
Confidence 3468999999999999999999999999999999987653221 24568899999999999888876 8
Q ss_pred ccEEEECCcch-------------------------Hhhh----hhhcCCCEEEEEcccccccCCCCcccccchHHH--H
Q 021928 163 VRSIICPSEGF-------------------------ISNA----GSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--K 211 (305)
Q Consensus 163 ~d~Vi~~~~g~-------------------------~~~~----a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~--~ 211 (305)
+|+|||+++.. +..+ +++.+.++||++||..++.+..+...|..++.. .
T Consensus 89 ~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~ 168 (255)
T 1fmc_A 89 VDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASH 168 (255)
T ss_dssp CCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHHHHHHHHH
T ss_pred CCEEEECCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCCCCCcccHHHHHHHHH
Confidence 99999884310 1111 234578899999999888765555555443321 1
Q ss_pred HHHHHHHHHHhCCCCEEEEecCCcccCCC---CCcce--eeecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEEEEec
Q 021928 212 LAEQDESMLMASGIPYTIIRTGVLQNTPG---GKQGF--QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVN 284 (305)
Q Consensus 212 ~~~~aE~~l~~~gi~~tilRPg~l~~~~~---~~~~~--~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~v~~ 284 (305)
+.+.....+...+++++++|||++..... ..... .+........+++++|+|++++.++.++. ..+++|++.+
T Consensus 169 ~~~~~~~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~g 248 (255)
T 1fmc_A 169 LVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTPIRRLGQPQDIANAALFLCSPAASWVSGQILTVSG 248 (255)
T ss_dssp HHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCCHHHHHHHHHTCSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred HHHHHHHHhhhcCcEEEEEecccCcchhhhhccChHHHHHHHhcCCcccCCCHHHHHHHHHHHhCCccccCCCcEEEECC
Confidence 11122222345689999999999653210 00000 00112223457899999999999997543 3588999998
Q ss_pred CCc
Q 021928 285 GEE 287 (305)
Q Consensus 285 g~~ 287 (305)
|..
T Consensus 249 g~~ 251 (255)
T 1fmc_A 249 GGV 251 (255)
T ss_dssp TSC
T ss_pred cee
Confidence 763
|
| >2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=8.1e-19 Score=154.43 Aligned_cols=190 Identities=13% Similarity=0.135 Sum_probs=129.7
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh-------cCCCcEEeecCCCCHHHHHHHhc-------C
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------FGTYVESMAGDASNKKFLKTALR-------G 162 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~-------~~~~v~~v~~D~~d~~~~~~~~~-------~ 162 (305)
++++|+||||+|+||++++++|+++|++|+++.|++++..+. .+.++.++.+|++|.+++.++++ +
T Consensus 6 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 85 (248)
T 2pnf_A 6 QGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNLVDG 85 (248)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHSSC
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHhcCC
Confidence 458999999999999999999999999999999987653221 24568899999999999888876 7
Q ss_pred ccEEEECCcch------------------------------HhhhhhhcCCCEEEEEcccccccCCCCcccccchHH--H
Q 021928 163 VRSIICPSEGF------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA--R 210 (305)
Q Consensus 163 ~d~Vi~~~~g~------------------------------~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~--~ 210 (305)
+|+|||+++.. +...+++.+.++||++||..++.+..+...|...+. .
T Consensus 86 ~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~ 165 (248)
T 2pnf_A 86 IDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFTGNVGQVNYSTTKAGLI 165 (248)
T ss_dssp CSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHHHHH
T ss_pred CCEEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhcCCCCCCchHHHHHHHHH
Confidence 89999984310 011233467889999999876655444444543322 1
Q ss_pred HHHHHHHHHHHhCCCCEEEEecCCcccCCCCC-cc-e--eeecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEEEEec
Q 021928 211 KLAEQDESMLMASGIPYTIIRTGVLQNTPGGK-QG-F--QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVN 284 (305)
Q Consensus 211 ~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~-~~-~--~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~v~~ 284 (305)
.+.+.....+...++++++++||++....... .. . .+........+++++|+|++++.++..+. ..|++|++.+
T Consensus 166 ~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~g 245 (248)
T 2pnf_A 166 GFTKSLAKELAPRNVLVNAVAPGFIETDMTAVLSEEIKQKYKEQIPLGRFGSPEEVANVVLFLCSELASYITGEVIHVNG 245 (248)
T ss_dssp HHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSCHHHHHHHHHTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred HHHHHHHHHhcccCeEEEEEEeceecCchhhhccHHHHHHHHhcCCCCCccCHHHHHHHHHHHhCchhhcCCCcEEEeCC
Confidence 11122222344578999999999964322110 00 0 00111123457899999999999997542 4589999987
Q ss_pred CC
Q 021928 285 GE 286 (305)
Q Consensus 285 g~ 286 (305)
|.
T Consensus 246 g~ 247 (248)
T 2pnf_A 246 GM 247 (248)
T ss_dssp TC
T ss_pred Cc
Confidence 63
|
| >3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=8.2e-19 Score=156.49 Aligned_cols=190 Identities=13% Similarity=0.115 Sum_probs=131.3
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh---c----CCCcEEeecCCCCHHHHHHHhc-------C
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---F----GTYVESMAGDASNKKFLKTALR-------G 162 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~----~~~v~~v~~D~~d~~~~~~~~~-------~ 162 (305)
.+|+|+||||+|+||++++++|+++|++|++++|++++..+. + +.++.++.+|++|.+++.++++ +
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 85 (263)
T 3ai3_A 6 SGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSSFGG 85 (263)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHHHHSS
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 458999999999999999999999999999999997653321 1 4568899999999988887776 7
Q ss_pred ccEEEECCcch--------------------------H----hhhhhhcCCCEEEEEcccccccCCCCcccccchHHH--
Q 021928 163 VRSIICPSEGF--------------------------I----SNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR-- 210 (305)
Q Consensus 163 ~d~Vi~~~~g~--------------------------~----~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~-- 210 (305)
+|++||+++.. + ...+++.+.++||++||..++.+......|..++..
T Consensus 86 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~ 165 (263)
T 3ai3_A 86 ADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARGGGAIIHNASICAVQPLWYEPIYNVTKAALM 165 (263)
T ss_dssp CSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHHHH
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCCCCcchHHHHHHHHH
Confidence 89999884310 1 111234577899999999888765555555443321
Q ss_pred HHHHHHHHHHHhCCCCEEEEecCCcccCCCC-------------Ccce--eeecC-CCCCCccCHHHHHHHHHHHhhCCC
Q 021928 211 KLAEQDESMLMASGIPYTIIRTGVLQNTPGG-------------KQGF--QFEEG-CAANGSLSKEDAAFICVEALESIP 274 (305)
Q Consensus 211 ~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~-------------~~~~--~~~~~-~~~~~~Is~~DvA~~iv~~l~~~~ 274 (305)
.+.+.....+...++++++|+||++...... .... .+... .....+++++|+|++++.++..+.
T Consensus 166 ~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~ 245 (263)
T 3ai3_A 166 MFSKTLATEVIKDNIRVNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADEHAPIKRFASPEELANFFVFLCSERA 245 (263)
T ss_dssp HHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHTTTTTCCHHHHHHHHHHHHCTTCSCBCHHHHHHHHHHHTSTTC
T ss_pred HHHHHHHHHhhhcCcEEEEEecCcccCcchhhhhHhhhcccCCcHHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHcCccc
Confidence 1122222334457999999999996432100 0000 00001 222457899999999999997654
Q ss_pred --CCCcEEEEecCC
Q 021928 275 --QTGLIFEVVNGE 286 (305)
Q Consensus 275 --~~~~~~~v~~g~ 286 (305)
..|+.|++.+|.
T Consensus 246 ~~~~G~~~~vdgG~ 259 (263)
T 3ai3_A 246 TYSVGSAYFVDGGM 259 (263)
T ss_dssp TTCCSCEEEESTTC
T ss_pred cCCCCcEEEECCCc
Confidence 358999999875
|
| >1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=5e-19 Score=160.65 Aligned_cols=205 Identities=12% Similarity=0.137 Sum_probs=135.8
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh-------cCCCcEEeecCCCCHHHHHHHhcC------
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------FGTYVESMAGDASNKKFLKTALRG------ 162 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~-------~~~~v~~v~~D~~d~~~~~~~~~~------ 162 (305)
..+++|+||||+|+||++++++|+++|++|++++|++++..+. .+.++.++.+|++|.+++.++++.
T Consensus 24 l~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 103 (302)
T 1w6u_A 24 FQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAG 103 (302)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHHHcC
Confidence 3458999999999999999999999999999999997653221 145789999999999888877754
Q ss_pred -ccEEEECCcc--------h------------------Hhhh----hh-hcCCCEEEEEcccccccCCCCcccccchHHH
Q 021928 163 -VRSIICPSEG--------F------------------ISNA----GS-LKGVQHVILLSQLSVYRGSGGIQALMKGNAR 210 (305)
Q Consensus 163 -~d~Vi~~~~g--------~------------------~~~~----a~-~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~ 210 (305)
+|+|||+++. . +..+ .. +.+..+||++||..++.+..+...|..++..
T Consensus 104 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a 183 (302)
T 1w6u_A 104 HPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSASAKAG 183 (302)
T ss_dssp SCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCTTCHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEcccccccCCCCcchhHHHHHH
Confidence 5999998431 0 1111 11 3456799999999887665555555443321
Q ss_pred --HHHHHHHHHHHhCCCCEEEEecCCcccC-CC-C--Ccce---eeecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcE
Q 021928 211 --KLAEQDESMLMASGIPYTIIRTGVLQNT-PG-G--KQGF---QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLI 279 (305)
Q Consensus 211 --~~~~~aE~~l~~~gi~~tilRPg~l~~~-~~-~--~~~~---~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~ 279 (305)
.+.+.....+...+++++++|||++... .. . .... .+........+++++|+|++++.++..+. ..|+.
T Consensus 184 ~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dva~~~~~l~~~~~~~~~G~~ 263 (302)
T 1w6u_A 184 VEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPCGRLGTVEELANLAAFLCSDYASWINGAV 263 (302)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHHHHHHHTTCTTSSCBCHHHHHHHHHHHTSGGGTTCCSCE
T ss_pred HHHHHHHHHHHhhhcCcEEEEEeeccCCCcchhhhcccchhhHHHHHhcCCcCCCCCHHHHHHHHHHHcCCcccccCCCE
Confidence 1111122223447999999999997432 11 1 0000 01111222456899999999999997543 36899
Q ss_pred EEEecCCc-CHHHHHHHHHHhh
Q 021928 280 FEVVNGEE-KVSDWKKCFSRLM 300 (305)
Q Consensus 280 ~~v~~g~~-s~~d~~~~~~~l~ 300 (305)
|++.+|.. ++.++.+.+.++.
T Consensus 264 ~~v~gg~~~~~~~~~~~~~~~~ 285 (302)
T 1w6u_A 264 IKFDGGEEVLISGEFNDLRKVT 285 (302)
T ss_dssp EEESTTHHHHHHSTTGGGGGCC
T ss_pred EEECCCeeeccCCccccchhhc
Confidence 99998863 5555555544443
|
| >2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.79 E-value=2.7e-18 Score=150.18 Aligned_cols=171 Identities=18% Similarity=0.121 Sum_probs=115.5
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcC--CCcEEeecCCCCHHHHHHHhc-------CccEEE
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG--TYVESMAGDASNKKFLKTALR-------GVRSII 167 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~--~~v~~v~~D~~d~~~~~~~~~-------~~d~Vi 167 (305)
++++|+||||+|+||++++++|+++|++|++++|++++..+... .++.++.+|++|.+++.++++ ++|+||
T Consensus 4 ~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li 83 (234)
T 2ehd_A 4 MKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELEGALPLPGDVREEGDWARAVAAMEEAFGELSALV 83 (234)
T ss_dssp CCCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhhceEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 46899999999999999999999999999999998765432211 268899999999988877665 689999
Q ss_pred ECCcc------------------------------hHhhhhhhcCCCEEEEEcccccccCCCCcccccchHH--HHHHHH
Q 021928 168 CPSEG------------------------------FISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA--RKLAEQ 215 (305)
Q Consensus 168 ~~~~g------------------------------~~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~--~~~~~~ 215 (305)
|+++. .+...+++.+.++||++||..++.+..+...|...+. ..+.+.
T Consensus 84 ~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~ 163 (234)
T 2ehd_A 84 NNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRGGGTIVNVGSLAGKNPFKGGAAYNASKFGLLGLAGA 163 (234)
T ss_dssp ECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHH
T ss_pred ECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEECCchhcCCCCCCchhhHHHHHHHHHHHH
Confidence 88431 0112234567889999999988776555555544332 111222
Q ss_pred HHHHHHhCCCCEEEEecCCcccCCCCCcceeeecCCCCCCccCHHHHHHHHHHHhhCCC
Q 021928 216 DESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIP 274 (305)
Q Consensus 216 aE~~l~~~gi~~tilRPg~l~~~~~~~~~~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~ 274 (305)
....+...++++++++||++......... .. ..+++++|+|++++.++.++.
T Consensus 164 la~e~~~~gi~v~~v~Pg~v~t~~~~~~~------~~-~~~~~~~dvA~~~~~l~~~~~ 215 (234)
T 2ehd_A 164 AMLDLREANVRVVNVLPGSVDTGFAGNTP------GQ-AWKLKPEDVAQAVLFALEMPG 215 (234)
T ss_dssp HHHHHGGGTEEEEEEECC-----------------------CCHHHHHHHHHHHHHSCC
T ss_pred HHHHHhhcCcEEEEEEeCCCcCCcccccc------cc-cCCCCHHHHHHHHHHHhCCCc
Confidence 22334567999999999996533221110 00 125899999999999998765
|
| >4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A | Back alignment and structure |
|---|
Probab=99.79 E-value=2.2e-18 Score=153.50 Aligned_cols=190 Identities=14% Similarity=0.129 Sum_probs=132.1
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh---hcCCCcEEeecCCCCHHHHHHHhc-------CccEE
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALR-------GVRSI 166 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~---~~~~~v~~v~~D~~d~~~~~~~~~-------~~d~V 166 (305)
.+|++|||||+|+||++++++|+++|++|++++|+.+...+ ..+..+.++.+|++|.+++.++++ ++|++
T Consensus 7 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~l 86 (259)
T 4e6p_A 7 EGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIGPAAYAVQMDVTRQDSIDAAIAATVEHAGGLDIL 86 (259)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHSSSCCEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCceEEEeeCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 45899999999999999999999999999999999766432 345578999999999998888776 78999
Q ss_pred EECCcc----h----------------------Hhhh----hhhcC-CCEEEEEcccccccCCCCcccccchHHH--HHH
Q 021928 167 ICPSEG----F----------------------ISNA----GSLKG-VQHVILLSQLSVYRGSGGIQALMKGNAR--KLA 213 (305)
Q Consensus 167 i~~~~g----~----------------------~~~~----a~~~g-v~~~V~iSS~~~~~~~~~~~~~~~~~~~--~~~ 213 (305)
||+++. . +..+ ..+.+ -.+||++||..++.+......|..++.. .+.
T Consensus 87 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~ 166 (259)
T 4e6p_A 87 VNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRRGEALVAIYCATKAAVISLT 166 (259)
T ss_dssp EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHH
T ss_pred EECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhccCCCCChHHHHHHHHHHHHH
Confidence 998431 0 1111 12222 4699999999888776666556544321 111
Q ss_pred HHHHHHHHhCCCCEEEEecCCcccCCC--------------CCc-ceeeecCCCCCCccCHHHHHHHHHHHhhCCC--CC
Q 021928 214 EQDESMLMASGIPYTIIRTGVLQNTPG--------------GKQ-GFQFEEGCAANGSLSKEDAAFICVEALESIP--QT 276 (305)
Q Consensus 214 ~~aE~~l~~~gi~~tilRPg~l~~~~~--------------~~~-~~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~ 276 (305)
+.....+...+++++.|+||++..... ... ...+....+...+.+++|+|++++.++.... ..
T Consensus 167 ~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v~~L~s~~~~~it 246 (259)
T 4e6p_A 167 QSAGLDLIKHRINVNAIAPGVVDGEHWDGVDALFARYENRPRGEKKRLVGEAVPFGRMGTAEDLTGMAIFLASAESDYIV 246 (259)
T ss_dssp HHHHHHHGGGTEEEEEEEECCBCSTTHHHHHHHHHHHHTCCTTHHHHHHHHHSTTSSCBCTHHHHHHHHHTTSGGGTTCC
T ss_pred HHHHHHhhhcCCEEEEEEECCCccchhhhhhhhhhhhccCChHHHHHHHhccCCCCCCcCHHHHHHHHHHHhCCccCCCC
Confidence 222233445799999999999653321 000 0001122233567899999999999986443 35
Q ss_pred CcEEEEecCC
Q 021928 277 GLIFEVVNGE 286 (305)
Q Consensus 277 ~~~~~v~~g~ 286 (305)
|++|+|.+|.
T Consensus 247 G~~i~vdgG~ 256 (259)
T 4e6p_A 247 SQTYNVDGGN 256 (259)
T ss_dssp SCEEEESTTS
T ss_pred CCEEEECcCh
Confidence 8999999875
|
| >3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.79 E-value=4.1e-18 Score=152.27 Aligned_cols=192 Identities=15% Similarity=0.133 Sum_probs=127.8
Q ss_pred CcCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhc-CCCcEEeecCCCCHHHHHHHhc-------CccE
Q 021928 94 FPEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF-GTYVESMAGDASNKKFLKTALR-------GVRS 165 (305)
Q Consensus 94 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-~~~v~~v~~D~~d~~~~~~~~~-------~~d~ 165 (305)
++..+|+||||||+|+||++++++|+++|++|++++|++++..+.. ..++.++.+|++|.+++.++++ .+|+
T Consensus 23 m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~ 102 (260)
T 3gem_A 23 MTLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQAGAVALYGDFSCETGIMAFIDLLKTQTSSLRA 102 (260)
T ss_dssp ----CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHHHHTCEEEECCTTSHHHHHHHHHHHHHHCSCCSE
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhcCCeEEECCCCCHHHHHHHHHHHHHhcCCCCE
Confidence 4455689999999999999999999999999999999986643322 1248899999999988887775 6899
Q ss_pred EEECCcch-------------------------H----hhhhhhcCCCEEEEEcccccccCCCCcccccchHHHH--HHH
Q 021928 166 IICPSEGF-------------------------I----SNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK--LAE 214 (305)
Q Consensus 166 Vi~~~~g~-------------------------~----~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~~--~~~ 214 (305)
+|++++.. + ....++.+..+||++||..++.+......|..++... +.+
T Consensus 103 lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~ 182 (260)
T 3gem_A 103 VVHNASEWLAETPGEEADNFTRMFSVHMLAPYLINLHCEPLLTASEVADIVHISDDVTRKGSSKHIAYCATKAGLESLTL 182 (260)
T ss_dssp EEECCCCCCCCCTTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGTCCSSCHHHHHHHHHHHHHHH
T ss_pred EEECCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCCCCcHhHHHHHHHHHHHHH
Confidence 99884310 0 1112345678999999998887766665665443211 111
Q ss_pred HHHHHHHhCCCCEEEEecCCcccCCCCCcce--eeecCCCCCCccCHHHHHHHHHHHhhCCCCCCcEEEEecCC
Q 021928 215 QDESMLMASGIPYTIIRTGVLQNTPGGKQGF--QFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVVNGE 286 (305)
Q Consensus 215 ~aE~~l~~~gi~~tilRPg~l~~~~~~~~~~--~~~~~~~~~~~Is~~DvA~~iv~~l~~~~~~~~~~~v~~g~ 286 (305)
.....+.. ++.++.|+||++.......... .+........+.+++|+|++++.+++.+...|++++|.+|.
T Consensus 183 ~la~e~~~-~Irvn~v~PG~v~t~~~~~~~~~~~~~~~~p~~r~~~~edva~~v~~L~~~~~itG~~i~vdGG~ 255 (260)
T 3gem_A 183 SFAARFAP-LVKVNGIAPALLMFQPKDDAAYRANALAKSALGIEPGAEVIYQSLRYLLDSTYVTGTTLTVNGGR 255 (260)
T ss_dssp HHHHHHTT-TCEEEEEEECTTCC---------------CCSCCCCCTHHHHHHHHHHHHCSSCCSCEEEESTTT
T ss_pred HHHHHHCC-CCEEEEEeecccccCCCCCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhhCCCCCCCEEEECCCc
Confidence 11122223 6999999999964332111100 01111122345678999999999997666789999999875
|
| >3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.79 E-value=3.6e-18 Score=152.53 Aligned_cols=188 Identities=14% Similarity=0.134 Sum_probs=128.6
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhc-------CccEEEE
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR-------GVRSIIC 168 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~-------~~d~Vi~ 168 (305)
..+|+||||||+|+||++++++|+++|++|++++|+.+... ...+.++.+|++|.+++.++++ ++|++|+
T Consensus 26 ~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~ 102 (260)
T 3un1_A 26 NQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSA---DPDIHTVAGDISKPETADRIVREGIERFGRIDSLVN 102 (260)
T ss_dssp TTCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCS---STTEEEEESCTTSHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhcc---cCceEEEEccCCCHHHHHHHHHHHHHHCCCCCEEEE
Confidence 34689999999999999999999999999999999875533 2368999999999998888776 7899998
Q ss_pred CCcc----h----------------------Hhhh----hhhcCCCEEEEEcccccccCCCC--cccccchHH--HHHHH
Q 021928 169 PSEG----F----------------------ISNA----GSLKGVQHVILLSQLSVYRGSGG--IQALMKGNA--RKLAE 214 (305)
Q Consensus 169 ~~~g----~----------------------~~~~----a~~~gv~~~V~iSS~~~~~~~~~--~~~~~~~~~--~~~~~ 214 (305)
+++. . +..+ .++.+..+||++||..++.+... ...|..++. ..+.+
T Consensus 103 nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~~Y~~sKaa~~~l~~ 182 (260)
T 3un1_A 103 NAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQGSGHIVSITTSLVDQPMVGMPSALASLTKGGLNAVTR 182 (260)
T ss_dssp CCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCTTTTSCBTTCCCHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechhhccCCCCCccHHHHHHHHHHHHHHH
Confidence 8431 0 1111 24567789999999877643222 233332221 11111
Q ss_pred HHHHHHHhCCCCEEEEecCCcccCCCCCcc-eeeecCCCCCCccCHHHHHHHHHHHhhCCCCCCcEEEEecCC
Q 021928 215 QDESMLMASGIPYTIIRTGVLQNTPGGKQG-FQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVVNGE 286 (305)
Q Consensus 215 ~aE~~l~~~gi~~tilRPg~l~~~~~~~~~-~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~~~~~~~~v~~g~ 286 (305)
.....+...+++++.|+||++......... ..+........+.+++|+|++++.+.+.....|+++++.+|.
T Consensus 183 ~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~p~~r~~~~~dva~av~~L~~~~~itG~~i~vdGG~ 255 (260)
T 3un1_A 183 SLAMEFSRSGVRVNAVSPGVIKTPMHPAETHSTLAGLHPVGRMGEIRDVVDAVLYLEHAGFITGEILHVDGGQ 255 (260)
T ss_dssp HHHHHTTTTTEEEEEEEECCBCCTTSCGGGHHHHHTTSTTSSCBCHHHHHHHHHHHHHCTTCCSCEEEESTTG
T ss_pred HHHHHhCcCCeEEEEEeecCCCCCCCCHHHHHHHhccCCCCCCcCHHHHHHHHHHhcccCCCCCcEEEECCCe
Confidence 111223346899999999996543321111 111122233557789999999999966565679999999875
|
| >1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=4.7e-18 Score=151.05 Aligned_cols=190 Identities=14% Similarity=0.074 Sum_probs=130.9
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh---cCCCcEEeecCCCCHHHHHHHhc-------CccEE
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALR-------GVRSI 166 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~~~~v~~v~~D~~d~~~~~~~~~-------~~d~V 166 (305)
.+|+|+||||+|+||++++++|+++|++|++++|++++..+. ++.++.++.+|++|.+++.++++ ++|++
T Consensus 4 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~l 83 (254)
T 1hdc_A 4 SGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDGL 83 (254)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 458999999999999999999999999999999997654322 23468889999999998887776 78999
Q ss_pred EECCcc----h--------------------------HhhhhhhcCCCEEEEEcccccccCCCCcccccchHHH--HHHH
Q 021928 167 ICPSEG----F--------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--KLAE 214 (305)
Q Consensus 167 i~~~~g----~--------------------------~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~--~~~~ 214 (305)
|++++. . +...+++.+.++||++||..++.+......|..++.. .+.+
T Consensus 84 v~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~ 163 (254)
T 1hdc_A 84 VNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGVRGLSK 163 (254)
T ss_dssp EECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHH
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCCCCchhHHHHHHHHHHHHH
Confidence 988431 0 1122345677899999999887665555555443321 1122
Q ss_pred HHHHHHHhCCCCEEEEecCCcccCCC----CCcceeeecCCCCCCcc-CHHHHHHHHHHHhhCCC--CCCcEEEEecCC
Q 021928 215 QDESMLMASGIPYTIIRTGVLQNTPG----GKQGFQFEEGCAANGSL-SKEDAAFICVEALESIP--QTGLIFEVVNGE 286 (305)
Q Consensus 215 ~aE~~l~~~gi~~tilRPg~l~~~~~----~~~~~~~~~~~~~~~~I-s~~DvA~~iv~~l~~~~--~~~~~~~v~~g~ 286 (305)
.....+...++++++|+||++..... ......+........+. +++|+|++++.++.++. ..|+.+++.+|.
T Consensus 164 ~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~p~~~~~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG~ 242 (254)
T 1hdc_A 164 LAAVELGTDRIRVNSVHPGMTYTPMTAETGIRQGEGNYPNTPMGRVGNEPGEIAGAVVKLLSDTSSYVTGAELAVDGGW 242 (254)
T ss_dssp HHHHHHGGGTEEEEEEEECSBCCHHHHHHTCCCSTTSCTTSTTSSCB-CHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred HHHHHhhhcCeEEEEEecccCcCccccccchhHHHHHHhcCCCCCCCCCHHHHHHHHHHHhCchhcCCCCCEEEECCCc
Confidence 22233455799999999999643210 00000000111123456 89999999999997543 468999999875
|
| >1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.78 E-value=2.7e-18 Score=153.86 Aligned_cols=192 Identities=16% Similarity=0.088 Sum_probs=130.2
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh-------hcCCCcEEeecCCCCHHHHHHHhc------
Q 021928 95 PEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME-------SFGTYVESMAGDASNKKFLKTALR------ 161 (305)
Q Consensus 95 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~-------~~~~~v~~v~~D~~d~~~~~~~~~------ 161 (305)
...+|+++||||+|+||++++++|+++|++|++++|++++..+ ..+.++.++.+|++|.+++.++++
T Consensus 18 ~l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 97 (267)
T 1vl8_A 18 DLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKF 97 (267)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 4456999999999999999999999999999999999765321 124568889999999988887765
Q ss_pred -CccEEEECCcc----h----------------------H----hhhhhhcCCCEEEEEcccc-cccCCCCcccccchHH
Q 021928 162 -GVRSIICPSEG----F----------------------I----SNAGSLKGVQHVILLSQLS-VYRGSGGIQALMKGNA 209 (305)
Q Consensus 162 -~~d~Vi~~~~g----~----------------------~----~~~a~~~gv~~~V~iSS~~-~~~~~~~~~~~~~~~~ 209 (305)
++|++|++++. . + ...+++.+.++||++||.. ...+......|..++.
T Consensus 98 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~Y~asK~ 177 (267)
T 1vl8_A 98 GKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMPNISAYAASKG 177 (267)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCCSSSCHHHHHHHH
T ss_pred CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCcchhccCCCCChhHHHHHH
Confidence 78999988431 0 0 1112445678999999987 5544444444544332
Q ss_pred --HHHHHHHHHHHHhCCCCEEEEecCCcccCCCCC----cce--eeecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcE
Q 021928 210 --RKLAEQDESMLMASGIPYTIIRTGVLQNTPGGK----QGF--QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLI 279 (305)
Q Consensus 210 --~~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~----~~~--~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~ 279 (305)
..+.+.....+...++++++|+||++....... ... .+........+++++|+|++++.++..+. ..|+.
T Consensus 178 a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~s~~~~~itG~~ 257 (267)
T 1vl8_A 178 GVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRIPLGRTGVPEDLKGVAVFLASEEAKYVTGQI 257 (267)
T ss_dssp HHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTCHHHHHHHHHTCTTSSCBCGGGGHHHHHHHHSGGGTTCCSCE
T ss_pred HHHHHHHHHHHHhcccCeEEEEEEeccCccccccccccChHHHHHHHhhCCCCCCcCHHHHHHHHHHHcCccccCCcCCe
Confidence 111222223344579999999999965432210 000 00011122457899999999999997543 46899
Q ss_pred EEEecCC
Q 021928 280 FEVVNGE 286 (305)
Q Consensus 280 ~~v~~g~ 286 (305)
+.+.+|.
T Consensus 258 i~vdGG~ 264 (267)
T 1vl8_A 258 IFVDGGW 264 (267)
T ss_dssp EEESTTG
T ss_pred EEECCCC
Confidence 9998774
|
| >2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.78 E-value=2.8e-18 Score=151.58 Aligned_cols=190 Identities=15% Similarity=0.161 Sum_probs=129.9
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEc-Ccchhhh------hcCCCcEEeecCCCCHHHHHHHhc-------C
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVK-DKRNAME------SFGTYVESMAGDASNKKFLKTALR-------G 162 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R-~~~~~~~------~~~~~v~~v~~D~~d~~~~~~~~~-------~ 162 (305)
.+|+++||||+|+||++++++|+++|++|+++.| ++++..+ ..+.++.++.+|++|.+++.++++ +
T Consensus 3 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 82 (246)
T 2uvd_A 3 KGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVFGQ 82 (246)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 3589999999999999999999999999999999 6544321 124568899999999988887776 7
Q ss_pred ccEEEECCcc----h--------------------------HhhhhhhcCCCEEEEEcccccccCCCCcccccchHH--H
Q 021928 163 VRSIICPSEG----F--------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA--R 210 (305)
Q Consensus 163 ~d~Vi~~~~g----~--------------------------~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~--~ 210 (305)
+|++||+++. . +...+++.+.++||++||..++.+.+....|..++. .
T Consensus 83 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~ 162 (246)
T 2uvd_A 83 VDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQRHGRIVNIASVVGVTGNPGQANYVAAKAGVI 162 (246)
T ss_dssp CCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTBHHHHHHHHHHH
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCHHhcCCCCCCchHHHHHHHHH
Confidence 8999988431 0 111233457789999999877665555555544332 1
Q ss_pred HHHHHHHHHHHhCCCCEEEEecCCcccCCCCC--cce--eeecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEEEEec
Q 021928 211 KLAEQDESMLMASGIPYTIIRTGVLQNTPGGK--QGF--QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVN 284 (305)
Q Consensus 211 ~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~--~~~--~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~v~~ 284 (305)
.+.+.....+...+++++.|+||++....... ... .+........+++++|+|++++.++..+. ..|+.+++.+
T Consensus 163 ~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~~~~tG~~~~vdg 242 (246)
T 2uvd_A 163 GLTKTSAKELASRNITVNAIAPGFIATDMTDVLDENIKAEMLKLIPAAQFGEAQDIANAVTFFASDQSKYITGQTLNVDG 242 (246)
T ss_dssp HHHHHHHHHHGGGTEEEEEEEECSBGGGCSSCCCTTHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred HHHHHHHHHhhhcCeEEEEEEeccccCcchhhcCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCCCCCEEEECc
Confidence 12222233355679999999999964332111 000 00011122457899999999999996543 3689999987
Q ss_pred CC
Q 021928 285 GE 286 (305)
Q Consensus 285 g~ 286 (305)
|.
T Consensus 243 G~ 244 (246)
T 2uvd_A 243 GM 244 (246)
T ss_dssp TS
T ss_pred Cc
Confidence 74
|
| >2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=6.5e-18 Score=149.61 Aligned_cols=190 Identities=14% Similarity=0.047 Sum_probs=128.6
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCc-chhhh---hcCCCcEEeecCCCCHHHHHHHh-------cCccE
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK-RNAME---SFGTYVESMAGDASNKKFLKTAL-------RGVRS 165 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~-~~~~~---~~~~~v~~v~~D~~d~~~~~~~~-------~~~d~ 165 (305)
.+|+|+||||+|+||++++++|+++|++|++++|++ ++..+ ..+.++.++.+|++|.+++.+++ .++|+
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~ 85 (249)
T 2ew8_A 6 KDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCDI 85 (249)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHcCCCCE
Confidence 458999999999999999999999999999999987 54332 23456889999999998887765 47899
Q ss_pred EEECCcc----h--------------------------HhhhhhhcCCCEEEEEcccccccCCCCcccccchHH--HHHH
Q 021928 166 IICPSEG----F--------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA--RKLA 213 (305)
Q Consensus 166 Vi~~~~g----~--------------------------~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~--~~~~ 213 (305)
+|++++. . +...+++.+.++||++||..++.+......|..++. ..+.
T Consensus 86 lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~ 165 (249)
T 2ew8_A 86 LVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYISTKAANIGFT 165 (249)
T ss_dssp EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCSSCHHHHHHHHHHHHHH
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCCCCchhHHHHHHHHHHHH
Confidence 9988431 0 111134566789999999988876655555554332 1122
Q ss_pred HHHHHHHHhCCCCEEEEecCCcccCCCC-C-c-c--eeeec-CCCCCCccCHHHHHHHHHHHhhCCC--CCCcEEEEecC
Q 021928 214 EQDESMLMASGIPYTIIRTGVLQNTPGG-K-Q-G--FQFEE-GCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVNG 285 (305)
Q Consensus 214 ~~aE~~l~~~gi~~tilRPg~l~~~~~~-~-~-~--~~~~~-~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~v~~g 285 (305)
+.....+...+++++.|+||++...... . . . ..... ......+.+++|+|++++.++..+. ..|+.+++.+|
T Consensus 166 ~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~dva~~~~~l~s~~~~~~tG~~~~vdGG 245 (249)
T 2ew8_A 166 RALASDLGKDGITVNAIAPSLVRTATTEASALSAMFDVLPNMLQAIPRLQVPLDLTGAAAFLASDDASFITGQTLAVDGG 245 (249)
T ss_dssp HHHHHHHGGGTEEEEEEEECCC------------------CTTSSSCSCCCTHHHHHHHHHHTSGGGTTCCSCEEEESSS
T ss_pred HHHHHHHHhcCcEEEEEecCcCcCccchhccccchhhHHHHhhCccCCCCCHHHHHHHHHHHcCcccCCCCCcEEEECCC
Confidence 2222334557999999999996533211 0 0 0 00000 0122346789999999999997533 46899999877
Q ss_pred C
Q 021928 286 E 286 (305)
Q Consensus 286 ~ 286 (305)
.
T Consensus 246 ~ 246 (249)
T 2ew8_A 246 M 246 (249)
T ss_dssp C
T ss_pred c
Confidence 4
|
| >3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.78 E-value=2e-18 Score=152.51 Aligned_cols=192 Identities=14% Similarity=0.116 Sum_probs=132.2
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh---hcCCCcEEeecCCCCHHHHHHHhc---CccEEEE
Q 021928 95 PEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALR---GVRSIIC 168 (305)
Q Consensus 95 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~---~~~~~v~~v~~D~~d~~~~~~~~~---~~d~Vi~ 168 (305)
...+++||||||+|+||++++++|+++|++|++++|+.++..+ .+...+.++.+|++|.+++.++++ ++|++||
T Consensus 11 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~li~ 90 (249)
T 3f9i_A 11 DLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDNYTIEVCNLANKEECSNLISKTSNLDILVC 90 (249)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHTCSCCSEEEE
T ss_pred cCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhccCccEEEcCCCCHHHHHHHHHhcCCCCEEEE
Confidence 4456999999999999999999999999999999999866432 344678999999999999988886 6799998
Q ss_pred CCcch--------------------------H----hhhhhhcCCCEEEEEcccccccCCCCcccccchHHH--HHHHHH
Q 021928 169 PSEGF--------------------------I----SNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--KLAEQD 216 (305)
Q Consensus 169 ~~~g~--------------------------~----~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~--~~~~~a 216 (305)
+++.. + .....+.+..+||++||..++.+..+...|..+++. .+.+..
T Consensus 91 ~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~l 170 (249)
T 3f9i_A 91 NAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVGIAGNPGQANYCASKAGLIGMTKSL 170 (249)
T ss_dssp CCC-------------CHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCC--CCSCSHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEccHHhccCCCCCchhHHHHHHHHHHHHHH
Confidence 84310 1 111234566799999999888776666566544321 112222
Q ss_pred HHHHHhCCCCEEEEecCCcccCCCCC-cc---eeeecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEEEEecCC
Q 021928 217 ESMLMASGIPYTIIRTGVLQNTPGGK-QG---FQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVNGE 286 (305)
Q Consensus 217 E~~l~~~gi~~tilRPg~l~~~~~~~-~~---~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~v~~g~ 286 (305)
...+...++.++.++||++....... .. ..+........+.+++|+|++++.++.++. ..|+.+++.+|.
T Consensus 171 a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~tG~~~~vdgG~ 246 (249)
T 3f9i_A 171 SYEVATRGITVNAVAPGFIKSDMTDKLNEKQREAIVQKIPLGTYGIPEDVAYAVAFLASNNASYITGQTLHVNGGM 246 (249)
T ss_dssp HHHHGGGTEEEEEEEECCBC------CCHHHHHHHHHHCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred HHHHHHcCcEEEEEecCccccCcccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCCccCCccCcEEEECCCE
Confidence 23344579999999999965432211 00 001112233567889999999999997644 368999999875
|
| >3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} | Back alignment and structure |
|---|
Probab=99.78 E-value=4.8e-18 Score=150.65 Aligned_cols=190 Identities=16% Similarity=0.119 Sum_probs=128.1
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh------hcCCCcEEeecCCCCHHHHHHHhc-------Cc
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTALR-------GV 163 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~------~~~~~v~~v~~D~~d~~~~~~~~~-------~~ 163 (305)
.+++|+||||+|+||++++++|+++|++|++++|++++..+ ..+.++.++.+|++|.+++.++++ ++
T Consensus 12 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 91 (260)
T 3awd_A 12 DNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQEGRV 91 (260)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 45899999999999999999999999999999998765322 124568999999999998888775 78
Q ss_pred cEEEECCc--c---h----------------------Hhhh----hhhcCCCEEEEEcccccccCCCCc--ccccchHHH
Q 021928 164 RSIICPSE--G---F----------------------ISNA----GSLKGVQHVILLSQLSVYRGSGGI--QALMKGNAR 210 (305)
Q Consensus 164 d~Vi~~~~--g---~----------------------~~~~----a~~~gv~~~V~iSS~~~~~~~~~~--~~~~~~~~~ 210 (305)
|+|||+++ . . +..+ .++.+..+||++||..++.+.... ..|..++..
T Consensus 92 d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~Y~~sK~a 171 (260)
T 3awd_A 92 DILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIVNRPQQQAAYNASKAG 171 (260)
T ss_dssp CEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSSCCHHHHHHHHH
T ss_pred CEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEecchhcccCCCCCccccHHHHHH
Confidence 99998833 1 0 0111 223567899999998776544333 344332221
Q ss_pred --HHHHHHHHHHHhCCCCEEEEecCCcccCCCC-C---cce--eeecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEE
Q 021928 211 --KLAEQDESMLMASGIPYTIIRTGVLQNTPGG-K---QGF--QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIF 280 (305)
Q Consensus 211 --~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~-~---~~~--~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~ 280 (305)
.+.+.....+...++++++||||++...... . ... .+........+++++|+|++++.++..+. ..++.|
T Consensus 172 ~~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~ 251 (260)
T 3awd_A 172 VHQYIRSLAAEWAPHGIRANAVAPTYIETTLTRFGMEKPELYDAWIAGTPMGRVGQPDEVASVVQFLASDAASLMTGAIV 251 (260)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTHHHHTCHHHHHHHHHTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred HHHHHHHHHHHhhhcCeEEEEEEeeeeccchhhcccCChHHHHHHHhcCCcCCCCCHHHHHHHHHHHhCchhccCCCcEE
Confidence 1111112223347999999999996543321 0 000 00011222457899999999999997533 468899
Q ss_pred EEecCC
Q 021928 281 EVVNGE 286 (305)
Q Consensus 281 ~v~~g~ 286 (305)
++.+|.
T Consensus 252 ~v~gg~ 257 (260)
T 3awd_A 252 NVDAGF 257 (260)
T ss_dssp EESTTT
T ss_pred EECCce
Confidence 999874
|
| >2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} | Back alignment and structure |
|---|
Probab=99.78 E-value=9.3e-19 Score=154.22 Aligned_cols=176 Identities=9% Similarity=0.057 Sum_probs=120.9
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhc----CccEEEECCcch
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR----GVRSIICPSEGF 173 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~----~~d~Vi~~~~g~ 173 (305)
||+||||||+|+||++++++|+++|++|++++|++++... .+.+|+.|.+++.++++ ++|+|||+++..
T Consensus 1 Mk~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-------~~~~D~~~~~~~~~~~~~~~~~~d~vi~~Ag~~ 73 (255)
T 2dkn_A 1 MSVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEA-------DLSTPGGRETAVAAVLDRCGGVLDGLVCCAGVG 73 (255)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC-------CTTSHHHHHHHHHHHHHHHTTCCSEEEECCCCC
T ss_pred CcEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHccc-------cccCCcccHHHHHHHHHHcCCCccEEEECCCCC
Confidence 4689999999999999999999999999999998765321 26789999998888886 899999984310
Q ss_pred -------------------Hhhh----hhhcCCCEEEEEcccccccCC--------------------------CCcccc
Q 021928 174 -------------------ISNA----GSLKGVQHVILLSQLSVYRGS--------------------------GGIQAL 204 (305)
Q Consensus 174 -------------------~~~~----a~~~gv~~~V~iSS~~~~~~~--------------------------~~~~~~ 204 (305)
+.++ +++.+.++||++||..++.+. .+...|
T Consensus 74 ~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y 153 (255)
T 2dkn_A 74 VTAANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPGAAELPMVEAMLAGDEARAIELAEQQGQTHLAY 153 (255)
T ss_dssp TTSSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSTTGGGCHHHHHHHHTCHHHHHHHHHHHCCHHHHH
T ss_pred CcchhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEeccccccccccccchhhhhcccchhhhhhhccccCCcchhH
Confidence 1222 233467899999999887643 111122
Q ss_pred cchHHHHHHHHHHHHH-------HhCCCCEEEEecCCcccCCC-------CCcceeee-cCCCCCCccCHHHHHHHHHHH
Q 021928 205 MKGNARKLAEQDESML-------MASGIPYTIIRTGVLQNTPG-------GKQGFQFE-EGCAANGSLSKEDAAFICVEA 269 (305)
Q Consensus 205 ~~~~~~~~~~~aE~~l-------~~~gi~~tilRPg~l~~~~~-------~~~~~~~~-~~~~~~~~Is~~DvA~~iv~~ 269 (305)
.. .|...|.+. ...+++++++|||++..... ........ .+ ....+++++|+|++++.+
T Consensus 154 ~~-----sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~dva~~~~~l 227 (255)
T 2dkn_A 154 AG-----SKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPLLQASKADPRYGESTRRFVA-PLGRGSEPREVAEAIAFL 227 (255)
T ss_dssp HH-----HHHHHHHHHHHTHHHHHHTTCEEEEEEECCBCSHHHHHHHHCTTTHHHHHSCCC-TTSSCBCHHHHHHHHHHH
T ss_pred HH-----HHHHHHHHHHHHHHHHhhcCcEEEEEcCCcccchhhhhcccchhhHHHHHHHHH-HhcCCCCHHHHHHHHHHH
Confidence 21 122233322 33699999999998643210 00000000 01 334689999999999999
Q ss_pred hhCC--CCCCcEEEEecCC
Q 021928 270 LESI--PQTGLIFEVVNGE 286 (305)
Q Consensus 270 l~~~--~~~~~~~~v~~g~ 286 (305)
+.++ ...++.|++.+|.
T Consensus 228 ~~~~~~~~~G~~~~v~gg~ 246 (255)
T 2dkn_A 228 LGPQASFIHGSVLFVDGGM 246 (255)
T ss_dssp HSGGGTTCCSCEEEESTTH
T ss_pred hCCCcccceeeEEEecCCe
Confidence 9865 3468999999875
|
| >3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=7.8e-18 Score=148.01 Aligned_cols=190 Identities=16% Similarity=0.113 Sum_probs=129.2
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhc--CCCcEEeecCCCCHHHHHHHhc---CccEEEECCc
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF--GTYVESMAGDASNKKFLKTALR---GVRSIICPSE 171 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~--~~~v~~v~~D~~d~~~~~~~~~---~~d~Vi~~~~ 171 (305)
++++|+||||+|+||++++++|+++|++|++++|++++..+.. ..+++++.+|++|.+++.++++ ++|+|||+++
T Consensus 6 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~Ag 85 (244)
T 3d3w_A 6 AGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALGSVGPVDLLVNNAA 85 (244)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCCEEEECCC
T ss_pred CCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCCCEEEEeCCCHHHHHHHHHHcCCCCEEEECCc
Confidence 4589999999999999999999999999999999876543221 1257888999999999999886 4799998843
Q ss_pred c-----h---------------------Hhhh----hhhcC-CCEEEEEcccccccCCCCcccccchHHHH--HHHHHHH
Q 021928 172 G-----F---------------------ISNA----GSLKG-VQHVILLSQLSVYRGSGGIQALMKGNARK--LAEQDES 218 (305)
Q Consensus 172 g-----~---------------------~~~~----a~~~g-v~~~V~iSS~~~~~~~~~~~~~~~~~~~~--~~~~aE~ 218 (305)
. . +..+ .++.+ .++||++||..++.+..+...|..++... +.+....
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~ 165 (244)
T 3d3w_A 86 VALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKVMAL 165 (244)
T ss_dssp CCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhccCCCCCchHHHHHHHHHHHHHHHHH
Confidence 1 0 1111 22235 68999999998877655555554433211 1111112
Q ss_pred HHHhCCCCEEEEecCCcccCCCC----Ccce--eeecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEEEEecCC
Q 021928 219 MLMASGIPYTIIRTGVLQNTPGG----KQGF--QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVNGE 286 (305)
Q Consensus 219 ~l~~~gi~~tilRPg~l~~~~~~----~~~~--~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~v~~g~ 286 (305)
.+...++++++++||++...... .... .+........+++++|+|++++.++.++. ..|+.|++.+|.
T Consensus 166 e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~ 241 (244)
T 3d3w_A 166 ELGPHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPLGKFAEVEHVVNAILFLLSDRSGMTTGSTLPVEGGF 241 (244)
T ss_dssp HHGGGTEEEEEEEECCBTTTTHHHHSCSTTHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred HhcccCeEEEEEEeccccccchhhhccChHHHHHHHhhCCCCCCcCHHHHHHHHHHHcCccccCCCCCEEEECCCc
Confidence 23346899999999996533211 0000 01111223467899999999999997543 368899998774
|
| >1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.78 E-value=7.3e-18 Score=150.73 Aligned_cols=191 Identities=13% Similarity=0.127 Sum_probs=131.5
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh------c--CCCcEEeecCCCCHHHHHHHhc------
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------F--GTYVESMAGDASNKKFLKTALR------ 161 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~--~~~v~~v~~D~~d~~~~~~~~~------ 161 (305)
..+|+++||||+|+||++++++|+++|++|++++|++++..+. . +.++.++.+|++|.+++.++++
T Consensus 11 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 90 (267)
T 1iy8_A 11 FTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERF 90 (267)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 3468999999999999999999999999999999997653321 1 4568899999999988887775
Q ss_pred -CccEEEECCc-----ch--------------------------HhhhhhhcCCCEEEEEcccccccCCCCcccccchHH
Q 021928 162 -GVRSIICPSE-----GF--------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA 209 (305)
Q Consensus 162 -~~d~Vi~~~~-----g~--------------------------~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~ 209 (305)
++|++||+++ +. +...+++.+.++||++||..++.+......|..++.
T Consensus 91 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~ 170 (267)
T 1iy8_A 91 GRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAAAKH 170 (267)
T ss_dssp SCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBCSSBHHHHHHHH
T ss_pred CCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhccCCCCCccHHHHHH
Confidence 6899998833 10 111234457789999999988766555555544332
Q ss_pred --HHHHHHHHHHHHhCCCCEEEEecCCcccCCC-------CCcce-----eeecCCCCCCccCHHHHHHHHHHHhhCCC-
Q 021928 210 --RKLAEQDESMLMASGIPYTIIRTGVLQNTPG-------GKQGF-----QFEEGCAANGSLSKEDAAFICVEALESIP- 274 (305)
Q Consensus 210 --~~~~~~aE~~l~~~gi~~tilRPg~l~~~~~-------~~~~~-----~~~~~~~~~~~Is~~DvA~~iv~~l~~~~- 274 (305)
..+.+.....+...+++++.|+||++..... ..... .+........+.+++|+|++++.++.++.
T Consensus 171 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dvA~~v~~l~s~~~~ 250 (267)
T 1iy8_A 171 GVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEAPEIAAVVAFLLSDDAS 250 (267)
T ss_dssp HHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTCTTCSCBCHHHHHHHHHHHTSGGGT
T ss_pred HHHHHHHHHHHHHHhcCeEEEEEEeCCCcCcchhccccccChhhhhhHHHHHhccCCCCCCcCHHHHHHHHHHHcCcccc
Confidence 1122222233456799999999998642210 00000 01111122456799999999999997543
Q ss_pred -CCCcEEEEecCC
Q 021928 275 -QTGLIFEVVNGE 286 (305)
Q Consensus 275 -~~~~~~~v~~g~ 286 (305)
..|+.+.+.+|.
T Consensus 251 ~~tG~~i~vdGG~ 263 (267)
T 1iy8_A 251 YVNATVVPIDGGQ 263 (267)
T ss_dssp TCCSCEEEESTTT
T ss_pred CCCCCEEEECCCc
Confidence 468999998774
|
| >2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=1.2e-17 Score=148.49 Aligned_cols=191 Identities=13% Similarity=0.074 Sum_probs=132.4
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh---hcCCCcEEeecCCCCHHHHHHHhc-------CccE
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALR-------GVRS 165 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~---~~~~~v~~v~~D~~d~~~~~~~~~-------~~d~ 165 (305)
..+++|+||||+|+||++++++|+++|++|++++|+.++..+ .++.++.++.+|++|.+++.++++ ++|+
T Consensus 10 ~~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~ 89 (265)
T 2o23_A 10 VKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRVDV 89 (265)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCE
Confidence 346899999999999999999999999999999998765332 234578999999999999888876 8899
Q ss_pred EEECCcc--------------h------------------Hhhh----hhhc------CCCEEEEEcccccccCCCCccc
Q 021928 166 IICPSEG--------------F------------------ISNA----GSLK------GVQHVILLSQLSVYRGSGGIQA 203 (305)
Q Consensus 166 Vi~~~~g--------------~------------------~~~~----a~~~------gv~~~V~iSS~~~~~~~~~~~~ 203 (305)
|||+++. . +..+ .++. +..+||++||..++.+......
T Consensus 90 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~ 169 (265)
T 2o23_A 90 AVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAA 169 (265)
T ss_dssp EEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCTTCHH
T ss_pred EEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeCChhhcCCCCCCch
Confidence 9988331 0 1111 1122 6789999999988776555555
Q ss_pred ccchHH--HHHHHHHHHHHHhCCCCEEEEecCCcccCCCCC-ccee---eecCCCC-CCccCHHHHHHHHHHHhhCCCCC
Q 021928 204 LMKGNA--RKLAEQDESMLMASGIPYTIIRTGVLQNTPGGK-QGFQ---FEEGCAA-NGSLSKEDAAFICVEALESIPQT 276 (305)
Q Consensus 204 ~~~~~~--~~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~-~~~~---~~~~~~~-~~~Is~~DvA~~iv~~l~~~~~~ 276 (305)
|...+. ..+.+.....+...++++++|+||++....... .... +...... ..+++++|+|++++.++..+...
T Consensus 170 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~ 249 (265)
T 2o23_A 170 YSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLPEKVCNFLASQVPFPSRLGDPAEYAHLVQAIIENPFLN 249 (265)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC----------CHHHHTCSSSCSCBCHHHHHHHHHHHHHCTTCC
T ss_pred hHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccccCccccccCHHHHHHHHHcCCCcCCCCCHHHHHHHHHHHhhcCccC
Confidence 544332 112222233345679999999999965332111 0000 0011111 45789999999999999876678
Q ss_pred CcEEEEecCC
Q 021928 277 GLIFEVVNGE 286 (305)
Q Consensus 277 ~~~~~v~~g~ 286 (305)
|+.+.+.+|.
T Consensus 250 G~~i~vdgG~ 259 (265)
T 2o23_A 250 GEVIRLDGAI 259 (265)
T ss_dssp SCEEEESTTC
T ss_pred ceEEEECCCE
Confidence 8999998774
|
| >3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.78 E-value=3e-18 Score=152.85 Aligned_cols=190 Identities=12% Similarity=0.067 Sum_probs=130.1
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh---cCCCcEEeecCCCCHHHHHHHhc-------CccEE
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALR-------GVRSI 166 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~~~~v~~v~~D~~d~~~~~~~~~-------~~d~V 166 (305)
.+|+|+||||+|+||++++++|+++|++|++++|++++..+. +..++.++.+|++|.+++.++++ ++|+|
T Consensus 11 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~iD~l 90 (263)
T 3ak4_A 11 SGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGGFAVEVDVTKRASVDAAMQKAIDALGGFDLL 90 (263)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCTTCCEEEECCTTCHHHHHHHHHHHHHHHTCCCEE
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 458999999999999999999999999999999997654322 23368899999999999888776 78999
Q ss_pred EECCcc----h----------------------Hhh----hhhhcC-CCEEEEEcccccccCCCCcccccchHHH--HHH
Q 021928 167 ICPSEG----F----------------------ISN----AGSLKG-VQHVILLSQLSVYRGSGGIQALMKGNAR--KLA 213 (305)
Q Consensus 167 i~~~~g----~----------------------~~~----~a~~~g-v~~~V~iSS~~~~~~~~~~~~~~~~~~~--~~~ 213 (305)
||+++. . +.. ...+.+ ..+||++||..++.+.+....|..++.. .+.
T Consensus 91 v~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~ 170 (263)
T 3ak4_A 91 CANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVGAPLLAHYSASKFAVFGWT 170 (263)
T ss_dssp EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHH
T ss_pred EECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEecccccccCCCCchhHHHHHHHHHHHH
Confidence 988431 0 111 122334 6899999999887665555555443321 112
Q ss_pred HHHHHHHHhCCCCEEEEecCCcccCCCC--------C-----cce--eeecCCCCCCccCHHHHHHHHHHHhhCCC--CC
Q 021928 214 EQDESMLMASGIPYTIIRTGVLQNTPGG--------K-----QGF--QFEEGCAANGSLSKEDAAFICVEALESIP--QT 276 (305)
Q Consensus 214 ~~aE~~l~~~gi~~tilRPg~l~~~~~~--------~-----~~~--~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~ 276 (305)
+.....+...++++++|+||++...... . ... .+........+++++|+|++++.++.++. ..
T Consensus 171 ~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~v~~l~s~~~~~~t 250 (263)
T 3ak4_A 171 QALAREMAPKNIRVNCVCPGFVKTAMQEREIIWEAELRGMTPEAVRAEYVSLTPLGRIEEPEDVADVVVFLASDAARFMT 250 (263)
T ss_dssp HHHHHHHGGGTCEEEEEEECSBTTHHHHHHHHHHHHHHTSCHHHHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred HHHHHHHhHcCeEEEEEecccccChhhhhhccccccccccCcHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCC
Confidence 2222334457999999999996432110 0 000 01111223457899999999999997543 46
Q ss_pred CcEEEEecCC
Q 021928 277 GLIFEVVNGE 286 (305)
Q Consensus 277 ~~~~~v~~g~ 286 (305)
|+.|++.+|.
T Consensus 251 G~~~~vdgG~ 260 (263)
T 3ak4_A 251 GQGINVTGGV 260 (263)
T ss_dssp SCEEEESSSS
T ss_pred CCEEEECcCE
Confidence 8999998774
|
| >2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A | Back alignment and structure |
|---|
Probab=99.78 E-value=1.4e-18 Score=154.36 Aligned_cols=190 Identities=15% Similarity=0.091 Sum_probs=129.9
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchh-hhh---cCCCcEEeecCCCCHHHHHHHhc-------CccE
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-MES---FGTYVESMAGDASNKKFLKTALR-------GVRS 165 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~-~~~---~~~~v~~v~~D~~d~~~~~~~~~-------~~d~ 165 (305)
.+|+++||||+|+||++++++|+++|++|+++.|+++.. .+. .+.++.++.+|++|.+++.++++ ++|+
T Consensus 3 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~ 82 (255)
T 2q2v_A 3 KGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPAPALAEIARHGVKAVHHPADLSDVAQIEALFALAEREFGGVDI 82 (255)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHHHSSCSE
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 358999999999999999999999999999999987521 111 23468889999999999988887 7899
Q ss_pred EEECCc----ch--------------------------HhhhhhhcCCCEEEEEcccccccCCCCcccccchHHH--HHH
Q 021928 166 IICPSE----GF--------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--KLA 213 (305)
Q Consensus 166 Vi~~~~----g~--------------------------~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~--~~~ 213 (305)
+||+++ +. +...+++.+.++||++||..++.+......|..++.. .+.
T Consensus 83 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~ 162 (255)
T 2q2v_A 83 LVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARNWGRIINIASVHGLVGSTGKAAYVAAKHGVVGLT 162 (255)
T ss_dssp EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHH
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcCchhccCCCCchhHHHHHHHHHHHH
Confidence 998843 10 1112345677899999999887665555555443321 111
Q ss_pred HHHHHHHHhCCCCEEEEecCCcccCCCCC------c----c----eee-ecCCCCCCccCHHHHHHHHHHHhhCCC--CC
Q 021928 214 EQDESMLMASGIPYTIIRTGVLQNTPGGK------Q----G----FQF-EEGCAANGSLSKEDAAFICVEALESIP--QT 276 (305)
Q Consensus 214 ~~aE~~l~~~gi~~tilRPg~l~~~~~~~------~----~----~~~-~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~ 276 (305)
+.....+...++++++|+||++....... . . ..+ ........+++++|+|++++.++..+. ..
T Consensus 163 ~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~~~~t 242 (255)
T 2q2v_A 163 KVVGLETATSNVTCNAICPGWVLTPLVQKQIDDRAANGGDPLQAQHDLLAEKQPSLAFVTPEHLGELVLFLCSEAGSQVR 242 (255)
T ss_dssp HHHHHHTTTSSEEEEEEEESSBCCHHHHHHHHHHHHHTCCHHHHHHHHHTTTCTTCCCBCHHHHHHHHHHHTSGGGTTCC
T ss_pred HHHHHHhcccCcEEEEEeeCCCcCcchhhhcccccccccchHHHHHHHHhccCCCCCCcCHHHHHHHHHHHhCCccCCCC
Confidence 22222233478999999999964321100 0 0 001 112223457899999999999987543 35
Q ss_pred CcEEEEecCC
Q 021928 277 GLIFEVVNGE 286 (305)
Q Consensus 277 ~~~~~v~~g~ 286 (305)
|+.|++.+|.
T Consensus 243 G~~~~vdgG~ 252 (255)
T 2q2v_A 243 GAAWNVDGGW 252 (255)
T ss_dssp SCEEEESTTG
T ss_pred CCEEEECCCc
Confidence 8999998774
|
| >3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=99.78 E-value=1.4e-18 Score=156.64 Aligned_cols=208 Identities=16% Similarity=0.163 Sum_probs=142.8
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh------cCC---CcEEeecCCCCHHHHHHHhc-----
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGT---YVESMAGDASNKKFLKTALR----- 161 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~~---~v~~v~~D~~d~~~~~~~~~----- 161 (305)
..+|+|+||||+|+||++++++|+++|++|++++|++++..+. .+. .+.++.+|++|.+++.++++
T Consensus 9 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 88 (281)
T 3svt_A 9 FQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTAW 88 (281)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 3568999999999999999999999999999999997653221 122 68899999999988877765
Q ss_pred --CccEEEECCcc-----h----------------------Hhh----hhhhcCCCEEEEEcccccccCCCCcccccchH
Q 021928 162 --GVRSIICPSEG-----F----------------------ISN----AGSLKGVQHVILLSQLSVYRGSGGIQALMKGN 208 (305)
Q Consensus 162 --~~d~Vi~~~~g-----~----------------------~~~----~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~ 208 (305)
.+|++||+++. . +.. ...+.+-.+||++||..++.+......|..++
T Consensus 89 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK 168 (281)
T 3svt_A 89 HGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASNTHRWFGAYGVTK 168 (281)
T ss_dssp HSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCTTCTHHHHHH
T ss_pred cCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEeCHHHcCCCCCChhHHHHH
Confidence 67999988441 0 111 12334556999999998887766665665443
Q ss_pred HH--HHHHHHHHHHHhCCCCEEEEecCCcccCCCC----Ccc--eeeecCCCCCCccCHHHHHHHHHHHhhCCC--CCCc
Q 021928 209 AR--KLAEQDESMLMASGIPYTIIRTGVLQNTPGG----KQG--FQFEEGCAANGSLSKEDAAFICVEALESIP--QTGL 278 (305)
Q Consensus 209 ~~--~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~----~~~--~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~ 278 (305)
.. .+.+.....+...+++++.|+||++...... ... ..+........+.+++|+|++++.++.+.. ..|+
T Consensus 169 ~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~~~~l~s~~~~~itG~ 248 (281)
T 3svt_A 169 SAVDHLMQLAADELGASWVRVNSIRPGLIRTDLVAAITESAELSSDYAMCTPLPRQGEVEDVANMAMFLLSDAASFVTGQ 248 (281)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTCHHHHHHHHHHCSSSSCBCHHHHHHHHHHHHSGGGTTCCSC
T ss_pred HHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcccCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCcccCCCCCC
Confidence 21 1112222334457899999999996432210 000 001111223456789999999999997543 3689
Q ss_pred EEEEecCCc-C-HHHHHHHHHHhhhhc
Q 021928 279 IFEVVNGEE-K-VSDWKKCFSRLMEKT 303 (305)
Q Consensus 279 ~~~v~~g~~-s-~~d~~~~~~~l~~~~ 303 (305)
++++.+|.. . ..++.+.+.++.+++
T Consensus 249 ~~~vdgG~~~~~~~~~~~~~~~~~~~~ 275 (281)
T 3svt_A 249 VINVDGGQMLRRGPDFSAMLEPVFGRD 275 (281)
T ss_dssp EEEESTTGGGSCCCCCHHHHHHHHCTT
T ss_pred EEEeCCChhcccCCcchhccccccCCc
Confidence 999998864 3 667888888877654
|
| >2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.78 E-value=5.4e-18 Score=150.66 Aligned_cols=190 Identities=21% Similarity=0.185 Sum_probs=126.6
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh---c---C-------CCcEEeecCCCCHHHHHHHhcC-
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---F---G-------TYVESMAGDASNKKFLKTALRG- 162 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~---~-------~~v~~v~~D~~d~~~~~~~~~~- 162 (305)
++++|+||||+|+||++++++|+++|++|++++|++++..+. + + .++.++.+|++|.+++.++++.
T Consensus 6 ~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 85 (264)
T 2pd6_A 6 RSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLLEQV 85 (264)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHHHHH
Confidence 458999999999999999999999999999999997653321 1 1 4588999999999888877765
Q ss_pred ------c-cEEEECCcc----h----------------------Hhhh----hhhcC-CCEEEEEcccccccCCCCcccc
Q 021928 163 ------V-RSIICPSEG----F----------------------ISNA----GSLKG-VQHVILLSQLSVYRGSGGIQAL 204 (305)
Q Consensus 163 ------~-d~Vi~~~~g----~----------------------~~~~----a~~~g-v~~~V~iSS~~~~~~~~~~~~~ 204 (305)
+ |+|||+++. . +..+ ..+.+ .++||++||..++.+..+...|
T Consensus 86 ~~~~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y 165 (264)
T 2pd6_A 86 QACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGNVGQTNY 165 (264)
T ss_dssp HHHHSSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHCCTTBHHH
T ss_pred HHHhCCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhccCCCCChhh
Confidence 3 999988431 0 1111 22334 5799999998776655555555
Q ss_pred cchHHH--HHHHHHHHHHHhCCCCEEEEecCCcccCCCCC--ccee--eecCCCCCCccCHHHHHHHHHHHhhCCC--CC
Q 021928 205 MKGNAR--KLAEQDESMLMASGIPYTIIRTGVLQNTPGGK--QGFQ--FEEGCAANGSLSKEDAAFICVEALESIP--QT 276 (305)
Q Consensus 205 ~~~~~~--~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~--~~~~--~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~ 276 (305)
..++.. .+.+.....+...+++++++|||++....... .... +........+++++|+|++++.++..+. ..
T Consensus 166 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~ 245 (264)
T 2pd6_A 166 AASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQKVPQKVVDKITEMIPMGHLGDPEDVADVVAFLASEDSGYIT 245 (264)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSCC----------CTGGGCTTCSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred HHHHHHHHHHHHHHHHHhhhcCeEEEEEeeecccccchhhcCHHHHHHHHHhCCCCCCCCHHHHHHHHHHHcCCcccCCC
Confidence 443321 11122222344579999999999865432111 0000 0011122356799999999999997543 46
Q ss_pred CcEEEEecCC
Q 021928 277 GLIFEVVNGE 286 (305)
Q Consensus 277 ~~~~~v~~g~ 286 (305)
|+.+++.+|.
T Consensus 246 G~~~~v~gg~ 255 (264)
T 2pd6_A 246 GTSVEVTGGL 255 (264)
T ss_dssp SCEEEESTTC
T ss_pred CCEEEECCCc
Confidence 8999999875
|
| >1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.78 E-value=4.3e-18 Score=151.30 Aligned_cols=189 Identities=17% Similarity=0.126 Sum_probs=129.1
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh------cCCCcEEeecCCCCHHHHHHHhc-------Ccc
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GVR 164 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~~~v~~v~~D~~d~~~~~~~~~-------~~d 164 (305)
+|+++||||+|+||++++++|+++|++|++++|++++..+. .+.++.++.+|++|.+++.++++ ++|
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id 81 (256)
T 1geg_A 2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFD 81 (256)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCC
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence 58999999999999999999999999999999987653221 24468899999999998888776 789
Q ss_pred EEEECCcc----h--------------------------HhhhhhhcC-CCEEEEEcccccccCCCCcccccchHH--HH
Q 021928 165 SIICPSEG----F--------------------------ISNAGSLKG-VQHVILLSQLSVYRGSGGIQALMKGNA--RK 211 (305)
Q Consensus 165 ~Vi~~~~g----~--------------------------~~~~a~~~g-v~~~V~iSS~~~~~~~~~~~~~~~~~~--~~ 211 (305)
++||+++. . ....+++.+ ..+||++||..++.+......|..++. ..
T Consensus 82 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~ 161 (256)
T 1geg_A 82 VIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVRG 161 (256)
T ss_dssp EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHHHHHHHHHHH
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCCCCchhHHHHHHHHHH
Confidence 99988431 0 011123345 679999999887766555555544332 11
Q ss_pred HHHHHHHHHHhCCCCEEEEecCCcccCCC--------------CCcc-eeeecCCCCCCccCHHHHHHHHHHHhhCCC--
Q 021928 212 LAEQDESMLMASGIPYTIIRTGVLQNTPG--------------GKQG-FQFEEGCAANGSLSKEDAAFICVEALESIP-- 274 (305)
Q Consensus 212 ~~~~aE~~l~~~gi~~tilRPg~l~~~~~--------------~~~~-~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~-- 274 (305)
+.+.....+...+++++.|+||++..... .... ..+........+.+++|+|++++.++..+.
T Consensus 162 ~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~~~~~ 241 (256)
T 1geg_A 162 LTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACVSYLASPDSDY 241 (256)
T ss_dssp HHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGGTT
T ss_pred HHHHHHHHHHHcCeEEEEEEECCCccchhhhhhhhccccccCChHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccC
Confidence 22222233455799999999999643210 0000 001011122357899999999999997543
Q ss_pred CCCcEEEEecCC
Q 021928 275 QTGLIFEVVNGE 286 (305)
Q Consensus 275 ~~~~~~~v~~g~ 286 (305)
..|+.+.+.+|.
T Consensus 242 ~tG~~i~vdGG~ 253 (256)
T 1geg_A 242 MTGQSLLIDGGM 253 (256)
T ss_dssp CCSCEEEESSSS
T ss_pred CCCCEEEeCCCc
Confidence 468999998774
|
| >1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.78 E-value=3.8e-18 Score=149.89 Aligned_cols=190 Identities=15% Similarity=0.099 Sum_probs=129.6
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhc--CCCcEEeecCCCCHHHHHHHhc---CccEEEECCc
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF--GTYVESMAGDASNKKFLKTALR---GVRSIICPSE 171 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~--~~~v~~v~~D~~d~~~~~~~~~---~~d~Vi~~~~ 171 (305)
.+|+|+||||+|+||++++++|+++|++|++++|++++..+.. ..+++++.+|++|.+++.++++ .+|+|||+++
T Consensus 6 ~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~Ag 85 (244)
T 1cyd_A 6 SGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALGGIGPVDLLVNNAA 85 (244)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCSEEEECCC
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCCcEEecCCCHHHHHHHHHHcCCCCEEEECCc
Confidence 4589999999999999999999999999999999976543221 1357888999999999999887 4799999843
Q ss_pred ----ch----------------------Hhhh----hhhcC-CCEEEEEcccccccCCCCcccccchHHH--HHHHHHHH
Q 021928 172 ----GF----------------------ISNA----GSLKG-VQHVILLSQLSVYRGSGGIQALMKGNAR--KLAEQDES 218 (305)
Q Consensus 172 ----g~----------------------~~~~----a~~~g-v~~~V~iSS~~~~~~~~~~~~~~~~~~~--~~~~~aE~ 218 (305)
+. +.++ ..+.+ .++||++||..++.+......|..++.. .+.+....
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~ 165 (244)
T 1cyd_A 86 LVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTKGAMTMLTKAMAM 165 (244)
T ss_dssp CCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhcCCCCCcchhHHHHHHHHHHHHHHHH
Confidence 10 1111 22235 6899999999888765555555443321 11111122
Q ss_pred HHHhCCCCEEEEecCCcccCCC----CCcce--eeecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEEEEecCC
Q 021928 219 MLMASGIPYTIIRTGVLQNTPG----GKQGF--QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVNGE 286 (305)
Q Consensus 219 ~l~~~gi~~tilRPg~l~~~~~----~~~~~--~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~v~~g~ 286 (305)
.+...+++++++|||++..... ..... .+........+++++|+|++++.++.++. ..|+.+++.+|.
T Consensus 166 ~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~ 241 (244)
T 1cyd_A 166 ELGPHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKERHPLRKFAEVEDVVNSILFLLSDRSASTSGGGILVDAGY 241 (244)
T ss_dssp HHGGGTEEEEEEEECCBTTHHHHHHTCCHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGGGTTCCSSEEEESTTG
T ss_pred HhhhcCeEEEEEecCcccCccccccccCHHHHHHHHhcCCccCCCCHHHHHHHHHHHhCchhhcccCCEEEECCCc
Confidence 2334789999999999643211 00000 01112233568999999999999997653 357899988774
|
| >2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.78 E-value=6.2e-18 Score=152.67 Aligned_cols=191 Identities=16% Similarity=0.181 Sum_probs=128.8
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh------cCCCcEEeecCCCCHHHHHHHhc-------C
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------G 162 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~~~v~~v~~D~~d~~~~~~~~~-------~ 162 (305)
..+++|+||||+|+||++++++|+++|++|+++.|++++..+. .+.++.++.+|++|.++++++++ +
T Consensus 42 l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~ 121 (285)
T 2c07_A 42 GENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKN 121 (285)
T ss_dssp CSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSC
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 3468999999999999999999999999999998887553221 14468899999999998887773 6
Q ss_pred ccEEEECCcch--------------------------Hh----hhhhhcCCCEEEEEcccccccCCCCcccccchHHH--
Q 021928 163 VRSIICPSEGF--------------------------IS----NAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR-- 210 (305)
Q Consensus 163 ~d~Vi~~~~g~--------------------------~~----~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~-- 210 (305)
+|+||++++.. +. ..+++.+.++||++||..++.+......|..++..
T Consensus 122 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asK~a~~ 201 (285)
T 2c07_A 122 VDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQANYSSSKAGVI 201 (285)
T ss_dssp CCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHHHHH
T ss_pred CCEEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCCCCCchHHHHHHHHH
Confidence 89999884310 01 11234577899999999777655555555443321
Q ss_pred HHHHHHHHHHHhCCCCEEEEecCCcccCCCCC-c-ce--eeecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEEEEec
Q 021928 211 KLAEQDESMLMASGIPYTIIRTGVLQNTPGGK-Q-GF--QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVN 284 (305)
Q Consensus 211 ~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~-~-~~--~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~v~~ 284 (305)
.+.+.....+...++++++|+||++....... . .. .+........+++++|+|++++.++.++. ..|+.+++.+
T Consensus 202 ~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~~~~~~~~~G~~i~v~g 281 (285)
T 2c07_A 202 GFTKSLAKELASRNITVNAIAPGFISSDMTDKISEQIKKNIISNIPAGRMGTPEEVANLACFLSSDKSGYINGRVFVIDG 281 (285)
T ss_dssp HHHHHHHHHHGGGTEEEEEEEECSBCC-----CCHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred HHHHHHHHHHHHhCcEEEEEEeCcEecCchhhcCHHHHHHHHhhCCCCCCCCHHHHHHHHHHHhCCCcCCCCCCEEEeCC
Confidence 11222223344579999999999965332111 0 00 00011122357899999999999997643 3688999987
Q ss_pred CC
Q 021928 285 GE 286 (305)
Q Consensus 285 g~ 286 (305)
|.
T Consensus 282 G~ 283 (285)
T 2c07_A 282 GL 283 (285)
T ss_dssp TS
T ss_pred Cc
Confidence 64
|
| >1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A | Back alignment and structure |
|---|
Probab=99.78 E-value=3.5e-18 Score=150.77 Aligned_cols=190 Identities=13% Similarity=0.153 Sum_probs=129.1
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh---cC--CCcEEeecCCCCHHHHHHHhc-------Ccc
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FG--TYVESMAGDASNKKFLKTALR-------GVR 164 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~~--~~v~~v~~D~~d~~~~~~~~~-------~~d 164 (305)
.+++|+||||+|+||++++++|+++|++|++++|+++...+. .. .++.++.+|++|.+++.++++ .+|
T Consensus 5 ~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 84 (251)
T 1zk4_A 5 DGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPVS 84 (251)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSCC
T ss_pred CCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhccCceEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence 458999999999999999999999999999999987653321 11 468999999999988887775 489
Q ss_pred EEEECCcch------------------------------HhhhhhhcCC-CEEEEEcccccccCCCCcccccchHHH--H
Q 021928 165 SIICPSEGF------------------------------ISNAGSLKGV-QHVILLSQLSVYRGSGGIQALMKGNAR--K 211 (305)
Q Consensus 165 ~Vi~~~~g~------------------------------~~~~a~~~gv-~~~V~iSS~~~~~~~~~~~~~~~~~~~--~ 211 (305)
+|||+++.. +...+++.+. ++||++||..++.+......|..++.. .
T Consensus 85 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~ 164 (251)
T 1zk4_A 85 TLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAVRI 164 (251)
T ss_dssp EEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCTTCHHHHHHHHHHHH
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCCchhccCCCCCccchHHHHHHHH
Confidence 999884310 1122345566 799999999887765555555443321 1
Q ss_pred HHHHHHHHHH--hCCCCEEEEecCCcccCCC-C-Cccee---eecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEEEE
Q 021928 212 LAEQDESMLM--ASGIPYTIIRTGVLQNTPG-G-KQGFQ---FEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEV 282 (305)
Q Consensus 212 ~~~~aE~~l~--~~gi~~tilRPg~l~~~~~-~-~~~~~---~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~v 282 (305)
+.+.....+. ..+++++++|||++..... . ..... +........+++++|+|++++.++.++. ..|+.+++
T Consensus 165 ~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v 244 (251)
T 1zk4_A 165 MSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPGAEEAMSQRTKTPMGHIGEPNDIAYICVYLASNESKFATGSEFVV 244 (251)
T ss_dssp HHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTSTTHHHHHTSTTTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEE
T ss_pred HHHHHHHHhcccCCCeEEEEEeeCcCcchhhhhcCchhhhHHHhhcCCCCCCcCHHHHHHHHHHHcCcccccccCcEEEE
Confidence 1111111222 6789999999999643211 0 00000 1111122457899999999999997543 36899999
Q ss_pred ecCC
Q 021928 283 VNGE 286 (305)
Q Consensus 283 ~~g~ 286 (305)
.+|.
T Consensus 245 ~gG~ 248 (251)
T 1zk4_A 245 DGGY 248 (251)
T ss_dssp STTG
T ss_pred CCCc
Confidence 8774
|
| >3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.78 E-value=1.4e-17 Score=148.02 Aligned_cols=190 Identities=15% Similarity=0.113 Sum_probs=128.2
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh---cCCCcEEeecCCCCHHHHHHHhc-------CccEE
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALR-------GVRSI 166 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~~~~v~~v~~D~~d~~~~~~~~~-------~~d~V 166 (305)
.+|+++||||+|+||++++++|+++|++|++++|+++...+. .+.++.++.+|++|.+++.++++ ++|++
T Consensus 6 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~l 85 (257)
T 3tpc_A 6 KSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAELGAAVRFRNADVTNEADATAALAFAKQEFGHVHGL 85 (257)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC------------CEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 468999999999999999999999999999999997664332 34578999999999988887776 78999
Q ss_pred EECCcch------------------------------Hhhh----hhh------cCCCEEEEEcccccccCCCCcccccc
Q 021928 167 ICPSEGF------------------------------ISNA----GSL------KGVQHVILLSQLSVYRGSGGIQALMK 206 (305)
Q Consensus 167 i~~~~g~------------------------------~~~~----a~~------~gv~~~V~iSS~~~~~~~~~~~~~~~ 206 (305)
||+++.. +..+ .++ .+..+||++||..++.+......|..
T Consensus 86 v~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a 165 (257)
T 3tpc_A 86 VNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFDGQIGQAAYAA 165 (257)
T ss_dssp EECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCTTCHHHHH
T ss_pred EECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhccCCCCCcchHH
Confidence 9884310 0111 112 24568999999988877666666655
Q ss_pred hHHH--HHHHHHHHHHHhCCCCEEEEecCCcccCCCCC----cceeeecCCCC-CCccCHHHHHHHHHHHhhCCCCCCcE
Q 021928 207 GNAR--KLAEQDESMLMASGIPYTIIRTGVLQNTPGGK----QGFQFEEGCAA-NGSLSKEDAAFICVEALESIPQTGLI 279 (305)
Q Consensus 207 ~~~~--~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~----~~~~~~~~~~~-~~~Is~~DvA~~iv~~l~~~~~~~~~ 279 (305)
++.. .+.+.....+...+++++.++||++....... ....+...... ..+.+++|+|++++.++.+....|++
T Consensus 166 sKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~~r~~~~~dva~~v~~l~s~~~itG~~ 245 (257)
T 3tpc_A 166 SKGGVAALTLPAARELARFGIRVVTIAPGIFDTPMMAGMPQDVQDALAASVPFPPRLGRAEEYAALVKHICENTMLNGEV 245 (257)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSCC--------------CCSSSSCSCBCHHHHHHHHHHHHHCTTCCSCE
T ss_pred HHHHHHHHHHHHHHHHHHcCeEEEEEEeCCCCChhhccCCHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHcccCCcCCcE
Confidence 4321 11222223345579999999999965432111 00011111122 45778999999999999876668999
Q ss_pred EEEecCC
Q 021928 280 FEVVNGE 286 (305)
Q Consensus 280 ~~v~~g~ 286 (305)
+++.+|.
T Consensus 246 i~vdGG~ 252 (257)
T 3tpc_A 246 IRLDGAL 252 (257)
T ss_dssp EEESTTC
T ss_pred EEECCCc
Confidence 9999875
|
| >1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A | Back alignment and structure |
|---|
Probab=99.78 E-value=4.3e-18 Score=151.73 Aligned_cols=191 Identities=16% Similarity=0.119 Sum_probs=118.6
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh------cCCCcEEeecCCCCHHHHHHHh--------c
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTAL--------R 161 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~~~v~~v~~D~~d~~~~~~~~--------~ 161 (305)
..+|+|+||||+|+||++++++|+++|++|+++.|++++..+. .+.++.++.+|++|.+++.+++ .
T Consensus 12 l~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 91 (266)
T 1xq1_A 12 LKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGG 91 (266)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTT
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence 3468999999999999999999999999999999987653321 2346889999999998888777 5
Q ss_pred CccEEEECCcch--------------------------Hhhhh----hhcCCCEEEEEcccccccCCCCcccccchHHH-
Q 021928 162 GVRSIICPSEGF--------------------------ISNAG----SLKGVQHVILLSQLSVYRGSGGIQALMKGNAR- 210 (305)
Q Consensus 162 ~~d~Vi~~~~g~--------------------------~~~~a----~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~- 210 (305)
++|+|||+++.. +..++ ++.+.++||++||..++.+......|...+..
T Consensus 92 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~ 171 (266)
T 1xq1_A 92 KLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSATKGAL 171 (266)
T ss_dssp CCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC----------CCHHHHHHHHH
T ss_pred CCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhccCCCCCchHHHHHHHH
Confidence 689999874310 11122 45678899999999887655444455443321
Q ss_pred -HHHHHHHHHHHhCCCCEEEEecCCcccCCCCC---cce--eeecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEEEE
Q 021928 211 -KLAEQDESMLMASGIPYTIIRTGVLQNTPGGK---QGF--QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEV 282 (305)
Q Consensus 211 -~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~---~~~--~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~v 282 (305)
.+.+.....+...++++++||||++....... ... .+........+++++|+|++++.++..+. ..|+.+++
T Consensus 172 ~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v 251 (266)
T 1xq1_A 172 NQLARNLACEWASDGIRANAVAPAVIATPLAEAVYDDEFKKVVISRKPLGRFGEPEEVSSLVAFLCMPAASYITGQTICV 251 (266)
T ss_dssp HHHHHHHHHHHGGGTCEEEEEECCSCC-------------------------CCGGGGHHHHHHHTSGGGTTCCSCEEEC
T ss_pred HHHHHHHHHHHhHhCcEEEEEeeCCCccchhhhhcCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCccCcEEEE
Confidence 11122222334569999999999965332111 000 00011112346789999999999987543 36899999
Q ss_pred ecCC
Q 021928 283 VNGE 286 (305)
Q Consensus 283 ~~g~ 286 (305)
.+|.
T Consensus 252 ~gG~ 255 (266)
T 1xq1_A 252 DGGL 255 (266)
T ss_dssp CCCE
T ss_pred cCCc
Confidence 9874
|
| >3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.78 E-value=1.1e-17 Score=150.99 Aligned_cols=192 Identities=14% Similarity=0.060 Sum_probs=130.9
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCc-chhhh-------hcCCCcEEeecCCCCHHHHHHHhc-----
Q 021928 95 PEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK-RNAME-------SFGTYVESMAGDASNKKFLKTALR----- 161 (305)
Q Consensus 95 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~-~~~~~-------~~~~~v~~v~~D~~d~~~~~~~~~----- 161 (305)
+.++|++|||||+|+||++++++|+++|++|+++.|+. +...+ ..+..+.++.+|++|.+++.++++
T Consensus 22 ~l~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 101 (281)
T 3v2h_A 22 SMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVADR 101 (281)
T ss_dssp CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHHHH
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 34568999999999999999999999999999999943 33211 114578999999999988887775
Q ss_pred --CccEEEECCcc----h----------------------Hhh----hhhhcCCCEEEEEcccccccCCCCcccccchHH
Q 021928 162 --GVRSIICPSEG----F----------------------ISN----AGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA 209 (305)
Q Consensus 162 --~~d~Vi~~~~g----~----------------------~~~----~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~ 209 (305)
++|++|++++. . +.. ..++.+..+||++||..++.+......|..++.
T Consensus 102 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKa 181 (281)
T 3v2h_A 102 FGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGWGRIINIASAHGLVASPFKSAYVAAKH 181 (281)
T ss_dssp TSSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred CCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCcccccCCCCchHHHHHHH
Confidence 78999988431 0 111 124566789999999988876666556654432
Q ss_pred H--HHHHHHHHHHHhCCCCEEEEecCCcccCCCCC--------cc--------eeeecCCCCCCccCHHHHHHHHHHHhh
Q 021928 210 R--KLAEQDESMLMASGIPYTIIRTGVLQNTPGGK--------QG--------FQFEEGCAANGSLSKEDAAFICVEALE 271 (305)
Q Consensus 210 ~--~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~--------~~--------~~~~~~~~~~~~Is~~DvA~~iv~~l~ 271 (305)
. .+.+.....+...+++++.|+||++....... .. ..+........+++++|+|++++.++.
T Consensus 182 a~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~edvA~~v~~L~s 261 (281)
T 3v2h_A 182 GIMGLTKTVALEVAESGVTVNSICPGYVLTPLVEKQIPDQARTRGITEEQVINEVMLKGQPTKKFITVEQVASLALYLAG 261 (281)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECSBCC----------------------------CCTTCSCBCHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHhhhcCcEEEEEECCCCcCcchhhhcchhhhhcCCCHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHcC
Confidence 1 12222223345579999999999964322100 00 001122333567899999999999997
Q ss_pred CCC--CCCcEEEEecCC
Q 021928 272 SIP--QTGLIFEVVNGE 286 (305)
Q Consensus 272 ~~~--~~~~~~~v~~g~ 286 (305)
+.. ..|+++++.+|.
T Consensus 262 ~~a~~itG~~i~vdGG~ 278 (281)
T 3v2h_A 262 DDAAQITGTHVSMDGGW 278 (281)
T ss_dssp SGGGGCCSCEEEESTTG
T ss_pred CCcCCCCCcEEEECCCc
Confidence 654 468999998774
|
| >2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.78 E-value=1.7e-17 Score=147.02 Aligned_cols=186 Identities=11% Similarity=0.087 Sum_probs=123.4
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhc-------CccEEEEC
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR-------GVRSIICP 169 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~-------~~d~Vi~~ 169 (305)
.+|+++||||+|+||++++++|+++|++|++++|+++.. .. ++.++.+|++|.+++.++++ ++|++|++
T Consensus 6 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~--~~--~~~~~~~D~~d~~~~~~~~~~~~~~~g~id~lv~~ 81 (250)
T 2fwm_X 6 SGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQE--QY--PFATEVMDVADAAQVAQVCQRLLAETERLDALVNA 81 (250)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCSS--CC--SSEEEECCTTCHHHHHHHHHHHHHHCSCCCEEEEC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhhh--cC--CceEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 458999999999999999999999999999999987531 11 37889999999998888775 78999988
Q ss_pred Ccc----h----------------------Hhhh----hhhcCCCEEEEEcccccccCCCCcccccchHH--HHHHHHHH
Q 021928 170 SEG----F----------------------ISNA----GSLKGVQHVILLSQLSVYRGSGGIQALMKGNA--RKLAEQDE 217 (305)
Q Consensus 170 ~~g----~----------------------~~~~----a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~--~~~~~~aE 217 (305)
++. . +..+ +++.+.++||++||..++.+......|..++. ..+.+...
T Consensus 82 Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la 161 (250)
T 2fwm_X 82 AGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAHTPRIGMSAYGASKAALKSLALSVG 161 (250)
T ss_dssp CCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHH
T ss_pred CCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCCCCCchHHHHHHHHHHHHHHHH
Confidence 431 0 1111 24456789999999988776555555544332 11122222
Q ss_pred HHHHhCCCCEEEEecCCcccCCCCC----cc--e-eeec-------CCCCCCccCHHHHHHHHHHHhhCCC--CCCcEEE
Q 021928 218 SMLMASGIPYTIIRTGVLQNTPGGK----QG--F-QFEE-------GCAANGSLSKEDAAFICVEALESIP--QTGLIFE 281 (305)
Q Consensus 218 ~~l~~~gi~~tilRPg~l~~~~~~~----~~--~-~~~~-------~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~ 281 (305)
..+...++++++|+||++....... .. . .+.. ......+.+++|+|++++.++.++. ..|+.+.
T Consensus 162 ~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~s~~~~~~tG~~i~ 241 (250)
T 2fwm_X 162 LELAGSGVRCNVVSPGSTDTDMQRTLWVSDDAEEQRIRGFGEQFKLGIPLGKIARPQEIANTILFLASDLASHITLQDIV 241 (250)
T ss_dssp HHHGGGTCEEEEEEECCC------------------------------------CHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred HHhCccCCEEEEEECCcccCccccccccChhHHHHHHhhhhhcccccCCCCCCcCHHHHHHHHHHHhCccccCCCCCEEE
Confidence 3345579999999999964322110 00 0 0100 1112346789999999999997643 4689999
Q ss_pred EecCC
Q 021928 282 VVNGE 286 (305)
Q Consensus 282 v~~g~ 286 (305)
+.+|.
T Consensus 242 vdGG~ 246 (250)
T 2fwm_X 242 VDGGS 246 (250)
T ss_dssp ESTTT
T ss_pred ECCCc
Confidence 98774
|
| >2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} | Back alignment and structure |
|---|
Probab=99.78 E-value=3e-18 Score=150.82 Aligned_cols=190 Identities=13% Similarity=0.118 Sum_probs=121.1
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEE-EcCcchhhh------hcCCCcEEeecCCCCHHHHHHHhc-------C
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKAL-VKDKRNAME------SFGTYVESMAGDASNKKFLKTALR-------G 162 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~-~R~~~~~~~------~~~~~v~~v~~D~~d~~~~~~~~~-------~ 162 (305)
.+++|+||||+|+||++++++|+++|++|+++ .|+++...+ ..+.++.++.+|++|.+++.++++ +
T Consensus 4 ~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 83 (247)
T 2hq1_A 4 KGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDAFGR 83 (247)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 45899999999999999999999999999998 566544221 124568899999999998887776 7
Q ss_pred ccEEEECCcch------------------------------HhhhhhhcCCCEEEEEcccccccCCCCcccccchHH--H
Q 021928 163 VRSIICPSEGF------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA--R 210 (305)
Q Consensus 163 ~d~Vi~~~~g~------------------------------~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~--~ 210 (305)
+|+|||+++.. ....+++.+.++||++||..+..+......|..++. .
T Consensus 84 ~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~ 163 (247)
T 2hq1_A 84 IDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSGKIINITSIAGIIGNAGQANYAASKAGLI 163 (247)
T ss_dssp CCEEEECC---------------CHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECC---------CHHHHHHHHHHH
T ss_pred CCEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCCCCcHhHHHHHHHH
Confidence 89999884310 011123457789999999866544444444443322 1
Q ss_pred HHHHHHHHHHHhCCCCEEEEecCCcccCCC-C-Ccce--eeecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEEEEec
Q 021928 211 KLAEQDESMLMASGIPYTIIRTGVLQNTPG-G-KQGF--QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVN 284 (305)
Q Consensus 211 ~~~~~aE~~l~~~gi~~tilRPg~l~~~~~-~-~~~~--~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~v~~ 284 (305)
.+.+.....+...++++++++||++..... . .... .+........+++++|+|++++.++..+. ..++.|++.+
T Consensus 164 ~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~g 243 (247)
T 2hq1_A 164 GFTKSIAKEFAAKGIYCNAVAPGIIKTDMTDVLPDKVKEMYLNNIPLKRFGTPEEVANVVGFLASDDSNYITGQVINIDG 243 (247)
T ss_dssp HHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred HHHHHHHHHHHHcCcEEEEEEEEEEeccchhhcchHHHHHHHhhCCCCCCCCHHHHHHHHHHHcCcccccccCcEEEeCC
Confidence 111222223445689999999999643211 0 0000 01112223457899999999999987543 3688999987
Q ss_pred CC
Q 021928 285 GE 286 (305)
Q Consensus 285 g~ 286 (305)
|.
T Consensus 244 G~ 245 (247)
T 2hq1_A 244 GL 245 (247)
T ss_dssp TC
T ss_pred Cc
Confidence 64
|
| >2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=2.1e-18 Score=153.57 Aligned_cols=190 Identities=15% Similarity=0.127 Sum_probs=131.2
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh------cCCCcEEeecCCCCHHHHHHHhc-------Cc
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GV 163 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~~~v~~v~~D~~d~~~~~~~~~-------~~ 163 (305)
.+|+|+||||+|+||++++++|+++|++|++++|++++..+. .+.++.++.+|++|.+++.++++ ++
T Consensus 13 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i 92 (260)
T 2zat_A 13 ENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLHGGV 92 (260)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 458999999999999999999999999999999987653221 23468889999999988877765 78
Q ss_pred cEEEECCcc-----h----------------------Hhh----hhhhcCCCEEEEEcccccccCCCCcccccchHH--H
Q 021928 164 RSIICPSEG-----F----------------------ISN----AGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA--R 210 (305)
Q Consensus 164 d~Vi~~~~g-----~----------------------~~~----~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~--~ 210 (305)
|++||+++. . +.. .+++.+.++||++||..++.+......|..++. .
T Consensus 93 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~ 172 (260)
T 2zat_A 93 DILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHPFPNLGPYNVSKTALL 172 (260)
T ss_dssp CEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTBHHHHHHHHHHH
T ss_pred CEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEechhhcCCCCCchhHHHHHHHHH
Confidence 999988431 0 011 123457789999999988876555555544332 1
Q ss_pred HHHHHHHHHHHhCCCCEEEEecCCcccCCCC----Ccc--eeeecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEEEE
Q 021928 211 KLAEQDESMLMASGIPYTIIRTGVLQNTPGG----KQG--FQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEV 282 (305)
Q Consensus 211 ~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~----~~~--~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~v 282 (305)
.+.+.....+...++++++|+||++...... ... ..+........+.+++|+|++++.++.++. ..++++++
T Consensus 173 ~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~~~v 252 (260)
T 2zat_A 173 GLTKNLAVELAPRNIRVNCLAPGLIKTNFSQVLWMDKARKEYMKESLRIRRLGNPEDCAGIVSFLCSEDASYITGETVVV 252 (260)
T ss_dssp HHHHHHHHHHGGGTEEEEEEEECSBCSSTTHHHHSSHHHHHHHHHHHTCSSCBCGGGGHHHHHHHTSGGGTTCCSCEEEE
T ss_pred HHHHHHHHHhcccCeEEEEEEECcccCccchhcccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCcccCCccCCEEEE
Confidence 1122222334457999999999996543211 000 000011122457899999999999997543 36899999
Q ss_pred ecCC
Q 021928 283 VNGE 286 (305)
Q Consensus 283 ~~g~ 286 (305)
.+|.
T Consensus 253 dgG~ 256 (260)
T 2zat_A 253 GGGT 256 (260)
T ss_dssp STTC
T ss_pred CCCc
Confidence 9875
|
| >2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=3.8e-18 Score=150.81 Aligned_cols=191 Identities=13% Similarity=0.128 Sum_probs=128.0
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh---hcCCCc-EEeecCCCCHHHHHHHh------cCccE
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYV-ESMAGDASNKKFLKTAL------RGVRS 165 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~---~~~~~v-~~v~~D~~d~~~~~~~~------~~~d~ 165 (305)
..+++|+||||+|+||++++++|+++|++|++++|++++..+ ..+.++ .++.+|++|.+++++++ .++|+
T Consensus 9 ~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id~ 88 (254)
T 2wsb_A 9 LDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELGAAVAARIVADVTDAEAMTAAAAEAEAVAPVSI 88 (254)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEEECCTTCHHHHHHHHHHHHHHSCCCE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceeEEEEecCCHHHHHHHHHHHHhhCCCcE
Confidence 346899999999999999999999999999999999765332 223345 88999999998888776 47899
Q ss_pred EEECCcch------------------------------HhhhhhhcCCCEEEEEcccccccCCCCc--ccccchHHH--H
Q 021928 166 IICPSEGF------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGI--QALMKGNAR--K 211 (305)
Q Consensus 166 Vi~~~~g~------------------------------~~~~a~~~gv~~~V~iSS~~~~~~~~~~--~~~~~~~~~--~ 211 (305)
|||+++.. +...+++.+.++||++||..++.+.... ..|..++.. .
T Consensus 89 li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~Y~~sK~a~~~ 168 (254)
T 2wsb_A 89 LVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARGAGAIVNLGSMSGTIVNRPQFASSYMASKGAVHQ 168 (254)
T ss_dssp EEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSSCBHHHHHHHHHHHH
T ss_pred EEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEecchhccCCCCCcchHHHHHHHHHHH
Confidence 99984310 1112344678899999999877654333 344333221 1
Q ss_pred HHHHHHHHHHhCCCCEEEEecCCcccCCCC----Ccce--eeecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEEEEe
Q 021928 212 LAEQDESMLMASGIPYTIIRTGVLQNTPGG----KQGF--QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVV 283 (305)
Q Consensus 212 ~~~~aE~~l~~~gi~~tilRPg~l~~~~~~----~~~~--~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~v~ 283 (305)
+.+.....+...+++++++|||++...... .... .+........+++++|+|++++.++.++. ..|+.+++.
T Consensus 169 ~~~~~~~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~ 248 (254)
T 2wsb_A 169 LTRALAAEWAGRGVRVNALAPGYVATEMTLKMRERPELFETWLDMTPMGRCGEPSEIAAAALFLASPAASYVTGAILAVD 248 (254)
T ss_dssp HHHHHHHHHGGGTEEEEEEEECCBCSHHHHHHHTCHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred HHHHHHHHHhhcCeEEEEEEecccCchhhhccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCcccccccCCEEEEC
Confidence 111122223446999999999996432110 0000 00011122457899999999999996543 468999998
Q ss_pred cCC
Q 021928 284 NGE 286 (305)
Q Consensus 284 ~g~ 286 (305)
+|.
T Consensus 249 gG~ 251 (254)
T 2wsb_A 249 GGY 251 (254)
T ss_dssp TTG
T ss_pred CCE
Confidence 774
|
| >1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=7.1e-18 Score=150.23 Aligned_cols=189 Identities=15% Similarity=0.071 Sum_probs=127.9
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcch-hhhh---c----CCCcEEeecCCCCHHHHHHHhc-------C
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-AMES---F----GTYVESMAGDASNKKFLKTALR-------G 162 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~-~~~~---~----~~~v~~v~~D~~d~~~~~~~~~-------~ 162 (305)
+|+|+||||+|+||++++++|+++|++|+++.|+++. ..+. + +.++.++.+|++|.+++.++++ +
T Consensus 4 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 83 (260)
T 1x1t_A 4 GKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMGR 83 (260)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 5899999999999999999999999999999998765 3221 1 4568899999999988887775 6
Q ss_pred ccEEEECCcc----h----------------------H----hhhhhhcCCCEEEEEcccccccCCCCcccccchHHH--
Q 021928 163 VRSIICPSEG----F----------------------I----SNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR-- 210 (305)
Q Consensus 163 ~d~Vi~~~~g----~----------------------~----~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~-- 210 (305)
+|++||+++. . + ...+++.+.++||++||..++.+..+...|..++..
T Consensus 84 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~ 163 (260)
T 1x1t_A 84 IDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVV 163 (260)
T ss_dssp CSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHHHH
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECcHHhCcCCCCCchHHHHHHHHH
Confidence 8999988431 0 1 111234567899999999887665555555443321
Q ss_pred HHHHHHHHHHHhCCCCEEEEecCCcccCCCCCc-------------ce--ee-ecCCCCCCccCHHHHHHHHHHHhhCCC
Q 021928 211 KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQ-------------GF--QF-EEGCAANGSLSKEDAAFICVEALESIP 274 (305)
Q Consensus 211 ~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~~-------------~~--~~-~~~~~~~~~Is~~DvA~~iv~~l~~~~ 274 (305)
.+.+.....+...+++++.|+||++........ .. .+ ........+.+++|+|++++.++..+.
T Consensus 164 ~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dva~~~~~l~s~~~ 243 (260)
T 1x1t_A 164 GFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGGTAVFLASDAA 243 (260)
T ss_dssp HHHHHHHHHHTTTTEEEEEEEECCBCC------------------------CHHHHCTTCCCBCHHHHHHHHHHHHSGGG
T ss_pred HHHHHHHHHhccCCEEEEEEeecCccCchHHHhhhhhccccCCchHHHHHHHhhccCCCCCCcCHHHHHHHHHHHhChhh
Confidence 111222223445789999999999643321100 00 00 001122356799999999999997543
Q ss_pred --CCCcEEEEecCC
Q 021928 275 --QTGLIFEVVNGE 286 (305)
Q Consensus 275 --~~~~~~~v~~g~ 286 (305)
..|+.+++.+|.
T Consensus 244 ~~~tG~~~~vdgG~ 257 (260)
T 1x1t_A 244 AQITGTTVSVDGGW 257 (260)
T ss_dssp TTCCSCEEEESTTG
T ss_pred cCCCCCEEEECCCc
Confidence 468999998774
|
| >4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.77 E-value=9.7e-18 Score=151.17 Aligned_cols=193 Identities=15% Similarity=0.108 Sum_probs=134.9
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh---hcCCCcEEeecCCCCHHHHHHHhc-------Ccc
Q 021928 95 PEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALR-------GVR 164 (305)
Q Consensus 95 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~---~~~~~v~~v~~D~~d~~~~~~~~~-------~~d 164 (305)
+..+|+++||||+|+||++++++|+++|++|++++|+++...+ ..+.++.++.+|++|.++++++++ ++|
T Consensus 24 ~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD 103 (277)
T 4dqx_A 24 DLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIGSKAFGVRVDVSSAKDAESMVEKTTAKWGRVD 103 (277)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 3456899999999999999999999999999999999766432 245678999999999988887775 789
Q ss_pred EEEECCcch------------------------------HhhhhhhcCCCEEEEEcccccccCCCCcccccchHHH--HH
Q 021928 165 SIICPSEGF------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--KL 212 (305)
Q Consensus 165 ~Vi~~~~g~------------------------------~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~--~~ 212 (305)
++|++++.. ....+++.+..+||++||..++.+......|..++.. .+
T Consensus 104 ~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l 183 (277)
T 4dqx_A 104 VLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTATSAIADRTAYVASKGAISSL 183 (277)
T ss_dssp EEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHH
T ss_pred EEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECchhhCcCCCCChhHHHHHHHHHHH
Confidence 999884310 1112344566799999999888776666666554321 11
Q ss_pred HHHHHHHHHhCCCCEEEEecCCcccCC-C-----CCcc-ee---eecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEE
Q 021928 213 AEQDESMLMASGIPYTIIRTGVLQNTP-G-----GKQG-FQ---FEEGCAANGSLSKEDAAFICVEALESIP--QTGLIF 280 (305)
Q Consensus 213 ~~~aE~~l~~~gi~~tilRPg~l~~~~-~-----~~~~-~~---~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~ 280 (305)
.+.....+...+++++.|+||++.... . .... .. +........+.+++|+|++++.++.+.. ..|+++
T Consensus 184 ~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~~L~s~~~~~itG~~i 263 (277)
T 4dqx_A 184 TRAMAMDHAKEGIRVNAVAPGTIDSPYFTKIFAEAKDPAKLRSDFNARAVMDRMGTAEEIAEAMLFLASDRSRFATGSIL 263 (277)
T ss_dssp HHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHHTCSCHHHHHHHHHTTSTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred HHHHHHHhhhcCeEEEEEeeCcCcCchhhhhcccccchhHHHHHHHhcCcccCCcCHHHHHHHHHHHhCCccCCCcCCEE
Confidence 222223344579999999999964321 0 0000 00 1122233456789999999999997544 468999
Q ss_pred EEecCCc
Q 021928 281 EVVNGEE 287 (305)
Q Consensus 281 ~v~~g~~ 287 (305)
++.+|..
T Consensus 264 ~vdGG~~ 270 (277)
T 4dqx_A 264 TVDGGSS 270 (277)
T ss_dssp EESSSSS
T ss_pred EECCchh
Confidence 9998763
|
| >1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.77 E-value=9.7e-18 Score=148.23 Aligned_cols=189 Identities=16% Similarity=0.149 Sum_probs=128.5
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcC-CCcEEeecCCCCHHHHHHHhc-------CccEEEE
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG-TYVESMAGDASNKKFLKTALR-------GVRSIIC 168 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~-~~v~~v~~D~~d~~~~~~~~~-------~~d~Vi~ 168 (305)
.+|+++||||+|+||++++++|+++|++|+++.|++++..+... .++.++.+|++|.++++++++ .+|++|+
T Consensus 4 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lvn 83 (245)
T 1uls_A 4 KDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERGFAEALAHLGRLDGVVH 83 (245)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 35899999999999999999999999999999999766433221 137889999999988887765 4799998
Q ss_pred CCcc----h----------------------H----hhhhhhcCCCEEEEEcccccccCCCCcccccchHH--HHHHHHH
Q 021928 169 PSEG----F----------------------I----SNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA--RKLAEQD 216 (305)
Q Consensus 169 ~~~g----~----------------------~----~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~--~~~~~~a 216 (305)
+++- . + ...+++.+.++||++||.. ..+......|..++. ..+.+..
T Consensus 84 ~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~-~~~~~~~~~Y~asK~a~~~~~~~l 162 (245)
T 1uls_A 84 YAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRV-YLGNLGQANYAASMAGVVGLTRTL 162 (245)
T ss_dssp CCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGG-GGCCTTCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEccch-hcCCCCchhHHHHHHHHHHHHHHH
Confidence 8431 0 0 1112345678999999988 544444444544332 1122333
Q ss_pred HHHHHhCCCCEEEEecCCcccCCCCC-cc-e--eeecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEEEEecCC
Q 021928 217 ESMLMASGIPYTIIRTGVLQNTPGGK-QG-F--QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVNGE 286 (305)
Q Consensus 217 E~~l~~~gi~~tilRPg~l~~~~~~~-~~-~--~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~v~~g~ 286 (305)
...+...+++++.|+||++....... .. . .+........+++++|+|++++.++.++. ..|+.+.+.+|.
T Consensus 163 a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG~ 238 (245)
T 1uls_A 163 ALELGRWGIRVNTLAPGFIETRMTAKVPEKVREKAIAATPLGRAGKPLEVAYAALFLLSDESSFITGQVLFVDGGR 238 (245)
T ss_dssp HHHHGGGTEEEEEEEECSBCCTTTSSSCHHHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred HHHHhHhCeEEEEEEeCcCcCcchhhcCHHHHHHHHhhCCCCCCcCHHHHHHHHHHHhCchhcCCcCCEEEECCCc
Confidence 33455679999999999965432211 00 0 00011122347899999999999997543 468999998774
|
| >1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.77 E-value=5.2e-18 Score=151.43 Aligned_cols=190 Identities=14% Similarity=0.128 Sum_probs=126.1
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEc-Ccchhhh------hcCCCcEEeecCCCCHHHHHHHhc-------
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVK-DKRNAME------SFGTYVESMAGDASNKKFLKTALR------- 161 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R-~~~~~~~------~~~~~v~~v~~D~~d~~~~~~~~~------- 161 (305)
..+|+|+||||+|+||++++++|+++|++|++++| ++++..+ ..+.++.++.+|++|.+++.++++
T Consensus 19 ~~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 98 (274)
T 1ja9_A 19 LAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFG 98 (274)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 34689999999999999999999999999999999 5443221 124568899999999999888876
Q ss_pred CccEEEECCcch--------------------------Hhhhhhh---cCCCEEEEEcccccc-cCCCCcccccchHHH-
Q 021928 162 GVRSIICPSEGF--------------------------ISNAGSL---KGVQHVILLSQLSVY-RGSGGIQALMKGNAR- 210 (305)
Q Consensus 162 ~~d~Vi~~~~g~--------------------------~~~~a~~---~gv~~~V~iSS~~~~-~~~~~~~~~~~~~~~- 210 (305)
++|+|||+++.. +.+++.. .+ ++||++||..++ .+......|..++..
T Consensus 99 ~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~iv~~sS~~~~~~~~~~~~~Y~~sK~a~ 177 (274)
T 1ja9_A 99 GLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRG-GRIILTSSIAAVMTGIPNHALYAGSKAAV 177 (274)
T ss_dssp CEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEE-EEEEEECCGGGTCCSCCSCHHHHHHHHHH
T ss_pred CCCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhC-CEEEEEcChHhccCCCCCCchHHHHHHHH
Confidence 789999874310 1111111 23 699999999887 544444445433221
Q ss_pred -HHHHHHHHHHHhCCCCEEEEecCCcccCCCC------------C---cce--eeecCCCCCCccCHHHHHHHHHHHhhC
Q 021928 211 -KLAEQDESMLMASGIPYTIIRTGVLQNTPGG------------K---QGF--QFEEGCAANGSLSKEDAAFICVEALES 272 (305)
Q Consensus 211 -~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~------------~---~~~--~~~~~~~~~~~Is~~DvA~~iv~~l~~ 272 (305)
.+.+.....+...++.+++++||++...... . ... .+........+++++|+|++++.++.+
T Consensus 178 ~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~~~ 257 (274)
T 1ja9_A 178 EGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIGYPADIGRAVSALCQE 257 (274)
T ss_dssp HHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHSG
T ss_pred HHHHHHHHHHhhhcCeEEEEEeeCcccccchhcccccccccccccCchHHHHHHHHhcCCCCCccCHHHHHHHHHHHhCc
Confidence 1111111223346999999999986432100 0 000 011122335678999999999999976
Q ss_pred CC--CCCcEEEEecCC
Q 021928 273 IP--QTGLIFEVVNGE 286 (305)
Q Consensus 273 ~~--~~~~~~~v~~g~ 286 (305)
+. ..|++|++.+|.
T Consensus 258 ~~~~~~G~~~~v~gG~ 273 (274)
T 1ja9_A 258 ESEWINGQVIKLTGGG 273 (274)
T ss_dssp GGTTCCSCEEEESTTC
T ss_pred ccccccCcEEEecCCc
Confidence 43 368999998774
|
| >3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=99.77 E-value=7.5e-18 Score=149.84 Aligned_cols=191 Identities=13% Similarity=0.120 Sum_probs=131.8
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhc------CccEEEEC
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR------GVRSIICP 169 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~------~~d~Vi~~ 169 (305)
..+|++|||||+|+||++++++|+++|++|+++.|+.++..+..+..+.++.+|++|.+++.++++ .+|++|++
T Consensus 7 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~g~id~lv~n 86 (257)
T 3tl3_A 7 IRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDVVADLGDRARFAAADVTDEAAVASALDLAETMGTLRIVVNC 86 (257)
T ss_dssp ---CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHTCTTEEEEECCTTCHHHHHHHHHHHHHHSCEEEEEEC
T ss_pred ecCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhCCCCEEEEC
Confidence 346899999999999999999999999999999998776666667789999999999998887776 78999988
Q ss_pred Ccch------------------------------Hhhh----hhh--------cCCCEEEEEcccccccCCCCcccccch
Q 021928 170 SEGF------------------------------ISNA----GSL--------KGVQHVILLSQLSVYRGSGGIQALMKG 207 (305)
Q Consensus 170 ~~g~------------------------------~~~~----a~~--------~gv~~~V~iSS~~~~~~~~~~~~~~~~ 207 (305)
++.. +..+ ..+ .+-.+||++||..++.+......|..+
T Consensus 87 Ag~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as 166 (257)
T 3tl3_A 87 AGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDGQIGQAAYSAS 166 (257)
T ss_dssp GGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC--CCHHHHHHHHHH
T ss_pred CCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhhcCCCCCCccHHHH
Confidence 4410 0011 112 334589999999887665544455443
Q ss_pred HH--HHHHHHHHHHHHhCCCCEEEEecCCcccCCCCC-c-ce--eeecCCCC-CCccCHHHHHHHHHHHhhCCCCCCcEE
Q 021928 208 NA--RKLAEQDESMLMASGIPYTIIRTGVLQNTPGGK-Q-GF--QFEEGCAA-NGSLSKEDAAFICVEALESIPQTGLIF 280 (305)
Q Consensus 208 ~~--~~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~-~-~~--~~~~~~~~-~~~Is~~DvA~~iv~~l~~~~~~~~~~ 280 (305)
+. ..+.+.....+...++.++.|+||++....... . .. .+...... ..+.+++|+|++++.++.++...|+++
T Consensus 167 Kaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~r~~~p~dva~~v~~l~s~~~itG~~i 246 (257)
T 3tl3_A 167 KGGVVGMTLPIARDLASHRIRVMTIAPGLFDTPLLASLPEEARASLGKQVPHPSRLGNPDEYGALAVHIIENPMLNGEVI 246 (257)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTC---CHHHHHHHHHTSSSSCSCBCHHHHHHHHHHHHHCTTCCSCEE
T ss_pred HHHHHHHHHHHHHHhcccCcEEEEEEecCccChhhhhccHHHHHHHHhcCCCCCCccCHHHHHHHHHHHhcCCCCCCCEE
Confidence 32 112222223345679999999999965432211 0 00 00111122 457899999999999999866789999
Q ss_pred EEecCC
Q 021928 281 EVVNGE 286 (305)
Q Consensus 281 ~v~~g~ 286 (305)
.+.+|.
T Consensus 247 ~vdGG~ 252 (257)
T 3tl3_A 247 RLDGAI 252 (257)
T ss_dssp EESTTC
T ss_pred EECCCc
Confidence 999875
|
| >2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.77 E-value=6.8e-18 Score=150.11 Aligned_cols=187 Identities=14% Similarity=0.079 Sum_probs=127.2
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh---cCCCcEEeecCCCCHHHHHHHhc-------CccEE
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALR-------GVRSI 166 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~~~~v~~v~~D~~d~~~~~~~~~-------~~d~V 166 (305)
.+|+++||||+|+||++++++|+++|++|+++.|++++ .+. .. . .++.+|++|.++++++++ ++|++
T Consensus 5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~-~-~~~~~D~~~~~~~~~~~~~~~~~~g~iD~l 81 (256)
T 2d1y_A 5 AGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAIG-G-AFFQVDLEDERERVRFVEEAAYALGRVDVL 81 (256)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHHHT-C-EEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHhh-C-CEEEeeCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 45899999999999999999999999999999998765 221 22 3 789999999988877665 68999
Q ss_pred EECCcc----h----------------------H----hhhhhhcCCCEEEEEcccccccCCCCcccccchHHH--HHHH
Q 021928 167 ICPSEG----F----------------------I----SNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--KLAE 214 (305)
Q Consensus 167 i~~~~g----~----------------------~----~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~--~~~~ 214 (305)
||+++. . + ...+++.+.++||++||..++.+......|..++.. .+.+
T Consensus 82 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~ 161 (256)
T 2d1y_A 82 VNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQENAAYNASKGGLVNLTR 161 (256)
T ss_dssp EECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBCTTBHHHHHHHHHHHHHHH
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccccccCCCCCChhHHHHHHHHHHHHH
Confidence 988431 0 1 111234567899999999877655555555443321 1112
Q ss_pred HHHHHHHhCCCCEEEEecCCcccCCC---------CCcce-eeecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEEEE
Q 021928 215 QDESMLMASGIPYTIIRTGVLQNTPG---------GKQGF-QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEV 282 (305)
Q Consensus 215 ~aE~~l~~~gi~~tilRPg~l~~~~~---------~~~~~-~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~v 282 (305)
.....+...+++++.++||++..... ..... .+........+++++|+|++++.++.++. ..|+.+++
T Consensus 162 ~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~s~~~~~~~G~~~~v 241 (256)
T 2d1y_A 162 SLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLFLASEKASFITGAILPV 241 (256)
T ss_dssp HHHHHHGGGTEEEEEEEECSBCCHHHHHHHC--------CHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEE
T ss_pred HHHHHHhhcCeEEEEEeeCCccCchhhhccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCCCCCEEEE
Confidence 22223445799999999998642210 00000 01111223457899999999999997653 46889999
Q ss_pred ecCC
Q 021928 283 VNGE 286 (305)
Q Consensus 283 ~~g~ 286 (305)
.+|.
T Consensus 242 ~gG~ 245 (256)
T 2d1y_A 242 DGGM 245 (256)
T ss_dssp STTG
T ss_pred CCCc
Confidence 9875
|
| >1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.77 E-value=8.4e-18 Score=147.23 Aligned_cols=183 Identities=15% Similarity=0.187 Sum_probs=126.7
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhc------CccEEEECCc
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR------GVRSIICPSE 171 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~------~~d~Vi~~~~ 171 (305)
+|+|+||||+|+||++++++|+++|++|++++|+++ ...+.++.+|++|.+++.++++ ++|++|++++
T Consensus 2 ~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~------~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~li~~ag 75 (242)
T 1uay_A 2 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE------GEDLIYVEGDVTREEDVRRAVARAQEEAPLFAVVSAAG 75 (242)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC------SSSSEEEECCTTCHHHHHHHHHHHHHHSCEEEEEECCC
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc------ccceEEEeCCCCCHHHHHHHHHHHHhhCCceEEEEccc
Confidence 589999999999999999999999999999999875 2346899999999999988887 7899998733
Q ss_pred c----------------h--------------Hhhhh----hhcC------CCEEEEEcccccccCCCCcccccchHHH-
Q 021928 172 G----------------F--------------ISNAG----SLKG------VQHVILLSQLSVYRGSGGIQALMKGNAR- 210 (305)
Q Consensus 172 g----------------~--------------~~~~a----~~~g------v~~~V~iSS~~~~~~~~~~~~~~~~~~~- 210 (305)
. . +.+++ .+.+ ..+||++||..++.+......|..++..
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~ 155 (242)
T 1uay_A 76 VGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAAYAASKGGV 155 (242)
T ss_dssp CCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCTTCHHHHHHHHHH
T ss_pred ccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCCCCchhhHHHHHH
Confidence 1 1 11111 1111 2399999999888765555555443321
Q ss_pred -HHHHHHHHHHHhCCCCEEEEecCCcccCCC-C-Ccce--eeecCCCC-CCccCHHHHHHHHHHHhhCCCCCCcEEEEec
Q 021928 211 -KLAEQDESMLMASGIPYTIIRTGVLQNTPG-G-KQGF--QFEEGCAA-NGSLSKEDAAFICVEALESIPQTGLIFEVVN 284 (305)
Q Consensus 211 -~~~~~aE~~l~~~gi~~tilRPg~l~~~~~-~-~~~~--~~~~~~~~-~~~Is~~DvA~~iv~~l~~~~~~~~~~~v~~ 284 (305)
.+.+.....+...++++++||||++..... . .... .+...... ..+++++|+|++++.++.++...|+.|++.+
T Consensus 156 ~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~G~~~~v~g 235 (242)
T 1uay_A 156 VALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLPEKAKASLAAQVPFPPRLGRPEEYAALVLHILENPMLNGEVVRLDG 235 (242)
T ss_dssp HHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTSCHHHHHHHHTTCCSSCSCCCHHHHHHHHHHHHHCTTCCSCEEEEST
T ss_pred HHHHHHHHHHHhhcCcEEEEEEeccCcchhhhccchhHHHHHHhhCCCcccCCCHHHHHHHHHHHhcCCCCCCcEEEEcC
Confidence 112222233445799999999999643211 0 0000 00011122 4568999999999999988556789999998
Q ss_pred CC
Q 021928 285 GE 286 (305)
Q Consensus 285 g~ 286 (305)
|.
T Consensus 236 G~ 237 (242)
T 1uay_A 236 AL 237 (242)
T ss_dssp TC
T ss_pred Ce
Confidence 75
|
| >1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.77 E-value=1.1e-17 Score=148.36 Aligned_cols=189 Identities=16% Similarity=0.114 Sum_probs=128.1
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCC-CHHHHHHHhcCccEEEECCcc-
Q 021928 95 PEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDAS-NKKFLKTALRGVRSIICPSEG- 172 (305)
Q Consensus 95 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~-d~~~~~~~~~~~d~Vi~~~~g- 172 (305)
...+|+|+||||+|+||++++++|+++|++|++++|+++...+. + .+.++ +|+. +.+.+.+.+.++|+|||+++.
T Consensus 16 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~-~-~~~~~-~D~~~~~~~~~~~~~~iD~lv~~Ag~~ 92 (249)
T 1o5i_A 16 GIRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRS-G-HRYVV-CDLRKDLDLLFEKVKEVDILVLNAGGP 92 (249)
T ss_dssp CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHT-C-SEEEE-CCTTTCHHHHHHHSCCCSEEEECCCCC
T ss_pred ccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHhh-C-CeEEE-eeHHHHHHHHHHHhcCCCEEEECCCCC
Confidence 44569999999999999999999999999999999997544332 3 46677 9993 345555556689999988431
Q ss_pred ---h--------------------------HhhhhhhcCCCEEEEEcccccccCCCCcccccchHH--HHHHHHHHHHHH
Q 021928 173 ---F--------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA--RKLAEQDESMLM 221 (305)
Q Consensus 173 ---~--------------------------~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~--~~~~~~aE~~l~ 221 (305)
. +...+++.+.++||++||..++.+......|..++. ..+.+.....+.
T Consensus 93 ~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~ 172 (249)
T 1o5i_A 93 KAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIENLYTSNSARMALTGFLKTLSFEVA 172 (249)
T ss_dssp CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHG
T ss_pred CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchHhcCCCCCCchHHHHHHHHHHHHHHHHHHhh
Confidence 0 112244567889999999988876555555544332 112222223345
Q ss_pred hCCCCEEEEecCCcccCCCC--Ccce---eeecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEEEEecCC
Q 021928 222 ASGIPYTIIRTGVLQNTPGG--KQGF---QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVNGE 286 (305)
Q Consensus 222 ~~gi~~tilRPg~l~~~~~~--~~~~---~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~v~~g~ 286 (305)
..++++++|+||++...... .... .+........+++++|+|++++.++..+. ..|+.+++.+|.
T Consensus 173 ~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~i~~l~s~~~~~~tG~~~~vdgG~ 244 (249)
T 1o5i_A 173 PYGITVNCVAPGWTETERVKELLSEEKKKQVESQIPMRRMAKPEEIASVVAFLCSEKASYLTGQTIVVDGGL 244 (249)
T ss_dssp GGTEEEEEEEECSBCCTTHHHHSCHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred hcCeEEEEEeeCCCccCcccccchhhHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCCCCCEEEECCCc
Confidence 67999999999996543210 0000 11111222457799999999999997543 358999999875
|
| >2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=7.7e-18 Score=150.01 Aligned_cols=191 Identities=15% Similarity=0.070 Sum_probs=129.8
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh------cCCCcEEeecCCCCHHHHHHHh--------c
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTAL--------R 161 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~~~v~~v~~D~~d~~~~~~~~--------~ 161 (305)
..+|+|+||||+|+||++++++|+++|++|++++|++++..+. .+.++.++.+|++|.+++.+++ .
T Consensus 7 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g 86 (260)
T 2ae2_A 7 LEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHG 86 (260)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTT
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 3468999999999999999999999999999999997653321 2346889999999998888777 5
Q ss_pred CccEEEECCcc-----h---------------------Hhhh----hhhcCCCEEEEEcccccccCCCCcccccchHHH-
Q 021928 162 GVRSIICPSEG-----F---------------------ISNA----GSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR- 210 (305)
Q Consensus 162 ~~d~Vi~~~~g-----~---------------------~~~~----a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~- 210 (305)
++|++||+++. . +..+ +++.+.++||++||..++.+......|..++..
T Consensus 87 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~ 166 (260)
T 2ae2_A 87 KLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKGAM 166 (260)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCCTTCHHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCCcchHHHHHHHH
Confidence 68999988431 0 1111 234567899999999887665555555443321
Q ss_pred -HHHHHHHHHHHhCCCCEEEEecCCcccCCC----CCcce-----eeecCCCCCCccCHHHHHHHHHHHhhCCC--CCCc
Q 021928 211 -KLAEQDESMLMASGIPYTIIRTGVLQNTPG----GKQGF-----QFEEGCAANGSLSKEDAAFICVEALESIP--QTGL 278 (305)
Q Consensus 211 -~~~~~aE~~l~~~gi~~tilRPg~l~~~~~----~~~~~-----~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~ 278 (305)
.+.+.....+...++++++|+||++..... ..... .+........+++++|+|++++.++..+. ..|+
T Consensus 167 ~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~v~~l~s~~~~~~tG~ 246 (260)
T 2ae2_A 167 DQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAAMVAFLCFPAASYVTGQ 246 (260)
T ss_dssp HHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTSTTCSCBCHHHHHHHHHHHHSGGGTTCCSC
T ss_pred HHHHHHHHHHHhhcCcEEEEEecCCCCCcchhhhccChhhHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCccccCCCCC
Confidence 111112222334689999999999643210 00000 01111223457899999999999986543 4689
Q ss_pred EEEEecCC
Q 021928 279 IFEVVNGE 286 (305)
Q Consensus 279 ~~~v~~g~ 286 (305)
++++.+|.
T Consensus 247 ~~~vdgG~ 254 (260)
T 2ae2_A 247 IIYVDGGL 254 (260)
T ss_dssp EEEESTTG
T ss_pred EEEECCCc
Confidence 99998774
|
| >2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=3.2e-18 Score=154.17 Aligned_cols=191 Identities=11% Similarity=0.109 Sum_probs=129.7
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh------cCCCcEEeecCCCCHHHHHHHhc-------C
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------G 162 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~~~v~~v~~D~~d~~~~~~~~~-------~ 162 (305)
..+++|+||||+|+||++++++|+++|++|++++|++++..+. .+.++.++.+|++|.+++.++++ +
T Consensus 20 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 99 (277)
T 2rhc_B 20 QDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGP 99 (277)
T ss_dssp TTSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCS
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence 3458999999999999999999999999999999997653221 14568899999999988887765 6
Q ss_pred ccEEEECCcc----h----------------------Hhhh------hhhcCCCEEEEEcccccccCCCCcccccchHHH
Q 021928 163 VRSIICPSEG----F----------------------ISNA------GSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR 210 (305)
Q Consensus 163 ~d~Vi~~~~g----~----------------------~~~~------a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~ 210 (305)
+|+||++++. . +..+ +++.+.++||++||..++.+......|..++..
T Consensus 100 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a 179 (277)
T 2rhc_B 100 VDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHG 179 (277)
T ss_dssp CSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHTEEEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcCCeEEEEECccccccCCCCCccHHHHHHH
Confidence 8999988431 0 1111 223356899999999877655555555443321
Q ss_pred --HHHHHHHHHHHhCCCCEEEEecCCcccCCCCC-------------cc--eeeecCCCCCCccCHHHHHHHHHHHhhCC
Q 021928 211 --KLAEQDESMLMASGIPYTIIRTGVLQNTPGGK-------------QG--FQFEEGCAANGSLSKEDAAFICVEALESI 273 (305)
Q Consensus 211 --~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~-------------~~--~~~~~~~~~~~~Is~~DvA~~iv~~l~~~ 273 (305)
.+.+.....+...++++++|+||++....... .. ..+........+++++|+|++++.++.++
T Consensus 180 ~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dvA~~v~~l~s~~ 259 (277)
T 2rhc_B 180 VVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAYLIGPG 259 (277)
T ss_dssp HHHHHHHHHHHHTTTEEEEEEEEECSBCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGG
T ss_pred HHHHHHHHHHHHHHhCcEEEEEecCcCcCchhhhhhhhcccccccchHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCch
Confidence 11222222344578999999999964321100 00 00001112245789999999999999754
Q ss_pred C--CCCcEEEEecCC
Q 021928 274 P--QTGLIFEVVNGE 286 (305)
Q Consensus 274 ~--~~~~~~~v~~g~ 286 (305)
. ..|+++++.+|.
T Consensus 260 ~~~~tG~~~~vdGG~ 274 (277)
T 2rhc_B 260 AAAVTAQALNVCGGL 274 (277)
T ss_dssp GTTCCSCEEEESTTC
T ss_pred hcCCCCcEEEECCCc
Confidence 3 468999999875
|
| >2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.77 E-value=1.7e-17 Score=145.90 Aligned_cols=182 Identities=12% Similarity=0.104 Sum_probs=125.1
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCC-------eEEEEEcCcchhhhh------cCCCcEEeecCCCCHHHHHHHhc---
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRT-------RIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR--- 161 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~-------~V~~~~R~~~~~~~~------~~~~v~~v~~D~~d~~~~~~~~~--- 161 (305)
+|+|+||||+|+||++++++|+++|+ +|+++.|++++..+. .+.++.++.+|++|.+++.++++
T Consensus 2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~ 81 (244)
T 2bd0_A 2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIV 81 (244)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHHHHH
Confidence 47899999999999999999999999 999999987653321 14468899999999988887775
Q ss_pred ----CccEEEECCcch--------------------------Hhh----hhhhcCCCEEEEEcccccccCCCCcccccch
Q 021928 162 ----GVRSIICPSEGF--------------------------ISN----AGSLKGVQHVILLSQLSVYRGSGGIQALMKG 207 (305)
Q Consensus 162 ----~~d~Vi~~~~g~--------------------------~~~----~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~ 207 (305)
++|+|||+++.. +.. .+++.+.++||++||..++.+......|..+
T Consensus 82 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~s 161 (244)
T 2bd0_A 82 ERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAFRHSSIYCMS 161 (244)
T ss_dssp HHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred HhCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEEecchhcCCCCCCchhHHH
Confidence 689999884310 111 1234567899999999888765555555443
Q ss_pred HHH--HHHHHHHHHHHhCCCCEEEEecCCcccCCCCCcceeeecCCCCCCccCHHHHHHHHHHHhhCCCC--CCcEEEEe
Q 021928 208 NAR--KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQ--TGLIFEVV 283 (305)
Q Consensus 208 ~~~--~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~~~~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~~--~~~~~~v~ 283 (305)
+.. .+.+.....+...++++++||||++........ .. .....+++++|+|++++.++..+.. .++++...
T Consensus 162 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~----~~-~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~ 236 (244)
T 2bd0_A 162 KFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKV----DD-EMQALMMMPEDIAAPVVQAYLQPSRTVVEEIILRP 236 (244)
T ss_dssp HHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCC----CS-TTGGGSBCHHHHHHHHHHHHTSCTTEEEEEEEEEE
T ss_pred HHHHHHHHHHHHHHhhccCcEEEEEECCCccchhhhhc----cc-cccccCCCHHHHHHHHHHHHhCCccccchheEEec
Confidence 321 111222233445789999999999654322111 00 1123678999999999999986553 34444444
Q ss_pred c
Q 021928 284 N 284 (305)
Q Consensus 284 ~ 284 (305)
+
T Consensus 237 ~ 237 (244)
T 2bd0_A 237 T 237 (244)
T ss_dssp T
T ss_pred c
Confidence 3
|
| >3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.77 E-value=1.9e-17 Score=148.58 Aligned_cols=191 Identities=13% Similarity=0.039 Sum_probs=134.6
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh---hcCCCcEEeecCCCCHHHHHHHhc-------CccE
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALR-------GVRS 165 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~---~~~~~v~~v~~D~~d~~~~~~~~~-------~~d~ 165 (305)
..+|+++||||+|+||++++++|+++|++|++++|++++..+ ..+.++.++.+|++|.+++.++++ ++|+
T Consensus 9 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~ 88 (271)
T 3tzq_B 9 LENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVGRGAVHHVVDLTNEVSVRALIDFTIDTFGRLDI 88 (271)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCCeEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 346899999999999999999999999999999999866432 235678999999999988888776 7899
Q ss_pred EEECCcch----------------------------Hhhh----hhhcCCCEEEEEcccccccCCCCcccccchHHH--H
Q 021928 166 IICPSEGF----------------------------ISNA----GSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--K 211 (305)
Q Consensus 166 Vi~~~~g~----------------------------~~~~----a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~--~ 211 (305)
+|++++.. +..+ .++.+..+||++||..++.+......|..++.. .
T Consensus 89 lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~ 168 (271)
T 3tzq_B 89 VDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAGGGAIVNISSATAHAAYDMSTAYACTKAAIET 168 (271)
T ss_dssp EEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSBCSSCHHHHHHHHHHHH
T ss_pred EEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCHHHcCCCCCChHHHHHHHHHHH
Confidence 99883310 1111 245667899999999888776666566544321 1
Q ss_pred HHHHHHHHHHhCCCCEEEEecCCcccCCCC-C--cce--eeecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEEEEec
Q 021928 212 LAEQDESMLMASGIPYTIIRTGVLQNTPGG-K--QGF--QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVN 284 (305)
Q Consensus 212 ~~~~aE~~l~~~gi~~tilRPg~l~~~~~~-~--~~~--~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~v~~ 284 (305)
+.+.....+...+++++.|+||++...... . ... .+........+.+++|+|++++.++.+.. ..|+++++.+
T Consensus 169 l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdG 248 (271)
T 3tzq_B 169 LTRYVATQYGRHGVRCNAIAPGLVRTPRLEVGLPQPIVDIFATHHLAGRIGEPHEIAELVCFLASDRAAFITGQVIAADS 248 (271)
T ss_dssp HHHHHHHHHGGGTEEEEEEEECCBCCTTTC---CHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred HHHHHHHHHhhcCEEEEEEEeCCCcCccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcccCCcCCCEEEECC
Confidence 122222334457999999999996543221 1 000 01112223456789999999999997543 4689999998
Q ss_pred CC
Q 021928 285 GE 286 (305)
Q Consensus 285 g~ 286 (305)
|.
T Consensus 249 G~ 250 (271)
T 3tzq_B 249 GL 250 (271)
T ss_dssp TT
T ss_pred Cc
Confidence 84
|
| >1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.77 E-value=1.6e-17 Score=149.10 Aligned_cols=191 Identities=14% Similarity=0.104 Sum_probs=129.4
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh------cCCCcEEeecCCCCHHHHHHHh--------c
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTAL--------R 161 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~~~v~~v~~D~~d~~~~~~~~--------~ 161 (305)
..+|+++||||+|+||++++++|+++|++|++++|++++..+. .+.++.++.+|++|.+++.+++ .
T Consensus 19 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g 98 (273)
T 1ae1_A 19 LKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDG 98 (273)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTS
T ss_pred CCCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 3458999999999999999999999999999999997653221 2456889999999998887776 5
Q ss_pred CccEEEECCcch--------------------------Hhh----hhhhcCCCEEEEEcccccccCCCCcccccchHH--
Q 021928 162 GVRSIICPSEGF--------------------------ISN----AGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA-- 209 (305)
Q Consensus 162 ~~d~Vi~~~~g~--------------------------~~~----~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~-- 209 (305)
++|++|++++.. +.. .+++.+.++||++||..++.+.+....|..++.
T Consensus 99 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~ 178 (273)
T 1ae1_A 99 KLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASKGAI 178 (273)
T ss_dssp CCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCCTTCHHHHHHHHHH
T ss_pred CCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHhhcCCCCCcchhHHHHHHH
Confidence 689999884310 111 123456789999999988876555555554332
Q ss_pred HHHHHHHHHHHHhCCCCEEEEecCCcccCCCCCc-c-------e--eeecCCCCCCccCHHHHHHHHHHHhhCCC--CCC
Q 021928 210 RKLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQ-G-------F--QFEEGCAANGSLSKEDAAFICVEALESIP--QTG 277 (305)
Q Consensus 210 ~~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~~-~-------~--~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~ 277 (305)
..+.+.....+...+++++.|+||++........ . . .+........+.+++|+|++++.++..+. ..|
T Consensus 179 ~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~~~~~~tG 258 (273)
T 1ae1_A 179 NQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQEVSALIAFLCFPAASYITG 258 (273)
T ss_dssp HHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHHSTTCSCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred HHHHHHHHHHHhhcCcEEEEEEeCCCcCchhhhhhhcccCcHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCcCC
Confidence 1122222233455799999999999653321110 0 0 00001122346799999999999986543 368
Q ss_pred cEEEEecCC
Q 021928 278 LIFEVVNGE 286 (305)
Q Consensus 278 ~~~~v~~g~ 286 (305)
+++++.+|.
T Consensus 259 ~~i~vdGG~ 267 (273)
T 1ae1_A 259 QIIWADGGF 267 (273)
T ss_dssp CEEEESTTG
T ss_pred CEEEECCCc
Confidence 999998874
|
| >3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=99.76 E-value=2.1e-17 Score=147.13 Aligned_cols=190 Identities=15% Similarity=0.148 Sum_probs=131.1
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh------cCCCcEEeecCCCCHHHHHHHhc-------Cc
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GV 163 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~~~v~~v~~D~~d~~~~~~~~~-------~~ 163 (305)
.+|++|||||+|+||++++++|+++|++|++++|++++..+. .+.++.++.+|++|.+++.++++ ++
T Consensus 5 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 84 (257)
T 3imf_A 5 KEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKFGRI 84 (257)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 458999999999999999999999999999999997663321 23478899999999988887775 68
Q ss_pred cEEEECCcc----h----------------------Hhhh----h-hhcCCCEEEEEcccccccCCCCcccccchHHH--
Q 021928 164 RSIICPSEG----F----------------------ISNA----G-SLKGVQHVILLSQLSVYRGSGGIQALMKGNAR-- 210 (305)
Q Consensus 164 d~Vi~~~~g----~----------------------~~~~----a-~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~-- 210 (305)
|++||+++. . +..+ . ++.+..+||++||..++.+..+...|..++..
T Consensus 85 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~ 164 (257)
T 3imf_A 85 DILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAWDAGPGVIHSAAAKAGVL 164 (257)
T ss_dssp CEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGGSCCTTCHHHHHHHHHHH
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhhccCCCCcHHHHHHHHHHH
Confidence 999988441 0 1111 1 34456899999999888766665556544321
Q ss_pred HHHHHHHHHHH-hCCCCEEEEecCCcccCCCCCcc-----e--eeecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEE
Q 021928 211 KLAEQDESMLM-ASGIPYTIIRTGVLQNTPGGKQG-----F--QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIF 280 (305)
Q Consensus 211 ~~~~~aE~~l~-~~gi~~tilRPg~l~~~~~~~~~-----~--~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~ 280 (305)
.+.+.....+. ..+++++.|+||++......... . .+........+.+++|+|++++.++.+.. ..|+++
T Consensus 165 ~l~~~la~e~~~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i 244 (257)
T 3imf_A 165 AMTKTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWISEEMAKRTIQSVPLGRLGTPEEIAGLAYYLCSDEAAYINGTCM 244 (257)
T ss_dssp HHHHHHHHHHHHHHCCEEEEEEECCBSSCCCC-------CCSHHHHTTSTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred HHHHHHHHHhccccCeEEEEEEECCCcCCcchhhcccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCccCCEE
Confidence 11122222233 56999999999996533211100 0 00011222456799999999999997544 468999
Q ss_pred EEecCC
Q 021928 281 EVVNGE 286 (305)
Q Consensus 281 ~v~~g~ 286 (305)
++.+|.
T Consensus 245 ~vdGG~ 250 (257)
T 3imf_A 245 TMDGGQ 250 (257)
T ss_dssp EESTTT
T ss_pred EECCCc
Confidence 999875
|
| >4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=9.1e-18 Score=150.66 Aligned_cols=192 Identities=14% Similarity=0.114 Sum_probs=132.2
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCc-chhh------hhcCCCcEEeecCCCCHHHHHHHhc------
Q 021928 95 PEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK-RNAM------ESFGTYVESMAGDASNKKFLKTALR------ 161 (305)
Q Consensus 95 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~-~~~~------~~~~~~v~~v~~D~~d~~~~~~~~~------ 161 (305)
+..+|+|+||||+|+||++++++|+++|++|+++.|+. +... ...+.++.++.+|++|.++++++++
T Consensus 25 ~l~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~ 104 (269)
T 4dmm_A 25 PLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIERW 104 (269)
T ss_dssp TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 34568999999999999999999999999999998843 3221 1224578899999999988887775
Q ss_pred -CccEEEECCcch--------------------------Hh----hhhhhcCCCEEEEEcccccccCCCCcccccchHHH
Q 021928 162 -GVRSIICPSEGF--------------------------IS----NAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR 210 (305)
Q Consensus 162 -~~d~Vi~~~~g~--------------------------~~----~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~ 210 (305)
.+|++|++++.. +. ...++.+..+||++||..++.+......|..++..
T Consensus 105 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a 184 (269)
T 4dmm_A 105 GRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSGRIINIASVVGEMGNPGQANYSAAKAG 184 (269)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCHHHHHCCTTCHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCCCCchhHHHHHHH
Confidence 789999884310 11 11234567899999999887766655556544321
Q ss_pred --HHHHHHHHHHHhCCCCEEEEecCCcccCCCCCc-ceeeecCCCCCCccCHHHHHHHHHHHhhCCC---CCCcEEEEec
Q 021928 211 --KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQ-GFQFEEGCAANGSLSKEDAAFICVEALESIP---QTGLIFEVVN 284 (305)
Q Consensus 211 --~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~~-~~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~---~~~~~~~v~~ 284 (305)
.+.+.....+...+++++.|+||++........ ...+........+.+++|+|++++.++.++. ..|+++++.+
T Consensus 185 ~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~p~~r~~~~~dvA~~v~~l~s~~~~~~itG~~i~vdG 264 (269)
T 4dmm_A 185 VIGLTKTVAKELASRGITVNAVAPGFIATDMTSELAAEKLLEVIPLGRYGEAAEVAGVVRFLAADPAAAYITGQVINIDG 264 (269)
T ss_dssp HHHHHHHHHHHHGGGTCEEEEEEECCBTTSCSCHHHHHHHGGGCTTSSCBCHHHHHHHHHHHHHCGGGGGCCSCEEEEST
T ss_pred HHHHHHHHHHHHhhhCcEEEEEEECCCcCcccccccHHHHHhcCCCCCCCCHHHHHHHHHHHhCCcccCCCcCCEEEECC
Confidence 122222233456799999999999654332110 0001111223456789999999999998743 3589999987
Q ss_pred CC
Q 021928 285 GE 286 (305)
Q Consensus 285 g~ 286 (305)
|.
T Consensus 265 G~ 266 (269)
T 4dmm_A 265 GL 266 (269)
T ss_dssp TS
T ss_pred Ce
Confidence 74
|
| >3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.76 E-value=1.8e-17 Score=149.29 Aligned_cols=191 Identities=13% Similarity=0.115 Sum_probs=131.0
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcc------------hhh------hhcCCCcEEeecCCCCHHHHH
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR------------NAM------ESFGTYVESMAGDASNKKFLK 157 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~------------~~~------~~~~~~v~~v~~D~~d~~~~~ 157 (305)
..+|+++||||+|+||++++++|+++|++|++++|++. ... ...+.++.++.+|++|.++++
T Consensus 8 l~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~ 87 (281)
T 3s55_A 8 FEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAALE 87 (281)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHH
Confidence 34699999999999999999999999999999999732 111 123457899999999998888
Q ss_pred HHhc-------CccEEEECCcch--------------------------Hhh----hhhhcCCCEEEEEcccccccCCCC
Q 021928 158 TALR-------GVRSIICPSEGF--------------------------ISN----AGSLKGVQHVILLSQLSVYRGSGG 200 (305)
Q Consensus 158 ~~~~-------~~d~Vi~~~~g~--------------------------~~~----~a~~~gv~~~V~iSS~~~~~~~~~ 200 (305)
++++ ++|++||+++.. +.. .+++.+..+||++||..++.+...
T Consensus 88 ~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~ 167 (281)
T 3s55_A 88 SFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHSANFA 167 (281)
T ss_dssp HHHHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCTT
T ss_pred HHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhcCCCCC
Confidence 7775 789999884310 111 133456789999999988877666
Q ss_pred cccccchHHH--HHHHHHHHHHHhCCCCEEEEecCCcccCCCCCc----cee-------e--------ecCCCCCCccCH
Q 021928 201 IQALMKGNAR--KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQ----GFQ-------F--------EEGCAANGSLSK 259 (305)
Q Consensus 201 ~~~~~~~~~~--~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~~----~~~-------~--------~~~~~~~~~Is~ 259 (305)
...|..++.. .+.+.....+...+++++.|+||++........ ... . ........+.++
T Consensus 168 ~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 247 (281)
T 3s55_A 168 QASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKPTLKDVESVFASLHLQYAPFLKP 247 (281)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSTTTSSHHHHHC-------CCHHHHHHHHHHHCSSSCSCBCH
T ss_pred CchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccccchhhhccccccccccchhHHHHHHHhhhccCcCCCCH
Confidence 5556544321 111222222345799999999999654322110 000 0 011122567899
Q ss_pred HHHHHHHHHHhhCCC--CCCcEEEEecCC
Q 021928 260 EDAAFICVEALESIP--QTGLIFEVVNGE 286 (305)
Q Consensus 260 ~DvA~~iv~~l~~~~--~~~~~~~v~~g~ 286 (305)
+|+|++++.++.++. ..|++++|.+|.
T Consensus 248 ~dvA~~v~~L~s~~~~~itG~~i~vdgG~ 276 (281)
T 3s55_A 248 EEVTRAVLFLVDEASSHITGTVLPIDAGA 276 (281)
T ss_dssp HHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred HHHHHHHHHHcCCcccCCCCCEEEECCCc
Confidence 999999999997654 358999999875
|
| >3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=1.2e-17 Score=147.63 Aligned_cols=190 Identities=15% Similarity=0.120 Sum_probs=130.7
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCc-chhhh------hcCCCcEEeecCCCCHHHHHHHhc-------C
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK-RNAME------SFGTYVESMAGDASNKKFLKTALR-------G 162 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~-~~~~~------~~~~~v~~v~~D~~d~~~~~~~~~-------~ 162 (305)
++|+++||||+|+||++++++|+++|++|+++.|+. +...+ ..+.++.++.+|++|.++++++++ +
T Consensus 3 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 82 (246)
T 3osu_A 3 MTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFGS 82 (246)
T ss_dssp CSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 358999999999999999999999999999988754 32211 124568899999999988887776 7
Q ss_pred ccEEEECCcch--------------------------Hhhh----hhhcCCCEEEEEcccccccCCCCcccccchHHH--
Q 021928 163 VRSIICPSEGF--------------------------ISNA----GSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR-- 210 (305)
Q Consensus 163 ~d~Vi~~~~g~--------------------------~~~~----a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~-- 210 (305)
+|++||+++.. +..+ .++.+..+||++||..++.+.++...|..++..
T Consensus 83 id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~ 162 (246)
T 3osu_A 83 LDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVI 162 (246)
T ss_dssp CCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHHHHH
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCCCCChHHHHHHHHHH
Confidence 89999884310 1112 244677899999999887766666566544321
Q ss_pred HHHHHHHHHHHhCCCCEEEEecCCcccCCCCC-cc-e--eeecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEEEEec
Q 021928 211 KLAEQDESMLMASGIPYTIIRTGVLQNTPGGK-QG-F--QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVN 284 (305)
Q Consensus 211 ~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~-~~-~--~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~v~~ 284 (305)
.+.+.....+...+++++.++||++....... .. . .+........+.+++|+|++++.++.++. ..|++|++.+
T Consensus 163 ~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v~~l~s~~~~~itG~~i~vdg 242 (246)
T 3osu_A 163 GLTKSAARELASRGITVNAVAPGFIVSDMTDALSDELKEQMLTQIPLARFGQDTDIANTVAFLASDKAKYITGQTIHVNG 242 (246)
T ss_dssp HHHHHHHHHHGGGTEEEEEEEECSBGGGCCSCSCHHHHHHHHTTCTTCSCBCHHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred HHHHHHHHHhcccCeEEEEEEECCCcCCcccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCCCCEEEeCC
Confidence 12222223345679999999999965432211 00 0 01112233456789999999999997544 3589999987
Q ss_pred CC
Q 021928 285 GE 286 (305)
Q Consensus 285 g~ 286 (305)
|.
T Consensus 243 G~ 244 (246)
T 3osu_A 243 GM 244 (246)
T ss_dssp TS
T ss_pred Cc
Confidence 74
|
| >2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A | Back alignment and structure |
|---|
Probab=99.76 E-value=6.7e-18 Score=148.56 Aligned_cols=186 Identities=15% Similarity=0.180 Sum_probs=126.1
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHh-------cCccEEEECC
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTAL-------RGVRSIICPS 170 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~-------~~~d~Vi~~~ 170 (305)
+|+++||||+|+||++++++|+++|++|++++|++++..+..+ +.++.+|++| +++.+++ .++|++|+++
T Consensus 2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~--~~~~~~D~~~-~~~~~~~~~~~~~~g~id~lv~~A 78 (239)
T 2ekp_A 2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEEAAQSLG--AVPLPTDLEK-DDPKGLVKRALEALGGLHVLVHAA 78 (239)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHT--CEEEECCTTT-SCHHHHHHHHHHHHTSCCEEEECC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhhC--cEEEecCCch-HHHHHHHHHHHHHcCCCCEEEECC
Confidence 4899999999999999999999999999999999876433343 7889999998 6655544 4789999884
Q ss_pred cc----h----------------------Hh----hhhhhcCCCEEEEEcccccccCC--CCcccccchHH--HHHHHHH
Q 021928 171 EG----F----------------------IS----NAGSLKGVQHVILLSQLSVYRGS--GGIQALMKGNA--RKLAEQD 216 (305)
Q Consensus 171 ~g----~----------------------~~----~~a~~~gv~~~V~iSS~~~~~~~--~~~~~~~~~~~--~~~~~~a 216 (305)
+. . +. ..+++.+.++||++||..++.+. .+...|..++. ..+.+..
T Consensus 79 g~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l 158 (239)
T 2ekp_A 79 AVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWGRVLFIGSVTTFTAGGPVPIPAYTTAKTALLGLTRAL 158 (239)
T ss_dssp CCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTSCCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhccCCCCCCCccHHHHHHHHHHHHHHH
Confidence 31 0 11 11244578899999999887654 44444544332 1122223
Q ss_pred HHHHHhCCCCEEEEecCCcccCCCC----Ccce--eeecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEEEEecCC
Q 021928 217 ESMLMASGIPYTIIRTGVLQNTPGG----KQGF--QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVNGE 286 (305)
Q Consensus 217 E~~l~~~gi~~tilRPg~l~~~~~~----~~~~--~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~v~~g~ 286 (305)
...+...++++++|+||++...... .... .+........+.+++|+|++++.++.++. ..|+.+.+.+|.
T Consensus 159 a~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~~~~tG~~~~vdgG~ 236 (239)
T 2ekp_A 159 AKEWARLGIRVNLLCPGYVETEFTLPLRQNPELYEPITARIPMGRWARPEEIARVAAVLCGDEAEYLTGQAVAVDGGF 236 (239)
T ss_dssp HHHHGGGTEEEEEEEECSBCSGGGHHHHTCHHHHHHHHTTCTTSSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTT
T ss_pred HHHhhhcCcEEEEEEeCCccCchhhccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCCCCCEEEECCCc
Confidence 3334567999999999996433210 0000 00011122356899999999999997533 468899998774
|
| >3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E | Back alignment and structure |
|---|
Probab=99.76 E-value=5.5e-18 Score=150.19 Aligned_cols=192 Identities=15% Similarity=0.141 Sum_probs=134.2
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh---hcCCCcEEeecCCCCHHHHHHHhc-------Ccc
Q 021928 95 PEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALR-------GVR 164 (305)
Q Consensus 95 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~---~~~~~v~~v~~D~~d~~~~~~~~~-------~~d 164 (305)
+..+|+++||||+|+||++++++|+++|++|+++.|+++...+ .....+.++.+|++|.++++++++ ++|
T Consensus 6 ~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD 85 (248)
T 3op4_A 6 NLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNVTNPESIEAVLKAITDEFGGVD 85 (248)
T ss_dssp CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHCCCS
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceEEEEeCCCHHHHHHHHHHHHHHcCCCC
Confidence 3456999999999999999999999999999999999765432 234457889999999998887776 789
Q ss_pred EEEECCcc----h----------------------Hh----hhhhhcCCCEEEEEcccccccCCCCcccccchHH--HHH
Q 021928 165 SIICPSEG----F----------------------IS----NAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA--RKL 212 (305)
Q Consensus 165 ~Vi~~~~g----~----------------------~~----~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~--~~~ 212 (305)
++||+++. . +. ...++.+..+||++||..++.+..+...|..++. ..+
T Consensus 86 ~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~l 165 (248)
T 3op4_A 86 ILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGF 165 (248)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHHHHHHH
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCCCCChHHHHHHHHHHHH
Confidence 99988431 0 11 1123456689999999988776666666655432 112
Q ss_pred HHHHHHHHHhCCCCEEEEecCCcccCCCCC-cc---eeeecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEEEEecCC
Q 021928 213 AEQDESMLMASGIPYTIIRTGVLQNTPGGK-QG---FQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVNGE 286 (305)
Q Consensus 213 ~~~aE~~l~~~gi~~tilRPg~l~~~~~~~-~~---~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~v~~g~ 286 (305)
.+.....+...+++++.|+||++....... .. ...........+.+++|+|++++.++.... ..|+++++.+|.
T Consensus 166 ~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v~~L~s~~~~~itG~~i~vdgG~ 245 (248)
T 3op4_A 166 TKSMAREVASRGVTVNTVAPGFIETDMTKALNDEQRTATLAQVPAGRLGDPREIASAVAFLASPEAAYITGETLHVNGGM 245 (248)
T ss_dssp HHHHHHHHGGGTEEEEEEEECSBSSTTTTTSCHHHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred HHHHHHHHHHhCeEEEEEeeCCCCCchhhhcCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCCccCCccCcEEEECCCe
Confidence 222223345679999999999965432211 00 001112233457799999999999996543 368999999875
|
| >1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=1.1e-17 Score=148.41 Aligned_cols=190 Identities=12% Similarity=0.067 Sum_probs=128.3
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEc-Ccchhhhh------cCCCcEEeecCCCCHHHHHHHhc-------C
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVK-DKRNAMES------FGTYVESMAGDASNKKFLKTALR-------G 162 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R-~~~~~~~~------~~~~v~~v~~D~~d~~~~~~~~~-------~ 162 (305)
.+++|+||||+|+||++++++|+++|++|++++| ++++..+. .+.++.++.+|++|.+++.++++ +
T Consensus 6 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 85 (261)
T 1gee_A 6 EGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFGK 85 (261)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 4589999999999999999999999999999999 65442211 23468899999999988887776 7
Q ss_pred ccEEEECCcc----h--------------------------HhhhhhhcC-CCEEEEEcccccccCCCCcccccchHHH-
Q 021928 163 VRSIICPSEG----F--------------------------ISNAGSLKG-VQHVILLSQLSVYRGSGGIQALMKGNAR- 210 (305)
Q Consensus 163 ~d~Vi~~~~g----~--------------------------~~~~a~~~g-v~~~V~iSS~~~~~~~~~~~~~~~~~~~- 210 (305)
+|+|||+++. . ......+.+ .++||++||...+.+..+...|..++..
T Consensus 86 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~ 165 (261)
T 1gee_A 86 LDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGM 165 (261)
T ss_dssp CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTCHHHHHHHHHH
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhcCCCCCccHHHHHHHHH
Confidence 8999988431 0 011123344 6799999999887665555555443321
Q ss_pred -HHHHHHHHHHHhCCCCEEEEecCCcccCCCCC----cce--eeecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEEE
Q 021928 211 -KLAEQDESMLMASGIPYTIIRTGVLQNTPGGK----QGF--QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFE 281 (305)
Q Consensus 211 -~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~----~~~--~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~ 281 (305)
.+.+.....+...+++++++|||++....... ... .+........+++++|+|++++.++..+. ..|+.++
T Consensus 166 ~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~ 245 (261)
T 1gee_A 166 KLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMGYIGEPEEIAAVAAWLASSEASYVTGITLF 245 (261)
T ss_dssp HHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHSHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred HHHHHHHHHHhcccCeEEEEEeeCCcCCchhhhcccChhHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCCCcEEE
Confidence 11122222334569999999999965332110 000 00011122457899999999999997532 4688999
Q ss_pred EecCC
Q 021928 282 VVNGE 286 (305)
Q Consensus 282 v~~g~ 286 (305)
+.+|.
T Consensus 246 v~gg~ 250 (261)
T 1gee_A 246 ADGGM 250 (261)
T ss_dssp ESTTG
T ss_pred EcCCc
Confidence 99875
|
| >3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=99.76 E-value=1e-17 Score=150.12 Aligned_cols=180 Identities=13% Similarity=0.122 Sum_probs=127.2
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhc-------CccEEEE
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR-------GVRSIIC 168 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~-------~~d~Vi~ 168 (305)
.++|+||||||+|+||++++++|+++|++|++++|+.++..+.....+.++.+|++|.+++.++++ ++|++|+
T Consensus 14 ~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvn 93 (266)
T 3p19_A 14 SMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKALNLPNTLCAQVDVTDKYTFDTAITRAEKIYGPADAIVN 93 (266)
T ss_dssp -CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHTTCCTTEEEEECCTTCHHHHHHHHHHHHHHHCSEEEEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHhhcCCceEEEecCCCHHHHHHHHHHHHHHCCCCCEEEE
Confidence 356899999999999999999999999999999999877665555578999999999988887775 7899998
Q ss_pred CCcch------------------------------HhhhhhhcCCCEEEEEcccccccCCCCcccccchHHH--HHHHHH
Q 021928 169 PSEGF------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--KLAEQD 216 (305)
Q Consensus 169 ~~~g~------------------------------~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~--~~~~~a 216 (305)
+++.. +...+++.+..+||++||..++.+......|..++.. .+.+..
T Consensus 94 nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~asK~a~~~~~~~l 173 (266)
T 3p19_A 94 NAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARNCGTIINISSIAGKKTFPDHAAYCGTKFAVHAISENV 173 (266)
T ss_dssp CCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHH
T ss_pred CCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhCCCCCCCchHHHHHHHHHHHHHHH
Confidence 84310 1112345677899999999888776665566544321 122222
Q ss_pred HHHHHhCCCCEEEEecCCcccCCCCC---ccee--eec-CCCCCCccCHHHHHHHHHHHhhCCCC
Q 021928 217 ESMLMASGIPYTIIRTGVLQNTPGGK---QGFQ--FEE-GCAANGSLSKEDAAFICVEALESIPQ 275 (305)
Q Consensus 217 E~~l~~~gi~~tilRPg~l~~~~~~~---~~~~--~~~-~~~~~~~Is~~DvA~~iv~~l~~~~~ 275 (305)
...+...+++++.|+||++....... .... +.. ......+++++|||++++.++.++..
T Consensus 174 a~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~av~~l~~~~~~ 238 (266)
T 3p19_A 174 REEVAASNVRVMTIAPSAVKTELLSHTTSQQIKDGYDAWRVDMGGVLAADDVARAVLFAYQQPQN 238 (266)
T ss_dssp HHHHGGGTCEEEEEEECSBSSSGGGGCSCHHHHHHHHHHHHHTTCCBCHHHHHHHHHHHHHSCTT
T ss_pred HHHhcccCcEEEEEeeCccccchhhcccchhhhHHHHhhcccccCCCCHHHHHHHHHHHHcCCCC
Confidence 23345679999999999965432110 0000 000 01224578999999999999987764
|
| >3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.76 E-value=1.2e-17 Score=149.28 Aligned_cols=191 Identities=16% Similarity=0.153 Sum_probs=130.5
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh------cC-CCcEEeecCCCCHHHHHHHhc-------
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FG-TYVESMAGDASNKKFLKTALR------- 161 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~-~~v~~v~~D~~d~~~~~~~~~------- 161 (305)
..+|+++||||+|+||++++++|+++|++|++++|++++..+. .+ .++.++.+|++|.++++++++
T Consensus 8 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 87 (262)
T 3pk0_A 8 LQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEEFG 87 (262)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence 4569999999999999999999999999999999997663321 12 468999999999988887765
Q ss_pred CccEEEECCcch--------------------------H----hhhhhhcCCCEEEEEcccccc-cCCCCcccccchHH-
Q 021928 162 GVRSIICPSEGF--------------------------I----SNAGSLKGVQHVILLSQLSVY-RGSGGIQALMKGNA- 209 (305)
Q Consensus 162 ~~d~Vi~~~~g~--------------------------~----~~~a~~~gv~~~V~iSS~~~~-~~~~~~~~~~~~~~- 209 (305)
++|++||+++.. + ....++.+..+||++||..+. .+.+....|..++.
T Consensus 88 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~Y~asK~a 167 (262)
T 3pk0_A 88 GIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGSGRVVLTSSITGPITGYPGWSHYGATKAA 167 (262)
T ss_dssp CCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCEEEEECCSBTTTBCCTTCHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCCCCCChhhHHHHHH
Confidence 789999884310 1 112334577899999998765 44444445544332
Q ss_pred -HHHHHHHHHHHHhCCCCEEEEecCCcccCCC--CCcce--eeecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEEEE
Q 021928 210 -RKLAEQDESMLMASGIPYTIIRTGVLQNTPG--GKQGF--QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEV 282 (305)
Q Consensus 210 -~~~~~~aE~~l~~~gi~~tilRPg~l~~~~~--~~~~~--~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~v 282 (305)
..+.+.....+...+++++.|+||++..... ..... .+........+.+++|+|++++.++.... ..|+++++
T Consensus 168 ~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v~~L~s~~~~~itG~~i~v 247 (262)
T 3pk0_A 168 QLGFMRTAAIELAPHKITVNAIMPGNIMTEGLLENGEEYIASMARSIPAGALGTPEDIGHLAAFLATKEAGYITGQAIAV 247 (262)
T ss_dssp HHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHTTCHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEE
T ss_pred HHHHHHHHHHHHHhhCcEEEEEEeCcCcCccccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCcCCEEEE
Confidence 1112222233445799999999999643210 11000 01111223456789999999999997543 46899999
Q ss_pred ecCC
Q 021928 283 VNGE 286 (305)
Q Consensus 283 ~~g~ 286 (305)
.+|.
T Consensus 248 dGG~ 251 (262)
T 3pk0_A 248 DGGQ 251 (262)
T ss_dssp STTT
T ss_pred CCCe
Confidence 9875
|
| >3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.76 E-value=1e-17 Score=147.71 Aligned_cols=190 Identities=14% Similarity=0.106 Sum_probs=132.4
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh------hcCCCcEEeecCCCCHHHHHHHhc-------Cc
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTALR-------GV 163 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~------~~~~~v~~v~~D~~d~~~~~~~~~-------~~ 163 (305)
.+|+++||||+|+||++++++|+++|++|+++.|++++..+ ..+.++.++.+|++|.++++++++ .+
T Consensus 4 ~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 83 (247)
T 3lyl_A 4 NEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAENLAI 83 (247)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTTCCC
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 46899999999999999999999999999999999765332 124578999999999988887765 47
Q ss_pred cEEEECCcch--------------------------Hhh----hhhhcCCCEEEEEcccccccCCCCcccccchHHH--H
Q 021928 164 RSIICPSEGF--------------------------ISN----AGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--K 211 (305)
Q Consensus 164 d~Vi~~~~g~--------------------------~~~----~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~--~ 211 (305)
|++||+++.. +.. ...+.+..+||++||..++.+.+....|..++.. .
T Consensus 84 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~ 163 (247)
T 3lyl_A 84 DILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKRWGRIISIGSVVGSAGNPGQTNYCAAKAGVIG 163 (247)
T ss_dssp SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHHHHHH
T ss_pred CEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCCCCcHHHHHHHHHHHH
Confidence 9999884310 111 1233556799999999887766665566544321 1
Q ss_pred HHHHHHHHHHhCCCCEEEEecCCcccCCCCC-cc---eeeecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEEEEecC
Q 021928 212 LAEQDESMLMASGIPYTIIRTGVLQNTPGGK-QG---FQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVNG 285 (305)
Q Consensus 212 ~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~-~~---~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~v~~g 285 (305)
+.+.....+...+++++.++||++....... .. ..+........+.+++|+|++++.++.+.. ..|+++++.+|
T Consensus 164 ~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~~~~~~tG~~i~vdgG 243 (247)
T 3lyl_A 164 FSKSLAYEVASRNITVNVVAPGFIATDMTDKLTDEQKSFIATKIPSGQIGEPKDIAAAVAFLASEEAKYITGQTLHVNGG 243 (247)
T ss_dssp HHHHHHHHHGGGTEEEEEEEECSBCCTTTTTSCHHHHHHHHTTSTTCCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred HHHHHHHHHHHcCeEEEEEeeCcEecccchhccHHHHHHHhhcCCCCCCcCHHHHHHHHHHHhCCCcCCccCCEEEECCC
Confidence 2222223345679999999999965432211 00 001122233567899999999999996543 46899999877
Q ss_pred C
Q 021928 286 E 286 (305)
Q Consensus 286 ~ 286 (305)
.
T Consensus 244 ~ 244 (247)
T 3lyl_A 244 M 244 (247)
T ss_dssp S
T ss_pred E
Confidence 4
|
| >3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A | Back alignment and structure |
|---|
Probab=99.76 E-value=7.9e-18 Score=150.90 Aligned_cols=192 Identities=14% Similarity=0.129 Sum_probs=128.9
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh---hcCCCcEEeecCCCCHHHHHHHhc-------Ccc
Q 021928 95 PEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALR-------GVR 164 (305)
Q Consensus 95 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~---~~~~~v~~v~~D~~d~~~~~~~~~-------~~d 164 (305)
+..+|+|+||||+|+||++++++|+++|++|+++.|+.++..+ ..+.++.++.+|++|.++++++++ ++|
T Consensus 24 ~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD 103 (266)
T 3grp_A 24 KLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLGKDVFVFSANLSDRKSIKQLAEVAEREMEGID 103 (266)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHHHHHHHTSCC
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEeecCCHHHHHHHHHHHHHHcCCCC
Confidence 3456899999999999999999999999999999998766433 345678999999999988887775 789
Q ss_pred EEEECCcch------------------------------HhhhhhhcCCCEEEEEcccccccCCCCcccccchHHH--HH
Q 021928 165 SIICPSEGF------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--KL 212 (305)
Q Consensus 165 ~Vi~~~~g~------------------------------~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~--~~ 212 (305)
++|++++.. +...+++.+..+||++||..++.+..+...|..++.. .+
T Consensus 104 ~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~~ 183 (266)
T 3grp_A 104 ILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRRYGRIINITSIVGVVGNPGQTNYCAAKAGLIGF 183 (266)
T ss_dssp EEEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCC-------CHHHHHHHHHHHHHH
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEECCHHHcCCCCCchhHHHHHHHHHHH
Confidence 999884310 1112344567899999999887765555555543321 12
Q ss_pred HHHHHHHHHhCCCCEEEEecCCcccCCC-C-Cc--ceeeecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEEEEecCC
Q 021928 213 AEQDESMLMASGIPYTIIRTGVLQNTPG-G-KQ--GFQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVNGE 286 (305)
Q Consensus 213 ~~~aE~~l~~~gi~~tilRPg~l~~~~~-~-~~--~~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~v~~g~ 286 (305)
.+.....+...+++++.|+||++..... . .. ...+........+.+++|+|++++.++.+.. ..|+++++.+|.
T Consensus 184 ~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~r~~~~edvA~~v~~L~s~~~~~itG~~i~vdGG~ 263 (266)
T 3grp_A 184 SKALAQEIASRNITVNCIAPGFIKSAMTDKLNEKQKEAIMAMIPMKRMGIGEEIAFATVYLASDEAAYLTGQTLHINGGM 263 (266)
T ss_dssp HHHHHHHHGGGTEEEEEEEECSBCSHHHHTCCHHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred HHHHHHHhhhhCcEEEEEeeCcCCCchhhccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccCCEEEECCCe
Confidence 2222233455799999999999643211 0 00 0001122233456789999999999997543 368999998874
|
| >4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A | Back alignment and structure |
|---|
Probab=99.76 E-value=2e-17 Score=148.23 Aligned_cols=192 Identities=14% Similarity=0.119 Sum_probs=131.3
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhh-------hhcCCCcEEeecCCCCHHHHHHHhc------
Q 021928 95 PEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM-------ESFGTYVESMAGDASNKKFLKTALR------ 161 (305)
Q Consensus 95 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~-------~~~~~~v~~v~~D~~d~~~~~~~~~------ 161 (305)
+..+|+|+||||+|+||++++++|+++|++|+++.|+..... +..+.++.++.+|++|.+++.++++
T Consensus 26 ~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 105 (271)
T 4iin_A 26 QFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIVQSD 105 (271)
T ss_dssp CCSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhc
Confidence 345689999999999999999999999999999999654321 1224578999999999988887775
Q ss_pred -CccEEEECCcch------------------------------HhhhhhhcCCCEEEEEcccccccCCCCcccccchHHH
Q 021928 162 -GVRSIICPSEGF------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR 210 (305)
Q Consensus 162 -~~d~Vi~~~~g~------------------------------~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~ 210 (305)
++|++|++++.. +....++.+..+||++||..++.+..+...|..++..
T Consensus 106 g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a 185 (271)
T 4iin_A 106 GGLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSRFGSVVNVASIIGERGNMGQTNYSASKGG 185 (271)
T ss_dssp SSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHHH
T ss_pred CCCCEEEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEechhhcCCCCCchHhHHHHHH
Confidence 789999884310 1112334567899999999887766666566544321
Q ss_pred --HHHHHHHHHHHhCCCCEEEEecCCcccCCCCC-c---ceeeecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEEEE
Q 021928 211 --KLAEQDESMLMASGIPYTIIRTGVLQNTPGGK-Q---GFQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEV 282 (305)
Q Consensus 211 --~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~-~---~~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~v 282 (305)
.+.+.....+...++.++.++||++....... . ...+........+.+++|+|++++.++.++. ..|+++++
T Consensus 186 ~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~p~dvA~~i~~l~s~~~~~itG~~i~v 265 (271)
T 4iin_A 186 MIAMSKSFAYEGALRNIRFNSVTPGFIETDMNANLKDELKADYVKNIPLNRLGSAKEVAEAVAFLLSDHSSYITGETLKV 265 (271)
T ss_dssp HHHHHHHHHHHHHTTTEEEEEEEECSBCCC------------CGGGCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEE
T ss_pred HHHHHHHHHHHHHHhCcEEEEEEeCcccCCchhhhcHHHHHHHHhcCCcCCCcCHHHHHHHHHHHhCCCcCCCcCCEEEe
Confidence 11122222344579999999999965432111 0 0011112233457799999999999997543 46899999
Q ss_pred ecCC
Q 021928 283 VNGE 286 (305)
Q Consensus 283 ~~g~ 286 (305)
.+|-
T Consensus 266 dGG~ 269 (271)
T 4iin_A 266 NGGL 269 (271)
T ss_dssp STTS
T ss_pred CCCe
Confidence 8774
|
| >2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} | Back alignment and structure |
|---|
Probab=99.76 E-value=5.4e-18 Score=148.89 Aligned_cols=190 Identities=13% Similarity=0.126 Sum_probs=127.2
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEE-EcCcchhhhh------cCCCcEE-eecCCCCHHHHHHHhc-------C
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKAL-VKDKRNAMES------FGTYVES-MAGDASNKKFLKTALR-------G 162 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~-~R~~~~~~~~------~~~~v~~-v~~D~~d~~~~~~~~~-------~ 162 (305)
+|+|+||||+|+||++++++|+++|++|+++ .|++++..+. .+.++.. +.+|++|.++++++++ +
T Consensus 1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (245)
T 2ph3_A 1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEVLGG 80 (245)
T ss_dssp CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHHTC
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHhcCC
Confidence 4789999999999999999999999999998 7876553221 1345666 8999999988877754 7
Q ss_pred ccEEEECCcc----h--------------------------HhhhhhhcCCCEEEEEcccccccCCCCcccccchHH--H
Q 021928 163 VRSIICPSEG----F--------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA--R 210 (305)
Q Consensus 163 ~d~Vi~~~~g----~--------------------------~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~--~ 210 (305)
+|+|||+++. . +...+++.+.++||++||..++.+......|...+. .
T Consensus 81 ~d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~ 160 (245)
T 2ph3_A 81 LDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKARFGRIVNITSVVGILGNPGQANYVASKAGLI 160 (245)
T ss_dssp CCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCSSBHHHHHHHHHHH
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCEEEEEeChhhccCCCCCcchHHHHHHHH
Confidence 8999988431 0 112234567889999999877655444445544332 1
Q ss_pred HHHHHHHHHHHhCCCCEEEEecCCcccCCC-C-Ccce--eeecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEEEEec
Q 021928 211 KLAEQDESMLMASGIPYTIIRTGVLQNTPG-G-KQGF--QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVN 284 (305)
Q Consensus 211 ~~~~~aE~~l~~~gi~~tilRPg~l~~~~~-~-~~~~--~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~v~~ 284 (305)
.+.+.....+...+++++++|||++..... . .... .+........+++++|+|++++.++.++. ..++.|++.+
T Consensus 161 ~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~g 240 (245)
T 2ph3_A 161 GFTRAVAKEYAQRGITVNAVAPGFIETEMTERLPQEVKEAYLKQIPAGRFGRPEEVAEAVAFLVSEKAGYITGQTLCVDG 240 (245)
T ss_dssp HHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHHHHHHHHHTCTTCSCBCHHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred HHHHHHHHHHHHcCeEEEEEEEEeecCcchhhcCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcccccccCCEEEECC
Confidence 112222233445699999999999643211 0 0000 00011122457899999999999997643 3589999988
Q ss_pred CCc
Q 021928 285 GEE 287 (305)
Q Consensus 285 g~~ 287 (305)
|..
T Consensus 241 g~~ 243 (245)
T 2ph3_A 241 GLT 243 (245)
T ss_dssp TCS
T ss_pred CCC
Confidence 753
|
| >2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.76 E-value=1.1e-17 Score=150.77 Aligned_cols=191 Identities=15% Similarity=0.146 Sum_probs=128.5
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh---cC--CCcEEeecCCCCHHHHHHHhc-------Cc
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FG--TYVESMAGDASNKKFLKTALR-------GV 163 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~~--~~v~~v~~D~~d~~~~~~~~~-------~~ 163 (305)
..+|+|+||||+|+||++++++|+++|++|++++|++++..+. +. .++.++.+|++|.++++++++ ++
T Consensus 27 l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 106 (276)
T 2b4q_A 27 LAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYGDCQAIPADLSSEAGARRLAQALGELSARL 106 (276)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTSSCEEECCCCTTSHHHHHHHHHHHHHHCSCC
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence 3468999999999999999999999999999999987653321 11 268889999999988887765 68
Q ss_pred cEEEECCcc----h--------------------------HhhhhhhcCC----CEEEEEcccccccCCCCcc-cccchH
Q 021928 164 RSIICPSEG----F--------------------------ISNAGSLKGV----QHVILLSQLSVYRGSGGIQ-ALMKGN 208 (305)
Q Consensus 164 d~Vi~~~~g----~--------------------------~~~~a~~~gv----~~~V~iSS~~~~~~~~~~~-~~~~~~ 208 (305)
|++|++++. . ....+++.+. ++||++||..++.+..... .|..++
T Consensus 107 D~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~~~~~~~~~~~Y~asK 186 (276)
T 2b4q_A 107 DILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGISAMGEQAYAYGPSK 186 (276)
T ss_dssp SEEEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGGTCCCCCSCTTHHHHH
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHHcCCCCCCccccHHHH
Confidence 999988431 0 0111223344 8999999998876544443 454433
Q ss_pred HH--HHHHHHHHHHHhCCCCEEEEecCCcccCCCCC--cc--eeeec--CCCCCCccCHHHHHHHHHHHhhCCC--CCCc
Q 021928 209 AR--KLAEQDESMLMASGIPYTIIRTGVLQNTPGGK--QG--FQFEE--GCAANGSLSKEDAAFICVEALESIP--QTGL 278 (305)
Q Consensus 209 ~~--~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~--~~--~~~~~--~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~ 278 (305)
.. .+.+.....+...+++++.|+||++....... .. ..+.. ......+.+++|+|++++.++.++. ..|+
T Consensus 187 ~a~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~~~~~~tG~ 266 (276)
T 2b4q_A 187 AALHQLSRMLAKELVGEHINVNVIAPGRFPSRMTRHIANDPQALEADSASIPMGRWGRPEEMAALAISLAGTAGAYMTGN 266 (276)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECCCCSTTTHHHHHCHHHHHHHHHTSTTSSCCCHHHHHHHHHHHHSGGGTTCCSC
T ss_pred HHHHHHHHHHHHHhcccCeEEEEEEeccCcCcchhhcchhHHHHHHhhcCCCCCCcCCHHHHHHHHHHHhCccccCCCCC
Confidence 21 11122223344579999999999965432211 00 00001 1222457899999999999997543 4689
Q ss_pred EEEEecCC
Q 021928 279 IFEVVNGE 286 (305)
Q Consensus 279 ~~~v~~g~ 286 (305)
++.+.+|.
T Consensus 267 ~i~vdGG~ 274 (276)
T 2b4q_A 267 VIPIDGGF 274 (276)
T ss_dssp EEEESTTT
T ss_pred EEEeCCCc
Confidence 99998763
|
| >2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A | Back alignment and structure |
|---|
Probab=99.76 E-value=1.2e-17 Score=149.37 Aligned_cols=184 Identities=9% Similarity=0.041 Sum_probs=126.7
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhc-------CccEEEEC
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR-------GVRSIICP 169 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~-------~~d~Vi~~ 169 (305)
.+|+||||||+|+||++++++|+++|++|++++|++++ +.++.++.+|++|.++++++++ ++|++|++
T Consensus 7 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-----~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lv~~ 81 (264)
T 2dtx_A 7 RDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG-----EAKYDHIECDVTNPDQVKASIDHIFKEYGSISVLVNN 81 (264)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC-----SCSSEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc-----CCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 45899999999999999999999999999999998754 3468899999999988887776 68999988
Q ss_pred Ccc----h--------------------------HhhhhhhcCCCEEEEEcccccccCCCCcccccchHHHH--HHHHHH
Q 021928 170 SEG----F--------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK--LAEQDE 217 (305)
Q Consensus 170 ~~g----~--------------------------~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~~--~~~~aE 217 (305)
++. . ....+++.+.++||++||..++.+......|..++... +.+...
T Consensus 82 Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la 161 (264)
T 2dtx_A 82 AGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQASIITKNASAYVTSKHAVIGLTKSIA 161 (264)
T ss_dssp CCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCchhccCCCCchhHHHHHHHHHHHHHHHH
Confidence 431 0 11112345678999999998877655555554433211 111111
Q ss_pred HHHHhCCCCEEEEecCCcccCCCC---------Cc----ce--eeecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEE
Q 021928 218 SMLMASGIPYTIIRTGVLQNTPGG---------KQ----GF--QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIF 280 (305)
Q Consensus 218 ~~l~~~gi~~tilRPg~l~~~~~~---------~~----~~--~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~ 280 (305)
..+... +++++|+||++...... .. .. .+........+++++|+|++++.++..+. ..|+.+
T Consensus 162 ~e~~~~-i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~s~~~~~~tG~~i 240 (264)
T 2dtx_A 162 LDYAPL-LRCNAVCPATIDTPLVRKAAELEVGSDPMRIEKKISEWGHEHPMQRIGKPQEVASAVAFLASREASFITGTCL 240 (264)
T ss_dssp HHHTTT-SEEEEEEECSBCSHHHHHHHHHHHCSCHHHHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred HHhcCC-cEEEEEEeCCCcCcchhhhhhcccccCchhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCCCCcEE
Confidence 222334 99999999996432110 00 00 00011122457899999999999997543 468999
Q ss_pred EEecCC
Q 021928 281 EVVNGE 286 (305)
Q Consensus 281 ~v~~g~ 286 (305)
++.+|.
T Consensus 241 ~vdGG~ 246 (264)
T 2dtx_A 241 YVDGGL 246 (264)
T ss_dssp EESTTG
T ss_pred EECCCc
Confidence 998874
|
| >2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.76 E-value=3.9e-18 Score=152.44 Aligned_cols=194 Identities=14% Similarity=0.143 Sum_probs=131.4
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh---hc-----CCCcEEeecCCCCHHHHHHHhc-------C
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SF-----GTYVESMAGDASNKKFLKTALR-------G 162 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~---~~-----~~~v~~v~~D~~d~~~~~~~~~-------~ 162 (305)
+++|+||||+|+||++++++|+++|++|++++|++++..+ .+ +.++.++.+|++|.+++.++++ .
T Consensus 7 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 86 (267)
T 2gdz_A 7 GKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFGR 86 (267)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHcCC
Confidence 4899999999999999999999999999999998765321 11 2357899999999988887775 4
Q ss_pred ccEEEECCcc-----h-----------------HhhhhhhcC---CCEEEEEcccccccCCCCcccccchHHH--HHHHH
Q 021928 163 VRSIICPSEG-----F-----------------ISNAGSLKG---VQHVILLSQLSVYRGSGGIQALMKGNAR--KLAEQ 215 (305)
Q Consensus 163 ~d~Vi~~~~g-----~-----------------~~~~a~~~g---v~~~V~iSS~~~~~~~~~~~~~~~~~~~--~~~~~ 215 (305)
+|++||+++. . +...+++.+ .++||++||..++.+......|..++.. .+.+.
T Consensus 87 id~lv~~Ag~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~ 166 (267)
T 2gdz_A 87 LDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTRS 166 (267)
T ss_dssp CCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHH
T ss_pred CCEEEECCCCCChhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccCCCCCCchHHHHHHHHHHHHHH
Confidence 6999988431 0 112233332 6799999999887765555555443321 11111
Q ss_pred --HHHHHHhCCCCEEEEecCCcccCCCCC--ccee------e----ecCCCCCCccCHHHHHHHHHHHhhCCCCCCcEEE
Q 021928 216 --DESMLMASGIPYTIIRTGVLQNTPGGK--QGFQ------F----EEGCAANGSLSKEDAAFICVEALESIPQTGLIFE 281 (305)
Q Consensus 216 --aE~~l~~~gi~~tilRPg~l~~~~~~~--~~~~------~----~~~~~~~~~Is~~DvA~~iv~~l~~~~~~~~~~~ 281 (305)
.+..+...++++++|+||++....... .... + ........+++++|+|++++.++.++...|++++
T Consensus 167 ~ala~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~v~~l~s~~~~~G~~~~ 246 (267)
T 2gdz_A 167 AALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPPLIANGLITLIEDDALNGAIMK 246 (267)
T ss_dssp HHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHHHHHHHCCBCHHHHHHHHHHHHHCTTCSSCEEE
T ss_pred HHHHHHhccCCcEEEEEecCcCcchhhhccccccccchhhhHHHHHHHHhccccCCCHHHHHHHHHHHhcCcCCCCcEEE
Confidence 123355689999999999964321000 0000 0 0000113468999999999999987777899999
Q ss_pred EecCCc-CHHH
Q 021928 282 VVNGEE-KVSD 291 (305)
Q Consensus 282 v~~g~~-s~~d 291 (305)
+.++.. ++.|
T Consensus 247 v~gg~~~~~~~ 257 (267)
T 2gdz_A 247 ITTSKGIHFQD 257 (267)
T ss_dssp EETTTEEEECC
T ss_pred ecCCCcccccC
Confidence 998763 4443
|
| >2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.75 E-value=7.6e-18 Score=144.19 Aligned_cols=167 Identities=17% Similarity=0.210 Sum_probs=118.4
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh---cCCCcEEeecCCCCHHHHHHHhc---CccEEEECCcc
Q 021928 99 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALR---GVRSIICPSEG 172 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~~~~v~~v~~D~~d~~~~~~~~~---~~d~Vi~~~~g 172 (305)
|+|+||||+|+||++++++|+++ +|++++|++++..+. ... +++.+|++|.+++.++++ ++|+|||+++.
T Consensus 1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~~~~~~--~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag~ 76 (207)
T 2yut_A 1 MRVLITGATGGLGGAFARALKGH--DLLLSGRRAGALAELAREVGA--RALPADLADELEAKALLEEAGPLDLLVHAVGK 76 (207)
T ss_dssp CEEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHHHHHTC--EECCCCTTSHHHHHHHHHHHCSEEEEEECCCC
T ss_pred CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHHHhccC--cEEEeeCCCHHHHHHHHHhcCCCCEEEECCCc
Confidence 58999999999999999999998 999999987654322 222 889999999999999988 89999988431
Q ss_pred --------------------------hHhhhhhhcCCCEEEEEcccccccCCCCcccccchHHH--HHHHHHHHHHHhCC
Q 021928 173 --------------------------FISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--KLAEQDESMLMASG 224 (305)
Q Consensus 173 --------------------------~~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~--~~~~~aE~~l~~~g 224 (305)
.+.+++++.+.++||++||..++.+..+...|...+.. .+.+.....+...+
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~g 156 (207)
T 2yut_A 77 AGRASVREAGRDLVEEMLAAHLLTAAFVLKHARFQKGARAVFFGAYPRYVQVPGFAAYAAAKGALEAYLEAARKELLREG 156 (207)
T ss_dssp CCCBCSCC---CHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCCHHHHSSTTBHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred CCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHhcCCcEEEEEcChhhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhC
Confidence 02233455667899999999888766555555443321 11122222234479
Q ss_pred CCEEEEecCCcccCCCCCcceeeecCCCCCCccCHHHHHHHHHHHhhCCCC
Q 021928 225 IPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQ 275 (305)
Q Consensus 225 i~~tilRPg~l~~~~~~~~~~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~~ 275 (305)
++++++|||++...... ..+.....+++++|+|++++.+++++..
T Consensus 157 i~v~~v~pg~v~t~~~~------~~~~~~~~~~~~~dva~~~~~~~~~~~~ 201 (207)
T 2yut_A 157 VHLVLVRLPAVATGLWA------PLGGPPKGALSPEEAARKVLEGLFREPV 201 (207)
T ss_dssp CEEEEECCCCBCSGGGG------GGTSCCTTCBCHHHHHHHHHHHHC--CC
T ss_pred CEEEEEecCcccCCCcc------ccCCCCCCCCCHHHHHHHHHHHHhCCCC
Confidence 99999999996533211 1122336789999999999999986543
|
| >1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G | Back alignment and structure |
|---|
Probab=99.75 E-value=7.1e-18 Score=148.14 Aligned_cols=188 Identities=15% Similarity=0.166 Sum_probs=126.1
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCCeEEEE-EcCcchhhh------hcCCCcEEeecCCCCHHHHHHHhc-------Ccc
Q 021928 99 DAVLVTDGDSDIGQMVILSLIVKRTRIKAL-VKDKRNAME------SFGTYVESMAGDASNKKFLKTALR-------GVR 164 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~-~R~~~~~~~------~~~~~v~~v~~D~~d~~~~~~~~~-------~~d 164 (305)
|+|+||||+|+||++++++|+++|++|+++ .|++++..+ ..+.++.++.+|++|.+++.++++ ++|
T Consensus 2 k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id 81 (244)
T 1edo_A 2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTID 81 (244)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCS
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence 789999999999999999999999999995 777654321 124568899999999999888776 689
Q ss_pred EEEECCcc----h----------------------Hhhh----hhhcCCCEEEEEcccccccCCCCcccccchHHH--HH
Q 021928 165 SIICPSEG----F----------------------ISNA----GSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--KL 212 (305)
Q Consensus 165 ~Vi~~~~g----~----------------------~~~~----a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~--~~ 212 (305)
+|||+++. . +..+ .++.+.++||++||..++.+......|...+.. .+
T Consensus 82 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~ 161 (244)
T 1edo_A 82 VVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGF 161 (244)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHHHHHHH
T ss_pred EEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCEEEEECChhhcCCCCCCccchhhHHHHHHH
Confidence 99988431 0 1111 223567899999998776555555455443321 11
Q ss_pred HHHHHHHHHhCCCCEEEEecCCcccCCC-C-Ccce--eeecCCCCCCccCHHHHHHHHHHHhhCCC---CCCcEEEEecC
Q 021928 213 AEQDESMLMASGIPYTIIRTGVLQNTPG-G-KQGF--QFEEGCAANGSLSKEDAAFICVEALESIP---QTGLIFEVVNG 285 (305)
Q Consensus 213 ~~~aE~~l~~~gi~~tilRPg~l~~~~~-~-~~~~--~~~~~~~~~~~Is~~DvA~~iv~~l~~~~---~~~~~~~v~~g 285 (305)
.+.....+...++++++++||++..... . .... .+........+++++|+|++++.++..+. ..|+.|++.+|
T Consensus 162 ~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~~G~~~~v~gG 241 (244)
T 1edo_A 162 SKTAAREGASRNINVNVVCPGFIASDMTAKLGEDMEKKILGTIPLGRTGQPENVAGLVEFLALSPAASYITGQAFTIDGG 241 (244)
T ss_dssp HHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCHHHHHHHHTSCTTCSCBCHHHHHHHHHHHHHCSGGGGCCSCEEEESTT
T ss_pred HHHHHHHhhhcCCEEEEEeeCccccchhhhcChHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCccCCcCCCEEEeCCC
Confidence 2222233445799999999999643211 0 0000 00011122457899999999999985443 35889999876
Q ss_pred C
Q 021928 286 E 286 (305)
Q Consensus 286 ~ 286 (305)
.
T Consensus 242 ~ 242 (244)
T 1edo_A 242 I 242 (244)
T ss_dssp T
T ss_pred c
Confidence 4
|
| >1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.75 E-value=1.1e-17 Score=148.45 Aligned_cols=189 Identities=13% Similarity=0.039 Sum_probs=128.6
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh---hcCCCcEEeecCCCCHHHHHHHhc-------CccEE
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALR-------GVRSI 166 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~---~~~~~v~~v~~D~~d~~~~~~~~~-------~~d~V 166 (305)
.+|+|+||||+|+||++++++|+++|++|++++|++++..+ .++.++.++.+|++|.++++++++ .+|++
T Consensus 5 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~l 84 (253)
T 1hxh_A 5 QGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNVL 84 (253)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCEE
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 45899999999999999999999999999999998765432 234568899999999988877765 46999
Q ss_pred EECCcc----h--------------------------HhhhhhhcCCCEEEEEcccccccCCCCcccccchHHH--HHHH
Q 021928 167 ICPSEG----F--------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--KLAE 214 (305)
Q Consensus 167 i~~~~g----~--------------------------~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~--~~~~ 214 (305)
||+++. . +...+++.+ ++||++||..++.+......|..++.. .+.+
T Consensus 85 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~ 163 (253)
T 1hxh_A 85 VNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG-GSIINMASVSSWLPIEQYAGYSASKAAVSALTR 163 (253)
T ss_dssp EECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC-EEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHH
T ss_pred EECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcC-CEEEEEcchhhcCCCCCCccHHHHHHHHHHHHH
Confidence 988431 0 111234456 899999999888765555555543321 1112
Q ss_pred HHHHHHHhC--CCCEEEEecCCcccCC-----CCCccee-eec---CCCCCCccCHHHHHHHHHHHhhCCC--CCCcEEE
Q 021928 215 QDESMLMAS--GIPYTIIRTGVLQNTP-----GGKQGFQ-FEE---GCAANGSLSKEDAAFICVEALESIP--QTGLIFE 281 (305)
Q Consensus 215 ~aE~~l~~~--gi~~tilRPg~l~~~~-----~~~~~~~-~~~---~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~ 281 (305)
.....+... ++++++|+||++.... ....... +.. ......+.+++|+|++++.++.++. ..|+.++
T Consensus 164 ~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~~~~tG~~~~ 243 (253)
T 1hxh_A 164 AAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGVSKEMVLHDPKLNRAGRAYMPERIAQLVLFLASDESSVMSGSELH 243 (253)
T ss_dssp HHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTTCCHHHHBCBTTTBTTCCEECHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred HHHHHhhhcCCCeEEEEEEeCCccCchhhhccchhhhHHHHhhhhccCccCCCCCHHHHHHHHHHHcCccccCCCCcEEE
Confidence 222223344 8999999999854221 1000000 101 1122346799999999999997653 4689999
Q ss_pred EecCC
Q 021928 282 VVNGE 286 (305)
Q Consensus 282 v~~g~ 286 (305)
+.+|.
T Consensus 244 vdgG~ 248 (253)
T 1hxh_A 244 ADNSI 248 (253)
T ss_dssp ESSSC
T ss_pred ECCCc
Confidence 98775
|
| >3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} | Back alignment and structure |
|---|
Probab=99.75 E-value=4.6e-18 Score=145.27 Aligned_cols=160 Identities=14% Similarity=0.101 Sum_probs=113.8
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcC---ccEEEECCcc---
Q 021928 99 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRG---VRSIICPSEG--- 172 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~---~d~Vi~~~~g--- 172 (305)
|+|+||||+|+||++++++|+ +|++|++++|+++ .+.+|++|.+++++++++ +|+|||+++.
T Consensus 4 M~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~-----------~~~~D~~~~~~~~~~~~~~~~~d~vi~~ag~~~~ 71 (202)
T 3d7l_A 4 MKILLIGASGTLGSAVKERLE-KKAEVITAGRHSG-----------DVTVDITNIDSIKKMYEQVGKVDAIVSATGSATF 71 (202)
T ss_dssp CEEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS-----------SEECCTTCHHHHHHHHHHHCCEEEEEECCCCCCC
T ss_pred cEEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc-----------ceeeecCCHHHHHHHHHHhCCCCEEEECCCCCCC
Confidence 589999999999999999999 9999999999863 478999999999888875 7999998431
Q ss_pred --h---------------------Hhhhhhhc---CCCEEEEEcccccccCCCCcccccchHHHHHHHHHHHHHH-----
Q 021928 173 --F---------------------ISNAGSLK---GVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLM----- 221 (305)
Q Consensus 173 --~---------------------~~~~a~~~---gv~~~V~iSS~~~~~~~~~~~~~~~~~~~~~~~~aE~~l~----- 221 (305)
. +.+++... + ++||++||..++.+......|... |...|.+.+
T Consensus 72 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~iv~~sS~~~~~~~~~~~~Y~~s-----K~~~~~~~~~~~~e 145 (202)
T 3d7l_A 72 SPLTELTPEKNAVTISSKLGGQINLVLLGIDSLNDK-GSFTLTTGIMMEDPIVQGASAAMA-----NGAVTAFAKSAAIE 145 (202)
T ss_dssp CCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEEE-EEEEEECCGGGTSCCTTCHHHHHH-----HHHHHHHHHHHTTS
T ss_pred CChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhccC-CEEEEEcchhhcCCCCccHHHHHH-----HHHHHHHHHHHHHH
Confidence 0 11222222 3 699999998877655444444332 222333332
Q ss_pred -hCCCCEEEEecCCcccCCCCCcceeeecCCCCCCccCHHHHHHHHHHHhhCCCCCCcEEEE
Q 021928 222 -ASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEV 282 (305)
Q Consensus 222 -~~gi~~tilRPg~l~~~~~~~~~~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~~~~~~~~v 282 (305)
..+++++++|||++...... .........+++++|+|++++.++. ....|++|++
T Consensus 146 ~~~gi~v~~v~pg~v~~~~~~-----~~~~~~~~~~~~~~dva~~~~~~~~-~~~~G~~~~v 201 (202)
T 3d7l_A 146 MPRGIRINTVSPNVLEESWDK-----LEPFFEGFLPVPAAKVARAFEKSVF-GAQTGESYQV 201 (202)
T ss_dssp CSTTCEEEEEEECCBGGGHHH-----HGGGSTTCCCBCHHHHHHHHHHHHH-SCCCSCEEEE
T ss_pred ccCCeEEEEEecCccCCchhh-----hhhhccccCCCCHHHHHHHHHHhhh-ccccCceEec
Confidence 24899999999996543210 0111233568999999999998884 4456788886
|
| >3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} | Back alignment and structure |
|---|
Probab=99.75 E-value=1.6e-17 Score=147.78 Aligned_cols=193 Identities=11% Similarity=0.092 Sum_probs=134.1
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh------hcCCCcEEeecCCCCHHHHHHHhc-------
Q 021928 95 PEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTALR------- 161 (305)
Q Consensus 95 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~------~~~~~v~~v~~D~~d~~~~~~~~~------- 161 (305)
+..+|+++||||+|+||++++++|+++|++|+++.|+.+...+ ..+.++.++.+|++|.++++++++
T Consensus 9 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 88 (256)
T 3gaf_A 9 HLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQFG 88 (256)
T ss_dssp CCTTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 3456999999999999999999999999999999998765332 124578999999999988887775
Q ss_pred CccEEEECCcch-------------------------Hhh----hhhhcCCCEEEEEcccccccCCCCcccccchHHH--
Q 021928 162 GVRSIICPSEGF-------------------------ISN----AGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR-- 210 (305)
Q Consensus 162 ~~d~Vi~~~~g~-------------------------~~~----~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~-- 210 (305)
++|++||+++.. +.. ..++.+..+||++||..++.+......|..++..
T Consensus 89 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~ 168 (256)
T 3gaf_A 89 KITVLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAGENTNVRMASYGSSKAAVN 168 (256)
T ss_dssp CCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTCCCTTCHHHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHHcCCCCCchHHHHHHHHHH
Confidence 789999884310 111 1234566799999999888776666666554321
Q ss_pred HHHHHHHHHHHhCCCCEEEEecCCcccCCC----CCc-ceeeecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEEEEe
Q 021928 211 KLAEQDESMLMASGIPYTIIRTGVLQNTPG----GKQ-GFQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVV 283 (305)
Q Consensus 211 ~~~~~aE~~l~~~gi~~tilRPg~l~~~~~----~~~-~~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~v~ 283 (305)
.+.+.....+...+++++.++||++..... ... ...+........+.+++|+|++++.++.... ..|+++++.
T Consensus 169 ~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~~~~L~s~~~~~itG~~i~vd 248 (256)
T 3gaf_A 169 HLTRNIAFDVGPMGIRVNAIAPGAIKTDALATVLTPEIERAMLKHTPLGRLGEAQDIANAALFLCSPAAAWISGQVLTVS 248 (256)
T ss_dssp HHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHCCHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred HHHHHHHHHHhhhCcEEEEEEEccccCchhhhccCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCCcccCccCCEEEEC
Confidence 112222233445789999999999643211 000 0001112233456799999999999997543 468999999
Q ss_pred cCCc
Q 021928 284 NGEE 287 (305)
Q Consensus 284 ~g~~ 287 (305)
+|..
T Consensus 249 gG~~ 252 (256)
T 3gaf_A 249 GGGV 252 (256)
T ss_dssp TTSC
T ss_pred CCcc
Confidence 8863
|
| >2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=99.75 E-value=1e-17 Score=149.02 Aligned_cols=186 Identities=16% Similarity=0.141 Sum_probs=124.4
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhc-------CccEEEE
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR-------GVRSIIC 168 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~-------~~d~Vi~ 168 (305)
.++|+|+||||+|+||++++++|+++|++|+++.|++++.. .+.++.+|++|.++++++++ .+|++|+
T Consensus 19 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~-----~~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~lv~ 93 (253)
T 2nm0_A 19 HMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPE-----GFLAVKCDITDTEQVEQAYKEIEETHGPVEVLIA 93 (253)
T ss_dssp -CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT-----TSEEEECCTTSHHHHHHHHHHHHHHTCSCSEEEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhhc-----cceEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 34689999999999999999999999999999999875433 27889999999988877765 4699998
Q ss_pred CCcch--------------------------Hh----hhhhhcCCCEEEEEcccccccCCCCcccccchHH--HHHHHHH
Q 021928 169 PSEGF--------------------------IS----NAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA--RKLAEQD 216 (305)
Q Consensus 169 ~~~g~--------------------------~~----~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~--~~~~~~a 216 (305)
+++.. +. ..+++.+.++||++||..++.+......|...+. ..+.+..
T Consensus 94 nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~l 173 (253)
T 2nm0_A 94 NAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAKKGRVVLISSVVGLLGSAGQANYAASKAGLVGFARSL 173 (253)
T ss_dssp ECSCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCCCCcHHHHHHHHHHHHHHHHH
Confidence 73310 11 1223456789999999877655433334433322 1112222
Q ss_pred HHHHHhCCCCEEEEecCCcccCCCCC--cce--eeecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEEEEecCC
Q 021928 217 ESMLMASGIPYTIIRTGVLQNTPGGK--QGF--QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVNGE 286 (305)
Q Consensus 217 E~~l~~~gi~~tilRPg~l~~~~~~~--~~~--~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~v~~g~ 286 (305)
...+...++++++|+||++....... ... .+........+++++|+|++++.++.++. ..|+.+.+.+|.
T Consensus 174 a~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~i~~l~s~~~~~~tG~~i~vdGG~ 249 (253)
T 2nm0_A 174 ARELGSRNITFNVVAPGFVDTDMTKVLTDEQRANIVSQVPLGRYARPEEIAATVRFLASDDASYITGAVIPVDGGL 249 (253)
T ss_dssp HHHHCSSSEEEEEEEECSBCC---------CHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred HHHhhhcCeEEEEEEeCcCcCcchhhcCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCcCcEEEECCcc
Confidence 23344578999999999864332111 000 00011122357899999999999997643 468999998774
|
| >3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=4.1e-18 Score=150.64 Aligned_cols=191 Identities=15% Similarity=0.167 Sum_probs=127.7
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcC-cchhhhh------cCCCcEEeecCCCCHHHHHHHhc-------C
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKD-KRNAMES------FGTYVESMAGDASNKKFLKTALR-------G 162 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~-~~~~~~~------~~~~v~~v~~D~~d~~~~~~~~~-------~ 162 (305)
.+|+|+||||+|+||++++++|+++|++|++++|+ +++..+. .+.++.++.+|++|.+++.++++ +
T Consensus 6 ~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 85 (258)
T 3afn_B 6 KGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFVAKFGG 85 (258)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSS
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 45899999999999999999999999999999998 5543221 14568899999999999888887 8
Q ss_pred ccEEEECCcc------h---------------------Hhh----hhhhcC--C---CEEEEEccccccc-CCCCccccc
Q 021928 163 VRSIICPSEG------F---------------------ISN----AGSLKG--V---QHVILLSQLSVYR-GSGGIQALM 205 (305)
Q Consensus 163 ~d~Vi~~~~g------~---------------------~~~----~a~~~g--v---~~~V~iSS~~~~~-~~~~~~~~~ 205 (305)
+|+|||+++. . +.. ...+.+ . .+||++||..++. +..+...|.
T Consensus 86 id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~Y~ 165 (258)
T 3afn_B 86 IDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTGGGPGAGLYG 165 (258)
T ss_dssp CSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHHHCCCTTCHHHH
T ss_pred CCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhccCCCCCchHHH
Confidence 9999998431 0 000 111222 2 7999999987765 444444454
Q ss_pred chHHH--HHHHHHHHHHHhCCCCEEEEecCCcccCCCCC--cce--eeecCCCCCCccCHHHHHHHHHHHhhCC---CCC
Q 021928 206 KGNAR--KLAEQDESMLMASGIPYTIIRTGVLQNTPGGK--QGF--QFEEGCAANGSLSKEDAAFICVEALESI---PQT 276 (305)
Q Consensus 206 ~~~~~--~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~--~~~--~~~~~~~~~~~Is~~DvA~~iv~~l~~~---~~~ 276 (305)
.++.. .+.+.....+...+++++++|||++....... ... .+........+++++|+|++++.++.++ ...
T Consensus 166 ~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~~ 245 (258)
T 3afn_B 166 AAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAFHADKTQDVRDRISNGIPMGRFGTAEEMAPAFLFFASHLASGYIT 245 (258)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSGGGTTCCHHHHHHHHTTCTTCSCBCGGGTHHHHHHHHCHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHhhcccCeEEEEEeCCCcccccccccCHHHHHHHhccCCCCcCCCHHHHHHHHHHHhCcchhcccc
Confidence 43321 11111122234469999999999965332111 000 0111222345789999999999999754 236
Q ss_pred CcEEEEecCCc
Q 021928 277 GLIFEVVNGEE 287 (305)
Q Consensus 277 ~~~~~v~~g~~ 287 (305)
++.|++.+|..
T Consensus 246 G~~~~v~gg~~ 256 (258)
T 3afn_B 246 GQVLDINGGQY 256 (258)
T ss_dssp SEEEEESTTSS
T ss_pred CCEEeECCCcc
Confidence 89999988753
|
| >3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} | Back alignment and structure |
|---|
Probab=99.75 E-value=2.5e-17 Score=146.54 Aligned_cols=189 Identities=16% Similarity=0.132 Sum_probs=128.8
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcch--hhhh------cCCCcEEeecCCCCHHHHHHHhc-------C
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN--AMES------FGTYVESMAGDASNKKFLKTALR-------G 162 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~--~~~~------~~~~v~~v~~D~~d~~~~~~~~~-------~ 162 (305)
+|+++||||+|+||++++++|+++|++|+++.|+++. ..+. .+.++.++.+|++|.+++.++++ +
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 81 (258)
T 3a28_C 2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKLGG 81 (258)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHTC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 4899999999999999999999999999999998765 3221 14468899999999988887775 7
Q ss_pred ccEEEECCcc----h----------------------Hh----hhhhhcCC-CEEEEEcccccccCCCCcccccchHHH-
Q 021928 163 VRSIICPSEG----F----------------------IS----NAGSLKGV-QHVILLSQLSVYRGSGGIQALMKGNAR- 210 (305)
Q Consensus 163 ~d~Vi~~~~g----~----------------------~~----~~a~~~gv-~~~V~iSS~~~~~~~~~~~~~~~~~~~- 210 (305)
+|++|++++. . +. ..+++.+. ++||++||..++.+......|..++..
T Consensus 82 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~ 161 (258)
T 3a28_C 82 FDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINAASIAAIQGFPILSAYSTTKFAV 161 (258)
T ss_dssp CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGTSCCTTCHHHHHHHHHH
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEEECcchhccCCCCchhHHHHHHHH
Confidence 8999988431 0 11 11233466 899999999887665555555443321
Q ss_pred -HHHHHHHHHHHhCCCCEEEEecCCcccCCC------------C--Ccce-eeecCCCCCCccCHHHHHHHHHHHhhCCC
Q 021928 211 -KLAEQDESMLMASGIPYTIIRTGVLQNTPG------------G--KQGF-QFEEGCAANGSLSKEDAAFICVEALESIP 274 (305)
Q Consensus 211 -~~~~~aE~~l~~~gi~~tilRPg~l~~~~~------------~--~~~~-~~~~~~~~~~~Is~~DvA~~iv~~l~~~~ 274 (305)
.+.+.....+...++++++|+||++..... . .... .+........+.+++|+|++++.++.++.
T Consensus 162 ~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~~~ 241 (258)
T 3a28_C 162 RGLTQAAAQELAPKGHTVNAYAPGIVGTGMWEQIDAELSKINGKPIGENFKEYSSSIALGRPSVPEDVAGLVSFLASENS 241 (258)
T ss_dssp HHHHHHHHHHHGGGTCEEEEEEECCBCSHHHHHHHHHHHHHHCCCTTHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGG
T ss_pred HHHHHHHHHHHHhhCeEEEEEECCccCChhhhhhhhhhccccCCchHHHHHHHHhcCCCCCccCHHHHHHHHHHHhCccc
Confidence 112222233456799999999999642210 0 0000 00011122347899999999999997543
Q ss_pred --CCCcEEEEecCC
Q 021928 275 --QTGLIFEVVNGE 286 (305)
Q Consensus 275 --~~~~~~~v~~g~ 286 (305)
..|+.+.+.+|.
T Consensus 242 ~~~tG~~i~vdGG~ 255 (258)
T 3a28_C 242 NYVTGQVMLVDGGM 255 (258)
T ss_dssp TTCCSCEEEESSSS
T ss_pred CCCCCCEEEECCCE
Confidence 468999998774
|
| >1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.75 E-value=7.2e-18 Score=153.51 Aligned_cols=202 Identities=11% Similarity=0.111 Sum_probs=133.5
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh------cCC---CcEEeecCCCCHHHHHHHhc-----
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGT---YVESMAGDASNKKFLKTALR----- 161 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~~---~v~~v~~D~~d~~~~~~~~~----- 161 (305)
..+|+++||||+|+||++++++|+++|++|++++|++++..+. .+. ++.++.+|++|.+++.++++
T Consensus 24 l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 103 (297)
T 1xhl_A 24 FSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAK 103 (297)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHHh
Confidence 3458999999999999999999999999999999997653321 122 68899999999988887765
Q ss_pred --CccEEEECCc-----c--h---------------------Hh----hhhhhcCCCEEEEEcccccccCC-CCcccccc
Q 021928 162 --GVRSIICPSE-----G--F---------------------IS----NAGSLKGVQHVILLSQLSVYRGS-GGIQALMK 206 (305)
Q Consensus 162 --~~d~Vi~~~~-----g--~---------------------~~----~~a~~~gv~~~V~iSS~~~~~~~-~~~~~~~~ 206 (305)
++|++|++++ . . +. ...++.+ ++||++||..++.+. .+...|..
T Consensus 104 ~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-g~IV~isS~~~~~~~~~~~~~Y~a 182 (297)
T 1xhl_A 104 FGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK-GEIVNVSSIVAGPQAHSGYPYYAC 182 (297)
T ss_dssp HSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGSSSCCTTSHHHHH
T ss_pred cCCCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CEEEEEcCchhccCCCCCcchHHH
Confidence 7899998743 1 1 01 1122345 799999999887654 44445544
Q ss_pred hHHH--HHHHHHHHHHHhCCCCEEEEecCCcccCCCCCc-----------ce--eeecCCCCCCccCHHHHHHHHHHHhh
Q 021928 207 GNAR--KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQ-----------GF--QFEEGCAANGSLSKEDAAFICVEALE 271 (305)
Q Consensus 207 ~~~~--~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~~-----------~~--~~~~~~~~~~~Is~~DvA~~iv~~l~ 271 (305)
++.. .+.+.....+...++++++|+||++........ .. .+........+.+++|+|++++.++.
T Consensus 183 sKaa~~~l~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~l~s 262 (297)
T 1xhl_A 183 AKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGKPEEIANIIVFLAD 262 (297)
T ss_dssp HHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcCccccccccccccccchHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC
Confidence 3321 112222233456799999999999643211000 00 00011122356899999999999996
Q ss_pred CC---CCCCcEEEEecCCc-CHHHHHHHHHH
Q 021928 272 SI---PQTGLIFEVVNGEE-KVSDWKKCFSR 298 (305)
Q Consensus 272 ~~---~~~~~~~~v~~g~~-s~~d~~~~~~~ 298 (305)
.+ ...|+.+.+.+|.. ...+....+.+
T Consensus 263 ~~~~~~itG~~i~vdGG~~~~~~~~~~~~~~ 293 (297)
T 1xhl_A 263 RNLSSYIIGQSIVADGGSTLVMGMQTHDLMS 293 (297)
T ss_dssp HHHHTTCCSCEEEESTTGGGCCGGGGSCHHH
T ss_pred CcccCCccCcEEEECCCccccccccccchhh
Confidence 54 35689999998753 34443333333
|
| >2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.75 E-value=1.1e-17 Score=147.86 Aligned_cols=190 Identities=14% Similarity=0.111 Sum_probs=127.4
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcC-CCcEEeecCCCCHHHHHHHh---cCccEEEECCcc
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG-TYVESMAGDASNKKFLKTAL---RGVRSIICPSEG 172 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~-~~v~~v~~D~~d~~~~~~~~---~~~d~Vi~~~~g 172 (305)
.+|+|+||||+|+||++++++|+++|++|++++|++++..+... .++.++.+|++|.+++++++ .++|++|++++.
T Consensus 5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~lv~~Ag~ 84 (246)
T 2ag5_A 5 DGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQTRVLDVTKKKQIDQFANEVERLDVLFNVAGF 84 (246)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGGSTTEEEEECCTTCHHHHHHHHHHCSCCSEEEECCCC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhccCceEEEeeCCCHHHHHHHHHHhCCCCEEEECCcc
Confidence 45899999999999999999999999999999999766443321 25889999999998887664 578999988431
Q ss_pred ----h----------------------Hhhh----hhhcCCCEEEEEcccccccCCC-CcccccchHHH--HHHHHHHHH
Q 021928 173 ----F----------------------ISNA----GSLKGVQHVILLSQLSVYRGSG-GIQALMKGNAR--KLAEQDESM 219 (305)
Q Consensus 173 ----~----------------------~~~~----a~~~gv~~~V~iSS~~~~~~~~-~~~~~~~~~~~--~~~~~aE~~ 219 (305)
. +..+ +++.+.++||++||..++.+.. ....|..++.. .+.+.....
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e 164 (246)
T 2ag5_A 85 VHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLTKSVAAD 164 (246)
T ss_dssp CCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCTTBHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechHhCcCCCCCCccHHHHHHHHHHHHHHHHHH
Confidence 0 1111 2345678999999988765543 44445433321 111222223
Q ss_pred HHhCCCCEEEEecCCcccCCCCC--------cce--eeecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEEEEecCC
Q 021928 220 LMASGIPYTIIRTGVLQNTPGGK--------QGF--QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVNGE 286 (305)
Q Consensus 220 l~~~gi~~tilRPg~l~~~~~~~--------~~~--~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~v~~g~ 286 (305)
+...++++++|+||++....... ... .+........+.+++|+|++++.++..+. ..|+.+.+.+|.
T Consensus 165 ~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~v~~l~s~~~~~~tG~~i~vdgG~ 243 (246)
T 2ag5_A 165 FIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTGRFATAEEIAMLCVYLASDESAYVTGNPVIIDGGW 243 (246)
T ss_dssp HGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCTTSSCEEHHHHHHHHHHHHSGGGTTCCSCEEEECTTG
T ss_pred hhhcCcEEEEEeeCcCcCcchhhhhhcccCcHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCc
Confidence 44579999999999964321000 000 00011122356799999999999996543 468999998774
|
| >3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} | Back alignment and structure |
|---|
Probab=99.75 E-value=6.7e-17 Score=143.66 Aligned_cols=192 Identities=13% Similarity=0.081 Sum_probs=127.9
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh---hcCCCcEEeecCCCCHHHHHHHhc-------Ccc
Q 021928 95 PEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALR-------GVR 164 (305)
Q Consensus 95 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~---~~~~~v~~v~~D~~d~~~~~~~~~-------~~d 164 (305)
+..+++|+||||+|+||++++++|+++|++|++++|++++..+ ..+..+.++.+|++|.++++++++ .+|
T Consensus 6 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id 85 (261)
T 3n74_A 6 SLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIGDAALAVAADISKEADVDAAVEAALSKFGKVD 85 (261)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred cCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHhcCCCC
Confidence 3456899999999999999999999999999999999876433 345678999999999988887775 679
Q ss_pred EEEECCcc-----h----------------------Hhh----hhhhc----CCCEEEEEcccccccCCCCcccccchHH
Q 021928 165 SIICPSEG-----F----------------------ISN----AGSLK----GVQHVILLSQLSVYRGSGGIQALMKGNA 209 (305)
Q Consensus 165 ~Vi~~~~g-----~----------------------~~~----~a~~~----gv~~~V~iSS~~~~~~~~~~~~~~~~~~ 209 (305)
++||+++. . +.. ..++. +..+||++||..++.+......|..+++
T Consensus 86 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asKa 165 (261)
T 3n74_A 86 ILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGRPRPNLAWYNATKG 165 (261)
T ss_dssp EEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTTSCCTTCHHHHHHHH
T ss_pred EEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhcCCCCCccHHHHHHH
Confidence 99988331 0 001 11222 1457999999988876666555654432
Q ss_pred --HHHHHHHHHHHHhCCCCEEEEecCCcccCCCC------Ccc--eeeecCCCCCCccCHHHHHHHHHHHhhCCC--CCC
Q 021928 210 --RKLAEQDESMLMASGIPYTIIRTGVLQNTPGG------KQG--FQFEEGCAANGSLSKEDAAFICVEALESIP--QTG 277 (305)
Q Consensus 210 --~~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~------~~~--~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~ 277 (305)
..+.+.....+...++.++.++||++...... ... ..+........+++++|+|++++.++.... ..|
T Consensus 166 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~itG 245 (261)
T 3n74_A 166 WVVSVTKALAIELAPAKIRVVALNPVAGETPLLTTFMGEDSEEIRKKFRDSIPMGRLLKPDDLAEAAAFLCSPQASMITG 245 (261)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEEC-------------------------CTTSSCCCHHHHHHHHHHHTSGGGTTCCS
T ss_pred HHHHHHHHHHHHhhhcCcEEEEEecCcccChhhhhhcccCcHHHHHHHhhcCCcCCCcCHHHHHHHHHHHcCCcccCcCC
Confidence 11222222334557999999999995432210 000 011112233467899999999999996433 468
Q ss_pred cEEEEecCC
Q 021928 278 LIFEVVNGE 286 (305)
Q Consensus 278 ~~~~v~~g~ 286 (305)
+++++.+|.
T Consensus 246 ~~i~vdgG~ 254 (261)
T 3n74_A 246 VALDVDGGR 254 (261)
T ss_dssp CEEEESTTT
T ss_pred cEEEecCCc
Confidence 999999875
|
| >1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.75 E-value=3.7e-17 Score=143.47 Aligned_cols=178 Identities=19% Similarity=0.151 Sum_probs=116.4
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCC--CeEEEEEcCcchhhhhc---CCCcEEeecCCCCHHHHHHHhc---------Cc
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRNAMESF---GTYVESMAGDASNKKFLKTALR---------GV 163 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g--~~V~~~~R~~~~~~~~~---~~~v~~v~~D~~d~~~~~~~~~---------~~ 163 (305)
+++|+||||+|+||++++++|+++| ++|++++|++++..+.. +.++.++.+|++|.+++.++++ ++
T Consensus 3 ~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~~i 82 (250)
T 1yo6_A 3 PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDGL 82 (250)
T ss_dssp CSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGGCC
T ss_pred CCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHhccCCceEEEEeecCCHHHHHHHHHHHHHhcCCCCC
Confidence 5899999999999999999999999 99999999976643221 3478999999999998888776 89
Q ss_pred cEEEECCc--c---h----------------------Hhhh----hhhc------C-----CCEEEEEcccccccCC---
Q 021928 164 RSIICPSE--G---F----------------------ISNA----GSLK------G-----VQHVILLSQLSVYRGS--- 198 (305)
Q Consensus 164 d~Vi~~~~--g---~----------------------~~~~----a~~~------g-----v~~~V~iSS~~~~~~~--- 198 (305)
|+|||+++ . . +..+ .++. + ..+||++||..++.+.
T Consensus 83 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~ 162 (250)
T 1yo6_A 83 SLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTS 162 (250)
T ss_dssp CEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTTCCS
T ss_pred cEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCccccCCccc
Confidence 99998832 1 0 1111 1222 4 7899999998776543
Q ss_pred ----CCcccccchHHH--HHHHHHHHHHHhCCCCEEEEecCCcccCCCCCcceeeecCCCCCCccCHHHHHHHHHHHhhC
Q 021928 199 ----GGIQALMKGNAR--KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALES 272 (305)
Q Consensus 199 ----~~~~~~~~~~~~--~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~~~~~~~~~~~~~~~Is~~DvA~~iv~~l~~ 272 (305)
.+...|..++.. .+.+.....+...++.+++|+||++....... ..+++++|+|+.++.++..
T Consensus 163 ~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-----------~~~~~~~~~a~~~~~~~~~ 231 (250)
T 1yo6_A 163 GSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGK-----------NAALTVEQSTAELISSFNK 231 (250)
T ss_dssp TTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC------------------------HHHHHHHHHHHTT
T ss_pred ccccCCccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcCCceecCCCCC-----------CCCCCHHHHHHHHHHHHhc
Confidence 233333332211 11111111223458999999999975432211 2468999999999999987
Q ss_pred CC--CCCcEEEEecCC
Q 021928 273 IP--QTGLIFEVVNGE 286 (305)
Q Consensus 273 ~~--~~~~~~~v~~g~ 286 (305)
+. ..++.+.+.++.
T Consensus 232 ~~~~~~G~~~~~~g~~ 247 (250)
T 1yo6_A 232 LDNSHNGRFFMRNLKP 247 (250)
T ss_dssp CCGGGTTCEEETTEEE
T ss_pred ccccCCCeEEEECCcC
Confidence 65 356777665544
|
| >3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.75 E-value=8e-17 Score=145.00 Aligned_cols=191 Identities=14% Similarity=0.060 Sum_probs=130.3
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcC-------------cchhh------hhcCCCcEEeecCCCCHHHH
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKD-------------KRNAM------ESFGTYVESMAGDASNKKFL 156 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~-------------~~~~~------~~~~~~v~~v~~D~~d~~~~ 156 (305)
..+|+++||||+|+||++++++|+++|++|++++|+ .++.. ...+.++.++.+|++|.+++
T Consensus 13 l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v 92 (280)
T 3pgx_A 13 LQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDAAL 92 (280)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHH
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHH
Confidence 456999999999999999999999999999999983 22211 12245788999999999888
Q ss_pred HHHhc-------CccEEEECCcc----h----------------------Hhh----hhhhcC-CCEEEEEcccccccCC
Q 021928 157 KTALR-------GVRSIICPSEG----F----------------------ISN----AGSLKG-VQHVILLSQLSVYRGS 198 (305)
Q Consensus 157 ~~~~~-------~~d~Vi~~~~g----~----------------------~~~----~a~~~g-v~~~V~iSS~~~~~~~ 198 (305)
+++++ ++|++|++++. . +.. ..++.+ ..+||++||..++.+.
T Consensus 93 ~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~ 172 (280)
T 3pgx_A 93 RELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLKAT 172 (280)
T ss_dssp HHHHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCC
T ss_pred HHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEcchhhccCC
Confidence 87765 78999988431 0 111 122333 5789999999888776
Q ss_pred CCcccccchHHH--HHHHHHHHHHHhCCCCEEEEecCCcccCCCCC--------------cceeeecCCCCCCccCHHHH
Q 021928 199 GGIQALMKGNAR--KLAEQDESMLMASGIPYTIIRTGVLQNTPGGK--------------QGFQFEEGCAANGSLSKEDA 262 (305)
Q Consensus 199 ~~~~~~~~~~~~--~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~--------------~~~~~~~~~~~~~~Is~~Dv 262 (305)
.....|..++.. .+.+.....+...+++++.|+||++....... ..... .......+.+++|+
T Consensus 173 ~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~r~~~p~dv 251 (280)
T 3pgx_A 173 PGNGHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMIEPEAMMEIFARHPSFVHSFPP-MPVQPNGFMTADEV 251 (280)
T ss_dssp TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCHHHHHHHHHHCGGGGGGSCC-BTTBCSSCBCHHHH
T ss_pred CCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccCcccchhhhhhhhhcCchhhhhhhh-cccCCCCCCCHHHH
Confidence 666666544321 12222223345589999999999965432211 00000 11112357899999
Q ss_pred HHHHHHHhhCCC--CCCcEEEEecCCc
Q 021928 263 AFICVEALESIP--QTGLIFEVVNGEE 287 (305)
Q Consensus 263 A~~iv~~l~~~~--~~~~~~~v~~g~~ 287 (305)
|++++.++.+.. ..|+++++.+|..
T Consensus 252 A~~v~~L~s~~~~~itG~~i~vdGG~~ 278 (280)
T 3pgx_A 252 ADVVAWLAGDGSGTLTGTQIPVDKGAL 278 (280)
T ss_dssp HHHHHHHHSGGGTTCSSCEEEESTTGG
T ss_pred HHHHHHHhCccccCCCCCEEEECCCcc
Confidence 999999997544 4689999998753
|
| >3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.75 E-value=8.4e-17 Score=146.65 Aligned_cols=179 Identities=16% Similarity=0.104 Sum_probs=120.9
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh------cCCCcEEeecCCCCHHHHHHHhc-------C
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------G 162 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~~~v~~v~~D~~d~~~~~~~~~-------~ 162 (305)
..+++||||||+|+||++++++|+++|++|++++|+.++..+. .+.++.++.+|++|.+++.++++ +
T Consensus 29 l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 108 (301)
T 3tjr_A 29 FDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLLGG 108 (301)
T ss_dssp STTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhCCC
Confidence 3468999999999999999999999999999999998663321 24578999999999998887775 7
Q ss_pred ccEEEECCcc----h----------------------Hhh----hhhhcC-CCEEEEEcccccccCCCCcccccchHHH-
Q 021928 163 VRSIICPSEG----F----------------------ISN----AGSLKG-VQHVILLSQLSVYRGSGGIQALMKGNAR- 210 (305)
Q Consensus 163 ~d~Vi~~~~g----~----------------------~~~----~a~~~g-v~~~V~iSS~~~~~~~~~~~~~~~~~~~- 210 (305)
+|++|++++. . +.. ...+.+ ..+||++||..++.+......|..++..
T Consensus 109 id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~ 188 (301)
T 3tjr_A 109 VDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVPNAGLGTYGVAKYGV 188 (301)
T ss_dssp CSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCTTBHHHHHHHHHH
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCCCchHHHHHHHHH
Confidence 8999988431 0 111 123334 5799999999888776666666554321
Q ss_pred -HHHHHHHHHHHhCCCCEEEEecCCcccCCCC----------C----cceeeecCCCCCCccCHHHHHHHHHHHhhCCC
Q 021928 211 -KLAEQDESMLMASGIPYTIIRTGVLQNTPGG----------K----QGFQFEEGCAANGSLSKEDAAFICVEALESIP 274 (305)
Q Consensus 211 -~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~----------~----~~~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~ 274 (305)
.+.+.....+...++.++.|+||++...... . ....+........+++++|+|+.++.+++.+.
T Consensus 189 ~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~i~~~l~~~~ 267 (301)
T 3tjr_A 189 VGLAETLAREVKPNGIGVSVLCPMVVETKLVSNSERIRGADYGMSATPEGAFGPLPTQDESVSADDVARLTADAILANR 267 (301)
T ss_dssp HHHHHHHHHHHGGGTEEEEEECCSCCCSSHHHHHHHHC----------------------CCCHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHhcccCcEEEEEECCccccccccccccccchhhccccChhhhccccccccCCCCHHHHHHHHHHHHhcCC
Confidence 1222222334567999999999996432110 0 00001111122457899999999999998653
|
| >3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} | Back alignment and structure |
|---|
Probab=99.74 E-value=6.8e-17 Score=144.64 Aligned_cols=190 Identities=12% Similarity=0.083 Sum_probs=129.8
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcch-hhh------hcCCCcEEeecCCCCHHHHHHHhc-------C
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-AME------SFGTYVESMAGDASNKKFLKTALR-------G 162 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~-~~~------~~~~~v~~v~~D~~d~~~~~~~~~-------~ 162 (305)
.+++++||||+|+||++++++|+++|++|+++.|+... ..+ ..+.++.++.+|++|.++++++++ .
T Consensus 24 ~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 103 (269)
T 3gk3_A 24 AKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLADFGK 103 (269)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred cCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 45899999999999999999999999999999854432 211 124578999999999988887765 7
Q ss_pred ccEEEECCcc----h--------------------------HhhhhhhcCCCEEEEEcccccccCCCCcccccchHHH--
Q 021928 163 VRSIICPSEG----F--------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR-- 210 (305)
Q Consensus 163 ~d~Vi~~~~g----~--------------------------~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~-- 210 (305)
+|++|++++. . +....++.+..+||++||..++.+..+...|..++..
T Consensus 104 id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~ 183 (269)
T 3gk3_A 104 VDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNGSRGAFGQANYASAKAGIH 183 (269)
T ss_dssp CSEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTBHHHHHHHHHHH
T ss_pred CCEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEeCChhhccCCCCcchHHHHHHHHH
Confidence 8999988431 0 0111234566899999999887766665566544321
Q ss_pred HHHHHHHHHHHhCCCCEEEEecCCcccCCCCCc--ce---eeecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEEEEe
Q 021928 211 KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQ--GF---QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVV 283 (305)
Q Consensus 211 ~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~~--~~---~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~v~ 283 (305)
.+.+.....+...+++++.++||++........ .. .+........+.+++|+|++++.++.... ..|+++++.
T Consensus 184 ~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~dvA~~v~~L~s~~~~~itG~~i~vd 263 (269)
T 3gk3_A 184 GFTKTLALETAKRGITVNTVSPGYLATAMVEAVPQDVLEAKILPQIPVGRLGRPDEVAALIAFLCSDDAGFVTGADLAIN 263 (269)
T ss_dssp HHHHHHHHHHGGGTEEEEEEEECSBCCTTTTC-------CCSGGGCTTSSCBCHHHHHHHHHHHTSTTCTTCCSCEEEES
T ss_pred HHHHHHHHHhhhcCCEEEEEecCcccchhhhhhchhHHHHHhhhcCCcCCccCHHHHHHHHHHHhCCCcCCeeCcEEEEC
Confidence 122222233455799999999999654322110 00 11111223456789999999999997654 468999999
Q ss_pred cCC
Q 021928 284 NGE 286 (305)
Q Consensus 284 ~g~ 286 (305)
+|.
T Consensus 264 gG~ 266 (269)
T 3gk3_A 264 GGM 266 (269)
T ss_dssp TTS
T ss_pred CCE
Confidence 875
|
| >3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} | Back alignment and structure |
|---|
Probab=99.74 E-value=5.5e-17 Score=146.87 Aligned_cols=192 Identities=15% Similarity=0.118 Sum_probs=125.0
Q ss_pred CcCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh---cCCCcEEeecCCCCHHHHHHHhc---CccEEE
Q 021928 94 FPEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALR---GVRSII 167 (305)
Q Consensus 94 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~~~~v~~v~~D~~d~~~~~~~~~---~~d~Vi 167 (305)
++..+|+|+||||+|+||++++++|+++|++|++++|++++..+. ++.++.++.+|++|.++++++++ ++|++|
T Consensus 12 ~~l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~iD~lv 91 (291)
T 3rd5_A 12 PSFAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMAGQVEVRELDLQDLSSVRRFADGVSGADVLI 91 (291)
T ss_dssp CCCTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTSSSEEEEEECCTTCHHHHHHHHHTCCCEEEEE
T ss_pred cCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCeeEEEcCCCCHHHHHHHHHhcCCCCEEE
Confidence 345679999999999999999999999999999999998764432 34578999999999999998887 569999
Q ss_pred ECCcch------------------------HhhhhhhcCCCEEEEEcccccccCCC-------------CcccccchHHH
Q 021928 168 CPSEGF------------------------ISNAGSLKGVQHVILLSQLSVYRGSG-------------GIQALMKGNAR 210 (305)
Q Consensus 168 ~~~~g~------------------------~~~~a~~~gv~~~V~iSS~~~~~~~~-------------~~~~~~~~~~~ 210 (305)
|+++-. +..++.....++||++||..++.+.. +...|..++..
T Consensus 92 ~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~riv~isS~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a 171 (291)
T 3rd5_A 92 NNAGIMAVPYALTVDGFESQIGTNHLGHFALTNLLLPRLTDRVVTVSSMAHWPGRINLEDLNWRSRRYSPWLAYSQSKLA 171 (291)
T ss_dssp ECCCCCSCCCCBCTTSCBHHHHHHTHHHHHHHHHHGGGEEEEEEEECCGGGTTCCCCSSCTTCSSSCCCHHHHHHHHHHH
T ss_pred ECCcCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeEeechhhccCCCCcccccccccCCCCcchHHHHHHH
Confidence 884310 22233334456999999988764321 11223222211
Q ss_pred --HHHHHHHHHHHhCC--CCEEEEecCCcccCCCCCcc--e--eeecCCCCCCccCHHHHHHHHHHHhhCCCCCCcEEEE
Q 021928 211 --KLAEQDESMLMASG--IPYTIIRTGVLQNTPGGKQG--F--QFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEV 282 (305)
Q Consensus 211 --~~~~~aE~~l~~~g--i~~tilRPg~l~~~~~~~~~--~--~~~~~~~~~~~Is~~DvA~~iv~~l~~~~~~~~~~~v 282 (305)
.+.+.....+...+ +.++.++||++......... . .+..........+++|+|+.++.++.++...|+.+.+
T Consensus 172 ~~~~~~~la~e~~~~g~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~l~~~~~~~G~~~~v 251 (291)
T 3rd5_A 172 NLLFTSELQRRLTAAGSPLRALAAHPGYSHTNLQGASGRKLGDALMSAATRVVATDADFGARQTLYAASQDLPGDSFVGP 251 (291)
T ss_dssp HHHHHHHHHHHHHHTTCCCEEEEECCSGGGSCC--------------------CHHHHHHHHHHHHHHHSCCCTTCEEEE
T ss_pred HHHHHHHHHHHHhhCCCCEEEEEeeCCCCccccccccchHHHHHHHHHHHHHHhCCHHHHHHHHHHHHcCCCCCCceeCC
Confidence 11111222234455 99999999996543221110 0 0000011112235899999999999987677888988
Q ss_pred ecC
Q 021928 283 VNG 285 (305)
Q Consensus 283 ~~g 285 (305)
.+|
T Consensus 252 dgG 254 (291)
T 3rd5_A 252 RFG 254 (291)
T ss_dssp TTS
T ss_pred ccc
Confidence 654
|
| >3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} | Back alignment and structure |
|---|
Probab=99.74 E-value=5.2e-17 Score=146.29 Aligned_cols=192 Identities=13% Similarity=0.119 Sum_probs=129.4
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh------hcCCCcEEeecCCCCHHHHHHHhc-------
Q 021928 95 PEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTALR------- 161 (305)
Q Consensus 95 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~------~~~~~v~~v~~D~~d~~~~~~~~~------- 161 (305)
+..+|++|||||+|+||++++++|+++|++|++++|+.+...+ ..+.++.++.+|++|.++++++++
T Consensus 29 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g 108 (276)
T 3r1i_A 29 DLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGELG 108 (276)
T ss_dssp CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 4456999999999999999999999999999999998766332 124578999999999998888776
Q ss_pred CccEEEECCcch--------------------------Hhh----hhhhcC-CCEEEEEcccccccCC--CCcccccchH
Q 021928 162 GVRSIICPSEGF--------------------------ISN----AGSLKG-VQHVILLSQLSVYRGS--GGIQALMKGN 208 (305)
Q Consensus 162 ~~d~Vi~~~~g~--------------------------~~~----~a~~~g-v~~~V~iSS~~~~~~~--~~~~~~~~~~ 208 (305)
++|++|++++.. +.. ...+.+ -.+||++||..++... .....|..++
T Consensus 109 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~~~~~~~~~~Y~asK 188 (276)
T 3r1i_A 109 GIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIINIPQQVSHYCTSK 188 (276)
T ss_dssp CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCCSSCCHHHHHHH
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhcccCCCCCcchHHHHH
Confidence 789999884310 011 122333 3689999998776432 2333444333
Q ss_pred H--HHHHHHHHHHHHhCCCCEEEEecCCcccCCCCCc-ce--eeecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEEE
Q 021928 209 A--RKLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQ-GF--QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFE 281 (305)
Q Consensus 209 ~--~~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~~-~~--~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~ 281 (305)
. ..+.+.....+...+++++.|+||++........ .. .+........+.+++|+|++++.++.+.. ..|++++
T Consensus 189 aa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~fL~s~~~~~itG~~i~ 268 (276)
T 3r1i_A 189 AAVVHLTKAMAVELAPHQIRVNSVSPGYIRTELVEPLADYHALWEPKIPLGRMGRPEELTGLYLYLASAASSYMTGSDIV 268 (276)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTTGGGGGGHHHHGGGSTTSSCBCGGGSHHHHHHHHSGGGTTCCSCEEE
T ss_pred HHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCccccchHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCccCcEEE
Confidence 2 1111222233445799999999999654322110 00 01111222456789999999999997543 4689999
Q ss_pred EecCC
Q 021928 282 VVNGE 286 (305)
Q Consensus 282 v~~g~ 286 (305)
+.+|.
T Consensus 269 vdGG~ 273 (276)
T 3r1i_A 269 IDGGY 273 (276)
T ss_dssp ESTTT
T ss_pred ECcCc
Confidence 98875
|
| >3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
Probab=99.74 E-value=4.9e-17 Score=144.42 Aligned_cols=178 Identities=13% Similarity=0.067 Sum_probs=117.2
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh------cCCCcEEeecCCCCHHHHHHHhc------Cc
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR------GV 163 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~~~v~~v~~D~~d~~~~~~~~~------~~ 163 (305)
..+++++||||+|+||++++++|+++|++|++++|++++..+. .+.++.++.+|++|.+++.++++ ++
T Consensus 5 ~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~g~i 84 (252)
T 3h7a_A 5 PRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAHAPL 84 (252)
T ss_dssp CCSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHSCE
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhhCCc
Confidence 3468999999999999999999999999999999998764322 24578999999999999888776 67
Q ss_pred cEEEECCcc----h--------------------------HhhhhhhcCCCEEEEEcccccccCCCCcccccchHH--HH
Q 021928 164 RSIICPSEG----F--------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA--RK 211 (305)
Q Consensus 164 d~Vi~~~~g----~--------------------------~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~--~~ 211 (305)
|++|++++. . +....++.+..+||++||..++.+..+...|..++. ..
T Consensus 85 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~ 164 (252)
T 3h7a_A 85 EVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHGQGKIFFTGATASLRGGSGFAAFASAKFGLRA 164 (252)
T ss_dssp EEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTCCCTTCHHHHHHHHHHHH
T ss_pred eEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHHcCCCCCCccHHHHHHHHHH
Confidence 999988431 0 111234456679999999988877666656655432 11
Q ss_pred HHHHHHHHHHhCCCCE-EEEecCCcccCCCCC-cce---eeecCCCCCCccCHHHHHHHHHHHhhCCC
Q 021928 212 LAEQDESMLMASGIPY-TIIRTGVLQNTPGGK-QGF---QFEEGCAANGSLSKEDAAFICVEALESIP 274 (305)
Q Consensus 212 ~~~~aE~~l~~~gi~~-tilRPg~l~~~~~~~-~~~---~~~~~~~~~~~Is~~DvA~~iv~~l~~~~ 274 (305)
+.+.....+...++.+ +.+.||++....... ... .+... ....+++++|+|++++.++.++.
T Consensus 165 l~~~la~e~~~~gi~v~n~v~PG~v~T~~~~~~~~~~~~~~~~~-~~~~~~~pedvA~~~~~l~s~~~ 231 (252)
T 3h7a_A 165 VAQSMARELMPKNIHVAHLIIDSGVDTAWVRERREQMFGKDALA-NPDLLMPPAAVAGAYWQLYQQPK 231 (252)
T ss_dssp HHHHHHHHHGGGTEEEEEEEEC----------------------------CCHHHHHHHHHHHHHCCG
T ss_pred HHHHHHHHhhhcCCEEEEEecCCccCChhhhccchhhhhhhhhc-CCccCCCHHHHHHHHHHHHhCch
Confidence 2222223345678999 899999964332111 000 01111 12238899999999999998665
|
| >3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} | Back alignment and structure |
|---|
Probab=99.74 E-value=1.9e-17 Score=149.27 Aligned_cols=190 Identities=14% Similarity=0.137 Sum_probs=130.2
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh------cCCCcEEeecCCCCHHHHHHHhc-------Cc
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GV 163 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~~~v~~v~~D~~d~~~~~~~~~-------~~ 163 (305)
.+|++|||||+|+||++++++|+++|++|+++.|++++..+. .+.++.++.+|++|.+++.++++ .+
T Consensus 23 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 102 (279)
T 3sju_A 23 RPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERFGPI 102 (279)
T ss_dssp --CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHCSC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 358999999999999999999999999999999997653321 24578999999999988877665 67
Q ss_pred cEEEECCcch--------------------------Hhhh------hhhcCCCEEEEEcccccccCCCCcccccchHHH-
Q 021928 164 RSIICPSEGF--------------------------ISNA------GSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR- 210 (305)
Q Consensus 164 d~Vi~~~~g~--------------------------~~~~------a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~- 210 (305)
|++|++++.. +..+ .++.+..+||++||..++.+......|..++..
T Consensus 103 d~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~asKaa~ 182 (279)
T 3sju_A 103 GILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGGKQGVMYAAPYTASKHGV 182 (279)
T ss_dssp CEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHHH
T ss_pred cEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcCCcEEEEECChhhccCCCCChhHHHHHHHH
Confidence 9999884310 1111 233566899999999888776666566544321
Q ss_pred -HHHHHHHHHHHhCCCCEEEEecCCcccCCC--------C----C-cc--eeeecCCCCCCccCHHHHHHHHHHHhhCCC
Q 021928 211 -KLAEQDESMLMASGIPYTIIRTGVLQNTPG--------G----K-QG--FQFEEGCAANGSLSKEDAAFICVEALESIP 274 (305)
Q Consensus 211 -~~~~~aE~~l~~~gi~~tilRPg~l~~~~~--------~----~-~~--~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~ 274 (305)
.+.+.....+...+++++.|+||++..... . . .. ..+........+.+++|+|++++.++.+..
T Consensus 183 ~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~a 262 (279)
T 3sju_A 183 VGFTKSVGFELAKTGITVNAVCPGYVETPMAERVREGYARHWGVTEQEVHERFNAKIPLGRYSTPEEVAGLVGYLVTDAA 262 (279)
T ss_dssp HHHHHHHHHHTGGGTEEEEEEEESSBCSHHHHHHHHSCCSSSCCCHHHHHHHHHTTCTTSSCBCHHHHHHHHHHHTSSGG
T ss_pred HHHHHHHHHHHHhhCcEEEEEeeCcccchHHHHHHhhhhhcccCChHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCccc
Confidence 112222223345789999999999642210 0 0 00 001112223456789999999999997654
Q ss_pred --CCCcEEEEecCC
Q 021928 275 --QTGLIFEVVNGE 286 (305)
Q Consensus 275 --~~~~~~~v~~g~ 286 (305)
..|++++|.+|.
T Consensus 263 ~~itG~~i~vdGG~ 276 (279)
T 3sju_A 263 ASITAQALNVCGGL 276 (279)
T ss_dssp GGCCSCEEEESTTC
T ss_pred cCcCCcEEEECCCc
Confidence 468999999875
|
| >3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.74 E-value=8e-17 Score=145.59 Aligned_cols=191 Identities=16% Similarity=0.179 Sum_probs=127.6
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh------cCCCcEEeecCCCCHHHHHHHhc-------C
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------G 162 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~~~v~~v~~D~~d~~~~~~~~~-------~ 162 (305)
..++++|||||+|+||++++++|+++|++|+++.|+.+...+. .+.++.++.+|++|.++++++++ +
T Consensus 26 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 105 (283)
T 3v8b_A 26 QPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVLKFGH 105 (283)
T ss_dssp -CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 3458999999999999999999999999999999997653321 23468899999999988877765 7
Q ss_pred ccEEEECCcc-----h----------------------Hhhh----hhhcCCCEEEEEccccccc--CCCCcccccchHH
Q 021928 163 VRSIICPSEG-----F----------------------ISNA----GSLKGVQHVILLSQLSVYR--GSGGIQALMKGNA 209 (305)
Q Consensus 163 ~d~Vi~~~~g-----~----------------------~~~~----a~~~gv~~~V~iSS~~~~~--~~~~~~~~~~~~~ 209 (305)
+|++|++++. . +..+ .++.+..+||++||..++. +..+...|..++.
T Consensus 106 iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~~~Y~asKa 185 (283)
T 3v8b_A 106 LDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRGGGAIVVVSSINGTRTFTTPGATAYTATKA 185 (283)
T ss_dssp CCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCSTTCHHHHHHHH
T ss_pred CCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCceEEEEcChhhccCCCCCCchHHHHHHH
Confidence 8999988431 0 1111 2456678999999988765 4444444544332
Q ss_pred H--HHHHHHHHHHHhCCCCEEEEecCCcccCCCCCcc----------eee-ecCCCC--CCccCHHHHHHHHHHHhhCCC
Q 021928 210 R--KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQG----------FQF-EEGCAA--NGSLSKEDAAFICVEALESIP 274 (305)
Q Consensus 210 ~--~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~~~----------~~~-~~~~~~--~~~Is~~DvA~~iv~~l~~~~ 274 (305)
. .+.+.....+...++.++.|+||++......... ... ...... ..+.+++|+|++++.++.+..
T Consensus 186 a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~r~~~pedvA~~v~fL~s~~a 265 (283)
T 3v8b_A 186 AQVAIVQQLALELGKHHIRVNAVCPGAIETNISDNTKLRHEEETAIPVEWPKGQVPITDGQPGRSEDVAELIRFLVSERA 265 (283)
T ss_dssp HHHHHHHHHHHHTTTTTEEEEEEEECSBSSCTTCCTTBCCHHHHSCCCBCTTCSCGGGTTCCBCHHHHHHHHHHHTSGGG
T ss_pred HHHHHHHHHHHHhCccCcEEEEEEeCCCcCCcccccccccchhhhhhhhhhhhcCccccCCCCCHHHHHHHHHHHcCccc
Confidence 1 1111111223347899999999996533221100 000 000111 345688999999999997543
Q ss_pred --CCCcEEEEecCC
Q 021928 275 --QTGLIFEVVNGE 286 (305)
Q Consensus 275 --~~~~~~~v~~g~ 286 (305)
..|+++++.+|.
T Consensus 266 ~~itG~~i~vdGG~ 279 (283)
T 3v8b_A 266 RHVTGSPVWIDGGQ 279 (283)
T ss_dssp TTCCSCEEEESTTH
T ss_pred cCCcCCEEEECcCc
Confidence 468999998774
|
| >3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=1.2e-16 Score=141.78 Aligned_cols=188 Identities=13% Similarity=0.107 Sum_probs=128.8
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhc--CCCcEEeecCCCCHHHHHHHh-------cCccEEE
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF--GTYVESMAGDASNKKFLKTAL-------RGVRSII 167 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~--~~~v~~v~~D~~d~~~~~~~~-------~~~d~Vi 167 (305)
|.|+|+||||+++||++++++|++.|++|++++|+++...+.. ..++..+++|++|.+++++++ ..+|++|
T Consensus 1 MnK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iDiLV 80 (247)
T 3ged_A 1 MNRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKERPNLFYFHGDVADPLTLKKFVEYAMEKLQRIDVLV 80 (247)
T ss_dssp -CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEE
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 4589999999999999999999999999999999987644332 346889999999988877655 3679999
Q ss_pred ECCcc----h--------------------------HhhhhhhcCCCEEEEEcccccccCCCCcccccchHH--HHHHHH
Q 021928 168 CPSEG----F--------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA--RKLAEQ 215 (305)
Q Consensus 168 ~~~~g----~--------------------------~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~--~~~~~~ 215 (305)
++++. . ....+++.+ .++|.+||..+..+.+....|..++. ..+.+.
T Consensus 81 NNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~-G~IInisS~~~~~~~~~~~~Y~asKaal~~ltk~ 159 (247)
T 3ged_A 81 NNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNK-GRIINIASTRAFQSEPDSEAYASAKGGIVALTHA 159 (247)
T ss_dssp ECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHH
T ss_pred ECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CcEEEEeecccccCCCCCHHHHHHHHHHHHHHHH
Confidence 87431 0 011123334 69999999988877666666655442 222222
Q ss_pred HHHHHHhCCCCEEEEecCCcccCCCCCcceeeecCCCCCCccCHHHHHHHHHHHhhCCCCCCcEEEEecCC
Q 021928 216 DESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVVNGE 286 (305)
Q Consensus 216 aE~~l~~~gi~~tilRPg~l~~~~~~~~~~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~~~~~~~~v~~g~ 286 (305)
....+. .++++..|.||++................+..-+..++|||.+++.++...--.|+++.|.+|-
T Consensus 160 lA~ela-~~IrVN~I~PG~i~t~~~~~~~~~~~~~~Pl~R~g~pediA~~v~fL~s~~~iTG~~i~VDGG~ 229 (247)
T 3ged_A 160 LAMSLG-PDVLVNCIAPGWINVTEQQEFTQEDCAAIPAGKVGTPKDISNMVLFLCQQDFITGETIIVDGGM 229 (247)
T ss_dssp HHHHHT-TTSEEEEEEECSBCCCC---CCHHHHHTSTTSSCBCHHHHHHHHHHHHHCSSCCSCEEEESTTG
T ss_pred HHHHHC-CCCEEEEEecCcCCCCCcHHHHHHHHhcCCCCCCcCHHHHHHHHHHHHhCCCCCCCeEEECcCH
Confidence 223344 4899999999996432211100000011122345688999999999998655678999999874
|
| >4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.74 E-value=1.8e-17 Score=148.31 Aligned_cols=192 Identities=15% Similarity=0.093 Sum_probs=131.4
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh-------cCCCcEEeecCCCCHHHHHHHhc------
Q 021928 95 PEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------FGTYVESMAGDASNKKFLKTALR------ 161 (305)
Q Consensus 95 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~-------~~~~v~~v~~D~~d~~~~~~~~~------ 161 (305)
...+|+||||||+|+||++++++|+++|++|+++.|++++..+. .+.++.++.+|++|.++++++++
T Consensus 17 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 96 (266)
T 4egf_A 17 RLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAEAF 96 (266)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 34569999999999999999999999999999999997653221 35678999999999888776665
Q ss_pred -CccEEEECCcc----h----------------------Hhh----hhhhcC-CCEEEEEcccccccCCCCcccccchHH
Q 021928 162 -GVRSIICPSEG----F----------------------ISN----AGSLKG-VQHVILLSQLSVYRGSGGIQALMKGNA 209 (305)
Q Consensus 162 -~~d~Vi~~~~g----~----------------------~~~----~a~~~g-v~~~V~iSS~~~~~~~~~~~~~~~~~~ 209 (305)
++|++||+++. . +.. ...+.+ -.+||++||..++.+......|..++.
T Consensus 97 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~ 176 (266)
T 4egf_A 97 GGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALAPLPDHYAYCTSKA 176 (266)
T ss_dssp TSCSEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhccCCCCChHHHHHHH
Confidence 78999987431 0 011 122233 469999999988877666556654432
Q ss_pred --HHHHHHHHHHHHhCCCCEEEEecCCcccCCC----CCcc--eeeecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcE
Q 021928 210 --RKLAEQDESMLMASGIPYTIIRTGVLQNTPG----GKQG--FQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLI 279 (305)
Q Consensus 210 --~~~~~~aE~~l~~~gi~~tilRPg~l~~~~~----~~~~--~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~ 279 (305)
..+.+.....+...+++++.|+||++..... .... ..+........+.+++|+|++++.++.+.. ..|++
T Consensus 177 a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v~~L~s~~~~~itG~~ 256 (266)
T 4egf_A 177 GLVMATKVLARELGPHGIRANSVCPTVVLTEMGQRVWGDEAKSAPMIARIPLGRFAVPHEVSDAVVWLASDAASMINGVD 256 (266)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEESCBCSHHHHHHTCSHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred HHHHHHHHHHHHHhhhCeEEEEEEeCCCcCchhhhhccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCccCcE
Confidence 1122222233456799999999999643210 0000 001111223456789999999999997543 46899
Q ss_pred EEEecCC
Q 021928 280 FEVVNGE 286 (305)
Q Consensus 280 ~~v~~g~ 286 (305)
+++.+|.
T Consensus 257 i~vdGG~ 263 (266)
T 4egf_A 257 IPVDGGY 263 (266)
T ss_dssp EEESTTG
T ss_pred EEECCCc
Confidence 9999874
|
| >3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=1.9e-17 Score=147.56 Aligned_cols=190 Identities=15% Similarity=0.154 Sum_probs=130.1
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEE-EcCcchhhh------hcCCCcEEeecCCCCHHHHHHHhc-------Cc
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKAL-VKDKRNAME------SFGTYVESMAGDASNKKFLKTALR-------GV 163 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~-~R~~~~~~~------~~~~~v~~v~~D~~d~~~~~~~~~-------~~ 163 (305)
+|++|||||+|+||++++++|+++|++|+++ .|+.+...+ ..+.++.++.+|++|.++++++++ .+
T Consensus 4 ~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 83 (258)
T 3oid_A 4 NKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETFGRL 83 (258)
T ss_dssp CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 5899999999999999999999999999987 777654322 124578999999999988887765 56
Q ss_pred cEEEECCcc-----h---------------------H----hhhhhhcCCCEEEEEcccccccCCCCcccccchHHH--H
Q 021928 164 RSIICPSEG-----F---------------------I----SNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--K 211 (305)
Q Consensus 164 d~Vi~~~~g-----~---------------------~----~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~--~ 211 (305)
|++|++++. . + ....++.+..+||++||..++.+......|..++.. .
T Consensus 84 d~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~ 163 (258)
T 3oid_A 84 DVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIVSISSLGSIRYLENYTTVGVSKAALEA 163 (258)
T ss_dssp CEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEEEEGGGTSBCTTCHHHHHHHHHHHH
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhCCCCCCcHHHHHHHHHHHH
Confidence 999988431 0 1 111244566799999999888766665556543321 1
Q ss_pred HHHHHHHHHHhCCCCEEEEecCCcccCCCCC---c-ce--eeecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEEEEe
Q 021928 212 LAEQDESMLMASGIPYTIIRTGVLQNTPGGK---Q-GF--QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVV 283 (305)
Q Consensus 212 ~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~---~-~~--~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~v~ 283 (305)
+.+.....+...+++++.|+||++....... . .. .+........+.+++|+|++++.++.+.. ..|+++++.
T Consensus 164 l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v~~L~s~~~~~itG~~i~vd 243 (258)
T 3oid_A 164 LTRYLAVELSPKQIIVNAVSGGAIDTDALKHFPNREDLLEDARQNTPAGRMVEIKDMVDTVEFLVSSKADMIRGQTIIVD 243 (258)
T ss_dssp HHHHHHHHTGGGTEEEEEEEECCBCSGGGGGCTTHHHHHHHHHHHCTTSSCBCHHHHHHHHHHHTSSTTTTCCSCEEEES
T ss_pred HHHHHHHHHhhcCcEEEEEeeCCCcChhhhhcccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcccCCccCCEEEEC
Confidence 1122222234568999999999964321100 0 00 00111223457899999999999997654 468999999
Q ss_pred cCCc
Q 021928 284 NGEE 287 (305)
Q Consensus 284 ~g~~ 287 (305)
+|..
T Consensus 244 GG~~ 247 (258)
T 3oid_A 244 GGRS 247 (258)
T ss_dssp TTGG
T ss_pred CCcc
Confidence 8863
|
| >3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} | Back alignment and structure |
|---|
Probab=99.74 E-value=8.1e-17 Score=143.60 Aligned_cols=176 Identities=16% Similarity=0.097 Sum_probs=120.0
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh------cCCCcEEeecCCCCHHHHHHHhc-------C
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------G 162 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~~~v~~v~~D~~d~~~~~~~~~-------~ 162 (305)
..+++||||||+|+||++++++|+++|++|++++|++++..+. .+..+.++.+|++|.+++.++++ .
T Consensus 27 l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 106 (262)
T 3rkr_A 27 LSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAAHGR 106 (262)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHhcCC
Confidence 3468999999999999999999999999999999998663321 24578999999999988877765 4
Q ss_pred ccEEEECCcc-----h--------------------------HhhhhhhcCCCEEEEEcccccccCCCCcccccchHH--
Q 021928 163 VRSIICPSEG-----F--------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA-- 209 (305)
Q Consensus 163 ~d~Vi~~~~g-----~--------------------------~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~-- 209 (305)
+|+||++++. . +...+++.+..+||++||..++.+......|..++.
T Consensus 107 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~ 186 (262)
T 3rkr_A 107 CDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRGHIINISSLAGKNPVADGAAYTASKWGL 186 (262)
T ss_dssp CSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCEEEEECSSCSSCCCTTCHHHHHHHHHH
T ss_pred CCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCceEEEEechhhcCCCCCCchHHHHHHHH
Confidence 7999988431 0 011133456789999999988877666555654432
Q ss_pred HHHHHHHHHHHHhCCCCEEEEecCCcccCCCCCcceeeecCCCCCCccCHHHHHHHHHHHhhCCCC
Q 021928 210 RKLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQ 275 (305)
Q Consensus 210 ~~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~~~~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~~ 275 (305)
..+.+.....+...+++++.|+||++........ .........++++|+|++++.++..+..
T Consensus 187 ~~l~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~----~~~~~~~~~~~p~dvA~~v~~l~s~~~~ 248 (262)
T 3rkr_A 187 NGLMTSAAEELRQHQVRVSLVAPGSVRTEFGVGL----SAKKSALGAIEPDDIADVVALLATQADQ 248 (262)
T ss_dssp HHHHHHHHHHHGGGTCEEEEEEECCC--------------------CCCHHHHHHHHHHHHTCCTT
T ss_pred HHHHHHHHHHhhhcCcEEEEEecCCCcCCccccc----ccccccccCCCHHHHHHHHHHHhcCccc
Confidence 1122222233456799999999999754332111 0112234578999999999999986553
|
| >3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.74 E-value=3e-17 Score=147.70 Aligned_cols=191 Identities=14% Similarity=0.159 Sum_probs=133.3
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh---hcCCCcEEeecCCCCHHHHHHHhc------CccEE
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALR------GVRSI 166 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~---~~~~~v~~v~~D~~d~~~~~~~~~------~~d~V 166 (305)
..++++|||||+|+||++++++|+++|++|++++|+.++..+ .++.++.++.+|++|.+++.++++ ++|++
T Consensus 28 l~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~id~l 107 (281)
T 3ppi_A 28 FEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADELGNRAEFVSTNVTSEDSVLAAIEAANQLGRLRYA 107 (281)
T ss_dssp GTTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHTTSSEEEEE
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhCCCCeE
Confidence 356899999999999999999999999999999999866432 345679999999999999888775 56999
Q ss_pred EECCcch--------------------------------Hhhh----hhh------cCCCEEEEEcccccccCCCCcccc
Q 021928 167 ICPSEGF--------------------------------ISNA----GSL------KGVQHVILLSQLSVYRGSGGIQAL 204 (305)
Q Consensus 167 i~~~~g~--------------------------------~~~~----a~~------~gv~~~V~iSS~~~~~~~~~~~~~ 204 (305)
|+++++. +..+ ..+ .+-.+||++||..++.+......|
T Consensus 108 v~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y 187 (281)
T 3ppi_A 108 VVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYEGQIGQTAY 187 (281)
T ss_dssp EECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCGGGTSCCTTCHHH
T ss_pred EEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEecccccCCCCCCccc
Confidence 9772210 0011 111 345699999999888776666666
Q ss_pred cchHHH--HHHHHHHHHHHhCCCCEEEEecCCcccCCC--CCcc--eeeecCCCC-CCccCHHHHHHHHHHHhhCCCCCC
Q 021928 205 MKGNAR--KLAEQDESMLMASGIPYTIIRTGVLQNTPG--GKQG--FQFEEGCAA-NGSLSKEDAAFICVEALESIPQTG 277 (305)
Q Consensus 205 ~~~~~~--~~~~~aE~~l~~~gi~~tilRPg~l~~~~~--~~~~--~~~~~~~~~-~~~Is~~DvA~~iv~~l~~~~~~~ 277 (305)
..++.. .+.+.....+...++.++.|+||++..... .... ..+...... ..+.+++|+|++++.++.++...|
T Consensus 188 ~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~~l~s~~~~tG 267 (281)
T 3ppi_A 188 AAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTPIMESVGEEALAKFAANIPFPKRLGTPDEFADAAAFLLTNGYING 267 (281)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTTCHHHHHHHHHTCCSSSSCBCHHHHHHHHHHHHHCSSCCS
T ss_pred HHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCCchhhhcccHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHcCCCcCC
Confidence 554321 122222333456799999999999643211 0000 001111122 457899999999999998776789
Q ss_pred cEEEEecCC
Q 021928 278 LIFEVVNGE 286 (305)
Q Consensus 278 ~~~~v~~g~ 286 (305)
+++++.+|.
T Consensus 268 ~~i~vdGG~ 276 (281)
T 3ppi_A 268 EVMRLDGAQ 276 (281)
T ss_dssp CEEEESTTC
T ss_pred cEEEECCCc
Confidence 999999875
|
| >3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.74 E-value=3.8e-17 Score=147.53 Aligned_cols=190 Identities=16% Similarity=0.114 Sum_probs=130.6
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh------cCCCcEEeecCCCCHHHHHHHhc-------Cc
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GV 163 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~~~v~~v~~D~~d~~~~~~~~~-------~~ 163 (305)
.+|++|||||+|+||++++++|+++|++|++++|+.++..+. .+.++.++.+|++|.+++.++++ ++
T Consensus 7 ~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 86 (280)
T 3tox_A 7 EGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRRFGGL 86 (280)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 458999999999999999999999999999999997653321 23578899999999988887765 78
Q ss_pred cEEEECCcc-----h----------------------H----hhhhhhcCCCEEEEEcccccc-cCCCCcccccchHH--
Q 021928 164 RSIICPSEG-----F----------------------I----SNAGSLKGVQHVILLSQLSVY-RGSGGIQALMKGNA-- 209 (305)
Q Consensus 164 d~Vi~~~~g-----~----------------------~----~~~a~~~gv~~~V~iSS~~~~-~~~~~~~~~~~~~~-- 209 (305)
|++|++++. . + ....++.+..+||++||..++ .+......|..++.
T Consensus 87 D~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~asKaa~ 166 (280)
T 3tox_A 87 DTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGHTAGFAGVAPYAASKAGL 166 (280)
T ss_dssp CEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCSBTTTBCCTTCHHHHHHHHHH
T ss_pred CEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhCcCCCCCchhHHHHHHHH
Confidence 999988431 0 0 111234556799999998877 44444445544332
Q ss_pred HHHHHHHHHHHHhCCCCEEEEecCCcccCCCCC-----cce---eeecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcE
Q 021928 210 RKLAEQDESMLMASGIPYTIIRTGVLQNTPGGK-----QGF---QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLI 279 (305)
Q Consensus 210 ~~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~-----~~~---~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~ 279 (305)
..+.+.....+...++.++.|+||++....... ... .+........+.+++|+|++++.++.+.. ..|++
T Consensus 167 ~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~a~~itG~~ 246 (280)
T 3tox_A 167 IGLVQALAVELGARGIRVNALLPGGTDTPANFANLPGAAPETRGFVEGLHALKRIARPEEIAEAALYLASDGASFVTGAA 246 (280)
T ss_dssp HHHHHHHHHHHHTTTEEEEEEEECSBSSTTSGGGSTTCCTHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred HHHHHHHHHHhhhcCeEEEEEEECCCCCchhhhhccccCHHHHHHHhccCccCCCcCHHHHHHHHHHHhCccccCCcCcE
Confidence 111222223345579999999999965332110 000 01111223456799999999999997643 46899
Q ss_pred EEEecCC
Q 021928 280 FEVVNGE 286 (305)
Q Consensus 280 ~~v~~g~ 286 (305)
+++.+|.
T Consensus 247 i~vdGG~ 253 (280)
T 3tox_A 247 LLADGGA 253 (280)
T ss_dssp EEESTTG
T ss_pred EEECCCc
Confidence 9999885
|
| >3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.74 E-value=2.8e-17 Score=145.47 Aligned_cols=189 Identities=17% Similarity=0.148 Sum_probs=110.7
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh------cCCCcEEeecCCCCHHHHHHHhc-------
Q 021928 95 PEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR------- 161 (305)
Q Consensus 95 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~~~v~~v~~D~~d~~~~~~~~~------- 161 (305)
...+++||||||+|+||++++++|+++|++|+++.|+.++..+. .+..+.++.+|++|.++++++++
T Consensus 6 ~~~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 85 (253)
T 3qiv_A 6 RFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAEFG 85 (253)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 34569999999999999999999999999999999997663321 24568899999999988887776
Q ss_pred CccEEEECCcc---h------------------------------HhhhhhhcCCCEEEEEcccccccCCCCcccccchH
Q 021928 162 GVRSIICPSEG---F------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGN 208 (305)
Q Consensus 162 ~~d~Vi~~~~g---~------------------------------~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~ 208 (305)
++|++||+++- . +...+++.+..+||++||..++.. ...|..++
T Consensus 86 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~---~~~Y~asK 162 (253)
T 3qiv_A 86 GIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRGGGAIVNQSSTAAWLY---SNYYGLAK 162 (253)
T ss_dssp CCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECC--------------CCH
T ss_pred CCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEECCccccCC---CchhHHHH
Confidence 78999988431 0 111234456789999999987732 22344433
Q ss_pred H--HHHHHHHHHHHHhCCCCEEEEecCCcccCCCCC---cce--eeecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcE
Q 021928 209 A--RKLAEQDESMLMASGIPYTIIRTGVLQNTPGGK---QGF--QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLI 279 (305)
Q Consensus 209 ~--~~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~---~~~--~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~ 279 (305)
. ..+.+.....+...++.++.++||++....... ... .+........+.+++|+|++++.++.+.. ..|++
T Consensus 163 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~tG~~ 242 (253)
T 3qiv_A 163 VGINGLTQQLSRELGGRNIRINAIAPGPIDTEANRTTTPKEMVDDIVKGLPLSRMGTPDDLVGMCLFLLSDEASWITGQI 242 (253)
T ss_dssp HHHHHHHHHHHHHTTTTTEEEEEEEC-------------------------------CCHHHHHHHHHHSGGGTTCCSCE
T ss_pred HHHHHHHHHHHHHHhhcCeEEEEEEecCCcccchhhcCcHHHHHHHhccCCCCCCCCHHHHHHHHHHHcCccccCCCCCE
Confidence 2 112222222234568999999999965332111 000 01111122345678999999999996543 36899
Q ss_pred EEEecCC
Q 021928 280 FEVVNGE 286 (305)
Q Consensus 280 ~~v~~g~ 286 (305)
|++.+|.
T Consensus 243 ~~vdgG~ 249 (253)
T 3qiv_A 243 FNVDGGQ 249 (253)
T ss_dssp EEC----
T ss_pred EEECCCe
Confidence 9999875
|
| >3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.74 E-value=2.3e-17 Score=148.77 Aligned_cols=191 Identities=18% Similarity=0.120 Sum_probs=131.7
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh---hcCCCcEEeecCCCCHHHHHHHhc-------CccE
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALR-------GVRS 165 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~---~~~~~v~~v~~D~~d~~~~~~~~~-------~~d~ 165 (305)
..+|++|||||+|+||++++++|+++|++|+++.|+++...+ ..+.++.++.+|++|.+++.++++ ++|+
T Consensus 27 l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~ 106 (277)
T 3gvc_A 27 LAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIGCGAAACRVDVSDEQQIIAMVDACVAAFGGVDK 106 (277)
T ss_dssp CTTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCSSCEEEECCTTCHHHHHHHHHHHHHHHSSCCE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCcceEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 346899999999999999999999999999999999766432 345678999999999988877665 6899
Q ss_pred EEECCcch--------------------------H----hhhhhhcCCCEEEEEcccccccCCCCcccccchHHH--HHH
Q 021928 166 IICPSEGF--------------------------I----SNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--KLA 213 (305)
Q Consensus 166 Vi~~~~g~--------------------------~----~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~--~~~ 213 (305)
+|++++.. + ....++.+..+||++||..++.+..+...|..++.. .+.
T Consensus 107 lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~l~ 186 (277)
T 3gvc_A 107 LVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQVAVGGTGAYGMSKAGIIQLS 186 (277)
T ss_dssp EEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHH
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCCchhHHHHHHHHHHHH
Confidence 99884310 0 111234566799999999888766665566544321 112
Q ss_pred HHHHHHHHhCCCCEEEEecCCcccCCC-----CCc-cee--eec---CCCCCCccCHHHHHHHHHHHhhCCC--CCCcEE
Q 021928 214 EQDESMLMASGIPYTIIRTGVLQNTPG-----GKQ-GFQ--FEE---GCAANGSLSKEDAAFICVEALESIP--QTGLIF 280 (305)
Q Consensus 214 ~~aE~~l~~~gi~~tilRPg~l~~~~~-----~~~-~~~--~~~---~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~ 280 (305)
+.....+...+++++.|+||++..... ... ... ... ......+.+++|+|++++.++.+.. ..|+++
T Consensus 187 ~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~~L~s~~a~~itG~~i 266 (277)
T 3gvc_A 187 RITAAELRSSGIRSNTLLPAFVDTPMQQTAMAMFDGALGAGGARSMIARLQGRMAAPEEMAGIVVFLLSDDASMITGTTQ 266 (277)
T ss_dssp HHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTCC------CCHHHHHHHHHSSCBCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred HHHHHHhcccCeEEEEEeeCCccCchHHHhhhcchhhHHHHhhhhhhhccccCCCCHHHHHHHHHHHcCCccCCccCcEE
Confidence 222233456899999999999643210 000 000 000 1112346789999999999996543 468999
Q ss_pred EEecCC
Q 021928 281 EVVNGE 286 (305)
Q Consensus 281 ~v~~g~ 286 (305)
++.+|.
T Consensus 267 ~vdGG~ 272 (277)
T 3gvc_A 267 IADGGT 272 (277)
T ss_dssp EESTTG
T ss_pred EECCcc
Confidence 999875
|
| >3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.74 E-value=1.4e-16 Score=142.05 Aligned_cols=191 Identities=12% Similarity=0.026 Sum_probs=129.0
Q ss_pred CCCCEEEEEcCCC-hHHHHHHHHHHhCCCeEEEEEcCcchhhhh-------cCCCcEEeecCCCCHHHHHHHhc------
Q 021928 96 EARDAVLVTDGDS-DIGQMVILSLIVKRTRIKALVKDKRNAMES-------FGTYVESMAGDASNKKFLKTALR------ 161 (305)
Q Consensus 96 ~~~~~vlVtGatG-~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~-------~~~~v~~v~~D~~d~~~~~~~~~------ 161 (305)
..+++|+||||+| +||++++++|+++|++|++++|+.++..+. .+.++.++.+|++|.++++++++
T Consensus 20 l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 99 (266)
T 3o38_A 20 LKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVEKA 99 (266)
T ss_dssp TTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHHHh
Confidence 4569999999997 799999999999999999999997653221 13478999999999988887765
Q ss_pred -CccEEEECCcc----h----------------------Hhhh----hhhc-CCCEEEEEcccccccCCCCcccccchHH
Q 021928 162 -GVRSIICPSEG----F----------------------ISNA----GSLK-GVQHVILLSQLSVYRGSGGIQALMKGNA 209 (305)
Q Consensus 162 -~~d~Vi~~~~g----~----------------------~~~~----a~~~-gv~~~V~iSS~~~~~~~~~~~~~~~~~~ 209 (305)
.+|++||+++- . +..+ .++. +..+||++||..++.+..+...|...++
T Consensus 100 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sKa 179 (266)
T 3o38_A 100 GRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWRAQHSQSHYAAAKA 179 (266)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGTCCCTTCHHHHHHHH
T ss_pred CCCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHcCCCCCCchHHHHHH
Confidence 67999988431 0 1111 1222 5678999999988876666655654432
Q ss_pred H--HHHHHHHHHHHhCCCCEEEEecCCcccCCCCC----c-ceeeecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEE
Q 021928 210 R--KLAEQDESMLMASGIPYTIIRTGVLQNTPGGK----Q-GFQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIF 280 (305)
Q Consensus 210 ~--~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~----~-~~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~ 280 (305)
. .+.+.....+...++.++.|+||++....... . ...+........+.+++|+|++++.++.+.. ..|+++
T Consensus 180 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~r~~~~~dva~~i~~l~s~~~~~~tG~~i 259 (266)
T 3o38_A 180 GVMALTRCSAIEAVEFGVRINAVSPSIARHKFLEKTSSSELLDRLASDEAFGRAAEPWEVAATIAFLASDYSSYMTGEVV 259 (266)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECCCCC-----------------CCTTSSCCCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred HHHHHHHHHHHHHHHcCcEEEEEeCCcccchhhhccCcHHHHHHHHhcCCcCCCCCHHHHHHHHHHHcCccccCccCCEE
Confidence 1 11122223344579999999999865332110 0 0011122233457799999999999997543 468999
Q ss_pred EEecCC
Q 021928 281 EVVNGE 286 (305)
Q Consensus 281 ~v~~g~ 286 (305)
++.+|.
T Consensus 260 ~vdgG~ 265 (266)
T 3o38_A 260 SVSSQR 265 (266)
T ss_dssp EESSCC
T ss_pred EEcCCc
Confidence 998773
|
| >3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=99.74 E-value=4.1e-17 Score=148.32 Aligned_cols=192 Identities=18% Similarity=0.142 Sum_probs=129.7
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh---c---C-CCcEEeecCCCCHHHHHHHhc------
Q 021928 95 PEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---F---G-TYVESMAGDASNKKFLKTALR------ 161 (305)
Q Consensus 95 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~---~-~~v~~v~~D~~d~~~~~~~~~------ 161 (305)
+..+|+||||||+|+||++++++|+++|++|++++|+.++..+. + + .++.++.+|++|.++++++++
T Consensus 38 ~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 117 (293)
T 3rih_A 38 DLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDAF 117 (293)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHHHc
Confidence 34568999999999999999999999999999999998663321 1 2 468899999999988776654
Q ss_pred -CccEEEECCcch--------------------------Hhhh----hhhcCCCEEEEEcccccc-cCCCCcccccchHH
Q 021928 162 -GVRSIICPSEGF--------------------------ISNA----GSLKGVQHVILLSQLSVY-RGSGGIQALMKGNA 209 (305)
Q Consensus 162 -~~d~Vi~~~~g~--------------------------~~~~----a~~~gv~~~V~iSS~~~~-~~~~~~~~~~~~~~ 209 (305)
.+|++|++++.. +..+ .++.+..+||++||..+. .+..+...|..++.
T Consensus 118 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iV~isS~~~~~~~~~~~~~Y~asKa 197 (293)
T 3rih_A 118 GALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGPVTGYPGWSHYGASKA 197 (293)
T ss_dssp SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHSSCEEEEECCSBTTTBBCTTCHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEeChhhccCCCCCCHHHHHHHH
Confidence 679999884310 1111 245677899999998764 44444445544332
Q ss_pred --HHHHHHHHHHHHhCCCCEEEEecCCcccCCC--CCcce--eeecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEEE
Q 021928 210 --RKLAEQDESMLMASGIPYTIIRTGVLQNTPG--GKQGF--QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFE 281 (305)
Q Consensus 210 --~~~~~~aE~~l~~~gi~~tilRPg~l~~~~~--~~~~~--~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~ 281 (305)
..+.+.....+...+++++.|+||++..... ..... .+........+.+++|+|++++.++.... ..|++++
T Consensus 198 a~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~fL~s~~a~~itG~~i~ 277 (293)
T 3rih_A 198 AQLGFMRTAAIELAPRGVTVNAILPGNILTEGLVDMGEEYISGMARSIPMGMLGSPVDIGHLAAFLATDEAGYITGQAIV 277 (293)
T ss_dssp HHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHTCHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred HHHHHHHHHHHHHhhhCeEEEEEecCCCcCcchhhccHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCccccCCCCCEEE
Confidence 1112222233455799999999999643211 00000 00111222345689999999999996543 4689999
Q ss_pred EecCC
Q 021928 282 VVNGE 286 (305)
Q Consensus 282 v~~g~ 286 (305)
+.+|.
T Consensus 278 vdGG~ 282 (293)
T 3rih_A 278 VDGGQ 282 (293)
T ss_dssp ESTTT
T ss_pred ECCCc
Confidence 99875
|
| >3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} | Back alignment and structure |
|---|
Probab=99.74 E-value=1.5e-16 Score=146.24 Aligned_cols=199 Identities=12% Similarity=0.122 Sum_probs=127.6
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh------cCC--CcEEeecCCCCHHHHHHHhc-------
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGT--YVESMAGDASNKKFLKTALR------- 161 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~~--~v~~v~~D~~d~~~~~~~~~------- 161 (305)
.+++||||||+|+||++++++|+++|++|++++|+.++..+. .+. .+.++.+|++|.+++.++++
T Consensus 7 ~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 86 (319)
T 3ioy_A 7 AGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEARFG 86 (319)
T ss_dssp TTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred CCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHhCC
Confidence 458999999999999999999999999999999998763321 122 68999999999988887775
Q ss_pred CccEEEECCcc----h----------------------Hhh----hhhhc------CCCEEEEEcccccccCCCCccccc
Q 021928 162 GVRSIICPSEG----F----------------------ISN----AGSLK------GVQHVILLSQLSVYRGSGGIQALM 205 (305)
Q Consensus 162 ~~d~Vi~~~~g----~----------------------~~~----~a~~~------gv~~~V~iSS~~~~~~~~~~~~~~ 205 (305)
++|+||++++- . +.. ...+. +..+||++||..++.+......|.
T Consensus 87 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~~~~~~~~Y~ 166 (319)
T 3ioy_A 87 PVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAAGSPGIYN 166 (319)
T ss_dssp CEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTCCCSSSHHHH
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEecccccccCCCCCHHHH
Confidence 56999988441 0 011 11121 456899999998887766666665
Q ss_pred chHHH--HHHHHHHHHHHhCCCCEEEEecCCcccCCCCCc----ce----e-------ee-cCCCCCCccCHHHHHHHHH
Q 021928 206 KGNAR--KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQ----GF----Q-------FE-EGCAANGSLSKEDAAFICV 267 (305)
Q Consensus 206 ~~~~~--~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~~----~~----~-------~~-~~~~~~~~Is~~DvA~~iv 267 (305)
.++.. .+.+.....+...++.++.|+||++........ .. . .. ........++++|+|+.++
T Consensus 167 aSKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~vA~~~~ 246 (319)
T 3ioy_A 167 TTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYIYASDDIRPDALKGEVKPVDKTAVERLAGVHEFGMEPDVIGARVI 246 (319)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTCEEEEECCCCBC-----------------------------CCGGGSSBCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhhcCCEEEEEEcCeEccCcccccccCchhhcccccchhHHHHHHHHHhhhcCCCHHHHHHHHH
Confidence 54321 122222233556799999999999643221100 00 0 00 0000112279999999999
Q ss_pred HHhhCCCCCCcEEEEecCCcCHHHHHHHHHHhh
Q 021928 268 EALESIPQTGLIFEVVNGEEKVSDWKKCFSRLM 300 (305)
Q Consensus 268 ~~l~~~~~~~~~~~v~~g~~s~~d~~~~~~~l~ 300 (305)
.+++.+. +.+..++.-...+.+.+.++.
T Consensus 247 ~al~~~~-----~~i~~~~~~~~~~~~~~~~~~ 274 (319)
T 3ioy_A 247 EAMKANR-----LHIFSHPDHKEELREVFDEII 274 (319)
T ss_dssp HHHHTTC-----SEECCCSTTHHHHHHHHHHHH
T ss_pred HHHHcCC-----CEEEcCHHHHHHHHHHHHHHH
Confidence 9998753 233334433444555555543
|
| >1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=4.7e-17 Score=146.78 Aligned_cols=191 Identities=9% Similarity=0.051 Sum_probs=126.4
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhh-------hhcCCCcEEeecCCCCHHHHHHHhc-------
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM-------ESFGTYVESMAGDASNKKFLKTALR------- 161 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~-------~~~~~~v~~v~~D~~d~~~~~~~~~------- 161 (305)
..+|+++||||+|+||++++++|+++|++|+++.|+.+... ...+.++.++.+|++|.+++.++++
T Consensus 27 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 106 (283)
T 1g0o_A 27 LEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFG 106 (283)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 45689999999999999999999999999999999865421 1124568899999999888776654
Q ss_pred CccEEEECCcch--------------------------Hhhhhhhc--CCCEEEEEcccccccCCCC-cccccchHH--H
Q 021928 162 GVRSIICPSEGF--------------------------ISNAGSLK--GVQHVILLSQLSVYRGSGG-IQALMKGNA--R 210 (305)
Q Consensus 162 ~~d~Vi~~~~g~--------------------------~~~~a~~~--gv~~~V~iSS~~~~~~~~~-~~~~~~~~~--~ 210 (305)
++|++||+++.. +..++... +..+||++||..++.+... ...|..++. .
T Consensus 107 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~asK~a~~ 186 (283)
T 1g0o_A 107 KLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAKAVPKHAVYSGSKGAIE 186 (283)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCSSCSSCHHHHHHHHHHH
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEechhhccCCCCCCcchHHHHHHHH
Confidence 689999884310 11222222 5679999999887654432 444544332 1
Q ss_pred HHHHHHHHHHHhCCCCEEEEecCCcccCC---------CCC----cce--eeec--CCCCCCccCHHHHHHHHHHHhhCC
Q 021928 211 KLAEQDESMLMASGIPYTIIRTGVLQNTP---------GGK----QGF--QFEE--GCAANGSLSKEDAAFICVEALESI 273 (305)
Q Consensus 211 ~~~~~aE~~l~~~gi~~tilRPg~l~~~~---------~~~----~~~--~~~~--~~~~~~~Is~~DvA~~iv~~l~~~ 273 (305)
.+.+.....+...++++++|+||++.... ... ... .+.. ......+.+++|+|++++.++...
T Consensus 187 ~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~~ 266 (283)
T 1g0o_A 187 TFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPIDIARVVCFLASND 266 (283)
T ss_dssp HHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCTTCSCBCHHHHHHHHHHHHSGG
T ss_pred HHHHHHHHHhcccCeEEEEEecCcccchhhhhhhhhccccccccCHHHHHHHHhhcCCCCCCCcCHHHHHHHHHHHhCcc
Confidence 11222223344579999999999964321 000 000 0001 122234678999999999999754
Q ss_pred C--CCCcEEEEecCC
Q 021928 274 P--QTGLIFEVVNGE 286 (305)
Q Consensus 274 ~--~~~~~~~v~~g~ 286 (305)
. ..|+++.+.+|.
T Consensus 267 ~~~itG~~i~vdgG~ 281 (283)
T 1g0o_A 267 GGWVTGKVIGIDGGA 281 (283)
T ss_dssp GTTCCSCEEEESTTC
T ss_pred ccCcCCCEEEeCCCc
Confidence 3 468899998763
|
| >1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A | Back alignment and structure |
|---|
Probab=99.74 E-value=2.5e-17 Score=145.75 Aligned_cols=186 Identities=13% Similarity=0.131 Sum_probs=123.0
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhc-------CccEEEE
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR-------GVRSIIC 168 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~-------~~d~Vi~ 168 (305)
..+|+|+||||+|+||++++++|+++|++|+++.|++++..+ +..+.+|++|.++++++++ ++|++|+
T Consensus 13 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~-----~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~ 87 (247)
T 1uzm_A 13 FVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKG-----LFGVEVDVTDSDAVDRAFTAVEEHQGPVEVLVS 87 (247)
T ss_dssp CCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTT-----SEEEECCTTCHHHHHHHHHHHHHHHSSCSEEEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHH-----hcCeeccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 346899999999999999999999999999999998765432 2248899999988877765 5799998
Q ss_pred CCcch--------------------------Hhh----hhhhcCCCEEEEEcccccccCCCCcccccchHH--HHHHHHH
Q 021928 169 PSEGF--------------------------ISN----AGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA--RKLAEQD 216 (305)
Q Consensus 169 ~~~g~--------------------------~~~----~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~--~~~~~~a 216 (305)
+++.. +.. .+++.+.++||++||..++.+......|..++. ..+.+..
T Consensus 88 ~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~l 167 (247)
T 1uzm_A 88 NAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGNQANYAASKAGVIGMARSI 167 (247)
T ss_dssp ECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-----CCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEECCHhhccCCCCChhHHHHHHHHHHHHHHH
Confidence 74310 111 123456789999999987665544445544332 1122222
Q ss_pred HHHHHhCCCCEEEEecCCcccCCCC--Ccce--eeecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEEEEecCC
Q 021928 217 ESMLMASGIPYTIIRTGVLQNTPGG--KQGF--QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVNGE 286 (305)
Q Consensus 217 E~~l~~~gi~~tilRPg~l~~~~~~--~~~~--~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~v~~g~ 286 (305)
...+...++++++|+||++...... .... .+........+++++|+|++++.++..+. ..|+.+++.+|.
T Consensus 168 a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~~~~~G~~i~vdgG~ 243 (247)
T 1uzm_A 168 ARELSKANVTANVVAPGYIDTDMTRALDERIQQGALQFIPAKRVGTPAEVAGVVSFLASEDASYISGAVIPVDGGM 243 (247)
T ss_dssp HHHHGGGTEEEEEEEECSBCCHHHHHSCHHHHHHHGGGCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred HHHhhhcCcEEEEEEeCCCcccchhhcCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCCcCCEEEECCCc
Confidence 2334557999999999996432110 0000 00011122357899999999999997533 468999998774
|
| >3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=99.74 E-value=2.5e-17 Score=147.91 Aligned_cols=190 Identities=13% Similarity=0.122 Sum_probs=131.5
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh------hcCCCcEEeecCCCCHHHHHHHhc-------Cc
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTALR-------GV 163 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~------~~~~~v~~v~~D~~d~~~~~~~~~-------~~ 163 (305)
.+|++|||||+|+||++++++|+++|++|+++.|+++...+ ..+.++.++.+|++|.++++++++ .+
T Consensus 27 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 106 (270)
T 3ftp_A 27 DKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKEFGAL 106 (270)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHHHcCCC
Confidence 45899999999999999999999999999999998765322 124568899999999988887775 78
Q ss_pred cEEEECCcc----h----------------------Hhh----hhhhcCCCEEEEEcccccccCCCCcccccchHHH--H
Q 021928 164 RSIICPSEG----F----------------------ISN----AGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--K 211 (305)
Q Consensus 164 d~Vi~~~~g----~----------------------~~~----~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~--~ 211 (305)
|++|++++. . +.. ...+.+-.+||++||..++.+..+...|..++.. .
T Consensus 107 D~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~ 186 (270)
T 3ftp_A 107 NVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSAGNPGQVNYAAAKAGVAG 186 (270)
T ss_dssp CEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTBHHHHHHHHHHHH
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCCCCchhHHHHHHHHHH
Confidence 999988431 0 111 1233456799999999887766666566554321 1
Q ss_pred HHHHHHHHHHhCCCCEEEEecCCcccCCC----CCcceeeecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEEEEecC
Q 021928 212 LAEQDESMLMASGIPYTIIRTGVLQNTPG----GKQGFQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVNG 285 (305)
Q Consensus 212 ~~~~aE~~l~~~gi~~tilRPg~l~~~~~----~~~~~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~v~~g 285 (305)
+.+.....+...+++++.|+||++..... ......+........+.+++|+|++++.++.... ..|+++++.+|
T Consensus 187 l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG 266 (270)
T 3ftp_A 187 MTRALAREIGSRGITVNCVAPGFIDTDMTKGLPQEQQTALKTQIPLGRLGSPEDIAHAVAFLASPQAGYITGTTLHVNGG 266 (270)
T ss_dssp HHHHHHHHHGGGTEEEEEEEECSBCSHHHHHSCHHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred HHHHHHHHHhhhCeEEEEEEeCCCcCcchhhcCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCCCcCCccCcEEEECCC
Confidence 22222233455799999999999643211 0000001112233456799999999999996433 46899999987
Q ss_pred C
Q 021928 286 E 286 (305)
Q Consensus 286 ~ 286 (305)
.
T Consensus 267 ~ 267 (270)
T 3ftp_A 267 M 267 (270)
T ss_dssp S
T ss_pred c
Confidence 5
|
| >3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.74 E-value=5.4e-17 Score=145.00 Aligned_cols=189 Identities=12% Similarity=0.106 Sum_probs=131.1
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh------hcCCCcEEeecCCCCHHHHHHHhc-------Cc
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTALR-------GV 163 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~------~~~~~v~~v~~D~~d~~~~~~~~~-------~~ 163 (305)
.+|++|||||+|+||++++++|+++|++|++++|+.++..+ ..+.++.++.+|++|.+++.++++ .+
T Consensus 10 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 89 (264)
T 3ucx_A 10 TDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKAYGRV 89 (264)
T ss_dssp TTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTSCC
T ss_pred CCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 45899999999999999999999999999999999765332 124578999999999988887765 67
Q ss_pred cEEEECCcch---------------------------Hhh----hhhhcCCCEEEEEcccccccCCCCcccccchHHH--
Q 021928 164 RSIICPSEGF---------------------------ISN----AGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR-- 210 (305)
Q Consensus 164 d~Vi~~~~g~---------------------------~~~----~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~-- 210 (305)
|++||+++.. +.. ..++.+ .+||++||..++.+......|..++..
T Consensus 90 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~asKaa~~ 168 (264)
T 3ucx_A 90 DVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESK-GAVVNVNSMVVRHSQAKYGAYKMAKSALL 168 (264)
T ss_dssp SEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHT-CEEEEECCGGGGCCCTTCHHHHHHHHHHH
T ss_pred cEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEECcchhccCCCccHHHHHHHHHHH
Confidence 9999884310 011 122334 799999999888776666566544321
Q ss_pred HHHHHHHHHHHhCCCCEEEEecCCcccCCCC------------C-cc--eeeecCCCCCCccCHHHHHHHHHHHhhCCC-
Q 021928 211 KLAEQDESMLMASGIPYTIIRTGVLQNTPGG------------K-QG--FQFEEGCAANGSLSKEDAAFICVEALESIP- 274 (305)
Q Consensus 211 ~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~------------~-~~--~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~- 274 (305)
.+.+.....+...+++++.|+||++...... . .. ..+........+.+++|+|++++.++.+..
T Consensus 169 ~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~L~s~~~~ 248 (264)
T 3ucx_A 169 AMSQTLATELGEKGIRVNSVLPGYIWGGTLKSYFEHQAGKYGTSVEDIYNAAAAGSDLKRLPTEDEVASAILFMASDLAS 248 (264)
T ss_dssp HHHHHHHHHHHTTTCEEEEEEESSCBSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSSSSSCCBHHHHHHHHHHHHSGGGT
T ss_pred HHHHHHHHHhCccCeEEEEEecCccccccHHHHHHhhhhhcCCCHHHHHHHHhccCCcccCCCHHHHHHHHHHHcCcccc
Confidence 1222222334568999999999996422100 0 00 001112233457799999999999997543
Q ss_pred -CCCcEEEEecCC
Q 021928 275 -QTGLIFEVVNGE 286 (305)
Q Consensus 275 -~~~~~~~v~~g~ 286 (305)
..|+++++.+|.
T Consensus 249 ~itG~~i~vdGG~ 261 (264)
T 3ucx_A 249 GITGQALDVNCGE 261 (264)
T ss_dssp TCCSCEEEESTTS
T ss_pred CCCCCEEEECCCc
Confidence 468999999875
|
| >3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=3.4e-17 Score=144.99 Aligned_cols=190 Identities=18% Similarity=0.212 Sum_probs=132.5
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh---hcCCCcEEeecCCCCHHHHHHHhc-------CccEE
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALR-------GVRSI 166 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~---~~~~~v~~v~~D~~d~~~~~~~~~-------~~d~V 166 (305)
.+|+++||||+|+||++++++|+++|++|+++.|++++..+ ..+.++.++.+|++|.++++++++ ++|++
T Consensus 5 ~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~l 84 (247)
T 3rwb_A 5 AGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKARAIAADISDPGSVKALFAEIQALTGGIDIL 84 (247)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEECCCCTTCHHHHHHHHHHHHHHHSCCSEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCEE
Confidence 45999999999999999999999999999999999866432 235678999999999988887775 78999
Q ss_pred EECCcch--------------------------Hhh----hhhhcC-CCEEEEEcccccccCCCCcccccchHH--HHHH
Q 021928 167 ICPSEGF--------------------------ISN----AGSLKG-VQHVILLSQLSVYRGSGGIQALMKGNA--RKLA 213 (305)
Q Consensus 167 i~~~~g~--------------------------~~~----~a~~~g-v~~~V~iSS~~~~~~~~~~~~~~~~~~--~~~~ 213 (305)
|++++.. +.. .+++.+ ..+||++||...+.+......|..++. ..+.
T Consensus 85 v~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~ 164 (247)
T 3rwb_A 85 VNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAGTPNMAAYVAAKGGVIGFT 164 (247)
T ss_dssp EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHTCTTCHHHHHHHHHHHHHH
T ss_pred EECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhccCCCCchhhHHHHHHHHHHH
Confidence 9884310 111 133444 679999999988776666666655432 1122
Q ss_pred HHHHHHHHhCCCCEEEEecCCcccCCC----CCcceeeecC-CCCCCccCHHHHHHHHHHHhhCCC--CCCcEEEEecCC
Q 021928 214 EQDESMLMASGIPYTIIRTGVLQNTPG----GKQGFQFEEG-CAANGSLSKEDAAFICVEALESIP--QTGLIFEVVNGE 286 (305)
Q Consensus 214 ~~aE~~l~~~gi~~tilRPg~l~~~~~----~~~~~~~~~~-~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~v~~g~ 286 (305)
+.....+...+++++.|+||++..... ......+... .....+.+++|+|++++.++.+.. ..|+++++.+|.
T Consensus 165 ~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~r~~~pedva~~v~~L~s~~~~~itG~~i~vdGG~ 244 (247)
T 3rwb_A 165 RALATELGKYNITANAVTPGLIESDGVKASPHNEAFGFVEMLQAMKGKGQPEHIADVVSFLASDDARWITGQTLNVDAGM 244 (247)
T ss_dssp HHHHHHHGGGTEEEEEEEECSBCCHHHHTSGGGGGHHHHHHHSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred HHHHHHhhhcCeEEEEEeeCcCcCccccccChhHHHHHHhcccccCCCcCHHHHHHHHHHHhCccccCCCCCEEEECCCc
Confidence 222333456899999999999643210 0000000000 223456789999999999997543 468999998874
|
| >3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=99.73 E-value=1.9e-17 Score=148.60 Aligned_cols=187 Identities=14% Similarity=0.135 Sum_probs=127.8
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhc-------CccEEE
Q 021928 95 PEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR-------GVRSII 167 (305)
Q Consensus 95 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~-------~~d~Vi 167 (305)
+..+|+||||||+|+||++++++|+++|++|+++.|+.+... ..+..+.+|++|.+++.++++ .+|++|
T Consensus 11 ~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~----~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv 86 (269)
T 3vtz_A 11 EFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDV----NVSDHFKIDVTNEEEVKEAVEKTTKKYGRIDILV 86 (269)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--CT----TSSEEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhcc----CceeEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 445699999999999999999999999999999999876542 257889999999988887775 789999
Q ss_pred ECCcc----h----------------------H----hhhhhhcCCCEEEEEcccccccCCCCcccccchHHHH--HHHH
Q 021928 168 CPSEG----F----------------------I----SNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK--LAEQ 215 (305)
Q Consensus 168 ~~~~g----~----------------------~----~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~~--~~~~ 215 (305)
++++. . + ...+++.+..+||++||..++.+......|..++... +.+.
T Consensus 87 ~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~ 166 (269)
T 3vtz_A 87 NNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHGSIINIASVQSYAATKNAAAYVTSKHALLGLTRS 166 (269)
T ss_dssp ECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBCTTCHHHHHHHHHHHHHHHH
T ss_pred ECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCCCCChhHHHHHHHHHHHHHH
Confidence 88431 0 0 1113345678999999999887766665665433211 1111
Q ss_pred HHHHHHhCCCCEEEEecCCcccCCC---------C-C---cc--eeeecCCCCCCccCHHHHHHHHHHHhhCCC--CCCc
Q 021928 216 DESMLMASGIPYTIIRTGVLQNTPG---------G-K---QG--FQFEEGCAANGSLSKEDAAFICVEALESIP--QTGL 278 (305)
Q Consensus 216 aE~~l~~~gi~~tilRPg~l~~~~~---------~-~---~~--~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~ 278 (305)
....+. .++.++.|+||++..... . . .. ..+........+.+++|+|++++.++.+.. ..|+
T Consensus 167 la~e~~-~~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~itG~ 245 (269)
T 3vtz_A 167 VAIDYA-PKIRCNAVCPGTIMTPMVIKAAKMEVGEDENAVERKIEEWGRQHPMGRIGRPEEVAEVVAFLASDRSSFITGA 245 (269)
T ss_dssp HHHHHT-TTEEEEEEEECSBCCHHHHHHHHHHHCCSTTHHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGGGTTCCSC
T ss_pred HHHHhc-CCCEEEEEEECCCcCcchhhhhhccccccchhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCCccCCCcCc
Confidence 111222 389999999999643210 0 0 00 000111223456789999999999997543 4689
Q ss_pred EEEEecCC
Q 021928 279 IFEVVNGE 286 (305)
Q Consensus 279 ~~~v~~g~ 286 (305)
++++.+|.
T Consensus 246 ~i~vdGG~ 253 (269)
T 3vtz_A 246 CLTVDGGL 253 (269)
T ss_dssp EEEESTTG
T ss_pred EEEECCCc
Confidence 99999875
|
| >3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.73 E-value=2.3e-17 Score=146.25 Aligned_cols=192 Identities=14% Similarity=0.128 Sum_probs=129.7
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEE-cCcchhhh------hcCCCcEEeecCCCCHHHHHHHhc------
Q 021928 95 PEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALV-KDKRNAME------SFGTYVESMAGDASNKKFLKTALR------ 161 (305)
Q Consensus 95 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~-R~~~~~~~------~~~~~v~~v~~D~~d~~~~~~~~~------ 161 (305)
..++++||||||+|+||++++++|+++|++|++++ |+.+...+ ..+.++.++.+|++|.++++++++
T Consensus 10 ~~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 89 (256)
T 3ezl_A 10 VMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDKVKAEV 89 (256)
T ss_dssp ---CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHHHHHhc
Confidence 34569999999999999999999999999999988 44433211 234578999999999988887775
Q ss_pred -CccEEEECCcch------------------------------HhhhhhhcCCCEEEEEcccccccCCCCcccccchHHH
Q 021928 162 -GVRSIICPSEGF------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR 210 (305)
Q Consensus 162 -~~d~Vi~~~~g~------------------------------~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~ 210 (305)
++|++||+++.. +...+++.+..+||++||..++.+..+...|..++..
T Consensus 90 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a 169 (256)
T 3ezl_A 90 GEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFGQTNYSTAKAG 169 (256)
T ss_dssp CCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCGGGSCSCCHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhccCCCCCcccHHHHHH
Confidence 679999884310 1112345677899999999888776666666554321
Q ss_pred --HHHHHHHHHHHhCCCCEEEEecCCcccCCC-C-Ccce--eeecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEEEE
Q 021928 211 --KLAEQDESMLMASGIPYTIIRTGVLQNTPG-G-KQGF--QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEV 282 (305)
Q Consensus 211 --~~~~~aE~~l~~~gi~~tilRPg~l~~~~~-~-~~~~--~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~v 282 (305)
.+.+.....+...++.++.++||++..... . .... .+........+.+++|+|++++.++.... ..|+++++
T Consensus 170 ~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~tG~~i~v 249 (256)
T 3ezl_A 170 IHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIRPDVLEKIVATIPVRRLGSPDEIGSIVAWLASEESGFSTGADFSL 249 (256)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEE
T ss_pred HHHHHHHHHHHHHHhCCEEEEEEECcccCccccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCCcccCCcCcEEEE
Confidence 122222233455789999999999643211 0 0000 00111223456789999999999986433 46899999
Q ss_pred ecCC
Q 021928 283 VNGE 286 (305)
Q Consensus 283 ~~g~ 286 (305)
.+|.
T Consensus 250 dgG~ 253 (256)
T 3ezl_A 250 NGGL 253 (256)
T ss_dssp STTS
T ss_pred CCCE
Confidence 8774
|
| >1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.73 E-value=3.1e-17 Score=147.69 Aligned_cols=189 Identities=12% Similarity=0.114 Sum_probs=127.8
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh------cCC---CcEEeecCCCCHHHHHHHhc------
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGT---YVESMAGDASNKKFLKTALR------ 161 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~~---~v~~v~~D~~d~~~~~~~~~------ 161 (305)
.+|+++||||+|+||++++++|+++|++|++++|++++..+. .+. ++.++.+|++|.++++++++
T Consensus 5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 84 (280)
T 1xkq_A 5 SNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQF 84 (280)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHHhc
Confidence 458999999999999999999999999999999997653321 122 68899999999988887765
Q ss_pred -CccEEEECCc-----c----h---------------------Hhh----hhhhcCCCEEEEEcccccccCC-CCccccc
Q 021928 162 -GVRSIICPSE-----G----F---------------------ISN----AGSLKGVQHVILLSQLSVYRGS-GGIQALM 205 (305)
Q Consensus 162 -~~d~Vi~~~~-----g----~---------------------~~~----~a~~~gv~~~V~iSS~~~~~~~-~~~~~~~ 205 (305)
++|++|++++ . . +.. ..++.+ ++||++||..++.+. .....|.
T Consensus 85 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~~Y~ 163 (280)
T 1xkq_A 85 GKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK-GEIVNVSSIVAGPQAQPDFLYYA 163 (280)
T ss_dssp SCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGSSSCCCSSHHHH
T ss_pred CCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCC-CcEEEecCccccCCCCCcccHHH
Confidence 6899998843 1 1 001 112234 899999999887655 4444554
Q ss_pred chHH--HHHHHHHHHHHHhCCCCEEEEecCCcccCCCCCc-----------ce--eeecCCCCCCccCHHHHHHHHHHHh
Q 021928 206 KGNA--RKLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQ-----------GF--QFEEGCAANGSLSKEDAAFICVEAL 270 (305)
Q Consensus 206 ~~~~--~~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~~-----------~~--~~~~~~~~~~~Is~~DvA~~iv~~l 270 (305)
.++. ..+.+.....+...+++++.|+||++........ .. .+........+.+++|+|++++.++
T Consensus 164 asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pedvA~~v~~l~ 243 (280)
T 1xkq_A 164 IAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIGAAGKPEHIANIILFLA 243 (280)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhccCCeEEEEEeeCcCcCCcccccccccccccchHHHHHHHHcCCCCCCCCCHHHHHHHHHHhc
Confidence 4332 1122222233456799999999999643211000 00 0001112245689999999999998
Q ss_pred hCC---CCCCcEEEEecCC
Q 021928 271 ESI---PQTGLIFEVVNGE 286 (305)
Q Consensus 271 ~~~---~~~~~~~~v~~g~ 286 (305)
..+ ...|+.+++.+|.
T Consensus 244 s~~~~~~~tG~~i~vdgG~ 262 (280)
T 1xkq_A 244 DRNLSFYILGQSIVADGGT 262 (280)
T ss_dssp CHHHHTTCCSCEEEESTTG
T ss_pred CcccccCccCCeEEECCCc
Confidence 654 3468999998874
|
| >1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.73 E-value=1.9e-17 Score=147.02 Aligned_cols=191 Identities=15% Similarity=0.175 Sum_probs=124.3
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh-------hcCCCcEEeecCCCCHHHHHHHhc-------
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME-------SFGTYVESMAGDASNKKFLKTALR------- 161 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~-------~~~~~v~~v~~D~~d~~~~~~~~~------- 161 (305)
.++|+|+||||+|+||++++++|+++|++|++++|+.++..+ ..+.++.++.+|++|.++++++++
T Consensus 12 ~~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 91 (265)
T 1h5q_A 12 FVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLG 91 (265)
T ss_dssp CTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSC
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHHHhcC
Confidence 345899999999999999999999999999999997554221 124578999999999988877665
Q ss_pred CccEEEECCcch--------------------------Hhhh----hhhcC-CCEEEEEcccccccCCCC-------ccc
Q 021928 162 GVRSIICPSEGF--------------------------ISNA----GSLKG-VQHVILLSQLSVYRGSGG-------IQA 203 (305)
Q Consensus 162 ~~d~Vi~~~~g~--------------------------~~~~----a~~~g-v~~~V~iSS~~~~~~~~~-------~~~ 203 (305)
.+|+|||+++.. +..+ ..+.+ .++||++||..++.+... ...
T Consensus 92 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~ 171 (265)
T 1h5q_A 92 PISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVF 171 (265)
T ss_dssp SEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEETTEECSCHH
T ss_pred CCCEEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhccccccccccccccc
Confidence 479999884310 1111 12223 479999999877654321 222
Q ss_pred ccchHH--HHHHHHHHHHHHhCCCCEEEEecCCcccCCCCC--cce--eeecCCCCCCccCHHHHHHHHHHHhhCCC--C
Q 021928 204 LMKGNA--RKLAEQDESMLMASGIPYTIIRTGVLQNTPGGK--QGF--QFEEGCAANGSLSKEDAAFICVEALESIP--Q 275 (305)
Q Consensus 204 ~~~~~~--~~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~--~~~--~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~ 275 (305)
|..++. ..+.+.....+...++++++||||++....... ... .+........+++++|+|++++.++.++. .
T Consensus 172 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~ 251 (265)
T 1h5q_A 172 YNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMDKKIRDHQASNIPLNRFAQPEEMTGQAILLLSDHATYM 251 (265)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSCHHHHHHHHHTCTTSSCBCGGGGHHHHHHHHSGGGTTC
T ss_pred cHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCccccccccccchhHHHHHHhcCcccCCCCHHHHHHHHHhhccCchhcC
Confidence 322221 111111222234568999999999965332111 000 00011122357899999999999997643 4
Q ss_pred CCcEEEEecCC
Q 021928 276 TGLIFEVVNGE 286 (305)
Q Consensus 276 ~~~~~~v~~g~ 286 (305)
.|+.|++.+|.
T Consensus 252 ~G~~~~v~gG~ 262 (265)
T 1h5q_A 252 TGGEYFIDGGQ 262 (265)
T ss_dssp CSCEEEECTTG
T ss_pred cCcEEEecCCE
Confidence 68999999874
|
| >1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=2.8e-17 Score=145.56 Aligned_cols=182 Identities=9% Similarity=0.078 Sum_probs=117.3
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcC----ccEEEECCcch
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRG----VRSIICPSEGF 173 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~----~d~Vi~~~~g~ 173 (305)
||+|+||||+|+||++++++|+++|++|++++|++++... . +.+|++|.++++++++. +|++||+++..
T Consensus 1 mk~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~------~-~~~Dl~~~~~v~~~~~~~~~~id~lv~~Ag~~ 73 (257)
T 1fjh_A 1 MSIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIA------D-LSTAEGRKQAIADVLAKCSKGMDGLVLCAGLG 73 (257)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC------C-TTSHHHHHHHHHHHHTTCTTCCSEEEECCCCC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhcc------c-cccCCCCHHHHHHHHHHhCCCCCEEEECCCCC
Confidence 4789999999999999999999999999999998765432 1 67899999999988864 49999884310
Q ss_pred -------------------Hhh----hhhhcCCCEEEEEccccccc----------------------------CCCCcc
Q 021928 174 -------------------ISN----AGSLKGVQHVILLSQLSVYR----------------------------GSGGIQ 202 (305)
Q Consensus 174 -------------------~~~----~a~~~gv~~~V~iSS~~~~~----------------------------~~~~~~ 202 (305)
+.. ..++.+.++||++||..++. +.....
T Consensus 74 ~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (257)
T 1fjh_A 74 PQTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQGGNL 153 (257)
T ss_dssp TTCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHHHHHHHTCCTTHHHH
T ss_pred CCcccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhhhccccccchhhhhhcccchhhhhhhhhcccCCCCcc
Confidence 111 22345678999999998872 111222
Q ss_pred cccchHHH--HHHHHHHHHHHhCCCCEEEEecCCcccCCCCC---cce---eeec-CCCCCCccCHHHHHHHHHHHhhCC
Q 021928 203 ALMKGNAR--KLAEQDESMLMASGIPYTIIRTGVLQNTPGGK---QGF---QFEE-GCAANGSLSKEDAAFICVEALESI 273 (305)
Q Consensus 203 ~~~~~~~~--~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~---~~~---~~~~-~~~~~~~Is~~DvA~~iv~~l~~~ 273 (305)
.|..++.. .+.+.....+...++++++|+||++....... ... .... ......+++++|+|++++.++..+
T Consensus 154 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~~~~ 233 (257)
T 1fjh_A 154 AYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGESIAKFVPPMGRRAEPSEMASVIAFLMSPA 233 (257)
T ss_dssp HHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC---------------------CCCSTTSCCCTHHHHHHHHHHTSGG
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCccchhhccchhHHHHHHhcccccCCCCCHHHHHHHHHHHhCch
Confidence 23222211 11111122234579999999999964332111 000 0000 112235789999999999999765
Q ss_pred C--CCCcEEEEecCC
Q 021928 274 P--QTGLIFEVVNGE 286 (305)
Q Consensus 274 ~--~~~~~~~v~~g~ 286 (305)
. ..|+.+.+.+|.
T Consensus 234 ~~~~tG~~~~vdgG~ 248 (257)
T 1fjh_A 234 ASYVHGAQIVIDGGI 248 (257)
T ss_dssp GTTCCSCEEEESTTH
T ss_pred hcCCcCCEEEECCCc
Confidence 3 468999998774
|
| >1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=6.4e-17 Score=145.07 Aligned_cols=190 Identities=15% Similarity=0.100 Sum_probs=126.7
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEc-Ccchhhhh---c----CCCcEEeecCCCCH----HHHHHHhc---
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVK-DKRNAMES---F----GTYVESMAGDASNK----KFLKTALR--- 161 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R-~~~~~~~~---~----~~~v~~v~~D~~d~----~~~~~~~~--- 161 (305)
.+|+++||||+|+||++++++|+++|++|++++| ++++..+. + +.++.++.+|++|. +++.++++
T Consensus 10 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 89 (276)
T 1mxh_A 10 ECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSF 89 (276)
T ss_dssp -CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHHHHH
Confidence 3589999999999999999999999999999999 76543221 1 45688999999998 88877765
Q ss_pred ----CccEEEECCcc----------------------h---------------Hhhhhhh---cCC------CEEEEEcc
Q 021928 162 ----GVRSIICPSEG----------------------F---------------ISNAGSL---KGV------QHVILLSQ 191 (305)
Q Consensus 162 ----~~d~Vi~~~~g----------------------~---------------~~~~a~~---~gv------~~~V~iSS 191 (305)
++|++||+++- . +..++.. .+. ++||++||
T Consensus 90 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~g~iv~isS 169 (276)
T 1mxh_A 90 RAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCD 169 (276)
T ss_dssp HHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECC
T ss_pred HhcCCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHhcCCCCCCCCcEEEEECc
Confidence 78999988431 0 0111111 344 79999999
Q ss_pred cccccCCCCcccccchHHH--HHHHHHHHHHHhCCCCEEEEecCCcccCCCCCcce--eeecCCCCCC-ccCHHHHHHHH
Q 021928 192 LSVYRGSGGIQALMKGNAR--KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGF--QFEEGCAANG-SLSKEDAAFIC 266 (305)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~--~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~~~~--~~~~~~~~~~-~Is~~DvA~~i 266 (305)
..++.+..+...|..++.. .+.+.....+...+++++.|+||++.......... .+........ +.+++|+|+++
T Consensus 170 ~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~p~~r~~~~~~dva~~v 249 (276)
T 1mxh_A 170 AMTDLPLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPAMPQETQEEYRRKVPLGQSEASAAQIADAI 249 (276)
T ss_dssp GGGGSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCSSSCHHHHHHHHTTCTTTSCCBCHHHHHHHH
T ss_pred hhhcCCCCCCeehHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCCccCCHHHHHHHHhcCCCCCCCCCHHHHHHHH
Confidence 9888766555555544321 11222223345579999999999965441100000 0001111223 78999999999
Q ss_pred HHHhhCCC--CCCcEEEEecCC
Q 021928 267 VEALESIP--QTGLIFEVVNGE 286 (305)
Q Consensus 267 v~~l~~~~--~~~~~~~v~~g~ 286 (305)
+.++..+. ..|+.+++.+|.
T Consensus 250 ~~l~s~~~~~~tG~~~~vdgG~ 271 (276)
T 1mxh_A 250 AFLVSKDAGYITGTTLKVDGGL 271 (276)
T ss_dssp HHHHSGGGTTCCSCEEEESTTG
T ss_pred HHHhCccccCccCcEEEECCch
Confidence 99997543 368999998774
|
| >3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.73 E-value=4.2e-17 Score=145.21 Aligned_cols=192 Identities=17% Similarity=0.102 Sum_probs=125.7
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh-------hcCCCcEEeecCCCCHHHHHHHhc-------
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME-------SFGTYVESMAGDASNKKFLKTALR------- 161 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~-------~~~~~v~~v~~D~~d~~~~~~~~~------- 161 (305)
.++++++||||+|+||++++++|+++|++|+++.|+.....+ ..+.++.++.+|++|.+++.++++
T Consensus 5 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 84 (264)
T 3i4f_A 5 RFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSHFG 84 (264)
T ss_dssp -CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred cccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhC
Confidence 356899999999999999999999999999999887644211 123468999999999998888776
Q ss_pred CccEEEECCc--c----h----------------------Hhhh----hhhcCCCEEEEEccccccc--CCCCcccccch
Q 021928 162 GVRSIICPSE--G----F----------------------ISNA----GSLKGVQHVILLSQLSVYR--GSGGIQALMKG 207 (305)
Q Consensus 162 ~~d~Vi~~~~--g----~----------------------~~~~----a~~~gv~~~V~iSS~~~~~--~~~~~~~~~~~ 207 (305)
++|++|++++ . . +..+ .++.+..+||++||.++.. +......|..+
T Consensus 85 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~Y~as 164 (264)
T 3i4f_A 85 KIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQNFGRIINYGFQGADSAPGWIYRSAFAAA 164 (264)
T ss_dssp CCCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTTGGGCCCCTTCHHHHHH
T ss_pred CCCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCeEEEEeechhcccCCCCCCchhHHH
Confidence 7899998854 1 0 1111 2456778999999885542 22223344333
Q ss_pred HH--HHHHHHHHHHHHhCCCCEEEEecCCcccCCCCCc-c---eeeecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcE
Q 021928 208 NA--RKLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQ-G---FQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLI 279 (305)
Q Consensus 208 ~~--~~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~~-~---~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~ 279 (305)
++ ..+.+.....+...+++++.|+||++........ . ...........+.+++|+|++++.++..+. ..|++
T Consensus 165 Kaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v~~l~s~~~~~itG~~ 244 (264)
T 3i4f_A 165 KVGLVSLTKTVAYEEAEYGITANMVCPGDIIGEMKEATIQEARQLKEHNTPIGRSGTGEDIARTISFLCEDDSDMITGTI 244 (264)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEECCCCGGGGSCCHHHHHHC--------CCCCHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred HHHHHHHHHHHHHHhhhcCcEEEEEccCCccCccchhccHHHHHHHhhcCCCCCCcCHHHHHHHHHHHcCcccCCCCCcE
Confidence 22 1111222223445799999999999643321110 0 001111222456789999999999997644 46899
Q ss_pred EEEecCCc
Q 021928 280 FEVVNGEE 287 (305)
Q Consensus 280 ~~v~~g~~ 287 (305)
+++.+|-.
T Consensus 245 i~vdGG~~ 252 (264)
T 3i4f_A 245 IEVTGAVD 252 (264)
T ss_dssp EEESCSCC
T ss_pred EEEcCcee
Confidence 99998753
|
| >1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.73 E-value=5.8e-17 Score=145.66 Aligned_cols=179 Identities=19% Similarity=0.136 Sum_probs=117.9
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh--------cCCCcEEeecCCCCHHHHHHHhc-------
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES--------FGTYVESMAGDASNKKFLKTALR------- 161 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~--------~~~~v~~v~~D~~d~~~~~~~~~------- 161 (305)
.+++||||||+|+||++++++|+++|++|++++|++++..+. .+..+.++.+|++|.+++.++++
T Consensus 31 ~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 110 (279)
T 1xg5_A 31 RDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHS 110 (279)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHhCC
Confidence 458999999999999999999999999999999987653321 12357889999999998887775
Q ss_pred CccEEEECCcc----h--------------------------HhhhhhhcCC--CEEEEEccccccc--CCCCcccccch
Q 021928 162 GVRSIICPSEG----F--------------------------ISNAGSLKGV--QHVILLSQLSVYR--GSGGIQALMKG 207 (305)
Q Consensus 162 ~~d~Vi~~~~g----~--------------------------~~~~a~~~gv--~~~V~iSS~~~~~--~~~~~~~~~~~ 207 (305)
++|+||++++. . +...+++.++ ++||++||..++. +......|...
T Consensus 111 ~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~Y~~s 190 (279)
T 1xg5_A 111 GVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYSAT 190 (279)
T ss_dssp CCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCSCGGGHHHHHH
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCceEEEEcChhhcccCCCCCCchhHHH
Confidence 78999988431 0 1223445565 7999999998773 33333344333
Q ss_pred HHH--HHHHHHHHHHH--hCCCCEEEEecCCcccCCC----CCcceeeecCCCCCCccCHHHHHHHHHHHhhCCCC
Q 021928 208 NAR--KLAEQDESMLM--ASGIPYTIIRTGVLQNTPG----GKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQ 275 (305)
Q Consensus 208 ~~~--~~~~~aE~~l~--~~gi~~tilRPg~l~~~~~----~~~~~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~~ 275 (305)
+.. .+.+.....+. ..+++++.|+||++..... ...............+++++|+|++++.++..+..
T Consensus 191 K~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~i~~l~~~~~~ 266 (279)
T 1xg5_A 191 KYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDKDPEKAAATYEQMKCLKPEDVAEAVIYVLSTPAH 266 (279)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTTCHHHHHHHHC---CBCHHHHHHHHHHHHHSCTT
T ss_pred HHHHHHHHHHHHHHHhhcCCCeEEEEEecCcccchhhhhhcccChhHHhhhcccccCCCHHHHHHHHHHHhcCCcc
Confidence 221 11122222334 5789999999999643321 00000000001123468999999999999987653
|
| >4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.73 E-value=1.4e-16 Score=143.74 Aligned_cols=191 Identities=16% Similarity=0.116 Sum_probs=120.1
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEc-Ccchhhh------hcCCCcEEeecCCCCHHHHHHHhc-------
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVK-DKRNAME------SFGTYVESMAGDASNKKFLKTALR------- 161 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R-~~~~~~~------~~~~~v~~v~~D~~d~~~~~~~~~------- 161 (305)
..+++++||||+|+||++++++|+++|++|++++| +++...+ ..+.++.++.+|++|.+++.++++
T Consensus 27 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 106 (280)
T 4da9_A 27 KARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAEFG 106 (280)
T ss_dssp CCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHHHS
T ss_pred cCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 34689999999999999999999999999999986 4433211 124578999999999888777665
Q ss_pred CccEEEECCcc--h--------------------------H----hhhhhhcC---CCEEEEEcccccccCCCCcccccc
Q 021928 162 GVRSIICPSEG--F--------------------------I----SNAGSLKG---VQHVILLSQLSVYRGSGGIQALMK 206 (305)
Q Consensus 162 ~~d~Vi~~~~g--~--------------------------~----~~~a~~~g---v~~~V~iSS~~~~~~~~~~~~~~~ 206 (305)
++|++|++++. . + ....++.+ ..+||++||..++.+......|..
T Consensus 107 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~a 186 (280)
T 4da9_A 107 RIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVMTSPERLDYCM 186 (280)
T ss_dssp CCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC-------CCHHHHH
T ss_pred CCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhccCCCCccHHHH
Confidence 78999987431 0 0 01122223 568999999988776655555554
Q ss_pred hHHH--HHHHHHHHHHHhCCCCEEEEecCCcccCCCCC--cc--eeeec-CCCCCCccCHHHHHHHHHHHhhCCC--CCC
Q 021928 207 GNAR--KLAEQDESMLMASGIPYTIIRTGVLQNTPGGK--QG--FQFEE-GCAANGSLSKEDAAFICVEALESIP--QTG 277 (305)
Q Consensus 207 ~~~~--~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~--~~--~~~~~-~~~~~~~Is~~DvA~~iv~~l~~~~--~~~ 277 (305)
++.. .+.+.....+...+++++.|+||++....... .. ..+.. ......+.+++|+|++++.++.+.. ..|
T Consensus 187 sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~itG 266 (280)
T 4da9_A 187 SKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDMTAAVSGKYDGLIESGLVPMRRWGEPEDIGNIVAGLAGGQFGFATG 266 (280)
T ss_dssp HHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC----------------------CCBCHHHHHHHHHHHHTSTTGGGTT
T ss_pred HHHHHHHHHHHHHHHHHHhCcEEEEEeecCCcCCchhhcchhHHHHHhhcCCCcCCcCCHHHHHHHHHHHhCccccCCCC
Confidence 3321 11122223344578999999999965332110 00 00101 1122456789999999999997655 468
Q ss_pred cEEEEecCC
Q 021928 278 LIFEVVNGE 286 (305)
Q Consensus 278 ~~~~v~~g~ 286 (305)
+++++.+|.
T Consensus 267 ~~i~vdGG~ 275 (280)
T 4da9_A 267 SVIQADGGL 275 (280)
T ss_dssp CEEEESTTC
T ss_pred CEEEECCCc
Confidence 999999875
|
| >3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=4.5e-16 Score=136.14 Aligned_cols=183 Identities=11% Similarity=-0.002 Sum_probs=121.6
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh-------hcCCCcEEeecCCCCHHHHHHHhc-------Cc
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME-------SFGTYVESMAGDASNKKFLKTALR-------GV 163 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~-------~~~~~v~~v~~D~~d~~~~~~~~~-------~~ 163 (305)
+|+++||||+|+||++++++|+++|++|++++|+.++..+ ..+.++.++.+|++|.+++.++++ ++
T Consensus 2 ~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i 81 (235)
T 3l77_A 2 MKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERFGDV 81 (235)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHHSSC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhcCCC
Confidence 5899999999999999999999999999999999765322 234678999999999999988886 67
Q ss_pred cEEEECCcc----h----------------------Hhhhhh---hcCCCEEEEEcccccccCCCCcccccchHHHHHHH
Q 021928 164 RSIICPSEG----F----------------------ISNAGS---LKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAE 214 (305)
Q Consensus 164 d~Vi~~~~g----~----------------------~~~~a~---~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~~~~~ 214 (305)
|++||+++- . +..++. +.+..++|++||.....+......|..++.....
T Consensus 82 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~sKaa~~~- 160 (235)
T 3l77_A 82 DVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRTGGLALVTTSDVSARLIPYGGGYVSTKWAARA- 160 (235)
T ss_dssp SEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSCCTTCHHHHHHHHHHHH-
T ss_pred CEEEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEEecchhcccCCCcchHHHHHHHHHH-
Confidence 999988431 0 111111 1234577888777666554444445443321111
Q ss_pred HHHH-HHHhCCCCEEEEecCCcccCCCCCcceeeecCCCCCCccCHHHHHHHHHHHhhCCCC--CCcEEEEecC
Q 021928 215 QDES-MLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQ--TGLIFEVVNG 285 (305)
Q Consensus 215 ~aE~-~l~~~gi~~tilRPg~l~~~~~~~~~~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~~--~~~~~~v~~g 285 (305)
..+. .+...+++++.++||++......... .......+++++|+|++++.++.++.. .++.+...++
T Consensus 161 ~~~~l~~~~~~i~v~~v~PG~v~T~~~~~~~----~~~~~~~~~~p~dva~~v~~l~~~~~~~~~~~~~~~~~~ 230 (235)
T 3l77_A 161 LVRTFQIENPDVRFFELRPGAVDTYFGGSKP----GKPKEKGYLKPDEIAEAVRCLLKLPKDVRVEELMLRSVY 230 (235)
T ss_dssp HHHHHHHHCTTSEEEEEEECSBSSSTTTCCS----CCCGGGTCBCHHHHHHHHHHHHTSCTTCCCCEEEECCTT
T ss_pred HHHHHhhcCCCeEEEEEeCCccccccccccC----CcccccCCCCHHHHHHHHHHHHcCCCCCccceEEEeecc
Confidence 1111 12346899999999997543322111 111223678999999999999987763 3444444433
|
| >3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=1.7e-16 Score=140.63 Aligned_cols=189 Identities=13% Similarity=0.077 Sum_probs=124.6
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh---hcCCCcEEeecCCCCHHHHHHHhc-------CccEEEE
Q 021928 99 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALR-------GVRSIIC 168 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~---~~~~~v~~v~~D~~d~~~~~~~~~-------~~d~Vi~ 168 (305)
|+++||||+|+||++++++|+++|++|+++.|++++..+ .++.++.++.+|++|.++++++++ ++|++||
T Consensus 1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lvn 80 (248)
T 3asu_A 1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWCNIDILVN 80 (248)
T ss_dssp CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHTSCTTTCCCCEEEE
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEE
Confidence 589999999999999999999999999999999765432 234568899999999999988875 6799998
Q ss_pred CCcc-----h----------------------Hh----hhhhhcCCCEEEEEcccccccCCCCcccccchHHH--HHHHH
Q 021928 169 PSEG-----F----------------------IS----NAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--KLAEQ 215 (305)
Q Consensus 169 ~~~g-----~----------------------~~----~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~--~~~~~ 215 (305)
+++- . +. ..+++.+..+||++||..++.+..+...|..++.. .+.+.
T Consensus 81 nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~ 160 (248)
T 3asu_A 81 NAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLN 160 (248)
T ss_dssp CCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHH
T ss_pred CCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEccchhccCCCCCchHHHHHHHHHHHHHH
Confidence 7331 0 01 11234567899999999887665555555443321 11111
Q ss_pred HHHHHHhCCCCEEEEecCCcc-cCCCCC----cceeeecCCCCCCccCHHHHHHHHHHHhhCCC-CCCcEEEEecCCc
Q 021928 216 DESMLMASGIPYTIIRTGVLQ-NTPGGK----QGFQFEEGCAANGSLSKEDAAFICVEALESIP-QTGLIFEVVNGEE 287 (305)
Q Consensus 216 aE~~l~~~gi~~tilRPg~l~-~~~~~~----~~~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~-~~~~~~~v~~g~~ 287 (305)
....+...+++++.|+||++. ...... ..............++++|+|++++.++.++. ..++.+.+..+..
T Consensus 161 la~e~~~~gi~v~~v~PG~v~gT~~~~~~~~~~~~~~~~~~~~~~~~~p~dvA~~v~~l~s~~~~~~g~~i~v~~~~~ 238 (248)
T 3asu_A 161 LRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDDGKAEKTYQNTVALTPEDVSEAVWWVSTLPAHVNINTLEMMPVTQ 238 (248)
T ss_dssp HHHHTTTSCCEEEEEEECSBCC----------------------CCBCHHHHHHHHHHHHHSCTTCCCCEEEECCTTC
T ss_pred HHHHhhhcCcEEEEEeccccccCcchhhcccCchHHHHHHHhccCCCCHHHHHHHHHHHhcCCccceeeEEEEccccc
Confidence 122233468999999999975 322110 00000000011234799999999999998755 4567788776543
|
| >3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.73 E-value=1.7e-16 Score=142.50 Aligned_cols=190 Identities=14% Similarity=0.104 Sum_probs=126.3
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCc------------chhh------hhcCCCcEEeecCCCCHHHHH
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK------------RNAM------ESFGTYVESMAGDASNKKFLK 157 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~------------~~~~------~~~~~~v~~v~~D~~d~~~~~ 157 (305)
..+|++|||||+|+||++++++|+++|++|+++.|+. +... ...+.++.++.+|++|.++++
T Consensus 11 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~ 90 (278)
T 3sx2_A 11 LTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRESLS 90 (278)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHH
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHH
Confidence 3569999999999999999999999999999999872 2211 123457899999999999888
Q ss_pred HHhc-------CccEEEECCcch----------------------Hhhh----hhhc-CCCEEEEEcccccccCC----C
Q 021928 158 TALR-------GVRSIICPSEGF----------------------ISNA----GSLK-GVQHVILLSQLSVYRGS----G 199 (305)
Q Consensus 158 ~~~~-------~~d~Vi~~~~g~----------------------~~~~----a~~~-gv~~~V~iSS~~~~~~~----~ 199 (305)
++++ .+|++||+++-. +..+ ..+. ...+||++||..++.+. .
T Consensus 91 ~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~ 170 (278)
T 3sx2_A 91 AALQAGLDELGRLDIVVANAGIAPMSAGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVGSADP 170 (278)
T ss_dssp HHHHHHHHHHCCCCEEEECCCCCCCSSTHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCCCSSH
T ss_pred HHHHHHHHHcCCCCEEEECCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHHhcCCCccCCC
Confidence 8776 789999884310 1111 2223 25699999998876543 2
Q ss_pred CcccccchHH--HHHHHHHHHHHHhCCCCEEEEecCCcccCCCCCcc---------------eeeecCCCCCCccCHHHH
Q 021928 200 GIQALMKGNA--RKLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQG---------------FQFEEGCAANGSLSKEDA 262 (305)
Q Consensus 200 ~~~~~~~~~~--~~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~~~---------------~~~~~~~~~~~~Is~~Dv 262 (305)
....|..++. ..+.+.....+...+++++.|+||++......... ..+..... ..+++++|+
T Consensus 171 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~p~dv 249 (278)
T 3sx2_A 171 GSVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMINNEFTREWLAKMAAATDTPGAMGNAMP-VEVLAPEDV 249 (278)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHHHHHHHCC--CTTSCSSS-CSSBCHHHH
T ss_pred CchHhHHHHHHHHHHHHHHHHHHhccCcEEEEEecCCccCccchhhhHHHHHhhccchhhhhhhhhhhcC-cCcCCHHHH
Confidence 2223333221 11112222334457899999999996543221100 00111111 467799999
Q ss_pred HHHHHHHhhCCC--CCCcEEEEecCC
Q 021928 263 AFICVEALESIP--QTGLIFEVVNGE 286 (305)
Q Consensus 263 A~~iv~~l~~~~--~~~~~~~v~~g~ 286 (305)
|++++.++.+.. ..|+++++.+|.
T Consensus 250 A~~v~~l~s~~~~~itG~~i~vdGG~ 275 (278)
T 3sx2_A 250 ANAVAWLVSDQARYITGVTLPVDAGF 275 (278)
T ss_dssp HHHHHHHTSGGGTTCCSCEEEESTTT
T ss_pred HHHHHHHhCcccccccCCEEeECCCc
Confidence 999999996543 468999998774
|
| >3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.73 E-value=5.4e-17 Score=145.94 Aligned_cols=191 Identities=14% Similarity=0.119 Sum_probs=130.4
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchh---h--hhcCCCcEEeecCCCCHHHHHHHhc------Ccc
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA---M--ESFGTYVESMAGDASNKKFLKTALR------GVR 164 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~---~--~~~~~~v~~v~~D~~d~~~~~~~~~------~~d 164 (305)
..+|+++||||+|+||++++++|+++|++|+++.|++... . ...+.++.++.+|++|.+++.++.+ ++|
T Consensus 29 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~g~iD 108 (273)
T 3uf0_A 29 LAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDGVKEVADEIADGGGSAEAVVADLADLEGAANVAEELAATRRVD 108 (273)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTHHHHHHHHHHTTTCEEEEEECCTTCHHHHHHHHHHHHHHSCCC
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHhcCCCc
Confidence 3569999999999999999999999999999999775321 1 1123568899999999888776643 789
Q ss_pred EEEECCcc----h----------------------Hhh----hhhhcCCCEEEEEcccccccCCCCcccccchHHH--HH
Q 021928 165 SIICPSEG----F----------------------ISN----AGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--KL 212 (305)
Q Consensus 165 ~Vi~~~~g----~----------------------~~~----~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~--~~ 212 (305)
++|++++. . +.. ..++.+..+||++||..++.+......|..++.. .+
T Consensus 109 ~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~~~~Y~asKaa~~~l 188 (273)
T 3uf0_A 109 VLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASMLSFQGGRNVAAYAASKHAVVGL 188 (273)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSCHHHHHHHHHHHHH
T ss_pred EEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchHhcCCCCCChhHHHHHHHHHHH
Confidence 99988431 0 111 1244567899999999888776666666544321 12
Q ss_pred HHHHHHHHHhCCCCEEEEecCCcccCCCC----Ccce--eeecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEEEEec
Q 021928 213 AEQDESMLMASGIPYTIIRTGVLQNTPGG----KQGF--QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVN 284 (305)
Q Consensus 213 ~~~aE~~l~~~gi~~tilRPg~l~~~~~~----~~~~--~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~v~~ 284 (305)
.+.....+...+++++.|+||++...... .... .+........+.+++|+|++++.++.+.. ..|++++|.+
T Consensus 189 ~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~v~~L~s~~a~~itG~~i~vdG 268 (273)
T 3uf0_A 189 TRALASEWAGRGVGVNALAPGYVVTANTAALRADDERAAEITARIPAGRWATPEDMVGPAVFLASDAASYVHGQVLAVDG 268 (273)
T ss_dssp HHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTSHHHHHHHHHHSTTSSCBCGGGGHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred HHHHHHHHhhcCcEEEEEEeCCCcCCchhhcccCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCchhcCCcCCEEEECc
Confidence 22222334557999999999996432210 0000 00111223456789999999999997543 4689999998
Q ss_pred CC
Q 021928 285 GE 286 (305)
Q Consensus 285 g~ 286 (305)
|.
T Consensus 269 G~ 270 (273)
T 3uf0_A 269 GW 270 (273)
T ss_dssp TG
T ss_pred Cc
Confidence 75
|
| >4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* | Back alignment and structure |
|---|
Probab=99.72 E-value=4e-17 Score=146.92 Aligned_cols=191 Identities=13% Similarity=0.090 Sum_probs=131.8
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh-------hcCCCcEEeecCCCCHHHHHHHhc-------
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME-------SFGTYVESMAGDASNKKFLKTALR------- 161 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~-------~~~~~v~~v~~D~~d~~~~~~~~~------- 161 (305)
..+|+++||||+|+||++++++|+++|++|++++|+.++..+ ..+.++.++.+|++|.++++++++
T Consensus 25 l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 104 (277)
T 4fc7_A 25 LRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKEFG 104 (277)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 346999999999999999999999999999999999765322 134578999999999988877765
Q ss_pred CccEEEECCcch--------------------------Hhhh----hhhcCCCEEEEEcccccccCCCCcccccchHH--
Q 021928 162 GVRSIICPSEGF--------------------------ISNA----GSLKGVQHVILLSQLSVYRGSGGIQALMKGNA-- 209 (305)
Q Consensus 162 ~~d~Vi~~~~g~--------------------------~~~~----a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~-- 209 (305)
.+|++||+++.. +..+ ..+.+..+||++||..++.+......|..++.
T Consensus 105 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~ 184 (277)
T 4fc7_A 105 RIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGGVIVNITATLGNRGQALQVHAGSAKAAV 184 (277)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCSHHHHTCTTCHHHHHHHHHH
T ss_pred CCCEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCCCCcHHHHHHHHHH
Confidence 789999884410 1111 23345679999999988776665555544332
Q ss_pred HHHHHHHHHHHHhCCCCEEEEecCCcccCCC-----CCcce--eeecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEE
Q 021928 210 RKLAEQDESMLMASGIPYTIIRTGVLQNTPG-----GKQGF--QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIF 280 (305)
Q Consensus 210 ~~~~~~aE~~l~~~gi~~tilRPg~l~~~~~-----~~~~~--~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~ 280 (305)
..+.+.....+...+++++.|+||++..... ..... ..........+.+++|+|++++.++.... ..|+++
T Consensus 185 ~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~fL~s~~~~~itG~~i 264 (277)
T 4fc7_A 185 DAMTRHLAVEWGPQNIRVNSLAPGPISGTEGLRRLGGPQASLSTKVTASPLQRLGNKTEIAHSVLYLASPLASYVTGAVL 264 (277)
T ss_dssp HHHHHHHHHHHGGGTEEEEEEEECCBSSSHHHHHHSCCHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred HHHHHHHHHHhhhcCeEEEEEEECCEecchhhhhccCCHHHHHHHhccCCCCCCcCHHHHHHHHHHHcCCccCCcCCCEE
Confidence 1122222233455799999999999653210 00000 00112223456789999999999997533 468999
Q ss_pred EEecCC
Q 021928 281 EVVNGE 286 (305)
Q Consensus 281 ~v~~g~ 286 (305)
++.+|.
T Consensus 265 ~vdGG~ 270 (277)
T 4fc7_A 265 VADGGA 270 (277)
T ss_dssp EESTTH
T ss_pred EECCCc
Confidence 999874
|
| >2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* | Back alignment and structure |
|---|
Probab=99.72 E-value=1.7e-16 Score=140.31 Aligned_cols=177 Identities=13% Similarity=0.133 Sum_probs=120.3
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh------cCCCcEEeecCCCCHHHHHHHhc-------Cc
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GV 163 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~~~v~~v~~D~~d~~~~~~~~~-------~~ 163 (305)
++|+++||||+|+||++++++|+++|++|+++.|++++..+. .+.++.++.+|++|.+++.++++ ++
T Consensus 6 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i 85 (247)
T 2jah_A 6 QGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEALGGL 85 (247)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 458999999999999999999999999999999997653321 24468899999999988887765 78
Q ss_pred cEEEECCcc----h----------------------Hh----hhhhhcCCCEEEEEcccccccCCCCcccccchHH--HH
Q 021928 164 RSIICPSEG----F----------------------IS----NAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA--RK 211 (305)
Q Consensus 164 d~Vi~~~~g----~----------------------~~----~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~--~~ 211 (305)
|++|++++- . +. ....+.+ .+||++||..++.+......|..++. ..
T Consensus 86 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~asK~a~~~ 164 (247)
T 2jah_A 86 DILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSK-GTVVQMSSIAGRVNVRNAAVYQATKFGVNA 164 (247)
T ss_dssp SEEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTCCCTTCHHHHHHHHHHHH
T ss_pred CEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC-CEEEEEccHHhcCCCCCCcHHHHHHHHHHH
Confidence 999987431 0 11 1123345 89999999988766555555544332 12
Q ss_pred HHHHHHHHHHhCCCCEEEEecCCcccCCCCC---cce--eeecCCCCCCccCHHHHHHHHHHHhhCCC
Q 021928 212 LAEQDESMLMASGIPYTIIRTGVLQNTPGGK---QGF--QFEEGCAANGSLSKEDAAFICVEALESIP 274 (305)
Q Consensus 212 ~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~---~~~--~~~~~~~~~~~Is~~DvA~~iv~~l~~~~ 274 (305)
+.+.....+...+++++.|+||++....... ... .+........+++++|+|++++.++.++.
T Consensus 165 ~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~~l~s~~~ 232 (247)
T 2jah_A 165 FSETLRQEVTERGVRVVVIEPGTTDTELRGHITHTATKEMYEQRISQIRKLQAQDIAEAVRYAVTAPH 232 (247)
T ss_dssp HHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCCCHHHHHHHHHHTTTSCCBCHHHHHHHHHHHHHSCT
T ss_pred HHHHHHHHhcccCcEEEEEECCCCCCcchhcccchhhHHHHHhcccccCCCCHHHHHHHHHHHhCCCc
Confidence 2233334455689999999999964332110 000 00000011124899999999999998654
|
| >4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=99.72 E-value=1.6e-17 Score=149.28 Aligned_cols=192 Identities=16% Similarity=0.116 Sum_probs=133.4
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh------cCCCcEEeecCCCCHHHHHHHhc-------
Q 021928 95 PEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR------- 161 (305)
Q Consensus 95 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~~~v~~v~~D~~d~~~~~~~~~------- 161 (305)
+..+|++|||||+|+||++++++|+++|++|+++.|++++..+. .+.++.++.+|++|.+++.++++
T Consensus 23 ~l~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 102 (271)
T 4ibo_A 23 DLGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQGI 102 (271)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHHTC
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHCC
Confidence 44569999999999999999999999999999999987653321 24578999999999998888776
Q ss_pred CccEEEECCcch--------------------------H----hhhhhhcCCCEEEEEcccccccCCCCcccccchHH--
Q 021928 162 GVRSIICPSEGF--------------------------I----SNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA-- 209 (305)
Q Consensus 162 ~~d~Vi~~~~g~--------------------------~----~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~-- 209 (305)
++|++|++++.. + ....++.+..+||++||.....+......|..++.
T Consensus 103 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~asKaa~ 182 (271)
T 4ibo_A 103 DVDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRGYGKIVNIGSLTSELARATVAPYTVAKGGI 182 (271)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBCTTCHHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCCCCCCchhHHHHHHHH
Confidence 689999884310 1 11233456679999999988776666556654432
Q ss_pred HHHHHHHHHHHHhCCCCEEEEecCCcccCCCCC----cc--eeeecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEEE
Q 021928 210 RKLAEQDESMLMASGIPYTIIRTGVLQNTPGGK----QG--FQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFE 281 (305)
Q Consensus 210 ~~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~----~~--~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~ 281 (305)
..+.+.....+...+++++.|+||++....... .. ..+........+.+++|+|++++.++.... ..|++++
T Consensus 183 ~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~v~~L~s~~~~~itG~~i~ 262 (271)
T 4ibo_A 183 KMLTRAMAAEWAQYGIQANAIGPGYMLTDMNQALIDNPEFDAWVKARTPAKRWGKPQELVGTAVFLSASASDYVNGQIIY 262 (271)
T ss_dssp HHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHHCHHHHHHHHHHSTTCSCBCGGGGHHHHHHHHSGGGTTCCSCEEE
T ss_pred HHHHHHHHHHHhhhCeEEEEEEeccEeCcchhhcccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCCCcEEE
Confidence 112222223345579999999999965332110 00 001111223456789999999999987543 4689999
Q ss_pred EecCC
Q 021928 282 VVNGE 286 (305)
Q Consensus 282 v~~g~ 286 (305)
+.+|.
T Consensus 263 vdGG~ 267 (271)
T 4ibo_A 263 VDGGM 267 (271)
T ss_dssp ESTTG
T ss_pred ECCCe
Confidence 99875
|
| >3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.72 E-value=6.2e-17 Score=148.81 Aligned_cols=207 Identities=14% Similarity=0.107 Sum_probs=137.1
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcC----------cchhhh------hcCCCcEEeecCCCCHHHHHHHh
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKD----------KRNAME------SFGTYVESMAGDASNKKFLKTAL 160 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~----------~~~~~~------~~~~~v~~v~~D~~d~~~~~~~~ 160 (305)
.++++|||||+|+||++++++|+++|++|++++|+ .+...+ ..+.++.++.+|++|.+++.+++
T Consensus 26 ~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~ 105 (322)
T 3qlj_A 26 DGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAAGLI 105 (322)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHH
Confidence 45899999999999999999999999999999987 222111 12456889999999998888777
Q ss_pred c-------CccEEEECCcch--------------------------Hhhhh----hhc---C---CCEEEEEcccccccC
Q 021928 161 R-------GVRSIICPSEGF--------------------------ISNAG----SLK---G---VQHVILLSQLSVYRG 197 (305)
Q Consensus 161 ~-------~~d~Vi~~~~g~--------------------------~~~~a----~~~---g---v~~~V~iSS~~~~~~ 197 (305)
+ .+|++|++++.. +..++ .+. + -.+||++||..++.+
T Consensus 106 ~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~ 185 (322)
T 3qlj_A 106 QTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGLQG 185 (322)
T ss_dssp HHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEECCHHHHHC
T ss_pred HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEEEcCHHHccC
Confidence 5 789999884310 11111 111 1 149999999988776
Q ss_pred CCCcccccchHHH--HHHHHHHHHHHhCCCCEEEEecCCcccCCCCCcceeeecCCCCCCccCHHHHHHHHHHHhhCCC-
Q 021928 198 SGGIQALMKGNAR--KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIP- 274 (305)
Q Consensus 198 ~~~~~~~~~~~~~--~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~~~~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~- 274 (305)
......|..+++. .+.+.....+...++.++.|+||..++...................++++|+|.+++.++....
T Consensus 186 ~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~t~~~~~~~~~~~~~~~~~~~~~~pedva~~v~~L~s~~~~ 265 (322)
T 3qlj_A 186 SVGQGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPSARTRMTETVFAEMMATQDQDFDAMAPENVSPLVVWLGSAEAR 265 (322)
T ss_dssp BTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECTTSCCSCCSCCC--------CCTTCGGGTHHHHHHHTSGGGG
T ss_pred CCCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEecCCCCCccchhhhhhhhhccccccCCCCHHHHHHHHHHHhCcccc
Confidence 6655556544321 1222222334457999999999932222111110011111222345789999999999996544
Q ss_pred -CCCcEEEEecCCc------------------CHHHHHHHHHHhhhhc
Q 021928 275 -QTGLIFEVVNGEE------------------KVSDWKKCFSRLMEKT 303 (305)
Q Consensus 275 -~~~~~~~v~~g~~------------------s~~d~~~~~~~l~~~~ 303 (305)
..|+++++.+|.. ++.++.+.+.++++..
T Consensus 266 ~itG~~i~vdGG~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~~~~ 313 (322)
T 3qlj_A 266 DVTGKVFEVEGGKIRVAEGWAHGPQIDKGARWDPAELGPVVADLLGKA 313 (322)
T ss_dssp GCCSCEEEEETTEEEEEECCEEEEEEECSSCCCGGGHHHHHHHHHHHS
T ss_pred CCCCCEEEECCCccccCCCcccccccCccCCCCHHHHHHHHHHHhhcc
Confidence 3689999988752 4589999999888753
|
| >4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=99.72 E-value=1.8e-16 Score=142.53 Aligned_cols=188 Identities=11% Similarity=0.049 Sum_probs=121.7
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh---hcCCCcEEeecCCCCHHHHHHHhc-------CccEE
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALR-------GVRSI 166 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~---~~~~~v~~v~~D~~d~~~~~~~~~-------~~d~V 166 (305)
.++++|||||+|+||++++++|+++|++|++++|+.++..+ ..+.++.++.+|++|.+++.++++ ++|++
T Consensus 27 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l 106 (272)
T 4dyv_A 27 GKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIGDDALCVPTDVTDPDSVRALFTATVEKFGRVDVL 106 (272)
T ss_dssp -CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTSCCEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 45899999999999999999999999999999999766433 234678999999999998887776 78999
Q ss_pred EECCcc-----h----------------------Hh----hhhhhcC--CCEEEEEcccccccCCCCcccccchHH--HH
Q 021928 167 ICPSEG-----F----------------------IS----NAGSLKG--VQHVILLSQLSVYRGSGGIQALMKGNA--RK 211 (305)
Q Consensus 167 i~~~~g-----~----------------------~~----~~a~~~g--v~~~V~iSS~~~~~~~~~~~~~~~~~~--~~ 211 (305)
|++++. . +. ...++.+ -.+||++||..++.+..+...|..++. ..
T Consensus 107 VnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~asKaa~~~ 186 (272)
T 4dyv_A 107 FNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATSPRPYSAPYTATKHAITG 186 (272)
T ss_dssp EECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTTSCCTTCHHHHHHHHHHHH
T ss_pred EECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhcCCCCCchHHHHHHHHHHH
Confidence 988331 0 01 1122233 469999999988877666656654432 11
Q ss_pred HHHHHHHHHHhCCCCEEEEecCCcccCCCCC--cce-eeecCCCCCCccCHHHHHHHHHHHhhCCCCC-CcEEEEec
Q 021928 212 LAEQDESMLMASGIPYTIIRTGVLQNTPGGK--QGF-QFEEGCAANGSLSKEDAAFICVEALESIPQT-GLIFEVVN 284 (305)
Q Consensus 212 ~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~--~~~-~~~~~~~~~~~Is~~DvA~~iv~~l~~~~~~-~~~~~v~~ 284 (305)
+.+.....+...++.++.|+||++....... ... ..........+.+++|+|++++.++..+... ...+.+..
T Consensus 187 l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~fL~s~~~~~~~~~i~i~~ 263 (272)
T 4dyv_A 187 LTKSTSLDGRVHDIACGQIDIGNADTPMAQKMKAGVPQADLSIKVEPVMDVAHVASAVVYMASLPLDANVQFMTIMA 263 (272)
T ss_dssp HHHHHHHHHGGGTEEEEEEEEEECC------------------------CHHHHHHHHHHHHHSCTTSCCCEEEEEE
T ss_pred HHHHHHHHhCccCEEEEEEEECcccChhhhhhcccchhhhhcccccCCCCHHHHHHHHHHHhCCCCcCccceEEEec
Confidence 2222223345679999999999864332110 000 0001112245679999999999999987643 33444443
|
| >1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.72 E-value=1.1e-16 Score=145.31 Aligned_cols=189 Identities=14% Similarity=0.112 Sum_probs=124.9
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh-----------cCCCcEEeecCCCCHHHHHHHhc----
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-----------FGTYVESMAGDASNKKFLKTALR---- 161 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~-----------~~~~v~~v~~D~~d~~~~~~~~~---- 161 (305)
.+++|+||||+|+||++++++|+++|++|++++|+.++..+. .+.++.++.+|++|.+++.++++
T Consensus 17 ~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 96 (303)
T 1yxm_A 17 QGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLD 96 (303)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHHHHH
Confidence 458999999999999999999999999999999987653211 24478999999999998888775
Q ss_pred ---CccEEEECCcc-----h---------------------Hhhhh----hhcCCCEEEEEcccccccCCCCcccccchH
Q 021928 162 ---GVRSIICPSEG-----F---------------------ISNAG----SLKGVQHVILLSQLSVYRGSGGIQALMKGN 208 (305)
Q Consensus 162 ---~~d~Vi~~~~g-----~---------------------~~~~a----~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~ 208 (305)
.+|+|||+++. . +..++ .+.+.++||++||.. ..+......|...+
T Consensus 97 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~-~~~~~~~~~Y~~sK 175 (303)
T 1yxm_A 97 TFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPT-KAGFPLAVHSGAAR 175 (303)
T ss_dssp HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCC-TTCCTTCHHHHHHH
T ss_pred HcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCeEEEEEeec-ccCCCcchhhHHHH
Confidence 48999998431 0 11111 123357899999987 44433333443322
Q ss_pred H--HHHHHHHHHHHHhCCCCEEEEecCCcccC--CCCCc----cee--eecCCCCCCccCHHHHHHHHHHHhhCCC--CC
Q 021928 209 A--RKLAEQDESMLMASGIPYTIIRTGVLQNT--PGGKQ----GFQ--FEEGCAANGSLSKEDAAFICVEALESIP--QT 276 (305)
Q Consensus 209 ~--~~~~~~aE~~l~~~gi~~tilRPg~l~~~--~~~~~----~~~--~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~ 276 (305)
. ..+.+.....+...++++++||||++... ..... ... +........+.+++|+|++++.++..+. ..
T Consensus 176 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~i~~l~~~~~~~~~ 255 (303)
T 1yxm_A 176 AGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAKRIGVPEEVSSVVCFLLSPAASFIT 255 (303)
T ss_dssp HHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGGSTTSSCBCTHHHHHHHHHHHSGGGTTCC
T ss_pred HHHHHHHHHHHHHhcccCeEEEEEecCCcccchhhhhccccchHHHHHHHhcCcccCCCCHHHHHHHHHHHhCcccccCC
Confidence 1 11112222223446999999999996543 11110 000 0011122346789999999999996543 46
Q ss_pred CcEEEEecCC
Q 021928 277 GLIFEVVNGE 286 (305)
Q Consensus 277 ~~~~~v~~g~ 286 (305)
|+.+++.+|.
T Consensus 256 G~~~~v~gG~ 265 (303)
T 1yxm_A 256 GQSVDVDGGR 265 (303)
T ss_dssp SCEEEESTTG
T ss_pred CcEEEECCCe
Confidence 8999999874
|
| >4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A | Back alignment and structure |
|---|
Probab=99.72 E-value=2.1e-16 Score=140.63 Aligned_cols=190 Identities=13% Similarity=0.151 Sum_probs=128.8
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh---hcCCCcEEeecCCCCHHHHHHHhc-------CccEE
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALR-------GVRSI 166 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~---~~~~~v~~v~~D~~d~~~~~~~~~-------~~d~V 166 (305)
.+|+++||||+|+||++++++|+++|++|+++.|++++..+ ..+.++.++.+|++|.+++.++++ .+|++
T Consensus 7 ~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~l 86 (255)
T 4eso_A 7 QGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPRVHALRSDIADLNEIAVLGAAAGQTLGAIDLL 86 (255)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSSEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 45899999999999999999999999999999999866432 234578999999999888776654 68999
Q ss_pred EECCcc----h----------------------Hhhhhhh--cCCCEEEEEcccccccCCCCcccccchHHH--HHHHHH
Q 021928 167 ICPSEG----F----------------------ISNAGSL--KGVQHVILLSQLSVYRGSGGIQALMKGNAR--KLAEQD 216 (305)
Q Consensus 167 i~~~~g----~----------------------~~~~a~~--~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~--~~~~~a 216 (305)
|++++. . +..++.. ..-.+||++||..++.+.++...|..++.. .+.+..
T Consensus 87 v~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~l 166 (255)
T 4eso_A 87 HINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSVADEGGHPGMSVYSASKAALVSFASVL 166 (255)
T ss_dssp EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCGGGSSBCTTBHHHHHHHHHHHHHHHHH
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECChhhcCCCCCchHHHHHHHHHHHHHHHH
Confidence 988431 0 1111111 112589999999888766666566544321 111222
Q ss_pred HHHHHhCCCCEEEEecCCcccCCCCCccee----------eecCCCCCCccCHHHHHHHHHHHhhCCC-CCCcEEEEecC
Q 021928 217 ESMLMASGIPYTIIRTGVLQNTPGGKQGFQ----------FEEGCAANGSLSKEDAAFICVEALESIP-QTGLIFEVVNG 285 (305)
Q Consensus 217 E~~l~~~gi~~tilRPg~l~~~~~~~~~~~----------~~~~~~~~~~Is~~DvA~~iv~~l~~~~-~~~~~~~v~~g 285 (305)
...+...+++++.|+||++........... .........+.+++|+|++++.++.+.. ..|+++++.+|
T Consensus 167 a~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~itG~~i~vdGG 246 (255)
T 4eso_A 167 AAELLPRGIRVNSVSPGFIDTPTKGVAGITEAERAEFKTLGDNITPMKRNGTADEVARAVLFLAFEATFTTGAKLAVDGG 246 (255)
T ss_dssp HHHTGGGTCEEEEEEECSBCCSSTTCTTSCHHHHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHHTCTTCCSCEEEESTT
T ss_pred HHHHhhhCcEEEEEecCcccCcccccccCChhhHHHHHHHHhccCCCCCCcCHHHHHHHHHHHcCcCcCccCCEEEECCC
Confidence 223345699999999999653321110000 0011222446689999999999987522 46899999987
Q ss_pred C
Q 021928 286 E 286 (305)
Q Consensus 286 ~ 286 (305)
.
T Consensus 247 ~ 247 (255)
T 4eso_A 247 L 247 (255)
T ss_dssp T
T ss_pred c
Confidence 5
|
| >1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.72 E-value=3.7e-17 Score=145.86 Aligned_cols=189 Identities=14% Similarity=0.096 Sum_probs=127.6
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh------cCCCcEEeecCCCCHHHHHHHhc-------Cc
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GV 163 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~~~v~~v~~D~~d~~~~~~~~~-------~~ 163 (305)
.+|+++||||+|+||++++++|+++|++|+++.|++++..+. .+.++.++.+|++|.+++.++++ ++
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i 85 (262)
T 1zem_A 6 NGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGKI 85 (262)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence 458999999999999999999999999999999987653221 13468899999999988876665 78
Q ss_pred cEEEECCcch---------------------------Hh----hhhhhcCCCEEEEEcccccccCCCCcccccchHH--H
Q 021928 164 RSIICPSEGF---------------------------IS----NAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA--R 210 (305)
Q Consensus 164 d~Vi~~~~g~---------------------------~~----~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~--~ 210 (305)
|++||+++.. +. ...++.+..+||++||..++.+......|..++. .
T Consensus 86 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~ 165 (262)
T 1zem_A 86 DFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSKGAII 165 (262)
T ss_dssp CEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCTTBHHHHHHHHHHH
T ss_pred CEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCCCchHHHHHHHHH
Confidence 9999874310 01 1123346789999999887766555555554332 1
Q ss_pred HHHHHHHHHHHhCCCCEEEEecCCcccCCCC---------------C--cc-e--eeecCCCCCCccCHHHHHHHHHHHh
Q 021928 211 KLAEQDESMLMASGIPYTIIRTGVLQNTPGG---------------K--QG-F--QFEEGCAANGSLSKEDAAFICVEAL 270 (305)
Q Consensus 211 ~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~---------------~--~~-~--~~~~~~~~~~~Is~~DvA~~iv~~l 270 (305)
.+.+.....+...+++++.|+||++...... . .. . .+........+.+++|+|++++.++
T Consensus 166 ~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~ 245 (262)
T 1zem_A 166 ALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGDINEIPGVVAFLL 245 (262)
T ss_dssp HHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTSTTSSCBCGGGSHHHHHHHH
T ss_pred HHHHHHHHHHHhhCeEEEEEecCCcCcchhhhhccchhhhccccccccCHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHc
Confidence 1222233345567999999999986432110 0 00 0 0001112234678899999999999
Q ss_pred hCCC--CCCcEEEEecC
Q 021928 271 ESIP--QTGLIFEVVNG 285 (305)
Q Consensus 271 ~~~~--~~~~~~~v~~g 285 (305)
.... ..|+.+.+.+|
T Consensus 246 s~~~~~itG~~i~vdGG 262 (262)
T 1zem_A 246 GDDSSFMTGVNLPIAGG 262 (262)
T ss_dssp SGGGTTCCSCEEEESCC
T ss_pred CchhcCcCCcEEecCCC
Confidence 7543 36888888764
|
| >1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.72 E-value=8e-17 Score=144.41 Aligned_cols=173 Identities=12% Similarity=0.116 Sum_probs=118.2
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh------cCCCcEEeecCCCCHHHHHHHhc-------C
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------G 162 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~~~v~~v~~D~~d~~~~~~~~~-------~ 162 (305)
..+++|+||||+|+||++++++|+++|++|++++|+++...+. .+.++.++.+|++|.+++.++++ +
T Consensus 29 l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 108 (272)
T 1yb1_A 29 VTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGD 108 (272)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCC
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHHCCC
Confidence 3468999999999999999999999999999999987653321 24568999999999988877765 7
Q ss_pred ccEEEECCcc----h--------------------------HhhhhhhcCCCEEEEEcccccccCCCCcccccchHHH--
Q 021928 163 VRSIICPSEG----F--------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR-- 210 (305)
Q Consensus 163 ~d~Vi~~~~g----~--------------------------~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~-- 210 (305)
+|+||++++. . +...+++.+.++||++||..++.+......|...+..
T Consensus 109 iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~ 188 (272)
T 1yb1_A 109 VSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYCSSKFAAV 188 (272)
T ss_dssp CSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCHHHHHHHHHHHHHHH
T ss_pred CcEEEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCCCCchhHHHHHHHHH
Confidence 8999988431 0 1112334677899999999887654444444433221
Q ss_pred HHHHHHHHHHH---hCCCCEEEEecCCcccCCCCCcceeeecCCCCCCccCHHHHHHHHHHHhhCCC
Q 021928 211 KLAEQDESMLM---ASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIP 274 (305)
Q Consensus 211 ~~~~~aE~~l~---~~gi~~tilRPg~l~~~~~~~~~~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~ 274 (305)
.+.+.....+. ..++++++|+||++......... .....+++++|+|++++.++.++.
T Consensus 189 ~l~~~la~e~~~~~~~gi~v~~v~Pg~v~t~~~~~~~------~~~~~~~~~~dva~~i~~~~~~~~ 249 (272)
T 1yb1_A 189 GFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKNPS------TSLGPTLEPEEVVNRLMHGILTEQ 249 (272)
T ss_dssp HHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTCTH------HHHCCCCCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHhCCCCeEEEEEeCCcccCCcccccc------ccccCCCCHHHHHHHHHHHHHcCC
Confidence 11111112222 35899999999986443221110 112357899999999999998654
|
| >4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A* | Back alignment and structure |
|---|
Probab=99.72 E-value=1.6e-16 Score=141.92 Aligned_cols=191 Identities=16% Similarity=0.119 Sum_probs=129.4
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEE-cCcchhhh------hcCCCcEEeecCCCCHHHHHHHhc-------
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALV-KDKRNAME------SFGTYVESMAGDASNKKFLKTALR------- 161 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~-R~~~~~~~------~~~~~v~~v~~D~~d~~~~~~~~~------- 161 (305)
.++++|+||||+|+||++++++|+++|++|+++. |+.+...+ ..+.++.++.+|++|.+++.++++
T Consensus 24 l~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 103 (267)
T 4iiu_A 24 AMSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHEIAQHG 103 (267)
T ss_dssp -CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhC
Confidence 4568999999999999999999999999997765 44433221 124578999999999988887775
Q ss_pred CccEEEECCcc----h----------------------Hhhhh-----hhcCCCEEEEEcccccccCCCCcccccchHHH
Q 021928 162 GVRSIICPSEG----F----------------------ISNAG-----SLKGVQHVILLSQLSVYRGSGGIQALMKGNAR 210 (305)
Q Consensus 162 ~~d~Vi~~~~g----~----------------------~~~~a-----~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~ 210 (305)
.+|++|++++. . +...+ ++.+..+||++||..++.+..+...|..++..
T Consensus 104 ~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa 183 (267)
T 4iiu_A 104 AWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSSVSGVMGNRGQVNYSAAKAG 183 (267)
T ss_dssp CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCHHHHHCCTTCHHHHHHHHH
T ss_pred CccEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcchHhccCCCCCchhHHHHHH
Confidence 78999988431 0 11111 24566799999998887766665566544321
Q ss_pred --HHHHHHHHHHHhCCCCEEEEecCCcccCCCCCccee---eecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEEEEe
Q 021928 211 --KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQ---FEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVV 283 (305)
Q Consensus 211 --~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~~~~~---~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~v~ 283 (305)
.+.+.....+...+++++.++||++........... .........+.+++|+|++++.++.+.. ..|+++++.
T Consensus 184 ~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~p~~~~~~~edva~~~~~L~s~~~~~itG~~i~vd 263 (267)
T 4iiu_A 184 IIGATKALAIELAKRKITVNCIAPGLIDTGMIEMEESALKEAMSMIPMKRMGQAEEVAGLASYLMSDIAGYVTRQVISIN 263 (267)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCCCHHHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred HHHHHHHHHHHHhhcCeEEEEEEEeeecCCcccccHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCCcccCccCCEEEeC
Confidence 122222233456799999999999654332111000 0111223456789999999999997543 468999998
Q ss_pred cCC
Q 021928 284 NGE 286 (305)
Q Consensus 284 ~g~ 286 (305)
+|-
T Consensus 264 GG~ 266 (267)
T 4iiu_A 264 GGM 266 (267)
T ss_dssp TTC
T ss_pred CCc
Confidence 773
|
| >3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=99.72 E-value=2e-16 Score=143.63 Aligned_cols=191 Identities=19% Similarity=0.214 Sum_probs=128.2
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcch--h------hhhcCCCcEEeecCCCCHHHHHHHhc------
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN--A------MESFGTYVESMAGDASNKKFLKTALR------ 161 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~--~------~~~~~~~v~~v~~D~~d~~~~~~~~~------ 161 (305)
..+|++|||||+|+||++++++|+++|++|+++.|+.+. . .+..+.++.++.+|++|.++++++++
T Consensus 47 l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 126 (294)
T 3r3s_A 47 LKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAREAL 126 (294)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 356899999999999999999999999999999887332 1 11234578999999999888877664
Q ss_pred -CccEEEECCcc-----h----------------------Hhhhhhhc--CCCEEEEEcccccccCCCCcccccchHHH-
Q 021928 162 -GVRSIICPSEG-----F----------------------ISNAGSLK--GVQHVILLSQLSVYRGSGGIQALMKGNAR- 210 (305)
Q Consensus 162 -~~d~Vi~~~~g-----~----------------------~~~~a~~~--gv~~~V~iSS~~~~~~~~~~~~~~~~~~~- 210 (305)
++|++|++++. . +..++... +-.+||++||..++.+......|..++..
T Consensus 127 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~ 206 (294)
T 3r3s_A 127 GGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSIQAYQPSPHLLDYAATKAAI 206 (294)
T ss_dssp TCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCGGGTSCCTTCHHHHHHHHHH
T ss_pred CCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECChhhccCCCCchHHHHHHHHH
Confidence 78999988431 0 11112111 12599999999988776666566544321
Q ss_pred -HHHHHHHHHHHhCCCCEEEEecCCcccCC----CCCcce--eeecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEEE
Q 021928 211 -KLAEQDESMLMASGIPYTIIRTGVLQNTP----GGKQGF--QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFE 281 (305)
Q Consensus 211 -~~~~~aE~~l~~~gi~~tilRPg~l~~~~----~~~~~~--~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~ 281 (305)
.+.+.....+...+++++.|+||++.... ...... .+........+.+++|+|++++.++.... ..|++++
T Consensus 207 ~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~ 286 (294)
T 3r3s_A 207 LNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPMKRAGQPAELAPVYVYLASQESSYVTAEVHG 286 (294)
T ss_dssp HHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHTTTSCGGGSTTTTTTSTTSSCBCGGGGHHHHHHHHSGGGTTCCSCEEE
T ss_pred HHHHHHHHHHHhhcCeEEEEEecCcCccccccccCCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCCCCEEE
Confidence 11222223345579999999999964321 111100 01111223456788999999999996543 4689999
Q ss_pred EecCC
Q 021928 282 VVNGE 286 (305)
Q Consensus 282 v~~g~ 286 (305)
|.+|.
T Consensus 287 vdGG~ 291 (294)
T 3r3s_A 287 VCGGE 291 (294)
T ss_dssp ESTTC
T ss_pred ECCCc
Confidence 99874
|
| >3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.72 E-value=1.1e-16 Score=140.82 Aligned_cols=171 Identities=13% Similarity=0.139 Sum_probs=116.0
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh---hcCCCcEEeecCCCCHHHHHHHhc-------CccEEE
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALR-------GVRSII 167 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~---~~~~~v~~v~~D~~d~~~~~~~~~-------~~d~Vi 167 (305)
+|+++||||+|+||++++++|+++|++|++++|+.++..+ ..+.++.++.+|++|.++++++++ .+|++|
T Consensus 3 ~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv 82 (235)
T 3l6e_A 3 LGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLGNAVIGIVADLAHHEDVDVAFAAAVEWGGLPELVL 82 (235)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTSHHHHHHHHHHHHHHHCSCSEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcCCCcEEE
Confidence 5899999999999999999999999999999999766432 223368999999999988877765 679999
Q ss_pred ECCcch--------------------------Hhhh----hhhcCCCEEEEEcccccccCCCCcccccchHHH--HHHHH
Q 021928 168 CPSEGF--------------------------ISNA----GSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--KLAEQ 215 (305)
Q Consensus 168 ~~~~g~--------------------------~~~~----a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~--~~~~~ 215 (305)
++++.. +..+ .++.+ .+||++||..++.+......|..++.. .+.+.
T Consensus 83 nnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~ 161 (235)
T 3l6e_A 83 HCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERG-GVLANVLSSAAQVGKANESLYCASKWGMRGFLES 161 (235)
T ss_dssp EECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC-EEEEEECCEECCSSCSSHHHHHHHHHHHHHHHHH
T ss_pred ECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEEeCHHhcCCCCCCcHHHHHHHHHHHHHHH
Confidence 874310 0111 22223 399999999887766655556544321 11122
Q ss_pred HHHHHHhCCCCEEEEecCCcccCCCCCcceeeecCCCCCCccCHHHHHHHHHHHhhCCC
Q 021928 216 DESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIP 274 (305)
Q Consensus 216 aE~~l~~~gi~~tilRPg~l~~~~~~~~~~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~ 274 (305)
....+...++.++.|+||++........ .......+++++|+|+.++.++.++.
T Consensus 162 la~e~~~~gi~v~~v~PG~v~T~~~~~~-----~~~~~~~~~~pedvA~~v~~l~~~~~ 215 (235)
T 3l6e_A 162 LRAELKDSPLRLVNLYPSGIRSEFWDNT-----DHVDPSGFMTPEDAAAYMLDALEARS 215 (235)
T ss_dssp HHHHTTTSSEEEEEEEEEEECCCC----------------CBCHHHHHHHHHHHTCCCS
T ss_pred HHHHhhccCCEEEEEeCCCccCcchhcc-----CCCCCcCCCCHHHHHHHHHHHHhCCC
Confidence 2222345789999999999654322111 00122367899999999999997654
|
| >3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* | Back alignment and structure |
|---|
Probab=99.71 E-value=1.5e-16 Score=144.33 Aligned_cols=191 Identities=18% Similarity=0.186 Sum_probs=130.0
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhh-------hhcCCCcEEeecCCCCHHHHHHHhc-------
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM-------ESFGTYVESMAGDASNKKFLKTALR------- 161 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~-------~~~~~~v~~v~~D~~d~~~~~~~~~------- 161 (305)
..+|+||||||+|+||++++++|+++|++|+++.|+.+... +..+.++.++.+|++|.++++++++
T Consensus 45 l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 124 (291)
T 3ijr_A 45 LKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQLG 124 (291)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 35699999999999999999999999999999999875421 1234578999999999988887765
Q ss_pred CccEEEECCcc-----h----------------------Hhhhhhh--cCCCEEEEEcccccccCCCCcccccchHHH--
Q 021928 162 GVRSIICPSEG-----F----------------------ISNAGSL--KGVQHVILLSQLSVYRGSGGIQALMKGNAR-- 210 (305)
Q Consensus 162 ~~d~Vi~~~~g-----~----------------------~~~~a~~--~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~-- 210 (305)
.+|++||+++. . +..++.. ....+||++||..++.+......|..++..
T Consensus 125 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~ 204 (291)
T 3ijr_A 125 SLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTASIVAYEGNETLIDYSATKGAIV 204 (291)
T ss_dssp SCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECCTHHHHCCTTCHHHHHHHHHHH
T ss_pred CCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEechHhcCCCCCChhHHHHHHHHH
Confidence 68999988331 0 1111111 123589999999888776666566544321
Q ss_pred HHHHHHHHHHHhCCCCEEEEecCCcccCCC----CCc-ceeeecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEEEEe
Q 021928 211 KLAEQDESMLMASGIPYTIIRTGVLQNTPG----GKQ-GFQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVV 283 (305)
Q Consensus 211 ~~~~~aE~~l~~~gi~~tilRPg~l~~~~~----~~~-~~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~v~ 283 (305)
.+.+.....+...+++++.|+||++..... ... ...+........+.+++|+|++++.++.... ..|+++++.
T Consensus 205 ~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vd 284 (291)
T 3ijr_A 205 AFTRSLSQSLVQKGIRVNGVAPGPIWTPLIPSSFDEKKVSQFGSNVPMQRPGQPYELAPAYVYLASSDSSYVTGQMIHVN 284 (291)
T ss_dssp HHHHHHHHHHGGGTCEEEEEEECSBCSTHHHHHSCHHHHHHTTTTSTTSSCBCGGGTHHHHHHHHSGGGTTCCSCEEEES
T ss_pred HHHHHHHHHHhhcCEEEEEEeeCCCcCCcccccCCHHHHHHHHccCCCCCCcCHHHHHHHHHHHhCCccCCCcCCEEEEC
Confidence 112222233445799999999999653311 000 0001112233456789999999999997543 468999998
Q ss_pred cCC
Q 021928 284 NGE 286 (305)
Q Consensus 284 ~g~ 286 (305)
+|.
T Consensus 285 GG~ 287 (291)
T 3ijr_A 285 GGV 287 (291)
T ss_dssp SSC
T ss_pred CCc
Confidence 775
|
| >3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=99.71 E-value=1.7e-16 Score=138.56 Aligned_cols=172 Identities=12% Similarity=0.109 Sum_probs=114.6
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh---hcCCCcEEeecCCCCHHHHHHHhcCc----cEEEECC
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALRGV----RSIICPS 170 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~---~~~~~v~~v~~D~~d~~~~~~~~~~~----d~Vi~~~ 170 (305)
||+||||||+|+||++++++|+++|++|++++|++++..+ ..+.++.++.+|++|.++++++++.+ |++|+++
T Consensus 1 Mk~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~d~lv~~A 80 (230)
T 3guy_A 1 MSLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLSNNVGYRARDLASHQEVEQLFEQLDSIPSTVVHSA 80 (230)
T ss_dssp --CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTCSSCCCEEECCTTCHHHHHHHHHSCSSCCSEEEECC
T ss_pred CCEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhccCeEeecCCCHHHHHHHHHHHhhcCCEEEEeC
Confidence 4789999999999999999999999999999999876433 23457899999999999999988765 8999884
Q ss_pred cc----h----------------------Hhh----hhhhcCCCEEEEEcccccccCCCCcccccchHHH--HHHHHHHH
Q 021928 171 EG----F----------------------ISN----AGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--KLAEQDES 218 (305)
Q Consensus 171 ~g----~----------------------~~~----~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~--~~~~~aE~ 218 (305)
+. . +.. ..++.+. +||++||..++.+......|..++.. .+.+....
T Consensus 81 g~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~-~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~ 159 (230)
T 3guy_A 81 GSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQPV-NVVMIMSTAAQQPKAQESTYCAVKWAVKGLIESVRL 159 (230)
T ss_dssp CCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCC-EEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHH
T ss_pred CcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-eEEEEeecccCCCCCCCchhHHHHHHHHHHHHHHHH
Confidence 31 0 011 1222333 99999999888776666566543321 11111222
Q ss_pred HHHhCCCCEEEEecCCcccCCCCCcceeeecCCCCCCccCHHHHHHHHHHHhhCCC
Q 021928 219 MLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIP 274 (305)
Q Consensus 219 ~l~~~gi~~tilRPg~l~~~~~~~~~~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~ 274 (305)
.+...++.++.++||++......... .......+++++|+|++++.++..+.
T Consensus 160 e~~~~gi~v~~v~PG~v~t~~~~~~~----~~~~~~~~~~~~dvA~~i~~l~~~~~ 211 (230)
T 3guy_A 160 ELKGKPMKIIAVYPGGMATEFWETSG----KSLDTSSFMSAEDAALMIHGALANIG 211 (230)
T ss_dssp HTTTSSCEEEEEEECCC--------------------CCCHHHHHHHHHHHCCEET
T ss_pred HHHhcCeEEEEEECCcccChHHHhcC----CCCCcccCCCHHHHHHHHHHHHhCcC
Confidence 23446899999999996543221110 11123467899999999999997554
|
| >3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.71 E-value=2.7e-16 Score=141.30 Aligned_cols=186 Identities=11% Similarity=0.077 Sum_probs=123.2
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhh-------------hhcCCCcEEeecCCCCHHHHHHHhc
Q 021928 95 PEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM-------------ESFGTYVESMAGDASNKKFLKTALR 161 (305)
Q Consensus 95 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~-------------~~~~~~v~~v~~D~~d~~~~~~~~~ 161 (305)
+..+|+++||||+|+||++++++|+++|++|++++|+.++.. ...+.++.++.+|++|.+++.++++
T Consensus 3 ~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~ 82 (274)
T 3e03_A 3 TLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAVA 82 (274)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHHH
T ss_pred CCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHH
Confidence 345699999999999999999999999999999999875311 1124578899999999988877665
Q ss_pred -------CccEEEECCcc-----h-------------------------HhhhhhhcCCCEEEEEcccccccC--CCCcc
Q 021928 162 -------GVRSIICPSEG-----F-------------------------ISNAGSLKGVQHVILLSQLSVYRG--SGGIQ 202 (305)
Q Consensus 162 -------~~d~Vi~~~~g-----~-------------------------~~~~a~~~gv~~~V~iSS~~~~~~--~~~~~ 202 (305)
.+|++|++++. . ....+++.+..+||++||...+.+ .....
T Consensus 83 ~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~ 162 (274)
T 3e03_A 83 ATVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPAWWGAHT 162 (274)
T ss_dssp HHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSSCEEEECCCCCCCCHHHHHHCH
T ss_pred HHHHHcCCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCCceEEEECChHhcCCCCCCCCc
Confidence 68999988431 0 111134456679999999877654 22333
Q ss_pred cccchHH--HHHHHHHHHHHHhCCCCEEEEecCCcccCCCCCcceeeecCCCCCCccCHHHHHHHHHHHhhCCC--CCCc
Q 021928 203 ALMKGNA--RKLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIP--QTGL 278 (305)
Q Consensus 203 ~~~~~~~--~~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~~~~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~ 278 (305)
.|..++. ..+.+.....+...++.++.|+||++.+.+-... . .........+++|+|++++.++.... ..|+
T Consensus 163 ~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~v~T~~~~~---~-~~~~~~~~~~pedvA~~v~~l~s~~~~~itG~ 238 (274)
T 3e03_A 163 GYTLAKMGMSLVTLGLAAEFGPQGVAINALWPRTVIATDAINM---L-PGVDAAACRRPEIMADAAHAVLTREAAGFHGQ 238 (274)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECSBCBCC-----------CCCGGGSBCTHHHHHHHHHHHTSCCTTCCSC
T ss_pred hHHHHHHHHHHHHHHHHHHhhhcCEEEEEEECCcccccchhhh---c-ccccccccCCHHHHHHHHHHHhCccccccCCe
Confidence 3443332 1122222333456799999999996433221110 0 11122346789999999999997654 3577
Q ss_pred EEEEecC
Q 021928 279 IFEVVNG 285 (305)
Q Consensus 279 ~~~v~~g 285 (305)
.+ +.+|
T Consensus 239 ~i-~~~g 244 (274)
T 3e03_A 239 FL-IDDE 244 (274)
T ss_dssp EE-EHHH
T ss_pred EE-EcCc
Confidence 77 4433
|
| >4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1} | Back alignment and structure |
|---|
Probab=99.71 E-value=4.8e-16 Score=137.32 Aligned_cols=189 Identities=15% Similarity=0.116 Sum_probs=134.1
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhc---CccEEEECCcc-
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR---GVRSIICPSEG- 172 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~---~~d~Vi~~~~g- 172 (305)
.+|+++||||+++||++++++|++.|++|+++.|+++...+....++..+.+|++|.++++++++ .+|++|++++-
T Consensus 10 ~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~g~iDiLVNNAGi~ 89 (242)
T 4b79_A 10 AGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHAPRHPRIRREELDITDSQRLQRLFEALPRLDVLVNNAGIS 89 (242)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTSCCCTTEEEEECCTTCHHHHHHHHHHCSCCSEEEECCCCC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhhhhcCCeEEEEecCCCHHHHHHHHHhcCCCCEEEECCCCC
Confidence 46999999999999999999999999999999999887666666789999999999988877665 67999987441
Q ss_pred --h-------------------------HhhhhhhcCCCEEEEEcccccccCCCCcccccchHH--HHHHHHHHHHHHhC
Q 021928 173 --F-------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA--RKLAEQDESMLMAS 223 (305)
Q Consensus 173 --~-------------------------~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~--~~~~~~aE~~l~~~ 223 (305)
. .....++.+ .+||.+||..+..+.+....|..++. ..+.+.....+...
T Consensus 90 ~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~-G~IVnisS~~~~~~~~~~~~Y~asKaav~~ltr~lA~Ela~~ 168 (242)
T 4b79_A 90 RDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRG-GSILNIASMYSTFGSADRPAYSASKGAIVQLTRSLACEYAAE 168 (242)
T ss_dssp CGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHC-EEEEEECCGGGTSCCSSCHHHHHHHHHHHHHHHHHHHHHGGG
T ss_pred CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CeEEEEeeccccCCCCCCHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 0 111123333 69999999988877666666655442 22233334456678
Q ss_pred CCCEEEEecCCcccCCCCC---c-ce--eeecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEEEEecCC
Q 021928 224 GIPYTIIRTGVLQNTPGGK---Q-GF--QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVNGE 286 (305)
Q Consensus 224 gi~~tilRPg~l~~~~~~~---~-~~--~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~v~~g~ 286 (305)
+|++..|.||++....... . .. .+....+..-+-.++|+|.+++.++.+.. -.|+++.|.+|-
T Consensus 169 gIrVNaV~PG~i~T~m~~~~~~~~~~~~~~~~~~PlgR~g~peeiA~~v~fLaSd~a~~iTG~~l~VDGG~ 239 (242)
T 4b79_A 169 RIRVNAIAPGWIDTPLGAGLKADVEATRRIMQRTPLARWGEAPEVASAAAFLCGPGASFVTGAVLAVDGGY 239 (242)
T ss_dssp TEEEEEEEECSBCCC-----CCCHHHHHHHHHTCTTCSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred CeEEEEEEeCCCCChhhhcccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCccCceEEECccH
Confidence 9999999999964332110 0 00 00011122345688999999999996543 468999998774
|
| >3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* | Back alignment and structure |
|---|
Probab=99.71 E-value=2.1e-16 Score=141.24 Aligned_cols=191 Identities=12% Similarity=0.090 Sum_probs=130.0
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh-------cCC-CcEEeecCCCCHHHHHHHhc------
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------FGT-YVESMAGDASNKKFLKTALR------ 161 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~-------~~~-~v~~v~~D~~d~~~~~~~~~------ 161 (305)
..+++++||||+|+||++++++|+++|++|++++|++++..+. .+. ++.++.+|++|.+++.++++
T Consensus 6 l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 85 (265)
T 3lf2_A 6 LSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACERTL 85 (265)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHHHc
Confidence 3569999999999999999999999999999999997653221 223 48899999999888877664
Q ss_pred -CccEEEECCcc----h----------------------Hh----hhhhhcCCCEEEEEcccccccCCCCcccccchHH-
Q 021928 162 -GVRSIICPSEG----F----------------------IS----NAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA- 209 (305)
Q Consensus 162 -~~d~Vi~~~~g----~----------------------~~----~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~- 209 (305)
.+|++|++++. . +. ...++.+..+||++||..++.+......|..++.
T Consensus 86 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa 165 (265)
T 3lf2_A 86 GCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLASQPEPHMVATSAARAG 165 (265)
T ss_dssp CSCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEEGGGTSCCTTBHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEECCcccCCCCCCchhhHHHHHH
Confidence 67999988431 0 11 1123455679999999988877666666654432
Q ss_pred -HHHHHHHHHHHHhCCCCEEEEecCCcccCCC-----C-C-ccee---e----ec--CCCCCCccCHHHHHHHHHHHhhC
Q 021928 210 -RKLAEQDESMLMASGIPYTIIRTGVLQNTPG-----G-K-QGFQ---F----EE--GCAANGSLSKEDAAFICVEALES 272 (305)
Q Consensus 210 -~~~~~~aE~~l~~~gi~~tilRPg~l~~~~~-----~-~-~~~~---~----~~--~~~~~~~Is~~DvA~~iv~~l~~ 272 (305)
..+.+.....+...++++..|+||++..... . . .... + .. ......+.+++|+|++++.++.+
T Consensus 166 ~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~fL~s~ 245 (265)
T 3lf2_A 166 VKNLVRSMAFEFAPKGVRVNGILIGLVESGQWRRRFEAREERELDWAQWTAQLARNKQIPLGRLGKPIEAARAILFLASP 245 (265)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTC------CHHHHHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSG
T ss_pred HHHHHHHHHHHhcccCeEEEEEEeCcCcCchhhhhhhhhhhhccCHHHHHHHHhhccCCCcCCCcCHHHHHHHHHHHhCc
Confidence 1122222233456799999999998643210 0 0 0000 0 00 02234567899999999999975
Q ss_pred CC--CCCcEEEEecCC
Q 021928 273 IP--QTGLIFEVVNGE 286 (305)
Q Consensus 273 ~~--~~~~~~~v~~g~ 286 (305)
.. ..|+++++.+|.
T Consensus 246 ~~~~itG~~i~vdGG~ 261 (265)
T 3lf2_A 246 LSAYTTGSHIDVSGGL 261 (265)
T ss_dssp GGTTCCSEEEEESSSC
T ss_pred hhcCcCCCEEEECCCC
Confidence 33 468999998775
|
| >3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} | Back alignment and structure |
|---|
Probab=99.71 E-value=5.1e-17 Score=145.58 Aligned_cols=187 Identities=14% Similarity=0.078 Sum_probs=127.8
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhc-------CccEEE
Q 021928 95 PEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR-------GVRSII 167 (305)
Q Consensus 95 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~-------~~d~Vi 167 (305)
+..+|+|+||||+|+||++++++|+++|++|+++.|+.+...+ ...+.+|++|.+++.++++ ++|++|
T Consensus 25 ~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~-----~~~~~~Dv~~~~~~~~~~~~~~~~~g~iD~lv 99 (266)
T 3uxy_A 25 GFEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIAA-----DLHLPGDLREAAYADGLPGAVAAGLGRLDIVV 99 (266)
T ss_dssp -CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSCC-----SEECCCCTTSHHHHHHHHHHHHHHHSCCCEEE
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHh-----hhccCcCCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence 3456899999999999999999999999999999998755332 2456899999887766554 789999
Q ss_pred ECCcc----h----------------------Hhhh----hhhcCCCEEEEEcccccccCCCCcccccchHHH--HHHHH
Q 021928 168 CPSEG----F----------------------ISNA----GSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--KLAEQ 215 (305)
Q Consensus 168 ~~~~g----~----------------------~~~~----a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~--~~~~~ 215 (305)
++++. . +..+ .++.+..+||++||..++.+......|..++.. .+.+.
T Consensus 100 nnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~ 179 (266)
T 3uxy_A 100 NNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAGGGAIVNVASCWGLRPGPGHALYCLTKAALASLTQC 179 (266)
T ss_dssp ECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTBCCTTBHHHHHHHHHHHHHHHH
T ss_pred ECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCCCCChHHHHHHHHHHHHHHH
Confidence 88431 0 1111 245667899999999888776666566554321 11222
Q ss_pred HHHHHHhCCCCEEEEecCCcccCCC--------CCcc---eeeecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEEEE
Q 021928 216 DESMLMASGIPYTIIRTGVLQNTPG--------GKQG---FQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEV 282 (305)
Q Consensus 216 aE~~l~~~gi~~tilRPg~l~~~~~--------~~~~---~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~v 282 (305)
....+...++.++.|+||++..... .... ..+........+.+++|+|++++.++.+.. ..|+++++
T Consensus 180 la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~v 259 (266)
T 3uxy_A 180 MGMDHAPQGIRINAVCPNEVNTPMLRTGFAKRGFDPDRAVAELGRTVPLGRIAEPEDIADVVLFLASDAARYLCGSLVEV 259 (266)
T ss_dssp HHHHHGGGTEEEEEEEESSBCCHHHHHHHHHTTCCHHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEE
T ss_pred HHHHhhhcCcEEEEEeeCCCcchHhhhhhhcccccchHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCCcCCEEEE
Confidence 2233445799999999999643210 0000 001122233456799999999999997654 46899999
Q ss_pred ecCC
Q 021928 283 VNGE 286 (305)
Q Consensus 283 ~~g~ 286 (305)
.+|.
T Consensus 260 dGG~ 263 (266)
T 3uxy_A 260 NGGK 263 (266)
T ss_dssp STTC
T ss_pred CcCE
Confidence 8875
|
| >2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.71 E-value=1.1e-16 Score=143.06 Aligned_cols=189 Identities=16% Similarity=0.163 Sum_probs=126.8
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh---hcCCCcEEeecCCCCHHHHHHHhc-------CccEE
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALR-------GVRSI 166 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~---~~~~~v~~v~~D~~d~~~~~~~~~-------~~d~V 166 (305)
.+|+++||||+|+||++++++|+++|++|++++|++++..+ .+..++.++.+|++|.+++.++++ .+|++
T Consensus 5 ~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~l 84 (263)
T 2a4k_A 5 SGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLHGV 84 (263)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHHcCCCcEE
Confidence 45899999999999999999999999999999999766433 233468899999999988887765 46999
Q ss_pred EECCcch--------------------------Hhhhhhhc--CCCEEEEEcccccccCCCCcccccchH--HHHHHHHH
Q 021928 167 ICPSEGF--------------------------ISNAGSLK--GVQHVILLSQLSVYRGSGGIQALMKGN--ARKLAEQD 216 (305)
Q Consensus 167 i~~~~g~--------------------------~~~~a~~~--gv~~~V~iSS~~~~~~~~~~~~~~~~~--~~~~~~~a 216 (305)
|++++.. +..++... ...+||++||..++ +......|..++ ...+.+..
T Consensus 85 vnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~-~~~~~~~Y~asK~a~~~~~~~l 163 (263)
T 2a4k_A 85 AHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGL-GAFGLAHYAAGKLGVVGLARTL 163 (263)
T ss_dssp EEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTC-CHHHHHHHHHCSSHHHHHHHHH
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEecchhc-CCCCcHHHHHHHHHHHHHHHHH
Confidence 9884310 11111111 14699999999887 433333343322 22222333
Q ss_pred HHHHHhCCCCEEEEecCCcccCCCCC-cc-e--eeecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEEEEecCC
Q 021928 217 ESMLMASGIPYTIIRTGVLQNTPGGK-QG-F--QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVNGE 286 (305)
Q Consensus 217 E~~l~~~gi~~tilRPg~l~~~~~~~-~~-~--~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~v~~g~ 286 (305)
...+...++++++|+||++....... .. . .+........+.+++|+|++++.++.++. ..|+.+.+.+|.
T Consensus 164 a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdgG~ 239 (263)
T 2a4k_A 164 ALELARKGVRVNVLLPGLIQTPMTAGLPPWAWEQEVGASPLGRAGRPEEVAQAALFLLSEESAYITGQALYVDGGR 239 (263)
T ss_dssp HHHHTTTTCEEEEEEECSBCCGGGTTSCHHHHHHHHHTSTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred HHHhhhhCcEEEEEEeCcCcCchhhhcCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCcCCEEEECCCc
Confidence 33455679999999999964332111 00 0 00011122356899999999999997543 468999998875
|
| >3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.71 E-value=9.1e-17 Score=142.54 Aligned_cols=186 Identities=13% Similarity=0.104 Sum_probs=121.0
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhc--------C-CCcEEeecCCCCHHHHHHHhc-----
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF--------G-TYVESMAGDASNKKFLKTALR----- 161 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~--------~-~~v~~v~~D~~d~~~~~~~~~----- 161 (305)
..++++|||||+|+||++++++|+++|++|++++|++++..+.. . .++.++.+|++|.+++.++++
T Consensus 5 ~~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 84 (250)
T 3nyw_A 5 KQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQK 84 (250)
T ss_dssp CCCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHHh
Confidence 34689999999999999999999999999999999976633211 2 568899999999988877665
Q ss_pred --CccEEEECCcc----h---------------------Hh----hhhhhcCCCEEEEEcccccccCCCCcccccchHH-
Q 021928 162 --GVRSIICPSEG----F---------------------IS----NAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA- 209 (305)
Q Consensus 162 --~~d~Vi~~~~g----~---------------------~~----~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~- 209 (305)
.+|++|++++- . +. ...++.+..+||++||..+..+......|..++.
T Consensus 85 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa 164 (250)
T 3nyw_A 85 YGAVDILVNAAAMFMDGSLSEPVDNFRKIMEINVIAQYGILKTVTEIMKVQKNGYIFNVASRAAKYGFADGGIYGSTKFA 164 (250)
T ss_dssp HCCEEEEEECCCCCCCCCCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC-------CCTTHHHHHHHH
T ss_pred cCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEccHHhcCCCCCCcchHHHHHH
Confidence 68999988431 0 11 1124456789999999887764444445544332
Q ss_pred -HHHHHHHHHHHHhCCCCEEEEecCCcccCCCCCcceeeecCCCCCCccCHHHHHHHHHHHhhCCCC---CCcEEEEecC
Q 021928 210 -RKLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQ---TGLIFEVVNG 285 (305)
Q Consensus 210 -~~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~~~~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~~---~~~~~~v~~g 285 (305)
..+.+.....+...+++++.|+||++........ ........+++++|+|++++.++..+.. .+..+.|.++
T Consensus 165 ~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~----~~~~~~~~~~~p~dva~~v~~l~s~~~~~~~~~~~i~vd~~ 240 (250)
T 3nyw_A 165 LLGLAESLYRELAPLGIRVTTLCPGWVNTDMAKKA----GTPFKDEEMIQPDDLLNTIRCLLNLSENVCIKDIVFEMKKS 240 (250)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHT----TCCSCGGGSBCHHHHHHHHHHHHTSCTTEECCEEEEEEHHH
T ss_pred HHHHHHHHHHHhhhcCcEEEEEecCcccCchhhhc----CCCcccccCCCHHHHHHHHHHHHcCCCceEeeEEEEEeecc
Confidence 1112222233455799999999999643211000 0111224578999999999999987653 3445555543
|
| >3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A* | Back alignment and structure |
|---|
Probab=99.71 E-value=4.6e-16 Score=140.33 Aligned_cols=189 Identities=13% Similarity=0.031 Sum_probs=128.8
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCc----------------chhhh------hcCCCcEEeecCCCCHH
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK----------------RNAME------SFGTYVESMAGDASNKK 154 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~----------------~~~~~------~~~~~v~~v~~D~~d~~ 154 (305)
.+|+++||||+++||++++++|+++|++|++++|+. +...+ ..+.++.++.+|++|.+
T Consensus 10 ~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~ 89 (286)
T 3uve_A 10 EGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVRDYD 89 (286)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHH
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCCCHH
Confidence 469999999999999999999999999999999872 22111 12457899999999998
Q ss_pred HHHHHhc-------CccEEEECCcc------h---------------------Hhh----hhhhcC-CCEEEEEcccccc
Q 021928 155 FLKTALR-------GVRSIICPSEG------F---------------------ISN----AGSLKG-VQHVILLSQLSVY 195 (305)
Q Consensus 155 ~~~~~~~-------~~d~Vi~~~~g------~---------------------~~~----~a~~~g-v~~~V~iSS~~~~ 195 (305)
+++++++ .+|++|++++. . +.. ...+.+ -.+||++||..++
T Consensus 90 ~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~ 169 (286)
T 3uve_A 90 ALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVGGL 169 (286)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGT
T ss_pred HHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCcEEEEECchhhc
Confidence 8887765 78999988431 0 011 122223 4699999999888
Q ss_pred cCCCCcccccchHH--HHHHHHHHHHHHhCCCCEEEEecCCcccCCCCCc------------ce--------eeecCCCC
Q 021928 196 RGSGGIQALMKGNA--RKLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQ------------GF--------QFEEGCAA 253 (305)
Q Consensus 196 ~~~~~~~~~~~~~~--~~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~~------------~~--------~~~~~~~~ 253 (305)
.+......|..++. ..+.+.....+...++.++.|+||++........ .. .. .....
T Consensus 170 ~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~p 248 (286)
T 3uve_A 170 KAYPHTGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGTFKMFRPDLENPGPDDMAPICQM-FHTLP 248 (286)
T ss_dssp SCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHHHT-TCSSS
T ss_pred cCCCCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCCcccccchhhhccccccccchhhHHHHHHh-hhccC
Confidence 77666656655432 1122222233456799999999999653322110 00 00 01111
Q ss_pred CCccCHHHHHHHHHHHhhCCC--CCCcEEEEecCC
Q 021928 254 NGSLSKEDAAFICVEALESIP--QTGLIFEVVNGE 286 (305)
Q Consensus 254 ~~~Is~~DvA~~iv~~l~~~~--~~~~~~~v~~g~ 286 (305)
..+.+++|+|++++.++.+.. ..|++++|.+|.
T Consensus 249 ~r~~~p~dvA~~v~fL~s~~a~~itG~~i~vdGG~ 283 (286)
T 3uve_A 249 IPWVEPIDISNAVLFFASDEARYITGVTLPIDAGS 283 (286)
T ss_dssp CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred CCcCCHHHHHHHHHHHcCccccCCcCCEEeECCcc
Confidence 456799999999999996543 468999999874
|
| >3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.71 E-value=1e-15 Score=141.05 Aligned_cols=188 Identities=15% Similarity=0.125 Sum_probs=119.7
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcch-----hh------hhcCCCcEEeecCCCCHHHHHHHhc----
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-----AM------ESFGTYVESMAGDASNKKFLKTALR---- 161 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~-----~~------~~~~~~v~~v~~D~~d~~~~~~~~~---- 161 (305)
.+|+|+||||+|+||++++++|+++|++|++.+|+... .. ...+.++.++.+|++|.+++.++++
T Consensus 4 ~~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~ 83 (324)
T 3u9l_A 4 SKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQIIG 83 (324)
T ss_dssp -CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Confidence 35899999999999999999999999999999987421 11 1124578999999999999888776
Q ss_pred ---CccEEEECCcc-----h---------------------Hhhh----hhhcCCCEEEEEcccccccC-CCCcccccch
Q 021928 162 ---GVRSIICPSEG-----F---------------------ISNA----GSLKGVQHVILLSQLSVYRG-SGGIQALMKG 207 (305)
Q Consensus 162 ---~~d~Vi~~~~g-----~---------------------~~~~----a~~~gv~~~V~iSS~~~~~~-~~~~~~~~~~ 207 (305)
++|++|++++- . +..+ +++.+.++||++||..+... .+....|..+
T Consensus 84 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~~g~iV~isS~~~~~~~~~~~~~Y~as 163 (324)
T 3u9l_A 84 EDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQKHGLLIWISSSSSAGGTPPYLAPYFAA 163 (324)
T ss_dssp HHSCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCCSSCHHHHHH
T ss_pred HcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEecchhccCCCCcchhHHHH
Confidence 78999988441 0 1112 25567889999999887643 3334445443
Q ss_pred HHH--HHHHHHHHHHHhCCCCEEEEecCCcccCCC----CCccee------eec-CC-------------CCCCccCHHH
Q 021928 208 NAR--KLAEQDESMLMASGIPYTIIRTGVLQNTPG----GKQGFQ------FEE-GC-------------AANGSLSKED 261 (305)
Q Consensus 208 ~~~--~~~~~aE~~l~~~gi~~tilRPg~l~~~~~----~~~~~~------~~~-~~-------------~~~~~Is~~D 261 (305)
+.. .+.+.....+...|+++++|+||.+..... ...... +.. +. ......+++|
T Consensus 164 Kaa~~~~~~~la~el~~~gI~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~p~~ 243 (324)
T 3u9l_A 164 KAAMDAIAVQYARELSRWGIETSIIVPGAFTSGTNHFAHSGVPDDHARQAEYEAGPNAGLGEEIKKAFAAIVPPDADVSL 243 (324)
T ss_dssp HHHHHHHHHHHHHHHHTTTEEEEEEEECCC---------CBCCSCHHHHHHHHHTTTTTHHHHHHHHHHHTSCTTCCTHH
T ss_pred HHHHHHHHHHHHHHhhhhCcEEEEEECCccccCchhhcccCCchHHHHHHhhccccccCCHHHHHHHHHHhcCCCCCHHH
Confidence 321 111222223445799999999999642111 000000 000 00 0011257899
Q ss_pred HHHHHHHHhhCCCCC-CcEEEEec
Q 021928 262 AAFICVEALESIPQT-GLIFEVVN 284 (305)
Q Consensus 262 vA~~iv~~l~~~~~~-~~~~~v~~ 284 (305)
||.+++.+++.+... ...+.+..
T Consensus 244 vA~aiv~~~~~~~~~~~~~~~~gp 267 (324)
T 3u9l_A 244 VADAIVRVVGTASGKRPFRVHVDP 267 (324)
T ss_dssp HHHHHHHHHTSCTTCCCSEEEECT
T ss_pred HHHHHHHHhcCCCCCCCeEEEeCC
Confidence 999999999877532 34445543
|
| >2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.71 E-value=1.2e-16 Score=143.71 Aligned_cols=189 Identities=12% Similarity=0.092 Sum_probs=122.9
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh---cC--CCcEEeecCCCCHHHHHHHhcC-------ccEE
Q 021928 99 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FG--TYVESMAGDASNKKFLKTALRG-------VRSI 166 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~~--~~v~~v~~D~~d~~~~~~~~~~-------~d~V 166 (305)
|+++||||+|+||++++++|+++|++|++++|++++..+. +. .++.++.+|++|.+++.++++. +|++
T Consensus 22 k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l 101 (272)
T 2nwq_A 22 STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAKTRVLPLTLDVRDRAAMSAAVDNLPEEFATLRGL 101 (272)
T ss_dssp CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHTCCGGGSSCCEE
T ss_pred cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 8999999999999999999999999999999997653321 22 3688999999999999888865 4999
Q ss_pred EECCc-----ch--------------------------HhhhhhhcCCC-EEEEEcccccccCCCCcccccchHHHH--H
Q 021928 167 ICPSE-----GF--------------------------ISNAGSLKGVQ-HVILLSQLSVYRGSGGIQALMKGNARK--L 212 (305)
Q Consensus 167 i~~~~-----g~--------------------------~~~~a~~~gv~-~~V~iSS~~~~~~~~~~~~~~~~~~~~--~ 212 (305)
|++++ +. +...+++.+.. +||++||..++.+......|...+... +
T Consensus 102 vnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~~IV~isS~~~~~~~~~~~~Y~asKaa~~~l 181 (272)
T 2nwq_A 102 INNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKWPYPGSHVYGGTKAFVEQF 181 (272)
T ss_dssp EECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGTSCCTTCHHHHHHHHHHHHH
T ss_pred EECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeCCchhccCCCCCchHHHHHHHHHHH
Confidence 98732 10 11123345667 999999998876655554554432211 1
Q ss_pred HHHHHHHHHhCCCCEEEEecCCcccCCCCC----cceeeecCCCCCCccCHHHHHHHHHHHhhCCCC-CCcEEEEecCCc
Q 021928 213 AEQDESMLMASGIPYTIIRTGVLQNTPGGK----QGFQFEEGCAANGSLSKEDAAFICVEALESIPQ-TGLIFEVVNGEE 287 (305)
Q Consensus 213 ~~~aE~~l~~~gi~~tilRPg~l~~~~~~~----~~~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~~-~~~~~~v~~g~~ 287 (305)
.+.....+...+++++.|+||++....... ..............++++|+|++++.++.++.. .++.+.+.++..
T Consensus 182 ~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~~l~s~~~~~~g~~i~v~~~~~ 261 (272)
T 2nwq_A 182 SLNLRCDLQGTGVRVTNLEPGLCESEFSLVRFGGDQARYDKTYAGAHPIQPEDIAETIFWIMNQPAHLNINSLEIMPVSQ 261 (272)
T ss_dssp HHHHHTTCTTSCCEEEEEEECSBC--------------------CCCCBCHHHHHHHHHHHHTSCTTEEEEEEEEEETTE
T ss_pred HHHHHHHhCccCeEEEEEEcCCCcCcchhcccccchHHHHHhhccCCCCCHHHHHHHHHHHhCCCccCccceEEEeeccC
Confidence 111111122368999999999965332110 000000000112357999999999999986553 467777776643
|
| >3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} | Back alignment and structure |
|---|
Probab=99.71 E-value=7.8e-17 Score=144.63 Aligned_cols=190 Identities=12% Similarity=0.052 Sum_probs=126.2
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh------hcCCCcEEeecCCCCHHHHHHHhcC-------
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTALRG------- 162 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~------~~~~~v~~v~~D~~d~~~~~~~~~~------- 162 (305)
..+++|+||||+|+||++++++|+++|++|++++|+.+...+ ..+.++.++.+|++|.+++.++++.
T Consensus 32 l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~ 111 (279)
T 3ctm_A 32 LKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVEETISQQEKDFGT 111 (279)
T ss_dssp CTTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCHHHHHHHHHHHHHHhCC
Confidence 456899999999999999999999999999999998754321 1245688999999999888877754
Q ss_pred ccEEEECCc-----c----h-----------------------HhhhhhhcCCCEEEEEcccccccC--CCCcccccchH
Q 021928 163 VRSIICPSE-----G----F-----------------------ISNAGSLKGVQHVILLSQLSVYRG--SGGIQALMKGN 208 (305)
Q Consensus 163 ~d~Vi~~~~-----g----~-----------------------~~~~a~~~gv~~~V~iSS~~~~~~--~~~~~~~~~~~ 208 (305)
+|+|||+++ + . +...+++.+.++||++||..++.+ ......|..++
T Consensus 112 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~Y~~sK 191 (279)
T 3ctm_A 112 IDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNGKGSLIITSSISGKIVNIPQLQAPYNTAK 191 (279)
T ss_dssp CSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCCTTSCC---CCHHHHHHHH
T ss_pred CCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEECchHhccCCCCCCcccHHHHH
Confidence 899998732 1 0 112234567889999999987655 33333443322
Q ss_pred HH--HHHHHHHHHHHhCCCCEEEEecCCcccCCCCCc--ce--eeecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEE
Q 021928 209 AR--KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQ--GF--QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIF 280 (305)
Q Consensus 209 ~~--~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~~--~~--~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~ 280 (305)
.. .+.+.....+...+ .++.|+||++........ .. .+........+++++|+|++++.++..+. ..|+.+
T Consensus 192 ~a~~~~~~~la~e~~~~~-~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~~~~tG~~i 270 (279)
T 3ctm_A 192 AACTHLAKSLAIEWAPFA-RVNTISPGYIDTDITDFASKDMKAKWWQLTPLGREGLTQELVGGYLYLASNASTFTTGSDV 270 (279)
T ss_dssp HHHHHHHHHHHHHTTTTC-EEEEEEECSBSSTTTSSCCHHHHHHHHHHSTTCSCBCGGGTHHHHHHHHSGGGTTCCSCEE
T ss_pred HHHHHHHHHHHHHhcccC-CEEEEeccCCccccccccChHHHHHHHHhCCccCCcCHHHHHHHHHHHhCccccCccCCEE
Confidence 11 11111111122356 899999999654322110 00 00011122347899999999999997543 468999
Q ss_pred EEecCC
Q 021928 281 EVVNGE 286 (305)
Q Consensus 281 ~v~~g~ 286 (305)
++.+|.
T Consensus 271 ~vdgG~ 276 (279)
T 3ctm_A 271 VIDGGY 276 (279)
T ss_dssp EESTTC
T ss_pred EECCCe
Confidence 998774
|
| >3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.70 E-value=6.5e-16 Score=138.82 Aligned_cols=190 Identities=13% Similarity=0.045 Sum_probs=128.0
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcC-------------cchhh------hhcCCCcEEeecCCCCHHHHH
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKD-------------KRNAM------ESFGTYVESMAGDASNKKFLK 157 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~-------------~~~~~------~~~~~~v~~v~~D~~d~~~~~ 157 (305)
.+|+++||||+++||++++++|+++|++|++++|+ .+... ...+.++.++.+|++|.+++.
T Consensus 10 ~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~ 89 (277)
T 3tsc_A 10 EGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFDRLR 89 (277)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHH
Confidence 45899999999999999999999999999999883 22211 122457889999999998888
Q ss_pred HHhc-------CccEEEECCcc----h----------------------Hhh----hhhhcC-CCEEEEEcccccccCCC
Q 021928 158 TALR-------GVRSIICPSEG----F----------------------ISN----AGSLKG-VQHVILLSQLSVYRGSG 199 (305)
Q Consensus 158 ~~~~-------~~d~Vi~~~~g----~----------------------~~~----~a~~~g-v~~~V~iSS~~~~~~~~ 199 (305)
++++ .+|++|++++. . +.. ...+.+ -.+||++||..++.+..
T Consensus 90 ~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~ 169 (277)
T 3tsc_A 90 KVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMKMQP 169 (277)
T ss_dssp HHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCS
T ss_pred HHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEccHhhCCCCC
Confidence 7765 58999988431 0 011 122233 46999999998887766
Q ss_pred CcccccchHH--HHHHHHHHHHHHhCCCCEEEEecCCcccCCCCC-------------ccee-eecCCCCCCccCHHHHH
Q 021928 200 GIQALMKGNA--RKLAEQDESMLMASGIPYTIIRTGVLQNTPGGK-------------QGFQ-FEEGCAANGSLSKEDAA 263 (305)
Q Consensus 200 ~~~~~~~~~~--~~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~-------------~~~~-~~~~~~~~~~Is~~DvA 263 (305)
....|..++. ..+.+.....+...++.++.|+||++....... .... .........+.+++|+|
T Consensus 170 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~r~~~pedvA 249 (277)
T 3tsc_A 170 FMIHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPMGSGDMVTAVGQAMETNPQLSHVLTPFLPDWVAEPEDIA 249 (277)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSGGGSHHHHHHHHHHHHTCGGGTTTTCCSSSCSCBCHHHHH
T ss_pred CchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeCCCcCCcccchhhhhhhhcccccHHHHHHhhhccCCCCCCHHHHH
Confidence 6656655432 112222223345679999999999964332110 0000 00011112467899999
Q ss_pred HHHHHHhhCCC--CCCcEEEEecCC
Q 021928 264 FICVEALESIP--QTGLIFEVVNGE 286 (305)
Q Consensus 264 ~~iv~~l~~~~--~~~~~~~v~~g~ 286 (305)
++++.++.++. ..|+++++.+|.
T Consensus 250 ~~v~~L~s~~~~~itG~~i~vdGG~ 274 (277)
T 3tsc_A 250 DTVCWLASDESRKVTAAQIPVDQGS 274 (277)
T ss_dssp HHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred HHHHHHhCccccCCcCCEEeeCCCc
Confidence 99999997544 468999999875
|
| >3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.70 E-value=1.4e-15 Score=136.52 Aligned_cols=191 Identities=17% Similarity=0.142 Sum_probs=125.6
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcch-hh------hhcCCCcEEeecCCCCHHHHHHHhc-------
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-AM------ESFGTYVESMAGDASNKKFLKTALR------- 161 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~-~~------~~~~~~v~~v~~D~~d~~~~~~~~~------- 161 (305)
..+|+++||||+|+||++++++|+++|++|+++.|+... .. +..+.++.++.+|++|.++++++++
T Consensus 29 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 108 (271)
T 3v2g_A 29 LAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEALG 108 (271)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 356999999999999999999999999999998776533 11 1224578899999999988887776
Q ss_pred CccEEEECCcc----h----------------------Hhhhhhh--cCCCEEEEEcccccccC-CCCcccccchHH--H
Q 021928 162 GVRSIICPSEG----F----------------------ISNAGSL--KGVQHVILLSQLSVYRG-SGGIQALMKGNA--R 210 (305)
Q Consensus 162 ~~d~Vi~~~~g----~----------------------~~~~a~~--~gv~~~V~iSS~~~~~~-~~~~~~~~~~~~--~ 210 (305)
++|++|++++. . +..++.. .+..+||++||..+... ..+...|..++. .
T Consensus 109 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS~~~~~~~~~~~~~Y~asKaa~~ 188 (271)
T 3v2g_A 109 GLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGSNLAELVPWPGISLYSASKAALA 188 (271)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCGGGTCCCSTTCHHHHHHHHHHH
T ss_pred CCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeChhhccCCCCCchHHHHHHHHHH
Confidence 78999988431 0 1111111 13469999988755443 344445544332 1
Q ss_pred HHHHHHHHHHHhCCCCEEEEecCCcccCCCCCcce---eeecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEEEEecC
Q 021928 211 KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGF---QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVNG 285 (305)
Q Consensus 211 ~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~~~~---~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~v~~g 285 (305)
.+.+.....+...+++++.|+||++.......... ..........+.+++|+|++++.++.... ..|++++|.+|
T Consensus 189 ~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~fL~s~~~~~itG~~i~vdGG 268 (271)
T 3v2g_A 189 GLTKGLARDLGPRGITVNIVHPGSTDTDMNPADGDHAEAQRERIATGSYGEPQDIAGLVAWLAGPQGKFVTGASLTIDGG 268 (271)
T ss_dssp HHHHHHHHHHGGGTCEEEEEEECSBCSSSSCSSCSSHHHHHHTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred HHHHHHHHHhhhhCeEEEEEecCCCcCCcccccchhHHHHHhcCCCCCCCCHHHHHHHHHHHhCcccCCccCCEEEeCcC
Confidence 11222223345579999999999965432211100 00111222456789999999999986433 46899999877
Q ss_pred C
Q 021928 286 E 286 (305)
Q Consensus 286 ~ 286 (305)
.
T Consensus 269 ~ 269 (271)
T 3v2g_A 269 A 269 (271)
T ss_dssp T
T ss_pred c
Confidence 4
|
| >1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=2.1e-16 Score=139.95 Aligned_cols=189 Identities=13% Similarity=0.104 Sum_probs=122.7
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCe-EEEEEcCcch--hhh---hc-CCCcEEeecCCCCH-HHHHHHhc-------
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTR-IKALVKDKRN--AME---SF-GTYVESMAGDASNK-KFLKTALR------- 161 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~-V~~~~R~~~~--~~~---~~-~~~v~~v~~D~~d~-~~~~~~~~------- 161 (305)
.+|+|+||||+|+||++++++|+++|++ |+++.|++.. ..+ .. +.++.++.+|++|. +++.++++
T Consensus 4 ~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g 83 (254)
T 1sby_A 4 TNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQLK 83 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHHS
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchHHHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHHHhcC
Confidence 4589999999999999999999999997 9999998632 111 11 23688999999997 77776665
Q ss_pred CccEEEECCcch------------------Hhhh----hhhcC---CCEEEEEcccccccCCCCcccccchHHH--HHHH
Q 021928 162 GVRSIICPSEGF------------------ISNA----GSLKG---VQHVILLSQLSVYRGSGGIQALMKGNAR--KLAE 214 (305)
Q Consensus 162 ~~d~Vi~~~~g~------------------~~~~----a~~~g---v~~~V~iSS~~~~~~~~~~~~~~~~~~~--~~~~ 214 (305)
++|+|||+++.. +..+ ..+.+ ..+||++||..++.+......|..++.. .+.+
T Consensus 84 ~id~lv~~Ag~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~ 163 (254)
T 1sby_A 84 TVDILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPVYSASKAAVVSFTN 163 (254)
T ss_dssp CCCEEEECCCCCCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEECCccCCHHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhccCCCCchHHHHHHHHHHHHHH
Confidence 789999984410 1111 11221 4689999999888765555555443321 1111
Q ss_pred HHHHHHHhCCCCEEEEecCCcccCCC-CCcce-----eeecCCCCCCccCHHHHHHHHHHHhhCCCCCCcEEEEecCC
Q 021928 215 QDESMLMASGIPYTIIRTGVLQNTPG-GKQGF-----QFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVVNGE 286 (305)
Q Consensus 215 ~aE~~l~~~gi~~tilRPg~l~~~~~-~~~~~-----~~~~~~~~~~~Is~~DvA~~iv~~l~~~~~~~~~~~v~~g~ 286 (305)
.....+...++++++|+||++..... ..... ....-.......+++|+|++++.++. ....++.|++.+|.
T Consensus 164 ~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~i~~~~~-~~~~G~~~~v~gG~ 240 (254)
T 1sby_A 164 SLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLLSHPTQTSEQCGQNFVKAIE-ANKNGAIWKLDLGT 240 (254)
T ss_dssp HHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHHHTTSCCEEHHHHHHHHHHHHH-HCCTTCEEEEETTE
T ss_pred HHHHHhccCCeEEEEEecCCccCccccccchhhhhhHHHHHHHhcCCCCCHHHHHHHHHHHHH-cCCCCCEEEEeCCc
Confidence 11122334799999999999543211 00000 00000001233589999999999987 34568999999874
|
| >3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=99.70 E-value=2e-16 Score=142.95 Aligned_cols=188 Identities=14% Similarity=0.086 Sum_probs=125.9
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhh-------------hhcCCCcEEeecCCCCHHHHHHHhc-
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM-------------ESFGTYVESMAGDASNKKFLKTALR- 161 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~-------------~~~~~~v~~v~~D~~d~~~~~~~~~- 161 (305)
..+++++||||+|+||++++++|+++|++|++++|+.++.. ...+.++.++.+|++|.++++++++
T Consensus 7 l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~ 86 (285)
T 3sc4_A 7 LRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAAVAK 86 (285)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHH
Confidence 45689999999999999999999999999999999876311 1224578999999999988887775
Q ss_pred ------CccEEEECCcch--------------------------H----hhhhhhcCCCEEEEEcccccccCC-CCcccc
Q 021928 162 ------GVRSIICPSEGF--------------------------I----SNAGSLKGVQHVILLSQLSVYRGS-GGIQAL 204 (305)
Q Consensus 162 ------~~d~Vi~~~~g~--------------------------~----~~~a~~~gv~~~V~iSS~~~~~~~-~~~~~~ 204 (305)
.+|++|++++.. + ....++.+..+||++||..+..+. .....|
T Consensus 87 ~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~Y 166 (285)
T 3sc4_A 87 TVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEPKWLRPTPY 166 (285)
T ss_dssp HHHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSCEEEECCCCCCCSGGGSCSHHH
T ss_pred HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhccCCCCCCchH
Confidence 789999884310 1 112334466799999998776553 334445
Q ss_pred cchHH--HHHHHHHHHHHHhCCCCEEEEecCCcccCCCCCcceeeecCCCCCCccCHHHHHHHHHHHhhCCC-CCCcEEE
Q 021928 205 MKGNA--RKLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIP-QTGLIFE 281 (305)
Q Consensus 205 ~~~~~--~~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~~~~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~-~~~~~~~ 281 (305)
..+++ ..+.+.....+...++.++.|+||++.+.+.... . .........+.+++|+|++++.++.++. ..|+.+.
T Consensus 167 ~asKaal~~~~~~la~e~~~~gI~vn~v~PG~~v~t~~~~~-~-~~~~~~~~r~~~pedvA~~~~~l~s~~~~~tG~~i~ 244 (285)
T 3sc4_A 167 MMAKYGMTLCALGIAEELRDAGIASNTLWPRTTVATAAVQN-L-LGGDEAMARSRKPEVYADAAYVVLNKPSSYTGNTLL 244 (285)
T ss_dssp HHHHHHHHHHHHHHHHHTGGGTCEEEEEECSSCBCCHHHHH-H-HTSCCCCTTCBCTHHHHHHHHHHHTSCTTCCSCEEE
T ss_pred HHHHHHHHHHHHHHHHHhcccCcEEEEEeCCCccccHHHHh-h-ccccccccCCCCHHHHHHHHHHHhCCcccccceEEE
Confidence 44332 1111222233445799999999996432211000 0 0011122356789999999999998765 4577776
Q ss_pred EecC
Q 021928 282 VVNG 285 (305)
Q Consensus 282 v~~g 285 (305)
+.++
T Consensus 245 ~dgg 248 (285)
T 3sc4_A 245 CEDV 248 (285)
T ss_dssp HHHH
T ss_pred EcCc
Confidence 6654
|
| >1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.70 E-value=5.1e-16 Score=138.18 Aligned_cols=181 Identities=13% Similarity=0.127 Sum_probs=121.6
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCC---CeEEEEEcCcchhhhh-----cCCCcEEeecCCCCHHHHHHHhc-----
Q 021928 95 PEARDAVLVTDGDSDIGQMVILSLIVKR---TRIKALVKDKRNAMES-----FGTYVESMAGDASNKKFLKTALR----- 161 (305)
Q Consensus 95 ~~~~~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~R~~~~~~~~-----~~~~v~~v~~D~~d~~~~~~~~~----- 161 (305)
..++++|+||||+|+||++++++|+++| ++|++++|+.++.... ...++.++.+|++|.+++.++++
T Consensus 18 ~~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 97 (267)
T 1sny_A 18 GSHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGV 97 (267)
T ss_dssp --CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHHHHhhccCCceEEEEecCCChHHHHHHHHHHHHh
Confidence 3456899999999999999999999999 9999999987642211 13468999999999888887776
Q ss_pred ----CccEEEECCcc-----h----------------------Hhhh----hhhc------C-----CCEEEEEcccccc
Q 021928 162 ----GVRSIICPSEG-----F----------------------ISNA----GSLK------G-----VQHVILLSQLSVY 195 (305)
Q Consensus 162 ----~~d~Vi~~~~g-----~----------------------~~~~----a~~~------g-----v~~~V~iSS~~~~ 195 (305)
++|+|||+++. . +..+ ..+. + ..+||++||..++
T Consensus 98 ~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~ 177 (267)
T 1sny_A 98 TKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGS 177 (267)
T ss_dssp HGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGC
T ss_pred cCCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEEEEeccccc
Confidence 79999988431 0 1111 1111 2 5799999999887
Q ss_pred cCCC---CcccccchHHH--HHHHHHHHHHHhCCCCEEEEecCCcccCCCCCcceeeecCCCCCCccCHHHHHHHHHHHh
Q 021928 196 RGSG---GIQALMKGNAR--KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEAL 270 (305)
Q Consensus 196 ~~~~---~~~~~~~~~~~--~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~~~~~~~~~~~~~~~Is~~DvA~~iv~~l 270 (305)
.+.. +...|..++.. .+.+.....+...++++++|+||++....... ...++++|+|+.++.++
T Consensus 178 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-----------~~~~~~~~~a~~~~~~~ 246 (267)
T 1sny_A 178 IQGNTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGS-----------SAPLDVPTSTGQIVQTI 246 (267)
T ss_dssp STTCCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCT-----------TCSBCHHHHHHHHHHHH
T ss_pred ccCCCCCCchHHHHHHHHHHHHHHHHHHHhhcCCcEEEEeCCcceecCCCCC-----------CCCCCHHHHHHHHHHHH
Confidence 6532 23334332221 11111222234479999999999975433211 24689999999999999
Q ss_pred hCCC--CCCcEEEEecCC
Q 021928 271 ESIP--QTGLIFEVVNGE 286 (305)
Q Consensus 271 ~~~~--~~~~~~~v~~g~ 286 (305)
.... ..+..+.+.++.
T Consensus 247 ~~~~~~~~G~~~~~~g~~ 264 (267)
T 1sny_A 247 SKLGEKQNGGFVNYDGTP 264 (267)
T ss_dssp HHCCGGGTTCEECTTSCB
T ss_pred HhcCcCCCCcEEccCCcC
Confidence 7543 356666655443
|
| >4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.70 E-value=3.7e-16 Score=139.99 Aligned_cols=188 Identities=17% Similarity=0.171 Sum_probs=121.1
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEE-EcCcchhhh------hcCCCcEEeecCCCCHHHHHHHhc-------Cc
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKAL-VKDKRNAME------SFGTYVESMAGDASNKKFLKTALR-------GV 163 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~-~R~~~~~~~------~~~~~v~~v~~D~~d~~~~~~~~~-------~~ 163 (305)
+++|+||||+|+||++++++|+++|++|+++ .|+.+...+ ..+.++.++.+|++|.++++++++ ++
T Consensus 26 ~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i 105 (272)
T 4e3z_A 26 TPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQFGRL 105 (272)
T ss_dssp SCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence 5799999999999999999999999999887 555443221 124578999999999988877765 67
Q ss_pred cEEEECCc-----ch----------------------Hhhh----hhh---cCCCEEEEEcccccccCCC-CcccccchH
Q 021928 164 RSIICPSE-----GF----------------------ISNA----GSL---KGVQHVILLSQLSVYRGSG-GIQALMKGN 208 (305)
Q Consensus 164 d~Vi~~~~-----g~----------------------~~~~----a~~---~gv~~~V~iSS~~~~~~~~-~~~~~~~~~ 208 (305)
|+||++++ .. +..+ ..+ .+..+||++||..++.+.. ....|..++
T Consensus 106 d~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~asK 185 (272)
T 4e3z_A 106 DGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGSATQYVDYAASK 185 (272)
T ss_dssp CEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHHCCTTTCHHHHHHH
T ss_pred CEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhccCCCCCcchhHHHH
Confidence 99998733 10 0111 111 2456899999988765433 333454433
Q ss_pred H--HHHHHHHHHHHHhCCCCEEEEecCCcccCCCCC----c-ceeeecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcE
Q 021928 209 A--RKLAEQDESMLMASGIPYTIIRTGVLQNTPGGK----Q-GFQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLI 279 (305)
Q Consensus 209 ~--~~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~----~-~~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~ 279 (305)
+ ..+.+.....+...+++++.|+||++....... . ............+.+++|+|++++.++.... ..|++
T Consensus 186 aa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~s~~~~~~tG~~ 265 (272)
T 4e3z_A 186 AAIDTFTIGLAREVAAEGIRVNAVRPGIIETDLHASGGLPDRAREMAPSVPMQRAGMPEEVADAILYLLSPSASYVTGSI 265 (272)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECSBC------------------CCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred HHHHHHHHHHHHHHHHcCcEEEEEecCCCcCCcccccCChHHHHHHhhcCCcCCCcCHHHHHHHHHHHhCCccccccCCE
Confidence 2 111122223344579999999999965432111 0 0001112223456789999999999996543 46899
Q ss_pred EEEecC
Q 021928 280 FEVVNG 285 (305)
Q Consensus 280 ~~v~~g 285 (305)
|++.+|
T Consensus 266 i~vdgG 271 (272)
T 4e3z_A 266 LNVSGG 271 (272)
T ss_dssp EEESTT
T ss_pred EeecCC
Confidence 999876
|
| >3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=99.70 E-value=5.7e-16 Score=138.03 Aligned_cols=194 Identities=13% Similarity=0.147 Sum_probs=121.9
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcC-cchhh------hhcCCCcEEeecCCCCHHHHHHHhc-------
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKD-KRNAM------ESFGTYVESMAGDASNKKFLKTALR------- 161 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~-~~~~~------~~~~~~v~~v~~D~~d~~~~~~~~~------- 161 (305)
..+|+++||||+|+||++++++|+++|++|+++.+. .+... +..+.++.++.+|++|.++++++++
T Consensus 6 l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 85 (259)
T 3edm_A 6 FTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADKFG 85 (259)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence 346899999999999999999999999999998554 33321 1224578999999999988887775
Q ss_pred CccEEEECCcch---------------------------Hhhhhhhc--CCCEEEEEcccccc-cCCCCcccccchHHHH
Q 021928 162 GVRSIICPSEGF---------------------------ISNAGSLK--GVQHVILLSQLSVY-RGSGGIQALMKGNARK 211 (305)
Q Consensus 162 ~~d~Vi~~~~g~---------------------------~~~~a~~~--gv~~~V~iSS~~~~-~~~~~~~~~~~~~~~~ 211 (305)
++|++|++++.. +..++... .-.+||++||..++ .+..+...|..++...
T Consensus 86 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~asKaa~ 165 (259)
T 3edm_A 86 EIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFSSQAGRDGGGPGALAYATSKGAV 165 (259)
T ss_dssp SEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHCCSTTCHHHHHHHHHH
T ss_pred CCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEcCHHhccCCCCCcHHHHHHHHHH
Confidence 689999884310 11111111 12489999998877 4444555554433211
Q ss_pred --HHHHHHHHHHhCCCCEEEEecCCcccCCCCC---cc--eeeecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEEEE
Q 021928 212 --LAEQDESMLMASGIPYTIIRTGVLQNTPGGK---QG--FQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEV 282 (305)
Q Consensus 212 --~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~---~~--~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~v 282 (305)
+.+.....+.. .+.++.|.||++....... .. ..+........+.+++|+|++++.++.+.. ..|+.+++
T Consensus 166 ~~l~~~la~e~~~-~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~v~~L~s~~~~~itG~~i~v 244 (259)
T 3edm_A 166 MTFTRGLAKEVGP-KIRVNAVCPGMISTTFHDTFTKPEVRERVAGATSLKREGSSEDVAGLVAFLASDDAAYVTGACYDI 244 (259)
T ss_dssp HHHHHHHHHHHTT-TCEEEEEEECCBCC----------------------CCBCHHHHHHHHHHHHSGGGTTCCSCEEEE
T ss_pred HHHHHHHHHHHCC-CCEEEEEEECCCcCcccccccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCccCCEEEE
Confidence 11111111223 3999999999964332110 00 001111222456789999999999997543 36899999
Q ss_pred ecCCcCHH
Q 021928 283 VNGEEKVS 290 (305)
Q Consensus 283 ~~g~~s~~ 290 (305)
.+|.....
T Consensus 245 dGg~~~~~ 252 (259)
T 3edm_A 245 NGGVLFSE 252 (259)
T ss_dssp SBCSSBC-
T ss_pred CCCcCCCC
Confidence 98875443
|
| >4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} | Back alignment and structure |
|---|
Probab=99.70 E-value=1e-15 Score=136.35 Aligned_cols=192 Identities=16% Similarity=0.121 Sum_probs=134.2
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh------hcCCCcEEeecCCCCHHHHHHHhc-------
Q 021928 95 PEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTALR------- 161 (305)
Q Consensus 95 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~------~~~~~v~~v~~D~~d~~~~~~~~~------- 161 (305)
+.++|+++||||+++||++++++|++.|++|+++.|++++..+ ..+.++.++.+|++|.++++++++
T Consensus 4 sL~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G 83 (254)
T 4fn4_A 4 SLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETYS 83 (254)
T ss_dssp GGTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 4567999999999999999999999999999999999866332 234578999999999988876653
Q ss_pred CccEEEECCc---c---h-------------------------HhhhhhhcCCCEEEEEcccccccCCCCcccccchHH-
Q 021928 162 GVRSIICPSE---G---F-------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA- 209 (305)
Q Consensus 162 ~~d~Vi~~~~---g---~-------------------------~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~- 209 (305)
.+|++|++++ . + ....+++.+-.+||++||..+..+......|..++.
T Consensus 84 ~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~g~~~~~~~~~Y~asKaa 163 (254)
T 4fn4_A 84 RIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAGIRGGFAGAPYTVAKHG 163 (254)
T ss_dssp CCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCSSSSCHHHHHHHHH
T ss_pred CCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEechhhcCCCCCChHHHHHHHH
Confidence 6799998743 1 0 111234456679999999988877666666655432
Q ss_pred -HHHHHHHHHHHHhCCCCEEEEecCCcccCCCCCc----cee---e-ecCCCCCCccCHHHHHHHHHHHhhCCC--CCCc
Q 021928 210 -RKLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQ----GFQ---F-EEGCAANGSLSKEDAAFICVEALESIP--QTGL 278 (305)
Q Consensus 210 -~~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~~----~~~---~-~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~ 278 (305)
..+.+.....+...+|++..|.||++........ ... . ........+-.++|+|.+++.++.+.. -.|+
T Consensus 164 l~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~R~g~pediA~~v~fLaSd~a~~iTG~ 243 (254)
T 4fn4_A 164 LIGLTRSIAAHYGDQGIRAVAVLPGTVKTNIGLGSSKPSELGMRTLTKLMSLSSRLAEPEDIANVIVFLASDEASFVNGD 243 (254)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECSBCSSCTTSCSSCCHHHHHHHHHHHTTCCCCBCHHHHHHHHHHHHSGGGTTCCSC
T ss_pred HHHHHHHHHHHhhhhCeEEEEEEeCCCCCcccccccCCcHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHhCchhcCCcCC
Confidence 2233334455667899999999999643321110 000 0 000111334578999999999996543 3689
Q ss_pred EEEEecCC
Q 021928 279 IFEVVNGE 286 (305)
Q Consensus 279 ~~~v~~g~ 286 (305)
++.|.+|-
T Consensus 244 ~i~VDGG~ 251 (254)
T 4fn4_A 244 AVVVDGGL 251 (254)
T ss_dssp EEEESTTG
T ss_pred EEEeCCCc
Confidence 99998774
|
| >3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.69 E-value=9.8e-16 Score=139.36 Aligned_cols=191 Identities=13% Similarity=0.090 Sum_probs=129.2
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCc------------chhh------hhcCCCcEEeecCCCCHHHHH
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK------------RNAM------ESFGTYVESMAGDASNKKFLK 157 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~------------~~~~------~~~~~~v~~v~~D~~d~~~~~ 157 (305)
..+|+++||||+++||++++++|+++|++|++++|++ +... +..+.++.++.+|++|.+++.
T Consensus 26 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~ 105 (299)
T 3t7c_A 26 VEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDAMQ 105 (299)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHH
Confidence 3468999999999999999999999999999999872 2211 123457899999999998888
Q ss_pred HHhc-------CccEEEECCcc------h---------------------Hhhh----hhh-cCCCEEEEEcccccccCC
Q 021928 158 TALR-------GVRSIICPSEG------F---------------------ISNA----GSL-KGVQHVILLSQLSVYRGS 198 (305)
Q Consensus 158 ~~~~-------~~d~Vi~~~~g------~---------------------~~~~----a~~-~gv~~~V~iSS~~~~~~~ 198 (305)
++++ .+|++|++++. . +..+ ..+ .+..+||++||..++.+.
T Consensus 106 ~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~isS~~~~~~~ 185 (299)
T 3t7c_A 106 AAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLRGA 185 (299)
T ss_dssp HHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEEEEECCGGGTSCC
T ss_pred HHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCC
Confidence 7765 68999987331 0 1111 122 235799999999888776
Q ss_pred CCcccccchHHH--HHHHHHHHHHHhCCCCEEEEecCCcccCCCCCcc-----------eee--------ecCCCCCCcc
Q 021928 199 GGIQALMKGNAR--KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQG-----------FQF--------EEGCAANGSL 257 (305)
Q Consensus 199 ~~~~~~~~~~~~--~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~~~-----------~~~--------~~~~~~~~~I 257 (305)
.....|..++.. .+.+.....+...++.++.|+||++......... ... ........+.
T Consensus 186 ~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~r~~ 265 (299)
T 3t7c_A 186 ENIGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPMLLNEPTYRMFRPDLENPTVEDFQVASRQMHVLPIPYV 265 (299)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHHHHHSSSSCSCB
T ss_pred CCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCccCccccccchhhhhhhhhccchhhHHHHHhhhhcccCcCCC
Confidence 666666544321 1222222334557999999999996543221100 000 0011114567
Q ss_pred CHHHHHHHHHHHhhCCC--CCCcEEEEecCC
Q 021928 258 SKEDAAFICVEALESIP--QTGLIFEVVNGE 286 (305)
Q Consensus 258 s~~DvA~~iv~~l~~~~--~~~~~~~v~~g~ 286 (305)
+++|+|++++.++.+.. ..|++++|.+|.
T Consensus 266 ~pedvA~~v~fL~s~~a~~itG~~i~vdGG~ 296 (299)
T 3t7c_A 266 EPADISNAILFLVSDDARYITGVSLPVDGGA 296 (299)
T ss_dssp CHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred CHHHHHHHHHHHhCcccccCcCCEEeeCCCc
Confidence 89999999999997543 468999999874
|
| >3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.69 E-value=1.3e-16 Score=142.72 Aligned_cols=192 Identities=12% Similarity=0.129 Sum_probs=130.4
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh-------c-CCCcEEeecCCCCHHHHHHHhc---Ccc
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------F-GTYVESMAGDASNKKFLKTALR---GVR 164 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~-------~-~~~v~~v~~D~~d~~~~~~~~~---~~d 164 (305)
..+|+++||||+|+||++++++|+++|++|+++.|+++...+. . ...+.++.+|++|.+++.++++ ++|
T Consensus 8 l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id 87 (267)
T 3t4x_A 8 LKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEKYPKVD 87 (267)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHHCCCCS
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHhcCCCC
Confidence 3468999999999999999999999999999999997653221 1 2457889999999988887775 689
Q ss_pred EEEECCcch------------------------------HhhhhhhcCCCEEEEEcccccccCCCCcccccchHHH--HH
Q 021928 165 SIICPSEGF------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--KL 212 (305)
Q Consensus 165 ~Vi~~~~g~------------------------------~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~--~~ 212 (305)
++|++++.. ....+++.+..+||++||..++.+......|..++.. .+
T Consensus 88 ~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l 167 (267)
T 3t4x_A 88 ILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEGRVIFIASEAAIMPSQEMAHYSATKTMQLSL 167 (267)
T ss_dssp EEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTEEEEEEECCGGGTSCCTTCHHHHHHHHHHHHH
T ss_pred EEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEEcchhhccCCCcchHHHHHHHHHHHH
Confidence 999884310 1112334566799999999888776666666544321 11
Q ss_pred HHHHHHHHHhCCCCEEEEecCCcccCC--------CCCcceee-----------ecCCCCCCccCHHHHHHHHHHHhhCC
Q 021928 213 AEQDESMLMASGIPYTIIRTGVLQNTP--------GGKQGFQF-----------EEGCAANGSLSKEDAAFICVEALESI 273 (305)
Q Consensus 213 ~~~aE~~l~~~gi~~tilRPg~l~~~~--------~~~~~~~~-----------~~~~~~~~~Is~~DvA~~iv~~l~~~ 273 (305)
.+.....+...++.+..|+||++.... ........ ........+.+++|+|++++.++.+.
T Consensus 168 ~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~fL~s~~ 247 (267)
T 3t4x_A 168 SRSLAELTTGTNVTVNTIMPGSTLTEGVETMLNSLYPNEQLTIEEAEKRFMKENRPTSIIQRLIRPEEIAHLVTFLSSPL 247 (267)
T ss_dssp HHHHHHHTTTSEEEEEEEEECCBCCHHHHHHHHHSSTTSCCCHHHHHHHHHHHHCTTCSSCSCBCTHHHHHHHHHHHSGG
T ss_pred HHHHHHHhCCCCeEEEEEeCCeecCccHHHHHhhcCcccCCCHHHHHHHHhhccCCcccccCccCHHHHHHHHHHHcCcc
Confidence 111222233468999999999854220 00000000 00112245788999999999999753
Q ss_pred C--CCCcEEEEecCCc
Q 021928 274 P--QTGLIFEVVNGEE 287 (305)
Q Consensus 274 ~--~~~~~~~v~~g~~ 287 (305)
. ..|+++++.+|..
T Consensus 248 ~~~itG~~i~vdGG~~ 263 (267)
T 3t4x_A 248 SSAINGSALRIDGGLV 263 (267)
T ss_dssp GTTCCSCEEEESTTCS
T ss_pred ccCccCCeEEECCCcc
Confidence 3 4689999998753
|
| >3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.69 E-value=5.7e-16 Score=138.71 Aligned_cols=178 Identities=11% Similarity=0.095 Sum_probs=116.2
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh------cCCCcEEeecCCCCHHHHHHHhc-------Cc
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GV 163 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~~~v~~v~~D~~d~~~~~~~~~-------~~ 163 (305)
++|++|||||+|+||++++++|+++|++|++++|++++..+. .+..+.++.+|++|.+++.++++ .+
T Consensus 3 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 82 (264)
T 3tfo_A 3 MDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWGRI 82 (264)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 358999999999999999999999999999999997653321 24568899999999988877665 78
Q ss_pred cEEEECCcch------------------------------HhhhhhhcCCCEEEEEcccccccCCCCcccccchHHHHHH
Q 021928 164 RSIICPSEGF------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLA 213 (305)
Q Consensus 164 d~Vi~~~~g~------------------------------~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~~~~ 213 (305)
|++|++++.. +...+++.+..+||++||..++.+......|..++..-..
T Consensus 83 D~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~~~~Y~asKaal~~ 162 (264)
T 3tfo_A 83 DVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSGQIINIGSIGALSVVPTAAVYCATKFAVRA 162 (264)
T ss_dssp CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHHHHHHHHH
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEEcCHHHcccCCCChhHHHHHHHHHH
Confidence 9999884310 1112344567899999999888776665556544321111
Q ss_pred HHHHHHHHh-CCCCEEEEecCCcccCCCCC--cceeee-cCCCCCCccCHHHHHHHHHHHhhCCCC
Q 021928 214 EQDESMLMA-SGIPYTIIRTGVLQNTPGGK--QGFQFE-EGCAANGSLSKEDAAFICVEALESIPQ 275 (305)
Q Consensus 214 ~~aE~~l~~-~gi~~tilRPg~l~~~~~~~--~~~~~~-~~~~~~~~Is~~DvA~~iv~~l~~~~~ 275 (305)
..+.+-.+ .+++++.|+||++....... ...... .........+++|+|++++.++..+..
T Consensus 163 -l~~~la~e~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~~l~s~~~~ 227 (264)
T 3tfo_A 163 -ISDGLRQESTNIRVTCVNPGVVESELAGTITHEETMAAMDTYRAIALQPADIARAVRQVIEAPQS 227 (264)
T ss_dssp -HHHHHHHHCSSEEEEEEEECCC-----------------------CCCHHHHHHHHHHHHHSCTT
T ss_pred -HHHHHHHhCCCCEEEEEecCCCcCcccccccchhHHHHHHhhhccCCCHHHHHHHHHHHhcCCcc
Confidence 11111111 38999999999965332110 000000 001112247899999999999987764
|
| >3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.69 E-value=1.5e-16 Score=144.18 Aligned_cols=191 Identities=13% Similarity=0.119 Sum_probs=129.5
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCC---eEEEEEcCcchhhhh-------c-CCCcEEeecCCCCHHHHHHHhc----
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRT---RIKALVKDKRNAMES-------F-GTYVESMAGDASNKKFLKTALR---- 161 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~---~V~~~~R~~~~~~~~-------~-~~~v~~v~~D~~d~~~~~~~~~---- 161 (305)
.+|++|||||+|+||++++++|+++|+ +|+++.|+.+...+. . +.++.++.+|++|.++++++++
T Consensus 32 ~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 111 (287)
T 3rku_A 32 AKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENLPQ 111 (287)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTSCG
T ss_pred CCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 458999999999999999999999987 999999997663321 1 3468899999999988888775
Q ss_pred ---CccEEEECCcc-----h----------------------Hhh----hhhhcCCCEEEEEcccccccCCCCcccccch
Q 021928 162 ---GVRSIICPSEG-----F----------------------ISN----AGSLKGVQHVILLSQLSVYRGSGGIQALMKG 207 (305)
Q Consensus 162 ---~~d~Vi~~~~g-----~----------------------~~~----~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~ 207 (305)
++|++|++++. . +.. ..++.+..+||++||..++.+......|..+
T Consensus 112 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~~~~Y~as 191 (287)
T 3rku_A 112 EFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGRDAYPTGSIYCAS 191 (287)
T ss_dssp GGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHHHHH
T ss_pred hcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECChhhcCCCCCCchHHHH
Confidence 57999987431 0 111 1244667899999999888766665556544
Q ss_pred HHH--HHHHHHHHHHHhCCCCEEEEecCCcccCCC----CCcceeeecCCCCCCccCHHHHHHHHHHHhhCCCC--CCcE
Q 021928 208 NAR--KLAEQDESMLMASGIPYTIIRTGVLQNTPG----GKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQ--TGLI 279 (305)
Q Consensus 208 ~~~--~~~~~aE~~l~~~gi~~tilRPg~l~~~~~----~~~~~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~~--~~~~ 279 (305)
+.. .+.+.....+...+++++.|+||++..... ................++++|||++++.++.++.. .+++
T Consensus 192 Kaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~~pedvA~~v~~l~s~~~~~i~g~~ 271 (287)
T 3rku_A 192 KFAVGAFTDSLRKELINTKIRVILIAPGLVETEFSLVRYRGNEEQAKNVYKDTTPLMADDVADLIVYATSRKQNTVIADT 271 (287)
T ss_dssp HHHHHHHHHHHHHHTTTSSCEEEEEEESCEESSHHHHHTTTCHHHHHHHHTTSCCEEHHHHHHHHHHHHTSCTTEEEEEE
T ss_pred HHHHHHHHHHHHHHhhhcCCEEEEEeCCcCcCccccccccCcHHHHHHhhcccCCCCHHHHHHHHHHHhCCCCCeEecce
Confidence 321 111222222345799999999999653321 00000000000112345899999999999987653 4788
Q ss_pred EEEecCCc
Q 021928 280 FEVVNGEE 287 (305)
Q Consensus 280 ~~v~~g~~ 287 (305)
+.+.+|+.
T Consensus 272 i~v~~g~~ 279 (287)
T 3rku_A 272 LIFPTNQA 279 (287)
T ss_dssp EEEETTEE
T ss_pred EEeeCCCC
Confidence 88887764
|
| >4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=99.68 E-value=2.1e-16 Score=139.30 Aligned_cols=186 Identities=13% Similarity=0.092 Sum_probs=126.4
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHh-CCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhc-----CccEEEECC
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIV-KRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR-----GVRSIICPS 170 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~-~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~-----~~d~Vi~~~ 170 (305)
.+|++|||||+|+||++++++|++ .|++|+++.|+++.. ...+.++.+|++|.+++.++++ ++|++|+++
T Consensus 3 ~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~~----~~~~~~~~~Dv~~~~~v~~~~~~~~~~~id~lv~nA 78 (244)
T 4e4y_A 3 AMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFS----AENLKFIKADLTKQQDITNVLDIIKNVSFDGIFLNA 78 (244)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCCC----CTTEEEEECCTTCHHHHHHHHHHTTTCCEEEEEECC
T ss_pred CCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEeccccccc----cccceEEecCcCCHHHHHHHHHHHHhCCCCEEEECC
Confidence 458999999999999999999999 789999998886522 2357899999999999988876 689999884
Q ss_pred cc----h----------------------Hhhhhhhc--CCCEEEEEcccccccCCCCcccccchHHH--HHHHHHHHHH
Q 021928 171 EG----F----------------------ISNAGSLK--GVQHVILLSQLSVYRGSGGIQALMKGNAR--KLAEQDESML 220 (305)
Q Consensus 171 ~g----~----------------------~~~~a~~~--gv~~~V~iSS~~~~~~~~~~~~~~~~~~~--~~~~~aE~~l 220 (305)
+. . +..++... .-.+||++||..++.+......|..++.. .+.+.....+
T Consensus 79 g~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~ 158 (244)
T 4e4y_A 79 GILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVGASIVFNGSDQCFIAKPNSFAYTLSKGAIAQMTKSLALDL 158 (244)
T ss_dssp CCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEEEEEEEECCGGGTCCCTTBHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccCcEEEEECCHHHccCCCCCchhHHHHHHHHHHHHHHHHHH
Confidence 31 0 11111111 11489999999888776666566544321 1122222334
Q ss_pred HhCCCCEEEEecCCcccCCCCC---------------cceeeecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEEEEe
Q 021928 221 MASGIPYTIIRTGVLQNTPGGK---------------QGFQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVV 283 (305)
Q Consensus 221 ~~~gi~~tilRPg~l~~~~~~~---------------~~~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~v~ 283 (305)
...+++++.|+||++....... .............+.+++|+|++++.++.++. ..|+.+++.
T Consensus 159 ~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~~~~~itG~~i~vd 238 (244)
T 4e4y_A 159 AKYQIRVNTVCPGTVDTDLYRNLIQKYANNVGISFDEAQKQEEKEFPLNRIAQPQEIAELVIFLLSDKSKFMTGGLIPID 238 (244)
T ss_dssp GGGTCEEEEEEESCBCCHHHHHHHHHHHHHHTCCHHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred HHcCeEEEEEecCccCchhhHHHHHhhhhhcCCCHHHHHHHHhhcCCCCCCcCHHHHHHHHHHHhcCccccccCCeEeEC
Confidence 5679999999999964321100 00001112233457899999999999997544 468999998
Q ss_pred cCC
Q 021928 284 NGE 286 (305)
Q Consensus 284 ~g~ 286 (305)
+|.
T Consensus 239 GG~ 241 (244)
T 4e4y_A 239 GGY 241 (244)
T ss_dssp TTG
T ss_pred CCc
Confidence 774
|
| >3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} | Back alignment and structure |
|---|
Probab=99.68 E-value=5.2e-16 Score=138.55 Aligned_cols=194 Identities=14% Similarity=0.099 Sum_probs=124.9
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcch---hhh------hcCCCcEEeecCCCCHHHHHHHhc----
Q 021928 95 PEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN---AME------SFGTYVESMAGDASNKKFLKTALR---- 161 (305)
Q Consensus 95 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~---~~~------~~~~~v~~v~~D~~d~~~~~~~~~---- 161 (305)
+..+++++||||+++||++++++|+++|++|+++.|.... ..+ ..+.++.++.+|++|.++++++++
T Consensus 8 ~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 87 (262)
T 3ksu_A 8 DLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAEK 87 (262)
T ss_dssp CCTTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence 3456999999999999999999999999999999876432 111 124568899999999998887775
Q ss_pred ---CccEEEECCcc----h----------------------Hhhhhhh--cCCCEEEEEcccccccCCCCcccccchHH-
Q 021928 162 ---GVRSIICPSEG----F----------------------ISNAGSL--KGVQHVILLSQLSVYRGSGGIQALMKGNA- 209 (305)
Q Consensus 162 ---~~d~Vi~~~~g----~----------------------~~~~a~~--~gv~~~V~iSS~~~~~~~~~~~~~~~~~~- 209 (305)
++|++|++++. . +..++.. .+..+||++||..++.+......|..++.
T Consensus 88 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~~~~~Y~asKaa 167 (262)
T 3ksu_A 88 EFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIATSLLAAYTGFYSTYAGNKAP 167 (262)
T ss_dssp HHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECCCHHHHHHCCCCC-----CH
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEechhhccCCCCCchhHHHHHH
Confidence 68999988441 0 1111111 13468999999877765544555554332
Q ss_pred -HHHHHHHHHHHHhCCCCEEEEecCCcccCC----CCCcc-eeeecCCCCCCccCHHHHHHHHHHHhhCCC-CCCcEEEE
Q 021928 210 -RKLAEQDESMLMASGIPYTIIRTGVLQNTP----GGKQG-FQFEEGCAANGSLSKEDAAFICVEALESIP-QTGLIFEV 282 (305)
Q Consensus 210 -~~~~~~aE~~l~~~gi~~tilRPg~l~~~~----~~~~~-~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~-~~~~~~~v 282 (305)
..+.+.....+...++.+..|+||++.... ..... ..+........+.+++|+|++++.++.+.. ..|+.+++
T Consensus 168 ~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~~L~s~~~~itG~~i~v 247 (262)
T 3ksu_A 168 VEHYTRAASKELMKQQISVNAIAPGPMDTSFFYGQETKESTAFHKSQAMGNQLTKIEDIAPIIKFLTTDGWWINGQTIFA 247 (262)
T ss_dssp HHHHHHHHHHHTTTTTCEEEEEEECCCCTHHHHTCC------------CCCCSCCGGGTHHHHHHHHTTTTTCCSCEEEE
T ss_pred HHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccCchHHHHHHHhcCcccCCCCHHHHHHHHHHHcCCCCCccCCEEEE
Confidence 222222223344578999999999964211 11110 111111222456788999999999997622 46899999
Q ss_pred ecCCcC
Q 021928 283 VNGEEK 288 (305)
Q Consensus 283 ~~g~~s 288 (305)
.+|...
T Consensus 248 dGg~~~ 253 (262)
T 3ksu_A 248 NGGYTT 253 (262)
T ss_dssp STTCCC
T ss_pred CCCccC
Confidence 988653
|
| >3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=99.68 E-value=4.5e-16 Score=142.85 Aligned_cols=191 Identities=13% Similarity=0.074 Sum_probs=128.1
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCc------------chhh------hhcCCCcEEeecCCCCHHHHH
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK------------RNAM------ESFGTYVESMAGDASNKKFLK 157 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~------------~~~~------~~~~~~v~~v~~D~~d~~~~~ 157 (305)
..+|++|||||+|+||++++++|+++|++|++++|+. +... ...+.++.++.+|++|.++++
T Consensus 44 l~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~ 123 (317)
T 3oec_A 44 LQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLASLQ 123 (317)
T ss_dssp TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHH
Confidence 3568999999999999999999999999999998762 2111 123457899999999998888
Q ss_pred HHhc-------CccEEEECCcc----h----------------------Hhh----hhhhcC-CCEEEEEcccccccCCC
Q 021928 158 TALR-------GVRSIICPSEG----F----------------------ISN----AGSLKG-VQHVILLSQLSVYRGSG 199 (305)
Q Consensus 158 ~~~~-------~~d~Vi~~~~g----~----------------------~~~----~a~~~g-v~~~V~iSS~~~~~~~~ 199 (305)
++++ .+|++|++++. . +.. ...+.+ -.+||++||..++.+..
T Consensus 124 ~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~ 203 (317)
T 3oec_A 124 AVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLRGAP 203 (317)
T ss_dssp HHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEECCGGGSSCCT
T ss_pred HHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEECcHHhcCCCC
Confidence 7775 78999988431 0 111 122222 46899999998887666
Q ss_pred CcccccchHHH--HHHHHHHHHHHhCCCCEEEEecCCcccCCC------------CCcce------ee-ecCCCCCCccC
Q 021928 200 GIQALMKGNAR--KLAEQDESMLMASGIPYTIIRTGVLQNTPG------------GKQGF------QF-EEGCAANGSLS 258 (305)
Q Consensus 200 ~~~~~~~~~~~--~~~~~aE~~l~~~gi~~tilRPg~l~~~~~------------~~~~~------~~-~~~~~~~~~Is 258 (305)
....|..++.. .+.+.....+...++.++.|+||++..... ..... .+ ........+++
T Consensus 204 ~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 283 (317)
T 3oec_A 204 GQSHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEMALNEKLLKMFLPHLENPTREDAAELFSQLTLLPIPWVE 283 (317)
T ss_dssp TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHCHHHHHHHCTTCSSCCHHHHHHHHTTTCSSSSSSBC
T ss_pred CCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCccccchhhhhhhhhhccccchhHHHHHHhhhccCCCCCCC
Confidence 66566544321 122222233455799999999999643210 00000 00 01111246789
Q ss_pred HHHHHHHHHHHhhCCC--CCCcEEEEecCC
Q 021928 259 KEDAAFICVEALESIP--QTGLIFEVVNGE 286 (305)
Q Consensus 259 ~~DvA~~iv~~l~~~~--~~~~~~~v~~g~ 286 (305)
++|||++++.++.... ..|++++|.+|.
T Consensus 284 pedvA~av~fL~s~~a~~itG~~i~vdGG~ 313 (317)
T 3oec_A 284 PEDVSNAVAWLASDEARYIHGAAIPVDGGQ 313 (317)
T ss_dssp HHHHHHHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred HHHHHHHHHHHcCCcccCCCCCEEEECcch
Confidence 9999999999986543 468999999875
|
| >3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A | Back alignment and structure |
|---|
Probab=99.68 E-value=2.6e-16 Score=139.62 Aligned_cols=187 Identities=10% Similarity=0.075 Sum_probs=126.4
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh-------cCCCcEEeecCC--CCHHHHHHHhc-----
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------FGTYVESMAGDA--SNKKFLKTALR----- 161 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~-------~~~~v~~v~~D~--~d~~~~~~~~~----- 161 (305)
..+|+++||||+|+||++++++|+++|++|++++|++++..+. ....+.++.+|+ +|.+++.++++
T Consensus 10 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 89 (252)
T 3f1l_A 10 LNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIAVN 89 (252)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHHHh
Confidence 3469999999999999999999999999999999997663321 223688999999 88888777665
Q ss_pred --CccEEEECCcc-----h----------------------Hhh----hhhhcCCCEEEEEcccccccCCCCcccccchH
Q 021928 162 --GVRSIICPSEG-----F----------------------ISN----AGSLKGVQHVILLSQLSVYRGSGGIQALMKGN 208 (305)
Q Consensus 162 --~~d~Vi~~~~g-----~----------------------~~~----~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~ 208 (305)
.+|++|++++. . +.. ..++.+..+||++||..++.+......|..++
T Consensus 90 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK 169 (252)
T 3f1l_A 90 YPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASK 169 (252)
T ss_dssp CSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred CCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCCCCEEEEECChhhccCCCCCchhHHHH
Confidence 68999988431 0 111 12446678999999998877666655565433
Q ss_pred HHH--HHHHHHHHHHhCCCCEEEEecCCcccCCCCCcceeeecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEEEEec
Q 021928 209 ARK--LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVN 284 (305)
Q Consensus 209 ~~~--~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~~~~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~v~~ 284 (305)
..- +.+.....+. ..+.++.|.||++....... . . .......+.+++|+|.+++.++.+.. ..|+.+++.+
T Consensus 170 ~a~~~l~~~la~e~~-~~irvn~v~PG~v~t~~~~~--~-~-~~~~~~~~~~p~dva~~~~~L~s~~~~~itG~~i~vdg 244 (252)
T 3f1l_A 170 FATEGMMQVLADEYQ-QRLRVNCINPGGTRTAMRAS--A-F-PTEDPQKLKTPADIMPLYLWLMGDDSRRKTGMTFDAQP 244 (252)
T ss_dssp HHHHHHHHHHHHHTT-TTCEEEEEECCSBSSHHHHH--H-C-TTCCGGGSBCTGGGHHHHHHHHSGGGTTCCSCEEESSC
T ss_pred HHHHHHHHHHHHHhc-CCcEEEEEecCcccCchhhh--h-C-CccchhccCCHHHHHHHHHHHcCccccCCCCCEEEeCC
Confidence 211 1111111122 23899999999964321100 0 0 11122346788999999999997644 4689999998
Q ss_pred CCc
Q 021928 285 GEE 287 (305)
Q Consensus 285 g~~ 287 (305)
|..
T Consensus 245 G~~ 247 (252)
T 3f1l_A 245 GRK 247 (252)
T ss_dssp C--
T ss_pred CcC
Confidence 864
|
| >4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=99.68 E-value=1.5e-16 Score=143.21 Aligned_cols=190 Identities=12% Similarity=0.085 Sum_probs=129.3
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh------cCCCcEEeecCCCCHHHHHHHhc------Cc
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR------GV 163 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~~~v~~v~~D~~d~~~~~~~~~------~~ 163 (305)
..+|+++||||+|+||++++++|+++|++|++++|++++..+. .+.++.++.+|++|.+++.++++ ++
T Consensus 31 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~g~i 110 (275)
T 4imr_A 31 LRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEAIAPV 110 (275)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHHHSCC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHhCCC
Confidence 3569999999999999999999999999999999987663321 24578999999999888777665 78
Q ss_pred cEEEECCcc----h----------------------Hh----hhhhhcCCCEEEEEcccccccCCCCcccccchHH--HH
Q 021928 164 RSIICPSEG----F----------------------IS----NAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA--RK 211 (305)
Q Consensus 164 d~Vi~~~~g----~----------------------~~----~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~--~~ 211 (305)
|++|++++. . +. ...++.+..+||++||..++.+......|..++. ..
T Consensus 111 D~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~ 190 (275)
T 4imr_A 111 DILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARKWGRVVSIGSINQLRPKSVVTAYAATKAAQHN 190 (275)
T ss_dssp CEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHH
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCCCCchhhHHHHHHHHH
Confidence 999988441 0 11 1124456789999999988775555444544332 11
Q ss_pred HHHHHHHHHHhCCCCEEEEecCCcccCCCCC-----cce--eeecCC-CCCCccCHHHHHHHHHHHhhCCC--CCCcEEE
Q 021928 212 LAEQDESMLMASGIPYTIIRTGVLQNTPGGK-----QGF--QFEEGC-AANGSLSKEDAAFICVEALESIP--QTGLIFE 281 (305)
Q Consensus 212 ~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~-----~~~--~~~~~~-~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~ 281 (305)
+.+.....+...++.++.|+||++....... ... .+.... ....+.+++|+|++++.++.+.. ..|++++
T Consensus 191 l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~fL~s~~a~~itG~~i~ 270 (275)
T 4imr_A 191 LIQSQARDFAGDNVLLNTLAPGLVDTDRNADRRAQDPEGWDEYVRTLNWMGRAGRPEEMVGAALFLASEACSFMTGETIF 270 (275)
T ss_dssp HHHHHHHHHGGGTEEEEEEEESSBCSHHHHHHHHHCHHHHHHHHHHHSTTCSCBCGGGGHHHHHHHHSGGGTTCCSCEEE
T ss_pred HHHHHHHHhcccCcEEEEEEeccccCcccccccccChHHHHHHHhhcCccCCCcCHHHHHHHHHHHcCcccCCCCCCEEE
Confidence 2222223345579999999999964321100 000 000000 22345688999999999997543 4689999
Q ss_pred EecC
Q 021928 282 VVNG 285 (305)
Q Consensus 282 v~~g 285 (305)
|.+|
T Consensus 271 vdGG 274 (275)
T 4imr_A 271 LTGG 274 (275)
T ss_dssp ESSC
T ss_pred eCCC
Confidence 9876
|
| >1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.68 E-value=3.6e-16 Score=140.19 Aligned_cols=189 Identities=14% Similarity=0.071 Sum_probs=126.4
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhc--CCCcEEeecCCCCHHHHHHHhc-------CccEEE
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF--GTYVESMAGDASNKKFLKTALR-------GVRSII 167 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~--~~~v~~v~~D~~d~~~~~~~~~-------~~d~Vi 167 (305)
.+|+++||||+|+||++++++|+++|++|++++|++++..+.. -.++.++.+|++|.++++++++ ++|++|
T Consensus 8 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv 87 (270)
T 1yde_A 8 AGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDCVV 87 (270)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCeEEEcCCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 4589999999999999999999999999999999976543221 1247899999999988887765 689999
Q ss_pred ECCc-----ch----------------------Hhhhh----hhcCCCEEEEEcccccccCCCCcccccchHH--HHHHH
Q 021928 168 CPSE-----GF----------------------ISNAG----SLKGVQHVILLSQLSVYRGSGGIQALMKGNA--RKLAE 214 (305)
Q Consensus 168 ~~~~-----g~----------------------~~~~a----~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~--~~~~~ 214 (305)
|+++ .. +..++ ++ +.++||++||..+..+......|..++. ..+.+
T Consensus 88 ~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~ 166 (270)
T 1yde_A 88 NNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRK-SQGNVINISSLVGAIGQAQAVPYVATKGAVTAMTK 166 (270)
T ss_dssp ECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH-HTCEEEEECCHHHHHCCTTCHHHHHHHHHHHHHHH
T ss_pred ECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH-CCCEEEEEcCccccCCCCCCcccHHHHHHHHHHHH
Confidence 8832 10 01111 12 2479999999877655544445544332 11122
Q ss_pred HHHHHHHhCCCCEEEEecCCcccCCC------CCcc-eee---ecCCCCCCccCHHHHHHHHHHHhhCCC-CCCcEEEEe
Q 021928 215 QDESMLMASGIPYTIIRTGVLQNTPG------GKQG-FQF---EEGCAANGSLSKEDAAFICVEALESIP-QTGLIFEVV 283 (305)
Q Consensus 215 ~aE~~l~~~gi~~tilRPg~l~~~~~------~~~~-~~~---~~~~~~~~~Is~~DvA~~iv~~l~~~~-~~~~~~~v~ 283 (305)
.....+...++++++|+||++..... .... ..+ ........+.+++|+|++++.++.+.. ..|+++.+.
T Consensus 167 ~la~e~~~~gi~vn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v~~L~s~~~~itG~~i~vd 246 (270)
T 1yde_A 167 ALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPLGRMGQPAEVGAAAVFLASEANFCTGIELLVT 246 (270)
T ss_dssp HHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHHHCTTCCSCEEEES
T ss_pred HHHHHhhhhCcEEEEEEeCccccchhhhhhhcccchHHHHHHHhhcCCCCCCcCHHHHHHHHHHHcccCCCcCCCEEEEC
Confidence 22233455799999999999643210 0000 000 011122345789999999999987533 468999999
Q ss_pred cCC
Q 021928 284 NGE 286 (305)
Q Consensus 284 ~g~ 286 (305)
+|.
T Consensus 247 GG~ 249 (270)
T 1yde_A 247 GGA 249 (270)
T ss_dssp TTT
T ss_pred CCe
Confidence 875
|
| >4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.68 E-value=1.3e-15 Score=137.45 Aligned_cols=179 Identities=12% Similarity=0.043 Sum_probs=119.2
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh-------cCCCcEEeecCCCCHHHHHHHhc-------C
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------FGTYVESMAGDASNKKFLKTALR-------G 162 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~-------~~~~v~~v~~D~~d~~~~~~~~~-------~ 162 (305)
.+|++|||||+|+||++++++|+++|++|++++|++++..+. .+..+.++.+|++|.+++.++++ .
T Consensus 32 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 111 (281)
T 4dry_A 32 EGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAEFAR 111 (281)
T ss_dssp --CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 459999999999999999999999999999999997653321 12235899999999988877765 5
Q ss_pred ccEEEECCcc-----h--------------------------HhhhhhhcC--CCEEEEEcccccccCCCCcccccchHH
Q 021928 163 VRSIICPSEG-----F--------------------------ISNAGSLKG--VQHVILLSQLSVYRGSGGIQALMKGNA 209 (305)
Q Consensus 163 ~d~Vi~~~~g-----~--------------------------~~~~a~~~g--v~~~V~iSS~~~~~~~~~~~~~~~~~~ 209 (305)
+|++|++++. . .....++.+ ..+||++||..++.+..+...|..++.
T Consensus 112 iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~asKa 191 (281)
T 4dry_A 112 LDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQTPRPNSAPYTATKH 191 (281)
T ss_dssp CSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGTCCCTTCHHHHHHHH
T ss_pred CCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhCCCCCCChhHHHHHH
Confidence 7999988431 0 011122232 569999999988877666666655432
Q ss_pred H--HHHHHHHHHHHhCCCCEEEEecCCcccCCCCC-cceeee-cC-CCCCCccCHHHHHHHHHHHhhCCCC
Q 021928 210 R--KLAEQDESMLMASGIPYTIIRTGVLQNTPGGK-QGFQFE-EG-CAANGSLSKEDAAFICVEALESIPQ 275 (305)
Q Consensus 210 ~--~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~-~~~~~~-~~-~~~~~~Is~~DvA~~iv~~l~~~~~ 275 (305)
. .+.+.....+...++.++.|+||++....... ...... .. .....+++++|+|++++.++.++..
T Consensus 192 a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~fL~s~~~~ 262 (281)
T 4dry_A 192 AITGLTKSTALDGRMHDIACGQIDIGNAATDMTARMSTGVLQANGEVAAEPTIPIEHIAEAVVYMASLPLS 262 (281)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEEECBCC-------CEEECTTSCEEECCCBCHHHHHHHHHHHHHSCTT
T ss_pred HHHHHHHHHHHHhcccCeEEEEEEECcCcChhhhhhcchhhhhhhcccccCCCCHHHHHHHHHHHhCCCcc
Confidence 1 12222223345689999999999965332211 000000 00 1123578999999999999998765
|
| >3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} | Back alignment and structure |
|---|
Probab=99.68 E-value=3.6e-16 Score=138.59 Aligned_cols=181 Identities=13% Similarity=0.116 Sum_probs=121.8
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhc-------CccEEE
Q 021928 95 PEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR-------GVRSII 167 (305)
Q Consensus 95 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~-------~~d~Vi 167 (305)
..++|+|+||||+|+||++++++|+++|++|++++|++++.. ...+.+|++|.+++.++++ .+|+||
T Consensus 19 ~~m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~------~~~~~~d~~d~~~v~~~~~~~~~~~g~iD~li 92 (251)
T 3orf_A 19 SHMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNA------DHSFTIKDSGEEEIKSVIEKINSKSIKVDTFV 92 (251)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTS------SEEEECSCSSHHHHHHHHHHHHTTTCCEEEEE
T ss_pred cccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc------ccceEEEeCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 456789999999999999999999999999999999986543 2457889999888877765 459999
Q ss_pred ECCcc------h---------------------Hhhhhhhc--CCCEEEEEcccccccCCCCcccccchHHHHHHHHHHH
Q 021928 168 CPSEG------F---------------------ISNAGSLK--GVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDES 218 (305)
Q Consensus 168 ~~~~g------~---------------------~~~~a~~~--gv~~~V~iSS~~~~~~~~~~~~~~~~~~~~~~~~aE~ 218 (305)
++++. . +..++... .-.+||++||..++.+......|..++..... .++.
T Consensus 93 ~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaa~~~-~~~~ 171 (251)
T 3orf_A 93 CAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGASAALNRTSGMIAYGATKAATHH-IIKD 171 (251)
T ss_dssp ECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTTBHHHHHHHHHHHH-HHHH
T ss_pred ECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEechhhccCCCCCchhHHHHHHHHH-HHHH
Confidence 88431 0 11111111 12489999999888766555555443321100 1111
Q ss_pred HHH-----hCCCCEEEEecCCcccCCCCCcceeeecCCCCCCccCHHHHHHHHHHHhhC---CCCCCcEEEEecCC
Q 021928 219 MLM-----ASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALES---IPQTGLIFEVVNGE 286 (305)
Q Consensus 219 ~l~-----~~gi~~tilRPg~l~~~~~~~~~~~~~~~~~~~~~Is~~DvA~~iv~~l~~---~~~~~~~~~v~~g~ 286 (305)
+-+ ..+++++.|+||++...... . .........+++++|+|++++.++.+ ....|+.+++.+++
T Consensus 172 la~e~~~~~~gi~v~~v~PG~v~t~~~~--~--~~~~~~~~~~~~~~dva~~i~~l~~~~~~~~~tG~~i~v~~g~ 243 (251)
T 3orf_A 172 LASENGGLPAGSTSLGILPVTLDTPTNR--K--YMSDANFDDWTPLSEVAEKLFEWSTNSDSRPTNGSLVKFETKS 243 (251)
T ss_dssp HTSTTSSSCTTCEEEEEEESCBCCHHHH--H--HCTTSCGGGSBCHHHHHHHHHHHHHCGGGCCCTTCEEEEEEET
T ss_pred HHHHhcccCCCcEEEEEecCcCcCcchh--h--hcccccccccCCHHHHHHHHHHHhcCccccCCcceEEEEecCC
Confidence 111 35899999999996432110 0 01112334678999999999999988 34578999998765
|
| >3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=99.68 E-value=3.3e-16 Score=138.05 Aligned_cols=185 Identities=14% Similarity=0.046 Sum_probs=108.9
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcC-CCcEEeecCCCCHHHHH---HH---hcCccEEEEC
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG-TYVESMAGDASNKKFLK---TA---LRGVRSIICP 169 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~-~~v~~v~~D~~d~~~~~---~~---~~~~d~Vi~~ 169 (305)
.+|+|+||||+|+||++++++|++ |++|+++.|+++...+... .++.++.+|+.+.+... +. +.++|++|++
T Consensus 4 ~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id~lv~~ 82 (245)
T 3e9n_A 4 KKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALAEIEGVEPIESDIVKEVLEEGGVDKLKNLDHVDTLVHA 82 (245)
T ss_dssp --CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHHTSTTEEEEECCHHHHHHTSSSCGGGTTCSCCSEEEEC
T ss_pred CCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHhhcCCcceecccchHHHHHHHHHHHHhcCCCCEEEEC
Confidence 458999999999999999999987 9999999999876443322 46889999998865421 12 2368999988
Q ss_pred Ccch--------------------------Hh----hhhhhcCCCEEEEEcccccccCCCCcccccchHHH--HHHHHHH
Q 021928 170 SEGF--------------------------IS----NAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--KLAEQDE 217 (305)
Q Consensus 170 ~~g~--------------------------~~----~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~--~~~~~aE 217 (305)
++.. +. ...++.+ .+||++||..++.+......|..++.. .+.+...
T Consensus 83 Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la 161 (245)
T 3e9n_A 83 AAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAAS-GCVIYINSGAGNGPHPGNTIYAASKHALRGLADAFR 161 (245)
T ss_dssp C----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEC----------CHHHHHHHHHHHHHHHHHH
T ss_pred CCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEcCcccccCCCCchHHHHHHHHHHHHHHHHH
Confidence 4310 01 1122334 799999999888766655556544321 1112222
Q ss_pred HHHHhCCCCEEEEecCCcccCCCCCcceeeecCCCCCCccCHHHHHHHHHHHhhCCCCCCcEEEEec
Q 021928 218 SMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVVN 284 (305)
Q Consensus 218 ~~l~~~gi~~tilRPg~l~~~~~~~~~~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~~~~~~~~v~~ 284 (305)
..+...+++++.++||++....................+++++|+|++++.+++.+. .+.++++.-
T Consensus 162 ~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~p~dvA~~i~~l~~~~~-~~~~~~i~~ 227 (245)
T 3e9n_A 162 KEEANNGIRVSTVSPGPTNTPMLQGLMDSQGTNFRPEIYIEPKEIANAIRFVIDAGE-TTQITNVDV 227 (245)
T ss_dssp HHHGGGTCEEEEEEECCC----------------CCGGGSCHHHHHHHHHHHHTSCT-TEEEEEEEE
T ss_pred HHhhhcCeEEEEEecCCccCchhhhhhhhhhcccccccCCCHHHHHHHHHHHHcCCC-ccceeeeEE
Confidence 234457899999999996543221100000111122457899999999999998665 456777764
|
| >3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A* | Back alignment and structure |
|---|
Probab=99.68 E-value=1.5e-15 Score=135.45 Aligned_cols=191 Identities=13% Similarity=0.042 Sum_probs=127.7
Q ss_pred CCCCEEEEEcCCCh--HHHHHHHHHHhCCCeEEEEEcCcchhh------hhcCC-CcEEeecCCCCHHHHHHHhc-----
Q 021928 96 EARDAVLVTDGDSD--IGQMVILSLIVKRTRIKALVKDKRNAM------ESFGT-YVESMAGDASNKKFLKTALR----- 161 (305)
Q Consensus 96 ~~~~~vlVtGatG~--iG~~l~~~L~~~g~~V~~~~R~~~~~~------~~~~~-~v~~v~~D~~d~~~~~~~~~----- 161 (305)
..+++++||||+|+ ||++++++|+++|++|+++.|+..... +..+. ++.++.+|++|.++++++++
T Consensus 5 l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 84 (266)
T 3oig_A 5 LEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKEQ 84 (266)
T ss_dssp CTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHHH
T ss_pred cCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHHH
Confidence 34689999999977 999999999999999999999864311 11233 68999999999888877665
Q ss_pred --CccEEEECCcc--------h----------------------Hhhhhhhc--CCCEEEEEcccccccCCCCcccccch
Q 021928 162 --GVRSIICPSEG--------F----------------------ISNAGSLK--GVQHVILLSQLSVYRGSGGIQALMKG 207 (305)
Q Consensus 162 --~~d~Vi~~~~g--------~----------------------~~~~a~~~--gv~~~V~iSS~~~~~~~~~~~~~~~~ 207 (305)
.+|++|++++. . +..++... .-.+||++||..++.+......|..+
T Consensus 85 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as 164 (266)
T 3oig_A 85 VGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYLGGELVMPNYNVMGVA 164 (266)
T ss_dssp HSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSCCTTTHHHHHH
T ss_pred hCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEecccccccCCCcchhHHH
Confidence 67999987321 0 11111111 23589999999888766555555544
Q ss_pred HH--HHHHHHHHHHHHhCCCCEEEEecCCcccCCCCC-cc---e--eeecCCCCCCccCHHHHHHHHHHHhhCCC--CCC
Q 021928 208 NA--RKLAEQDESMLMASGIPYTIIRTGVLQNTPGGK-QG---F--QFEEGCAANGSLSKEDAAFICVEALESIP--QTG 277 (305)
Q Consensus 208 ~~--~~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~-~~---~--~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~ 277 (305)
+. ..+.+.....+...++.++.|+||++....... .. . .+..........+++|+|++++.++.++. ..|
T Consensus 165 Kaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~p~dva~~v~~l~s~~~~~~tG 244 (266)
T 3oig_A 165 KASLDASVKYLAADLGKENIRVNSISAGPIRTLSAKGISDFNSILKDIEERAPLRRTTTPEEVGDTAAFLFSDMSRGITG 244 (266)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGGTTCCS
T ss_pred HHHHHHHHHHHHHHHhhcCcEEEEEecCcccccccccccchHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCCchhcCcC
Confidence 32 112222223345679999999999964322111 00 0 00011122456899999999999997543 568
Q ss_pred cEEEEecCC
Q 021928 278 LIFEVVNGE 286 (305)
Q Consensus 278 ~~~~v~~g~ 286 (305)
+.+++.+|-
T Consensus 245 ~~i~vdGG~ 253 (266)
T 3oig_A 245 ENLHVDSGF 253 (266)
T ss_dssp CEEEESTTG
T ss_pred CEEEECCCe
Confidence 999999875
|
| >4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A* | Back alignment and structure |
|---|
Probab=99.68 E-value=2.8e-15 Score=133.83 Aligned_cols=192 Identities=12% Similarity=0.080 Sum_probs=132.1
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhh-----hhcCCCcEEeecCCCCHHHHHHHhc-------C
Q 021928 95 PEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM-----ESFGTYVESMAGDASNKKFLKTALR-------G 162 (305)
Q Consensus 95 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~-----~~~~~~v~~v~~D~~d~~~~~~~~~-------~ 162 (305)
+..+|+++||||+++||++++++|++.|++|+++.|+.+... ...+.++.++.+|++|.++++++++ .
T Consensus 4 ~L~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~G~ 83 (258)
T 4gkb_A 4 NLQDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGAFLDALAQRQPRATYLPVELQDDAQCRDAVAQTIATFGR 83 (258)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHHHHHHHHhcCCCEEEEEeecCCHHHHHHHHHHHHHHhCC
Confidence 445799999999999999999999999999999999876521 1235678999999999887766553 6
Q ss_pred ccEEEECCcch-----------------------------HhhhhhhcCCCEEEEEcccccccCCCCcccccchHH--HH
Q 021928 163 VRSIICPSEGF-----------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA--RK 211 (305)
Q Consensus 163 ~d~Vi~~~~g~-----------------------------~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~--~~ 211 (305)
+|++|++++-. .....++.+ .+||.+||..+..+.+....|..++. ..
T Consensus 84 iDiLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-G~IVnisS~~~~~~~~~~~~Y~asKaav~~ 162 (258)
T 4gkb_A 84 LDGLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATR-GAIVNISSKTAVTGQGNTSGYCASKGAQLA 162 (258)
T ss_dssp CCEEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTHHHHCCSSCHHHHHHHHHHHH
T ss_pred CCEEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CeEEEEeehhhccCCCCchHHHHHHHHHHH
Confidence 79999874310 111123333 68999999988877666666655442 22
Q ss_pred HHHHHHHHHHhCCCCEEEEecCCcccCCCCCc-------cee---eecCCCC-CCccCHHHHHHHHHHHhhCCC--CCCc
Q 021928 212 LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQ-------GFQ---FEEGCAA-NGSLSKEDAAFICVEALESIP--QTGL 278 (305)
Q Consensus 212 ~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~~-------~~~---~~~~~~~-~~~Is~~DvA~~iv~~l~~~~--~~~~ 278 (305)
+.+.....+...||++..|.||++........ ... +....+. .-+-.++|||.+++.++.+.. -.|+
T Consensus 163 ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~plg~R~g~peeiA~~v~fLaS~~a~~iTG~ 242 (258)
T 4gkb_A 163 LTREWAVALREHGVRVNAVIPAEVMTPLYRNWIATFEDPEAKLAEIAAKVPLGRRFTTPDEIADTAVFLLSPRASHTTGE 242 (258)
T ss_dssp HHHHHHHHHGGGTCEEEEEEECSBCCSCC-----------CHHHHHHTTCTTTTSCBCHHHHHHHHHHHHSGGGTTCCSC
T ss_pred HHHHHHHHhcccCeEEEEEecCCCCChhHhhhhhcccChHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHhCchhcCccCC
Confidence 33334445667899999999999643221100 000 0011111 245688999999999996543 4789
Q ss_pred EEEEecCCc
Q 021928 279 IFEVVNGEE 287 (305)
Q Consensus 279 ~~~v~~g~~ 287 (305)
++.|.+|-.
T Consensus 243 ~i~VDGG~T 251 (258)
T 4gkb_A 243 WLFVDGGYT 251 (258)
T ss_dssp EEEESTTTT
T ss_pred eEEECCCcc
Confidence 999998753
|
| >3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.68 E-value=1.5e-15 Score=136.63 Aligned_cols=191 Identities=14% Similarity=0.076 Sum_probs=123.5
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCc------------chhh------hhcCCCcEEeecCCCCHHHHH
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK------------RNAM------ESFGTYVESMAGDASNKKFLK 157 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~------------~~~~------~~~~~~v~~v~~D~~d~~~~~ 157 (305)
..+|+||||||+|+||++++++|+++|++|++++|+. +... ...+.++.++.+|++|.+++.
T Consensus 8 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~ 87 (287)
T 3pxx_A 8 VQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAVS 87 (287)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHH
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHHHH
Confidence 3468999999999999999999999999999999872 2211 123457899999999998888
Q ss_pred HHhc-------CccEEEECCcch------------------------Hhhhhhh--cCCCEEEEEcccccccCC------
Q 021928 158 TALR-------GVRSIICPSEGF------------------------ISNAGSL--KGVQHVILLSQLSVYRGS------ 198 (305)
Q Consensus 158 ~~~~-------~~d~Vi~~~~g~------------------------~~~~a~~--~gv~~~V~iSS~~~~~~~------ 198 (305)
++++ ++|++||+++.. +..++.. .+-.+||++||..++.+.
T Consensus 88 ~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~ 167 (287)
T 3pxx_A 88 RELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGSVAGLIAAAQPPGA 167 (287)
T ss_dssp HHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCHHHHHHHHCCC--
T ss_pred HHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEeccchhcccccccccc
Confidence 7775 789999884310 1111211 234589999998766432
Q ss_pred -----CCcccccchHH--HHHHHHHHHHHHhCCCCEEEEecCCcccCCCCCc------------cee-------eecCCC
Q 021928 199 -----GGIQALMKGNA--RKLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQ------------GFQ-------FEEGCA 252 (305)
Q Consensus 199 -----~~~~~~~~~~~--~~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~~------------~~~-------~~~~~~ 252 (305)
.....|..++. ..+.+.....+...+++++.|+||++........ ... ......
T Consensus 168 ~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (287)
T 3pxx_A 168 GGPQGPGGAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSAPMYRQFRPDLEAPSRADALLAFPAMQAM 247 (287)
T ss_dssp ---CHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESSBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHGGGGCSS
T ss_pred cccCCCccchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccccccccccchhhhhccccccchhHHHHhhhhhhccc
Confidence 11222322221 1111112222345699999999999654322110 000 001111
Q ss_pred CCCccCHHHHHHHHHHHhhCCC--CCCcEEEEecCC
Q 021928 253 ANGSLSKEDAAFICVEALESIP--QTGLIFEVVNGE 286 (305)
Q Consensus 253 ~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~v~~g~ 286 (305)
...+.+++|+|++++.++.+.. ..|++++|.+|.
T Consensus 248 ~~~~~~p~dva~~v~fL~s~~a~~itG~~i~vdGG~ 283 (287)
T 3pxx_A 248 PTPYVEASDISNAVCFLASDESRYVTGLQFKVDAGA 283 (287)
T ss_dssp SCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred CCCCCCHHHHHhhHheecchhhcCCCCceEeECchh
Confidence 2567899999999999996543 468999999875
|
| >2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... | Back alignment and structure |
|---|
Probab=99.68 E-value=6e-16 Score=139.83 Aligned_cols=191 Identities=14% Similarity=0.098 Sum_probs=126.9
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCc-chhhh-------hcCCCcEEeecCCCC----HHHHHHHhc--
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK-RNAME-------SFGTYVESMAGDASN----KKFLKTALR-- 161 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~-~~~~~-------~~~~~v~~v~~D~~d----~~~~~~~~~-- 161 (305)
..+|+++||||+|+||++++++|+++|++|++++|++ ++..+ ..+.++.++.+|++| .+++.++++
T Consensus 21 l~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 100 (288)
T 2x9g_A 21 MEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEIINSC 100 (288)
T ss_dssp -CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHHHHH
Confidence 3468999999999999999999999999999999997 44221 224568899999999 888877665
Q ss_pred -----CccEEEECCcc----hH-----hh---------------------------h----hhhcC------CCEEEEEc
Q 021928 162 -----GVRSIICPSEG----FI-----SN---------------------------A----GSLKG------VQHVILLS 190 (305)
Q Consensus 162 -----~~d~Vi~~~~g----~~-----~~---------------------------~----a~~~g------v~~~V~iS 190 (305)
++|++|++++. .+ .+ + .++.+ ..+||++|
T Consensus 101 ~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iv~is 180 (288)
T 2x9g_A 101 FRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLC 180 (288)
T ss_dssp HHHHSCCCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--------CCCEEEEEEC
T ss_pred HHhcCCCCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCCCCCeEEEEEe
Confidence 78999987431 00 00 0 11223 56999999
Q ss_pred ccccccCCCCcccccchHHH--HHHHHHHHHHHhCCCCEEEEecCCcccCCCCCcce--eeecCCCCCCc-cCHHHHHHH
Q 021928 191 QLSVYRGSGGIQALMKGNAR--KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGF--QFEEGCAANGS-LSKEDAAFI 265 (305)
Q Consensus 191 S~~~~~~~~~~~~~~~~~~~--~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~~~~--~~~~~~~~~~~-Is~~DvA~~ 265 (305)
|..++.+......|..++.. .+.+.....+...+++++.|+||++.......... .+........+ .+++|+|++
T Consensus 181 S~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~p~~r~~~~pedvA~~ 260 (288)
T 2x9g_A 181 DAMVDQPCMAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPVAMGEEEKDKWRRKVPLGRREASAEQIADA 260 (288)
T ss_dssp CTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSCSCCTTSCHHHHHHHHHTCTTTSSCCCHHHHHHH
T ss_pred cccccCCCCCCchHHHHHHHHHHHHHHHHHHhhccCeEEEEEEeccccCccccChHHHHHHHhhCCCCCCCCCHHHHHHH
Confidence 99887765555556544321 12222223345679999999999965433111000 00011112234 799999999
Q ss_pred HHHHhhCCC--CCCcEEEEecCC
Q 021928 266 CVEALESIP--QTGLIFEVVNGE 286 (305)
Q Consensus 266 iv~~l~~~~--~~~~~~~v~~g~ 286 (305)
++.++.... ..|+.+.+.+|.
T Consensus 261 v~~l~s~~~~~itG~~i~vdGG~ 283 (288)
T 2x9g_A 261 VIFLVSGSAQYITGSIIKVDGGL 283 (288)
T ss_dssp HHHHHSGGGTTCCSCEEEESTTG
T ss_pred HHHHhCccccCccCCEEEECcch
Confidence 999997533 468899988774
|
| >3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.68 E-value=9.6e-16 Score=137.32 Aligned_cols=190 Identities=13% Similarity=0.044 Sum_probs=123.5
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcc-hhh------hhcCCCcEEeecCCCCHHHHHHHhc-------C
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR-NAM------ESFGTYVESMAGDASNKKFLKTALR-------G 162 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~-~~~------~~~~~~v~~v~~D~~d~~~~~~~~~-------~ 162 (305)
.+|+++||||+|+||++++++|+++|++|+++.++.. ... ...+.++.++.+|++|.++++++++ +
T Consensus 26 ~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 105 (267)
T 3u5t_A 26 TNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEAFGG 105 (267)
T ss_dssp -CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 4689999999999999999999999999998855433 321 1234578899999999988887775 6
Q ss_pred ccEEEECCcc----h----------------------Hhhhh-hh-cCCCEEEEEcccccccCCCCcccccchHHH--HH
Q 021928 163 VRSIICPSEG----F----------------------ISNAG-SL-KGVQHVILLSQLSVYRGSGGIQALMKGNAR--KL 212 (305)
Q Consensus 163 ~d~Vi~~~~g----~----------------------~~~~a-~~-~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~--~~ 212 (305)
+|++|++++. . +..++ .. ..-.+||++||..+..+......|..++.. .+
T Consensus 106 iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l 185 (267)
T 3u5t_A 106 VDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMSTSQVGLLHPSYGIYAAAKAGVEAM 185 (267)
T ss_dssp EEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCTHHHHCCTTCHHHHHHHHHHHHH
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeChhhccCCCCchHHHHHHHHHHHH
Confidence 8999988431 0 01111 11 112589999998877666555555543321 11
Q ss_pred HHHHHHHHHhCCCCEEEEecCCcccCCCCC---cc--eeeecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEEEEecC
Q 021928 213 AEQDESMLMASGIPYTIIRTGVLQNTPGGK---QG--FQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVNG 285 (305)
Q Consensus 213 ~~~aE~~l~~~gi~~tilRPg~l~~~~~~~---~~--~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~v~~g 285 (305)
.+.....+...+++++.|+||++....... .. ..+........+.+++|+|++++.++.... ..|+++++.+|
T Consensus 186 ~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG 265 (267)
T 3u5t_A 186 THVLSKELRGRDITVNAVAPGPTATDLFLEGKSDEVRDRFAKLAPLERLGTPQDIAGAVAFLAGPDGAWVNGQVLRANGG 265 (267)
T ss_dssp HHHHHHHTTTSCCEEEEEEECCBC-----------CHHHHHTSSTTCSCBCHHHHHHHHHHHHSTTTTTCCSEEEEESSS
T ss_pred HHHHHHHhhhhCCEEEEEEECCCcCccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccCCEEEeCCC
Confidence 122222233468999999999964332110 00 001112233456789999999999997544 36899999876
Q ss_pred C
Q 021928 286 E 286 (305)
Q Consensus 286 ~ 286 (305)
-
T Consensus 266 ~ 266 (267)
T 3u5t_A 266 I 266 (267)
T ss_dssp C
T ss_pred c
Confidence 3
|
| >2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=99.67 E-value=1.5e-15 Score=137.00 Aligned_cols=190 Identities=13% Similarity=0.006 Sum_probs=124.4
Q ss_pred CCCEEEEEcCC--ChHHHHHHHHHHhCCCeEEEEEcCcc---hhhhh--cCCCcEEeecCCCCHHHHHHHhc-------C
Q 021928 97 ARDAVLVTDGD--SDIGQMVILSLIVKRTRIKALVKDKR---NAMES--FGTYVESMAGDASNKKFLKTALR-------G 162 (305)
Q Consensus 97 ~~~~vlVtGat--G~iG~~l~~~L~~~g~~V~~~~R~~~---~~~~~--~~~~v~~v~~D~~d~~~~~~~~~-------~ 162 (305)
.+++|+||||+ |+||++++++|+++|++|++++|+++ ...+. ....+.++.+|++|.+++.++++ +
T Consensus 20 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 99 (285)
T 2p91_A 20 EGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLEKRVREIAKGFGSDLVVKCDVSLDEDIKNLKKFLEENWGS 99 (285)
T ss_dssp TTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTSC
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 45899999999 99999999999999999999999874 11111 11247889999999988887765 6
Q ss_pred ccEEEECCcc---------h---------------------Hhhhhhhc---CCCEEEEEcccccccCCCCcccccchHH
Q 021928 163 VRSIICPSEG---------F---------------------ISNAGSLK---GVQHVILLSQLSVYRGSGGIQALMKGNA 209 (305)
Q Consensus 163 ~d~Vi~~~~g---------~---------------------~~~~a~~~---gv~~~V~iSS~~~~~~~~~~~~~~~~~~ 209 (305)
+|++||+++. . +..++... .-.+||++||..++.+......|..++.
T Consensus 100 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~ 179 (285)
T 2p91_A 100 LDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGRNGAIVTLSYYGAEKVVPHYNVMGIAKA 179 (285)
T ss_dssp CCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTSCCEEEEEECGGGTSBCTTTTHHHHHHH
T ss_pred CCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCEEEEEccchhccCCCCccHHHHHHH
Confidence 8999988321 0 01111111 2379999999887765544444544332
Q ss_pred H--HHHHHHHHHHHhCCCCEEEEecCCcccCCCCCc-c--ee---eecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcE
Q 021928 210 R--KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQ-G--FQ---FEEGCAANGSLSKEDAAFICVEALESIP--QTGLI 279 (305)
Q Consensus 210 ~--~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~~-~--~~---~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~ 279 (305)
. .+.+.....+...+++++.|+||++........ . .. +........+.+++|+|++++.++.... ..|+.
T Consensus 180 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dva~~~~~l~s~~~~~~tG~~ 259 (285)
T 2p91_A 180 ALESTVRYLAYDIAKHGHRINAISAGPVKTLAAYSITGFHLLMEHTTKVNPFGKPITIEDVGDTAVFLCSDWARAITGEV 259 (285)
T ss_dssp HHHHHHHHHHHHHHTTTCEEEEEEECCCCCSCC--CTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHTSGGGTTCCSCE
T ss_pred HHHHHHHHHHHHhcccCcEEEEEEeCcccCchhhcccchHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCCcccCCCCCE
Confidence 1 112222233455799999999999654322110 0 00 0001122346789999999999996533 36889
Q ss_pred EEEecCC
Q 021928 280 FEVVNGE 286 (305)
Q Consensus 280 ~~v~~g~ 286 (305)
|++.+|.
T Consensus 260 ~~vdgg~ 266 (285)
T 2p91_A 260 VHVDNGY 266 (285)
T ss_dssp EEESTTG
T ss_pred EEECCCc
Confidence 9998874
|
| >3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A | Back alignment and structure |
|---|
Probab=99.67 E-value=1e-15 Score=137.08 Aligned_cols=191 Identities=10% Similarity=0.021 Sum_probs=124.1
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcch-hh------hhcCCCcEEeecCCCCHHHHHHHhc-------
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-AM------ESFGTYVESMAGDASNKKFLKTALR------- 161 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~-~~------~~~~~~v~~v~~D~~d~~~~~~~~~------- 161 (305)
..+|++|||||+|+||++++++|+++|++|+++.|+... .. ...+.++.++.+|++|.+++.++++
T Consensus 16 l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 95 (270)
T 3is3_A 16 LDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAHFG 95 (270)
T ss_dssp CTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 346999999999999999999999999999998776433 11 1234578999999999988887775
Q ss_pred CccEEEECCcc----h----------------------Hhhhhhhc--CCCEEEEEccccc-ccCCCCcccccchHH--H
Q 021928 162 GVRSIICPSEG----F----------------------ISNAGSLK--GVQHVILLSQLSV-YRGSGGIQALMKGNA--R 210 (305)
Q Consensus 162 ~~d~Vi~~~~g----~----------------------~~~~a~~~--gv~~~V~iSS~~~-~~~~~~~~~~~~~~~--~ 210 (305)
.+|++|++++. . +..++... .-.+||++||... ..+......|..++. .
T Consensus 96 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~asKaa~~ 175 (270)
T 3is3_A 96 HLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNTSKDFSVPKHSLYSGSKGAVD 175 (270)
T ss_dssp CCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCTTTTTCCCTTCHHHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCchhccCCCCCCchhHHHHHHHH
Confidence 67999987431 0 11112111 1359999999873 334344444544332 1
Q ss_pred HHHHHHHHHHHhCCCCEEEEecCCcccCCCC---------Ccce-------eeecCCCCCCccCHHHHHHHHHHHhhCCC
Q 021928 211 KLAEQDESMLMASGIPYTIIRTGVLQNTPGG---------KQGF-------QFEEGCAANGSLSKEDAAFICVEALESIP 274 (305)
Q Consensus 211 ~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~---------~~~~-------~~~~~~~~~~~Is~~DvA~~iv~~l~~~~ 274 (305)
.+.+.....+...+++++.|+||++...... .... .+..........+++|+|++++.++....
T Consensus 176 ~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~L~s~~~ 255 (270)
T 3is3_A 176 SFVRIFSKDCGDKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASPLHRNGWPQDVANVVGFLVSKEG 255 (270)
T ss_dssp HHHHHHHHHHGGGTCEEEEEEECSBCSTTHHHHGGGGSTTGGGSCHHHHHHHHHHHSTTCSCBCHHHHHHHHHHHTSGGG
T ss_pred HHHHHHHHHhcccCeEEEEEEeCCccChhhhhhhhhccccccccchHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCCcc
Confidence 1122222334557999999999996533210 0000 00011122346679999999999996543
Q ss_pred --CCCcEEEEecCC
Q 021928 275 --QTGLIFEVVNGE 286 (305)
Q Consensus 275 --~~~~~~~v~~g~ 286 (305)
..|+++++.+|.
T Consensus 256 ~~itG~~i~vdGG~ 269 (270)
T 3is3_A 256 EWVNGKVLTLDGGA 269 (270)
T ss_dssp TTCCSCEEEESTTC
T ss_pred CCccCcEEEeCCCC
Confidence 468999998763
|
| >1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... | Back alignment and structure |
|---|
Probab=99.67 E-value=4.2e-16 Score=140.59 Aligned_cols=173 Identities=14% Similarity=0.150 Sum_probs=117.5
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh------cC-CCcEEeecCCCCHHHHHHHhc-------C
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FG-TYVESMAGDASNKKFLKTALR-------G 162 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~-~~v~~v~~D~~d~~~~~~~~~-------~ 162 (305)
.+++|+||||+|+||++++++|+++|++|++++|++++..+. .+ .++.++.+|++|.+++.++++ +
T Consensus 27 ~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~ 106 (286)
T 1xu9_A 27 QGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGG 106 (286)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHTS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence 458999999999999999999999999999999997654321 12 368899999999888877665 7
Q ss_pred ccEEEEC-Ccch-------------------------Hhhh----hhhcCCCEEEEEcccccccCCCCcccccchHHH--
Q 021928 163 VRSIICP-SEGF-------------------------ISNA----GSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR-- 210 (305)
Q Consensus 163 ~d~Vi~~-~~g~-------------------------~~~~----a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~-- 210 (305)
+|+||++ ++.. +..+ .++ +.++||++||..++.+......|..++..
T Consensus 107 iD~li~naag~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~-~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~ 185 (286)
T 1xu9_A 107 LDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQ-SNGSIVVVSSLAGKVAYPMVAAYSASKFALD 185 (286)
T ss_dssp CSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH-HTCEEEEEEEGGGTSCCTTCHHHHHHHHHHH
T ss_pred CCEEEECCccCCCCccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHH-CCCEEEEECCcccccCCCCccHHHHHHHHHH
Confidence 8999987 3210 0111 112 24799999999887665555555544321
Q ss_pred HHHHHHHHHH--HhCCCCEEEEecCCcccCCCCCcceeeecCCCCCCccCHHHHHHHHHHHhhCCC
Q 021928 211 KLAEQDESML--MASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIP 274 (305)
Q Consensus 211 ~~~~~aE~~l--~~~gi~~tilRPg~l~~~~~~~~~~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~ 274 (305)
.+.+.....+ ...++.+++++||++........ . .+......++++|+|+.++.++..+.
T Consensus 186 ~~~~~l~~e~~~~~~~i~v~~v~Pg~v~t~~~~~~---~-~~~~~~~~~~~~~vA~~i~~~~~~~~ 247 (286)
T 1xu9_A 186 GFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKA---V-SGIVHMQAAPKEECALEIIKGGALRQ 247 (286)
T ss_dssp HHHHHHHHHHHHHTCCCEEEEEEECCBCCHHHHHH---S-CGGGGGGCBCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHhhcCCCeEEEEeecCccCChhHHHh---c-cccccCCCCCHHHHHHHHHHHHhcCC
Confidence 1112111222 45789999999999643211000 0 01112356899999999999997653
|
| >2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.67 E-value=1.6e-15 Score=139.93 Aligned_cols=190 Identities=11% Similarity=0.010 Sum_probs=129.3
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEE-cCcchhhh-------hcCCCcEEeecCCCCHH--------------
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALV-KDKRNAME-------SFGTYVESMAGDASNKK-------------- 154 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~-R~~~~~~~-------~~~~~v~~v~~D~~d~~-------------- 154 (305)
.+++||||||+|+||++++++|+++|++|++++ |++++..+ ..+.++.++.+|++|.+
T Consensus 45 ~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~ 124 (328)
T 2qhx_A 45 TVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVT 124 (328)
T ss_dssp CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCC-------CCBC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCeEEEEEeeCCCchhccccccccccccc
Confidence 458999999999999999999999999999999 88765322 12456889999999988
Q ss_pred ---HHHHHhc-------CccEEEECCcc------------------------h----------------Hhh----hhhh
Q 021928 155 ---FLKTALR-------GVRSIICPSEG------------------------F----------------ISN----AGSL 180 (305)
Q Consensus 155 ---~~~~~~~-------~~d~Vi~~~~g------------------------~----------------~~~----~a~~ 180 (305)
++.++++ .+|++|++++. . +.. .+.+
T Consensus 125 ~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~ 204 (328)
T 2qhx_A 125 LFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAG 204 (328)
T ss_dssp HHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-------------CHHHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 8777765 78999988431 0 001 1223
Q ss_pred cC------CCEEEEEcccccccCCCCcccccchHH--HHHHHHHHHHHHhCCCCEEEEecCCcccCCCCCccee--eecC
Q 021928 181 KG------VQHVILLSQLSVYRGSGGIQALMKGNA--RKLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQ--FEEG 250 (305)
Q Consensus 181 ~g------v~~~V~iSS~~~~~~~~~~~~~~~~~~--~~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~~~~~--~~~~ 250 (305)
.+ ..+||++||..++.+..+...|..+++ ..+.+.....+...++.++.|+||++........... +...
T Consensus 205 ~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~ 284 (328)
T 2qhx_A 205 TPAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVDDMPPAVWEGHRSK 284 (328)
T ss_dssp SCGGGSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCCCSCHHHHHHHHTT
T ss_pred cCCcCCCCCcEEEEECchhhccCCCCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCCccccHHHHHHHHhh
Confidence 34 679999999988776555555554432 1122222233455799999999999654331111000 0011
Q ss_pred CCCC-CccCHHHHHHHHHHHhhCCC--CCCcEEEEecCC
Q 021928 251 CAAN-GSLSKEDAAFICVEALESIP--QTGLIFEVVNGE 286 (305)
Q Consensus 251 ~~~~-~~Is~~DvA~~iv~~l~~~~--~~~~~~~v~~g~ 286 (305)
.... .+.+++|+|++++.++.... ..|+++.+.+|.
T Consensus 285 ~p~~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~ 323 (328)
T 2qhx_A 285 VPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGY 323 (328)
T ss_dssp CTTTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred CCCCCCCCCHHHHHHHHHHHhCccccCccCcEEEECCCc
Confidence 1222 56799999999999996432 468999998774
|
| >3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* | Back alignment and structure |
|---|
Probab=99.67 E-value=1.5e-15 Score=136.99 Aligned_cols=188 Identities=15% Similarity=0.126 Sum_probs=125.6
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh---hcCCCcEEeecCCCCHHHHHHHhc-------CccEE
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALR-------GVRSI 166 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~---~~~~~v~~v~~D~~d~~~~~~~~~-------~~d~V 166 (305)
.+|+++||||+|+||++++++|+++|++|+++.|+.++..+ ..+.++.++.+|++|.+++.++++ .+|++
T Consensus 4 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~l 83 (281)
T 3zv4_A 4 TGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAHGGNAVGVVGDVRSLQDQKRAAERCLAAFGKIDTL 83 (281)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTBTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCCCEE
Confidence 46899999999999999999999999999999999766433 234578999999999888776664 67999
Q ss_pred EECCcc-----h--------------------------Hhhh----hhhcCCCEEEEEcccccccCCCCcccccchHHH-
Q 021928 167 ICPSEG-----F--------------------------ISNA----GSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR- 210 (305)
Q Consensus 167 i~~~~g-----~--------------------------~~~~----a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~- 210 (305)
|++++. . +..+ ..+.+ .+||++||..++.+......|..++..
T Consensus 84 vnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~asKaa~ 162 (281)
T 3zv4_A 84 IPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSSR-GSVVFTISNAGFYPNGGGPLYTATKHAV 162 (281)
T ss_dssp ECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTSSSSSCHHHHHHHHHH
T ss_pred EECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CeEEEEecchhccCCCCCchhHHHHHHH
Confidence 988431 0 0001 12223 699999999888766665556544321
Q ss_pred -HHHHHHHHHHHhCCCCEEEEecCCcccCCCCCc-----cee---------eecCCCCCCccCHHHHHHHHHHHhhCCC-
Q 021928 211 -KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQ-----GFQ---------FEEGCAANGSLSKEDAAFICVEALESIP- 274 (305)
Q Consensus 211 -~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~~-----~~~---------~~~~~~~~~~Is~~DvA~~iv~~l~~~~- 274 (305)
.+.+.....+... +.+..|.||++........ ... +........+.+++|+|.+++.++.++.
T Consensus 163 ~~l~~~la~e~~~~-Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~fL~s~~~~ 241 (281)
T 3zv4_A 163 VGLVRQMAFELAPH-VRVNGVAPGGMNTDLRGPSSLGLSEQSISSVPLADMLKSVLPIGRMPALEEYTGAYVFFATRGDS 241 (281)
T ss_dssp HHHHHHHHHHHTTT-SEEEEEEECSSCC--CCCTTCC--------CCHHHHHHHTCTTSSCCCGGGGSHHHHHHHSTTTS
T ss_pred HHHHHHHHHHhcCC-CEEEEEECCcCcCCcccccccccccccccchhHHHHHHhcCCCCCCCCHHHHHHHHHHhhccccc
Confidence 1111111222334 9999999999653321100 000 0011122446688999999999997333
Q ss_pred --CCCcEEEEecCC
Q 021928 275 --QTGLIFEVVNGE 286 (305)
Q Consensus 275 --~~~~~~~v~~g~ 286 (305)
..|+++++.+|.
T Consensus 242 ~~itG~~i~vdGG~ 255 (281)
T 3zv4_A 242 LPATGALLNYDGGM 255 (281)
T ss_dssp TTCSSCEEEESSSG
T ss_pred ccccCcEEEECCCC
Confidence 468999999875
|
| >3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.67 E-value=5.2e-16 Score=137.78 Aligned_cols=188 Identities=12% Similarity=0.077 Sum_probs=123.1
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCC--CeEEEEEcCcchhhh---hcCCCcEEeecCCCCHHHHHHHhc-------Ccc
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALR-------GVR 164 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g--~~V~~~~R~~~~~~~---~~~~~v~~v~~D~~d~~~~~~~~~-------~~d 164 (305)
|+|+++||||+|+||++++++|+++| +.|+++.|+++...+ ..+.++.++.+|++|.++++++++ .+|
T Consensus 1 Mgk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id 80 (254)
T 3kzv_A 1 MGKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYGDRFFYVVGDITEDSVLKQLVNAAVKGHGKID 80 (254)
T ss_dssp -CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHHGGGEEEEESCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred CCCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHhcCCcc
Confidence 35899999999999999999999985 789999998765332 234578999999999988887775 689
Q ss_pred EEEECCcc-----h----------------------Hhhh----hhhcCCCEEEEEcccccccCCCCcccccchHHHHHH
Q 021928 165 SIICPSEG-----F----------------------ISNA----GSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLA 213 (305)
Q Consensus 165 ~Vi~~~~g-----~----------------------~~~~----a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~~~~ 213 (305)
++|++++. . +..+ .++.+ .+||++||..++.+......|..++..-..
T Consensus 81 ~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-g~iv~isS~~~~~~~~~~~~Y~asK~a~~~ 159 (254)
T 3kzv_A 81 SLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTN-GNVVFVSSDACNMYFSSWGAYGSSKAALNH 159 (254)
T ss_dssp EEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCSCCCCSSCCSHHHHHHHHHHHH
T ss_pred EEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CeEEEEcCchhccCCCCcchHHHHHHHHHH
Confidence 99987331 0 1111 23445 799999999888766665556543321111
Q ss_pred HHHHHHHHh-CCCCEEEEecCCcccCCCCCccee-------------eecCCCCCCccCHHHHHHHHHHHhhCCC---CC
Q 021928 214 EQDESMLMA-SGIPYTIIRTGVLQNTPGGKQGFQ-------------FEEGCAANGSLSKEDAAFICVEALESIP---QT 276 (305)
Q Consensus 214 ~~aE~~l~~-~gi~~tilRPg~l~~~~~~~~~~~-------------~~~~~~~~~~Is~~DvA~~iv~~l~~~~---~~ 276 (305)
..+.+-++ .+++++.|+||++........... +........+.+++|+|++++.++.+.. ..
T Consensus 160 -~~~~la~e~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~p~dva~~v~~L~s~~~~~~it 238 (254)
T 3kzv_A 160 -FAMTLANEERQVKAIAVAPGIVDTDMQVNIRENVGPSSMSAEQLKMFRGLKENNQLLDSSVPATVYAKLALHGIPDGVN 238 (254)
T ss_dssp -HHHHHHHHCTTSEEEEEECSSCCCCCSCCCCCCCCTTTSCHHHHHHHHHHHTTC----CHHHHHHHHHHHHHCCCGGGT
T ss_pred -HHHHHHhhccCcEEEEEeCCcccchhHHHhhcccCccccCHHHHHHHHHHHhcCCcCCcccHHHHHHHHHhhcccCCCC
Confidence 11111112 689999999999653322110000 0000112345688999999999997663 47
Q ss_pred CcEEEEecCC
Q 021928 277 GLIFEVVNGE 286 (305)
Q Consensus 277 ~~~~~v~~g~ 286 (305)
|+.+++.+++
T Consensus 239 G~~i~vdg~~ 248 (254)
T 3kzv_A 239 GQYLSYNDPA 248 (254)
T ss_dssp TCEEETTCGG
T ss_pred ccEEEecCcc
Confidence 8999888765
|
| >1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* | Back alignment and structure |
|---|
Probab=99.67 E-value=1.6e-15 Score=134.73 Aligned_cols=174 Identities=16% Similarity=0.085 Sum_probs=115.8
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHh-CCCeEEEEEcCcchhhhh------cCCCcEEeecCCCCHHHHHHHhc-------C
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIV-KRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------G 162 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~-~g~~V~~~~R~~~~~~~~------~~~~v~~v~~D~~d~~~~~~~~~-------~ 162 (305)
.+++|+||||+|+||++++++|++ .|++|++++|+.++..+. .+.++.++.+|++|.+++.++++ +
T Consensus 3 ~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~ 82 (276)
T 1wma_A 3 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGG 82 (276)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 358999999999999999999999 999999999987653221 23568999999999998888776 7
Q ss_pred ccEEEECCcch--------------------------Hhhhhhhc--CCCEEEEEcccccccC--C--------------
Q 021928 163 VRSIICPSEGF--------------------------ISNAGSLK--GVQHVILLSQLSVYRG--S-------------- 198 (305)
Q Consensus 163 ~d~Vi~~~~g~--------------------------~~~~a~~~--gv~~~V~iSS~~~~~~--~-------------- 198 (305)
+|+|||+++.. +..++... ...+||++||..++.+ .
T Consensus 83 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~ 162 (276)
T 1wma_A 83 LDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSETI 162 (276)
T ss_dssp EEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCHHHHHHHHCSSC
T ss_pred CCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEECChhhhcccccCChhHHhhcccccc
Confidence 89999884310 11112221 1259999999876532 0
Q ss_pred -------------------------CCcccccchHHH--HHHHHHHHHHHh----CCCCEEEEecCCcccCCCCCcceee
Q 021928 199 -------------------------GGIQALMKGNAR--KLAEQDESMLMA----SGIPYTIIRTGVLQNTPGGKQGFQF 247 (305)
Q Consensus 199 -------------------------~~~~~~~~~~~~--~~~~~aE~~l~~----~gi~~tilRPg~l~~~~~~~~~~~~ 247 (305)
.+...|..++.. .+.+.....+.. .+++++.|+||++.......
T Consensus 163 ~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~~~i~v~~v~PG~v~t~~~~~----- 237 (276)
T 1wma_A 163 TEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGP----- 237 (276)
T ss_dssp CHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTCT-----
T ss_pred chhhhhhhhhhhhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHhhcccCCCceEEEEecCCccccCcCCc-----
Confidence 011223222211 111111122333 68999999999975433211
Q ss_pred ecCCCCCCccCHHHHHHHHHHHhhCCC----CCCcEEE
Q 021928 248 EEGCAANGSLSKEDAAFICVEALESIP----QTGLIFE 281 (305)
Q Consensus 248 ~~~~~~~~~Is~~DvA~~iv~~l~~~~----~~~~~~~ 281 (305)
..+++++|+|+.++.++..+. ..|+.|.
T Consensus 238 ------~~~~~~~~~a~~~~~l~~~~~~~~~~~G~~~~ 269 (276)
T 1wma_A 238 ------KATKSPEEGAETPVYLALLPPDAEGPHGQFVS 269 (276)
T ss_dssp ------TCSBCHHHHTHHHHHHHSCCTTCCCCCSCEEE
T ss_pred ------cccCChhHhhhhHhhhhcCcccccccCceEec
Confidence 246899999999999997552 3566554
|
| >1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.67 E-value=2.8e-16 Score=137.81 Aligned_cols=181 Identities=8% Similarity=0.057 Sum_probs=119.8
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhc---------CccEEEE
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR---------GVRSIIC 168 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~---------~~d~Vi~ 168 (305)
+|+|+||||+|+||++++++|+++|++|++++|++++.. ....++.+|++|.+++.++++ ++|+|||
T Consensus 3 ~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~id~lv~ 78 (236)
T 1ooe_A 3 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA----DSNILVDGNKNWTEQEQSILEQTASSLQGSQVDGVFC 78 (236)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS----SEEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCccccc----cccEEEeCCCCCHHHHHHHHHHHHHHhCCCCCCEEEE
Confidence 489999999999999999999999999999999876533 235778999999888877664 7899998
Q ss_pred CCcc--------h-------------------Hhhhhhhc--CCCEEEEEcccccccCCCCcccccchHHHH--HHHHHH
Q 021928 169 PSEG--------F-------------------ISNAGSLK--GVQHVILLSQLSVYRGSGGIQALMKGNARK--LAEQDE 217 (305)
Q Consensus 169 ~~~g--------~-------------------~~~~a~~~--gv~~~V~iSS~~~~~~~~~~~~~~~~~~~~--~~~~aE 217 (305)
+++. . +..++... .-.+||++||..++.+......|..++... +.+...
T Consensus 79 ~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la 158 (236)
T 1ooe_A 79 VAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGPTPSMIGYGMAKAAVHHLTSSLA 158 (236)
T ss_dssp CCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTTBHHHHHHHHHHHHHHHHHH
T ss_pred CCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEECchhhccCCCCcHHHHHHHHHHHHHHHHHH
Confidence 8431 0 01111111 125899999998877655555554433211 111111
Q ss_pred HHHH--hCCCCEEEEecCCcccCCCCCcceeeecCCCCCCccCHHHHHHHHHHHhhCCC---CCCcEEEEecCC
Q 021928 218 SMLM--ASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIP---QTGLIFEVVNGE 286 (305)
Q Consensus 218 ~~l~--~~gi~~tilRPg~l~~~~~~~~~~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~---~~~~~~~v~~g~ 286 (305)
..+. ..+++++.|+||++...... . . . .......+++++|+|++++.++..+. ..|+.+.+.++.
T Consensus 159 ~e~~~~~~gi~v~~v~Pg~v~t~~~~-~-~-~-~~~~~~~~~~~~dvA~~i~~~l~s~~~~~~~G~~~~v~gg~ 228 (236)
T 1ooe_A 159 AKDSGLPDNSAVLTIMPVTLDTPMNR-K-W-M-PNADHSSWTPLSFISEHLLKWTTETSSRPSSGALLKITTEN 228 (236)
T ss_dssp STTSSCCTTCEEEEEEESCBCCHHHH-H-H-S-TTCCGGGCBCHHHHHHHHHHHHHCGGGCCCTTCEEEEEEET
T ss_pred HHhcccCCCeEEEEEecCcccCcchh-h-c-C-CCccccccCCHHHHHHHHHHHHcCCCcccccccEEEEecCC
Confidence 1122 45699999999986432110 0 0 0 01112346789999999997774332 458999998764
|
| >2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A* | Back alignment and structure |
|---|
Probab=99.67 E-value=8.5e-16 Score=136.88 Aligned_cols=190 Identities=11% Similarity=0.072 Sum_probs=124.2
Q ss_pred CCCEEEEEcCC--ChHHHHHHHHHHhCCCeEEEEEcCcc---hhhhh--cCCCcEEeecCCCCHHHHHHHhc-------C
Q 021928 97 ARDAVLVTDGD--SDIGQMVILSLIVKRTRIKALVKDKR---NAMES--FGTYVESMAGDASNKKFLKTALR-------G 162 (305)
Q Consensus 97 ~~~~vlVtGat--G~iG~~l~~~L~~~g~~V~~~~R~~~---~~~~~--~~~~v~~v~~D~~d~~~~~~~~~-------~ 162 (305)
.+|+|+||||+ |+||++++++|+++|++|++++|+++ ...+. ....+.++.+|++|.++++++++ +
T Consensus 7 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 86 (261)
T 2wyu_A 7 SGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAFGG 86 (261)
T ss_dssp TTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 45899999999 99999999999999999999999874 11111 11237899999999988887776 6
Q ss_pred ccEEEECCcc--------h----------------------Hhhhhhhc--CCCEEEEEcccccccCCCCcccccchHHH
Q 021928 163 VRSIICPSEG--------F----------------------ISNAGSLK--GVQHVILLSQLSVYRGSGGIQALMKGNAR 210 (305)
Q Consensus 163 ~d~Vi~~~~g--------~----------------------~~~~a~~~--gv~~~V~iSS~~~~~~~~~~~~~~~~~~~ 210 (305)
+|++||+++. . +..++... +-.+||++||..++.+......|..++..
T Consensus 87 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a 166 (261)
T 2wyu_A 87 LDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKVVPKYNVMAIAKAA 166 (261)
T ss_dssp EEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSBCTTCHHHHHHHHH
T ss_pred CCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhccCCEEEEEecccccCCCCCchHHHHHHHH
Confidence 8999988431 0 01111111 12589999998877655544455443321
Q ss_pred --HHHHHHHHHHHhCCCCEEEEecCCcccCCCCC-c--cee---eecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEE
Q 021928 211 --KLAEQDESMLMASGIPYTIIRTGVLQNTPGGK-Q--GFQ---FEEGCAANGSLSKEDAAFICVEALESIP--QTGLIF 280 (305)
Q Consensus 211 --~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~-~--~~~---~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~ 280 (305)
.+.+.....+...+++++.|+||++....... . ... +........+.+++|+|++++.++..+. ..|+.|
T Consensus 167 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dva~~v~~l~s~~~~~~tG~~~ 246 (261)
T 2wyu_A 167 LEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPLRRNITQEEVGNLGLFLLSPLASGITGEVV 246 (261)
T ss_dssp HHHHHHHHHHHHGGGTCEEEEEEECCCCCTGGGGCTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred HHHHHHHHHHHHhhhCcEEEEEeeCCCcCchhhhccccHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcChhhcCCCCCEE
Confidence 11122222344579999999999965432110 0 000 0011122346789999999999996533 358999
Q ss_pred EEecCC
Q 021928 281 EVVNGE 286 (305)
Q Consensus 281 ~v~~g~ 286 (305)
++.+|.
T Consensus 247 ~vdgG~ 252 (261)
T 2wyu_A 247 YVDAGY 252 (261)
T ss_dssp EESTTG
T ss_pred EECCCc
Confidence 999875
|
| >1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* | Back alignment and structure |
|---|
Probab=99.66 E-value=2.8e-16 Score=138.30 Aligned_cols=182 Identities=13% Similarity=0.085 Sum_probs=121.3
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhc---------CccEEE
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR---------GVRSII 167 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~---------~~d~Vi 167 (305)
.+|+|+||||+|+||++++++|+++|++|++++|+++... ....++.+|++|.+++.++++ ++|++|
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~----~~~~~~~~D~~~~~~v~~~~~~~~~~~~~g~iD~lv 81 (241)
T 1dhr_A 6 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA----SASVIVKMTDSFTEQADQVTAEVGKLLGDQKVDAIL 81 (241)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS----SEEEECCCCSCHHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhcc----CCcEEEEcCCCCHHHHHHHHHHHHHHhCCCCCCEEE
Confidence 4589999999999999999999999999999999876533 235778999999988877665 689999
Q ss_pred ECCcc--------h-------------------Hhhhhhhc--CCCEEEEEcccccccCCCCcccccchHHHH--HHHHH
Q 021928 168 CPSEG--------F-------------------ISNAGSLK--GVQHVILLSQLSVYRGSGGIQALMKGNARK--LAEQD 216 (305)
Q Consensus 168 ~~~~g--------~-------------------~~~~a~~~--gv~~~V~iSS~~~~~~~~~~~~~~~~~~~~--~~~~a 216 (305)
|+++. . +..++... .-.+||++||..++.+......|..++... +.+..
T Consensus 82 ~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~l 161 (241)
T 1dhr_A 82 CVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDGTPGMIGYGMAKGAVHQLCQSL 161 (241)
T ss_dssp ECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTTBHHHHHHHHHHHHHHHHH
T ss_pred EcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCEEEEECCHHHccCCCCchHHHHHHHHHHHHHHHH
Confidence 88431 0 00111110 125999999998877655555554432211 11111
Q ss_pred HHHHH--hCCCCEEEEecCCcccCCCCCcceeeecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEEEEecCC
Q 021928 217 ESMLM--ASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVNGE 286 (305)
Q Consensus 217 E~~l~--~~gi~~tilRPg~l~~~~~~~~~~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~v~~g~ 286 (305)
...+. ..+++++.|+||++....... . . .......+++++|+|++++.++.... ..|+.+.+.++.
T Consensus 162 a~e~~~~~~gi~v~~v~PG~v~T~~~~~--~-~-~~~~~~~~~~~~~vA~~v~~l~~~~~~~~~G~~~~v~g~~ 231 (241)
T 1dhr_A 162 AGKNSGMPSGAAAIAVLPVTLDTPMNRK--S-M-PEADFSSWTPLEFLVETFHDWITGNKRPNSGSLIQVVTTD 231 (241)
T ss_dssp TSTTSSCCTTCEEEEEEESCEECHHHHH--H-S-TTSCGGGSEEHHHHHHHHHHHHTTTTCCCTTCEEEEEEET
T ss_pred HHHhccCCCCeEEEEEecCcccCccccc--c-C-cchhhccCCCHHHHHHHHHHHhcCCCcCccceEEEEeCCC
Confidence 11122 457999999999864321100 0 0 01112346789999999999997544 358899988754
|
| >3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.66 E-value=2.4e-15 Score=133.95 Aligned_cols=193 Identities=12% Similarity=0.031 Sum_probs=127.2
Q ss_pred cCCCCEEEEEcCC--ChHHHHHHHHHHhCCCeEEEEEcCcchhh---h--hcCCCcEEeecCCCCHHHHHHHhc------
Q 021928 95 PEARDAVLVTDGD--SDIGQMVILSLIVKRTRIKALVKDKRNAM---E--SFGTYVESMAGDASNKKFLKTALR------ 161 (305)
Q Consensus 95 ~~~~~~vlVtGat--G~iG~~l~~~L~~~g~~V~~~~R~~~~~~---~--~~~~~v~~v~~D~~d~~~~~~~~~------ 161 (305)
....|+||||||+ |+||++++++|+++|++|++++|+..... + .....+.++.+|++|.+++.++++
T Consensus 11 ~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 90 (271)
T 3ek2_A 11 FLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSELVFPCDVADDAQIDALFASLKTHW 90 (271)
T ss_dssp TTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHC
T ss_pred ccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHcCCcEEEECCCCCHHHHHHHHHHHHHHc
Confidence 4456999999999 99999999999999999999999854311 1 112358899999999988887775
Q ss_pred -CccEEEECCcc-------------h------------------Hhhhhhh--cCCCEEEEEcccccccCCCCcccccch
Q 021928 162 -GVRSIICPSEG-------------F------------------ISNAGSL--KGVQHVILLSQLSVYRGSGGIQALMKG 207 (305)
Q Consensus 162 -~~d~Vi~~~~g-------------~------------------~~~~a~~--~gv~~~V~iSS~~~~~~~~~~~~~~~~ 207 (305)
.+|++|++++. . +..++.. ..-.+||++||..++.+......|..+
T Consensus 91 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as 170 (271)
T 3ek2_A 91 DSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAERAIPNYNTMGLA 170 (271)
T ss_dssp SCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTTTTHHHHH
T ss_pred CCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEeccccccCCCCccchhHH
Confidence 57999988331 0 0011111 113489999999887766555555443
Q ss_pred HH--HHHHHHHHHHHHhCCCCEEEEecCCcccCCCCCcc---e---eeecCCCCCCccCHHHHHHHHHHHhhCC--CCCC
Q 021928 208 NA--RKLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQG---F---QFEEGCAANGSLSKEDAAFICVEALESI--PQTG 277 (305)
Q Consensus 208 ~~--~~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~~~---~---~~~~~~~~~~~Is~~DvA~~iv~~l~~~--~~~~ 277 (305)
++ ..+.+.....+...++.++.|+||++......... . .+........+.+++|+|++++.++.+. ...|
T Consensus 171 Kaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~pedva~~i~~l~s~~~~~~tG 250 (271)
T 3ek2_A 171 KAALEASVRYLAVSLGAKGVRVNAISAGPIKTLAASGIKSFGKILDFVESNSPLKRNVTIEQVGNAGAFLLSDLASGVTA 250 (271)
T ss_dssp HHHHHHHHHHHHHHHHTTTCEEEEEEECCC-----CCCHHHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGGTTCCS
T ss_pred HHHHHHHHHHHHHHHHhcCcEEEEEecCcccchhhhcccchHHHHHHHHhcCCcCCCCCHHHHHHHHHHHcCcccCCeee
Confidence 32 11122222334567999999999996543221100 0 0001122345679999999999999753 3578
Q ss_pred cEEEEecCCc
Q 021928 278 LIFEVVNGEE 287 (305)
Q Consensus 278 ~~~~v~~g~~ 287 (305)
+++++.+|..
T Consensus 251 ~~i~vdgG~~ 260 (271)
T 3ek2_A 251 EVMHVDSGFN 260 (271)
T ss_dssp EEEEESTTGG
T ss_pred eEEEECCCee
Confidence 9999998863
|
| >3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A* | Back alignment and structure |
|---|
Probab=99.66 E-value=5.4e-15 Score=134.32 Aligned_cols=191 Identities=8% Similarity=-0.014 Sum_probs=127.9
Q ss_pred CCCCEEEEEcCCC--hHHHHHHHHHHhCCCeEEEEEcCcchhhh---h--cCCCcEEeecCCCCHHHHHHHhc-------
Q 021928 96 EARDAVLVTDGDS--DIGQMVILSLIVKRTRIKALVKDKRNAME---S--FGTYVESMAGDASNKKFLKTALR------- 161 (305)
Q Consensus 96 ~~~~~vlVtGatG--~iG~~l~~~L~~~g~~V~~~~R~~~~~~~---~--~~~~v~~v~~D~~d~~~~~~~~~------- 161 (305)
..+|+++||||+| +||++++++|+++|++|++++|+.+.... . ....+.++.+|++|.++++++++
T Consensus 28 l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 107 (296)
T 3k31_A 28 MEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLGVKLTVPCDVSDAESVDNMFKVLAEEWG 107 (296)
T ss_dssp TTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred cCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 3468999999997 99999999999999999999998643211 1 11347899999999988887775
Q ss_pred CccEEEECCcc--------h----------------------Hhhhhhh--cCCCEEEEEcccccccCCCCcccccchHH
Q 021928 162 GVRSIICPSEG--------F----------------------ISNAGSL--KGVQHVILLSQLSVYRGSGGIQALMKGNA 209 (305)
Q Consensus 162 ~~d~Vi~~~~g--------~----------------------~~~~a~~--~gv~~~V~iSS~~~~~~~~~~~~~~~~~~ 209 (305)
.+|++|++++- . +..++.. ..-.+||++||..++.+......|..++.
T Consensus 108 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS~~~~~~~~~~~~Y~asKa 187 (296)
T 3k31_A 108 SLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSYYGAEKVVPHYNVMGVCKA 187 (296)
T ss_dssp CCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSCCTTTTHHHHHHH
T ss_pred CCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEehhhccCCCCchhhHHHHH
Confidence 67999988431 0 0111111 12359999999988776555555544332
Q ss_pred --HHHHHHHHHHHHhCCCCEEEEecCCcccCCCCCcc------eeeecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcE
Q 021928 210 --RKLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQG------FQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLI 279 (305)
Q Consensus 210 --~~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~~~------~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~ 279 (305)
..+.+.....+...++.++.|+||++......... ..+........+.+++|+|++++.++.+.. ..|++
T Consensus 188 al~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~fL~s~~a~~itG~~ 267 (296)
T 3k31_A 188 ALEASVKYLAVDLGKQQIRVNAISAGPVRTLASSGISDFHYILTWNKYNSPLRRNTTLDDVGGAALYLLSDLGRGTTGET 267 (296)
T ss_dssp HHHHHHHHHHHHHHTTTEEEEEEEECCCCCSSCCSCHHHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred HHHHHHHHHHHHHhhcCcEEEEEEECCCcCchhhcccchHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCCccCCccCCE
Confidence 11222222334567999999999996543221110 000011122456789999999999997533 46899
Q ss_pred EEEecCC
Q 021928 280 FEVVNGE 286 (305)
Q Consensus 280 ~~v~~g~ 286 (305)
+++.+|.
T Consensus 268 i~vdGG~ 274 (296)
T 3k31_A 268 VHVDCGY 274 (296)
T ss_dssp EEESTTG
T ss_pred EEECCCc
Confidence 9999875
|
| >1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* | Back alignment and structure |
|---|
Probab=99.66 E-value=1.1e-15 Score=138.50 Aligned_cols=191 Identities=11% Similarity=0.012 Sum_probs=129.3
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEE-cCcchhhh-------hcCCCcEEeecCCCCHH-------------
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALV-KDKRNAME-------SFGTYVESMAGDASNKK------------- 154 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~-R~~~~~~~-------~~~~~v~~v~~D~~d~~------------- 154 (305)
..+|+++||||+|+||++++++|+++|++|++++ |++++..+ ..+.++.++.+|++|.+
T Consensus 7 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 86 (291)
T 1e7w_A 7 PTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPV 86 (291)
T ss_dssp -CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCB
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhcCCeeEEEEeecCCccccccccccccccc
Confidence 3458999999999999999999999999999999 98755321 22457899999999988
Q ss_pred ----HHHHHhc-------CccEEEECCcc------------------------h----------------Hhh----hhh
Q 021928 155 ----FLKTALR-------GVRSIICPSEG------------------------F----------------ISN----AGS 179 (305)
Q Consensus 155 ----~~~~~~~-------~~d~Vi~~~~g------------------------~----------------~~~----~a~ 179 (305)
++.++++ .+|++|++++. . +.. .++
T Consensus 87 ~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~ 166 (291)
T 1e7w_A 87 TLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVA 166 (291)
T ss_dssp CHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 8777665 78999988431 0 001 122
Q ss_pred hcC------CCEEEEEcccccccCCCCcccccchHH--HHHHHHHHHHHHhCCCCEEEEecCCcccCCCCCcce--eeec
Q 021928 180 LKG------VQHVILLSQLSVYRGSGGIQALMKGNA--RKLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGF--QFEE 249 (305)
Q Consensus 180 ~~g------v~~~V~iSS~~~~~~~~~~~~~~~~~~--~~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~~~~--~~~~ 249 (305)
+.+ ..+||++||..++.+..+...|..++. ..+.+.....+...++.++.|+||++.......... .+..
T Consensus 167 ~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~ 246 (291)
T 1e7w_A 167 GTPAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVDDMPPAVWEGHRS 246 (291)
T ss_dssp TSCGGGSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGGGSCHHHHHHHHT
T ss_pred hcCCCCCCCCcEEEEEechhhcCCCCCCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCccCCccCCHHHHHHHHh
Confidence 334 579999999988776655555654432 112222333455679999999999964332100000 0001
Q ss_pred CCCCC-CccCHHHHHHHHHHHhhCCC--CCCcEEEEecCC
Q 021928 250 GCAAN-GSLSKEDAAFICVEALESIP--QTGLIFEVVNGE 286 (305)
Q Consensus 250 ~~~~~-~~Is~~DvA~~iv~~l~~~~--~~~~~~~v~~g~ 286 (305)
..... .+.+++|+|++++.++.... ..|+.+.+.+|.
T Consensus 247 ~~p~~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~ 286 (291)
T 1e7w_A 247 KVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGY 286 (291)
T ss_dssp TCTTTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred hCCCCCCCCCHHHHHHHHHHHhCCcccCccCcEEEECCCc
Confidence 11122 46789999999999997533 468899988774
|
| >3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=99.66 E-value=2.7e-15 Score=132.57 Aligned_cols=190 Identities=17% Similarity=0.102 Sum_probs=125.5
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEE-cCcchhhh------hcCCCcEEeecCCCCHHHHHHHhcC-------
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALV-KDKRNAME------SFGTYVESMAGDASNKKFLKTALRG------- 162 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~-R~~~~~~~------~~~~~v~~v~~D~~d~~~~~~~~~~------- 162 (305)
.+|+++||||+|+||++++++|+++|++|+++. |+.+...+ ..+..+.++.+|++|.++++.+++.
T Consensus 6 ~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 85 (255)
T 3icc_A 6 KGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQN 85 (255)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhcCCceEEEecCcCCHHHHHHHHHHHHHHhcc
Confidence 358999999999999999999999999999864 44443221 1245688999999998887766642
Q ss_pred ------ccEEEECCcc----h----------------------Hhhhhhh--cCCCEEEEEcccccccCCCCcccccchH
Q 021928 163 ------VRSIICPSEG----F----------------------ISNAGSL--KGVQHVILLSQLSVYRGSGGIQALMKGN 208 (305)
Q Consensus 163 ------~d~Vi~~~~g----~----------------------~~~~a~~--~gv~~~V~iSS~~~~~~~~~~~~~~~~~ 208 (305)
+|++|++++. . +..++.. .+..+||++||..++.+.+....|..++
T Consensus 86 ~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asK 165 (255)
T 3icc_A 86 RTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRISLPDFIAYSMTK 165 (255)
T ss_dssp HHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGTSCCTTBHHHHHHH
T ss_pred cccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCCCCEEEEeCChhhccCCCCcchhHHhH
Confidence 8999988431 0 0111111 1235899999998887766665565443
Q ss_pred HH--HHHHHHHHHHHhCCCCEEEEecCCcccCCCCC---cc---eeeecCCCCCCccCHHHHHHHHHHHhhCCC--CCCc
Q 021928 209 AR--KLAEQDESMLMASGIPYTIIRTGVLQNTPGGK---QG---FQFEEGCAANGSLSKEDAAFICVEALESIP--QTGL 278 (305)
Q Consensus 209 ~~--~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~---~~---~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~ 278 (305)
.. .+.+.....+...++.++.++||++....... .. ...........+.+++|+|++++.++.... ..|+
T Consensus 166 aa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~tG~ 245 (255)
T 3icc_A 166 GAINTMTFTLAKQLGARGITVNAILPGFVKTDMNAELLSDPMMKQYATTISAFNRLGEVEDIADTAAFLASPDSRWVTGQ 245 (255)
T ss_dssp HHHHHHHHHHHHHHGGGTCEEEEEEECCBCCSSSTTTTTSHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSC
T ss_pred HHHHHHHHHHHHHHHhcCeEEEEEEEeeecccchhhhcccHHHHHhhhccCCcCCCCCHHHHHHHHHHHhCcccCCccCC
Confidence 21 11222223345579999999999965432211 00 000111223456789999999999986433 4689
Q ss_pred EEEEecCC
Q 021928 279 IFEVVNGE 286 (305)
Q Consensus 279 ~~~v~~g~ 286 (305)
++++.+|.
T Consensus 246 ~i~vdgG~ 253 (255)
T 3icc_A 246 LIDVSGGS 253 (255)
T ss_dssp EEEESSST
T ss_pred EEEecCCe
Confidence 99998774
|
| >3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A* | Back alignment and structure |
|---|
Probab=99.65 E-value=2.5e-15 Score=135.31 Aligned_cols=192 Identities=10% Similarity=0.059 Sum_probs=128.3
Q ss_pred cCCCCEEEEEcCCCh--HHHHHHHHHHhCCCeEEEEEcCc--chhhhh--cCCCcEEeecCCCCHHHHHHHhc-------
Q 021928 95 PEARDAVLVTDGDSD--IGQMVILSLIVKRTRIKALVKDK--RNAMES--FGTYVESMAGDASNKKFLKTALR------- 161 (305)
Q Consensus 95 ~~~~~~vlVtGatG~--iG~~l~~~L~~~g~~V~~~~R~~--~~~~~~--~~~~v~~v~~D~~d~~~~~~~~~------- 161 (305)
...+|+|+||||+|+ ||++++++|+++|++|++++|+. +...+. ....+.++.+|++|.++++++++
T Consensus 23 ~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 102 (280)
T 3nrc_A 23 FLAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQFKDRVEKLCAEFNPAAVLPCDVISDQEIKDLFVELGKVWD 102 (280)
T ss_dssp TTTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHGGGCCSEEEECCTTCHHHHHHHHHHHHHHCS
T ss_pred ccCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCchHHHHHHHHHHhcCCceEEEeecCCHHHHHHHHHHHHHHcC
Confidence 345699999999955 99999999999999999999987 222221 12358999999999988887765
Q ss_pred CccEEEECCcc-------------h------------------Hhhhhh---hcCCCEEEEEcccccccCCCCcccccch
Q 021928 162 GVRSIICPSEG-------------F------------------ISNAGS---LKGVQHVILLSQLSVYRGSGGIQALMKG 207 (305)
Q Consensus 162 ~~d~Vi~~~~g-------------~------------------~~~~a~---~~gv~~~V~iSS~~~~~~~~~~~~~~~~ 207 (305)
.+|++|++++- . +..++. .....+||++||..++.+......|..+
T Consensus 103 ~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as 182 (280)
T 3nrc_A 103 GLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNRNASMVALTYIGAEKAMPSYNTMGVA 182 (280)
T ss_dssp SCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECGGGTSCCTTTHHHHHH
T ss_pred CCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeccccccCCCCchhhHHH
Confidence 46999988331 0 001111 1235799999999888766655555543
Q ss_pred HH--HHHHHHHHHHHHhCCCCEEEEecCCcccCCCCC-c---ce--eeecCCCCCCccCHHHHHHHHHHHhhCCC--CCC
Q 021928 208 NA--RKLAEQDESMLMASGIPYTIIRTGVLQNTPGGK-Q---GF--QFEEGCAANGSLSKEDAAFICVEALESIP--QTG 277 (305)
Q Consensus 208 ~~--~~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~-~---~~--~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~ 277 (305)
+. ..+.+.....+...++.++.|+||++....... . .. .+........+.+++|+|++++.++.+.. ..|
T Consensus 183 Kaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~~~~~pedvA~~v~~l~s~~~~~~tG 262 (280)
T 3nrc_A 183 KASLEATVRYTALALGEDGIKVNAVSAGPIKTLAASGISNFKKMLDYNAMVSPLKKNVDIMEVGNTVAFLCSDMATGITG 262 (280)
T ss_dssp HHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCSGGGGCTTHHHHHHHHHHHSTTCSCCCHHHHHHHHHHTTSGGGTTCCS
T ss_pred HHHHHHHHHHHHHHHHHcCcEEEEEeeccccchhhhcCcchHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCcccCCcCC
Confidence 32 112222223345679999999999965332110 0 00 00011123456889999999999997543 578
Q ss_pred cEEEEecCC
Q 021928 278 LIFEVVNGE 286 (305)
Q Consensus 278 ~~~~v~~g~ 286 (305)
+++++.+|.
T Consensus 263 ~~i~vdgG~ 271 (280)
T 3nrc_A 263 EVVHVDAGY 271 (280)
T ss_dssp CEEEESTTG
T ss_pred cEEEECCCc
Confidence 999999875
|
| >2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.65 E-value=3.3e-15 Score=132.86 Aligned_cols=186 Identities=13% Similarity=0.102 Sum_probs=118.7
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh------cCCCcEEeecCCCCHHHHHHHh--------cC
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTAL--------RG 162 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~~~v~~v~~D~~d~~~~~~~~--------~~ 162 (305)
.+|+++||||+|+||++++++|+++|++|+++.|++++..+. .+.++.++.+|++|.+++.+++ ..
T Consensus 4 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g~ 83 (260)
T 2qq5_A 4 NGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDREQQGR 83 (260)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHHHTTC
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence 358999999999999999999999999999999987653221 1446889999999988876654 35
Q ss_pred ccEEEECCc-ch------------------------------------HhhhhhhcCCCEEEEEcccccccCCCCccccc
Q 021928 163 VRSIICPSE-GF------------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALM 205 (305)
Q Consensus 163 ~d~Vi~~~~-g~------------------------------------~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~ 205 (305)
+|++|++++ +. ....+.+.+..+||++||..++.+.. ...|.
T Consensus 84 id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-~~~Y~ 162 (260)
T 2qq5_A 84 LDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAGQGLIVVISSPGSLQYMF-NVPYG 162 (260)
T ss_dssp CCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGTCCEEEEECCGGGTSCCS-SHHHH
T ss_pred ceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcCCcEEEEEcChhhcCCCC-CCchH
Confidence 699998862 10 00112345678999999988765432 23343
Q ss_pred chHH--HHHHHHHHHHHHhCCCCEEEEecCCcccCCCCC----ccee----ee-cCCCCCCccCHHHHHHHHHHHhhCCC
Q 021928 206 KGNA--RKLAEQDESMLMASGIPYTIIRTGVLQNTPGGK----QGFQ----FE-EGCAANGSLSKEDAAFICVEALESIP 274 (305)
Q Consensus 206 ~~~~--~~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~----~~~~----~~-~~~~~~~~Is~~DvA~~iv~~l~~~~ 274 (305)
.++. ..+.+.....+...+++++.|+||++....... .... .. .........+++|+|++++.++..+.
T Consensus 163 asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~va~~v~~l~s~~~ 242 (260)
T 2qq5_A 163 VGKAACDKLAADCAHELRRHGVSCVSLWPGIVQTELLKEHMAKEEVLQDPVLKQFKSAFSSAETTELSGKCVVALATDPN 242 (260)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTCEEEEEECCCSCTTTC----------------------CHHHHHHHHHHHHHHHHTCTT
T ss_pred HHHHHHHHHHHHHHHHhccCCeEEEEEecCccccHHHHHhhccccccchhHHHHHHhhhccCCCHHHHHHHHHHHhcCcc
Confidence 3322 111122223345679999999999964332111 0000 00 00001123478999999999997664
Q ss_pred C---CCcEEEEe
Q 021928 275 Q---TGLIFEVV 283 (305)
Q Consensus 275 ~---~~~~~~v~ 283 (305)
. .|+.+.+.
T Consensus 243 ~~~itG~~i~~~ 254 (260)
T 2qq5_A 243 ILSLSGKVLPSC 254 (260)
T ss_dssp GGGGTTCEEEHH
T ss_pred cccccceeechh
Confidence 2 56666543
|
| >1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A* | Back alignment and structure |
|---|
Probab=99.65 E-value=1.4e-15 Score=135.67 Aligned_cols=190 Identities=12% Similarity=0.042 Sum_probs=123.1
Q ss_pred CCCEEEEEcCC--ChHHHHHHHHHHhCCCeEEEEEcCcc---hhhhh--cCCCcEEeecCCCCHHHHHHHhc-------C
Q 021928 97 ARDAVLVTDGD--SDIGQMVILSLIVKRTRIKALVKDKR---NAMES--FGTYVESMAGDASNKKFLKTALR-------G 162 (305)
Q Consensus 97 ~~~~vlVtGat--G~iG~~l~~~L~~~g~~V~~~~R~~~---~~~~~--~~~~v~~v~~D~~d~~~~~~~~~-------~ 162 (305)
.+|+|+||||+ |+||++++++|+++|++|++++|++. ...+. ......++.+|++|.+++.++++ +
T Consensus 8 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 87 (265)
T 1qsg_A 8 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWPK 87 (265)
T ss_dssp TTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCSS
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHHhcCCcEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 34899999999 99999999999999999999999872 11111 11235789999999998887775 6
Q ss_pred ccEEEECCcc--------hHhh-----------------------hhhhc--CCCEEEEEcccccccCCCCcccccchHH
Q 021928 163 VRSIICPSEG--------FISN-----------------------AGSLK--GVQHVILLSQLSVYRGSGGIQALMKGNA 209 (305)
Q Consensus 163 ~d~Vi~~~~g--------~~~~-----------------------~a~~~--gv~~~V~iSS~~~~~~~~~~~~~~~~~~ 209 (305)
+|++||+++. .+.+ ++... +-.+||++||..++.+......|..++.
T Consensus 88 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~ 167 (265)
T 1qsg_A 88 FDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPNYNVMGLAKA 167 (265)
T ss_dssp EEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTTTTHHHHHHH
T ss_pred CCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEcchhhccCCCCchHHHHHHH
Confidence 7999988331 0111 11111 1258999999887766554445544332
Q ss_pred H--HHHHHHHHHHHhCCCCEEEEecCCcccCCCCCc-c--ee---eecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcE
Q 021928 210 R--KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQ-G--FQ---FEEGCAANGSLSKEDAAFICVEALESIP--QTGLI 279 (305)
Q Consensus 210 ~--~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~~-~--~~---~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~ 279 (305)
. .+.+.....+...+++++.|+||++........ . .. +........+.+++|+|++++.++.++. ..++.
T Consensus 168 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dva~~v~~l~s~~~~~~tG~~ 247 (265)
T 1qsg_A 168 SLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAAFLCSDLSAGISGEV 247 (265)
T ss_dssp HHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHTSGGGTTCCSCE
T ss_pred HHHHHHHHHHHHhhhcCeEEEEEEeCCCccchhhcccccHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCchhcCccCCE
Confidence 1 111222222345689999999999654321110 0 00 0011122346799999999999997543 36889
Q ss_pred EEEecCC
Q 021928 280 FEVVNGE 286 (305)
Q Consensus 280 ~~v~~g~ 286 (305)
+++.+|.
T Consensus 248 ~~vdgG~ 254 (265)
T 1qsg_A 248 VHVDGGF 254 (265)
T ss_dssp EEESTTG
T ss_pred EEECCCc
Confidence 9999875
|
| >3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.65 E-value=9.4e-16 Score=134.99 Aligned_cols=183 Identities=10% Similarity=0.032 Sum_probs=122.0
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh-------cCCCcEEeecCC--CCHHHHHHHhc-----
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------FGTYVESMAGDA--SNKKFLKTALR----- 161 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~-------~~~~v~~v~~D~--~d~~~~~~~~~----- 161 (305)
..+++++||||+|+||++++++|+++|++|++++|++++..+. ....+.++.+|+ .|.+++.++++
T Consensus 12 l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~~~ 91 (247)
T 3i1j_A 12 LKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVEHE 91 (247)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHHHHh
Confidence 3468999999999999999999999999999999997663321 124577888877 88877776654
Q ss_pred --CccEEEECCcc-----h----------------------Hhh----hhhhcCCCEEEEEcccccccCCCCcccccchH
Q 021928 162 --GVRSIICPSEG-----F----------------------ISN----AGSLKGVQHVILLSQLSVYRGSGGIQALMKGN 208 (305)
Q Consensus 162 --~~d~Vi~~~~g-----~----------------------~~~----~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~ 208 (305)
++|++||+++. . +.. ..++.+..+||++||..++.+......|..++
T Consensus 92 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK 171 (247)
T 3i1j_A 92 FGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSEDASIAFTSSSVGRKGRANWGAYGVSK 171 (247)
T ss_dssp HSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred CCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCeEEEEcchhhcCCCCCcchhHHHH
Confidence 78999988431 0 111 12445667999999998877666655565433
Q ss_pred HH--HHHHHHHHHHHh-CCCCEEEEecCCcccCCCCCcceeeecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEEEE
Q 021928 209 AR--KLAEQDESMLMA-SGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEV 282 (305)
Q Consensus 209 ~~--~~~~~aE~~l~~-~gi~~tilRPg~l~~~~~~~~~~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~v 282 (305)
.. .+.+.....+.. .++.++.|+||++........ . .........+++|+|++++.++.... ..|+.+++
T Consensus 172 ~a~~~~~~~la~e~~~~~~i~v~~v~PG~v~t~~~~~~---~-~~~~~~~~~~p~dva~~~~~l~s~~~~~itG~~i~~ 246 (247)
T 3i1j_A 172 FATEGLMQTLADELEGVTAVRANSINPGATRTGMRAQA---Y-PDENPLNNPAPEDIMPVYLYLMGPDSTGINGQALNA 246 (247)
T ss_dssp HHHHHHHHHHHHHHTTTSSEEEEEEECCCCSSHHHHHH---S-TTSCGGGSCCGGGGTHHHHHHHSGGGTTCCSCEEEC
T ss_pred HHHHHHHHHHHHHhcCCCCeEEEEEecCcccCccchhc---c-cccCccCCCCHHHHHHHHHHHhCchhccccCeeecC
Confidence 21 111112222333 689999999999643211000 0 11122345788999999999996433 45777764
|
| >3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.65 E-value=2.8e-15 Score=139.37 Aligned_cols=185 Identities=12% Similarity=0.050 Sum_probs=122.4
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhh-------------hhcCCCcEEeecCCCCHHHHHHHhc-
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM-------------ESFGTYVESMAGDASNKKFLKTALR- 161 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~-------------~~~~~~v~~v~~D~~d~~~~~~~~~- 161 (305)
..+++|+||||+|+||++++++|+++|++|+++.|+.++.. +..+.++.++.+|++|.++++++++
T Consensus 43 l~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~ 122 (346)
T 3kvo_A 43 LAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAAVEK 122 (346)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred CCCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHH
Confidence 45699999999999999999999999999999999876411 1224578899999999988887775
Q ss_pred ------CccEEEECCcch--------------------------Hhh----hhhhcCCCEEEEEcccccccC--CCCccc
Q 021928 162 ------GVRSIICPSEGF--------------------------ISN----AGSLKGVQHVILLSQLSVYRG--SGGIQA 203 (305)
Q Consensus 162 ------~~d~Vi~~~~g~--------------------------~~~----~a~~~gv~~~V~iSS~~~~~~--~~~~~~ 203 (305)
++|++|++++.. +.. ..++.+..+||++||...+.+ ......
T Consensus 123 ~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~~~~~~~~~~~~~~ 202 (346)
T 3kvo_A 123 AIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNLNPVWFKQHCA 202 (346)
T ss_dssp HHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSSCEEEEECCCCCCCGGGTSSSHH
T ss_pred HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCCEEEEECCHHHcCCCCCCCchH
Confidence 789999884310 111 124556789999999887654 333344
Q ss_pred ccchHHH--HHHHHHHHHHHhCCCCEEEEecCCcccCCCCCcceeeecCCCCCCccCHHHHHHHHHHHhhCCC-CCCcEE
Q 021928 204 LMKGNAR--KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIP-QTGLIF 280 (305)
Q Consensus 204 ~~~~~~~--~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~~~~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~-~~~~~~ 280 (305)
|..+++. .+.+.....+. .++.++.|.||+..+...... +..........+++|+|++++.++.+.. ..|+.+
T Consensus 203 Y~aSKaal~~l~~~la~e~~-~gIrvn~v~PG~~i~T~~~~~---~~~~~~~~r~~~pedvA~~v~~L~s~~~~itG~~i 278 (346)
T 3kvo_A 203 YTIAKYGMSMYVLGMAEEFK-GEIAVNALWPKTAIHTAAMDM---LGGPGIESQCRKVDIIADAAYSIFQKPKSFTGNFV 278 (346)
T ss_dssp HHHHHHHHHHHHHHHHHHTT-TTCEEEEEECSBCBCCHHHHH---HCC--CGGGCBCTHHHHHHHHHHHTSCTTCCSCEE
T ss_pred HHHHHHHHHHHHHHHHHHhc-CCcEEEEEeCCCccccHHHHh---hccccccccCCCHHHHHHHHHHHHhcCCCCCceEE
Confidence 4433221 11111112233 689999999996332211000 0011122346789999999999998733 356766
Q ss_pred EEecC
Q 021928 281 EVVNG 285 (305)
Q Consensus 281 ~v~~g 285 (305)
+.+|
T Consensus 279 -vdgg 282 (346)
T 3kvo_A 279 -IDEN 282 (346)
T ss_dssp -EHHH
T ss_pred -ECCc
Confidence 6544
|
| >2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A* | Back alignment and structure |
|---|
Probab=99.64 E-value=3.3e-15 Score=134.04 Aligned_cols=190 Identities=13% Similarity=0.013 Sum_probs=124.3
Q ss_pred CCCEEEEEcCC--ChHHHHHHHHHHhCCCeEEEEEcCcc---hhhhh--cCCCcEEeecCCCCHHHHHHHhc-------C
Q 021928 97 ARDAVLVTDGD--SDIGQMVILSLIVKRTRIKALVKDKR---NAMES--FGTYVESMAGDASNKKFLKTALR-------G 162 (305)
Q Consensus 97 ~~~~vlVtGat--G~iG~~l~~~L~~~g~~V~~~~R~~~---~~~~~--~~~~v~~v~~D~~d~~~~~~~~~-------~ 162 (305)
.+|+|+||||+ |+||++++++|+++|++|++++|+++ ...+. ....+.++.+|++|.+++.++++ +
T Consensus 5 ~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 84 (275)
T 2pd4_A 5 KGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLGS 84 (275)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTSC
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 35899999999 99999999999999999999999875 11111 11247899999999988887765 6
Q ss_pred ccEEEECCcc--------h----------------------Hhhhhhhc--CCCEEEEEcccccccCCCCcccccchHH-
Q 021928 163 VRSIICPSEG--------F----------------------ISNAGSLK--GVQHVILLSQLSVYRGSGGIQALMKGNA- 209 (305)
Q Consensus 163 ~d~Vi~~~~g--------~----------------------~~~~a~~~--gv~~~V~iSS~~~~~~~~~~~~~~~~~~- 209 (305)
+|++||+++. . +..++... +-.+||++||..+..+......|..++.
T Consensus 85 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a 164 (275)
T 2pd4_A 85 LDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKYMAHYNVMGLAKAA 164 (275)
T ss_dssp EEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTTCHHHHHHHHH
T ss_pred CCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEecchhcCCCCCchhhHHHHHH
Confidence 7999988331 0 01111111 1259999999887765555545544332
Q ss_pred -HHHHHHHHHHHHhCCCCEEEEecCCcccCCCCCc-c---e--eeecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEE
Q 021928 210 -RKLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQ-G---F--QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIF 280 (305)
Q Consensus 210 -~~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~~-~---~--~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~ 280 (305)
..+.+.....+...++.++.|+||++........ . . .+........+.+++|+|++++.++.... ..|+.+
T Consensus 165 ~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dva~~~~~l~s~~~~~~tG~~~ 244 (275)
T 2pd4_A 165 LESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADFRMILKWNEINAPLRKNVSLEEVGNAGMYLLSSLSSGVSGEVH 244 (275)
T ss_dssp HHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred HHHHHHHHHHHhhhcCeEEEEEeeCccccchhhhccccHHHHHHHHhcCCcCCCCCHHHHHHHHHHHhCccccCCCCCEE
Confidence 1112222233456799999999999654321110 0 0 00001122346789999999999996533 468899
Q ss_pred EEecCC
Q 021928 281 EVVNGE 286 (305)
Q Consensus 281 ~v~~g~ 286 (305)
++.+|.
T Consensus 245 ~vdgg~ 250 (275)
T 2pd4_A 245 FVDAGY 250 (275)
T ss_dssp EESTTG
T ss_pred EECCCc
Confidence 998774
|
| >3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A* | Back alignment and structure |
|---|
Probab=99.64 E-value=4.7e-15 Score=134.61 Aligned_cols=191 Identities=8% Similarity=-0.009 Sum_probs=126.5
Q ss_pred CCCCEEEEEcCCCh--HHHHHHHHHHhCCCeEEEEEcCcchh---hhh--cCCCcEEeecCCCCHHHHHHHhc-------
Q 021928 96 EARDAVLVTDGDSD--IGQMVILSLIVKRTRIKALVKDKRNA---MES--FGTYVESMAGDASNKKFLKTALR------- 161 (305)
Q Consensus 96 ~~~~~vlVtGatG~--iG~~l~~~L~~~g~~V~~~~R~~~~~---~~~--~~~~v~~v~~D~~d~~~~~~~~~------- 161 (305)
..+|+++||||+|+ ||++++++|+++|++|+++.|++... .+. ....+.++.+|++|.++++++++
T Consensus 29 l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 108 (293)
T 3grk_A 29 LQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEELGAFVAGHCDVADAASIDAVFETLEKKWG 108 (293)
T ss_dssp TTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred CCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcC
Confidence 45689999999977 99999999999999999999985321 111 11358899999999988887775
Q ss_pred CccEEEECCcc--------h----------------------Hhhhhhh--cCCCEEEEEcccccccCCCCcccccchHH
Q 021928 162 GVRSIICPSEG--------F----------------------ISNAGSL--KGVQHVILLSQLSVYRGSGGIQALMKGNA 209 (305)
Q Consensus 162 ~~d~Vi~~~~g--------~----------------------~~~~a~~--~gv~~~V~iSS~~~~~~~~~~~~~~~~~~ 209 (305)
.+|++|++++. . +..++.. ..-.+||++||..++.+......|..++.
T Consensus 109 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~~~~~Y~asKa 188 (293)
T 3grk_A 109 KLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYYGAEKVMPNYNVMGVAKA 188 (293)
T ss_dssp CCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECGGGTSBCTTTTHHHHHHH
T ss_pred CCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeehhhccCCCchHHHHHHHH
Confidence 68999988431 0 0111111 12459999999988776555555544332
Q ss_pred --HHHHHHHHHHHHhCCCCEEEEecCCcccCCCCCc-c--e---eeecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcE
Q 021928 210 --RKLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQ-G--F---QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLI 279 (305)
Q Consensus 210 --~~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~~-~--~---~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~ 279 (305)
..+.+.....+...++.++.|+||++........ . . .+........+.+++|+|++++.++.+.. ..|++
T Consensus 189 a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~itG~~ 268 (293)
T 3grk_A 189 ALEASVKYLAVDLGPQNIRVNAISAGPIKTLAASGIGDFRYILKWNEYNAPLRRTVTIDEVGDVGLYFLSDLSRSVTGEV 268 (293)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECCCCC------CCHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred HHHHHHHHHHHHHhHhCCEEEEEecCCCcchhhhcccchHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCccccCCcceE
Confidence 1122222233456799999999999654321110 0 0 00011222456789999999999997543 46899
Q ss_pred EEEecCC
Q 021928 280 FEVVNGE 286 (305)
Q Consensus 280 ~~v~~g~ 286 (305)
+++.+|.
T Consensus 269 i~vdGG~ 275 (293)
T 3grk_A 269 HHADSGY 275 (293)
T ss_dssp EEESTTG
T ss_pred EEECCCc
Confidence 9999875
|
| >3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=99.64 E-value=2.1e-15 Score=131.07 Aligned_cols=175 Identities=15% Similarity=0.128 Sum_probs=118.0
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhc---CccEEEECCcch
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR---GVRSIICPSEGF 173 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~---~~d~Vi~~~~g~ 173 (305)
.+|+++||||+|+||++++++|+++|++|+++.|+.+ +|++|.++++++++ .+|++|++++..
T Consensus 5 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~--------------~D~~~~~~v~~~~~~~g~id~lv~nAg~~ 70 (223)
T 3uce_A 5 DKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG--------------LDISDEKSVYHYFETIGAFDHLIVTAGSY 70 (223)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT--------------CCTTCHHHHHHHHHHHCSEEEEEECCCCC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc--------------cCCCCHHHHHHHHHHhCCCCEEEECCCCC
Confidence 4589999999999999999999999999999999863 89999998888775 689999884310
Q ss_pred ---------------------------Hhhhhhhc--CCCEEEEEcccccccCCCCcccccchHHHHHHHHHHHHHHh-C
Q 021928 174 ---------------------------ISNAGSLK--GVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMA-S 223 (305)
Q Consensus 174 ---------------------------~~~~a~~~--gv~~~V~iSS~~~~~~~~~~~~~~~~~~~~~~~~aE~~l~~-~ 223 (305)
+..++... .-.+||++||..++.+......|...+..... ..+.+-++ .
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~asK~a~~~-~~~~la~e~~ 149 (223)
T 3uce_A 71 APAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGMLSRKVVANTYVKAAINAAIEA-TTKVLAKELA 149 (223)
T ss_dssp CCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCGGGTSCCTTCHHHHHHHHHHHH-HHHHHHHHHT
T ss_pred CCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecchhhccCCCCchHHHHHHHHHHH-HHHHHHHhhc
Confidence 11111111 12489999999888766655555443321110 11111112 2
Q ss_pred CCCEEEEecCCcccCCCCC--cce------eeecCCCCCCccCHHHHHHHHHHHhhCCCCCCcEEEEecCC
Q 021928 224 GIPYTIIRTGVLQNTPGGK--QGF------QFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVVNGE 286 (305)
Q Consensus 224 gi~~tilRPg~l~~~~~~~--~~~------~~~~~~~~~~~Is~~DvA~~iv~~l~~~~~~~~~~~v~~g~ 286 (305)
.++++.++||++....... ... .+........+.+++|+|++++.++..+...|+++++.+|.
T Consensus 150 ~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~~~~~~tG~~i~vdgG~ 220 (223)
T 3uce_A 150 PIRVNAISPGLTKTEAYKGMNADDRDAMYQRTQSHLPVGKVGEASDIAMAYLFAIQNSYMTGTVIDVDGGA 220 (223)
T ss_dssp TSEEEEEEECSBCSGGGTTSCHHHHHHHHHHHHHHSTTCSCBCHHHHHHHHHHHHHCTTCCSCEEEESTTG
T ss_pred CcEEEEEEeCCCcchhhhhcchhhHHHHHHHHhhcCCCCCccCHHHHHHHHHHHccCCCCCCcEEEecCCe
Confidence 2999999999964322111 000 00111223456789999999999998766789999999774
|
| >2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A* | Back alignment and structure |
|---|
Probab=99.63 E-value=7.1e-15 Score=142.59 Aligned_cols=177 Identities=16% Similarity=0.213 Sum_probs=122.5
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCe-EEEEEcCcchh---------hhhcCCCcEEeecCCCCHHHHHHHhcCc--
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTR-IKALVKDKRNA---------MESFGTYVESMAGDASNKKFLKTALRGV-- 163 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~-V~~~~R~~~~~---------~~~~~~~v~~v~~D~~d~~~~~~~~~~~-- 163 (305)
.++++||||||+|+||++++++|+++|++ |++++|+.... .+..+.++.++.+|++|.+++.++++.+
T Consensus 224 ~~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~i~~ 303 (486)
T 2fr1_A 224 KPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGD 303 (486)
T ss_dssp CCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCT
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHHHHHh
Confidence 35689999999999999999999999995 99999986421 1123457899999999999999988765
Q ss_pred ----cEEEECCcc----h----------------------HhhhhhhcCCCEEEEEcccccccCCCCcccccchHHHHHH
Q 021928 164 ----RSIICPSEG----F----------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLA 213 (305)
Q Consensus 164 ----d~Vi~~~~g----~----------------------~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~~~~ 213 (305)
|.|||+++- . +.+++...+.++||++||..+..+..+...|...+. ..
T Consensus 304 ~g~ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~V~~SS~a~~~g~~g~~~Yaaaka--~l 381 (486)
T 2fr1_A 304 DVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELDLTAFVLFSSFASAFGAPGLGGYAPGNA--YL 381 (486)
T ss_dssp TSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSCCSEEEEEEEHHHHTCCTTCTTTHHHHH--HH
T ss_pred cCCCcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCcCCCCEEEEEcChHhcCCCCCCHHHHHHHH--HH
Confidence 999998431 0 233455567899999999877665555555544332 22
Q ss_pred HHHHHHHHhCCCCEEEEecCCcccC-CCCCcceeeecCCCCCCccCHHHHHHHHHHHhhCCCC
Q 021928 214 EQDESMLMASGIPYTIIRTGVLQNT-PGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQ 275 (305)
Q Consensus 214 ~~aE~~l~~~gi~~tilRPg~l~~~-~~~~~~~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~~ 275 (305)
......++..++++++|+||.+.+. ..... ..-.........++.+|+++++..++..+..
T Consensus 382 ~~la~~~~~~gi~v~~i~pG~~~~~gm~~~~-~~~~~~~~g~~~i~~e~~a~~l~~~l~~~~~ 443 (486)
T 2fr1_A 382 DGLAQQRRSDGLPATAVAWGTWAGSGMAEGP-VADRFRRHGVIEMPPETACRALQNALDRAEV 443 (486)
T ss_dssp HHHHHHHHHTTCCCEEEEECCBC-------------CTTTTEECBCHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHhcCCeEEEEECCeeCCCcccchh-HHHHHHhcCCCCCCHHHHHHHHHHHHhCCCC
Confidence 2223445678999999999986432 11110 0000111234579999999999999986543
|
| >4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=99.63 E-value=1.8e-15 Score=134.89 Aligned_cols=193 Identities=13% Similarity=0.045 Sum_probs=133.2
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh------hcCCCcEEeecCCCCHHHHHHHhc-------
Q 021928 95 PEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTALR------- 161 (305)
Q Consensus 95 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~------~~~~~v~~v~~D~~d~~~~~~~~~------- 161 (305)
+..+|+++||||+++||++++++|+++|++|++..|+++...+ ..+.++..+.+|++|.++++++++
T Consensus 6 ~L~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G 85 (255)
T 4g81_D 6 DLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEGI 85 (255)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHTTC
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHCC
Confidence 3456999999999999999999999999999999999766332 234578899999999988876654
Q ss_pred CccEEEECCcch------------------------------Hhhhh-hhcCCCEEEEEcccccccCCCCcccccchHH-
Q 021928 162 GVRSIICPSEGF------------------------------ISNAG-SLKGVQHVILLSQLSVYRGSGGIQALMKGNA- 209 (305)
Q Consensus 162 ~~d~Vi~~~~g~------------------------------~~~~a-~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~- 209 (305)
.+|++|++++.. ....+ ++.+-.+||++||..+..+.+....|..++.
T Consensus 86 ~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~~~~~~~~~Y~asKaa 165 (255)
T 4g81_D 86 HVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQAARPTVAPYTAAKGG 165 (255)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSBCTTCHHHHHHHHH
T ss_pred CCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhcCCCCCchhHHHHHHH
Confidence 579999874410 01112 2345579999999988877666666655432
Q ss_pred -HHHHHHHHHHHHhCCCCEEEEecCCcccCCC----CCcce--eeecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEE
Q 021928 210 -RKLAEQDESMLMASGIPYTIIRTGVLQNTPG----GKQGF--QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIF 280 (305)
Q Consensus 210 -~~~~~~aE~~l~~~gi~~tilRPg~l~~~~~----~~~~~--~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~ 280 (305)
..+.+.....+...+|++..|.||++..... ..+.. .+....+..-+..++|+|.+++.++.+.. -.|+++
T Consensus 166 l~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~Pl~R~g~pediA~~v~fL~S~~a~~iTG~~i 245 (255)
T 4g81_D 166 IKMLTCSMAAEWAQFNIQTNAIGPGYILTDMNTALIEDKQFDSWVKSSTPSQRWGRPEELIGTAIFLSSKASDYINGQII 245 (255)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGHHHHTCHHHHHHHHHHSTTCSCBCGGGGHHHHHHHHSGGGTTCCSCEE
T ss_pred HHHHHHHHHHHhcccCeEEEEEeeCCCCCchhhcccCCHHHHHHHHhCCCCCCCcCHHHHHHHHHHHhCchhCCCcCCEE
Confidence 2233334445667899999999999643211 00000 00011122345678999999999986433 468999
Q ss_pred EEecCCc
Q 021928 281 EVVNGEE 287 (305)
Q Consensus 281 ~v~~g~~ 287 (305)
.|.+|-.
T Consensus 246 ~VDGG~~ 252 (255)
T 4g81_D 246 YVDGGWL 252 (255)
T ss_dssp EESTTGG
T ss_pred EECCCeE
Confidence 9988753
|
| >4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A | Back alignment and structure |
|---|
Probab=99.63 E-value=1.5e-14 Score=128.71 Aligned_cols=192 Identities=10% Similarity=0.046 Sum_probs=128.4
Q ss_pred cCCCCEEEEEcCCC--hHHHHHHHHHHhCCCeEEEEEcCcchhhh------hc-CCCcEEeecCCCCHHHHHHHhc----
Q 021928 95 PEARDAVLVTDGDS--DIGQMVILSLIVKRTRIKALVKDKRNAME------SF-GTYVESMAGDASNKKFLKTALR---- 161 (305)
Q Consensus 95 ~~~~~~vlVtGatG--~iG~~l~~~L~~~g~~V~~~~R~~~~~~~------~~-~~~v~~v~~D~~d~~~~~~~~~---- 161 (305)
+..+|+++||||+| +||++++++|+++|++|++..|+++...+ .. +.++.++++|++|.+++.++++
T Consensus 3 ~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 82 (256)
T 4fs3_A 3 NLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIGK 82 (256)
T ss_dssp CCTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 34579999999987 89999999999999999999999765321 12 3478999999999888776553
Q ss_pred ---CccEEEECCcc-----h---Hh----------------------hhhh--hcCCCEEEEEcccccccCCCCcccccc
Q 021928 162 ---GVRSIICPSEG-----F---IS----------------------NAGS--LKGVQHVILLSQLSVYRGSGGIQALMK 206 (305)
Q Consensus 162 ---~~d~Vi~~~~g-----~---~~----------------------~~a~--~~gv~~~V~iSS~~~~~~~~~~~~~~~ 206 (305)
.+|++|++++. . .. ..+. ..+-.+||++||.....+.+....|..
T Consensus 83 ~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnisS~~~~~~~~~~~~Y~a 162 (256)
T 4fs3_A 83 DVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYLGGEFAVQNYNVMGV 162 (256)
T ss_dssp HHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEECGGGTSCCTTTHHHHH
T ss_pred HhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEeccccccCcccchhhHH
Confidence 67999987331 0 00 0010 112358999999988776666666654
Q ss_pred hHH--HHHHHHHHHHHHhCCCCEEEEecCCcccCCCCC----cce--eeecCCCCCCccCHHHHHHHHHHHhhCCC--CC
Q 021928 207 GNA--RKLAEQDESMLMASGIPYTIIRTGVLQNTPGGK----QGF--QFEEGCAANGSLSKEDAAFICVEALESIP--QT 276 (305)
Q Consensus 207 ~~~--~~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~----~~~--~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~ 276 (305)
++. ..+.+.....+...||++..|.||++....... ... .+....+..-+..++|||.+++.++.+.. -.
T Consensus 163 sKaal~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~Pl~R~g~peevA~~v~fL~Sd~a~~iT 242 (256)
T 4fs3_A 163 AKASLEANVKYLALDLGPDNIRVNAISAGPIRTLSAKGVGGFNTILKEIKERAPLKRNVDQVEVGKTAAYLLSDLSSGVT 242 (256)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGGTTCC
T ss_pred HHHHHHHHHHHHHHHhCccCeEEEEEecCCCCChhhhhccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCcc
Confidence 432 222233334466789999999999964321110 000 00011122345689999999999996533 46
Q ss_pred CcEEEEecCC
Q 021928 277 GLIFEVVNGE 286 (305)
Q Consensus 277 ~~~~~v~~g~ 286 (305)
|+++.|.+|-
T Consensus 243 G~~i~VDGG~ 252 (256)
T 4fs3_A 243 GENIHVDSGF 252 (256)
T ss_dssp SCEEEESTTG
T ss_pred CCEEEECcCH
Confidence 8999998874
|
| >3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A | Back alignment and structure |
|---|
Probab=99.62 E-value=3.2e-15 Score=133.18 Aligned_cols=191 Identities=8% Similarity=0.024 Sum_probs=125.0
Q ss_pred cCCCCEEEEEcCC--ChHHHHHHHHHHhCCCeEEEEEcCcchh-h-------hhcCCCcEEeecCCCCHHHHHHHhc---
Q 021928 95 PEARDAVLVTDGD--SDIGQMVILSLIVKRTRIKALVKDKRNA-M-------ESFGTYVESMAGDASNKKFLKTALR--- 161 (305)
Q Consensus 95 ~~~~~~vlVtGat--G~iG~~l~~~L~~~g~~V~~~~R~~~~~-~-------~~~~~~v~~v~~D~~d~~~~~~~~~--- 161 (305)
+..+++|+||||+ ++||++++++|+++|++|+++.|+.... . +..+.++.++.+|++|.++++++++
T Consensus 17 ~l~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~ 96 (267)
T 3gdg_A 17 SLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVKDVV 96 (267)
T ss_dssp CCTTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHHHHH
T ss_pred CcCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHHHHH
Confidence 3456999999999 8999999999999999999998876432 1 1235678999999999988877765
Q ss_pred ----CccEEEECCcch--------------------------Hh----hhhhhcCCCEEEEEcccccccCC--CCccccc
Q 021928 162 ----GVRSIICPSEGF--------------------------IS----NAGSLKGVQHVILLSQLSVYRGS--GGIQALM 205 (305)
Q Consensus 162 ----~~d~Vi~~~~g~--------------------------~~----~~a~~~gv~~~V~iSS~~~~~~~--~~~~~~~ 205 (305)
.+|++||+++.. +. ...++.+..+||++||..++.+. .....|.
T Consensus 97 ~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~Y~ 176 (267)
T 3gdg_A 97 ADFGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERGTGSLVITASMSGHIANFPQEQTSYN 176 (267)
T ss_dssp HHTSCCSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCSSSCCHHHH
T ss_pred HHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcCCceEEEEccccccccCCCCCCCcch
Confidence 569999884310 11 11244567899999998776543 2333444
Q ss_pred chHHHH--HHHHHHHHHHhCCCCEEEEecCCcccCCCCC-c---ceeeecCCCCCCccCHHHHHHHHHHHhhCCC--CCC
Q 021928 206 KGNARK--LAEQDESMLMASGIPYTIIRTGVLQNTPGGK-Q---GFQFEEGCAANGSLSKEDAAFICVEALESIP--QTG 277 (305)
Q Consensus 206 ~~~~~~--~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~-~---~~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~ 277 (305)
.++... +.+.....+... +.++.+.||++....... . ...+........+.+++|+|++++.++.... ..|
T Consensus 177 ~sK~a~~~~~~~la~e~~~~-i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~r~~~~~dva~~~~~l~s~~~~~itG 255 (267)
T 3gdg_A 177 VAKAGCIHMARSLANEWRDF-ARVNSISPGYIDTGLSDFVPKETQQLWHSMIPMGRDGLAKELKGAYVYFASDASTYTTG 255 (267)
T ss_dssp HHHHHHHHHHHHHHHHTTTT-CEEEEEEECCEECSCGGGSCHHHHHHHHTTSTTSSCEETHHHHHHHHHHHSTTCTTCCS
T ss_pred HHHHHHHHHHHHHHHHhccC-cEEEEEECCccccchhhhCCHHHHHHHHhcCCCCCCcCHHHHHhHhheeecCccccccC
Confidence 332211 111111112223 889999999965332210 0 0001112233456788999999999997543 468
Q ss_pred cEEEEecCC
Q 021928 278 LIFEVVNGE 286 (305)
Q Consensus 278 ~~~~v~~g~ 286 (305)
+++++.+|.
T Consensus 256 ~~i~vdgG~ 264 (267)
T 3gdg_A 256 ADLLIDGGY 264 (267)
T ss_dssp CEEEESTTG
T ss_pred CEEEECCce
Confidence 999998774
|
| >1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* | Back alignment and structure |
|---|
Probab=99.62 E-value=4.4e-15 Score=131.74 Aligned_cols=187 Identities=13% Similarity=0.057 Sum_probs=119.4
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh-----cCCCcEEeecCCCCHHHHH----HHhcCccEEEE
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-----FGTYVESMAGDASNKKFLK----TALRGVRSIIC 168 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~-----~~~~v~~v~~D~~d~~~~~----~~~~~~d~Vi~ 168 (305)
||+++||||+|+||++++++|+++|++|++++|++++..+. .+.++..+ |..+.+.+. +.+.++|++||
T Consensus 1 Mk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~--d~~~v~~~~~~~~~~~g~iD~lv~ 78 (254)
T 1zmt_A 1 MSTAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAETYPQLKPM--SEQEPAELIEAVTSAYGQVDVLVS 78 (254)
T ss_dssp -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHCTTSEEC--CCCSHHHHHHHHHHHHSCCCEEEE
T ss_pred CeEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCcEEEE--CHHHHHHHHHHHHHHhCCCCEEEE
Confidence 47899999999999999999999999999999987653221 13334444 666644332 33457899998
Q ss_pred CCcch---------------------------H----hhhhhhcCCCEEEEEcccccccCCCCcccccchHH--HHHHHH
Q 021928 169 PSEGF---------------------------I----SNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA--RKLAEQ 215 (305)
Q Consensus 169 ~~~g~---------------------------~----~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~--~~~~~~ 215 (305)
+++.. + ...+++.+..+||++||..++.+......|..++. ..+.+.
T Consensus 79 nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~ 158 (254)
T 1zmt_A 79 NDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPWKELSTYTSARAGACTLANA 158 (254)
T ss_dssp ECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCCTTCHHHHHHHHHHHHHHHH
T ss_pred CCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCcccccCCCCchHHHHHHHHHHHHHHH
Confidence 73210 0 11123456789999999988766555555544332 112222
Q ss_pred HHHHHHhCCCCEEEEecCCcccCC---------CCC-cce--eeecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEEE
Q 021928 216 DESMLMASGIPYTIIRTGVLQNTP---------GGK-QGF--QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFE 281 (305)
Q Consensus 216 aE~~l~~~gi~~tilRPg~l~~~~---------~~~-~~~--~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~ 281 (305)
....+...++.++.|+||++.... ... ... .+........+.+++|+|++++.++..+. ..|+.+.
T Consensus 159 la~e~~~~gi~v~~v~PG~v~~~~~~~~~~T~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~s~~~~~~tG~~~~ 238 (254)
T 1zmt_A 159 LSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQRLGTQKELGELVAFLASGSCDYLTGQVFW 238 (254)
T ss_dssp HHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHHSSSSSCBCHHHHHHHHHHHHTTSCGGGTTCEEE
T ss_pred HHHHhhhcCcEEEEEecCccccccccccCCCcccccChHHHHHHhccCCCCCCcCHHHHHHHHHHHhCcccCCccCCEEE
Confidence 223345679999999999972110 000 000 00001122346799999999999997654 3689999
Q ss_pred EecCC
Q 021928 282 VVNGE 286 (305)
Q Consensus 282 v~~g~ 286 (305)
+.+|.
T Consensus 239 vdgG~ 243 (254)
T 1zmt_A 239 LAGGF 243 (254)
T ss_dssp ESTTC
T ss_pred ECCCc
Confidence 98875
|
| >4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.61 E-value=1.4e-14 Score=130.34 Aligned_cols=188 Identities=16% Similarity=0.108 Sum_probs=128.0
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh---hcCCCcEEeecCCCCHHHHHHHhc-------CccEE
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALR-------GVRSI 166 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~---~~~~~v~~v~~D~~d~~~~~~~~~-------~~d~V 166 (305)
.+|+++||||+++||++++++|++.|++|++..|+.++..+ .++.++..+.+|++|.++++++++ .+|++
T Consensus 28 ~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiL 107 (273)
T 4fgs_A 28 NAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGGGAVGIQADSANLAELDRLYEKVKAEAGRIDVL 107 (273)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCEEEE
T ss_pred CCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 45999999999999999999999999999999999876433 346678999999999888776654 57999
Q ss_pred EECCcch------------------------------HhhhhhhcCCCEEEEEcccccccCCCCcccccchHH--HHHHH
Q 021928 167 ICPSEGF------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA--RKLAE 214 (305)
Q Consensus 167 i~~~~g~------------------------------~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~--~~~~~ 214 (305)
|++++.. .....++. .++|++||..+..+.+....|..++. ..+.+
T Consensus 108 VNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~--G~IInisS~~~~~~~~~~~~Y~asKaav~~ltr 185 (273)
T 4fgs_A 108 FVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARG--SSVVLTGSTAGSTGTPAFSVYAASKAALRSFAR 185 (273)
T ss_dssp EECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEE--EEEEEECCGGGGSCCTTCHHHHHHHHHHHHHHH
T ss_pred EECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhC--CeEEEEeehhhccCCCCchHHHHHHHHHHHHHH
Confidence 9874310 01112222 48999999988777666666655432 22222
Q ss_pred HHHHHHHhCCCCEEEEecCCcccCCC-C---Cccee-------eecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEEE
Q 021928 215 QDESMLMASGIPYTIIRTGVLQNTPG-G---KQGFQ-------FEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFE 281 (305)
Q Consensus 215 ~aE~~l~~~gi~~tilRPg~l~~~~~-~---~~~~~-------~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~ 281 (305)
.....+...||++..|.||++..... . ..... +....+..-+-.++|+|.+++.++.+.. -.|+++.
T Consensus 186 ~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~peeiA~~v~FLaSd~a~~iTG~~i~ 265 (273)
T 4fgs_A 186 NWILDLKDRGIRINTLSPGPTETTGLVELAGKDPVQQQGLLNALAAQVPMGRVGRAEEVAAAALFLASDDSSFVTGAELF 265 (273)
T ss_dssp HHHHHTTTSCEEEEEEEECSBCC---------CHHHHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred HHHHHhcccCeEEEEEeeCCCCChhHHHhhccCchhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCccCCeEe
Confidence 23334556899999999999643211 0 00000 0011122335578999999999996543 3689999
Q ss_pred EecCC
Q 021928 282 VVNGE 286 (305)
Q Consensus 282 v~~g~ 286 (305)
|.+|-
T Consensus 266 VDGG~ 270 (273)
T 4fgs_A 266 VDGGS 270 (273)
T ss_dssp ESTTT
T ss_pred ECcCh
Confidence 98774
|
| >1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... | Back alignment and structure |
|---|
Probab=99.60 E-value=1.4e-14 Score=133.53 Aligned_cols=177 Identities=17% Similarity=0.186 Sum_probs=116.0
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhh---hh---------cCCCcEEeecCCCCHHHHHHHhcC---
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM---ES---------FGTYVESMAGDASNKKFLKTALRG--- 162 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~---~~---------~~~~v~~v~~D~~d~~~~~~~~~~--- 162 (305)
+++|+||||+|+||++++++|+++|++|+++.|+..... +. .+.++.++.+|++|.+++.++++.
T Consensus 2 ~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 81 (327)
T 1jtv_A 2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTE 81 (327)
T ss_dssp CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTT
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHHhc
Confidence 479999999999999999999999999998887654321 11 124689999999999999988875
Q ss_pred --ccEEEECCcc-----h---------------------Hhh----hhhhcCCCEEEEEcccccccCCCCcccccchHH-
Q 021928 163 --VRSIICPSEG-----F---------------------ISN----AGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA- 209 (305)
Q Consensus 163 --~d~Vi~~~~g-----~---------------------~~~----~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~- 209 (305)
+|++||+++- . +.. .+++.+.++||++||..++.+......|..++.
T Consensus 82 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~IV~isS~~~~~~~~~~~~Y~aSK~a 161 (327)
T 1jtv_A 82 GRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFA 161 (327)
T ss_dssp SCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCCTTCHHHHHHHHH
T ss_pred CCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCcccccCCCCChHHHHHHHH
Confidence 7999988431 0 111 134457789999999988766555555544332
Q ss_pred -HHHHHHHHHHHHhCCCCEEEEecCCcccCCCCCc-ce---eeecCCC-----------------CCCccCHHHHHHHHH
Q 021928 210 -RKLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQ-GF---QFEEGCA-----------------ANGSLSKEDAAFICV 267 (305)
Q Consensus 210 -~~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~~-~~---~~~~~~~-----------------~~~~Is~~DvA~~iv 267 (305)
..+.+.....+...++.+++|+||++........ .. .+...+. ....++++|+|++++
T Consensus 162 ~~~~~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~i~ 241 (327)
T 1jtv_A 162 LEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFREAAQNPEEVAEVFL 241 (327)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHCBCHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhcCcEEEEEEeCcccChHHhhhhhcchhhhccCCHHHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHH
Confidence 1122222233445799999999999653321110 00 0000000 001258999999999
Q ss_pred HHhhCCC
Q 021928 268 EALESIP 274 (305)
Q Consensus 268 ~~l~~~~ 274 (305)
.++..+.
T Consensus 242 ~l~~~~~ 248 (327)
T 1jtv_A 242 TALRAPK 248 (327)
T ss_dssp HHHHCSS
T ss_pred HHHcCCC
Confidence 9998654
|
| >4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.60 E-value=6.7e-15 Score=130.32 Aligned_cols=192 Identities=16% Similarity=0.151 Sum_probs=132.0
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcch----hhhhcCCCcEEeecCCCCHHHHHHHhc--CccEEEE
Q 021928 95 PEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN----AMESFGTYVESMAGDASNKKFLKTALR--GVRSIIC 168 (305)
Q Consensus 95 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~----~~~~~~~~v~~v~~D~~d~~~~~~~~~--~~d~Vi~ 168 (305)
+..+|+++||||+++||+++++.|++.|++|++..|+..+ ..+..+.++..+.+|++|.++++.+++ ++|++|+
T Consensus 6 ~L~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~g~iDiLVN 85 (247)
T 4hp8_A 6 SLEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAPDETLDIIAKDGGNASALLIDFADPLAAKDSFTDAGFDILVN 85 (247)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTSTTTTTTSSTTTCCCEEEE
T ss_pred CCCCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHhCCCCEEEE
Confidence 3456999999999999999999999999999999998643 122345678999999999888877765 4799998
Q ss_pred CCcch------------------------------Hhhhhhhc-CCCEEEEEcccccccCCCCcccccchHH--HHHHHH
Q 021928 169 PSEGF------------------------------ISNAGSLK-GVQHVILLSQLSVYRGSGGIQALMKGNA--RKLAEQ 215 (305)
Q Consensus 169 ~~~g~------------------------------~~~~a~~~-gv~~~V~iSS~~~~~~~~~~~~~~~~~~--~~~~~~ 215 (305)
+++.. ....+.+. +-.+||.+||..+..+......|..++. ..+.+.
T Consensus 86 NAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~~g~~~~~~Y~asKaav~~ltr~ 165 (247)
T 4hp8_A 86 NAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQGGIRVPSYTAAKHGVAGLTKL 165 (247)
T ss_dssp CCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCSSCHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhCCCCCCChHHHHHHHHHHHHHHH
Confidence 74410 01112223 3569999999988877666666665442 223333
Q ss_pred HHHHHHhCCCCEEEEecCCcccCCC----CCcc--eeeecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEEEEecCC
Q 021928 216 DESMLMASGIPYTIIRTGVLQNTPG----GKQG--FQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVNGE 286 (305)
Q Consensus 216 aE~~l~~~gi~~tilRPg~l~~~~~----~~~~--~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~v~~g~ 286 (305)
....+...+|++..|.||++..... .... ..+....+..-+-.++|||.+++.++.+.. -.|+++.|.+|-
T Consensus 166 lA~Ela~~gIrVNaV~PG~i~T~~~~~~~~~~~~~~~~~~~~PlgR~g~peeiA~~v~fLaSd~a~~iTG~~i~VDGG~ 244 (247)
T 4hp8_A 166 LANEWAAKGINVNAIAPGYIETNNTEALRADAARNKAILERIPAGRWGHSEDIAGAAVFLSSAAADYVHGAILNVDGGW 244 (247)
T ss_dssp HHHHHGGGTEEEEEEEECSBCSGGGHHHHTSHHHHHHHHTTCTTSSCBCTHHHHHHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred HHHHHhhcCeEEEEEeeCCCCCcchhhcccCHHHHHHHHhCCCCCCCcCHHHHHHHHHHHhCchhcCCcCCeEEECccc
Confidence 4445667899999999999643211 0000 001011122334578999999999986543 368999998774
|
| >2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae} | Back alignment and structure |
|---|
Probab=99.59 E-value=1.5e-14 Score=141.11 Aligned_cols=176 Identities=17% Similarity=0.186 Sum_probs=121.0
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcchh---h------hhcCCCcEEeecCCCCHHHHHHHhcC--c
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNA---M------ESFGTYVESMAGDASNKKFLKTALRG--V 163 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~---~------~~~~~~v~~v~~D~~d~~~~~~~~~~--~ 163 (305)
.++++||||||+|+||++++++|+++|+ +|++++|+.... . +..+.++.++.+|++|.+++.++++. +
T Consensus 257 ~~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~~~l 336 (511)
T 2z5l_A 257 QPSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAERDALAALVTAYPP 336 (511)
T ss_dssp CCCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSSCHHHHHHHHHHSCC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHhcCCC
Confidence 3568999999999999999999999999 588999986421 1 11245688999999999999999875 9
Q ss_pred cEEEECCc----ch----------------------Hhhhhhhc-CCCEEEEEcccccccCCCCcccccchHHHHHHHHH
Q 021928 164 RSIICPSE----GF----------------------ISNAGSLK-GVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQD 216 (305)
Q Consensus 164 d~Vi~~~~----g~----------------------~~~~a~~~-gv~~~V~iSS~~~~~~~~~~~~~~~~~~~~~~~~a 216 (305)
|+|||+++ +. +.+++... +.++||++||..+..+..+...|...+. ..+..
T Consensus 337 d~VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~~V~~SS~a~~~g~~g~~~YaaaKa--~ld~l 414 (511)
T 2z5l_A 337 NAVFHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADIKGLDAFVLFSSVTGTWGNAGQGAYAAANA--ALDAL 414 (511)
T ss_dssp SEEEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSCTTCCCEEEEEEGGGTTCCTTBHHHHHHHH--HHHHH
T ss_pred cEEEECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeCHHhcCCCCCCHHHHHHHH--HHHHH
Confidence 99999843 10 12233334 7789999999877655555555544322 22222
Q ss_pred HHHHHhCCCCEEEEecCCcccC-CCCCcceeeecCCCCCCccCHHHHHHHHHHHhhCCC
Q 021928 217 ESMLMASGIPYTIIRTGVLQNT-PGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIP 274 (305)
Q Consensus 217 E~~l~~~gi~~tilRPg~l~~~-~~~~~~~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~ 274 (305)
-+.++..++++++|+||.+.+. ....... ..........++.+|+++++..++..+.
T Consensus 415 a~~~~~~gi~v~sv~pG~~~~tgm~~~~~~-~~~~~~g~~~l~~e~~a~~l~~al~~~~ 472 (511)
T 2z5l_A 415 AERRRAAGLPATSVAWGLWGGGGMAAGAGE-ESLSRRGLRAMDPDAAVDALLGAMGRND 472 (511)
T ss_dssp HHHHHTTTCCCEEEEECCBCSTTCCCCHHH-HHHHHHTBCCBCHHHHHHHHHHHHHHTC
T ss_pred HHHHHHcCCcEEEEECCcccCCcccccccH-HHHHhcCCCCCCHHHHHHHHHHHHhCCC
Confidence 2345678999999999987322 1111000 0000122457999999999999998654
|
| >4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A* | Back alignment and structure |
|---|
Probab=99.59 E-value=1.5e-14 Score=129.40 Aligned_cols=189 Identities=12% Similarity=0.115 Sum_probs=126.9
Q ss_pred CcCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhc-------CccEE
Q 021928 94 FPEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR-------GVRSI 166 (305)
Q Consensus 94 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~-------~~d~V 166 (305)
++..+|+++||||+++||++++++|+++|++|++..|+..+.. .....+.+|++|.++++++++ ++|++
T Consensus 7 ~~L~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~----~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDil 82 (261)
T 4h15_A 7 LNLRGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPEGL----PEELFVEADLTTKEGCAIVAEATRQRLGGVDVI 82 (261)
T ss_dssp CCCTTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCTTS----CTTTEEECCTTSHHHHHHHHHHHHHHTSSCSEE
T ss_pred cCCCCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchhCC----CcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 3556799999999999999999999999999999999864321 234578899999888766553 57999
Q ss_pred EECCcc------h--------------------------HhhhhhhcCCCEEEEEcccccccCCC-CcccccchH--HHH
Q 021928 167 ICPSEG------F--------------------------ISNAGSLKGVQHVILLSQLSVYRGSG-GIQALMKGN--ARK 211 (305)
Q Consensus 167 i~~~~g------~--------------------------~~~~a~~~gv~~~V~iSS~~~~~~~~-~~~~~~~~~--~~~ 211 (305)
|++++. . .....++.+-.+||++||.....+.+ ....|..++ ...
T Consensus 83 VnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Iv~isS~~~~~~~~~~~~~Y~asKaal~~ 162 (261)
T 4h15_A 83 VHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARGSGVVVHVTSIQRVLPLPESTTAYAAAKAALST 162 (261)
T ss_dssp EECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTTCHHHHHHHHHHHH
T ss_pred EECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcCCceEEEEEehhhccCCCCccHHHHHHHHHHHH
Confidence 987331 0 11123445667999999988765533 344444333 222
Q ss_pred HHHHHHHHHHhCCCCEEEEecCCcccCCC-----------CCc-----cee--eecCCCCCCccCHHHHHHHHHHHhhCC
Q 021928 212 LAEQDESMLMASGIPYTIIRTGVLQNTPG-----------GKQ-----GFQ--FEEGCAANGSLSKEDAAFICVEALESI 273 (305)
Q Consensus 212 ~~~~aE~~l~~~gi~~tilRPg~l~~~~~-----------~~~-----~~~--~~~~~~~~~~Is~~DvA~~iv~~l~~~ 273 (305)
+.+.....+...||++..|.||++..... ... ... .....+..-+..++|||++++.++.+.
T Consensus 163 lt~~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~peevA~~v~fLaS~~ 242 (261)
T 4h15_A 163 YSKAMSKEVSPKGVRVVRVSPGWIETEASVRLAERLAKQAGTDLEGGKKIIMDGLGGIPLGRPAKPEEVANLIAFLASDR 242 (261)
T ss_dssp HHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTCCTTSSCBCHHHHHHHHHHHHSGG
T ss_pred HHHHHHHHhhhhCeEEEEEeCCCcCCcchhhhhHHHHHhhccchhhHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHhCch
Confidence 23334445667899999999999643210 000 000 001112234568999999999999643
Q ss_pred C--CCCcEEEEecCC
Q 021928 274 P--QTGLIFEVVNGE 286 (305)
Q Consensus 274 ~--~~~~~~~v~~g~ 286 (305)
. -.|+++.|.+|-
T Consensus 243 a~~itG~~i~VDGG~ 257 (261)
T 4h15_A 243 AASITGAEYTIDGGT 257 (261)
T ss_dssp GTTCCSCEEEESTTC
T ss_pred hcCccCcEEEECCcC
Confidence 3 368999999875
|
| >1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} | Back alignment and structure |
|---|
Probab=99.57 E-value=3.4e-15 Score=131.63 Aligned_cols=187 Identities=12% Similarity=0.017 Sum_probs=117.1
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEE-E--cCcchhhhhcC--CCcEEeecCCCCHHHH----HHHhcCccEEEE
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKAL-V--KDKRNAMESFG--TYVESMAGDASNKKFL----KTALRGVRSIIC 168 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~-~--R~~~~~~~~~~--~~v~~v~~D~~d~~~~----~~~~~~~d~Vi~ 168 (305)
+|+++||||+|+||++++++|+++|++|+++ . |++++..+... .+.++. |..+.+.+ .+.+.++|++||
T Consensus 1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~g~iD~lv~ 78 (244)
T 1zmo_A 1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESENPGTIAL--AEQKPERLVDATLQHGEAIDTIVS 78 (244)
T ss_dssp -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHSTTEEEC--CCCCGGGHHHHHGGGSSCEEEEEE
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHHhCCCccc--CHHHHHHHHHHHHHHcCCCCEEEE
Confidence 3789999999999999999999999999999 6 98765432211 123332 44443322 223347899998
Q ss_pred CCc-------ch----------------------Hh----hhhhhcCCCEEEEEcccccccCCCCcccccchHHH--HHH
Q 021928 169 PSE-------GF----------------------IS----NAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--KLA 213 (305)
Q Consensus 169 ~~~-------g~----------------------~~----~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~--~~~ 213 (305)
+++ +. +. ..+++.+..+||++||..++.+......|..++.. .+.
T Consensus 79 ~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~ 158 (244)
T 1zmo_A 79 NDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAGGASVIFITSSVGKKPLAYNPLYGPARAATVALV 158 (244)
T ss_dssp CCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTCTTHHHHHHHHHHHH
T ss_pred CCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhCCCCCCchHHHHHHHHHHHHH
Confidence 832 10 00 11234567899999999887765555555443321 112
Q ss_pred HHHHHHHHhCCCCEEEEecCCcccCCC---CC---cce--eeec-CCCCCCccCHHHHHHHHHHHhhCCC--CCCcEEEE
Q 021928 214 EQDESMLMASGIPYTIIRTGVLQNTPG---GK---QGF--QFEE-GCAANGSLSKEDAAFICVEALESIP--QTGLIFEV 282 (305)
Q Consensus 214 ~~aE~~l~~~gi~~tilRPg~l~~~~~---~~---~~~--~~~~-~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~v 282 (305)
+.....+...++.++.|+||++..... .. ... .+.. ......+.+++|+|++++.++.... ..|+.+.+
T Consensus 159 ~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pe~vA~~v~~l~s~~~~~~tG~~i~v 238 (244)
T 1zmo_A 159 ESAAKTLSRDGILLYAIGPNFFNNPTYFPTSDWENNPELRERVDRDVPLGRLGRPDEMGALITFLASRRAAPIVGQFFAF 238 (244)
T ss_dssp HHHHHHHGGGTEEEEEEEESSBCBTTTBCHHHHHHCHHHHHHHHHHCTTCSCBCHHHHHHHHHHHHTTTTGGGTTCEEEE
T ss_pred HHHHHHHhhcCcEEEEEeeCCCcCCcccccccccchHHHHHHHhcCCCCCCCcCHHHHHHHHHHHcCccccCccCCEEEe
Confidence 222233455799999999999654322 10 000 0000 1122346789999999999997654 35889998
Q ss_pred ecCC
Q 021928 283 VNGE 286 (305)
Q Consensus 283 ~~g~ 286 (305)
.+|.
T Consensus 239 dgG~ 242 (244)
T 1zmo_A 239 TGGY 242 (244)
T ss_dssp STTC
T ss_pred CCCC
Confidence 8774
|
| >3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.57 E-value=8.7e-14 Score=125.89 Aligned_cols=75 Identities=15% Similarity=0.141 Sum_probs=61.1
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh-------cCCCcEEeecCCCCH-HHHHHHhc-------
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------FGTYVESMAGDASNK-KFLKTALR------- 161 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~-------~~~~v~~v~~D~~d~-~~~~~~~~------- 161 (305)
.+++||||||+|+||++++++|+++|++|++++|+.++..+. .+.++.++.+|++|. +++..+++
T Consensus 11 ~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~~g 90 (311)
T 3o26_A 11 KRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTHFG 90 (311)
T ss_dssp -CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHHHS
T ss_pred CCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHhCC
Confidence 468999999999999999999999999999999998653221 224689999999997 76665554
Q ss_pred CccEEEECCc
Q 021928 162 GVRSIICPSE 171 (305)
Q Consensus 162 ~~d~Vi~~~~ 171 (305)
++|++||+++
T Consensus 91 ~iD~lv~nAg 100 (311)
T 3o26_A 91 KLDILVNNAG 100 (311)
T ss_dssp SCCEEEECCC
T ss_pred CCCEEEECCc
Confidence 7899998843
|
| >3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A | Back alignment and structure |
|---|
Probab=99.56 E-value=3.1e-14 Score=136.94 Aligned_cols=190 Identities=15% Similarity=0.092 Sum_probs=125.5
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcch--hhhhc-CCCcEEeecCCCCHHHHHHHhc-------C-ccE
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN--AMESF-GTYVESMAGDASNKKFLKTALR-------G-VRS 165 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~--~~~~~-~~~v~~v~~D~~d~~~~~~~~~-------~-~d~ 165 (305)
.+++++||||+|+||++++++|+++|++|+++.|+... ..+.. ..++.++.+|++|.++++++++ + +|.
T Consensus 212 ~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~~~l~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~~~g~~id~ 291 (454)
T 3u0b_A 212 DGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAAEDLKRVADKVGGTALTLDVTADDAVDKITAHVTEHHGGKVDI 291 (454)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHTCEEEECCTTSTTHHHHHHHHHHHHSTTCCSE
T ss_pred CCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHHcCCCceE
Confidence 46899999999999999999999999999999987532 11111 1246889999999888776664 4 899
Q ss_pred EEECCcc----h----------------------Hhhhh----hhcCCCEEEEEcccccccCCCCcccccchHH--HHHH
Q 021928 166 IICPSEG----F----------------------ISNAG----SLKGVQHVILLSQLSVYRGSGGIQALMKGNA--RKLA 213 (305)
Q Consensus 166 Vi~~~~g----~----------------------~~~~a----~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~--~~~~ 213 (305)
|||+++- . +.+++ ...+..+||++||.....+..+...|...+. ..+.
T Consensus 292 lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~g~iV~iSS~a~~~g~~g~~~YaasKaal~~l~ 371 (454)
T 3u0b_A 292 LVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIAGNRGQTNYATTKAGMIGLA 371 (454)
T ss_dssp EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCTTCEEEEECCHHHHHCCTTCHHHHHHHHHHHHHH
T ss_pred EEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEEeChHhCCCCCCCHHHHHHHHHHHHHH
Confidence 9998431 0 11112 2235679999999988776666666655432 1122
Q ss_pred HHHHHHHHhCCCCEEEEecCCcccCCCCCccee----eecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEEEEecCC
Q 021928 214 EQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQ----FEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVNGE 286 (305)
Q Consensus 214 ~~aE~~l~~~gi~~tilRPg~l~~~~~~~~~~~----~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~v~~g~ 286 (305)
+.....+...+++++.|.||++........... ...........+++|+|++++.++.... ..|+++++.+|.
T Consensus 372 ~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~l~r~g~pedvA~~v~fL~s~~a~~itG~~i~vdGG~ 450 (454)
T 3u0b_A 372 EALAPVLADKGITINAVAPGFIETKMTEAIPLATREVGRRLNSLFQGGQPVDVAELIAYFASPASNAVTGNTIRVCGQA 450 (454)
T ss_dssp HHHHHHHHTTTCEEEEEEECSBCC----------CHHHHHSBTTSSCBCHHHHHHHHHHHHCGGGTTCCSCEEEESSSB
T ss_pred HHHHHHhhhcCcEEEEEEcCcccChhhhhcchhhHHHHHhhccccCCCCHHHHHHHHHHHhCCccCCCCCcEEEECCcc
Confidence 223334556899999999999653322110000 0001112334688999999999986433 468999998764
|
| >1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* | Back alignment and structure |
|---|
Probab=99.53 E-value=1.7e-14 Score=132.55 Aligned_cols=184 Identities=13% Similarity=0.059 Sum_probs=115.5
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEc---------Ccchhhhh---cCCCcEEeecCCCCHHHHHHH----
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVK---------DKRNAMES---FGTYVESMAGDASNKKFLKTA---- 159 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R---------~~~~~~~~---~~~~v~~v~~D~~d~~~~~~~---- 159 (305)
..+|+|+||||+|+||++++++|+++|++|++++| +.++..+. +......+.+|+.|.+++.++
T Consensus 7 l~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~~~~~D~~~~~~~~~~~~~~ 86 (319)
T 1gz6_A 7 FDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVKTA 86 (319)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhCCeEEEeCCCHHHHHHHHHHH
Confidence 34689999999999999999999999999999754 44332211 111111245799987655444
Q ss_pred ---hcCccEEEECCc----c-h---------------------Hh----hhhhhcCCCEEEEEcccccccCCCCcccccc
Q 021928 160 ---LRGVRSIICPSE----G-F---------------------IS----NAGSLKGVQHVILLSQLSVYRGSGGIQALMK 206 (305)
Q Consensus 160 ---~~~~d~Vi~~~~----g-~---------------------~~----~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~ 206 (305)
+..+|++||+++ . + +. ..+++.+..+||++||.....+..+...|..
T Consensus 87 ~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~grIV~vsS~~~~~~~~~~~~Y~a 166 (319)
T 1gz6_A 87 LDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNFGQANYSA 166 (319)
T ss_dssp HHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHH
T ss_pred HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCCCCCHHHHH
Confidence 347899998843 1 0 11 1124456789999999866554444445544
Q ss_pred hHHH--HHHHHHHHHHHhCCCCEEEEecCCcccCCCCCcceeeecCCCCCCccCHHHHHHHHHHHhhCCC-CCCcEEEEe
Q 021928 207 GNAR--KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIP-QTGLIFEVV 283 (305)
Q Consensus 207 ~~~~--~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~~~~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~-~~~~~~~v~ 283 (305)
++.. .+.+.....+...++.++.|+||++++. . ... . +......++++|+|.+++.++..+. ..|+.|++.
T Consensus 167 SK~a~~~~~~~la~el~~~gI~vn~v~PG~~t~~-~--~~~-~--~~~~~~~~~p~dvA~~~~~l~s~~~~~tG~~~~v~ 240 (319)
T 1gz6_A 167 AKLGLLGLANTLVIEGRKNNIHCNTIAPNAGSRM-T--ETV-M--PEDLVEALKPEYVAPLVLWLCHESCEENGGLFEVG 240 (319)
T ss_dssp HHHHHHHHHHHHHHHTGGGTEEEEEEEEECCSTT-T--GGG-S--CHHHHHHSCGGGTHHHHHHHTSTTCCCCSCEEEEE
T ss_pred HHHHHHHHHHHHHHHhcccCEEEEEEeCCCcccc-c--ccc-C--ChhhhccCCHHHHHHHHHHHhCchhhcCCCEEEEC
Confidence 3321 1112222234457999999999987321 1 110 0 0111235788999999999997654 367888876
Q ss_pred cC
Q 021928 284 NG 285 (305)
Q Consensus 284 ~g 285 (305)
+|
T Consensus 241 GG 242 (319)
T 1gz6_A 241 AG 242 (319)
T ss_dssp TT
T ss_pred CC
Confidence 54
|
| >1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* | Back alignment and structure |
|---|
Probab=99.53 E-value=1.9e-14 Score=127.84 Aligned_cols=185 Identities=12% Similarity=0.087 Sum_probs=116.7
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHh---CCCeEEEEEcCcchhhhh---c-----CCCcEEeecCCCCHHHHHHHhc----
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIV---KRTRIKALVKDKRNAMES---F-----GTYVESMAGDASNKKFLKTALR---- 161 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~---~g~~V~~~~R~~~~~~~~---~-----~~~v~~v~~D~~d~~~~~~~~~---- 161 (305)
.+|+++||||+|+||++++++|++ +|++|++++|+++...+. + +.++.++.+|++|.+++.++++
T Consensus 5 ~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 84 (259)
T 1oaa_A 5 GCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVRE 84 (259)
T ss_dssp BSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHHHHh
Confidence 358999999999999999999999 899999999997653321 1 3468899999999988876653
Q ss_pred -----Ccc--EEEECCc------c-----h------------------Hhhh----hhhc--CCCEEEEEcccccccCCC
Q 021928 162 -----GVR--SIICPSE------G-----F------------------ISNA----GSLK--GVQHVILLSQLSVYRGSG 199 (305)
Q Consensus 162 -----~~d--~Vi~~~~------g-----~------------------~~~~----a~~~--gv~~~V~iSS~~~~~~~~ 199 (305)
.+| ++||+++ . . +..+ .++. +..+||++||..++.+..
T Consensus 85 ~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~ 164 (259)
T 1oaa_A 85 LPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPYK 164 (259)
T ss_dssp SCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTSCCT
T ss_pred ccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEEcCchhcCCCC
Confidence 357 8988732 1 1 0001 1122 446899999998887655
Q ss_pred CcccccchHHHHHHHHHHHHHHh-CCCCEEEEecCCcccCCCC-------Ccce--eeecCCCCCCccCHHHHHHHHHHH
Q 021928 200 GIQALMKGNARKLAEQDESMLMA-SGIPYTIIRTGVLQNTPGG-------KQGF--QFEEGCAANGSLSKEDAAFICVEA 269 (305)
Q Consensus 200 ~~~~~~~~~~~~~~~~aE~~l~~-~gi~~tilRPg~l~~~~~~-------~~~~--~~~~~~~~~~~Is~~DvA~~iv~~ 269 (305)
....|..++..-.. ..+.+-.+ .++.++.|.||++...... .... .+........+.+++|+|++++.+
T Consensus 165 ~~~~Y~asKaa~~~-~~~~la~e~~~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l 243 (259)
T 1oaa_A 165 GWGLYCAGKAARDM-LYQVLAAEEPSVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKSDGALVDCGTSAQKLLGL 243 (259)
T ss_dssp TCHHHHHHHHHHHH-HHHHHHHHCTTEEEEEEECCSBSSHHHHHHHHHCSCHHHHHHHHHHHHTTCSBCHHHHHHHHHHH
T ss_pred CccHHHHHHHHHHH-HHHHHHhhCCCceEEEecCCCcCcchHHHHhhccCChhHHHHHHHhhhcCCcCCHHHHHHHHHHH
Confidence 55555443321111 11111112 2488999999996432110 0000 000000123467999999999999
Q ss_pred hhCCC-CCCcEEEE
Q 021928 270 LESIP-QTGLIFEV 282 (305)
Q Consensus 270 l~~~~-~~~~~~~v 282 (305)
+.... ..|+.+++
T Consensus 244 ~~~~~~itG~~i~v 257 (259)
T 1oaa_A 244 LQKDTFQSGAHVDF 257 (259)
T ss_dssp HHHCCSCTTEEEET
T ss_pred HhhccccCCcEEec
Confidence 97433 34565554
|
| >2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ... | Back alignment and structure |
|---|
Probab=99.52 E-value=7.6e-14 Score=124.73 Aligned_cols=189 Identities=10% Similarity=0.023 Sum_probs=120.8
Q ss_pred CCCEEEEEcC--CChHHHHHHHHHHhCCCeEEEEEcCcchh-h---hhcCCCcEEeecCCCCHHHHHHHhc---------
Q 021928 97 ARDAVLVTDG--DSDIGQMVILSLIVKRTRIKALVKDKRNA-M---ESFGTYVESMAGDASNKKFLKTALR--------- 161 (305)
Q Consensus 97 ~~~~vlVtGa--tG~iG~~l~~~L~~~g~~V~~~~R~~~~~-~---~~~~~~v~~v~~D~~d~~~~~~~~~--------- 161 (305)
.+|+++|||| +|+||++++++|+++|++|++++|++++. . +..+.++.++.+|++|.++++++++
T Consensus 6 ~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~ 85 (269)
T 2h7i_A 6 DGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIGAG 85 (269)
T ss_dssp TTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHCTT
T ss_pred CCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHhcCCCceEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 4589999999 99999999999999999999999987542 2 2234468899999999988887775
Q ss_pred -CccEEEECCc--c-------h----------------------Hhhhhhh--cCCCEEEEEcccccccCCCCcccccch
Q 021928 162 -GVRSIICPSE--G-------F----------------------ISNAGSL--KGVQHVILLSQLSVYRGSGGIQALMKG 207 (305)
Q Consensus 162 -~~d~Vi~~~~--g-------~----------------------~~~~a~~--~gv~~~V~iSS~~~~~~~~~~~~~~~~ 207 (305)
++|++|++++ . . +..++.. ..-.+||++||...+ +......|..+
T Consensus 86 ~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~iss~~~~-~~~~~~~Y~as 164 (269)
T 2h7i_A 86 NKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPSR-AMPAYNWMTVA 164 (269)
T ss_dssp CCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCSS-CCTTTHHHHHH
T ss_pred CCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCeEEEEcCcccc-ccCchHHHHHH
Confidence 7899998732 1 0 0011111 011589999987653 22223333332
Q ss_pred HH--HHHHHHHHHHHHhCCCCEEEEecCCcccCCC-------CCcce---------eeecCCCCC-CccCHHHHHHHHHH
Q 021928 208 NA--RKLAEQDESMLMASGIPYTIIRTGVLQNTPG-------GKQGF---------QFEEGCAAN-GSLSKEDAAFICVE 268 (305)
Q Consensus 208 ~~--~~~~~~aE~~l~~~gi~~tilRPg~l~~~~~-------~~~~~---------~~~~~~~~~-~~Is~~DvA~~iv~ 268 (305)
+. ..+.+.....+...++.++.|+||++..... ..... .+....... .+.+++|+|++++.
T Consensus 165 Kaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~rr~~~p~dvA~~v~~ 244 (269)
T 2h7i_A 165 KSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIGWNMKDATPVAKTVCA 244 (269)
T ss_dssp HHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHCTTCCCTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcccCcEEEEEecCcccchhhhccccccchhhHHHHHHHHHHhhhccCCcccCCCCHHHHHHHHHH
Confidence 21 1111222233455799999999999643210 00000 000001112 35788999999999
Q ss_pred HhhCCC--CCCcEEEEecCC
Q 021928 269 ALESIP--QTGLIFEVVNGE 286 (305)
Q Consensus 269 ~l~~~~--~~~~~~~v~~g~ 286 (305)
++.+.. ..|+.+.+.+|.
T Consensus 245 L~s~~~~~itG~~i~vdGG~ 264 (269)
T 2h7i_A 245 LLSDWLPATTGDIIYADGGA 264 (269)
T ss_dssp HHSSSCTTCCSEEEEESTTG
T ss_pred HhCchhccCcceEEEecCCe
Confidence 997543 368899988774
|
| >3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A* | Back alignment and structure |
|---|
Probab=99.45 E-value=7.7e-13 Score=128.39 Aligned_cols=176 Identities=18% Similarity=0.161 Sum_probs=120.3
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcch---h------hhhcCCCcEEeecCCCCHHHHHHHhc-----
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRN---A------MESFGTYVESMAGDASNKKFLKTALR----- 161 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~---~------~~~~~~~v~~v~~D~~d~~~~~~~~~----- 161 (305)
+++++|||||+|+||++++++|+++|+ +|+++.|+... . .+..+.++.++.+|++|.+++.++++
T Consensus 238 ~~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~ 317 (496)
T 3mje_A 238 VHGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAADREALAALLAELPED 317 (496)
T ss_dssp CCSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTCCTT
T ss_pred CCCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHh
Confidence 348999999999999999999999998 78888887432 1 11235578999999999999998886
Q ss_pred -CccEEEECCcch---------------------------HhhhhhhcCCCEEEEEcccccccCCCCcccccchHHHHHH
Q 021928 162 -GVRSIICPSEGF---------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLA 213 (305)
Q Consensus 162 -~~d~Vi~~~~g~---------------------------~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~~~~ 213 (305)
.+|.|||+++-. +.+++...+.++||++||.....+..+...|...+. ..
T Consensus 318 g~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~~~~~iV~~SS~a~~~g~~g~~~YaAaKa--~l 395 (496)
T 3mje_A 318 APLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADLDLDAFVLFSSGAAVWGSGGQPGYAAANA--YL 395 (496)
T ss_dssp SCEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTSCCSEEEEEEEHHHHTTCTTCHHHHHHHH--HH
T ss_pred CCCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeChHhcCCCCCcHHHHHHHH--HH
Confidence 369999884310 222344567789999999988776666666654333 22
Q ss_pred HHHHHHHHhCCCCEEEEecCCcccC-CCCCcceeeecCCCCCCccCHHHHHHHHHHHhhCCC
Q 021928 214 EQDESMLMASGIPYTIIRTGVLQNT-PGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIP 274 (305)
Q Consensus 214 ~~aE~~l~~~gi~~tilRPg~l~~~-~~~~~~~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~ 274 (305)
+..-+.++..|++++.|.||.+.+. ........-.........++.+++++++..++..+.
T Consensus 396 dala~~~~~~Gi~v~sV~pG~w~~~gm~~~~~~~~~l~~~g~~~l~pe~~~~~l~~~l~~~~ 457 (496)
T 3mje_A 396 DALAEHRRSLGLTASSVAWGTWGEVGMATDPEVHDRLVRQGVLAMEPEHALGALDQMLENDD 457 (496)
T ss_dssp HHHHHHHHHTTCCCEEEEECEESSSCC------CHHHHHTTEEEECHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHhcCCeEEEEECCcccCCccccChHHHHHHHhcCCCCCCHHHHHHHHHHHHcCCC
Confidence 2223456778999999999975432 111110000001112345799999999999997654
|
| >3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae} | Back alignment and structure |
|---|
Probab=99.41 E-value=1.6e-12 Score=127.18 Aligned_cols=177 Identities=14% Similarity=0.086 Sum_probs=115.9
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCe-EEEE-EcCcc-------------hh------hhhcCCCcEEeecCCCCHH
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTR-IKAL-VKDKR-------------NA------MESFGTYVESMAGDASNKK 154 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~-V~~~-~R~~~-------------~~------~~~~~~~v~~v~~D~~d~~ 154 (305)
.+.+++|||||+|+||.+++++|+++|++ |+++ .|++. .. .+..+.++.++.+|++|.+
T Consensus 249 ~~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~ 328 (525)
T 3qp9_A 249 QADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLTDAE 328 (525)
T ss_dssp CTTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTTSHH
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCCCHH
Confidence 35689999999999999999999999997 5566 78741 11 1123457899999999999
Q ss_pred HHHHHhcC------ccEEEECCcc----h----------------------Hhhhhhh----cC-CCEEEEEcccccccC
Q 021928 155 FLKTALRG------VRSIICPSEG----F----------------------ISNAGSL----KG-VQHVILLSQLSVYRG 197 (305)
Q Consensus 155 ~~~~~~~~------~d~Vi~~~~g----~----------------------~~~~a~~----~g-v~~~V~iSS~~~~~~ 197 (305)
++.++++. +|.|||+++- . +.+++.. .+ ..+||++||..+..+
T Consensus 329 ~v~~~~~~i~~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~SS~a~~~g 408 (525)
T 3qp9_A 329 AAARLLAGVSDAHPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPPVLVLFSSVAAIWG 408 (525)
T ss_dssp HHHHHHHTSCTTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCCEEEEEEEGGGTTC
T ss_pred HHHHHHHHHHhcCCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCEEEEECCHHHcCC
Confidence 99988864 5999998441 0 1112222 22 789999999988776
Q ss_pred CCCcccccchHHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCCcceeeecCCCCCCccCHHHHHHHHHHHhhCCC
Q 021928 198 SGGIQALMKGNARKLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIP 274 (305)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~~~~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~ 274 (305)
..+...|...+. .....-..++..+++++.|.||.+..+........-.........++.+++++++..++..+.
T Consensus 409 ~~g~~~YaaaKa--~l~~lA~~~~~~gi~v~sI~pG~~~tgm~~~~~~~~~~~~~g~~~l~pee~a~~l~~~l~~~~ 483 (525)
T 3qp9_A 409 GAGQGAYAAGTA--FLDALAGQHRADGPTVTSVAWSPWEGSRVTEGATGERLRRLGLRPLAPATALTALDTALGHGD 483 (525)
T ss_dssp CTTCHHHHHHHH--HHHHHHTSCCSSCCEEEEEEECCBTTSGGGSSHHHHHHHHTTBCCBCHHHHHHHHHHHHHHTC
T ss_pred CCCCHHHHHHHH--HHHHHHHHHHhCCCCEEEEECCccccccccchhhHHHHHhcCCCCCCHHHHHHHHHHHHhCCC
Confidence 666555544322 111111223457999999999997322110110000001122356899999999999998654
|
| >3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=99.38 E-value=8.2e-13 Score=131.55 Aligned_cols=185 Identities=12% Similarity=0.007 Sum_probs=113.3
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEc---------Ccchhhh---hcCCCcEEeecCCCCHHHHHHHhc-
Q 021928 95 PEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVK---------DKRNAME---SFGTYVESMAGDASNKKFLKTALR- 161 (305)
Q Consensus 95 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R---------~~~~~~~---~~~~~v~~v~~D~~d~~~~~~~~~- 161 (305)
+..+|+++||||+++||++++++|+++|++|++++| +.+...+ .+......+.+|+.|.+++.++++
T Consensus 16 ~l~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~D~~d~~~~~~~~~~ 95 (613)
T 3oml_A 16 RYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGEAVADYNSVIDGAKVIET 95 (613)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHTTCCEEECCCCGGGHHHHHC-
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhCCeEEEEeCCHHHHHHHHHH
Confidence 345699999999999999999999999999999987 3332211 111111223479998877776665
Q ss_pred ------CccEEEECCcch--------------------------Hh----hhhhhcCCCEEEEEcccccccCCCCccccc
Q 021928 162 ------GVRSIICPSEGF--------------------------IS----NAGSLKGVQHVILLSQLSVYRGSGGIQALM 205 (305)
Q Consensus 162 ------~~d~Vi~~~~g~--------------------------~~----~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~ 205 (305)
.+|++|++++-. +. ..+++.+..+||++||..+..+..+...|.
T Consensus 96 ~~~~~g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~~g~IV~isS~a~~~~~~~~~~Y~ 175 (613)
T 3oml_A 96 AIKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGIYGNFGQVNYT 175 (613)
T ss_dssp ---------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCHHHHHCCTTCHHHH
T ss_pred HHHHCCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCCCCCChHHH
Confidence 579999874310 11 123455667999999988776655555565
Q ss_pred chHH--HHHHHHHHHHHHhCCCCEEEEecCCcccCCCCCcceeeecCCCCCCccCHHHHHHHHHHHhhCCC-CCCcEEEE
Q 021928 206 KGNA--RKLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIP-QTGLIFEV 282 (305)
Q Consensus 206 ~~~~--~~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~~~~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~-~~~~~~~v 282 (305)
.+++ ..+.+.....+...++.+..|.||...+...... .......++++|+|.+++.++.... ..|+.+++
T Consensus 176 asKaal~~lt~~la~e~~~~gI~vn~v~Pg~~t~~~~~~~------~~~~~~~~~pedvA~~v~~L~s~~~~~tG~~i~v 249 (613)
T 3oml_A 176 AAKMGLIGLANTVAIEGARNNVLCNVIVPTAASRMTEGIL------PDILFNELKPKLIAPVVAYLCHESCEDNGSYIES 249 (613)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEEC------CCCC------CHHHHTTCCGGGTHHHHHHTTSTTCCCCSCEEEE
T ss_pred HHHHHHHHHHHHHHHHhCccCeEEEEEECCCCChhhhhcc------chhhhhcCCHHHHHHHHHHhcCCCcCCCceEEEE
Confidence 4432 1122222233456799999999997543221110 1112345688999999999987653 36788888
Q ss_pred ecC
Q 021928 283 VNG 285 (305)
Q Consensus 283 ~~g 285 (305)
.+|
T Consensus 250 dGG 252 (613)
T 3oml_A 250 AAG 252 (613)
T ss_dssp ETT
T ss_pred CCC
Confidence 765
|
| >3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ... | Back alignment and structure |
|---|
Probab=99.34 E-value=6.2e-12 Score=115.73 Aligned_cols=187 Identities=15% Similarity=0.084 Sum_probs=115.8
Q ss_pred CCEEEEEcCCC--hHHHHHHHHHHhCCCeEEEEEcCc---------chh---hhh------cCCCcEEeecCCCCH--H-
Q 021928 98 RDAVLVTDGDS--DIGQMVILSLIVKRTRIKALVKDK---------RNA---MES------FGTYVESMAGDASNK--K- 154 (305)
Q Consensus 98 ~~~vlVtGatG--~iG~~l~~~L~~~g~~V~~~~R~~---------~~~---~~~------~~~~v~~v~~D~~d~--~- 154 (305)
.|+++||||++ +||++++++|+++|++|++.+|++ ++. ... ....+.++.+|+.+. +
T Consensus 2 ~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~ 81 (329)
T 3lt0_A 2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAND 81 (329)
T ss_dssp CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTCSSGGG
T ss_pred CcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCccccccccchHHHHHHHHHHHhhcccccccccccccccccchhh
Confidence 48999999975 999999999999999999777654 111 110 112367888888765 5
Q ss_pred -----------------HHHHHh-------cCccEEEECCcc------h----------------------Hh----hhh
Q 021928 155 -----------------FLKTAL-------RGVRSIICPSEG------F----------------------IS----NAG 178 (305)
Q Consensus 155 -----------------~~~~~~-------~~~d~Vi~~~~g------~----------------------~~----~~a 178 (305)
++.+++ ..+|++|++++- . +. ..+
T Consensus 82 ~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m 161 (329)
T 3lt0_A 82 IDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIM 161 (329)
T ss_dssp CCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGE
T ss_pred hhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 544443 367999988431 0 00 111
Q ss_pred hhcCCCEEEEEcccccccCCCCcc-cccchHH--HHHHHHHHHHHHh-CCCCEEEEecCCcccCC----CCCc-------
Q 021928 179 SLKGVQHVILLSQLSVYRGSGGIQ-ALMKGNA--RKLAEQDESMLMA-SGIPYTIIRTGVLQNTP----GGKQ------- 243 (305)
Q Consensus 179 ~~~gv~~~V~iSS~~~~~~~~~~~-~~~~~~~--~~~~~~aE~~l~~-~gi~~tilRPg~l~~~~----~~~~------- 243 (305)
++. .+||++||.....+..... .|..+++ ..+.+.....+.. .++.++.|.||++.... ....
T Consensus 162 ~~~--g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~~~~~la~el~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~ 239 (329)
T 3lt0_A 162 KPQ--SSIISLTYHASQKVVPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATAINKLNNTYENNT 239 (329)
T ss_dssp EEE--EEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHTCC----------
T ss_pred hhC--CeEEEEeCccccCCCCcchHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEecceeechhHhhhhhhcccccccc
Confidence 222 6899999998876655543 5544432 1222223334555 79999999999964211 0000
Q ss_pred ------------------cee--------------------eecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEEEEe
Q 021928 244 ------------------GFQ--------------------FEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVV 283 (305)
Q Consensus 244 ------------------~~~--------------------~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~v~ 283 (305)
+.. +..........+++|+|++++.++.... ..|+.+.+.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~v~fL~s~~a~~itG~~i~vd 319 (329)
T 3lt0_A 240 NQNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPLRQKLLSTDIGSVASFLLSRESRAITGQTIYVD 319 (329)
T ss_dssp --------------------------------CHHHHHHHHHHHHSSSCSCCCHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred cccccccccccchhhcccccchhhhhhhhcccchhHHHHHHHhhcCcccCcCCHHHHHHHHHHHhCchhccccCcEEEEc
Confidence 000 0000112335688999999999996433 468999998
Q ss_pred cCC
Q 021928 284 NGE 286 (305)
Q Consensus 284 ~g~ 286 (305)
+|.
T Consensus 320 GG~ 322 (329)
T 3lt0_A 320 NGL 322 (329)
T ss_dssp TTG
T ss_pred CCe
Confidence 775
|
| >1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A* | Back alignment and structure |
|---|
Probab=99.32 E-value=6.6e-11 Score=106.95 Aligned_cols=190 Identities=12% Similarity=0.003 Sum_probs=109.9
Q ss_pred CCCEEEEEcCC--ChHHHHHHHHHHhCCCeEEEEEcCc-----------chhhh--hcCC-C----cEEeecC-------
Q 021928 97 ARDAVLVTDGD--SDIGQMVILSLIVKRTRIKALVKDK-----------RNAME--SFGT-Y----VESMAGD------- 149 (305)
Q Consensus 97 ~~~~vlVtGat--G~iG~~l~~~L~~~g~~V~~~~R~~-----------~~~~~--~~~~-~----v~~v~~D------- 149 (305)
.+|+++||||+ |+||++++++|+++|++|++++|++ ++..+ .+.. . ...+.+|
T Consensus 7 ~~k~~lVTGas~~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (297)
T 1d7o_A 7 RGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVFDNPE 86 (297)
T ss_dssp TTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTCCSGG
T ss_pred CCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEeeccccchhhhhhhhhhHhhhhhhhccccccccccccccceeccchh
Confidence 45899999999 9999999999999999999998642 11111 1110 0 1333333
Q ss_pred -CC----C--------HHHHHH-------HhcCccEEEECCc------ch----------------------Hhhhhhhc
Q 021928 150 -AS----N--------KKFLKT-------ALRGVRSIICPSE------GF----------------------ISNAGSLK 181 (305)
Q Consensus 150 -~~----d--------~~~~~~-------~~~~~d~Vi~~~~------g~----------------------~~~~a~~~ 181 (305)
+. | .+++++ .+.++|++||+++ .. +..++...
T Consensus 87 dv~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~ 166 (297)
T 1d7o_A 87 DVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPI 166 (297)
T ss_dssp GSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGG
T ss_pred hhhhhhhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 22 1 222332 3347899998843 10 01111110
Q ss_pred --CCCEEEEEcccccccCCCCc-ccccchHH--HHHHHHHHHHHH-hCCCCEEEEecCCcccCCCCCcc---ee---eec
Q 021928 182 --GVQHVILLSQLSVYRGSGGI-QALMKGNA--RKLAEQDESMLM-ASGIPYTIIRTGVLQNTPGGKQG---FQ---FEE 249 (305)
Q Consensus 182 --gv~~~V~iSS~~~~~~~~~~-~~~~~~~~--~~~~~~aE~~l~-~~gi~~tilRPg~l~~~~~~~~~---~~---~~~ 249 (305)
.-.+||++||...+.+.... ..|..++. ..+.+.....+. ..++.++.|+||++......... .. +..
T Consensus 167 m~~~g~iv~isS~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~ 246 (297)
T 1d7o_A 167 MNPGGASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGFIDTMIEYSYN 246 (297)
T ss_dssp EEEEEEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCCSHHHHHHHHHHH
T ss_pred hccCceEEEEeccccccCCCCcchHHHHHHHHHHHHHHHHHHHhCcccCcEEEEEeccccccchhhhccccHHHHHHhhc
Confidence 12689999998876654443 34544332 111222222233 37999999999996543221100 00 000
Q ss_pred CCCCCCccCHHHHHHHHHHHhhCCC--CCCcEEEEecCC
Q 021928 250 GCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVNGE 286 (305)
Q Consensus 250 ~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~v~~g~ 286 (305)
......+.+++|+|++++.++.... ..|+.+++.+|.
T Consensus 247 ~~p~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdgG~ 285 (297)
T 1d7o_A 247 NAPIQKTLTADEVGNAAAFLVSPLASAITGATIYVDNGL 285 (297)
T ss_dssp HSSSCCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred cCCCCCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCc
Confidence 1122345789999999999986532 368899998874
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=99.28 E-value=6.7e-11 Score=117.48 Aligned_cols=201 Identities=12% Similarity=0.019 Sum_probs=128.5
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCc-chhhh---hcCCCcEEeecCC-CCHHHH----HHHhcCccEE
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK-RNAME---SFGTYVESMAGDA-SNKKFL----KTALRGVRSI 166 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~-~~~~~---~~~~~v~~v~~D~-~d~~~~----~~~~~~~d~V 166 (305)
..+|+++||||+++||++++++|+++|++|++..|.. +...+ ..+..+..+.+|+ .+.+.+ .+.+..+|++
T Consensus 320 l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~~~~~~~~~~~~~~~G~iDiL 399 (604)
T 2et6_A 320 LKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKDATKTVDEIKAAGGEAWPDQHDVAKDSEAIIKNVIDKYGTIDIL 399 (604)
T ss_dssp CTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHHHSCCCEE
T ss_pred cCCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCccHHHHHHHHHhcCCeEEEEEcChHHHHHHHHHHHHHhcCCCCEE
Confidence 4468999999999999999999999999999987643 22111 1234566778888 554433 2334578999
Q ss_pred EECCcc----h--------------------------HhhhhhhcCCCEEEEEcccccccCCCCcccccchHH--HHHHH
Q 021928 167 ICPSEG----F--------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA--RKLAE 214 (305)
Q Consensus 167 i~~~~g----~--------------------------~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~--~~~~~ 214 (305)
|++++- . .....++.+-.+||++||.....+..+...|..+++ ..+.+
T Consensus 400 VnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~ag~~~~~~~~~Y~asKaal~~lt~ 479 (604)
T 2et6_A 400 VNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSGIYGNFGQANYSSSKAGILGLSK 479 (604)
T ss_dssp EECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCTTBHHHHHHHHHHHHHHH
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCCCCChhHHHHHHHHHHHHH
Confidence 988441 0 111233445579999999877665555555554432 22223
Q ss_pred HHHHHHHhCCCCEEEEecCCcccCCCCCcceeeecCCCCCCccCHHHHHHHHHHHhhCCC-CCCcEEEEecCC-------
Q 021928 215 QDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIP-QTGLIFEVVNGE------- 286 (305)
Q Consensus 215 ~aE~~l~~~gi~~tilRPg~l~~~~~~~~~~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~-~~~~~~~v~~g~------- 286 (305)
.....+...++.+..|.||..++... . . . .........++|+|.+++.++.... ..|+++.+.+|.
T Consensus 480 ~la~El~~~gIrVn~v~PG~~T~m~~--~-~-~--~~~~~~~~~pe~vA~~v~~L~s~~~~itG~~~~vdGG~~~~~~~~ 553 (604)
T 2et6_A 480 TMAIEGAKNNIKVNIVAPHAETAMTL--S-I-M--REQDKNLYHADQVAPLLVYLGTDDVPVTGETFEIGGGWIGNTRWQ 553 (604)
T ss_dssp HHHHHHGGGTEEEEEEEECCCCCC---------------CCSSCGGGTHHHHHHTTSTTCCCCSCEEEEETTEEEEEEEE
T ss_pred HHHHHhCccCeEEEEEcCCCCCcccc--c-c-C--chhhccCCCHHHHHHHHHHHhCCccCCCCcEEEECCCeeEeeeee
Confidence 33344667899999999995222111 1 0 0 0111234689999999999886543 468888887652
Q ss_pred -----------cCHHHHHHHHHHhhhh
Q 021928 287 -----------EKVSDWKKCFSRLMEK 302 (305)
Q Consensus 287 -----------~s~~d~~~~~~~l~~~ 302 (305)
.+..++.+.+.++...
T Consensus 554 ~~~~~~~~~~~~~~~~~~~~~~~i~~~ 580 (604)
T 2et6_A 554 RAKGAVSHDEHTTVEFIKEHLNEITDF 580 (604)
T ss_dssp ECCCEECCSSSCCHHHHHHHHHHHTCC
T ss_pred ccccccCCCCCCCHHHHHHHHHHHhcc
Confidence 2467777777776554
|
| >3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi} | Back alignment and structure |
|---|
Probab=99.27 E-value=2.1e-11 Score=94.29 Aligned_cols=93 Identities=22% Similarity=0.167 Sum_probs=78.2
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCC-CeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEECCcc---
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG--- 172 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~g--- 172 (305)
++++|+|+|+ |++|+.+++.|.+.| ++|+++.|++++.......++.++.+|+.+.+.+.++++++|+||++++.
T Consensus 4 ~~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~~~~~~~ 82 (118)
T 3ic5_A 4 MRWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAALAVLNRMGVATKQVDAKDEAGLAKALGGFDAVISAAPFFLT 82 (118)
T ss_dssp TCEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHHTTTCEEEECCTTCHHHHHHHTTTCSEEEECSCGGGH
T ss_pred CcCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhCCCcEEEecCCCHHHHHHHHcCCCEEEECCCchhh
Confidence 4589999999 999999999999999 99999999987765554557889999999999999999999999998553
Q ss_pred -hHhhhhhhcCCCEEEEEc
Q 021928 173 -FISNAGSLKGVQHVILLS 190 (305)
Q Consensus 173 -~~~~~a~~~gv~~~V~iS 190 (305)
.+.+++.+.++++|.+.+
T Consensus 83 ~~~~~~~~~~g~~~~~~~~ 101 (118)
T 3ic5_A 83 PIIAKAAKAAGAHYFDLTE 101 (118)
T ss_dssp HHHHHHHHHTTCEEECCCS
T ss_pred HHHHHHHHHhCCCEEEecC
Confidence 256667788887775433
|
| >2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella} | Back alignment and structure |
|---|
Probab=99.27 E-value=3.1e-11 Score=110.34 Aligned_cols=189 Identities=14% Similarity=0.086 Sum_probs=98.7
Q ss_pred CCCEEEEEcC--CChHHHHHHHHHHhCCCeEEEEEcCc-----------chhhh--------------hcCC------Cc
Q 021928 97 ARDAVLVTDG--DSDIGQMVILSLIVKRTRIKALVKDK-----------RNAME--------------SFGT------YV 143 (305)
Q Consensus 97 ~~~~vlVtGa--tG~iG~~l~~~L~~~g~~V~~~~R~~-----------~~~~~--------------~~~~------~v 143 (305)
.+|+++|||| +++||++++++|+++|++|+++.|++ ++..+ .+.. ..
T Consensus 8 ~~k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (319)
T 2ptg_A 8 RGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEKPVDLVFD 87 (319)
T ss_dssp TTCEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEECHHHHHHHHC--------------------------------CCS
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhcccccccc
Confidence 4589999999 89999999999999999999998642 11110 0000 02
Q ss_pred EEeecCC------------CC--------HHHHHH-------HhcCccEEEECCc------ch-----------------
Q 021928 144 ESMAGDA------------SN--------KKFLKT-------ALRGVRSIICPSE------GF----------------- 173 (305)
Q Consensus 144 ~~v~~D~------------~d--------~~~~~~-------~~~~~d~Vi~~~~------g~----------------- 173 (305)
.++.+|+ +| .+++.+ .+..+|++|++++ +.
T Consensus 88 ~~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~vN~ 167 (319)
T 2ptg_A 88 KIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSRKGYLAAVSSSS 167 (319)
T ss_dssp EEEECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEECCSSSSSCGGGCCHHHHHHHHHHHT
T ss_pred ccccccccccccccccchhcccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCCccccCCHHHHHHHHhHhh
Confidence 4444442 22 112332 2347899998732 10
Q ss_pred -----Hhhhhhh---cCCCEEEEEcccccccCCCCc-ccccchHH--HHHHHHHHHHHHh-CCCCEEEEecCCcccCCCC
Q 021928 174 -----ISNAGSL---KGVQHVILLSQLSVYRGSGGI-QALMKGNA--RKLAEQDESMLMA-SGIPYTIIRTGVLQNTPGG 241 (305)
Q Consensus 174 -----~~~~a~~---~gv~~~V~iSS~~~~~~~~~~-~~~~~~~~--~~~~~~aE~~l~~-~gi~~tilRPg~l~~~~~~ 241 (305)
+..++.. .+ .+||++||.....+.... ..|..++. ..+.+.....+.. .++.++.|+||++......
T Consensus 168 ~g~~~l~~~~~~~m~~~-g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~~~~ 246 (319)
T 2ptg_A 168 YSFVSLLQHFLPLMKEG-GSALALSYIASEKVIPGYGGGMSSAKAALESDCRTLAFEAGRARAVRVNCISAGPLKSRAAS 246 (319)
T ss_dssp HHHHHHHHHHGGGEEEE-EEEEEEEECC------------------THHHHHHHHHHHHHHHCCEEEEEEECCCC-----
T ss_pred HHHHHHHHHHHHHHhcC-ceEEEEeccccccccCccchhhHHHHHHHHHHHHHHHHHhccccCeeEEEEeeCCccChhhh
Confidence 0111111 12 689999998876654443 34544332 2222222233443 7999999999996432211
Q ss_pred Ccc------ee------eecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEEEEecCC
Q 021928 242 KQG------FQ------FEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVNGE 286 (305)
Q Consensus 242 ~~~------~~------~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~v~~g~ 286 (305)
... .. +........+.+++|+|++++.++.... ..|+.+.+.+|.
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~v~~L~s~~~~~itG~~i~vdGG~ 305 (319)
T 2ptg_A 247 AIGKAGDKTFIDLAIDYSEANAPLQKELESDDVGRAALFLLSPLARAVTGATLYVDNGL 305 (319)
T ss_dssp --------------------------CCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTC
T ss_pred hcccccchhhHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhCcccCCccCCEEEECCCc
Confidence 000 00 0000112345689999999999997533 468899998775
|
| >2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A* | Back alignment and structure |
|---|
Probab=99.24 E-value=2.4e-11 Score=110.96 Aligned_cols=189 Identities=15% Similarity=0.134 Sum_probs=109.7
Q ss_pred CCCEEEEEcC--CChHHHHHHHHHHhCCCeEEEEEcCcc-----------hhh--hhcCC-----CcEEeecCC------
Q 021928 97 ARDAVLVTDG--DSDIGQMVILSLIVKRTRIKALVKDKR-----------NAM--ESFGT-----YVESMAGDA------ 150 (305)
Q Consensus 97 ~~~~vlVtGa--tG~iG~~l~~~L~~~g~~V~~~~R~~~-----------~~~--~~~~~-----~v~~v~~D~------ 150 (305)
.+|+++|||| +++||++++++|+++|++|+++.|++. +.. +.... .+.++.+|+
T Consensus 8 ~gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 87 (315)
T 2o2s_A 8 RGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDEDRKLPDGSLIEFAGVYPLDAAFDKPE 87 (315)
T ss_dssp TTCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECHHHHHHHHHHHHHTTTHHHHBCTTSCBCCCSCEEECCTTCSSTT
T ss_pred CCCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEecccccchhhhhhhhhhhhhhhhhhccccccccccccccccccccc
Confidence 4589999999 899999999999999999999987531 111 11110 024444443
Q ss_pred ------CC--------HHHHHHH-------hcCccEEEECCcc------hH----------------------hhhhh-h
Q 021928 151 ------SN--------KKFLKTA-------LRGVRSIICPSEG------FI----------------------SNAGS-L 180 (305)
Q Consensus 151 ------~d--------~~~~~~~-------~~~~d~Vi~~~~g------~~----------------------~~~a~-~ 180 (305)
+| .++++++ +..+|++|++++. .+ ..++. .
T Consensus 88 ~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~ 167 (315)
T 2o2s_A 88 DVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQHFGPI 167 (315)
T ss_dssp SSCHHHHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHSTT
T ss_pred hhhhhhhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence 21 2233332 3478999988431 00 01110 0
Q ss_pred --cCCCEEEEEcccccccCCCCc-ccccchHH--HHHHHHHHHHHH-hCCCCEEEEecCCcccCC----CC--Cccee--
Q 021928 181 --KGVQHVILLSQLSVYRGSGGI-QALMKGNA--RKLAEQDESMLM-ASGIPYTIIRTGVLQNTP----GG--KQGFQ-- 246 (305)
Q Consensus 181 --~gv~~~V~iSS~~~~~~~~~~-~~~~~~~~--~~~~~~aE~~l~-~~gi~~tilRPg~l~~~~----~~--~~~~~-- 246 (305)
.+ .+||++||...+.+.... ..|..++. ..+.+.....+. ..++.++.|+||++.... .. .....
T Consensus 168 m~~~-g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~ 246 (315)
T 2o2s_A 168 MNEG-GSAVTLSYLAAERVVPGYGGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAGPLKSRAASAIGKSGEKSFIDY 246 (315)
T ss_dssp EEEE-EEEEEEEEGGGTSCCTTCCTTHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECCCCCHHHHHTTCSSSSCHHHH
T ss_pred HhcC-CEEEEEecccccccCCCccHHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEecccccchhhhhccccccchhHHH
Confidence 12 689999998877654443 24544332 112222223344 379999999999964221 10 00000
Q ss_pred ----eecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEEEEecCC
Q 021928 247 ----FEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVNGE 286 (305)
Q Consensus 247 ----~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~v~~g~ 286 (305)
+..........+++|+|++++.++.... ..|+.+.+.+|.
T Consensus 247 ~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~ 292 (315)
T 2o2s_A 247 AIDYSYNNAPLRRDLHSDDVGGAALFLLSPLARAVSGVTLYVDNGL 292 (315)
T ss_dssp HHHHHHHHSSSCCCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred HHHHHhccCCCCCCCCHHHHHHHHHHHhCchhccCcCCEEEECCCe
Confidence 0000122345689999999999997433 468899988774
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=99.14 E-value=4.4e-10 Score=111.59 Aligned_cols=183 Identities=14% Similarity=0.024 Sum_probs=111.6
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCc---------chhhh---h---cCCCcEEeecCCCCHHHH----H
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK---------RNAME---S---FGTYVESMAGDASNKKFL----K 157 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~---------~~~~~---~---~~~~v~~v~~D~~d~~~~----~ 157 (305)
.+|+++||||+++||++++++|+++|++|++..|+. +...+ . .+..+..-..|+.+.+.+ .
T Consensus 7 ~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~~~~d~~d~~~~~~~v~~~~ 86 (604)
T 2et6_A 7 KDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVAVADYNNVLDGDKIVETAV 86 (604)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHTTCEEEEECCCTTCHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhcCCeEEEEcCCHHHHHHHHHHHH
Confidence 458999999999999999999999999999987754 22111 1 122222222333332222 2
Q ss_pred HHhcCccEEEECCcc----h--------------------------HhhhhhhcCCCEEEEEcccccccCCCCcccccch
Q 021928 158 TALRGVRSIICPSEG----F--------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKG 207 (305)
Q Consensus 158 ~~~~~~d~Vi~~~~g----~--------------------------~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~ 207 (305)
+.+..+|++|++++- . .....++.+-.+||++||.....+..+...|..+
T Consensus 87 ~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVnisS~ag~~~~~~~~~Y~as 166 (604)
T 2et6_A 87 KNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAGLYGNFGQANYASA 166 (604)
T ss_dssp HHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTBHHHHHH
T ss_pred HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCCCCCchHHHHH
Confidence 344578999988441 0 1112334455799999998776655555555544
Q ss_pred HH--HHHHHHHHHHHHhCCCCEEEEecCCcccCCCCCcceeeecCCCCCCccCHHHHHHHHHHHhhCCC-CCCcEEEEec
Q 021928 208 NA--RKLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIP-QTGLIFEVVN 284 (305)
Q Consensus 208 ~~--~~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~~~~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~-~~~~~~~v~~ 284 (305)
+. ..+.+.....+...++.+..|.||..++...... .........++|+|.+++.++.... ..|+.+.+.+
T Consensus 167 Kaal~~lt~~la~El~~~gIrVn~v~Pg~~T~m~~~~~------~~~~~~~~~pe~vA~~v~~L~s~~~~itG~~~~vdg 240 (604)
T 2et6_A 167 KSALLGFAETLAKEGAKYNIKANAIAPLARSRMTESIM------PPPMLEKLGPEKVAPLVLYLSSAENELTGQFFEVAA 240 (604)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEECCCCHHHHTTS------CHHHHTTCSHHHHHHHHHHHTSSSCCCCSCEEEEET
T ss_pred HHHHHHHHHHHHHHhCccCeEEEEEccCCcCccccccC------ChhhhccCCHHHHHHHHHHHhCCcccCCCCEEEECC
Confidence 32 2222333344567899999999974221100000 0011234689999999999997653 3578888876
Q ss_pred C
Q 021928 285 G 285 (305)
Q Consensus 285 g 285 (305)
|
T Consensus 241 G 241 (604)
T 2et6_A 241 G 241 (604)
T ss_dssp T
T ss_pred C
Confidence 5
|
| >3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV} | Back alignment and structure |
|---|
Probab=99.13 E-value=9.8e-10 Score=103.87 Aligned_cols=177 Identities=13% Similarity=0.015 Sum_probs=109.1
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHh-CCCeEEEEEcCcchhh------------------hhcCCCcEEeecCCCCHHHHH
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIV-KRTRIKALVKDKRNAM------------------ESFGTYVESMAGDASNKKFLK 157 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~-~g~~V~~~~R~~~~~~------------------~~~~~~v~~v~~D~~d~~~~~ 157 (305)
.+|++|||||+++||+++++.|++ .|++|+++.|+.+... +..+..+..+.+|++|.++++
T Consensus 60 ~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dvtd~~~v~ 139 (422)
T 3s8m_A 60 GPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDAFSDAARA 139 (422)
T ss_dssp SCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHHH
T ss_pred CCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecCCCHHHHH
Confidence 359999999999999999999999 9999999998754321 123456788999999987765
Q ss_pred HHh--------cCccEEEECCcc---------------------------------------------------------
Q 021928 158 TAL--------RGVRSIICPSEG--------------------------------------------------------- 172 (305)
Q Consensus 158 ~~~--------~~~d~Vi~~~~g--------------------------------------------------------- 172 (305)
+++ ..+|++|++++.
T Consensus 140 ~~v~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~v~Vn~~ 219 (422)
T 3s8m_A 140 QVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIEPASAQEIEDTITVMGG 219 (422)
T ss_dssp HHHHHHHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHSS
T ss_pred HHHHHHHHHcCCCCCEEEEcCccccccccccccccccccccccccccccccccccccccccccCCCCHHHHHHHHHhhch
Confidence 544 457999986321
Q ss_pred ----hHhhhhhhcC----CCEEEEEcccccccCCCCc--ccccchHH--HHHHHHHHHHHHhCCCCEEEEecCCcccCCC
Q 021928 173 ----FISNAGSLKG----VQHVILLSQLSVYRGSGGI--QALMKGNA--RKLAEQDESMLMASGIPYTIIRTGVLQNTPG 240 (305)
Q Consensus 173 ----~~~~~a~~~g----v~~~V~iSS~~~~~~~~~~--~~~~~~~~--~~~~~~aE~~l~~~gi~~tilRPg~l~~~~~ 240 (305)
.+...+.... -.++|.+||.+...+.+.. ..|..++. ..+.+.....+...|+++..|.||.+.....
T Consensus 220 ~~~~~~~~a~~~~~m~~~gG~IVniSSi~g~~~~p~~~~~aY~ASKaAl~~lTrsLA~Ela~~GIRVNaVaPG~i~T~~~ 299 (422)
T 3s8m_A 220 QDWELWIDALEGAGVLADGARSVAFSYIGTEITWPIYWHGALGKAKVDLDRTAQRLNARLAKHGGGANVAVLKSVVTQAS 299 (422)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEEEEEEECCCGGGHHHHTSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTG
T ss_pred hHHHHHHHHHHHHHHhhCCCEEEEEeCchhhccCCCccchHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEcCCCcChhh
Confidence 0001111111 2489999998776543322 33433321 2222333344567899999999999654322
Q ss_pred CCcceeeecC----CCCCCccCHHHHHHHHHHHhhCC
Q 021928 241 GKQGFQFEEG----CAANGSLSKEDAAFICVEALESI 273 (305)
Q Consensus 241 ~~~~~~~~~~----~~~~~~Is~~DvA~~iv~~l~~~ 273 (305)
..-+...... ......-..+|+|+.+.+++.+.
T Consensus 300 ~~ip~~~~~~~~~~~~m~r~G~pEdva~~v~~L~sd~ 336 (422)
T 3s8m_A 300 AAIPVMPLYISMVYKIMKEKGLHEGTIEQLDRLFRER 336 (422)
T ss_dssp GGSTHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHT
T ss_pred hcCCCChHHHHHHHhhhcCCcChHHHHHHHHHHhcch
Confidence 1100000000 00011223489999999988654
|
| >2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* | Back alignment and structure |
|---|
Probab=99.02 E-value=5.2e-10 Score=121.28 Aligned_cols=187 Identities=12% Similarity=0.063 Sum_probs=112.7
Q ss_pred CCCCEEEEEcCCCh-HHHHHHHHHHhCCCeEEEE-EcCcchhhh-------hc---CCCcEEeecCCCCHHHHHHHhc--
Q 021928 96 EARDAVLVTDGDSD-IGQMVILSLIVKRTRIKAL-VKDKRNAME-------SF---GTYVESMAGDASNKKFLKTALR-- 161 (305)
Q Consensus 96 ~~~~~vlVtGatG~-iG~~l~~~L~~~g~~V~~~-~R~~~~~~~-------~~---~~~v~~v~~D~~d~~~~~~~~~-- 161 (305)
..++++|||||+++ ||++++++|++.|++|+++ .|+.++..+ .. +.++.++.+|++|.+++.++++
T Consensus 673 l~gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~alv~~i 752 (1887)
T 2uv8_A 673 FKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEFI 752 (1887)
T ss_dssp CTTCEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHHHHHHH
Confidence 45689999999998 9999999999999999998 466544211 11 3468899999999988876652
Q ss_pred -----------CccEEEECCc----c-hH------------------------hhhhh------hcCCCEEEEEcccccc
Q 021928 162 -----------GVRSIICPSE----G-FI------------------------SNAGS------LKGVQHVILLSQLSVY 195 (305)
Q Consensus 162 -----------~~d~Vi~~~~----g-~~------------------------~~~a~------~~gv~~~V~iSS~~~~ 195 (305)
.+|++|++++ + .+ ..+++ +.+-.+||++||..+.
T Consensus 753 ~~~~~~~G~G~~LDiLVNNAGi~~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~~~G~IVnISS~ag~ 832 (1887)
T 2uv8_A 753 YDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNHGT 832 (1887)
T ss_dssp HSCTTTTSCCCCCSEEEECCCCCCCSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSCCEEEEEEECSCTTC
T ss_pred HHhccccccCCCCeEEEECCCcCCCCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhCCCCEEEEEcChHhc
Confidence 5899998833 1 10 01111 1122589999998776
Q ss_pred cCCCCcccccchHHHHHHHHH-HHHHHh---CCCCEEEEecCCcc-cCCCCC-cceeeecCCCCCCccCHHHHHHHHHHH
Q 021928 196 RGSGGIQALMKGNARKLAEQD-ESMLMA---SGIPYTIIRTGVLQ-NTPGGK-QGFQFEEGCAANGSLSKEDAAFICVEA 269 (305)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~a-E~~l~~---~gi~~tilRPg~l~-~~~~~~-~~~~~~~~~~~~~~Is~~DvA~~iv~~ 269 (305)
.+ +...|..+++. .... ...+.. ..+.++.|.||++. ...... ....-..........+++|+|.+++.+
T Consensus 833 ~g--g~~aYaASKAA--L~~Lttr~lA~ela~~IrVNaV~PG~V~tT~m~~~~~~~~~~~~~~plr~~sPEEVA~avlfL 908 (1887)
T 2uv8_A 833 FG--GDGMYSESKLS--LETLFNRWHSESWANQLTVCGAIIGWTRGTGLMSANNIIAEGIEKMGVRTFSQKEMAFNLLGL 908 (1887)
T ss_dssp SS--CBTTHHHHHHH--GGGHHHHHHHSSCTTTEEEEEEEECCEECC-----CCTTHHHHHTTSCCCEEHHHHHHHHHGG
T ss_pred cC--CCchHHHHHHH--HHHHHHHHHHHHhCCCeEEEEEEecccccccccccchhHHHHHHhcCCCCCCHHHHHHHHHHH
Confidence 54 33334332211 1111 122221 22889999999975 221110 000000001112455899999999999
Q ss_pred hhCC-C--CCCcEEEEe--cCC
Q 021928 270 LESI-P--QTGLIFEVV--NGE 286 (305)
Q Consensus 270 l~~~-~--~~~~~~~v~--~g~ 286 (305)
+... . ..++.+.+. +|.
T Consensus 909 aSd~~as~iTGq~I~VDVDGG~ 930 (1887)
T 2uv8_A 909 LTPEVVELCQKSPVMADLNGGL 930 (1887)
T ss_dssp GSHHHHHHHHHSCEEEEESCST
T ss_pred hCCCccccccCcEEEEECCCCe
Confidence 8654 1 245667664 553
|
| >3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} | Back alignment and structure |
|---|
Probab=99.02 E-value=3.6e-09 Score=108.19 Aligned_cols=174 Identities=18% Similarity=0.186 Sum_probs=119.0
Q ss_pred CCCEEEEEcCCChHHHHHHHHHH-hCCC-eEEEEEcCcch---hh------hhcCCCcEEeecCCCCHHHHHHHhcC---
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLI-VKRT-RIKALVKDKRN---AM------ESFGTYVESMAGDASNKKFLKTALRG--- 162 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~-~~g~-~V~~~~R~~~~---~~------~~~~~~v~~v~~D~~d~~~~~~~~~~--- 162 (305)
+.++++||||+|+||++++++|+ ++|+ +|++++|+... .. +..+.++.++.+|++|.+++.++++.
T Consensus 529 ~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~G~~v~~~~~Dvsd~~~v~~~~~~~~~ 608 (795)
T 3slk_A 529 AAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAYGAEVSLQACDVADRETLAKVLASIPD 608 (795)
T ss_dssp TTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCT
T ss_pred cccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Confidence 56899999999999999999999 7998 59999998432 11 12345789999999999999988764
Q ss_pred ---ccEEEECCcc----h----------------------HhhhhhhcCCCEEEEEcccccccCCCCcccccchHHHHHH
Q 021928 163 ---VRSIICPSEG----F----------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLA 213 (305)
Q Consensus 163 ---~d~Vi~~~~g----~----------------------~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~~~~ 213 (305)
+|.|||+++- . +..++ .... +||++||.....+..+...|...+ .+.
T Consensus 609 ~~~id~lVnnAGv~~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~-~~~l-~iV~~SS~ag~~g~~g~~~YaAak--a~~ 684 (795)
T 3slk_A 609 EHPLTAVVHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLELI-DPDV-ALVLFSSVSGVLGSGGQGNYAAAN--SFL 684 (795)
T ss_dssp TSCEEEEEECCCCCCCCCGGGCCHHHHHHHHCCCCCHHHHHHHHS-CTTS-EEEEEEETHHHHTCSSCHHHHHHH--HHH
T ss_pred hCCCEEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHH-hhCC-EEEEEccHHhcCCCCCCHHHHHHH--HHH
Confidence 5899988431 1 11111 1122 899999998877766666665544 234
Q ss_pred HHHHHHHHhCCCCEEEEecCCcccCCCCC---cceeeecCCCCCCccCHHHHHHHHHHHhhCCC
Q 021928 214 EQDESMLMASGIPYTIIRTGVLQNTPGGK---QGFQFEEGCAANGSLSKEDAAFICVEALESIP 274 (305)
Q Consensus 214 ~~aE~~l~~~gi~~tilRPg~l~~~~~~~---~~~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~ 274 (305)
+..-.+++..|++++.|.||.+.+..-.. ....-.........++.+++.+.+..++..+.
T Consensus 685 ~alA~~~~~~Gi~v~sI~pG~v~t~g~~~~~~~~~~~~~~~~g~~~l~~~e~~~~~~~~l~~~~ 748 (795)
T 3slk_A 685 DALAQQRQSRGLPTRSLAWGPWAEHGMASTLREAEQDRLARSGLLPISTEEGLSQFDAACGGAH 748 (795)
T ss_dssp HHHHHHHHHTTCCEEEEEECCCSCCCHHHHHHHHHHHHHHHTTBCCCCHHHHHHHHHHHHTSSC
T ss_pred HHHHHHHHHcCCeEEEEECCeECcchhhccccHHHHHHHHhcCCCCCCHHHHHHHHHHHHhCCC
Confidence 44445677899999999999865321000 00000001123456888999999998887654
|
| >3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A* | Back alignment and structure |
|---|
Probab=99.02 E-value=6.2e-09 Score=97.70 Aligned_cols=176 Identities=11% Similarity=0.021 Sum_probs=108.8
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHh-CCCeEEEEEcCcchhh------------------hhcCCCcEEeecCCCCHHHHH
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIV-KRTRIKALVKDKRNAM------------------ESFGTYVESMAGDASNKKFLK 157 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~-~g~~V~~~~R~~~~~~------------------~~~~~~v~~v~~D~~d~~~~~ 157 (305)
.+|++|||||+++||+++++.|++ .|++|+++.|+.+... +..+..+..+.+|++|.+++.
T Consensus 46 ~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~a~~i~~Dvtd~~~v~ 125 (405)
T 3zu3_A 46 GPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAKSINGDAFSDEIKQ 125 (405)
T ss_dssp CCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHHH
T ss_pred CCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCceEEEECCCCCHHHHH
Confidence 359999999999999999999999 9999999988654311 122446788999999988776
Q ss_pred HHhc-------CccEEEECCcc----------------------------------------h-----------------
Q 021928 158 TALR-------GVRSIICPSEG----------------------------------------F----------------- 173 (305)
Q Consensus 158 ~~~~-------~~d~Vi~~~~g----------------------------------------~----------------- 173 (305)
++++ .+|++|++++. .
T Consensus 126 ~~v~~i~~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i~~~t~ee~~~~v~Vn~~~ 205 (405)
T 3zu3_A 126 LTIDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVLQPATQSEIDSTVAVMGGE 205 (405)
T ss_dssp HHHHHHHHHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHSSH
T ss_pred HHHHHHHHHcCCCCEEEEcCccccccCccccccccccccccccccccccccccccccccccCCCCCHHHHHHHHHhhchh
Confidence 6553 57999987321 0
Q ss_pred ----HhhhhhhcC----CCEEEEEcccccccCCCCc--ccccchHH--HHHHHHHHHHHHhC-CCCEEEEecCCcccCCC
Q 021928 174 ----ISNAGSLKG----VQHVILLSQLSVYRGSGGI--QALMKGNA--RKLAEQDESMLMAS-GIPYTIIRTGVLQNTPG 240 (305)
Q Consensus 174 ----~~~~a~~~g----v~~~V~iSS~~~~~~~~~~--~~~~~~~~--~~~~~~aE~~l~~~-gi~~tilRPg~l~~~~~ 240 (305)
+...+.... -.++|.+||.+...+.+.. ..|...+. ..+.+.....+... |+++..+.||.+.....
T Consensus 206 ~~~~~~~~~~~~~m~~~gG~IVniSSi~~~~~~p~~~~~aY~AaKaal~~ltrsLA~Ela~~~GIRVNaVaPG~i~T~~s 285 (405)
T 3zu3_A 206 DWQMWIDALLDAGVLAEGAQTTAFTYLGEKITHDIYWNGSIGAAKKDLDQKVLAIRESLAAHGGGDARVSVLKAVVSQAS 285 (405)
T ss_dssp HHHHHHHHHHHHTCEEEEEEEEEEECCCCGGGTTTTTTSHHHHHHHHHHHHHHHHHHHHHTTTSCEEEEEECCCCCCHHH
T ss_pred HHHHHHHHHHHHhhhhCCcEEEEEeCchhhCcCCCccchHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEEeCCCcCchh
Confidence 001111111 1489999998876554433 44443332 22223333445668 99999999999643211
Q ss_pred -CCcce-eee--cCCCCCCccCHHHHHHHHHHHhhC
Q 021928 241 -GKQGF-QFE--EGCAANGSLSKEDAAFICVEALES 272 (305)
Q Consensus 241 -~~~~~-~~~--~~~~~~~~Is~~DvA~~iv~~l~~ 272 (305)
..... .+. .......+-..+|+|+.+.+++.+
T Consensus 286 ~~ip~~p~y~~~l~~~mkr~G~~Ed~a~~i~~L~sd 321 (405)
T 3zu3_A 286 SAIPMMPLYLSLLFKVMKEKGTHEGCIEQVYSLYKD 321 (405)
T ss_dssp HTSTTHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHH
T ss_pred hcCCCCcHHHHHHHHHHhcCCCcHHHHHHHHHHHhc
Confidence 00000 000 000001122348999999998864
|
| >4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A* | Back alignment and structure |
|---|
Probab=99.02 E-value=4.9e-09 Score=99.42 Aligned_cols=187 Identities=9% Similarity=-0.023 Sum_probs=112.6
Q ss_pred CCCEEEEEcCCChHHHH--HHHHHHhCCCeEEEEEcCcchh------------------hhhcCCCcEEeecCCCCHHHH
Q 021928 97 ARDAVLVTDGDSDIGQM--VILSLIVKRTRIKALVKDKRNA------------------MESFGTYVESMAGDASNKKFL 156 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~--l~~~L~~~g~~V~~~~R~~~~~------------------~~~~~~~v~~v~~D~~d~~~~ 156 (305)
.+|++|||||+++||++ +++.|++.|++|+++.|+.... .+..+..+..+.+|++|.+++
T Consensus 59 ~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvtd~~~v 138 (418)
T 4eue_A 59 GPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDAFSNETK 138 (418)
T ss_dssp CCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTCHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeCCCHHHH
Confidence 35999999999999999 9999999999999999864321 112345688999999998887
Q ss_pred HHHhc-------CccEEEECCcch--------------------------------------------------------
Q 021928 157 KTALR-------GVRSIICPSEGF-------------------------------------------------------- 173 (305)
Q Consensus 157 ~~~~~-------~~d~Vi~~~~g~-------------------------------------------------------- 173 (305)
+++++ .+|++|++++..
T Consensus 139 ~~~v~~i~~~~G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~~~vn~~ 218 (418)
T 4eue_A 139 DKVIKYIKDEFGKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEITLKKVSSASIEEIEETRKVMGG 218 (418)
T ss_dssp HHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEEEEEECBCCHHHHHHHHHHHSS
T ss_pred HHHHHHHHHHcCCCCEEEECCcccccccccccccccccccccccccccccccccccccccccccCCCHHHHHHHHHHhhH
Confidence 76553 579999863210
Q ss_pred -----Hhhhhhhc----CCCEEEEEcccccccCCCCc--ccccchHH--HHHHHHHHHHHHh-CCCCEEEEecCCcccCC
Q 021928 174 -----ISNAGSLK----GVQHVILLSQLSVYRGSGGI--QALMKGNA--RKLAEQDESMLMA-SGIPYTIIRTGVLQNTP 239 (305)
Q Consensus 174 -----~~~~a~~~----gv~~~V~iSS~~~~~~~~~~--~~~~~~~~--~~~~~~aE~~l~~-~gi~~tilRPg~l~~~~ 239 (305)
+...+... +-.++|.+||.+...+.+.. ..|..+++ ..+.+.....+.. .|+++..+.||.+....
T Consensus 219 ~~~~~~~~~l~~~~~~~~gg~IV~iSSi~~~~~~p~~~~~aY~ASKaAL~~ltrsLA~ELa~~~GIrVN~V~PG~v~T~~ 298 (418)
T 4eue_A 219 EDWQEWCEELLYEDCFSDKATTIAYSYIGSPRTYKIYREGTIGIAKKDLEDKAKLINEKLNRVIGGRAFVSVNKALVTKA 298 (418)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEEEEEECCCCGGGTTTTTTSHHHHHHHHHHHHHHHHHHHHHHHHSCEEEEEECCCCCCHH
T ss_pred HHHHHHHHHHHHHhhhcCCcEEEEEeCchhcCCCCccccHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEECCcCcChh
Confidence 00111111 12479999998776554433 44443332 2223333445667 89999999999964321
Q ss_pred C-CCcce---eeecCCCCCCccCHHHHHHHHHHHhhCCCCCCcEEEEe
Q 021928 240 G-GKQGF---QFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVV 283 (305)
Q Consensus 240 ~-~~~~~---~~~~~~~~~~~Is~~DvA~~iv~~l~~~~~~~~~~~v~ 283 (305)
. ..... ...........-..+|+++.+..++.+.-..+....+.
T Consensus 299 s~~ip~~p~y~~~~~~~mk~~G~~E~v~e~~~~L~sd~~~~g~~~~~D 346 (418)
T 4eue_A 299 SAYIPTFPLYAAILYKVMKEKNIHENCIMQIERMFSEKIYSNEKIQFD 346 (418)
T ss_dssp HHTSTTHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHTTSSSSCCCCC
T ss_pred hhcCCCCcHHHHHHHHHHhhcCChHHHHHHHHHHhhccccCCCccccC
Confidence 1 00000 00000000111245889999998886543333333333
|
| >2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A* | Back alignment and structure |
|---|
Probab=98.97 E-value=1.4e-09 Score=117.71 Aligned_cols=185 Identities=10% Similarity=0.016 Sum_probs=112.2
Q ss_pred CCCCEEEEEcCCCh-HHHHHHHHHHhCCCeEEEEE-cCcchhh-------hhc---CCCcEEeecCCCCHHHHHHHhc--
Q 021928 96 EARDAVLVTDGDSD-IGQMVILSLIVKRTRIKALV-KDKRNAM-------ESF---GTYVESMAGDASNKKFLKTALR-- 161 (305)
Q Consensus 96 ~~~~~vlVtGatG~-iG~~l~~~L~~~g~~V~~~~-R~~~~~~-------~~~---~~~v~~v~~D~~d~~~~~~~~~-- 161 (305)
..++++|||||+|+ ||++++++|++.|++|+++. |+.+... +.+ +..+.++.+|++|.+++.++++
T Consensus 650 L~gKvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~alv~~i 729 (1878)
T 2uv9_A 650 FQGKHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEALVNYI 729 (1878)
T ss_dssp CTTCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHH
Confidence 34689999999999 99999999999999999985 5544321 112 3468899999999988877653
Q ss_pred ---------CccEEEECCc----c-hH------------------------hhhh------hhcCCCEEEEEcccccccC
Q 021928 162 ---------GVRSIICPSE----G-FI------------------------SNAG------SLKGVQHVILLSQLSVYRG 197 (305)
Q Consensus 162 ---------~~d~Vi~~~~----g-~~------------------------~~~a------~~~gv~~~V~iSS~~~~~~ 197 (305)
.+|+|||+++ + .+ ..++ .+.+-.+||++||..+..+
T Consensus 730 ~~~~~~~G~~IDiLVnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~~~G~IVnISS~ag~~g 809 (1878)
T 2uv9_A 730 YDTKNGLGWDLDYVVPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETRPAQVILPLSPNHGTFG 809 (1878)
T ss_dssp HCSSSSCCCCCSEEEECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSCCEEECCEECSCSSSSS
T ss_pred HHhhcccCCCCcEEEeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhCCCCEEEEEcchhhccC
Confidence 4899998833 1 00 0010 1112358999999877654
Q ss_pred CCCcccccchHHHHHHHHHHHHHHh---CCCCEEEEecCCcc-cCCCCCcceee-ecCCCCCCccCHHHHHHHHHHHhhC
Q 021928 198 SGGIQALMKGNARKLAEQDESMLMA---SGIPYTIIRTGVLQ-NTPGGKQGFQF-EEGCAANGSLSKEDAAFICVEALES 272 (305)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~aE~~l~~---~gi~~tilRPg~l~-~~~~~~~~~~~-~~~~~~~~~Is~~DvA~~iv~~l~~ 272 (305)
....|..+++.-.. .+..++.+ ..+.++.|.||++. ........... ..........+++|+|.+++.++..
T Consensus 810 --g~~aYaASKAAL~a-Lt~~laAeEla~~IrVNaVaPG~V~gT~m~~~~~~~~~~~~~~plr~~sPeEVA~avlfLaSd 886 (1878)
T 2uv9_A 810 --NDGLYSESKLALET-LFNRWYSESWGNYLTICGAVIGWTRGTGLMSANNLVAEGVEKLGVRTFSQQEMAFNLLGLMAP 886 (1878)
T ss_dssp --CCSSHHHHHHHHTT-HHHHHHHSTTTTTEEEEEEEECCBCCTTSCSHHHHTHHHHHTTTCCCBCHHHHHHHHHHHHSH
T ss_pred --CchHHHHHHHHHHH-HHHHHHHHHcCCCeEEEEEEecceecCcccccchhhHHHHHhcCCCCCCHHHHHHHHHHHhCC
Confidence 23334332221100 11122221 23889999999965 22211100000 0001112455899999999998864
Q ss_pred CC---CCCcEEEEe
Q 021928 273 IP---QTGLIFEVV 283 (305)
Q Consensus 273 ~~---~~~~~~~v~ 283 (305)
.. ..++.+.+.
T Consensus 887 ~a~s~iTGq~I~VD 900 (1878)
T 2uv9_A 887 AIVNLCQSDPVFAD 900 (1878)
T ss_dssp HHHHHHTTSCEEEE
T ss_pred cccccccCcEEEEE
Confidence 43 246777763
|
| >1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A* | Back alignment and structure |
|---|
Probab=98.93 E-value=8.5e-10 Score=101.39 Aligned_cols=138 Identities=12% Similarity=0.048 Sum_probs=84.3
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCC-------eEEEEEcCcc--hh----hhhcCCCcEEeecCCCCHHHHHHHhcCcc
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRT-------RIKALVKDKR--NA----MESFGTYVESMAGDASNKKFLKTALRGVR 164 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~-------~V~~~~R~~~--~~----~~~~~~~v~~v~~D~~d~~~~~~~~~~~d 164 (305)
+|+|+||||+||||++++..|+++|+ +|+++++.+. +. .+.....+.++ +|+.+.+.+.++++++|
T Consensus 4 ~mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~~~~~~-~di~~~~~~~~a~~~~D 82 (327)
T 1y7t_A 4 PVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLL-AGLEATDDPKVAFKDAD 82 (327)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTE-EEEEEESCHHHHTTTCS
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhhccccccc-CCeEeccChHHHhCCCC
Confidence 47999999999999999999999996 8999887641 11 11111112333 67766566788899999
Q ss_pred EEEECCc-----c---------------hHhhhhhhcC-CC-EEEEEccccc---c---cC---CCCcccccchHHHHHH
Q 021928 165 SIICPSE-----G---------------FISNAGSLKG-VQ-HVILLSQLSV---Y---RG---SGGIQALMKGNARKLA 213 (305)
Q Consensus 165 ~Vi~~~~-----g---------------~~~~~a~~~g-v~-~~V~iSS~~~---~---~~---~~~~~~~~~~~~~~~~ 213 (305)
+|||+++ + .+.+++++.+ .+ +|+++|+... + .. .++...|..++.. ..
T Consensus 83 ~Vih~Ag~~~~~~~~~~~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~snp~~~~~~~~~~~~~~~~p~~~yg~tkl~-~e 161 (327)
T 1y7t_A 83 YALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPANTNALIAYKNAPGLNPRNFTAMTRLD-HN 161 (327)
T ss_dssp EEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHHHHHTCTTSCGGGEEECCHHH-HH
T ss_pred EEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCchhhhHHHHHHHcCCCChhheeccchHH-HH
Confidence 9999833 1 0344566665 55 7777776431 1 11 1122234332221 11
Q ss_pred HHHHHHHHhCCCCEEEEecCCccc
Q 021928 214 EQDESMLMASGIPYTIIRTGVLQN 237 (305)
Q Consensus 214 ~~aE~~l~~~gi~~tilRPg~l~~ 237 (305)
+....+-+..+++++++||..+.+
T Consensus 162 r~~~~~a~~~g~~~~~vr~~~V~G 185 (327)
T 1y7t_A 162 RAKAQLAKKTGTGVDRIRRMTVWG 185 (327)
T ss_dssp HHHHHHHHHHTCCGGGEECCEEEB
T ss_pred HHHHHHHHHhCcChhheeeeEEEc
Confidence 111222345699999999987444
|
| >2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.92 E-value=2.3e-10 Score=120.91 Aligned_cols=181 Identities=13% Similarity=0.067 Sum_probs=109.7
Q ss_pred CCCCEEEEEcCCCh-HHHHHHHHHHhCCCeEEEE-EcCcchhh---hhc-------CCCcEEeecCCCCHHHHHHHhc--
Q 021928 96 EARDAVLVTDGDSD-IGQMVILSLIVKRTRIKAL-VKDKRNAM---ESF-------GTYVESMAGDASNKKFLKTALR-- 161 (305)
Q Consensus 96 ~~~~~vlVtGatG~-iG~~l~~~L~~~g~~V~~~-~R~~~~~~---~~~-------~~~v~~v~~D~~d~~~~~~~~~-- 161 (305)
..++++|||||+++ ||++++++|+++|++|+++ .|+.++.. +.+ +..+.++.+|++|.+++.++++
T Consensus 474 L~GKvALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~vV~~DVTD~esVeaLVe~I 553 (1688)
T 2pff_A 474 FKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEFI 553 (1688)
T ss_dssp CCSCCEEECSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTTTHHHHTTTTTCCTTCEEEEEECCSSSTTHHHHHHHHH
T ss_pred cCCCEEEEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCCHHHHHHHHHHH
Confidence 45689999999998 9999999999999999998 46554321 111 3467889999999888776652
Q ss_pred -----------CccEEEECCc----c-h------------------------Hhhhh------hhcCCCEEEEEcccccc
Q 021928 162 -----------GVRSIICPSE----G-F------------------------ISNAG------SLKGVQHVILLSQLSVY 195 (305)
Q Consensus 162 -----------~~d~Vi~~~~----g-~------------------------~~~~a------~~~gv~~~V~iSS~~~~ 195 (305)
.+|++|++++ + . +..++ ++.+-.+||++||..+.
T Consensus 554 ~e~~~~~GfG~~IDILVNNAGI~~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~krggGrIVnISSiAG~ 633 (1688)
T 2pff_A 554 YDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNHGT 633 (1688)
T ss_dssp HSCTTSSSCCCCCCEEECCCCCCCCSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTSCEEECCCCCSCTTT
T ss_pred HHhccccccCCCCeEEEECCCcCCCCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhCCCCEEEEEEChHhc
Confidence 4899998732 1 0 00111 11122589999998766
Q ss_pred cCCCCcccccchHHHHHHHHHHHH----HHh---CCCCEEEEecCCcc-cCCCCCcceee-ecCCCCCCccCHHHHHHHH
Q 021928 196 RGSGGIQALMKGNARKLAEQDESM----LMA---SGIPYTIIRTGVLQ-NTPGGKQGFQF-EEGCAANGSLSKEDAAFIC 266 (305)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~aE~~----l~~---~gi~~tilRPg~l~-~~~~~~~~~~~-~~~~~~~~~Is~~DvA~~i 266 (305)
.+ +...|..+++ . .+.+ +.+ ..+.++.|.||++. ........... ..........+++|+|.++
T Consensus 634 ~G--g~saYaASKA---A--L~aLttrsLAeEla~~IRVNaVaPG~V~TT~M~~~~e~~~~~l~~iplR~~sPEEVA~aI 706 (1688)
T 2pff_A 634 FG--GDGMYSESKL---S--LETLFNRWHSESWANQLTVCGAIIGWTRGTGLMSANNIIAEGIEKMGVRTFSQKEMAFNL 706 (1688)
T ss_dssp SS--CBTTHHHHHH---H--HTHHHHHTTTSSCTTTEECCCCCCCCCCCCSSSCTTTTCSTTTSSSSCCCCCCCTTHHHH
T ss_pred cC--CchHHHHHHH---H--HHHHHHHHHHHHcCCCeEEEEEEECcCcCCcccCCchHHHHHHHhCCCCCCCHHHHHHHH
Confidence 54 2333433221 1 2222 111 22777888999875 22111100000 0001111345889999999
Q ss_pred HHHhhCCC---CCCcEEEEe
Q 021928 267 VEALESIP---QTGLIFEVV 283 (305)
Q Consensus 267 v~~l~~~~---~~~~~~~v~ 283 (305)
+.++.... ..++.+.+.
T Consensus 707 lFLaSd~sAs~ITGq~I~VD 726 (1688)
T 2pff_A 707 LGLLTPEVVELCQKSPVMAD 726 (1688)
T ss_dssp HHHTSTTHHHHHTTSCCCCC
T ss_pred HHHhCCCccccccCcEEEEE
Confidence 99997551 246666653
|
| >2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A* | Back alignment and structure |
|---|
Probab=98.85 E-value=1.7e-08 Score=80.39 Aligned_cols=95 Identities=9% Similarity=0.062 Sum_probs=73.4
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHH-hcCccEEEECCcc---
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA-LRGVRSIICPSEG--- 172 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~-~~~~d~Vi~~~~g--- 172 (305)
++++|+|+|+ |.+|+.+++.|.+.|++|+++.|++++..........++.+|..+.+.+.++ +.++|+||++.+.
T Consensus 5 ~~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~~~ 83 (144)
T 2hmt_A 5 KNKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYASYATHAVIANATEENELLSLGIRNFEYVIVAIGANIQ 83 (144)
T ss_dssp -CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHTTTTTCSEEEECCTTCHHHHHTTTGGGCSEEEECCCSCHH
T ss_pred cCCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhCCEEEEeCCCCHHHHHhcCCCCCCEEEECCCCchH
Confidence 3578999998 9999999999999999999999987665433333467788999998888776 7889999988542
Q ss_pred ---hHhhhhhhcCCCEEEEEccc
Q 021928 173 ---FISNAGSLKGVQHVILLSQL 192 (305)
Q Consensus 173 ---~~~~~a~~~gv~~~V~iSS~ 192 (305)
.+...+++.+++++|..++.
T Consensus 84 ~~~~~~~~~~~~~~~~ii~~~~~ 106 (144)
T 2hmt_A 84 ASTLTTLLLKELDIPNIWVKAQN 106 (144)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCS
T ss_pred HHHHHHHHHHHcCCCeEEEEeCC
Confidence 13345667788877766544
|
| >3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=98.82 E-value=2.2e-08 Score=80.14 Aligned_cols=92 Identities=16% Similarity=0.165 Sum_probs=72.4
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHH-hcCccEEEECCcch---
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA-LRGVRSIICPSEGF--- 173 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~-~~~~d~Vi~~~~g~--- 173 (305)
+++|+|+|+ |.+|+++++.|.+.|++|+++.+++++........+.++.+|.++.+.+.++ ++++|+||.+.+..
T Consensus 6 ~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~~~~~~~~gd~~~~~~l~~~~~~~~d~vi~~~~~~~~n 84 (141)
T 3llv_A 6 RYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDKSKEKIELLEDEGFDAVIADPTDESFYRSLDLEGVSAVLITGSDDEFN 84 (141)
T ss_dssp CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEEEECCTTCHHHHHHSCCTTCSEEEECCSCHHHH
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHCCCcEEECCCCCHHHHHhCCcccCCEEEEecCCHHHH
Confidence 578999998 9999999999999999999999998775544444688999999999988876 56899999885532
Q ss_pred --HhhhhhhcCCCEEEEEc
Q 021928 174 --ISNAGSLKGVQHVILLS 190 (305)
Q Consensus 174 --~~~~a~~~gv~~~V~iS 190 (305)
....+++.+..++|...
T Consensus 85 ~~~~~~a~~~~~~~iia~~ 103 (141)
T 3llv_A 85 LKILKALRSVSDVYAIVRV 103 (141)
T ss_dssp HHHHHHHHHHCCCCEEEEE
T ss_pred HHHHHHHHHhCCceEEEEE
Confidence 33445666666665443
|
| >1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* | Back alignment and structure |
|---|
Probab=98.72 E-value=2.3e-08 Score=90.05 Aligned_cols=76 Identities=12% Similarity=0.125 Sum_probs=63.7
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh---cC--CCcEEeecCCCCHHHHHHHhcCccEEEECC
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FG--TYVESMAGDASNKKFLKTALRGVRSIICPS 170 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~~--~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~ 170 (305)
..+++++||||+|++|++++++|++.|++|+++.|+.++..+. +. .++.++.+|++|.+++.++++.+|+||+++
T Consensus 117 l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~DvlVn~a 196 (287)
T 1lu9_A 117 VKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVKGAHFVFTAG 196 (287)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTTTCSEEEECC
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHhCCEEEECC
Confidence 3568999999999999999999999999999999987654322 11 146788899999999999999999999985
Q ss_pred c
Q 021928 171 E 171 (305)
Q Consensus 171 ~ 171 (305)
+
T Consensus 197 g 197 (287)
T 1lu9_A 197 A 197 (287)
T ss_dssp C
T ss_pred C
Confidence 4
|
| >1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9 | Back alignment and structure |
|---|
Probab=98.70 E-value=8.9e-08 Score=75.80 Aligned_cols=92 Identities=17% Similarity=0.110 Sum_probs=70.1
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcC-CCcEEeecCCCCHHHHHHH-hcCccEEEECCcch--
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG-TYVESMAGDASNKKFLKTA-LRGVRSIICPSEGF-- 173 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~-~~v~~v~~D~~d~~~~~~~-~~~~d~Vi~~~~g~-- 173 (305)
.|+|+|+|+ |.+|+.+++.|.+.|++|+++.|+++....... .++.++.+|..+.+.+.++ ++++|+||++.+..
T Consensus 4 ~m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~~~ 82 (140)
T 1lss_A 4 GMYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAVTGKEEV 82 (140)
T ss_dssp -CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEECCSCHHH
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhcCcEEEEcCCCCHHHHHHcCcccCCEEEEeeCCchH
Confidence 379999997 999999999999999999999998766443221 2467888999998887755 78899999885432
Q ss_pred ---HhhhhhhcCCCEEEEEc
Q 021928 174 ---ISNAGSLKGVQHVILLS 190 (305)
Q Consensus 174 ---~~~~a~~~gv~~~V~iS 190 (305)
+...++..+.+++|..+
T Consensus 83 ~~~~~~~~~~~~~~~ii~~~ 102 (140)
T 1lss_A 83 NLMSSLLAKSYGINKTIARI 102 (140)
T ss_dssp HHHHHHHHHHTTCCCEEEEC
T ss_pred HHHHHHHHHHcCCCEEEEEe
Confidence 34456667777777543
|
| >1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9 | Back alignment and structure |
|---|
Probab=98.68 E-value=1.6e-07 Score=76.24 Aligned_cols=91 Identities=18% Similarity=0.252 Sum_probs=70.2
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCc-ch---hhhhcCCCcEEeecCCCCHHHHHHH-hcCccEEEECCcc
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK-RN---AMESFGTYVESMAGDASNKKFLKTA-LRGVRSIICPSEG 172 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~-~~---~~~~~~~~v~~v~~D~~d~~~~~~~-~~~~d~Vi~~~~g 172 (305)
.++|+|+|+ |.+|+.++++|.+.|++|+++.+++ ++ ..+..+.++.++.+|.+|.+.+.++ ++++|+||.+.+.
T Consensus 3 ~~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~ 81 (153)
T 1id1_A 3 KDHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILALSDN 81 (153)
T ss_dssp CSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEEECSSC
T ss_pred CCcEEEECC-CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhcCCCeEEEcCCCCHHHHHHcChhhCCEEEEecCC
Confidence 478999997 9999999999999999999999985 32 2233455689999999999999887 8999999988543
Q ss_pred h-----Hhhhhhhc-CCCEEEEE
Q 021928 173 F-----ISNAGSLK-GVQHVILL 189 (305)
Q Consensus 173 ~-----~~~~a~~~-gv~~~V~i 189 (305)
. ....+++. +..++|..
T Consensus 82 d~~n~~~~~~a~~~~~~~~ii~~ 104 (153)
T 1id1_A 82 DADNAFVVLSAKDMSSDVKTVLA 104 (153)
T ss_dssp HHHHHHHHHHHHHHTSSSCEEEE
T ss_pred hHHHHHHHHHHHHHCCCCEEEEE
Confidence 2 33344544 66666653
|
| >2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A* | Back alignment and structure |
|---|
Probab=98.67 E-value=3.1e-07 Score=74.80 Aligned_cols=94 Identities=13% Similarity=0.075 Sum_probs=72.5
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhc-CCCcEEeecCCCCHHHHHHH-hcCccEEEECCcch-
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF-GTYVESMAGDASNKKFLKTA-LRGVRSIICPSEGF- 173 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-~~~v~~v~~D~~d~~~~~~~-~~~~d~Vi~~~~g~- 173 (305)
..++|+|+|+ |.+|+.+++.|.+.|++|+++.|++++..... ..++.++.+|..+.+.+.++ +.++|+||.+.+..
T Consensus 18 ~~~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~g~~~~~~d~~~~~~l~~~~~~~ad~Vi~~~~~~~ 96 (155)
T 2g1u_A 18 KSKYIVIFGC-GRLGSLIANLASSSGHSVVVVDKNEYAFHRLNSEFSGFTVVGDAAEFETLKECGMEKADMVFAFTNDDS 96 (155)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCTTCCSEEEESCTTSHHHHHTTTGGGCSEEEECSSCHH
T ss_pred CCCcEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHhcCCCcEEEecCCCHHHHHHcCcccCCEEEEEeCCcH
Confidence 4589999997 99999999999999999999999987765443 34567888999998877776 78899999885432
Q ss_pred ----Hhhhhhh-cCCCEEEEEcc
Q 021928 174 ----ISNAGSL-KGVQHVILLSQ 191 (305)
Q Consensus 174 ----~~~~a~~-~gv~~~V~iSS 191 (305)
....++. .+..++|...+
T Consensus 97 ~~~~~~~~~~~~~~~~~iv~~~~ 119 (155)
T 2g1u_A 97 TNFFISMNARYMFNVENVIARVY 119 (155)
T ss_dssp HHHHHHHHHHHTSCCSEEEEECS
T ss_pred HHHHHHHHHHHHCCCCeEEEEEC
Confidence 3344554 66667766543
|
| >3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=98.63 E-value=1.6e-07 Score=87.48 Aligned_cols=94 Identities=18% Similarity=0.182 Sum_probs=72.3
Q ss_pred cCcCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEECCcc
Q 021928 93 EFPEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG 172 (305)
Q Consensus 93 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~g 172 (305)
.+.+..|+|+|.|| |++|+.+++.|.+ .++|.+.+|+.++.... ...+..+..|+.|.+++.++++++|+||++.+.
T Consensus 11 ~~~g~~mkilvlGa-G~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~-~~~~~~~~~d~~d~~~l~~~~~~~DvVi~~~p~ 87 (365)
T 3abi_A 11 HIEGRHMKVLILGA-GNIGRAIAWDLKD-EFDVYIGDVNNENLEKV-KEFATPLKVDASNFDKLVEVMKEFELVIGALPG 87 (365)
T ss_dssp -----CCEEEEECC-SHHHHHHHHHHTT-TSEEEEEESCHHHHHHH-TTTSEEEECCTTCHHHHHHHHTTCSEEEECCCG
T ss_pred cccCCccEEEEECC-CHHHHHHHHHHhc-CCCeEEEEcCHHHHHHH-hccCCcEEEecCCHHHHHHHHhCCCEEEEecCC
Confidence 44667789999998 9999999998864 58999999987765443 445788899999999999999999999998664
Q ss_pred h----HhhhhhhcCCCEEEEEc
Q 021928 173 F----ISNAGSLKGVQHVILLS 190 (305)
Q Consensus 173 ~----~~~~a~~~gv~~~V~iS 190 (305)
+ +.++|.++|+ |+|=+|
T Consensus 88 ~~~~~v~~~~~~~g~-~yvD~s 108 (365)
T 3abi_A 88 FLGFKSIKAAIKSKV-DMVDVS 108 (365)
T ss_dssp GGHHHHHHHHHHHTC-EEEECC
T ss_pred cccchHHHHHHhcCc-ceEeee
Confidence 3 5667777776 555544
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* | Back alignment and structure |
|---|
Probab=98.53 E-value=4.5e-07 Score=102.47 Aligned_cols=138 Identities=14% Similarity=0.148 Sum_probs=94.9
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCe-EEEEEcCcchhh-------h--hcCCCcEEeecCCCCHHHHHHHhc-----
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTR-IKALVKDKRNAM-------E--SFGTYVESMAGDASNKKFLKTALR----- 161 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~-V~~~~R~~~~~~-------~--~~~~~v~~v~~D~~d~~~~~~~~~----- 161 (305)
+.++++||||+|+||++++++|+++|++ |++++|+..+.. + ..+.++.++.+|++|.++++++++
T Consensus 1883 ~~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~ 1962 (2512)
T 2vz8_A 1883 PHKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQGVQVLVSTSNASSLDGARSLITEATQL 1962 (2512)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHHTTCEEEEECCCSSSHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHhCCCEEEEEecCCCCHHHHHHHHHHHHhc
Confidence 5689999999999999999999999997 777888854321 1 124468889999999888876653
Q ss_pred -CccEEEECCcch--------------------------Hhhhhhh--cCCCEEEEEcccccccCCCCcccccchHHHHH
Q 021928 162 -GVRSIICPSEGF--------------------------ISNAGSL--KGVQHVILLSQLSVYRGSGGIQALMKGNARKL 212 (305)
Q Consensus 162 -~~d~Vi~~~~g~--------------------------~~~~a~~--~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~~~ 212 (305)
.+|.||++++-. +..++.. ....+||++||..+..+..+...|...+. .
T Consensus 1963 g~id~lVnnAgv~~~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~~g~iV~iSS~ag~~g~~g~~~Y~aaKa--a 2040 (2512)
T 2vz8_A 1963 GPVGGVFNLAMVLRDAVLENQTPEFFQDVSKPKYSGTANLDRVTREACPELDYFVIFSSVSCGRGNAGQANYGFANS--A 2040 (2512)
T ss_dssp SCEEEEEECCCC----------------CTTTTHHHHHHHHHHHHHHCTTCCEEEEECCHHHHTTCTTCHHHHHHHH--H
T ss_pred CCCcEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCEEEEecchhhcCCCCCcHHHHHHHH--H
Confidence 579999884410 1111211 12369999999987766555555544222 2
Q ss_pred HHHHHHHHHhCCCCEEEEecCCcc
Q 021928 213 AEQDESMLMASGIPYTIIRTGVLQ 236 (305)
Q Consensus 213 ~~~aE~~l~~~gi~~tilRPg~l~ 236 (305)
....-++++..|++...+..|...
T Consensus 2041 l~~l~~~rr~~Gl~~~a~~~g~~~ 2064 (2512)
T 2vz8_A 2041 MERICEKRRHDGLPGLAVQWGAIG 2064 (2512)
T ss_dssp HHHHHHHHHHTTSCCCEEEECCBC
T ss_pred HHHHHHHHHHCCCcEEEEEccCcC
Confidence 223335567789998888876643
|
| >3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=98.53 E-value=3e-07 Score=76.80 Aligned_cols=91 Identities=12% Similarity=0.089 Sum_probs=70.1
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhC-CCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHH--hcCccEEEECCcch
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVK-RTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA--LRGVRSIICPSEGF 173 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~--~~~~d~Vi~~~~g~ 173 (305)
.+++|+|+|+ |.+|+.+++.|.+. |++|+++.|++++.......++.++.+|.++.+.+.++ ++++|.||.+.+..
T Consensus 38 ~~~~v~IiG~-G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~~g~~~~~gd~~~~~~l~~~~~~~~ad~vi~~~~~~ 116 (183)
T 3c85_A 38 GHAQVLILGM-GRIGTGAYDELRARYGKISLGIEIREEAAQQHRSEGRNVISGDATDPDFWERILDTGHVKLVLLAMPHH 116 (183)
T ss_dssp TTCSEEEECC-SHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHHTTCCEEECCTTCHHHHHTBCSCCCCCEEEECCSSH
T ss_pred CCCcEEEECC-CHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHHCCCCEEEcCCCCHHHHHhccCCCCCCEEEEeCCCh
Confidence 3578999995 99999999999999 99999999998775443334578889999998888887 88999999875432
Q ss_pred -----HhhhhhhcC-CCEEEE
Q 021928 174 -----ISNAGSLKG-VQHVIL 188 (305)
Q Consensus 174 -----~~~~a~~~g-v~~~V~ 188 (305)
....++..+ ..++|.
T Consensus 117 ~~~~~~~~~~~~~~~~~~ii~ 137 (183)
T 3c85_A 117 QGNQTALEQLQRRNYKGQIAA 137 (183)
T ss_dssp HHHHHHHHHHHHTTCCSEEEE
T ss_pred HHHHHHHHHHHHHCCCCEEEE
Confidence 233455555 445554
|
| >3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12} | Back alignment and structure |
|---|
Probab=98.52 E-value=8.3e-07 Score=71.06 Aligned_cols=75 Identities=15% Similarity=0.210 Sum_probs=63.8
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHH-hcCccEEEECCc
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA-LRGVRSIICPSE 171 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~-~~~~d~Vi~~~~ 171 (305)
...++|+|.|+ |.+|+.+++.|.+.|++|+++.++++........++.++.+|.++.+.+.++ ++++|+||.+.+
T Consensus 5 ~~~~~viIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~~g~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~ 80 (140)
T 3fwz_A 5 DICNHALLVGY-GRVGSLLGEKLLASDIPLVVIETSRTRVDELRERGVRAVLGNAANEEIMQLAHLECAKWLILTIP 80 (140)
T ss_dssp CCCSCEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEEEESCTTSHHHHHHTTGGGCSEEEECCS
T ss_pred cCCCCEEEECc-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHcCCCEEECCCCCHHHHHhcCcccCCEEEEECC
Confidence 34689999997 9999999999999999999999999876544445688999999999888775 678999998854
|
| >4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes} | Back alignment and structure |
|---|
Probab=98.44 E-value=4.5e-07 Score=85.66 Aligned_cols=88 Identities=16% Similarity=0.170 Sum_probs=70.3
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCC---CeEEEEEcCcchhhhh---cC----CCcEEeecCCCCHHHHHHHhcC--ccE
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKR---TRIKALVKDKRNAMES---FG----TYVESMAGDASNKKFLKTALRG--VRS 165 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~R~~~~~~~~---~~----~~v~~v~~D~~d~~~~~~~~~~--~d~ 165 (305)
|++|+|+|| |+||+.+++.|++.| .+|++.+|+.++..+. ++ .++..+.+|+.|.+++.+++++ +|+
T Consensus 1 M~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~~~Dv 79 (405)
T 4ina_A 1 MAKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEVKPQI 79 (405)
T ss_dssp -CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhhCCCE
Confidence 479999999 999999999999998 3899999998774332 11 2588999999999999999987 899
Q ss_pred EEECCcch----HhhhhhhcCCCEE
Q 021928 166 IICPSEGF----ISNAGSLKGVQHV 186 (305)
Q Consensus 166 Vi~~~~g~----~~~~a~~~gv~~~ 186 (305)
||++++.. +.+++.+.|+..+
T Consensus 80 Vin~ag~~~~~~v~~a~l~~g~~vv 104 (405)
T 4ina_A 80 VLNIALPYQDLTIMEACLRTGVPYL 104 (405)
T ss_dssp EEECSCGGGHHHHHHHHHHHTCCEE
T ss_pred EEECCCcccChHHHHHHHHhCCCEE
Confidence 99985532 5566777887543
|
| >3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=98.42 E-value=9.7e-07 Score=75.90 Aligned_cols=90 Identities=19% Similarity=0.224 Sum_probs=71.3
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcC-CCcEEeecCCCCHHHHHHH-hcCccEEEECCcch---
Q 021928 99 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG-TYVESMAGDASNKKFLKTA-LRGVRSIICPSEGF--- 173 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~-~~v~~v~~D~~d~~~~~~~-~~~~d~Vi~~~~g~--- 173 (305)
|+|+|+|+ |.+|+++++.|.+.|++|+++.++++....... .++.++.+|.++.+.+.++ ++++|+||.+.+..
T Consensus 1 M~iiIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d~~n 79 (218)
T 3l4b_C 1 MKVIIIGG-ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKLKATIIHGDGSHKEILRDAEVSKNDVVVILTPRDEVN 79 (218)
T ss_dssp CCEEEECC-HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHSSSEEEESCTTSHHHHHHHTCCTTCEEEECCSCHHHH
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHcCCeEEEcCCCCHHHHHhcCcccCCEEEEecCCcHHH
Confidence 67999997 999999999999999999999999877544221 2578999999999998886 78999999885532
Q ss_pred --Hhhhhhh-cCCCEEEEE
Q 021928 174 --ISNAGSL-KGVQHVILL 189 (305)
Q Consensus 174 --~~~~a~~-~gv~~~V~i 189 (305)
+...+++ .+..++|..
T Consensus 80 ~~~~~~a~~~~~~~~iia~ 98 (218)
T 3l4b_C 80 LFIAQLVMKDFGVKRVVSL 98 (218)
T ss_dssp HHHHHHHHHTSCCCEEEEC
T ss_pred HHHHHHHHHHcCCCeEEEE
Confidence 3334444 677777654
|
| >3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A* | Back alignment and structure |
|---|
Probab=98.39 E-value=2.8e-06 Score=96.68 Aligned_cols=76 Identities=8% Similarity=0.057 Sum_probs=59.7
Q ss_pred CCCCEEEEEcCCCh-HHHHHHHHHHhCCCeEEEEEcCcch-----hhh---hc---CCCcEEeecCCCCHHHHHHHh---
Q 021928 96 EARDAVLVTDGDSD-IGQMVILSLIVKRTRIKALVKDKRN-----AME---SF---GTYVESMAGDASNKKFLKTAL--- 160 (305)
Q Consensus 96 ~~~~~vlVtGatG~-iG~~l~~~L~~~g~~V~~~~R~~~~-----~~~---~~---~~~v~~v~~D~~d~~~~~~~~--- 160 (305)
..+|+++||||+++ ||+++++.|++.|++|++..|+.+. ..+ .+ +..+..+.+|++|.+++++++
T Consensus 2134 l~gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~G~~~~~v~~Dvtd~~~v~~lv~~i 2213 (3089)
T 3zen_D 2134 XXDEVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHARFDATLWVVPANMASYSDIDKLVEWV 2213 (3089)
T ss_dssp CCCCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHHH
Confidence 35699999999999 9999999999999999999998655 211 11 235778999999988877653
Q ss_pred -c-------CccEEEECCc
Q 021928 161 -R-------GVRSIICPSE 171 (305)
Q Consensus 161 -~-------~~d~Vi~~~~ 171 (305)
+ ++|++|++++
T Consensus 2214 ~~~~~~~fG~IDILVNNAG 2232 (3089)
T 3zen_D 2214 GTEQTESLGPQSIHLKDAQ 2232 (3089)
T ss_dssp TSCCEEEESSSEEEECCCC
T ss_pred HhhhhhhcCCCCEEEECCC
Confidence 2 4688887643
|
| >1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A | Back alignment and structure |
|---|
Probab=98.39 E-value=9.5e-07 Score=84.59 Aligned_cols=73 Identities=10% Similarity=0.063 Sum_probs=62.2
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcC--CCcEEeecCCCCHHHHHHHhcCccEEEECCc
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG--TYVESMAGDASNKKFLKTALRGVRSIICPSE 171 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~--~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~ 171 (305)
+++|+|+| +|++|+++++.|++.|++|++++|++++..+... ..+..+.+|+.|.+++.++++++|+||++++
T Consensus 3 ~k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~~~~~~~~~~Dv~d~~~l~~~l~~~DvVIn~a~ 77 (450)
T 1ff9_A 3 TKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVAKHDLVISLIP 77 (450)
T ss_dssp CCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTTCTTEEEEECCTTCHHHHHHHHTTSSEEEECCC
T ss_pred CCEEEEEC-CCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHhcCCceEEEeecCCHHHHHHHHcCCcEEEECCc
Confidence 47999998 7999999999999999999999999876544322 2467889999999999999999999999854
|
| >1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A | Back alignment and structure |
|---|
Probab=98.32 E-value=1.6e-06 Score=79.53 Aligned_cols=95 Identities=15% Similarity=0.130 Sum_probs=64.6
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCC--CeEEEEEcCcch--hhhhcCCCcE-EeecCCCCHHHHHHHhcCccEEEECCc
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRN--AMESFGTYVE-SMAGDASNKKFLKTALRGVRSIICPSE 171 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g--~~V~~~~R~~~~--~~~~~~~~v~-~v~~D~~d~~~~~~~~~~~d~Vi~~~~ 171 (305)
++|+|+||||+|++|+.++..|+.+| ++|++++++++. ..+....... .+.+ +.+.+++.++++++|+||++++
T Consensus 7 ~~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~~~~~~dL~~~~~~~~v~~-~~~t~d~~~al~gaDvVi~~ag 85 (326)
T 1smk_A 7 PGFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNAPGVTADISHMDTGAVVRG-FLGQQQLEAALTGMDLIIVPAG 85 (326)
T ss_dssp -CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSHHHHHHHHHTSCSSCEEEE-EESHHHHHHHHTTCSEEEECCC
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCcHhHHHHhhcccccceEEE-EeCCCCHHHHcCCCCEEEEcCC
Confidence 45899999999999999999999999 789998877652 1111111111 1111 2345678889999999998832
Q ss_pred -----c---------------hHhhhhhhcCCCEEEEEccc
Q 021928 172 -----G---------------FISNAGSLKGVQHVILLSQL 192 (305)
Q Consensus 172 -----g---------------~~~~~a~~~gv~~~V~iSS~ 192 (305)
+ .+.+.+.+.+.+.+|+++|.
T Consensus 86 ~~~~~g~~r~dl~~~N~~~~~~i~~~i~~~~p~~~viv~SN 126 (326)
T 1smk_A 86 VPRKPGMTRDDLFKINAGIVKTLCEGIAKCCPRAIVNLISN 126 (326)
T ss_dssp CCCCSSCCCSHHHHHHHHHHHHHHHHHHHHCTTSEEEECCS
T ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECC
Confidence 1 03344566777778888764
|
| >2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A | Back alignment and structure |
|---|
Probab=98.30 E-value=1.7e-06 Score=75.14 Aligned_cols=90 Identities=14% Similarity=0.042 Sum_probs=70.7
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHH-hcCccEEEECCcch--
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA-LRGVRSIICPSEGF-- 173 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~-~~~~d~Vi~~~~g~-- 173 (305)
..++|+|+|+ |.+|+.++++|.+.|+ |+++.++++...... .++.++.+|.+|.+.+.++ ++++|.||.+.+..
T Consensus 8 ~~~~viI~G~-G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~-~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d~~ 84 (234)
T 2aef_A 8 KSRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKKVLR-SGANFVHGDPTRVSDLEKANVRGARAVIVDLESDSE 84 (234)
T ss_dssp --CEEEEESC-CHHHHHHHHHSTTSEE-EEEESCGGGHHHHHH-TTCEEEESCTTCHHHHHHTTCTTCSEEEECCSCHHH
T ss_pred CCCEEEEECC-ChHHHHHHHHHHhCCe-EEEEECCHHHHHHHh-cCCeEEEcCCCCHHHHHhcCcchhcEEEEcCCCcHH
Confidence 3579999998 9999999999999999 999999887754444 5689999999999999887 89999999885432
Q ss_pred ---HhhhhhhcCCC-EEEEE
Q 021928 174 ---ISNAGSLKGVQ-HVILL 189 (305)
Q Consensus 174 ---~~~~a~~~gv~-~~V~i 189 (305)
....+++.+.+ ++|.-
T Consensus 85 n~~~~~~a~~~~~~~~iia~ 104 (234)
T 2aef_A 85 TIHCILGIRKIDESVRIIAE 104 (234)
T ss_dssp HHHHHHHHHHHCSSSEEEEE
T ss_pred HHHHHHHHHHHCCCCeEEEE
Confidence 33456666665 55543
|
| >2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.27 E-value=1.3e-06 Score=84.06 Aligned_cols=74 Identities=16% Similarity=0.133 Sum_probs=61.9
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhC-CCeEEEEEcCcchhhhhcC-CCcEEeecCCCCHHHHHHHhcCccEEEECCc
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVK-RTRIKALVKDKRNAMESFG-TYVESMAGDASNKKFLKTALRGVRSIICPSE 171 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~R~~~~~~~~~~-~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~ 171 (305)
++++|+|+|| |++|+.+++.|++. |++|++++|+++++.+... .++.++.+|+.|.+++.++++++|+||++++
T Consensus 22 ~~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~~~~~~~~~D~~d~~~l~~~l~~~DvVIn~tp 97 (467)
T 2axq_A 22 MGKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLANAQALAKPSGSKAISLDVTDDSALDKVLADNDVVISLIP 97 (467)
T ss_dssp -CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGGGTCEEEECCTTCHHHHHHHHHTSSEEEECSC
T ss_pred CCCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhcCCcEEEEecCCHHHHHHHHcCCCEEEECCc
Confidence 4589999998 99999999999998 7899999999876543321 2467788999999999999999999999855
|
| >1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A | Back alignment and structure |
|---|
Probab=98.20 E-value=7.5e-07 Score=81.82 Aligned_cols=94 Identities=12% Similarity=0.054 Sum_probs=63.1
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCC-------eEEEEEcC----cchhh----hhcCCCcEEeecCCCCHHHHHHHhc
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRT-------RIKALVKD----KRNAM----ESFGTYVESMAGDASNKKFLKTALR 161 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~-------~V~~~~R~----~~~~~----~~~~~~v~~v~~D~~d~~~~~~~~~ 161 (305)
++++|+||||+|+||++++..|+..|+ +|++++++ +++.. +.......+ ..|+...+++.++++
T Consensus 4 ~~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~~~-~~~i~~~~~~~~al~ 82 (329)
T 1b8p_A 4 TPMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFPL-LAGMTAHADPMTAFK 82 (329)
T ss_dssp CCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTCTT-EEEEEEESSHHHHTT
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhcccc-cCcEEEecCcHHHhC
Confidence 358999999999999999999999885 78888887 33221 111111111 245554456788999
Q ss_pred CccEEEECCc-----c---------------hHhhhhhhcC-CC-EEEEEcc
Q 021928 162 GVRSIICPSE-----G---------------FISNAGSLKG-VQ-HVILLSQ 191 (305)
Q Consensus 162 ~~d~Vi~~~~-----g---------------~~~~~a~~~g-v~-~~V~iSS 191 (305)
++|+||++++ + .+.+.+.+.+ .+ +||++|.
T Consensus 83 ~aD~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~SN 134 (329)
T 1b8p_A 83 DADVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVGN 134 (329)
T ss_dssp TCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred CCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccC
Confidence 9999998833 1 0334455563 55 8888875
|
| >2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
Probab=98.19 E-value=4.2e-06 Score=72.90 Aligned_cols=71 Identities=11% Similarity=0.187 Sum_probs=52.6
Q ss_pred CCEEEEEcC----------------CChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCH----HHHH
Q 021928 98 RDAVLVTDG----------------DSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNK----KFLK 157 (305)
Q Consensus 98 ~~~vlVtGa----------------tG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~----~~~~ 157 (305)
+|+|||||| +|++|.++++.|+.+|++|+++.|..... ...+.++.++ |+... +.+.
T Consensus 3 gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~~-~~~~~~~~~~--~v~s~~em~~~v~ 79 (232)
T 2gk4_A 3 AMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRALK-PEPHPNLSIR--EITNTKDLLIEMQ 79 (232)
T ss_dssp CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSCC-CCCCTTEEEE--ECCSHHHHHHHHH
T ss_pred CCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCcccc-ccCCCCeEEE--EHhHHHHHHHHHH
Confidence 589999999 99999999999999999999999975321 1112345544 45554 3445
Q ss_pred HHhcCccEEEECCc
Q 021928 158 TALRGVRSIICPSE 171 (305)
Q Consensus 158 ~~~~~~d~Vi~~~~ 171 (305)
+.+.++|++|++++
T Consensus 80 ~~~~~~Dili~aAA 93 (232)
T 2gk4_A 80 ERVQDYQVLIHSMA 93 (232)
T ss_dssp HHGGGCSEEEECSB
T ss_pred HhcCCCCEEEEcCc
Confidence 56678999998843
|
| >1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1 | Back alignment and structure |
|---|
Probab=98.13 E-value=3.9e-06 Score=70.71 Aligned_cols=94 Identities=15% Similarity=0.105 Sum_probs=62.4
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCH---HHHHHHhc--CccEEEECCc
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNK---KFLKTALR--GVRSIICPSE 171 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~---~~~~~~~~--~~d~Vi~~~~ 171 (305)
++++|+|+||+|+||..+++.+...|++|++++|++++.......+... ..|..+. +.+.+... ++|+||++.+
T Consensus 38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~g~~~-~~d~~~~~~~~~~~~~~~~~~~D~vi~~~g 116 (198)
T 1pqw_A 38 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSRLGVEY-VGDSRSVDFADEILELTDGYGVDVVLNSLA 116 (198)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHTTCCSE-EEETTCSTHHHHHHHHTTTCCEEEEEECCC
T ss_pred CCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCE-EeeCCcHHHHHHHHHHhCCCCCeEEEECCc
Confidence 4589999999999999999999999999999999876543221112222 2466553 33344432 5899998855
Q ss_pred chH-h---hhhhhcCCCEEEEEcccc
Q 021928 172 GFI-S---NAGSLKGVQHVILLSQLS 193 (305)
Q Consensus 172 g~~-~---~~a~~~gv~~~V~iSS~~ 193 (305)
+.. . +.++.. .++|.+++..
T Consensus 117 ~~~~~~~~~~l~~~--G~~v~~g~~~ 140 (198)
T 1pqw_A 117 GEAIQRGVQILAPG--GRFIELGKKD 140 (198)
T ss_dssp THHHHHHHHTEEEE--EEEEECSCGG
T ss_pred hHHHHHHHHHhccC--CEEEEEcCCC
Confidence 432 2 223333 3888887654
|
| >4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A | Back alignment and structure |
|---|
Probab=98.08 E-value=1.2e-05 Score=75.03 Aligned_cols=73 Identities=16% Similarity=0.176 Sum_probs=58.8
Q ss_pred CCCEEEEEcCCChHHHHHHHHHH-hCCCeEEEEEcCcchh------------------hhhcCCCcEEeecCCCCHHHHH
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLI-VKRTRIKALVKDKRNA------------------MESFGTYVESMAGDASNKKFLK 157 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~-~~g~~V~~~~R~~~~~------------------~~~~~~~v~~v~~D~~d~~~~~ 157 (305)
.+|++|||||+.++|.+.+..|+ ..|..|+++.+..+.. .+..+.....+.+|++|.++++
T Consensus 49 ~pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d~e~i~ 128 (401)
T 4ggo_A 49 APKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFSDEIKA 128 (401)
T ss_dssp CCCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTSHHHHH
T ss_pred CCCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCCHHHHH
Confidence 46999999999999999999998 6799999998865321 1223557889999999988777
Q ss_pred HHhc-------CccEEEEC
Q 021928 158 TALR-------GVRSIICP 169 (305)
Q Consensus 158 ~~~~-------~~d~Vi~~ 169 (305)
++++ ++|.+||+
T Consensus 129 ~vi~~i~~~~G~IDiLVhS 147 (401)
T 4ggo_A 129 QVIEEAKKKGIKFDLIVYS 147 (401)
T ss_dssp HHHHHHHHTTCCEEEEEEC
T ss_pred HHHHHHHHhcCCCCEEEEe
Confidence 6664 57999998
|
| >1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A* | Back alignment and structure |
|---|
Probab=98.00 E-value=1.4e-05 Score=72.77 Aligned_cols=89 Identities=9% Similarity=0.009 Sum_probs=58.8
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCC--eEEEEEc--Ccchhh-------hh---cCCCcEEeecCCCCHHHHHHHhcCcc
Q 021928 99 DAVLVTDGDSDIGQMVILSLIVKRT--RIKALVK--DKRNAM-------ES---FGTYVESMAGDASNKKFLKTALRGVR 164 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~R--~~~~~~-------~~---~~~~v~~v~~D~~d~~~~~~~~~~~d 164 (305)
|+|+||||+|++|++++..|+.+|. ++.++++ ++++.. .. .+..+++...+ +++.++++++|
T Consensus 1 mKI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~----d~l~~al~gaD 76 (313)
T 1hye_A 1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVES----DENLRIIDESD 76 (313)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEE----TTCGGGGTTCS
T ss_pred CEEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhHHhcCCCeEEEeCC----cchHHHhCCCC
Confidence 5899999999999999999998885 5777776 443211 00 00122222211 23567899999
Q ss_pred EEEECCc-----c---------------hHhhhhhhcCCCEEEEEccc
Q 021928 165 SIICPSE-----G---------------FISNAGSLKGVQHVILLSQL 192 (305)
Q Consensus 165 ~Vi~~~~-----g---------------~~~~~a~~~gv~~~V~iSS~ 192 (305)
+||++++ + .+.+++++.+ +.+|+++|-
T Consensus 77 ~Vi~~Ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~-~~~vlv~SN 123 (313)
T 1hye_A 77 VVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEIC-DTKIFVITN 123 (313)
T ss_dssp EEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC-CCEEEECSS
T ss_pred EEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhC-CeEEEEecC
Confidence 9999833 1 1344566777 888888774
|
| >1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A* | Back alignment and structure |
|---|
Probab=97.99 E-value=2.7e-05 Score=67.49 Aligned_cols=169 Identities=7% Similarity=0.054 Sum_probs=92.4
Q ss_pred CCCEEEEEcC----------------CChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHH--
Q 021928 97 ARDAVLVTDG----------------DSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKT-- 158 (305)
Q Consensus 97 ~~~~vlVtGa----------------tG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~-- 158 (305)
.+++|||||| +|++|.++++.|+++|++|+++.|+.. .. .+.+++ ..|+.+.+.+.+
T Consensus 7 ~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~-l~--~~~g~~--~~dv~~~~~~~~~v 81 (226)
T 1u7z_A 7 KHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVS-LP--TPPFVK--RVDVMTALEMEAAV 81 (226)
T ss_dssp TTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCC-CC--CCTTEE--EEECCSHHHHHHHH
T ss_pred CCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCcc-cc--cCCCCe--EEccCcHHHHHHHH
Confidence 4699999999 799999999999999999999988652 11 122333 468887655443
Q ss_pred --HhcCccEEEECCcc--hHhhhhhhcCCCE-------EE--EEc------ccccccCCC-CcccccchHHHHHHHHHHH
Q 021928 159 --ALRGVRSIICPSEG--FISNAGSLKGVQH-------VI--LLS------QLSVYRGSG-GIQALMKGNARKLAEQDES 218 (305)
Q Consensus 159 --~~~~~d~Vi~~~~g--~~~~~a~~~gv~~-------~V--~iS------S~~~~~~~~-~~~~~~~~~~~~~~~~aE~ 218 (305)
.+.++|++|++++- +........++++ +. +.- .++....+. ....|... .....+.+..
T Consensus 82 ~~~~~~~Dili~~Aav~d~~p~~~~~~KIkk~~~~~~~l~l~L~~~pdIL~~l~~~~~~~~~~VGFaaE-t~~l~e~A~~ 160 (226)
T 1u7z_A 82 NASVQQQNIFIGCAAVADYRAATVAPEKIKKQATQGDELTIKMVKNPDIVAGVAALKDHRPYVVGFAAE-TNNVEEYARQ 160 (226)
T ss_dssp HHHGGGCSEEEECCBCCSEEESSCCSSCC-------CEEEEEEEECCCHHHHHHHCSSSCCEEEEEEEE-SSSHHHHHHH
T ss_pred HHhcCCCCEEEECCcccCCCCccCChHHhccccccCCceEEEEeecHHHHHHHHhhhcCCcEEEEcchh-hchHHHHHHH
Confidence 45678999988441 1100111122222 11 110 110000011 11112110 0112344556
Q ss_pred HHHhCCCCEEEEecCCcc-cCCCCCc--ceeeec-CCCCCCccCHHHHHHHHHHHhh
Q 021928 219 MLMASGIPYTIIRTGVLQ-NTPGGKQ--GFQFEE-GCAANGSLSKEDAAFICVEALE 271 (305)
Q Consensus 219 ~l~~~gi~~tilRPg~l~-~~~~~~~--~~~~~~-~~~~~~~Is~~DvA~~iv~~l~ 271 (305)
-|...++++++..+-.-. ...+... ...+.. +.......+.+++|+.++..+.
T Consensus 161 kL~~k~~d~ivaN~~~~~~~~f~~~~n~v~li~~~~~~~~~~~sK~~vA~~I~~~i~ 217 (226)
T 1u7z_A 161 KRIRKNLDLICANDVSQPTQGFNSDNNALHLFWQDGDKVLPLERKELLGQLLLDEIV 217 (226)
T ss_dssp HHHHHTCSEEEEEECSSTTSSTTSSEEEEEEEETTEEEEEEEEEHHHHHHHHHHHHH
T ss_pred HHHhcCCCEEEEeeccccCCccCCCceEEEEEeCCCcEecCCCCHHHHHHHHHHHHH
Confidence 788899999999875421 1222222 222322 1122345678999998887764
|
| >3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A* | Back alignment and structure |
|---|
Probab=97.95 E-value=2.5e-05 Score=73.85 Aligned_cols=73 Identities=16% Similarity=0.156 Sum_probs=63.4
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHH-hcCccEEEECCc
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA-LRGVRSIICPSE 171 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~-~~~~d~Vi~~~~ 171 (305)
.++|+|.|. |.+|+.+++.|.+.|++|+++.++++........++.++.+|.++.+.+.++ ++++|+||.+.+
T Consensus 4 ~~~viIiG~-Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~~g~~vi~GDat~~~~L~~agi~~A~~viv~~~ 77 (413)
T 3l9w_A 4 GMRVIIAGF-GRFGQITGRLLLSSGVKMVVLDHDPDHIETLRKFGMKVFYGDATRMDLLESAGAAKAEVLINAID 77 (413)
T ss_dssp CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHHTTCCCEESCTTCHHHHHHTTTTTCSEEEECCS
T ss_pred CCeEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHhCCCeEEEcCCCCHHHHHhcCCCccCEEEECCC
Confidence 478999997 9999999999999999999999999875544344688999999999999887 789999998854
|
| >1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A | Back alignment and structure |
|---|
Probab=97.85 E-value=6.1e-05 Score=68.22 Aligned_cols=87 Identities=8% Similarity=0.114 Sum_probs=58.6
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCC--eEEEEEc--Ccchhhh-------h--cCCCcEEeecCCCCHHHHHHHhcCccE
Q 021928 99 DAVLVTDGDSDIGQMVILSLIVKRT--RIKALVK--DKRNAME-------S--FGTYVESMAGDASNKKFLKTALRGVRS 165 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~R--~~~~~~~-------~--~~~~v~~v~~D~~d~~~~~~~~~~~d~ 165 (305)
|+|+||||+|++|+.++..|+..|+ ++.++++ ++++... . +...+++.. + + .++++++|+
T Consensus 1 mKI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~-~--~----~~a~~~aDv 73 (303)
T 1o6z_A 1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQ-G--G----YEDTAGSDV 73 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEE-C--C----GGGGTTCSE
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEe-C--C----HHHhCCCCE
Confidence 5899999999999999999998885 6777777 5433211 0 112233332 1 2 456999999
Q ss_pred EEECCc-----ch---------------HhhhhhhcCCCEEEEEccc
Q 021928 166 IICPSE-----GF---------------ISNAGSLKGVQHVILLSQL 192 (305)
Q Consensus 166 Vi~~~~-----g~---------------~~~~a~~~gv~~~V~iSS~ 192 (305)
||++++ +. +.+.+++.+.+.+|+++|-
T Consensus 74 Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~p~~~viv~SN 120 (303)
T 1o6z_A 74 VVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTSN 120 (303)
T ss_dssp EEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTTCSCCEEEECCS
T ss_pred EEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEeCC
Confidence 999833 11 3345666777888888764
|
| >1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A | Back alignment and structure |
|---|
Probab=97.83 E-value=3.4e-05 Score=70.58 Aligned_cols=88 Identities=15% Similarity=0.082 Sum_probs=69.6
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHH-hcCccEEEECCcch---
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA-LRGVRSIICPSEGF--- 173 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~-~~~~d~Vi~~~~g~--- 173 (305)
.++|+|.|+ |.+|+.++++|.+.|+ |+++.++++... ....++.++.+|.+|.+.++++ ++++|+|+.+.+..
T Consensus 115 ~~~viI~G~-G~~g~~l~~~L~~~g~-v~vid~~~~~~~-~~~~~~~~i~gd~~~~~~L~~a~i~~a~~vi~~~~~d~~n 191 (336)
T 1lnq_A 115 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKK-VLRSGANFVHGDPTRVSDLEKANVRGARAVIVDLESDSET 191 (336)
T ss_dssp -CEEEEESC-CHHHHHHHTTGGGSCE-EEEESCGGGHHH-HHHTTCEEEESCTTSHHHHHHTCSTTEEEEEECCSSHHHH
T ss_pred cCCEEEECC-cHHHHHHHHHHHhCCc-EEEEeCChhhhh-HHhCCcEEEEeCCCCHHHHHhcChhhccEEEEcCCccHHH
Confidence 468999997 9999999999999999 999999987765 4345689999999999999887 88999999885432
Q ss_pred --HhhhhhhcCCC-EEEE
Q 021928 174 --ISNAGSLKGVQ-HVIL 188 (305)
Q Consensus 174 --~~~~a~~~gv~-~~V~ 188 (305)
....+++.+.+ ++|.
T Consensus 192 ~~~~~~ar~~~~~~~iia 209 (336)
T 1lnq_A 192 IHCILGIRKIDESVRIIA 209 (336)
T ss_dssp HHHHHHHHTTCTTSEEEE
T ss_pred HHHHHHHHHHCCCCeEEE
Confidence 33345666654 5543
|
| >2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.82 E-value=2.9e-05 Score=71.37 Aligned_cols=94 Identities=13% Similarity=0.049 Sum_probs=61.2
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCH----HHHHHHhc-CccEEEECC
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNK----KFLKTALR-GVRSIICPS 170 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~----~~~~~~~~-~~d~Vi~~~ 170 (305)
.++++|||+||+|.||..+++.+...|++|++++|++++.......+.. ...|+.+. +.+.++.. ++|+||.+.
T Consensus 168 ~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~~~g~~-~~~d~~~~~~~~~~~~~~~~~~~D~vi~~~ 246 (347)
T 2hcy_A 168 MAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRSIGGE-VFIDFTKEKDIVGAVLKATDGGAHGVINVS 246 (347)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHHTTCC-EEEETTTCSCHHHHHHHHHTSCEEEEEECS
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHHHcCCc-eEEecCccHhHHHHHHHHhCCCCCEEEECC
Confidence 3568999999999999999999999999999999987664221111122 22366532 22333332 689999885
Q ss_pred cc-h-Hhhh---hhhcCCCEEEEEccc
Q 021928 171 EG-F-ISNA---GSLKGVQHVILLSQL 192 (305)
Q Consensus 171 ~g-~-~~~~---a~~~gv~~~V~iSS~ 192 (305)
+. . +..+ ++.. .++|.+++.
T Consensus 247 g~~~~~~~~~~~l~~~--G~iv~~g~~ 271 (347)
T 2hcy_A 247 VSEAAIEASTRYVRAN--GTTVLVGMP 271 (347)
T ss_dssp SCHHHHHHHTTSEEEE--EEEEECCCC
T ss_pred CcHHHHHHHHHHHhcC--CEEEEEeCC
Confidence 53 2 2222 2233 378888764
|
| >4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=97.74 E-value=5.2e-05 Score=72.71 Aligned_cols=92 Identities=13% Similarity=0.125 Sum_probs=71.0
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcC-CCcEEeecCCCCHHHHHHH-hcCccEEEECCcch-
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG-TYVESMAGDASNKKFLKTA-LRGVRSIICPSEGF- 173 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~-~~v~~v~~D~~d~~~~~~~-~~~~d~Vi~~~~g~- 173 (305)
+.|+|+|.|+ |.+|++++++|.+.|++|+++.++++....... -++.++.||-++++.++++ ++.+|.++.+++..
T Consensus 2 ~~M~iiI~G~-G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~i~Gd~~~~~~L~~Agi~~ad~~ia~t~~De 80 (461)
T 4g65_A 2 NAMKIIILGA-GQVGGTLAENLVGENNDITIVDKDGDRLRELQDKYDLRVVNGHASHPDVLHEAGAQDADMLVAVTNTDE 80 (461)
T ss_dssp CCEEEEEECC-SHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHSSCEEEESCTTCHHHHHHHTTTTCSEEEECCSCHH
T ss_pred CcCEEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhcCcEEEEEcCCCHHHHHhcCCCcCCEEEEEcCChH
Confidence 3589999998 999999999999999999999999877543322 2588999999999999876 67899999775432
Q ss_pred ----Hhhhhhh-cCCCEEEEE
Q 021928 174 ----ISNAGSL-KGVQHVILL 189 (305)
Q Consensus 174 ----~~~~a~~-~gv~~~V~i 189 (305)
....|++ .+++++|.-
T Consensus 81 ~Nl~~~~~Ak~~~~~~~~iar 101 (461)
T 4g65_A 81 TNMAACQVAFTLFNTPNRIAR 101 (461)
T ss_dssp HHHHHHHHHHHHHCCSSEEEE
T ss_pred HHHHHHHHHHHhcCCccceeE
Confidence 2233444 477766644
|
| >3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A* | Back alignment and structure |
|---|
Probab=97.69 E-value=0.00012 Score=66.64 Aligned_cols=74 Identities=8% Similarity=0.084 Sum_probs=58.0
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcC---cchhhhhc---C--CCcEEeecCCCCHHHHHHHhcCccEE
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKD---KRNAMESF---G--TYVESMAGDASNKKFLKTALRGVRSI 166 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~---~~~~~~~~---~--~~v~~v~~D~~d~~~~~~~~~~~d~V 166 (305)
..+++++|+|| |++|+.++..|++.|. +|+++.|+ .+++.+.. . ..+.+...++.+.+.+.+.+.++|.|
T Consensus 152 l~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~~~l~~aDiI 230 (315)
T 3tnl_A 152 IIGKKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLRKEIAESVIF 230 (315)
T ss_dssp CTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHTCSEE
T ss_pred ccCCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccchHHHHHhhhcCCCEE
Confidence 45699999998 8999999999999998 89999999 55533221 1 12345556777878888899999999
Q ss_pred EECC
Q 021928 167 ICPS 170 (305)
Q Consensus 167 i~~~ 170 (305)
|+++
T Consensus 231 INaT 234 (315)
T 3tnl_A 231 TNAT 234 (315)
T ss_dssp EECS
T ss_pred EECc
Confidence 9884
|
| >1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A* | Back alignment and structure |
|---|
Probab=97.67 E-value=7.2e-06 Score=69.83 Aligned_cols=71 Identities=11% Similarity=0.040 Sum_probs=49.8
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCC-CcEEee-cCCCCHHHHHHHhcCccEEEECCc
Q 021928 99 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGT-YVESMA-GDASNKKFLKTALRGVRSIICPSE 171 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~-~v~~v~-~D~~d~~~~~~~~~~~d~Vi~~~~ 171 (305)
|+|+|+||+|.+|+.+++.|++.|++|+++.|++++....... .. .+. .|+. .+++.++++++|+||++.+
T Consensus 1 m~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~D~Vi~~~~ 73 (212)
T 1jay_A 1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRR-IAGDASIT-GMKNEDAAEACDIAVLTIP 73 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHH-HHSSCCEE-EEEHHHHHHHCSEEEECSC
T ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcc-ccccCCCC-hhhHHHHHhcCCEEEEeCC
Confidence 5799999999999999999999999999999987664322110 00 000 1222 1345566788999999844
|
| >2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=97.65 E-value=4.8e-05 Score=70.78 Aligned_cols=71 Identities=13% Similarity=0.163 Sum_probs=57.7
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh---hcCCCcEEeecCCCCHHHHHHHhcCccEEEECC
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALRGVRSIICPS 170 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~---~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~ 170 (305)
..+++|+|+|+ |.||+.+++.|...|++|++++|++++... .++.. +..|..+.+.+.+++.++|+||++.
T Consensus 164 l~~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~g~~---~~~~~~~~~~l~~~~~~~DvVi~~~ 237 (369)
T 2eez_A 164 VAPASVVILGG-GTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVFGGR---VITLTATEANIKKSVQHADLLIGAV 237 (369)
T ss_dssp BCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTS---EEEEECCHHHHHHHHHHCSEEEECC
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCce---EEEecCCHHHHHHHHhCCCEEEECC
Confidence 34699999999 999999999999999999999999866432 23322 4567778888999999999999874
|
| >2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A | Back alignment and structure |
|---|
Probab=97.62 E-value=6.3e-05 Score=69.57 Aligned_cols=89 Identities=12% Similarity=0.076 Sum_probs=56.2
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCC-----C-eEEEEEcC--cchhhh-hcCC--C-cEEeecCCCCHHHHHHHhcCccE
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKR-----T-RIKALVKD--KRNAME-SFGT--Y-VESMAGDASNKKFLKTALRGVRS 165 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g-----~-~V~~~~R~--~~~~~~-~~~~--~-v~~v~~D~~d~~~~~~~~~~~d~ 165 (305)
+++|+|.||||.+|+++++.|.+++ . +|+++.+. ..+... ..+. . .+....|+ +.+ .+.++|+
T Consensus 9 m~kVaIvGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s~~~agk~~~~~~~~l~~~~~~~~~~~-~~~----~~~~~Dv 83 (352)
T 2nqt_A 9 ATKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTAATSAGSTLGEHHPHLTPLAHRVVEPT-EAA----VLGGHDA 83 (352)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEESSCTTSBGGGTCTTCGGGTTCBCEEC-CHH----HHTTCSE
T ss_pred CCEEEEECCCCHHHHHHHHHHHcCCCCCCccEEEEEEECCCcCCCchhhhcccccccceeeeccC-CHH----HhcCCCE
Confidence 4799999999999999999999887 4 77777643 222111 1111 0 11111233 322 3569999
Q ss_pred EEECCcc----hHhhhhhhcCCCEEEEEcccc
Q 021928 166 IICPSEG----FISNAGSLKGVQHVILLSQLS 193 (305)
Q Consensus 166 Vi~~~~g----~~~~~a~~~gv~~~V~iSS~~ 193 (305)
||++.+. .+...+ +.|+ ++|-+|+..
T Consensus 84 Vf~alg~~~s~~~~~~~-~~G~-~vIDlSa~~ 113 (352)
T 2nqt_A 84 VFLALPHGHSAVLAQQL-SPET-LIIDCGADF 113 (352)
T ss_dssp EEECCTTSCCHHHHHHS-CTTS-EEEECSSTT
T ss_pred EEECCCCcchHHHHHHH-hCCC-EEEEECCCc
Confidence 9998543 244555 6675 677888764
|
| >1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=97.55 E-value=6.7e-05 Score=68.21 Aligned_cols=91 Identities=10% Similarity=0.040 Sum_probs=61.1
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh--hcCCCcEEeecCCCCH---HHHHHHhc--CccEEEEC
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME--SFGTYVESMAGDASNK---KFLKTALR--GVRSIICP 169 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~--~~~~~v~~v~~D~~d~---~~~~~~~~--~~d~Vi~~ 169 (305)
++++|+|+||+|.||..+++.+...|++|++++|++++... .++. .. ..|..+. +.+.+... ++|+||.+
T Consensus 140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~g~--~~-~~~~~~~~~~~~~~~~~~~~~~D~vi~~ 216 (327)
T 1qor_A 140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALKAGA--WQ-VINYREEDLVERLKEITGGKKVRVVYDS 216 (327)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTC--SE-EEETTTSCHHHHHHHHTTTCCEEEEEEC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCC--CE-EEECCCccHHHHHHHHhCCCCceEEEEC
Confidence 56899999999999999999999999999999998765332 2232 21 2355543 33444432 58999988
Q ss_pred CcchH-hh---hhhhcCCCEEEEEccc
Q 021928 170 SEGFI-SN---AGSLKGVQHVILLSQL 192 (305)
Q Consensus 170 ~~g~~-~~---~a~~~gv~~~V~iSS~ 192 (305)
+++.. .. .++.. .++|.+++.
T Consensus 217 ~g~~~~~~~~~~l~~~--G~iv~~g~~ 241 (327)
T 1qor_A 217 VGRDTWERSLDCLQRR--GLMVSFGNS 241 (327)
T ss_dssp SCGGGHHHHHHTEEEE--EEEEECCCT
T ss_pred CchHHHHHHHHHhcCC--CEEEEEecC
Confidence 65432 22 22333 378888764
|
| >1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A* | Back alignment and structure |
|---|
Probab=97.53 E-value=8.8e-05 Score=67.58 Aligned_cols=93 Identities=15% Similarity=0.122 Sum_probs=61.7
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh--hcCCCcEEeecCCCCH----HHHHHHh-cCccEEEE
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME--SFGTYVESMAGDASNK----KFLKTAL-RGVRSIIC 168 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~--~~~~~v~~v~~D~~d~----~~~~~~~-~~~d~Vi~ 168 (305)
.++++|+|+||+|.||..+++.+...|++|++++|++++... .++. . ...|..+. +.+.+.. .++|++|+
T Consensus 144 ~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~g~--~-~~~d~~~~~~~~~~~~~~~~~~~d~vi~ 220 (333)
T 1v3u_A 144 KGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQIGF--D-AAFNYKTVNSLEEALKKASPDGYDCYFD 220 (333)
T ss_dssp CSSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTC--S-EEEETTSCSCHHHHHHHHCTTCEEEEEE
T ss_pred CCCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCC--c-EEEecCCHHHHHHHHHHHhCCCCeEEEE
Confidence 356899999999999999999999999999999998765332 2222 2 22466541 2233333 36899998
Q ss_pred CCcchHh-hh---hhhcCCCEEEEEcccc
Q 021928 169 PSEGFIS-NA---GSLKGVQHVILLSQLS 193 (305)
Q Consensus 169 ~~~g~~~-~~---a~~~gv~~~V~iSS~~ 193 (305)
++++... .+ .+.. .++|.++...
T Consensus 221 ~~g~~~~~~~~~~l~~~--G~~v~~g~~~ 247 (333)
T 1v3u_A 221 NVGGEFLNTVLSQMKDF--GKIAICGAIS 247 (333)
T ss_dssp SSCHHHHHHHHTTEEEE--EEEEECCCCC
T ss_pred CCChHHHHHHHHHHhcC--CEEEEEeccc
Confidence 8664322 22 2222 3788877554
|
| >2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1 | Back alignment and structure |
|---|
Probab=97.53 E-value=0.00018 Score=66.22 Aligned_cols=88 Identities=18% Similarity=0.179 Sum_probs=54.2
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCC---eEEEEE-c-CcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEECCcc
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRT---RIKALV-K-DKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG 172 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~---~V~~~~-R-~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~g 172 (305)
+++|+|.||+|.+|+.+++.|.++++ +++++. | +..+... +.. .++...|. +. ..+.++|+||.+.+.
T Consensus 6 ~~kV~IiGAtG~iG~~llr~L~~~~~~~~elv~i~s~~~~g~~~~-~~g-~~i~~~~~-~~----~~~~~~DvV~~a~g~ 78 (340)
T 2hjs_A 6 PLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQRMG-FAE-SSLRVGDV-DS----FDFSSVGLAFFAAAA 78 (340)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTCEEE-ETT-EEEECEEG-GG----CCGGGCSEEEECSCH
T ss_pred CcEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEEecCCCCCCccc-cCC-cceEEecC-CH----HHhcCCCEEEEcCCc
Confidence 47899999999999999999997764 556654 2 2222111 111 12111222 11 125789999998664
Q ss_pred h----HhhhhhhcCCCEEEEEcccc
Q 021928 173 F----ISNAGSLKGVQHVILLSQLS 193 (305)
Q Consensus 173 ~----~~~~a~~~gv~~~V~iSS~~ 193 (305)
. ....+.+.|++ +|.+|+..
T Consensus 79 ~~s~~~a~~~~~aG~k-vId~Sa~~ 102 (340)
T 2hjs_A 79 EVSRAHAERARAAGCS-VIDLSGAL 102 (340)
T ss_dssp HHHHHHHHHHHHTTCE-EEETTCTT
T ss_pred HHHHHHHHHHHHCCCE-EEEeCCCC
Confidence 4 34445667875 66777654
|
| >4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A* | Back alignment and structure |
|---|
Probab=97.48 E-value=0.00018 Score=65.61 Aligned_cols=95 Identities=16% Similarity=0.168 Sum_probs=62.5
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh-cCCCcEEeecCCCCH---HHHHHHh-cCccEEEECC
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-FGTYVESMAGDASNK---KFLKTAL-RGVRSIICPS 170 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~-~~~~v~~v~~D~~d~---~~~~~~~-~~~d~Vi~~~ 170 (305)
.++++|||+||+|.||..+++.+...|++|++++|++++.... ..-+... ..|..+. +.+.+.. .++|+||.+.
T Consensus 148 ~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~d~vi~~~ 226 (336)
T 4b7c_A 148 KNGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEELGFDG-AIDYKNEDLAAGLKRECPKGIDVFFDNV 226 (336)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCCSE-EEETTTSCHHHHHHHHCTTCEEEEEESS
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCCE-EEECCCHHHHHHHHHhcCCCceEEEECC
Confidence 3578999999999999999999999999999999988764432 1112221 2344442 3333332 3689999886
Q ss_pred cchHhh----hhhhcCCCEEEEEcccc
Q 021928 171 EGFISN----AGSLKGVQHVILLSQLS 193 (305)
Q Consensus 171 ~g~~~~----~a~~~gv~~~V~iSS~~ 193 (305)
++.... ..+.. .++|.++...
T Consensus 227 g~~~~~~~~~~l~~~--G~iv~~G~~~ 251 (336)
T 4b7c_A 227 GGEILDTVLTRIAFK--ARIVLCGAIS 251 (336)
T ss_dssp CHHHHHHHHTTEEEE--EEEEECCCGG
T ss_pred CcchHHHHHHHHhhC--CEEEEEeecc
Confidence 643222 22223 4788887654
|
| >2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A* | Back alignment and structure |
|---|
Probab=97.46 E-value=0.00022 Score=61.01 Aligned_cols=66 Identities=11% Similarity=0.127 Sum_probs=50.0
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEECCc
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE 171 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~ 171 (305)
.+++|+|+| +|.+|+.+++.|.+.|++|+++.|++++.......++.+. ++.++++++|+||.+.+
T Consensus 27 ~~~~I~iiG-~G~~G~~la~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~~--------~~~~~~~~~DvVi~av~ 92 (215)
T 2vns_A 27 EAPKVGILG-SGDFARSLATRLVGSGFKVVVGSRNPKRTARLFPSAAQVT--------FQEEAVSSPEVIFVAVF 92 (215)
T ss_dssp --CCEEEEC-CSHHHHHHHHHHHHTTCCEEEEESSHHHHHHHSBTTSEEE--------EHHHHTTSCSEEEECSC
T ss_pred CCCEEEEEc-cCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcee--------cHHHHHhCCCEEEECCC
Confidence 357899999 6999999999999999999999999876544333334432 24567889999998843
|
| >2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=97.43 E-value=0.00015 Score=66.48 Aligned_cols=92 Identities=15% Similarity=0.193 Sum_probs=62.5
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh--hcCCCcEEeecCCCCH---HHHHHHhc--CccEEEEC
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME--SFGTYVESMAGDASNK---KFLKTALR--GVRSIICP 169 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~--~~~~~v~~v~~D~~d~---~~~~~~~~--~~d~Vi~~ 169 (305)
++++|||+||+|.+|..+++.+...|++|++++|++++... .++. .. ..|..+. +.+.+... ++|+||.+
T Consensus 166 ~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~ga--~~-~~d~~~~~~~~~~~~~~~~~~~d~vi~~ 242 (343)
T 2eih_A 166 PGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAKALGA--DE-TVNYTHPDWPKEVRRLTGGKGADKVVDH 242 (343)
T ss_dssp TTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTC--SE-EEETTSTTHHHHHHHHTTTTCEEEEEES
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCC--CE-EEcCCcccHHHHHHHHhCCCCceEEEEC
Confidence 56899999999999999999999999999999998766332 2332 22 2455542 34444443 68999988
Q ss_pred Ccch-H---hhhhhhcCCCEEEEEcccc
Q 021928 170 SEGF-I---SNAGSLKGVQHVILLSQLS 193 (305)
Q Consensus 170 ~~g~-~---~~~a~~~gv~~~V~iSS~~ 193 (305)
+++. + .+.++..| ++|.++...
T Consensus 243 ~g~~~~~~~~~~l~~~G--~~v~~g~~~ 268 (343)
T 2eih_A 243 TGALYFEGVIKATANGG--RIAIAGASS 268 (343)
T ss_dssp SCSSSHHHHHHHEEEEE--EEEESSCCC
T ss_pred CCHHHHHHHHHhhccCC--EEEEEecCC
Confidence 5532 2 22333333 788887653
|
| >1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=97.42 E-value=0.00019 Score=66.03 Aligned_cols=93 Identities=14% Similarity=0.062 Sum_probs=60.9
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCH---HHHHHHhc--CccEEEECC
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNK---KFLKTALR--GVRSIICPS 170 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~---~~~~~~~~--~~d~Vi~~~ 170 (305)
.++++|+|+||+|.||..+++.+...|++|++++|++++.......+.. ...|..+. +.+.+... ++|+||.++
T Consensus 169 ~~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~-~~~d~~~~~~~~~~~~~~~~~~~D~vi~~~ 247 (351)
T 1yb5_A 169 KAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQNGAH-EVFNHREVNYIDKIKKYVGEKGIDIIIEML 247 (351)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCS-EEEETTSTTHHHHHHHHHCTTCEEEEEESC
T ss_pred CCcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHcCCC-EEEeCCCchHHHHHHHHcCCCCcEEEEECC
Confidence 3568999999999999999999999999999999987664322111122 12355543 33444443 689999886
Q ss_pred cchHh-hh---hhhcCCCEEEEEcc
Q 021928 171 EGFIS-NA---GSLKGVQHVILLSQ 191 (305)
Q Consensus 171 ~g~~~-~~---a~~~gv~~~V~iSS 191 (305)
++... .+ .+.. .++|.++.
T Consensus 248 G~~~~~~~~~~l~~~--G~iv~~g~ 270 (351)
T 1yb5_A 248 ANVNLSKDLSLLSHG--GRVIVVGS 270 (351)
T ss_dssp HHHHHHHHHHHEEEE--EEEEECCC
T ss_pred ChHHHHHHHHhccCC--CEEEEEec
Confidence 54322 22 2222 37777763
|
| >2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A* | Back alignment and structure |
|---|
Probab=97.40 E-value=0.00013 Score=66.72 Aligned_cols=93 Identities=15% Similarity=0.173 Sum_probs=61.3
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh---hcCCCcEEeecCCCC----HHHHHHHh-cCccEEE
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASN----KKFLKTAL-RGVRSII 167 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~---~~~~~v~~v~~D~~d----~~~~~~~~-~~~d~Vi 167 (305)
.++++|||+||+|.||..+++.+...|++|++++|++++... .++. .. ..|..+ .+.+.+.. .++|+||
T Consensus 154 ~~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~g~--~~-~~d~~~~~~~~~~~~~~~~~~~d~vi 230 (345)
T 2j3h_A 154 KEGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKFGF--DD-AFNYKEESDLTAALKRCFPNGIDIYF 230 (345)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTSCC--SE-EEETTSCSCSHHHHHHHCTTCEEEEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCC--ce-EEecCCHHHHHHHHHHHhCCCCcEEE
Confidence 356899999999999999999999999999999998766432 2332 22 235543 23333333 3689999
Q ss_pred ECCcchHh-hh---hhhcCCCEEEEEcccc
Q 021928 168 CPSEGFIS-NA---GSLKGVQHVILLSQLS 193 (305)
Q Consensus 168 ~~~~g~~~-~~---a~~~gv~~~V~iSS~~ 193 (305)
.+.++... .+ .+.. .++|.++...
T Consensus 231 ~~~g~~~~~~~~~~l~~~--G~~v~~G~~~ 258 (345)
T 2j3h_A 231 ENVGGKMLDAVLVNMNMH--GRIAVCGMIS 258 (345)
T ss_dssp ESSCHHHHHHHHTTEEEE--EEEEECCCGG
T ss_pred ECCCHHHHHHHHHHHhcC--CEEEEEcccc
Confidence 88654322 22 2223 3788776543
|
| >1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP} | Back alignment and structure |
|---|
Probab=97.37 E-value=0.00013 Score=66.45 Aligned_cols=92 Identities=11% Similarity=0.125 Sum_probs=61.3
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh--hcCCCcEEeecCCCCH---HHHHHHh--cCccEEEE
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME--SFGTYVESMAGDASNK---KFLKTAL--RGVRSIIC 168 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~--~~~~~v~~v~~D~~d~---~~~~~~~--~~~d~Vi~ 168 (305)
.++++|+|+||+|.||..+++.+...|++|++++|++++... .++. . ...|..+. +.+.+.. .++|+||.
T Consensus 144 ~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~g~--~-~~~d~~~~~~~~~i~~~~~~~~~d~vi~ 220 (333)
T 1wly_A 144 KPGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARKLGC--H-HTINYSTQDFAEVVREITGGKGVDVVYD 220 (333)
T ss_dssp CTTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTC--S-EEEETTTSCHHHHHHHHHTTCCEEEEEE
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCC--C-EEEECCCHHHHHHHHHHhCCCCCeEEEE
Confidence 356899999999999999999999999999999998765322 2332 2 12355542 3444444 36899998
Q ss_pred CCcch-Hhh---hhhhcCCCEEEEEccc
Q 021928 169 PSEGF-ISN---AGSLKGVQHVILLSQL 192 (305)
Q Consensus 169 ~~~g~-~~~---~a~~~gv~~~V~iSS~ 192 (305)
++++. +.. .++.. .++|.++..
T Consensus 221 ~~g~~~~~~~~~~l~~~--G~iv~~g~~ 246 (333)
T 1wly_A 221 SIGKDTLQKSLDCLRPR--GMCAAYGHA 246 (333)
T ss_dssp CSCTTTHHHHHHTEEEE--EEEEECCCT
T ss_pred CCcHHHHHHHHHhhccC--CEEEEEecC
Confidence 85543 222 22333 378877654
|
| >5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A* | Back alignment and structure |
|---|
Probab=97.35 E-value=7.6e-05 Score=68.53 Aligned_cols=73 Identities=16% Similarity=0.074 Sum_probs=47.0
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCC--e-----EEEEEcCcc--h----hhhhcCCCcEEeecCCCCHHHHHHHhcCc
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRT--R-----IKALVKDKR--N----AMESFGTYVESMAGDASNKKFLKTALRGV 163 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~--~-----V~~~~R~~~--~----~~~~~~~~v~~v~~D~~d~~~~~~~~~~~ 163 (305)
++++|+||||+|+||++++..|+..+. + ++++++++. + ..+.......+. .++...+...++++++
T Consensus 2 ~~~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~~~~~-~~~~~~~~~~~~~~da 80 (333)
T 5mdh_A 2 EPIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLL-KDVIATDKEEIAFKDL 80 (333)
T ss_dssp CCEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTE-EEEEEESCHHHHTTTC
T ss_pred CCeEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHhhhhccc-CCEEEcCCcHHHhCCC
Confidence 358999999999999999999998875 5 888877642 2 111111000000 1221122346779999
Q ss_pred cEEEECC
Q 021928 164 RSIICPS 170 (305)
Q Consensus 164 d~Vi~~~ 170 (305)
|+||+++
T Consensus 81 DvVvitA 87 (333)
T 5mdh_A 81 DVAILVG 87 (333)
T ss_dssp SEEEECC
T ss_pred CEEEEeC
Confidence 9999884
|
| >2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C* | Back alignment and structure |
|---|
Probab=97.30 E-value=0.00055 Score=62.86 Aligned_cols=87 Identities=14% Similarity=0.125 Sum_probs=54.9
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCC---CeEEEEEc--CcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEECCcc
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKR---TRIKALVK--DKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG 172 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~R--~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~g 172 (305)
+++|.|.||+|.||+.+++.|.+++ .+++++.. +..+.....+..+.+ .|. +. ..+.++|+||.+.+.
T Consensus 3 ~~kV~I~GAtG~iG~~llr~L~~~~~p~~elv~i~s~~~~G~~~~~~~~~i~~--~~~-~~----~~~~~vDvVf~a~g~ 75 (336)
T 2r00_A 3 QFNVAIFGATGAVGETMLEVLQEREFPVDELFLLASERSEGKTYRFNGKTVRV--QNV-EE----FDWSQVHIALFSAGG 75 (336)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTTTCEEEETTEEEEE--EEG-GG----CCGGGCSEEEECSCH
T ss_pred ccEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEEECCCCCCCceeecCceeEE--ecC-Ch----HHhcCCCEEEECCCc
Confidence 5799999999999999999999873 47777763 222211111112222 222 11 135689999999765
Q ss_pred h----HhhhhhhcCCCEEEEEccc
Q 021928 173 F----ISNAGSLKGVQHVILLSQL 192 (305)
Q Consensus 173 ~----~~~~a~~~gv~~~V~iSS~ 192 (305)
. ......+.|+ ++|-.|+.
T Consensus 76 ~~s~~~a~~~~~~G~-~vId~s~~ 98 (336)
T 2r00_A 76 ELSAKWAPIAAEAGV-VVIDNTSH 98 (336)
T ss_dssp HHHHHHHHHHHHTTC-EEEECSST
T ss_pred hHHHHHHHHHHHcCC-EEEEcCCc
Confidence 4 3344556777 56667765
|
| >3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP} | Back alignment and structure |
|---|
Probab=97.29 E-value=0.00039 Score=61.99 Aligned_cols=67 Identities=6% Similarity=0.044 Sum_probs=49.4
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEECCc
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE 171 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~ 171 (305)
++|+|.|.|++|.+|..+++.|.+.|++|++..|++++.......++. ..+ ..++++++|+||.+.+
T Consensus 10 mmm~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~g~~-----~~~---~~~~~~~aDvVi~av~ 76 (286)
T 3c24_A 10 GPKTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRLQGMGIP-----LTD---GDGWIDEADVVVLALP 76 (286)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHHHHTTCC-----CCC---SSGGGGTCSEEEECSC
T ss_pred cCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHhcCCC-----cCC---HHHHhcCCCEEEEcCC
Confidence 457999999999999999999999999999999987664332211221 112 2356778899998744
|
| >1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A | Back alignment and structure |
|---|
Probab=97.28 E-value=0.00026 Score=65.54 Aligned_cols=70 Identities=17% Similarity=0.178 Sum_probs=53.1
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh---cCCCcEEeecCCCCHHHHHHHhcCccEEEECC
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALRGVRSIICPS 170 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~ 170 (305)
.+++|+|+|+ |.+|+.+++.|...|.+|+++.|++++.... ....+..+ ..+.+.+.+.+.++|+||.+.
T Consensus 166 ~~~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~DvVI~~~ 238 (361)
T 1pjc_A 166 KPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSRVELL---YSNSAEIETAVAEADLLIGAV 238 (361)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGSEEE---ECCHHHHHHHHHTCSEEEECC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhCceeEee---eCCHHHHHHHHcCCCEEEECC
Confidence 3589999999 9999999999999999999999998764322 22222222 234566777888999999873
|
| >2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=97.26 E-value=0.00051 Score=63.28 Aligned_cols=89 Identities=7% Similarity=-0.054 Sum_probs=55.4
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcchh---hhhcCCCcEE-eecCCCCHHHHHHHhcCccEEEECCcc
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNA---MESFGTYVES-MAGDASNKKFLKTALRGVRSIICPSEG 172 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~---~~~~~~~v~~-v~~D~~d~~~~~~~~~~~d~Vi~~~~g 172 (305)
+++|.|.||+|.+|+.+++.|.+... +++++.+..... .+..+ .+.- ....+.+.+ + +.++|+||.+++.
T Consensus 4 ~~kV~IiGAtG~iG~~llr~L~~~p~~elv~v~s~~~~g~~~~~~~~-~~~g~~~~~~~~~~---~-~~~vDvV~~a~g~ 78 (345)
T 2ozp_A 4 KKTLSIVGASGYAGGEFLRLALSHPYLEVKQVTSRRFAGEPVHFVHP-NLRGRTNLKFVPPE---K-LEPADILVLALPH 78 (345)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCTTEEEEEEBCSTTTTSBGGGTCG-GGTTTCCCBCBCGG---G-CCCCSEEEECCCT
T ss_pred CCEEEEECCCCHHHHHHHHHHHcCCCcEEEEEECchhhCchhHHhCc-hhcCcccccccchh---H-hcCCCEEEEcCCc
Confidence 47999999999999999999997764 888877643221 11111 0000 011122322 2 5799999998664
Q ss_pred h----HhhhhhhcCCCEEEEEccc
Q 021928 173 F----ISNAGSLKGVQHVILLSQL 192 (305)
Q Consensus 173 ~----~~~~a~~~gv~~~V~iSS~ 192 (305)
. ....+.++|+ ++|-+|+.
T Consensus 79 ~~s~~~a~~~~~aG~-~VId~Sa~ 101 (345)
T 2ozp_A 79 GVFAREFDRYSALAP-VLVDLSAD 101 (345)
T ss_dssp THHHHTHHHHHTTCS-EEEECSST
T ss_pred HHHHHHHHHHHHCCC-EEEEcCcc
Confidence 3 3334456676 57777774
|
| >1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D | Back alignment and structure |
|---|
Probab=97.26 E-value=0.00041 Score=62.22 Aligned_cols=93 Identities=12% Similarity=0.079 Sum_probs=60.1
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEECCcchHh
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEGFIS 175 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~g~~~ 175 (305)
.++++|+|+||+|.+|...++.+...|++|+++++++++......-+... ..|..+.+.+.+.+.++|+||. .++...
T Consensus 124 ~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~-~~~~~~~~~~~~~~~~~d~vid-~g~~~~ 201 (302)
T 1iz0_A 124 RPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLALGAEE-AATYAEVPERAKAWGGLDLVLE-VRGKEV 201 (302)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHHTTCSE-EEEGGGHHHHHHHTTSEEEEEE-CSCTTH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCCE-EEECCcchhHHHHhcCceEEEE-CCHHHH
Confidence 35689999999999999999999999999999999876643221111222 2355441334444588999999 765322
Q ss_pred h----hhhhcCCCEEEEEccc
Q 021928 176 N----AGSLKGVQHVILLSQL 192 (305)
Q Consensus 176 ~----~a~~~gv~~~V~iSS~ 192 (305)
. ..+.. .++|.++..
T Consensus 202 ~~~~~~l~~~--G~~v~~g~~ 220 (302)
T 1iz0_A 202 EESLGLLAHG--GRLVYIGAA 220 (302)
T ss_dssp HHHHTTEEEE--EEEEEC---
T ss_pred HHHHHhhccC--CEEEEEeCC
Confidence 2 22223 377777654
|
| >4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=97.25 E-value=0.0014 Score=62.63 Aligned_cols=91 Identities=16% Similarity=0.295 Sum_probs=71.7
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh---hcCCCcEEeecCCCCHHHHHH-HhcCccEEEECCc
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKT-ALRGVRSIICPSE 171 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~---~~~~~v~~v~~D~~d~~~~~~-~~~~~d~Vi~~~~ 171 (305)
.+.++|+|.|| |.+|..+++.| +.+++|.++.+++++... .+ ++..++.+|-+|.+-+.+ -++.+|+++.+++
T Consensus 233 ~~~~~v~I~Gg-G~ig~~lA~~L-~~~~~v~iIE~d~~r~~~la~~l-~~~~Vi~GD~td~~~L~ee~i~~~D~~ia~T~ 309 (461)
T 4g65_A 233 KPYRRIMIVGG-GNIGASLAKRL-EQTYSVKLIERNLQRAEKLSEEL-ENTIVFCGDAADQELLTEENIDQVDVFIALTN 309 (461)
T ss_dssp SCCCEEEEECC-SHHHHHHHHHH-TTTSEEEEEESCHHHHHHHHHHC-TTSEEEESCTTCHHHHHHTTGGGCSEEEECCS
T ss_pred ccccEEEEEcc-hHHHHHHHHHh-hhcCceEEEecCHHHHHHHHHHC-CCceEEeccccchhhHhhcCchhhcEEEEccc
Confidence 34589999998 99999999997 456999999999877433 23 458899999999888765 4788999998855
Q ss_pred ch-----HhhhhhhcCCCEEEEE
Q 021928 172 GF-----ISNAGSLKGVQHVILL 189 (305)
Q Consensus 172 g~-----~~~~a~~~gv~~~V~i 189 (305)
.. ..-.|++.|++++|-.
T Consensus 310 ~De~Ni~~~llAk~~gv~kvIa~ 332 (461)
T 4g65_A 310 EDETNIMSAMLAKRMGAKKVMVL 332 (461)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEE
T ss_pred CcHHHHHHHHHHHHcCCcccccc
Confidence 32 3445788999998865
|
| >4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=97.25 E-value=0.00033 Score=64.39 Aligned_cols=92 Identities=15% Similarity=0.155 Sum_probs=60.4
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh--hcCCCcEEeecCCCCH---HHHHHHh-cCccEEEEC
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME--SFGTYVESMAGDASNK---KFLKTAL-RGVRSIICP 169 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~--~~~~~v~~v~~D~~d~---~~~~~~~-~~~d~Vi~~ 169 (305)
.++++|||+||+|.||..+++.+...|++|++++|++++... .++.. .+ .|..+. +.+.+.. .++|+||.+
T Consensus 166 ~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~-~~--~~~~~~~~~~~~~~~~~~g~Dvvid~ 242 (353)
T 4dup_A 166 TEGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACERLGAK-RG--INYRSEDFAAVIKAETGQGVDIILDM 242 (353)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCS-EE--EETTTSCHHHHHHHHHSSCEEEEEES
T ss_pred CCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCC-EE--EeCCchHHHHHHHHHhCCCceEEEEC
Confidence 356899999999999999999999999999999998876432 23321 12 344332 3333332 368999988
Q ss_pred CcchH-hhh---hhhcCCCEEEEEccc
Q 021928 170 SEGFI-SNA---GSLKGVQHVILLSQL 192 (305)
Q Consensus 170 ~~g~~-~~~---a~~~gv~~~V~iSS~ 192 (305)
.++.. ..+ ++.. .++|.++..
T Consensus 243 ~g~~~~~~~~~~l~~~--G~iv~~g~~ 267 (353)
T 4dup_A 243 IGAAYFERNIASLAKD--GCLSIIAFL 267 (353)
T ss_dssp CCGGGHHHHHHTEEEE--EEEEECCCT
T ss_pred CCHHHHHHHHHHhccC--CEEEEEEec
Confidence 65432 222 2222 367777654
|
| >2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A* | Back alignment and structure |
|---|
Probab=97.25 E-value=0.00029 Score=64.75 Aligned_cols=90 Identities=18% Similarity=0.199 Sum_probs=60.6
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcchhhhh---cCCCcEEeecCCCCH---HHHHHHhc-CccEEEECC
Q 021928 99 DAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMES---FGTYVESMAGDASNK---KFLKTALR-GVRSIICPS 170 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~---~~~~v~~v~~D~~d~---~~~~~~~~-~~d~Vi~~~ 170 (305)
++|+|+||+|.||..+++.+...|+ +|+++++++++.... ++. . ...|..+. +.+.+... ++|+||.++
T Consensus 162 ~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~g~--~-~~~d~~~~~~~~~~~~~~~~~~d~vi~~~ 238 (357)
T 2zb4_A 162 KTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGF--D-AAINYKKDNVAEQLRESCPAGVDVYFDNV 238 (357)
T ss_dssp CEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCC--S-EEEETTTSCHHHHHHHHCTTCEEEEEESC
T ss_pred cEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCC--c-eEEecCchHHHHHHHHhcCCCCCEEEECC
Confidence 8999999999999999999999999 999999987653322 332 2 22455542 23333333 689999886
Q ss_pred cchHhh----hhhhcCCCEEEEEcccc
Q 021928 171 EGFISN----AGSLKGVQHVILLSQLS 193 (305)
Q Consensus 171 ~g~~~~----~a~~~gv~~~V~iSS~~ 193 (305)
++.... .++.. .++|.++...
T Consensus 239 G~~~~~~~~~~l~~~--G~iv~~G~~~ 263 (357)
T 2zb4_A 239 GGNISDTVISQMNEN--SHIILCGQIS 263 (357)
T ss_dssp CHHHHHHHHHTEEEE--EEEEECCCGG
T ss_pred CHHHHHHHHHHhccC--cEEEEECCcc
Confidence 643222 22223 4788876554
|
| >2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A* | Back alignment and structure |
|---|
Probab=97.23 E-value=0.00041 Score=64.04 Aligned_cols=94 Identities=18% Similarity=0.192 Sum_probs=61.4
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh--hcCCCcEEeecCCCC--H-HHHHHHh-cCccEEEEC
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME--SFGTYVESMAGDASN--K-KFLKTAL-RGVRSIICP 169 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~--~~~~~v~~v~~D~~d--~-~~~~~~~-~~~d~Vi~~ 169 (305)
.++++|||+||+|.||...++.+...|++|+++++++++... .++. ..+ .|..+ . +.+.+.. .++|+||.+
T Consensus 162 ~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~Ga--~~~-~~~~~~~~~~~~~~~~~~g~D~vid~ 238 (362)
T 2c0c_A 162 SEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKSLGC--DRP-INYKTEPVGTVLKQEYPEGVDVVYES 238 (362)
T ss_dssp CTTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTC--SEE-EETTTSCHHHHHHHHCTTCEEEEEEC
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCC--cEE-EecCChhHHHHHHHhcCCCCCEEEEC
Confidence 356899999999999999999999999999999998765332 2332 221 23333 2 2333332 368999988
Q ss_pred CcchHh----hhhhhcCCCEEEEEccccc
Q 021928 170 SEGFIS----NAGSLKGVQHVILLSQLSV 194 (305)
Q Consensus 170 ~~g~~~----~~a~~~gv~~~V~iSS~~~ 194 (305)
.++... +.++.. .++|.+++...
T Consensus 239 ~g~~~~~~~~~~l~~~--G~iv~~g~~~~ 265 (362)
T 2c0c_A 239 VGGAMFDLAVDALATK--GRLIVIGFISG 265 (362)
T ss_dssp SCTHHHHHHHHHEEEE--EEEEECCCGGG
T ss_pred CCHHHHHHHHHHHhcC--CEEEEEeCCCC
Confidence 554322 222333 38888876543
|
| >1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B* | Back alignment and structure |
|---|
Probab=97.22 E-value=0.0014 Score=57.48 Aligned_cols=91 Identities=9% Similarity=0.045 Sum_probs=63.6
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCc-------------------chhhh------hcCC--CcEEeec
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDK-------------------RNAME------SFGT--YVESMAG 148 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~-------------------~~~~~------~~~~--~v~~v~~ 148 (305)
..++|+|.|+ |++|+++++.|+..|. +|.+++++. .+... ...+ .++.+..
T Consensus 30 ~~~~VlVvG~-Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~ 108 (249)
T 1jw9_B 30 KDSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVNA 108 (249)
T ss_dssp HHCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECS
T ss_pred hCCeEEEEee-CHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEEec
Confidence 3489999997 8999999999999997 888888876 33211 1122 3445555
Q ss_pred CCCCHHHHHHHhcCccEEEECCcch-----HhhhhhhcCCCEEEEEc
Q 021928 149 DASNKKFLKTALRGVRSIICPSEGF-----ISNAGSLKGVQHVILLS 190 (305)
Q Consensus 149 D~~d~~~~~~~~~~~d~Vi~~~~g~-----~~~~a~~~gv~~~V~iS 190 (305)
++.+ +.+.+.++++|+||.+.+.. +.+++.+.+++ +|..+
T Consensus 109 ~~~~-~~~~~~~~~~DvVi~~~d~~~~~~~l~~~~~~~~~p-~i~~~ 153 (249)
T 1jw9_B 109 LLDD-AELAALIAEHDLVLDCTDNVAVRNQLNAGCFAAKVP-LVSGA 153 (249)
T ss_dssp CCCH-HHHHHHHHTSSEEEECCSSHHHHHHHHHHHHHHTCC-EEEEE
T ss_pred cCCH-hHHHHHHhCCCEEEEeCCCHHHHHHHHHHHHHcCCC-EEEee
Confidence 5653 56778889999999885532 45566777765 44443
|
| >2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A* | Back alignment and structure |
|---|
Probab=97.21 E-value=0.00076 Score=62.00 Aligned_cols=91 Identities=16% Similarity=0.129 Sum_probs=61.2
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh--hcCCCcEEeecCCCCH---HHHHHHhc--CccEEEEC
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME--SFGTYVESMAGDASNK---KFLKTALR--GVRSIICP 169 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~--~~~~~v~~v~~D~~d~---~~~~~~~~--~~d~Vi~~ 169 (305)
++++|+|+||+|.||..+++.+...|++|++++|++++... .++. . ...|..+. +.+.+... ++|++|.+
T Consensus 162 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~g~--~-~~~~~~~~~~~~~~~~~~~~~~~d~vi~~ 238 (354)
T 2j8z_A 162 AGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAEKLGA--A-AGFNYKKEDFSEATLKFTKGAGVNLILDC 238 (354)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTC--S-EEEETTTSCHHHHHHHHTTTSCEEEEEES
T ss_pred CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCC--c-EEEecCChHHHHHHHHHhcCCCceEEEEC
Confidence 46899999999999999999999999999999998766332 2332 2 22355442 34444443 68999988
Q ss_pred CcchH-hhh---hhhcCCCEEEEEccc
Q 021928 170 SEGFI-SNA---GSLKGVQHVILLSQL 192 (305)
Q Consensus 170 ~~g~~-~~~---a~~~gv~~~V~iSS~ 192 (305)
+++.. ..+ ++.. .++|.++..
T Consensus 239 ~G~~~~~~~~~~l~~~--G~iv~~G~~ 263 (354)
T 2j8z_A 239 IGGSYWEKNVNCLALD--GRWVLYGLM 263 (354)
T ss_dssp SCGGGHHHHHHHEEEE--EEEEECCCT
T ss_pred CCchHHHHHHHhccCC--CEEEEEecc
Confidence 65432 222 2223 378877654
|
| >3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A* | Back alignment and structure |
|---|
Probab=97.20 E-value=0.0009 Score=60.77 Aligned_cols=74 Identities=9% Similarity=0.079 Sum_probs=55.1
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcC---cchhhhh---cC--CCcEEeecCCCCHHHHHHHhcCccEE
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKD---KRNAMES---FG--TYVESMAGDASNKKFLKTALRGVRSI 166 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~---~~~~~~~---~~--~~v~~v~~D~~d~~~~~~~~~~~d~V 166 (305)
...++++|+|| |++|+.++..|++.|. +|+++.|+ .+++.+. +. ....+...++.+.+.+.+.+.++|.|
T Consensus 146 l~gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~~l~~~~~~l~~~DiI 224 (312)
T 3t4e_A 146 MRGKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLADQHAFTEALASADIL 224 (312)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHHCSEE
T ss_pred cCCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccCcceEEechHhhhhhHhhccCceEE
Confidence 35689999998 9999999999999998 89999999 5554332 11 12334455666655556778889999
Q ss_pred EECC
Q 021928 167 ICPS 170 (305)
Q Consensus 167 i~~~ 170 (305)
|+++
T Consensus 225 INaT 228 (312)
T 3t4e_A 225 TNGT 228 (312)
T ss_dssp EECS
T ss_pred EECC
Confidence 9883
|
| >1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5 | Back alignment and structure |
|---|
Probab=97.20 E-value=0.00015 Score=64.39 Aligned_cols=69 Identities=16% Similarity=0.099 Sum_probs=48.2
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh---cCCCcEEeecCCCCHHHHHHHhcCccEEEECCc
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALRGVRSIICPSE 171 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~ 171 (305)
.+++++|+|+ |++|+.+++.|++.|++|+++.|++++..+. ++....+...|+ +.+.+ .++|+||++++
T Consensus 118 ~~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~~~~~~~~~---~~~~~--~~~DivVn~t~ 189 (271)
T 1nyt_A 118 PGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQALSM---DELEG--HEFDLIINATS 189 (271)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSEEECCS---GGGTT--CCCSEEEECCS
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhccCCeeEecH---HHhcc--CCCCEEEECCC
Confidence 4689999998 8999999999999999999999998664322 221001222333 22222 58999998854
|
| >3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A | Back alignment and structure |
|---|
Probab=97.18 E-value=0.00058 Score=61.19 Aligned_cols=72 Identities=13% Similarity=0.222 Sum_probs=53.4
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcchhhhh---cC---CCcEEeecCCCCHHHHHHHhcCccEEEE
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMES---FG---TYVESMAGDASNKKFLKTALRGVRSIIC 168 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~---~~---~~v~~v~~D~~d~~~~~~~~~~~d~Vi~ 168 (305)
...++++|+|| |++|+.++..|++.|. +|+++.|+++++.+. +. ..+.+...++.+ +.+.+.++|.||+
T Consensus 125 l~~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~~~---l~~~l~~~DiVIn 200 (283)
T 3jyo_A 125 AKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDARG---IEDVIAAADGVVN 200 (283)
T ss_dssp CCCSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECSTT---HHHHHHHSSEEEE
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCHHH---HHHHHhcCCEEEE
Confidence 35689999998 9999999999999998 799999998774432 11 123444445433 5567788999998
Q ss_pred CCc
Q 021928 169 PSE 171 (305)
Q Consensus 169 ~~~ 171 (305)
+++
T Consensus 201 aTp 203 (283)
T 3jyo_A 201 ATP 203 (283)
T ss_dssp CSS
T ss_pred CCC
Confidence 843
|
| >3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A | Back alignment and structure |
|---|
Probab=97.16 E-value=0.00095 Score=61.92 Aligned_cols=87 Identities=17% Similarity=0.213 Sum_probs=52.6
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCC---eEEEEEc--CcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEECCcc
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRT---RIKALVK--DKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG 172 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~---~V~~~~R--~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~g 172 (305)
+++|.|.||||++|+++++.|.+.++ ++..+.- +..+... +.. .+...-++.. ..+.++|+||.+++.
T Consensus 2 ~~kVaIvGATG~vG~eLlrlL~~~~~p~~el~~~as~~saG~~~~-~~~-~~~~~~~~~~-----~~~~~~Dvvf~a~~~ 74 (366)
T 3pwk_A 2 GYTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASARSAGKSLK-FKD-QDITIEETTE-----TAFEGVDIALFSAGS 74 (366)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCCCCEEEEEEEECTTTTTCEEE-ETT-EEEEEEECCT-----TTTTTCSEEEECSCH
T ss_pred CcEEEEECCCChHHHHHHHHHhcCCCCcEEEEEEEccccCCCcce-ecC-CCceEeeCCH-----HHhcCCCEEEECCCh
Confidence 57999999999999999999998765 3444432 2222111 111 1222222221 126799999998765
Q ss_pred hH----hhhhhhcCCCEEEEEccc
Q 021928 173 FI----SNAGSLKGVQHVILLSQL 192 (305)
Q Consensus 173 ~~----~~~a~~~gv~~~V~iSS~ 192 (305)
.. .....+.|+ ++|-.|+.
T Consensus 75 ~~s~~~a~~~~~~G~-~vIDlSa~ 97 (366)
T 3pwk_A 75 STSAKYAPYAVKAGV-VVVDNTSY 97 (366)
T ss_dssp HHHHHHHHHHHHTTC-EEEECSST
T ss_pred HhHHHHHHHHHHCCC-EEEEcCCc
Confidence 42 333455676 56667765
|
| >3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A* | Back alignment and structure |
|---|
Probab=97.14 E-value=0.001 Score=60.25 Aligned_cols=93 Identities=12% Similarity=0.096 Sum_probs=61.6
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh--hcCCCcEEeecCCCC---HHHHHHHhc--CccEEEE
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME--SFGTYVESMAGDASN---KKFLKTALR--GVRSIIC 168 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~--~~~~~v~~v~~D~~d---~~~~~~~~~--~~d~Vi~ 168 (305)
.++++|||+||+|.+|...++.+...|++|+++++++++... .++.. .+ .|..+ .+.+.+... ++|+||.
T Consensus 139 ~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~Ga~-~~--~~~~~~~~~~~~~~~~~~~g~Dvvid 215 (325)
T 3jyn_A 139 KPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAKALGAW-ET--IDYSHEDVAKRVLELTDGKKCPVVYD 215 (325)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTCS-EE--EETTTSCHHHHHHHHTTTCCEEEEEE
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCC-EE--EeCCCccHHHHHHHHhCCCCceEEEE
Confidence 356899999999999999999999999999999998766432 23321 22 34433 344444443 6899998
Q ss_pred CCcch-Hhhh---hhhcCCCEEEEEcccc
Q 021928 169 PSEGF-ISNA---GSLKGVQHVILLSQLS 193 (305)
Q Consensus 169 ~~~g~-~~~~---a~~~gv~~~V~iSS~~ 193 (305)
+.++. +..+ .+.. .++|.++...
T Consensus 216 ~~g~~~~~~~~~~l~~~--G~iv~~g~~~ 242 (325)
T 3jyn_A 216 GVGQDTWLTSLDSVAPR--GLVVSFGNAS 242 (325)
T ss_dssp SSCGGGHHHHHTTEEEE--EEEEECCCTT
T ss_pred CCChHHHHHHHHHhcCC--CEEEEEecCC
Confidence 85543 2222 2223 4788776543
|
| >3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A* | Back alignment and structure |
|---|
Probab=97.12 E-value=0.00055 Score=61.16 Aligned_cols=68 Identities=9% Similarity=0.023 Sum_probs=53.3
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEECCc
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE 171 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~ 171 (305)
.+++++|+|+ |++|+.++..|.+.|+ +|+++.|+++++.+... .+..+ ..+++.+++.++|+||++++
T Consensus 116 ~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~-~~~~~-----~~~~~~~~~~~aDiVInaTp 184 (277)
T 3don_A 116 EDAYILILGA-GGASKGIANELYKIVRPTLTVANRTMSRFNNWSL-NINKI-----NLSHAESHLDEFDIIINTTP 184 (277)
T ss_dssp GGCCEEEECC-SHHHHHHHHHHHTTCCSCCEEECSCGGGGTTCCS-CCEEE-----CHHHHHHTGGGCSEEEECCC
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHH-hcccc-----cHhhHHHHhcCCCEEEECcc
Confidence 4589999997 8999999999999998 89999999877654432 23222 34567778889999998843
|
| >3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=97.11 E-value=8.7e-05 Score=59.26 Aligned_cols=66 Identities=6% Similarity=0.116 Sum_probs=49.7
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh---hcCCCcEEeecCCCCHHHHHHHhcCccEEEECCc
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALRGVRSIICPSE 171 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~---~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~ 171 (305)
.++|+|+|+ |.+|+.+++.|...|++|++..|++++..+ .++ .... +.. ++.++++++|+||.+++
T Consensus 21 ~~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~~--~~~~--~~~---~~~~~~~~~Divi~at~ 89 (144)
T 3oj0_A 21 GNKILLVGN-GMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKYE--YEYV--LIN---DIDSLIKNNDVIITATS 89 (144)
T ss_dssp CCEEEEECC-SHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHHT--CEEE--ECS---CHHHHHHTCSEEEECSC
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHhC--CceE--eec---CHHHHhcCCCEEEEeCC
Confidence 589999997 999999999999999999999999876433 222 2222 222 34566789999998844
|
| >2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus} | Back alignment and structure |
|---|
Probab=97.10 E-value=0.00096 Score=60.10 Aligned_cols=71 Identities=15% Similarity=0.045 Sum_probs=53.0
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcchhhhh---cCCCcEEeecCCCCHHHHHHHhcCccEEEECCc
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALRGVRSIICPSE 171 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~---~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~ 171 (305)
...++|+|+|+ |++|+.++..|++.|+ +|++..|+++++.+. ++.... ++.+.+++.+.+.++|+||++++
T Consensus 139 l~~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~~----~~~~~~~~~~~~~~aDivIn~t~ 213 (297)
T 2egg_A 139 LDGKRILVIGA-GGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERRS----AYFSLAEAETRLAEYDIIINTTS 213 (297)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSSC----CEECHHHHHHTGGGCSEEEECSC
T ss_pred CCCCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhccC----ceeeHHHHHhhhccCCEEEECCC
Confidence 34689999998 8999999999999997 999999998765432 222110 12233567788899999998843
|
| >1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A* | Back alignment and structure |
|---|
Probab=97.09 E-value=0.0018 Score=59.84 Aligned_cols=90 Identities=11% Similarity=0.128 Sum_probs=64.6
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh---hcCCCcEEeecCCCCHHHHHHHhcCccEEEECCcc-
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG- 172 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~---~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~g- 172 (305)
++.+|||+|+ |.||...++.+...|++|+++++++++... .++ ... ..|..+.+.+.++..++|+||.+.++
T Consensus 187 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~lG--a~~-v~~~~~~~~~~~~~~~~D~vid~~g~~ 262 (366)
T 1yqd_A 187 PGKHIGIVGL-GGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFG--ADS-FLVSRDQEQMQAAAGTLDGIIDTVSAV 262 (366)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTSC--CSE-EEETTCHHHHHHTTTCEEEEEECCSSC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcC--Cce-EEeccCHHHHHHhhCCCCEEEECCCcH
Confidence 5689999996 999999999999999999999998876433 233 222 24666777777777889999987442
Q ss_pred -hHh---hhhhhcCCCEEEEEccc
Q 021928 173 -FIS---NAGSLKGVQHVILLSQL 192 (305)
Q Consensus 173 -~~~---~~a~~~gv~~~V~iSS~ 192 (305)
.+. +.++.. .++|.+++.
T Consensus 263 ~~~~~~~~~l~~~--G~iv~~g~~ 284 (366)
T 1yqd_A 263 HPLLPLFGLLKSH--GKLILVGAP 284 (366)
T ss_dssp CCSHHHHHHEEEE--EEEEECCCC
T ss_pred HHHHHHHHHHhcC--CEEEEEccC
Confidence 222 233333 378888764
|
| >1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A | Back alignment and structure |
|---|
Probab=97.09 E-value=0.0015 Score=59.67 Aligned_cols=93 Identities=10% Similarity=0.065 Sum_probs=60.8
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCC---HHHHHHHhcCccEEEECCcc
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASN---KKFLKTALRGVRSIICPSEG 172 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d---~~~~~~~~~~~d~Vi~~~~g 172 (305)
.++++|||+|| |.+|..+++.+...|++|++++|++++......-+... ..|..+ .+.+.++..++|+||.+.++
T Consensus 163 ~~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~~-~~d~~~~~~~~~~~~~~~~~d~vid~~g~ 240 (339)
T 1rjw_A 163 KPGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKELGADL-VVNPLKEDAAKFMKEKVGGVHAAVVTAVS 240 (339)
T ss_dssp CTTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSE-EECTTTSCHHHHHHHHHSSEEEEEESSCC
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHCCCCE-EecCCCccHHHHHHHHhCCCCEEEECCCC
Confidence 35689999999 77999999999999999999999876643221112222 245553 23344444689999988553
Q ss_pred --hHhh---hhhhcCCCEEEEEccc
Q 021928 173 --FISN---AGSLKGVQHVILLSQL 192 (305)
Q Consensus 173 --~~~~---~a~~~gv~~~V~iSS~ 192 (305)
.+.. ..+.. .++|.++..
T Consensus 241 ~~~~~~~~~~l~~~--G~~v~~g~~ 263 (339)
T 1rjw_A 241 KPAFQSAYNSIRRG--GACVLVGLP 263 (339)
T ss_dssp HHHHHHHHHHEEEE--EEEEECCCC
T ss_pred HHHHHHHHHHhhcC--CEEEEeccc
Confidence 2222 23333 378877654
|
| >1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii} | Back alignment and structure |
|---|
Probab=97.08 E-value=0.0012 Score=61.01 Aligned_cols=95 Identities=13% Similarity=0.010 Sum_probs=54.6
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCC-CeEEEEEcCcch----hhhhcCCCc----EEeecCCCCH-HHHHHHhc-CccE
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRN----AMESFGTYV----ESMAGDASNK-KFLKTALR-GVRS 165 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~R~~~~----~~~~~~~~v----~~v~~D~~d~-~~~~~~~~-~~d~ 165 (305)
|+++|.|.||+|.+|+.+++.|.+.. .+|+++.+++.. ..+..+... ..-..|+.-. .+..+.++ ++|+
T Consensus 7 M~~kV~IiGAtG~iG~~llr~L~~~p~~ev~~i~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv 86 (354)
T 1ys4_A 7 MKIKVGVLGATGSVGQRFVQLLADHPMFELTALAASERSAGKKYKDACYWFQDRDIPENIKDMVVIPTDPKHEEFEDVDI 86 (354)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEECTTTTTSBHHHHSCCCCSSCCCHHHHTCBCEESCTTSGGGTTCCE
T ss_pred ccceEEEECcCCHHHHHHHHHHhcCCCCEEEEEEcccccccccHHHhcccccccccccCceeeEEEeCCHHHHhcCCCCE
Confidence 34799999999999999999998775 588888764322 111111110 0000111100 01122346 8999
Q ss_pred EEECCcch----HhhhhhhcCCCEEEEEccc
Q 021928 166 IICPSEGF----ISNAGSLKGVQHVILLSQL 192 (305)
Q Consensus 166 Vi~~~~g~----~~~~a~~~gv~~~V~iSS~ 192 (305)
||.+.+.. ....+.+.|++ +|-.|+.
T Consensus 87 V~~atp~~~~~~~a~~~~~aG~~-VId~s~~ 116 (354)
T 1ys4_A 87 VFSALPSDLAKKFEPEFAKEGKL-IFSNASA 116 (354)
T ss_dssp EEECCCHHHHHHHHHHHHHTTCE-EEECCST
T ss_pred EEECCCchHHHHHHHHHHHCCCE-EEECCch
Confidence 99997643 33344556764 6655654
|
| >1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A | Back alignment and structure |
|---|
Probab=97.08 E-value=0.0012 Score=61.00 Aligned_cols=89 Identities=10% Similarity=0.070 Sum_probs=56.7
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcchh---hhh---cCCCcEEeecCCCCHHHHHHHhcCccEEEECC
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNA---MES---FGTYVESMAGDASNKKFLKTALRGVRSIICPS 170 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~---~~~---~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~ 170 (305)
+++|.|.||+|.+|+.+++.|.+... +++++.+..+.. ... +...+ ..|+.-.+ .+.+.++|+||.++
T Consensus 16 ~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~~~~~g~~~~~~~~~~~~~v---~~dl~~~~--~~~~~~vDvVf~at 90 (359)
T 1xyg_A 16 DIRIGLLGASGYTGAEIVRLLANHPHFQVTLMTADRKAGQSMESVFPHLRAQK---LPTLVSVK--DADFSTVDAVFCCL 90 (359)
T ss_dssp CEEEEEECCSSHHHHHHHHHHHTCSSEEEEEEBCSTTTTSCHHHHCGGGTTSC---CCCCBCGG--GCCGGGCSEEEECC
T ss_pred CcEEEEECcCCHHHHHHHHHHHcCCCcEEEEEeCchhcCCCHHHhCchhcCcc---cccceecc--hhHhcCCCEEEEcC
Confidence 36999999999999999999998764 888887643221 111 11111 13332222 34567899999986
Q ss_pred cch----HhhhhhhcCCCEEEEEcccc
Q 021928 171 EGF----ISNAGSLKGVQHVILLSQLS 193 (305)
Q Consensus 171 ~g~----~~~~a~~~gv~~~V~iSS~~ 193 (305)
+.. ....+ +.|+ ++|-.|+..
T Consensus 91 p~~~s~~~a~~~-~aG~-~VId~sa~~ 115 (359)
T 1xyg_A 91 PHGTTQEIIKEL-PTAL-KIVDLSADF 115 (359)
T ss_dssp CTTTHHHHHHTS-CTTC-EEEECSSTT
T ss_pred CchhHHHHHHHH-hCCC-EEEECCccc
Confidence 532 34445 6676 577777753
|
| >1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A* | Back alignment and structure |
|---|
Probab=97.07 E-value=0.0018 Score=56.66 Aligned_cols=93 Identities=11% Similarity=0.120 Sum_probs=59.0
Q ss_pred CEEEEEcCCChHHHHHHHHHHhC-CCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHh-----cCccEEEECCc-
Q 021928 99 DAVLVTDGDSDIGQMVILSLIVK-RTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTAL-----RGVRSIICPSE- 171 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~-----~~~d~Vi~~~~- 171 (305)
++|+|.|++|.+|+.+++.+.+. +++++++.+......+....... +..|++.++...+.+ .+++.|+.+++
T Consensus 1 mkV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~dl~~~~~~~~D-vvIDfT~p~a~~~~~~~a~~~g~~~VigTTG~ 79 (245)
T 1p9l_A 1 MRVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGDPLSLLTDGNTE-VVIDFTHPDVVMGNLEFLIDNGIHAVVGTTGF 79 (245)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTCCTHHHHHTTCC-EEEECSCTTTHHHHHHHHHHTTCEEEECCCCC
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCCCHHHHhccCCc-EEEEccChHHHHHHHHHHHHcCCCEEEcCCCC
Confidence 58999999999999999999866 89999877654433332222233 567787765554333 36788886633
Q ss_pred --c---hHhhhhhhc-CCCEEEEEcccc
Q 021928 172 --G---FISNAGSLK-GVQHVILLSQLS 193 (305)
Q Consensus 172 --g---~~~~~a~~~-gv~~~V~iSS~~ 193 (305)
. .+.+++++. ++ .+++.+.++
T Consensus 80 ~~e~~~~l~~aa~~~~~~-~vv~a~N~s 106 (245)
T 1p9l_A 80 TAERFQQVESWLVAKPNT-SVLIAPNFA 106 (245)
T ss_dssp CHHHHHHHHHHHHTSTTC-EEEECSCCC
T ss_pred CHHHHHHHHHHHHhCCCC-CEEEECCcc
Confidence 1 133444544 44 455555543
|
| >2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis} | Back alignment and structure |
|---|
Probab=97.04 E-value=0.00035 Score=62.59 Aligned_cols=73 Identities=7% Similarity=-0.063 Sum_probs=47.8
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEee--------cCCCCHHHHHHHhcCccEEEEC
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMA--------GDASNKKFLKTALRGVRSIICP 169 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~--------~D~~d~~~~~~~~~~~d~Vi~~ 169 (305)
+|+|+|.|+ |.+|..++..|++.|++|+++.|++++.......++.... .+..+.+.+.++++++|.||.+
T Consensus 3 ~m~i~iiG~-G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~ 81 (316)
T 2ew2_A 3 AMKIAIAGA-GAMGSRLGIMLHQGGNDVTLIDQWPAHIEAIRKNGLIADFNGEEVVANLPIFSPEEIDHQNEQVDLIIAL 81 (316)
T ss_dssp -CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHCEEEEETTEEEEECCCEECGGGCCTTSCCCSEEEEC
T ss_pred CCeEEEECc-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhCCEEEEeCCCeeEecceeecchhhcccCCCCCEEEEE
Confidence 479999997 9999999999999999999999987664332111122211 1111222233344588988887
Q ss_pred Cc
Q 021928 170 SE 171 (305)
Q Consensus 170 ~~ 171 (305)
.+
T Consensus 82 v~ 83 (316)
T 2ew2_A 82 TK 83 (316)
T ss_dssp SC
T ss_pred ec
Confidence 44
|
| >1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A* | Back alignment and structure |
|---|
Probab=97.03 E-value=0.00037 Score=63.40 Aligned_cols=69 Identities=17% Similarity=0.234 Sum_probs=47.9
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCC--CeEEEEEcCcchhh-hhcCCCcEEeecCCCC---HHHHHHHhcCccEEEEC
Q 021928 99 DAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRNAM-ESFGTYVESMAGDASN---KKFLKTALRGVRSIICP 169 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~~~g--~~V~~~~R~~~~~~-~~~~~~v~~v~~D~~d---~~~~~~~~~~~d~Vi~~ 169 (305)
|+|.|+||+|++|+.++..|+..| .+|+++++++.+.. ..+..... ..++.. .++++++++++|+||++
T Consensus 1 mKI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~~~~~a~dL~~~~~--~~~l~~~~~t~d~~~a~~~aDvVvi~ 75 (314)
T 1mld_A 1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIET--RATVKGYLGPEQLPDCLKGCDVVVIP 75 (314)
T ss_dssp CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHHHHTTSSS--SCEEEEEESGGGHHHHHTTCSEEEEC
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCccHHHHHHHhccCc--CceEEEecCCCCHHHHhCCCCEEEEC
Confidence 589999999999999999999888 68999998873211 01111110 011211 13467789999999988
|
| >3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A* | Back alignment and structure |
|---|
Probab=96.98 E-value=0.0017 Score=58.96 Aligned_cols=92 Identities=15% Similarity=0.069 Sum_probs=61.0
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh--hcCCCcEEeecCCCC---HHHHHHHhc--CccEEEE
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME--SFGTYVESMAGDASN---KKFLKTALR--GVRSIIC 168 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~--~~~~~v~~v~~D~~d---~~~~~~~~~--~~d~Vi~ 168 (305)
.++++|||+||+|.||...++.+...|.+|+++++++++... .++.. .+ .|..+ .+.+.+... ++|+||.
T Consensus 147 ~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~-~~--~~~~~~~~~~~~~~~~~~~g~D~vid 223 (334)
T 3qwb_A 147 KKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAKEYGAE-YL--INASKEDILRQVLKFTNGKGVDASFD 223 (334)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCS-EE--EETTTSCHHHHHHHHTTTSCEEEEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCc-EE--EeCCCchHHHHHHHHhCCCCceEEEE
Confidence 457899999999999999999999999999999998766432 23321 22 23333 344444443 6899998
Q ss_pred CCcchHh----hhhhhcCCCEEEEEccc
Q 021928 169 PSEGFIS----NAGSLKGVQHVILLSQL 192 (305)
Q Consensus 169 ~~~g~~~----~~a~~~gv~~~V~iSS~ 192 (305)
+.++... +..+.. .++|.++..
T Consensus 224 ~~g~~~~~~~~~~l~~~--G~iv~~G~~ 249 (334)
T 3qwb_A 224 SVGKDTFEISLAALKRK--GVFVSFGNA 249 (334)
T ss_dssp CCGGGGHHHHHHHEEEE--EEEEECCCT
T ss_pred CCChHHHHHHHHHhccC--CEEEEEcCC
Confidence 8654322 222333 377777654
|
| >3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A | Back alignment and structure |
|---|
Probab=96.97 E-value=0.0027 Score=58.89 Aligned_cols=71 Identities=13% Similarity=0.111 Sum_probs=57.3
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEEC
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 169 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~ 169 (305)
.++++|+|.|+ |.+|+.+++.+.+.|++|++++.++........ -+++..|+.|.+.+.++.+.+|+|..-
T Consensus 10 ~~~~~IlIlG~-G~lg~~la~aa~~lG~~viv~d~~~~~p~~~~a--d~~~~~~~~d~~~l~~~~~~~dvi~~~ 80 (377)
T 3orq_A 10 KFGATIGIIGG-GQLGKMMAQSAQKMGYKVVVLDPSEDCPCRYVA--HEFIQAKYDDEKALNQLGQKCDVITYE 80 (377)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCTTCTTGGGS--SEEEECCTTCHHHHHHHHHHCSEEEES
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECCCCChhhhhC--CEEEECCCCCHHHHHHHHHhCCcceec
Confidence 35689999997 899999999999999999999877654322232 256779999999999999889988753
|
| >1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A* | Back alignment and structure |
|---|
Probab=96.97 E-value=0.0018 Score=59.13 Aligned_cols=93 Identities=13% Similarity=0.125 Sum_probs=60.7
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhC-CCeEEEEEcCcchhhh--hcCCCcEEeecCCCC---HHHHHHHh--cCccEEEE
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVK-RTRIKALVKDKRNAME--SFGTYVESMAGDASN---KKFLKTAL--RGVRSIIC 168 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~R~~~~~~~--~~~~~v~~v~~D~~d---~~~~~~~~--~~~d~Vi~ 168 (305)
++++|+|+||+|.||..+++.+... |++|+++++++++... .++. .. ..|..+ .+.+.+.. .++|+||.
T Consensus 170 ~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~~~g~--~~-~~~~~~~~~~~~~~~~~~~~~~d~vi~ 246 (347)
T 1jvb_A 170 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGA--DY-VINASMQDPLAEIRRITESKGVDAVID 246 (347)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHTC--SE-EEETTTSCHHHHHHHHTTTSCEEEEEE
T ss_pred CCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCC--CE-EecCCCccHHHHHHHHhcCCCceEEEE
Confidence 5689999999999999999999998 9999999998766332 2332 11 234444 23355555 37899998
Q ss_pred CCcch--Hhhhhhhc-CCCEEEEEccc
Q 021928 169 PSEGF--ISNAGSLK-GVQHVILLSQL 192 (305)
Q Consensus 169 ~~~g~--~~~~a~~~-gv~~~V~iSS~ 192 (305)
++++. +..+.+.. .-.++|.++..
T Consensus 247 ~~g~~~~~~~~~~~l~~~G~iv~~g~~ 273 (347)
T 1jvb_A 247 LNNSEKTLSVYPKALAKQGKYVMVGLF 273 (347)
T ss_dssp SCCCHHHHTTGGGGEEEEEEEEECCSS
T ss_pred CCCCHHHHHHHHHHHhcCCEEEEECCC
Confidence 86543 22222221 12378877653
|
| >2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A* | Back alignment and structure |
|---|
Probab=96.94 E-value=0.00072 Score=62.99 Aligned_cols=70 Identities=13% Similarity=0.029 Sum_probs=54.4
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhh---hhcCCCcEEeecCCCCHHHHHHHhcCccEEEEC
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM---ESFGTYVESMAGDASNKKFLKTALRGVRSIICP 169 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~---~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~ 169 (305)
..+++|+|+|+ |.||+.+++.+...|++|++++|++++.. +.++..+. .+..+.+.+.+.+.++|+||.+
T Consensus 166 l~g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~g~~~~---~~~~~~~~l~~~l~~aDvVi~~ 238 (377)
T 2vhw_A 166 VEPADVVVIGA-GTAGYNAARIANGMGATVTVLDINIDKLRQLDAEFCGRIH---TRYSSAYELEGAVKRADLVIGA 238 (377)
T ss_dssp BCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSSE---EEECCHHHHHHHHHHCSEEEEC
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhcCCeeE---eccCCHHHHHHHHcCCCEEEEC
Confidence 35699999998 99999999999999999999999886633 22333222 2334566788888899999986
|
| >4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=96.91 E-value=0.0026 Score=58.06 Aligned_cols=93 Identities=18% Similarity=0.205 Sum_probs=58.9
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh--hcCCCcEEeecCCCC-HHHHHHHhc--CccEEEECC
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME--SFGTYVESMAGDASN-KKFLKTALR--GVRSIICPS 170 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~--~~~~~v~~v~~D~~d-~~~~~~~~~--~~d~Vi~~~ 170 (305)
.++++|||+||+|.||...++.+...|++|+++++++++... .++. -.++..+ .+ .+.+.+... ++|+||.+.
T Consensus 158 ~~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga-~~v~~~~-~~~~~~v~~~~~~~g~Dvvid~~ 235 (342)
T 4eye_A 158 RAGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKSVGA-DIVLPLE-EGWAKAVREATGGAGVDMVVDPI 235 (342)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTC-SEEEESS-TTHHHHHHHHTTTSCEEEEEESC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCC-cEEecCc-hhHHHHHHHHhCCCCceEEEECC
Confidence 356899999999999999999999999999999998776432 2332 1233333 33 244555544 589999885
Q ss_pred cch-Hhh---hhhhcCCCEEEEEccc
Q 021928 171 EGF-ISN---AGSLKGVQHVILLSQL 192 (305)
Q Consensus 171 ~g~-~~~---~a~~~gv~~~V~iSS~ 192 (305)
++. +.. ..+.. .++|.++..
T Consensus 236 g~~~~~~~~~~l~~~--G~iv~~G~~ 259 (342)
T 4eye_A 236 GGPAFDDAVRTLASE--GRLLVVGFA 259 (342)
T ss_dssp C--CHHHHHHTEEEE--EEEEEC---
T ss_pred chhHHHHHHHhhcCC--CEEEEEEcc
Confidence 543 222 22223 367776543
|
| >3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A* | Back alignment and structure |
|---|
Probab=96.89 E-value=0.0054 Score=55.06 Aligned_cols=89 Identities=13% Similarity=0.118 Sum_probs=62.3
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCc------------------chhh------hhcCC--CcEEeec
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDK------------------RNAM------ESFGT--YVESMAG 148 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~------------------~~~~------~~~~~--~v~~v~~ 148 (305)
....+|+|.|+ |++|+++++.|+..|. ++.+++++. .|.. ..+.+ .++.+..
T Consensus 34 L~~~~VlVvGa-GGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~iNP~v~v~~~~~ 112 (292)
T 3h8v_A 34 IRTFAVAIVGV-GGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNINPDVLFEVHNY 112 (292)
T ss_dssp GGGCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBC------------CCTTSBHHHHHHHHHHHHCTTSEEEEECC
T ss_pred HhCCeEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhhCCCcEEEEecc
Confidence 34589999998 9999999999999995 787777654 1211 11223 4556667
Q ss_pred CCCCHHHHHHHh-----------cCccEEEECCcch-----HhhhhhhcCCCE
Q 021928 149 DASNKKFLKTAL-----------RGVRSIICPSEGF-----ISNAGSLKGVQH 185 (305)
Q Consensus 149 D~~d~~~~~~~~-----------~~~d~Vi~~~~g~-----~~~~a~~~gv~~ 185 (305)
++++.+.+...+ +++|.||.+.+.+ +.+++.+.+++.
T Consensus 113 ~l~~~~~~~~~~~~~~~~~l~~~~~~DlVid~~Dn~~~R~~in~~c~~~~~Pl 165 (292)
T 3h8v_A 113 NITTVENFQHFMDRISNGGLEEGKPVDLVLSCVDNFEARMTINTACNELGQTW 165 (292)
T ss_dssp CTTSHHHHHHHHHHHHHBSSSTTBCCSEEEECCSSHHHHHHHHHHHHHHTCCE
T ss_pred cCCcHHHHHHHhhhhcccccccCCCCCEEEECCcchhhhhHHHHHHHHhCCCE
Confidence 777656666554 6899999886543 556677777754
|
| >1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A* | Back alignment and structure |
|---|
Probab=96.89 E-value=0.0017 Score=60.36 Aligned_cols=85 Identities=18% Similarity=0.122 Sum_probs=50.7
Q ss_pred CCEEEEEcCCChHHHHHHHHHH-hCCC---eEEEEEcC-cchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEECCcc
Q 021928 98 RDAVLVTDGDSDIGQMVILSLI-VKRT---RIKALVKD-KRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG 172 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~-~~g~---~V~~~~R~-~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~g 172 (305)
|++|.|.||+|.+|+.++++|+ +.++ .++.+..+ ..+....+.. .+....|..+.+. +.++|+||.+.+.
T Consensus 1 m~kVaIvGAtG~vG~~llr~ll~~~~~~~v~i~~~~~~s~G~~v~~~~g-~~i~~~~~~~~~~----~~~~DvVf~a~g~ 75 (367)
T 1t4b_A 1 MQNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQAAPSFGG-TTGTLQDAFDLEA----LKALDIIVTCQGG 75 (367)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTSBCCGGGT-CCCBCEETTCHHH----HHTCSEEEECSCH
T ss_pred CcEEEEECCCCHHHHHHHHHHHhcCCCCeEEEEEEEeCCCCCCccccCC-CceEEEecCChHH----hcCCCEEEECCCc
Confidence 4789999999999999999554 4543 45555443 2111111111 2333344555444 3599999999764
Q ss_pred h----HhhhhhhcCCCEEE
Q 021928 173 F----ISNAGSLKGVQHVI 187 (305)
Q Consensus 173 ~----~~~~a~~~gv~~~V 187 (305)
. ......+.|++++|
T Consensus 76 ~~s~~~a~~~~~~G~k~vV 94 (367)
T 1t4b_A 76 DYTNEIYPKLRESGWQGYW 94 (367)
T ss_dssp HHHHHHHHHHHHTTCCCEE
T ss_pred hhHHHHHHHHHHCCCCEEE
Confidence 3 34445667875433
|
| >1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A* | Back alignment and structure |
|---|
Probab=96.89 E-value=0.0003 Score=62.76 Aligned_cols=35 Identities=14% Similarity=0.277 Sum_probs=28.9
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHh-CCCeEEEEEcC
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIV-KRTRIKALVKD 131 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~-~g~~V~~~~R~ 131 (305)
++++|+|+|++|.+|+.+++.+.+ .+++++++.+.
T Consensus 4 ~~mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~ 39 (273)
T 1dih_A 4 ANIRVAIAGAGGRMGRQLIQAALALEGVQLGAALER 39 (273)
T ss_dssp CBEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECC
T ss_pred CCcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEec
Confidence 347999999999999999999884 57888866544
|
| >2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A* | Back alignment and structure |
|---|
Probab=96.87 E-value=0.0013 Score=60.20 Aligned_cols=90 Identities=16% Similarity=0.089 Sum_probs=59.4
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcchhhh--hcCCCcEEeecCCCC---HHHHHHHhc--CccEEEE
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAME--SFGTYVESMAGDASN---KKFLKTALR--GVRSIIC 168 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~--~~~~~v~~v~~D~~d---~~~~~~~~~--~~d~Vi~ 168 (305)
++++|||+|| |.+|...++.+...|+ +|++++|++++... .++ ... ..|..+ .+.+.++.. ++|+||.
T Consensus 167 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~G--a~~-~~~~~~~~~~~~v~~~~~g~g~D~vid 242 (348)
T 2d8a_A 167 SGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVG--ADY-VINPFEEDVVKEVMDITDGNGVDVFLE 242 (348)
T ss_dssp TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHHT--CSE-EECTTTSCHHHHHHHHTTTSCEEEEEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhC--CCE-EECCCCcCHHHHHHHHcCCCCCCEEEE
Confidence 5689999999 9999999999999999 99999998766332 233 221 134433 233444433 6899998
Q ss_pred CCcc--hHhh---hhhhcCCCEEEEEccc
Q 021928 169 PSEG--FISN---AGSLKGVQHVILLSQL 192 (305)
Q Consensus 169 ~~~g--~~~~---~a~~~gv~~~V~iSS~ 192 (305)
+.++ .+.. .++.. .++|.+++.
T Consensus 243 ~~g~~~~~~~~~~~l~~~--G~iv~~g~~ 269 (348)
T 2d8a_A 243 FSGAPKALEQGLQAVTPA--GRVSLLGLY 269 (348)
T ss_dssp CSCCHHHHHHHHHHEEEE--EEEEECCCC
T ss_pred CCCCHHHHHHHHHHHhcC--CEEEEEccC
Confidence 8553 2222 23333 378887754
|
| >4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A | Back alignment and structure |
|---|
Probab=96.87 E-value=0.0024 Score=60.18 Aligned_cols=71 Identities=10% Similarity=0.098 Sum_probs=57.4
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEEC
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 169 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~ 169 (305)
.++++|+|.|+ |.+|+.+++.+.+.|++|++++.++........+ +.+..|+.|.+.+.++.+++|+|+.-
T Consensus 33 ~~~~~IlIlG~-G~lg~~~~~aa~~lG~~v~v~d~~~~~p~~~~ad--~~~~~~~~d~~~l~~~a~~~D~V~~~ 103 (419)
T 4e4t_A 33 LPGAWLGMVGG-GQLGRMFCFAAQSMGYRVAVLDPDPASPAGAVAD--RHLRAAYDDEAALAELAGLCEAVSTE 103 (419)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCTTCHHHHHSS--EEECCCTTCHHHHHHHHHHCSEEEEC
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEECCCCcCchhhhCC--EEEECCcCCHHHHHHHHhcCCEEEEc
Confidence 35689999997 8999999999999999999998765443222332 56678999999999999999999854
|
| >2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=96.84 E-value=0.0022 Score=57.61 Aligned_cols=70 Identities=10% Similarity=0.025 Sum_probs=52.4
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEECCc
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE 171 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~ 171 (305)
..+++|+|.|+ |.+|+.+++.|...|++|++..|++++.......+++.+. .+++.++++++|+|+.+.+
T Consensus 155 l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~-----~~~l~~~l~~aDvVi~~~p 224 (300)
T 2rir_A 155 IHGSQVAVLGL-GRTGMTIARTFAALGANVKVGARSSAHLARITEMGLVPFH-----TDELKEHVKDIDICINTIP 224 (300)
T ss_dssp STTSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCEEEE-----GGGHHHHSTTCSEEEECCS
T ss_pred CCCCEEEEEcc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCeEEc-----hhhHHHHhhCCCEEEECCC
Confidence 45699999997 9999999999999999999999987654322111233322 2456778899999997744
|
| >3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis} | Back alignment and structure |
|---|
Probab=96.82 E-value=0.0025 Score=58.07 Aligned_cols=92 Identities=18% Similarity=0.207 Sum_probs=60.8
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh--hcCCCcEEeecCCCC---HHHHHHHhc--CccEEEE
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME--SFGTYVESMAGDASN---KKFLKTALR--GVRSIIC 168 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~--~~~~~v~~v~~D~~d---~~~~~~~~~--~~d~Vi~ 168 (305)
.++++|||+||+|.||...++.+...|++|+++++++++... .++.. .+ .|..+ .+.+.+... ++|+||.
T Consensus 143 ~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lga~-~~--~~~~~~~~~~~~~~~~~~~g~Dvvid 219 (340)
T 3gms_A 143 QRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLRLGAA-YV--IDTSTAPLYETVMELTNGIGADAAID 219 (340)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCS-EE--EETTTSCHHHHHHHHTTTSCEEEEEE
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhCCCc-EE--EeCCcccHHHHHHHHhCCCCCcEEEE
Confidence 356899999999999999999998999999999998876432 23321 12 24433 234444443 6899998
Q ss_pred CCcch-Hhh---hhhhcCCCEEEEEccc
Q 021928 169 PSEGF-ISN---AGSLKGVQHVILLSQL 192 (305)
Q Consensus 169 ~~~g~-~~~---~a~~~gv~~~V~iSS~ 192 (305)
+.++. ... ..+.. .++|.++..
T Consensus 220 ~~g~~~~~~~~~~l~~~--G~iv~~G~~ 245 (340)
T 3gms_A 220 SIGGPDGNELAFSLRPN--GHFLTIGLL 245 (340)
T ss_dssp SSCHHHHHHHHHTEEEE--EEEEECCCT
T ss_pred CCCChhHHHHHHHhcCC--CEEEEEeec
Confidence 86543 222 22222 478877654
|
| >2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6 | Back alignment and structure |
|---|
Probab=96.81 E-value=0.0026 Score=57.05 Aligned_cols=54 Identities=13% Similarity=0.204 Sum_probs=43.0
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEECC
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS 170 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~ 170 (305)
++++|.|.||.|.+|..+++.|.+.|++|+++.|+++. +..++++++|+||.+.
T Consensus 20 ~~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~~~--------------------~~~~~~~~aDvVilav 73 (298)
T 2pv7_A 20 DIHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWA--------------------VAESILANADVVIVSV 73 (298)
T ss_dssp TCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGG--------------------GHHHHHTTCSEEEECS
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCccc--------------------CHHHHhcCCCEEEEeC
Confidence 35689999988999999999999999999999887642 2334566777777663
|
| >3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens} | Back alignment and structure |
|---|
Probab=96.80 E-value=0.0017 Score=57.72 Aligned_cols=65 Identities=8% Similarity=-0.050 Sum_probs=49.2
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEECCc
Q 021928 99 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE 171 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~ 171 (305)
|+|.|.|+ |.+|..+++.|++.|++|++..|++++.......++... +++.++++++|+||.+.+
T Consensus 2 ~~i~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~-------~~~~~~~~~aDvvi~~vp 66 (287)
T 3pef_A 2 QKFGFIGL-GIMGSAMAKNLVKAGCSVTIWNRSPEKAEELAALGAERA-------ATPCEVVESCPVTFAMLA 66 (287)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEEC-------SSHHHHHHHCSEEEECCS
T ss_pred CEEEEEee-cHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeec-------CCHHHHHhcCCEEEEEcC
Confidence 78999996 999999999999999999999999877544332223221 234566677899888744
|
| >3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A* | Back alignment and structure |
|---|
Probab=96.78 E-value=0.0043 Score=58.10 Aligned_cols=69 Identities=12% Similarity=0.191 Sum_probs=55.9
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEE
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIIC 168 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~ 168 (305)
+++|+|.|+ |.+|+.+++.+.+.|++|++++ ++.............+.+|+.|.+.+.++.+.+|+|+.
T Consensus 24 ~~~I~ilGg-G~lg~~l~~aa~~lG~~v~~~d-~~~~p~~~~ad~~~~~~~~~~d~~~l~~~a~~~d~i~~ 92 (403)
T 3k5i_A 24 SRKVGVLGG-GQLGRMLVESANRLNIQVNVLD-ADNSPAKQISAHDGHVTGSFKEREAVRQLAKTCDVVTA 92 (403)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHTCEEEEEE-STTCTTGGGCCSSCCEESCTTCHHHHHHHHTTCSEEEE
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEE-CCCCcHHHhccccceeecCCCCHHHHHHHHHhCCEEEE
Confidence 589999997 8999999999999999999998 65433223333335678899999999999999998874
|
| >3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=96.78 E-value=0.0015 Score=58.91 Aligned_cols=67 Identities=7% Similarity=-0.001 Sum_probs=50.1
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEECCc
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE 171 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~ 171 (305)
.+|+|.|.|+ |.+|..+++.|++.|++|++..|++++.......++.+ . ++..++++++|+||.+.+
T Consensus 20 ~m~~I~iIG~-G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~----~---~~~~~~~~~aDvvi~~vp 86 (310)
T 3doj_A 20 HMMEVGFLGL-GIMGKAMSMNLLKNGFKVTVWNRTLSKCDELVEHGASV----C---ESPAEVIKKCKYTIAMLS 86 (310)
T ss_dssp CSCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEE----C---SSHHHHHHHCSEEEECCS
T ss_pred cCCEEEEECc-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCeE----c---CCHHHHHHhCCEEEEEcC
Confidence 4689999986 99999999999999999999999987755433222322 1 234556677898887743
|
| >3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=96.78 E-value=0.006 Score=55.70 Aligned_cols=92 Identities=14% Similarity=0.139 Sum_probs=60.3
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh--hcCCCcEEeecCCCC---HHHHHHHh--cCccEEEECCc
Q 021928 99 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME--SFGTYVESMAGDASN---KKFLKTAL--RGVRSIICPSE 171 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~--~~~~~v~~v~~D~~d---~~~~~~~~--~~~d~Vi~~~~ 171 (305)
++|+|+||+|.||...++.+...|.+|+++++++++... .++.. .+ .|..+ .+.+.+.. .++|+||.+.+
T Consensus 166 ~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~~Ga~-~~--~~~~~~~~~~~v~~~~~~~g~D~vid~~g 242 (349)
T 3pi7_A 166 KAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLKDIGAA-HV--LNEKAPDFEATLREVMKAEQPRIFLDAVT 242 (349)
T ss_dssp SEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHTCS-EE--EETTSTTHHHHHHHHHHHHCCCEEEESSC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCC-EE--EECCcHHHHHHHHHHhcCCCCcEEEECCC
Confidence 799999999999999999999999999999998876432 23321 22 23333 23344444 37999998865
Q ss_pred chHh-hhhhh-cCCCEEEEEcccc
Q 021928 172 GFIS-NAGSL-KGVQHVILLSQLS 193 (305)
Q Consensus 172 g~~~-~~a~~-~gv~~~V~iSS~~ 193 (305)
+... .+.+. ..-.++|.++...
T Consensus 243 ~~~~~~~~~~l~~~G~iv~~G~~~ 266 (349)
T 3pi7_A 243 GPLASAIFNAMPKRARWIIYGRLD 266 (349)
T ss_dssp HHHHHHHHHHSCTTCEEEECCCSC
T ss_pred ChhHHHHHhhhcCCCEEEEEeccC
Confidence 4322 22211 1234888887543
|
| >4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A | Back alignment and structure |
|---|
Probab=96.78 E-value=0.0051 Score=58.20 Aligned_cols=98 Identities=12% Similarity=0.066 Sum_probs=61.5
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh--hcCCCcEEe--ecCCCC----------------HHH
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME--SFGTYVESM--AGDASN----------------KKF 155 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~--~~~~~v~~v--~~D~~d----------------~~~ 155 (305)
.++++|||+||+|.||...++.+...|.+|+++++++++... .++....+- ..|+.+ .+.
T Consensus 219 ~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (447)
T 4a0s_A 219 KQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAVRALGCDLVINRAELGITDDIADDPRRVVETGRKLAKL 298 (447)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCCCEEEHHHHTCCTTGGGCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCCEEEecccccccccccccccccchhhhHHHHH
Confidence 356899999999999999999999999999999988766432 233211111 112211 233
Q ss_pred HHHHh-cCccEEEECCcchHhh-hhhh-cCCCEEEEEcccc
Q 021928 156 LKTAL-RGVRSIICPSEGFISN-AGSL-KGVQHVILLSQLS 193 (305)
Q Consensus 156 ~~~~~-~~~d~Vi~~~~g~~~~-~a~~-~gv~~~V~iSS~~ 193 (305)
+.+.. .++|+||.+.++.... +... ..-.++|.+++..
T Consensus 299 v~~~~g~g~Dvvid~~G~~~~~~~~~~l~~~G~iv~~G~~~ 339 (447)
T 4a0s_A 299 VVEKAGREPDIVFEHTGRVTFGLSVIVARRGGTVVTCGSSS 339 (447)
T ss_dssp HHHHHSSCCSEEEECSCHHHHHHHHHHSCTTCEEEESCCTT
T ss_pred HHHHhCCCceEEEECCCchHHHHHHHHHhcCCEEEEEecCC
Confidence 44443 3689999886653222 2111 1224888887553
|
| >3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=96.78 E-value=0.0027 Score=56.86 Aligned_cols=70 Identities=14% Similarity=0.035 Sum_probs=52.1
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEECCc
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE 171 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~ 171 (305)
..+++|+|.|+ |.||+.+++.|...|++|++..|++++.......+++++. .+++.++++++|+|+.+.+
T Consensus 153 l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~-----~~~l~~~l~~aDvVi~~~p 222 (293)
T 3d4o_A 153 IHGANVAVLGL-GRVGMSVARKFAALGAKVKVGARESDLLARIAEMGMEPFH-----ISKAAQELRDVDVCINTIP 222 (293)
T ss_dssp STTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTSEEEE-----GGGHHHHTTTCSEEEECCS
T ss_pred CCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHCCCeecC-----hhhHHHHhcCCCEEEECCC
Confidence 45699999996 9999999999999999999999987653222111234331 2456778899999997744
|
| >4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=96.77 E-value=0.0026 Score=57.68 Aligned_cols=67 Identities=9% Similarity=0.005 Sum_probs=51.3
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEECCc
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE 171 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~ 171 (305)
.+|+|.|.|+ |.+|..+++.|++.|++|++..|++++..+....++.+. .++.++++++|+||.+.+
T Consensus 30 ~~~~I~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~-------~~~~e~~~~aDvVi~~vp 96 (320)
T 4dll_A 30 YARKITFLGT-GSMGLPMARRLCEAGYALQVWNRTPARAASLAALGATIH-------EQARAAARDADIVVSMLE 96 (320)
T ss_dssp CCSEEEEECC-TTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCEEE-------SSHHHHHTTCSEEEECCS
T ss_pred CCCEEEEECc-cHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHCCCEee-------CCHHHHHhcCCEEEEECC
Confidence 4589999986 999999999999999999999999887554433333321 234567788899987744
|
| >3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A | Back alignment and structure |
|---|
Probab=96.76 E-value=0.0038 Score=57.24 Aligned_cols=89 Identities=13% Similarity=0.036 Sum_probs=54.5
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhC-CCeEEEEEcCc---c--h-hhhh---cCC--CcEEeecCCCCHHHHHHHhcCccE
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVK-RTRIKALVKDK---R--N-AMES---FGT--YVESMAGDASNKKFLKTALRGVRS 165 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~R~~---~--~-~~~~---~~~--~v~~v~~D~~d~~~~~~~~~~~d~ 165 (305)
|++|.|.||||.+|+.+++.|.+. .+++..+..+. . + ..+. +.. ...+... .+.+ +.++++|+
T Consensus 4 M~kv~IvGatG~vG~~l~~~L~~~p~~el~~l~s~~~~~saGk~~~~~~p~~~~~~~~~v~~~--~~~~---~~~~~~Dv 78 (337)
T 3dr3_A 4 MLNTLIVGASGYAGAELVTYVNRHPHMNITALTVSAQSNDAGKLISDLHPQLKGIVELPLQPM--SDIS---EFSPGVDV 78 (337)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTSBHHHHCGGGTTTCCCBEEEE--SSGG---GTCTTCSE
T ss_pred ceEEEEECCCChHHHHHHHHHHhCCCCcEEEEEecCchhhcCCchHHhCccccCccceeEecc--CCHH---HHhcCCCE
Confidence 579999999999999999999984 46888775433 1 1 1111 111 1222221 0211 23379999
Q ss_pred EEECCcch----HhhhhhhcCCCEEEEEccc
Q 021928 166 IICPSEGF----ISNAGSLKGVQHVILLSQL 192 (305)
Q Consensus 166 Vi~~~~g~----~~~~a~~~gv~~~V~iSS~ 192 (305)
||.+.+.. ....+.+.|+ ++|-.|+.
T Consensus 79 vf~a~p~~~s~~~~~~~~~~g~-~vIDlSa~ 108 (337)
T 3dr3_A 79 VFLATAHEVSHDLAPQFLEAGC-VVFDLSGA 108 (337)
T ss_dssp EEECSCHHHHHHHHHHHHHTTC-EEEECSST
T ss_pred EEECCChHHHHHHHHHHHHCCC-EEEEcCCc
Confidence 99986644 2333455676 56667765
|
| >3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A* | Back alignment and structure |
|---|
Probab=96.72 E-value=0.0021 Score=57.04 Aligned_cols=62 Identities=10% Similarity=0.018 Sum_probs=47.2
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEEC
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 169 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~ 169 (305)
.++++|+|+ |+.|+.++..|++.|.+|+++.|+++++.+...-+++.+ ++.+ +.++|.||++
T Consensus 118 ~k~vlvlGa-GGaaraia~~L~~~G~~v~V~nRt~~ka~~la~~~~~~~--~~~~-------l~~~DiVIna 179 (269)
T 3phh_A 118 YQNALILGA-GGSAKALACELKKQGLQVSVLNRSSRGLDFFQRLGCDCF--MEPP-------KSAFDLIINA 179 (269)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCTTHHHHHHHTCEEE--SSCC-------SSCCSEEEEC
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeEe--cHHH-------hccCCEEEEc
Confidence 689999997 999999999999999999999999887654431113333 3333 2278999987
|
| >3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=96.70 E-value=0.00061 Score=62.71 Aligned_cols=72 Identities=10% Similarity=-0.004 Sum_probs=49.1
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCC--CeEEEEEcCcchhhh----hcCCCcEEeecCCCCHHHHHHHhcCccEEEECC
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRNAME----SFGTYVESMAGDASNKKFLKTALRGVRSIICPS 170 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g--~~V~~~~R~~~~~~~----~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~ 170 (305)
++++|.|+||+|++|+.++..|+..| .+|++++.++++... ..... +-..++.-..+..++++++|+||+++
T Consensus 7 ~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~--~~~~~i~~t~d~~~al~dADvVvita 84 (343)
T 3fi9_A 7 TEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCG--FEGLNLTFTSDIKEALTDAKYIVSSG 84 (343)
T ss_dssp CSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHC--CTTCCCEEESCHHHHHTTEEEEEECC
T ss_pred CCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCc--CCCCceEEcCCHHHHhCCCCEEEEcc
Confidence 35899999999999999999999998 489999988765221 11000 00011111123567799999999884
|
| >1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8 | Back alignment and structure |
|---|
Probab=96.70 E-value=0.0025 Score=50.68 Aligned_cols=83 Identities=7% Similarity=0.127 Sum_probs=54.3
Q ss_pred CCCEEEEEcCC---ChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEECCcch
Q 021928 97 ARDAVLVTDGD---SDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEGF 173 (305)
Q Consensus 97 ~~~~vlVtGat---G~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~g~ 173 (305)
.+++|.|.|+| |.+|..+++.|.+.|++|+.+.++.+.. . ++.++ .++.++.+.+|.++.+.+..
T Consensus 13 ~p~~IavIGaS~~~g~~G~~~~~~L~~~G~~V~~vnp~~~~i---~--G~~~~-------~s~~el~~~vDlvii~vp~~ 80 (138)
T 1y81_A 13 EFRKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYDEI---E--GLKCY-------RSVRELPKDVDVIVFVVPPK 80 (138)
T ss_dssp -CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEE---T--TEECB-------SSGGGSCTTCCEEEECSCHH
T ss_pred CCCeEEEEeecCCCCCHHHHHHHHHHHCCCEEEEeCCCCCeE---C--Ceeec-------CCHHHhCCCCCEEEEEeCHH
Confidence 45899999997 8999999999999999977766553221 1 12211 22233445789999874422
Q ss_pred ----HhhhhhhcCCCEEEEEcc
Q 021928 174 ----ISNAGSLKGVQHVILLSQ 191 (305)
Q Consensus 174 ----~~~~a~~~gv~~~V~iSS 191 (305)
+.+.+.+.|++.++..++
T Consensus 81 ~v~~v~~~~~~~g~~~i~~~~~ 102 (138)
T 1y81_A 81 VGLQVAKEAVEAGFKKLWFQPG 102 (138)
T ss_dssp HHHHHHHHHHHTTCCEEEECTT
T ss_pred HHHHHHHHHHHcCCCEEEEcCc
Confidence 233344578888776653
|
| >4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A* | Back alignment and structure |
|---|
Probab=96.69 E-value=0.0048 Score=60.25 Aligned_cols=85 Identities=13% Similarity=0.139 Sum_probs=66.8
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHH-HhcCccEEEECCcch----
Q 021928 99 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKT-ALRGVRSIICPSEGF---- 173 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~-~~~~~d~Vi~~~~g~---- 173 (305)
++|+|.|+ |.+|++++++|.+.|++|+++.++++...+. ..++.+|.+|.+.+++ -++.+|++|.+.+..
T Consensus 349 ~~viIiG~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~~----~~~i~gD~t~~~~L~~agi~~ad~vi~~~~~d~~ni 423 (565)
T 4gx0_A 349 ELIFIIGH-GRIGCAAAAFLDRKPVPFILIDRQESPVCND----HVVVYGDATVGQTLRQAGIDRASGIIVTTNDDSTNI 423 (565)
T ss_dssp CCEEEECC-SHHHHHHHHHHHHTTCCEEEEESSCCSSCCS----SCEEESCSSSSTHHHHHTTTSCSEEEECCSCHHHHH
T ss_pred CCEEEECC-CHHHHHHHHHHHHCCCCEEEEECChHHHhhc----CCEEEeCCCCHHHHHhcCccccCEEEEECCCchHHH
Confidence 89999998 9999999999999999999999998765432 2789999999888876 456789999885532
Q ss_pred -HhhhhhhcCCC-EEEE
Q 021928 174 -ISNAGSLKGVQ-HVIL 188 (305)
Q Consensus 174 -~~~~a~~~gv~-~~V~ 188 (305)
....+++.+.+ ++|-
T Consensus 424 ~~~~~ak~l~~~~~iia 440 (565)
T 4gx0_A 424 FLTLACRHLHSHIRIVA 440 (565)
T ss_dssp HHHHHHHHHCSSSEEEE
T ss_pred HHHHHHHHHCCCCEEEE
Confidence 23345666665 5543
|
| >1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A | Back alignment and structure |
|---|
Probab=96.67 E-value=0.014 Score=51.15 Aligned_cols=93 Identities=14% Similarity=0.136 Sum_probs=61.1
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCc-------------------chhh------hhcCCC--cEEeec
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDK-------------------RNAM------ESFGTY--VESMAG 148 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~-------------------~~~~------~~~~~~--v~~v~~ 148 (305)
..++|+|.|+ |++|+++++.|+..|. ++.+++++. .+.. ....+. ++.+..
T Consensus 27 ~~~~VlvvG~-GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~ 105 (251)
T 1zud_1 27 LDSQVLIIGL-GGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTALQQ 105 (251)
T ss_dssp HTCEEEEECC-STTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECS
T ss_pred hcCcEEEEcc-CHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCCCEEEEEec
Confidence 3589999998 7799999999999997 677765542 1111 011233 344444
Q ss_pred CCCCHHHHHHHhcCccEEEECCcch-----HhhhhhhcCCCEEEEEccc
Q 021928 149 DASNKKFLKTALRGVRSIICPSEGF-----ISNAGSLKGVQHVILLSQL 192 (305)
Q Consensus 149 D~~d~~~~~~~~~~~d~Vi~~~~g~-----~~~~a~~~gv~~~V~iSS~ 192 (305)
++. .+.+.+.++++|+||.+.+.. +.+++.+.+++ +|..+..
T Consensus 106 ~~~-~~~~~~~~~~~DvVi~~~d~~~~r~~l~~~~~~~~~p-~i~~~~~ 152 (251)
T 1zud_1 106 RLT-GEALKDAVARADVVLDCTDNMATRQEINAACVALNTP-LITASAV 152 (251)
T ss_dssp CCC-HHHHHHHHHHCSEEEECCSSHHHHHHHHHHHHHTTCC-EEEEEEE
T ss_pred cCC-HHHHHHHHhcCCEEEECCCCHHHHHHHHHHHHHhCCC-EEEEecc
Confidence 453 467788889999999885432 45566677765 5555443
|
| >2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=96.64 E-value=0.0038 Score=57.47 Aligned_cols=89 Identities=10% Similarity=0.019 Sum_probs=54.2
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCC-CeEEEEEcCcc---h-hhhhcCC---------CcEEeecCCCCHHHHHHHhcCc
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKR---N-AMESFGT---------YVESMAGDASNKKFLKTALRGV 163 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~R~~~---~-~~~~~~~---------~v~~v~~D~~d~~~~~~~~~~~ 163 (305)
+++|.|.||+|.+|+.+++.|.+.. .+|+++..+.. + ..+.++. ..+....|+ |.+ .+.++
T Consensus 4 ~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-d~~----~~~~v 78 (350)
T 2ep5_A 4 KIKVSLLGSTGMVGQKMVKMLAKHPYLELVKVSASPSKIGKKYKDAVKWIEQGDIPEEVQDLPIVST-NYE----DHKDV 78 (350)
T ss_dssp CEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEECCGGGTTSBHHHHCCCCSSSSCCHHHHTCBEECS-SGG----GGTTC
T ss_pred CcEEEEECcCCHHHHHHHHHHHhCCCcEEEEEecChhhcCCCHHHhcCcccccccccCCceeEEeeC-CHH----HhcCC
Confidence 4799999999999999999998765 48888862211 1 1111111 011111222 222 24789
Q ss_pred cEEEECCcch----HhhhhhhcCCCEEEEEccc
Q 021928 164 RSIICPSEGF----ISNAGSLKGVQHVILLSQL 192 (305)
Q Consensus 164 d~Vi~~~~g~----~~~~a~~~gv~~~V~iSS~ 192 (305)
|+||.+++.. ....+.+.|++ +|-.|+.
T Consensus 79 DvVf~atp~~~s~~~a~~~~~aG~~-VId~s~~ 110 (350)
T 2ep5_A 79 DVVLSALPNELAESIELELVKNGKI-VVSNASP 110 (350)
T ss_dssp SEEEECCCHHHHHHHHHHHHHTTCE-EEECSST
T ss_pred CEEEECCChHHHHHHHHHHHHCCCE-EEECCcc
Confidence 9999987643 34445667775 6666654
|
| >3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=96.62 E-value=0.0089 Score=55.14 Aligned_cols=69 Identities=12% Similarity=0.167 Sum_probs=54.7
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEEC
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 169 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~ 169 (305)
|++|+|+|+ |.+|+.+++.+.+.|++|+++..++......... ..+..|+.|.+.+.++.+++|.|+..
T Consensus 1 M~~Ililg~-g~~g~~~~~a~~~~G~~v~~~~~~~~~~~~~~~~--~~~~~~~~d~~~l~~~~~~~d~v~~~ 69 (380)
T 3ax6_A 1 MKKIGIIGG-GQLGKMMTLEAKKMGFYVIVLDPTPRSPAGQVAD--EQIVAGFFDSERIEDLVKGSDVTTYD 69 (380)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSTTCTTGGGSS--EEEECCTTCHHHHHHHHHTCSEEEES
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhCc--eEEECCCCCHHHHHHHHhcCCEEEec
Confidence 478999997 8999999999999999999988765432212222 45678999999998888999998865
|
| >3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A* | Back alignment and structure |
|---|
Probab=96.61 E-value=0.0087 Score=55.53 Aligned_cols=70 Identities=11% Similarity=0.130 Sum_probs=55.6
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEEC
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 169 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~ 169 (305)
++++|+|.|+ |.+|+.+++.+.+.|++|++++.++........ -..+..|+.|.+.+.++++.+|+|..-
T Consensus 13 ~~k~IlIlG~-G~~g~~la~aa~~~G~~vi~~d~~~~~~~~~~a--d~~~~~~~~d~~~l~~~~~~~dvI~~~ 82 (389)
T 3q2o_A 13 PGKTIGIIGG-GQLGRMMALAAKEMGYKIAVLDPTKNSPCAQVA--DIEIVASYDDLKAIQHLAEISDVVTYE 82 (389)
T ss_dssp TTSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSTTCTTTTTC--SEEEECCTTCHHHHHHHHHTCSEEEES
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCCCCchHHhC--CceEecCcCCHHHHHHHHHhCCEeeec
Confidence 5689999997 889999999999999999999876543221222 245668999999999999999988654
|
| >3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str} | Back alignment and structure |
|---|
Probab=96.61 E-value=0.0032 Score=58.56 Aligned_cols=72 Identities=10% Similarity=0.001 Sum_probs=54.2
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCC------------------CCHHHHHH
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDA------------------SNKKFLKT 158 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~------------------~d~~~~~~ 158 (305)
++.+|+|+|+ |-+|...++.+...|.+|++++|++.+......-+.+++..|+ .+.+.+.+
T Consensus 183 ~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~lGa~~~~l~~~~~~~~gya~~~~~~~~~~~~~~l~e 261 (381)
T 3p2y_A 183 KPASALVLGV-GVAGLQALATAKRLGAKTTGYDVRPEVAEQVRSVGAQWLDLGIDAAGEGGYARELSEAERAQQQQALED 261 (381)
T ss_dssp CCCEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHHTTCEECCCC-------------CHHHHHHHHHHHHH
T ss_pred CCCEEEEECc-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEeccccccccccchhhhhHHHHhhhHHHHHH
Confidence 5689999998 9999999999999999999999998764332222345444321 12356788
Q ss_pred HhcCccEEEEC
Q 021928 159 ALRGVRSIICP 169 (305)
Q Consensus 159 ~~~~~d~Vi~~ 169 (305)
+++++|+||.+
T Consensus 262 ~l~~aDIVI~t 272 (381)
T 3p2y_A 262 AITKFDIVITT 272 (381)
T ss_dssp HHTTCSEEEEC
T ss_pred HHhcCCEEEEC
Confidence 99999999976
|
| >3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans} | Back alignment and structure |
|---|
Probab=96.61 E-value=0.0052 Score=56.10 Aligned_cols=93 Identities=15% Similarity=0.217 Sum_probs=58.5
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh--hcCCCcEEeecCCCC-HHHHHHHhc--CccEEEECC
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME--SFGTYVESMAGDASN-KKFLKTALR--GVRSIICPS 170 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~--~~~~~v~~v~~D~~d-~~~~~~~~~--~~d~Vi~~~ 170 (305)
.++++|||+||+|.||...++.+...|.+|+++ +++++... .++ ...+. +-.+ .+.+.+... ++|+||.+.
T Consensus 149 ~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~~~lG--a~~i~-~~~~~~~~~~~~~~~~g~D~vid~~ 224 (343)
T 3gaz_A 149 QDGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEYVRDLG--ATPID-ASREPEDYAAEHTAGQGFDLVYDTL 224 (343)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHHHHHHT--SEEEE-TTSCHHHHHHHHHTTSCEEEEEESS
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHHHHHcC--CCEec-cCCCHHHHHHHHhcCCCceEEEECC
Confidence 356899999999999999999999999999998 76655322 233 33322 2222 233444443 689999885
Q ss_pred cchHh-hhhhh-cCCCEEEEEccc
Q 021928 171 EGFIS-NAGSL-KGVQHVILLSQL 192 (305)
Q Consensus 171 ~g~~~-~~a~~-~gv~~~V~iSS~ 192 (305)
++... .+.+. ..-.++|.++..
T Consensus 225 g~~~~~~~~~~l~~~G~iv~~g~~ 248 (343)
T 3gaz_A 225 GGPVLDASFSAVKRFGHVVSCLGW 248 (343)
T ss_dssp CTHHHHHHHHHEEEEEEEEESCCC
T ss_pred CcHHHHHHHHHHhcCCeEEEEccc
Confidence 54322 22211 112467776544
|
| >3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=96.60 E-value=0.0046 Score=55.35 Aligned_cols=65 Identities=5% Similarity=-0.157 Sum_probs=48.8
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEECCc
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE 171 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~ 171 (305)
.++|.|.|. |.+|..+++.|++.|++|++.+|++++.......++.+ . +++.++++ +|+||.+.+
T Consensus 15 ~~~I~vIG~-G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~----~---~~~~~~~~-aDvvi~~vp 79 (296)
T 3qha_A 15 QLKLGYIGL-GNMGAPMATRMTEWPGGVTVYDIRIEAMTPLAEAGATL----A---DSVADVAA-ADLIHITVL 79 (296)
T ss_dssp CCCEEEECC-STTHHHHHHHHTTSTTCEEEECSSTTTSHHHHHTTCEE----C---SSHHHHTT-SSEEEECCS
T ss_pred CCeEEEECc-CHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCEE----c---CCHHHHHh-CCEEEEECC
Confidence 468999995 99999999999999999999999987754433223332 1 23456677 899998744
|
| >3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=96.57 E-value=0.004 Score=55.83 Aligned_cols=68 Identities=7% Similarity=-0.087 Sum_probs=48.8
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEECCc
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE 171 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~ 171 (305)
++|+|.|.|+ |.+|..+++.|++.|++|++..|++++.......+......| +.++++++|+||.+.+
T Consensus 6 ~~~~I~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~------~~e~~~~aDvvi~~vp 73 (303)
T 3g0o_A 6 TDFHVGIVGL-GSMGMGAARSCLRAGLSTWGADLNPQACANLLAEGACGAAAS------AREFAGVVDALVILVV 73 (303)
T ss_dssp -CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSEEESS------STTTTTTCSEEEECCS
T ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCCccccCC------HHHHHhcCCEEEEECC
Confidence 4589999985 999999999999999999999999877544322222221222 2345677888887744
|
| >3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=96.56 E-value=0.0022 Score=57.08 Aligned_cols=68 Identities=9% Similarity=0.108 Sum_probs=48.6
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcchhhhh---cCC-CcEEeecCCCCHHHHHHHhcCccEEEECC
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMES---FGT-YVESMAGDASNKKFLKTALRGVRSIICPS 170 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~---~~~-~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~ 170 (305)
...++++|+|+ |++|+.++..|++.|. +|+++.|+++++.+. +.. .+..+ ++.+ +.. .++|.||+++
T Consensus 118 l~~k~~lvlGa-Gg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~--~~~~---l~~--~~~DivInaT 189 (272)
T 3pwz_A 118 LRNRRVLLLGA-GGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDHSRLRIS--RYEA---LEG--QSFDIVVNAT 189 (272)
T ss_dssp CTTSEEEEECC-SHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCCTTEEEE--CSGG---GTT--CCCSEEEECS
T ss_pred ccCCEEEEECc-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhccCCeeEe--eHHH---hcc--cCCCEEEECC
Confidence 35699999998 8999999999999996 999999998775432 221 13332 3322 111 6889999884
Q ss_pred c
Q 021928 171 E 171 (305)
Q Consensus 171 ~ 171 (305)
+
T Consensus 190 p 190 (272)
T 3pwz_A 190 S 190 (272)
T ss_dssp S
T ss_pred C
Confidence 3
|
| >3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=96.56 E-value=0.0025 Score=60.72 Aligned_cols=71 Identities=10% Similarity=0.060 Sum_probs=49.0
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEe-------------ecCCCCHHHHHHHhcCcc
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESM-------------AGDASNKKFLKTALRGVR 164 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v-------------~~D~~d~~~~~~~~~~~d 164 (305)
.|+|.|.|+ |.+|..++..|++.|++|++++|++++..........+. .+.+.-..++.++++++|
T Consensus 2 ~mkI~VIG~-G~vG~~lA~~La~~G~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~l~~~~~~~~l~~t~d~~ea~~~aD 80 (450)
T 3gg2_A 2 SLDIAVVGI-GYVGLVSATCFAELGANVRCIDTDRNKIEQLNSGTIPIYEPGLEKMIARNVKAGRLRFGTEIEQAVPEAD 80 (450)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTCSCCCSTTHHHHHHHHHHTTSEEEESCHHHHGGGCS
T ss_pred CCEEEEECc-CHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHcCCCcccCCCHHHHHHhhcccCcEEEECCHHHHHhcCC
Confidence 379999996 999999999999999999999999876433211100000 011111123456788999
Q ss_pred EEEEC
Q 021928 165 SIICP 169 (305)
Q Consensus 165 ~Vi~~ 169 (305)
+||.+
T Consensus 81 vViia 85 (450)
T 3gg2_A 81 IIFIA 85 (450)
T ss_dssp EEEEC
T ss_pred EEEEE
Confidence 99987
|
| >4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A* | Back alignment and structure |
|---|
Probab=96.55 E-value=0.005 Score=60.12 Aligned_cols=73 Identities=16% Similarity=0.206 Sum_probs=62.1
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCC-CcEEeecCCCCHHHHHHH-hcCccEEEEC
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGT-YVESMAGDASNKKFLKTA-LRGVRSIICP 169 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~-~v~~v~~D~~d~~~~~~~-~~~~d~Vi~~ 169 (305)
...++|+|.|+ |-+|+.++++|.+.|++|+++..+++...+.... ++.++.+|.++.+.++++ ++.+++++.+
T Consensus 125 ~~~~hviI~G~-g~~g~~la~~L~~~~~~vvvid~~~~~~~~~~~~~~~~~i~Gd~~~~~~L~~a~i~~a~~vi~t 199 (565)
T 4gx0_A 125 DTRGHILIFGI-DPITRTLIRKLESRNHLFVVVTDNYDQALHLEEQEGFKVVYGSPTDAHVLAGLRVAAARSIIAN 199 (565)
T ss_dssp TCCSCEEEESC-CHHHHHHHHHTTTTTCCEEEEESCHHHHHHHHHSCSSEEEESCTTCHHHHHHTTGGGCSEEEEC
T ss_pred ccCCeEEEECC-ChHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhcCCeEEEeCCCCHHHHHhcCcccCCEEEEe
Confidence 34589999997 8999999999999999999999998775554444 789999999999988875 5678998875
|
| >1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=96.55 E-value=0.0047 Score=57.10 Aligned_cols=91 Identities=12% Similarity=0.119 Sum_probs=61.4
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh--hcCCCcEEeecCCCCHHHHHHHhcCccEEEECCcc-
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME--SFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG- 172 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~--~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~g- 172 (305)
.++.+|||+|+ |.+|...++.+...|.+|+++++++++... .++. .. ..|..+.+.+.+...++|+||.+.++
T Consensus 193 ~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~~lGa--~~-vi~~~~~~~~~~~~~g~Dvvid~~g~~ 268 (369)
T 1uuf_A 193 GPGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKALGA--DE-VVNSRNADEMAAHLKSFDFILNTVAAP 268 (369)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTC--SE-EEETTCHHHHHTTTTCEEEEEECCSSC
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCC--cE-EeccccHHHHHHhhcCCCEEEECCCCH
Confidence 35689999998 899999999888899999999988776432 2332 21 24566655555555789999988443
Q ss_pred -hHhh---hhhhcCCCEEEEEccc
Q 021928 173 -FISN---AGSLKGVQHVILLSQL 192 (305)
Q Consensus 173 -~~~~---~a~~~gv~~~V~iSS~ 192 (305)
.+.. .++.. .++|.++..
T Consensus 269 ~~~~~~~~~l~~~--G~iv~~G~~ 290 (369)
T 1uuf_A 269 HNLDDFTTLLKRD--GTMTLVGAP 290 (369)
T ss_dssp CCHHHHHTTEEEE--EEEEECCCC
T ss_pred HHHHHHHHHhccC--CEEEEeccC
Confidence 2322 22333 377776643
|
| >1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6 | Back alignment and structure |
|---|
Probab=96.53 E-value=0.0019 Score=57.52 Aligned_cols=66 Identities=14% Similarity=0.033 Sum_probs=47.6
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEECCc
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE 171 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~ 171 (305)
+|+|.|.|+ |.+|..+++.|.+.|++|.+.+|++++.......++.. ..+ +.++++++|+||.+.+
T Consensus 5 ~m~i~iiG~-G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~----~~~---~~~~~~~~D~vi~~v~ 70 (299)
T 1vpd_A 5 TMKVGFIGL-GIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAET----AST---AKAIAEQCDVIITMLP 70 (299)
T ss_dssp -CEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEE----CSS---HHHHHHHCSEEEECCS
T ss_pred cceEEEECc-hHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCCCee----cCC---HHHHHhCCCEEEEECC
Confidence 479999995 99999999999999999999999877644322222322 122 3445667899998854
|
| >2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.53 E-value=0.02 Score=52.80 Aligned_cols=92 Identities=12% Similarity=0.093 Sum_probs=57.1
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhh--hhcCCCcEEeecCCCCHHHHHHH--hcCccEEEECCc
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM--ESFGTYVESMAGDASNKKFLKTA--LRGVRSIICPSE 171 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~--~~~~~~v~~v~~D~~d~~~~~~~--~~~~d~Vi~~~~ 171 (305)
.++++|+|+||+|.||...++.+...|.+|+++++ +++.. ..++ ... ..|..+.+..+++ ..++|+||.+.+
T Consensus 182 ~~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~~-~~~~~~~~~lG--a~~-v~~~~~~~~~~~~~~~~g~D~vid~~g 257 (375)
T 2vn8_A 182 CTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVCS-QDASELVRKLG--ADD-VIDYKSGSVEEQLKSLKPFDFILDNVG 257 (375)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC-GGGHHHHHHTT--CSE-EEETTSSCHHHHHHTSCCBSEEEESSC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEeC-hHHHHHHHHcC--CCE-EEECCchHHHHHHhhcCCCCEEEECCC
Confidence 35689999999999999999999899999998884 44322 2233 221 1244432222222 257999998855
Q ss_pred ch-H--hhhhhh-cCCCEEEEEcc
Q 021928 172 GF-I--SNAGSL-KGVQHVILLSQ 191 (305)
Q Consensus 172 g~-~--~~~a~~-~gv~~~V~iSS 191 (305)
+. . ..+.+. ..-.++|.++.
T Consensus 258 ~~~~~~~~~~~~l~~~G~iv~~g~ 281 (375)
T 2vn8_A 258 GSTETWAPDFLKKWSGATYVTLVT 281 (375)
T ss_dssp TTHHHHGGGGBCSSSCCEEEESCC
T ss_pred ChhhhhHHHHHhhcCCcEEEEeCC
Confidence 43 2 233221 22347887764
|
| >2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A* | Back alignment and structure |
|---|
Probab=96.52 E-value=0.0054 Score=56.30 Aligned_cols=90 Identities=10% Similarity=0.077 Sum_probs=62.1
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh---hcCCCcEEeecCCCCHHHHHHHhcCccEEEECCcc-
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG- 172 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~---~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~g- 172 (305)
++.+|||+|+ |.+|...++.+...|.+|+++++++++... .++. .. ..|..+.+.+.++..++|+||.+.++
T Consensus 180 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~lGa--~~-vi~~~~~~~~~~~~~g~D~vid~~g~~ 255 (357)
T 2cf5_A 180 PGLRGGILGL-GGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDLGA--DD-YVIGSDQAKMSELADSLDYVIDTVPVH 255 (357)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTTSCC--SC-EEETTCHHHHHHSTTTEEEEEECCCSC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHcCC--ce-eeccccHHHHHHhcCCCCEEEECCCCh
Confidence 5689999996 999999999888899999999998776432 3332 21 23555666677766789999987442
Q ss_pred -hHhh---hhhhcCCCEEEEEccc
Q 021928 173 -FISN---AGSLKGVQHVILLSQL 192 (305)
Q Consensus 173 -~~~~---~a~~~gv~~~V~iSS~ 192 (305)
.+.. ..+.. .++|.++..
T Consensus 256 ~~~~~~~~~l~~~--G~iv~~G~~ 277 (357)
T 2cf5_A 256 HALEPYLSLLKLD--GKLILMGVI 277 (357)
T ss_dssp CCSHHHHTTEEEE--EEEEECSCC
T ss_pred HHHHHHHHHhccC--CEEEEeCCC
Confidence 2222 22333 378777653
|
| >3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens} | Back alignment and structure |
|---|
Probab=96.52 E-value=0.0015 Score=58.20 Aligned_cols=66 Identities=6% Similarity=-0.085 Sum_probs=48.6
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEECCc
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE 171 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~ 171 (305)
|++|.|.|. |.+|..+++.|++.|++|++..|++++.......++.+ . ++..++++++|+||.+.+
T Consensus 1 M~~I~iiG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~----~---~~~~~~~~~advvi~~v~ 66 (287)
T 3pdu_A 1 MTTYGFLGL-GIMGGPMAANLVRAGFDVTVWNRNPAKCAPLVALGARQ----A---SSPAEVCAACDITIAMLA 66 (287)
T ss_dssp CCCEEEECC-STTHHHHHHHHHHHTCCEEEECSSGGGGHHHHHHTCEE----C---SCHHHHHHHCSEEEECCS
T ss_pred CCeEEEEcc-CHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCee----c---CCHHHHHHcCCEEEEEcC
Confidence 468999985 99999999999999999999999987754432222222 1 234556677899987743
|
| >2yv3_A Aspartate-semialdehyde dehydrogenase; aspartate pathway, structural genomics; 2.70A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=96.52 E-value=0.0029 Score=57.84 Aligned_cols=85 Identities=16% Similarity=0.111 Sum_probs=50.0
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCCeEEEEE--cCcchhhhh--cC-CCcEEeecCCCCHHHHHHHhcCccEEEECCcch
Q 021928 99 DAVLVTDGDSDIGQMVILSLIVKRTRIKALV--KDKRNAMES--FG-TYVESMAGDASNKKFLKTALRGVRSIICPSEGF 173 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~--R~~~~~~~~--~~-~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~g~ 173 (305)
++|.|.||+|.+|+.+++.|.++++.+..+. .+.+..... +. ..+.+...| .+ . + ++|+||.+.+..
T Consensus 1 mkVaI~GAtG~iG~~llr~L~~~~~~~~~l~~~~s~~~~g~~l~~~g~~i~v~~~~---~~---~-~-~~DvV~~a~g~~ 72 (331)
T 2yv3_A 1 MRVAVVGATGAVGREILKVLEARNFPLSELRLYASPRSAGVRLAFRGEEIPVEPLP---EG---P-L-PVDLVLASAGGG 72 (331)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCCCSCCEEEECGGGSSCEEEETTEEEEEEECC---SS---C-C-CCSEEEECSHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEeeccccCCCEEEEcCceEEEEeCC---hh---h-c-CCCEEEECCCcc
Confidence 5799999999999999999998776544322 111111000 11 122222222 22 2 4 899999987643
Q ss_pred ----HhhhhhhcCCCEEEEEccc
Q 021928 174 ----ISNAGSLKGVQHVILLSQL 192 (305)
Q Consensus 174 ----~~~~a~~~gv~~~V~iSS~ 192 (305)
......+.|+ ++|-.|+.
T Consensus 73 ~s~~~a~~~~~~G~-~vId~s~~ 94 (331)
T 2yv3_A 73 ISRAKALVWAEGGA-LVVDNSSA 94 (331)
T ss_dssp HHHHHHHHHHHTTC-EEEECSSS
T ss_pred chHHHHHHHHHCCC-EEEECCCc
Confidence 2333455676 56667765
|
| >1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5 | Back alignment and structure |
|---|
Probab=96.51 E-value=0.0018 Score=57.77 Aligned_cols=71 Identities=15% Similarity=0.097 Sum_probs=48.6
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhc---CCC---cEEeecCCCCHHHHHHHhcCccEEEEC
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF---GTY---VESMAGDASNKKFLKTALRGVRSIICP 169 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~---~~~---v~~v~~D~~d~~~~~~~~~~~d~Vi~~ 169 (305)
..+++++|+||+ ++|++++++|++.| +|+++.|+.++..+.. ... ...+.+|+.+ +.+.+.++|+||++
T Consensus 126 l~~k~vlV~GaG-giG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~~~~~~~~~d~~~---~~~~~~~~DilVn~ 200 (287)
T 1nvt_A 126 VKDKNIVIYGAG-GAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFSG---LDVDLDGVDIIINA 200 (287)
T ss_dssp CCSCEEEEECCS-HHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEEC---TTCCCTTCCEEEEC
T ss_pred cCCCEEEEECch-HHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhcccccceeEEEee---HHHhhCCCCEEEEC
Confidence 346899999985 99999999999999 9999999876543221 100 0011233333 14556789999988
Q ss_pred Cc
Q 021928 170 SE 171 (305)
Q Consensus 170 ~~ 171 (305)
++
T Consensus 201 ag 202 (287)
T 1nvt_A 201 TP 202 (287)
T ss_dssp SC
T ss_pred CC
Confidence 44
|
| >3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri} | Back alignment and structure |
|---|
Probab=96.49 E-value=0.0031 Score=56.22 Aligned_cols=66 Identities=9% Similarity=0.044 Sum_probs=48.1
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEECCc
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE 171 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~ 171 (305)
+++|.|.|+ |.+|..+++.|.+.|++|++..|++++.......++.. ..+ ..++++++|+||.+.+
T Consensus 4 ~~~i~iiG~-G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~----~~~---~~~~~~~~D~vi~~vp 69 (301)
T 3cky_A 4 SIKIGFIGL-GAMGKPMAINLLKEGVTVYAFDLMEANVAAVVAQGAQA----CEN---NQKVAAASDIIFTSLP 69 (301)
T ss_dssp CCEEEEECC-CTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHTTTCEE----CSS---HHHHHHHCSEEEECCS
T ss_pred CCEEEEECc-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCee----cCC---HHHHHhCCCEEEEECC
Confidence 478999995 99999999999999999999999887654333223332 122 3445667898888753
|
| >1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1 | Back alignment and structure |
|---|
Probab=96.48 E-value=0.0032 Score=59.14 Aligned_cols=68 Identities=19% Similarity=0.257 Sum_probs=51.3
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcchhhh---hcCCCcEEeecCCCCHHHHHHHhcCccEEEECCc
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALRGVRSIICPSE 171 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~---~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~ 171 (305)
..+++|+|+|+ |.+|+.+++.|...|. +|+++.|++++..+ .++ .+++ ++ +++.+.+.++|+||.+++
T Consensus 165 l~g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~g--~~~~--~~---~~l~~~l~~aDvVi~at~ 236 (404)
T 1gpj_A 165 LHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLG--GEAV--RF---DELVDHLARSDVVVSATA 236 (404)
T ss_dssp CTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHT--CEEC--CG---GGHHHHHHTCSEEEECCS
T ss_pred ccCCEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcC--Ccee--cH---HhHHHHhcCCCEEEEccC
Confidence 35699999998 9999999999999998 89999999866422 233 2322 22 345667789999998743
|
| >1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A* | Back alignment and structure |
|---|
Probab=96.47 E-value=0.0076 Score=56.10 Aligned_cols=73 Identities=12% Similarity=-0.055 Sum_probs=51.4
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCC----------------------CHH
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDAS----------------------NKK 154 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~----------------------d~~ 154 (305)
++++|+|+|+ |.+|..+++.+...|.+|+++.|++.+......-+.+++..|.. +.+
T Consensus 171 ~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~~~~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 249 (384)
T 1l7d_A 171 PPARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAE 249 (384)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHHTTCEECCC-----------------------CCHHH
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEeecccccccccccccchhhcCHHHHhhhHH
Confidence 5799999996 99999999999999999999999876533221112333312221 123
Q ss_pred HHHHHhcCccEEEECC
Q 021928 155 FLKTALRGVRSIICPS 170 (305)
Q Consensus 155 ~~~~~~~~~d~Vi~~~ 170 (305)
.+.+.+.++|+||++.
T Consensus 250 ~l~~~~~~aDvVi~~~ 265 (384)
T 1l7d_A 250 AVLKELVKTDIAITTA 265 (384)
T ss_dssp HHHHHHTTCSEEEECC
T ss_pred HHHHHhCCCCEEEECC
Confidence 4778888999999874
|
| >4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A* | Back alignment and structure |
|---|
Probab=96.47 E-value=0.013 Score=53.76 Aligned_cols=70 Identities=10% Similarity=0.080 Sum_probs=53.8
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCC-CCHHHHHHHhcCccEEEECC
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDA-SNKKFLKTALRGVRSIICPS 170 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~-~d~~~~~~~~~~~d~Vi~~~ 170 (305)
||+|+|+|| |..|..+++.+.+.|++|++++.++......+.+ +++..|. .|.+.+....+++|+|+...
T Consensus 1 MK~I~ilGg-g~~g~~~~~~Ak~~G~~vv~vd~~~~~~~~~~aD--~~~~~~~~~d~~~~~~~~~~~D~v~~~~ 71 (363)
T 4ffl_A 1 MKTICLVGG-KLQGFEAAYLSKKAGMKVVLVDKNPQALIRNYAD--EFYCFDVIKEPEKLLELSKRVDAVLPVN 71 (363)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCTTCTTTTTSS--EEEECCTTTCHHHHHHHHTSSSEEEECC
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCChhHhhCC--EEEECCCCcCHHHHHHHhcCCCEEEECC
Confidence 689999996 8999999999999999999998877543322322 4455554 46777778888999988653
|
| >2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A* | Back alignment and structure |
|---|
Probab=96.46 E-value=0.0022 Score=59.10 Aligned_cols=89 Identities=17% Similarity=0.062 Sum_probs=58.5
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCc---chhhh--hcCCCcEEeecCCCC--HHHHHHHhcCccEEEECC
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK---RNAME--SFGTYVESMAGDASN--KKFLKTALRGVRSIICPS 170 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~---~~~~~--~~~~~v~~v~~D~~d--~~~~~~~~~~~d~Vi~~~ 170 (305)
+++|||+|| |.||..+++.+...|++|+++++++ ++... .++ .+.+ | .+ .+.+.+.-.++|+||.+.
T Consensus 181 g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~~~g--a~~v--~-~~~~~~~~~~~~~~~d~vid~~ 254 (366)
T 2cdc_A 181 CRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVIEETK--TNYY--N-SSNGYDKLKDSVGKFDVIIDAT 254 (366)
T ss_dssp TCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHHHHHT--CEEE--E-CTTCSHHHHHHHCCEEEEEECC
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHHHHhC--Ccee--c-hHHHHHHHHHhCCCCCEEEECC
Confidence 689999999 9999999999999999999999987 55322 233 3444 4 43 123333225799999885
Q ss_pred cc--hH-hhhhhhc-CCCEEEEEccc
Q 021928 171 EG--FI-SNAGSLK-GVQHVILLSQL 192 (305)
Q Consensus 171 ~g--~~-~~~a~~~-gv~~~V~iSS~ 192 (305)
++ .+ ..+.+.. .-.++|.++..
T Consensus 255 g~~~~~~~~~~~~l~~~G~iv~~g~~ 280 (366)
T 2cdc_A 255 GADVNILGNVIPLLGRNGVLGLFGFS 280 (366)
T ss_dssp CCCTHHHHHHGGGEEEEEEEEECSCC
T ss_pred CChHHHHHHHHHHHhcCCEEEEEecC
Confidence 43 23 3332221 12478877654
|
| >3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=96.45 E-value=0.0052 Score=54.02 Aligned_cols=66 Identities=15% Similarity=0.135 Sum_probs=50.6
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEECC
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS 170 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~ 170 (305)
.. +++|.|+ |+.|++++..|++.|. +|++..|+++++.+... .+..+ + .+++.++++++|.||++.
T Consensus 108 ~~-~vliiGa-Gg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~la~-~~~~~--~---~~~~~~~~~~aDiVInat 174 (253)
T 3u62_A 108 KE-PVVVVGA-GGAARAVIYALLQMGVKDIWVVNRTIERAKALDF-PVKIF--S---LDQLDEVVKKAKSLFNTT 174 (253)
T ss_dssp CS-SEEEECC-SHHHHHHHHHHHHTTCCCEEEEESCHHHHHTCCS-SCEEE--E---GGGHHHHHHTCSEEEECS
T ss_pred CC-eEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHH-HcccC--C---HHHHHhhhcCCCEEEECC
Confidence 45 8999997 9999999999999998 99999999887654432 22222 1 234567788999999874
|
| >1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6 | Back alignment and structure |
|---|
Probab=96.42 E-value=0.0022 Score=58.05 Aligned_cols=72 Identities=8% Similarity=0.038 Sum_probs=49.2
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCCeEEEEEc--CcchhhhhcCCCc------EEeecCCCCHHHHHHHhcCccEEEECC
Q 021928 99 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVK--DKRNAMESFGTYV------ESMAGDASNKKFLKTALRGVRSIICPS 170 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R--~~~~~~~~~~~~v------~~v~~D~~d~~~~~~~~~~~d~Vi~~~ 170 (305)
|+|.|.|+ |.+|..++..|++.|++|+++.| ++++......... +.......+.+++.++++++|+||.+.
T Consensus 1 m~I~iiG~-G~mG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~D~vi~~v 79 (335)
T 1txg_A 1 MIVSILGA-GAMGSALSVPLVDNGNEVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLENAEVVLLGV 79 (335)
T ss_dssp CEEEEESC-CHHHHHHHHHHHHHCCEEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHTTCSEEEECS
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCCeEEEEEccCCHHHHHHHHHhCcCcccCccccceEEecHHhHHHHHhcCCEEEEcC
Confidence 58999997 99999999999999999999999 7665433222111 100001122224556788999999884
Q ss_pred c
Q 021928 171 E 171 (305)
Q Consensus 171 ~ 171 (305)
+
T Consensus 80 ~ 80 (335)
T 1txg_A 80 S 80 (335)
T ss_dssp C
T ss_pred C
Confidence 3
|
| >3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum} | Back alignment and structure |
|---|
Probab=96.41 E-value=0.0041 Score=55.55 Aligned_cols=66 Identities=15% Similarity=0.146 Sum_probs=49.9
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEECC
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS 170 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~ 170 (305)
...++++|+|+ |+.|+.++..|.+.|. +|+++.|+.+++.+... .+..+ +.+.+.+ + ++|.||+++
T Consensus 120 ~~~k~vlvlGa-GGaaraia~~L~~~G~~~v~v~nRt~~ka~~La~-~~~~~-----~~~~l~~-l-~~DivInaT 186 (282)
T 3fbt_A 120 IKNNICVVLGS-GGAARAVLQYLKDNFAKDIYVVTRNPEKTSEIYG-EFKVI-----SYDELSN-L-KGDVIINCT 186 (282)
T ss_dssp CTTSEEEEECS-STTHHHHHHHHHHTTCSEEEEEESCHHHHHHHCT-TSEEE-----EHHHHTT-C-CCSEEEECS
T ss_pred ccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHH-hcCcc-----cHHHHHh-c-cCCEEEECC
Confidence 34689999997 8899999999999998 89999999887655433 23322 2234444 4 889999884
|
| >1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6 | Back alignment and structure |
|---|
Probab=96.41 E-value=0.003 Score=57.61 Aligned_cols=73 Identities=12% Similarity=0.022 Sum_probs=48.9
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCC-CcEEeec------CCC-CHHHHHHHhcCccEEEEC
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGT-YVESMAG------DAS-NKKFLKTALRGVRSIICP 169 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~-~v~~v~~------D~~-d~~~~~~~~~~~d~Vi~~ 169 (305)
+|+|+|.|+ |.+|..++..|.+.|++|.++.|++++....... .+.+... .+. ..+++.++++++|+||.+
T Consensus 4 ~mki~iiG~-G~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~ 82 (359)
T 1bg6_A 4 SKTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDADVILIV 82 (359)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTTCSEEEEC
T ss_pred cCeEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHhcCCeEEeccccccccccceecCCHHHHHhcCCEEEEe
Confidence 379999997 9999999999999999999999987664322111 1111100 010 012344567899999988
Q ss_pred Cc
Q 021928 170 SE 171 (305)
Q Consensus 170 ~~ 171 (305)
.+
T Consensus 83 v~ 84 (359)
T 1bg6_A 83 VP 84 (359)
T ss_dssp SC
T ss_pred CC
Confidence 44
|
| >3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A* | Back alignment and structure |
|---|
Probab=96.39 E-value=0.0087 Score=54.57 Aligned_cols=66 Identities=14% Similarity=0.110 Sum_probs=48.6
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCC--eEEEEEcCcchhhh----h---c---CCCcEEeecCCCCHHHHHHHhcCcc
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRT--RIKALVKDKRNAME----S---F---GTYVESMAGDASNKKFLKTALRGVR 164 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~R~~~~~~~----~---~---~~~v~~v~~D~~d~~~~~~~~~~~d 164 (305)
.+++|.|+|+ |.+|+.++..|+..|. +|+++++++++... . . +..+++...| .++++++|
T Consensus 4 ~~~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~-------~~a~~~aD 75 (326)
T 3pqe_A 4 HVNKVALIGA-GFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGT-------YEDCKDAD 75 (326)
T ss_dssp SCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEEC-------GGGGTTCS
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCc-------HHHhCCCC
Confidence 4689999997 9999999999999986 89999998765321 1 1 1234444333 24689999
Q ss_pred EEEECC
Q 021928 165 SIICPS 170 (305)
Q Consensus 165 ~Vi~~~ 170 (305)
+||+++
T Consensus 76 vVvi~a 81 (326)
T 3pqe_A 76 IVCICA 81 (326)
T ss_dssp EEEECC
T ss_pred EEEEec
Confidence 999883
|
| >3pzr_A Aspartate-semialdehyde dehydrogenase; NADP, oxidoreductase-oxidoreductase inhibitor complex; HET: NAP; 1.75A {Vibrio cholerae} PDB: 1mc4_A 1mb4_A* 3q0e_A | Back alignment and structure |
|---|
Probab=96.39 E-value=0.011 Score=54.79 Aligned_cols=88 Identities=15% Similarity=0.065 Sum_probs=51.8
Q ss_pred CEEEEEcCCChHHHHHHH-HHHhCC---CeEEEEE-cCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEECCcch
Q 021928 99 DAVLVTDGDSDIGQMVIL-SLIVKR---TRIKALV-KDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEGF 173 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~-~L~~~g---~~V~~~~-R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~g~ 173 (305)
++|.|.||||++|+++++ .|.++. .+++.++ |+..+....+... +...-|..+.+. +.++|+||.+++..
T Consensus 1 ~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss~~aG~~~~~~~~~-~~~~~~~~~~~~----~~~~Dvvf~a~~~~ 75 (370)
T 3pzr_A 1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQIGVPAPNFGKD-AGMLHDAFDIES----LKQLDAVITCQGGS 75 (370)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTSBCCCSSSC-CCBCEETTCHHH----HTTCSEEEECSCHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCCCCceEEEEEeccccCcCHHHhCCC-ceEEEecCChhH----hccCCEEEECCChH
Confidence 589999999999999999 666655 3566554 3322221112211 122223434333 57999999997654
Q ss_pred H----hhhhhhcCCC-EEEEEcc
Q 021928 174 I----SNAGSLKGVQ-HVILLSQ 191 (305)
Q Consensus 174 ~----~~~a~~~gv~-~~V~iSS 191 (305)
. .....+.|++ ++|=.|+
T Consensus 76 ~s~~~~~~~~~~G~k~~VID~ss 98 (370)
T 3pzr_A 76 YTEKVYPALRQAGWKGYWIDAAS 98 (370)
T ss_dssp HHHHHHHHHHHTTCCCEEEECSS
T ss_pred HHHHHHHHHHHCCCCEEEEeCCc
Confidence 3 3334566775 5554454
|
| >3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B* | Back alignment and structure |
|---|
Probab=96.39 E-value=0.0035 Score=55.98 Aligned_cols=66 Identities=12% Similarity=0.106 Sum_probs=47.6
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcchhhhh---cCC--CcEEeecCCCCHHHHHHHhcCccEEEEC
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMES---FGT--YVESMAGDASNKKFLKTALRGVRSIICP 169 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~---~~~--~v~~v~~D~~d~~~~~~~~~~~d~Vi~~ 169 (305)
...++++|+|+ |++|+.++..|++.|. +|+++.|++++..+. +.. .+..+ ++.+ +..++|.||++
T Consensus 124 l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~~~~~~--~~~~------l~~~aDiIIna 194 (281)
T 3o8q_A 124 LKGATILLIGA-GGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYGEVKAQ--AFEQ------LKQSYDVIINS 194 (281)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGSCEEEE--EGGG------CCSCEEEEEEC
T ss_pred ccCCEEEEECc-hHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccCCeeEe--eHHH------hcCCCCEEEEc
Confidence 35689999998 8999999999999996 999999998774432 221 13333 2222 12688999988
Q ss_pred C
Q 021928 170 S 170 (305)
Q Consensus 170 ~ 170 (305)
+
T Consensus 195 T 195 (281)
T 3o8q_A 195 T 195 (281)
T ss_dssp S
T ss_pred C
Confidence 3
|
| >2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A* | Back alignment and structure |
|---|
Probab=96.39 E-value=0.0035 Score=55.72 Aligned_cols=64 Identities=11% Similarity=-0.060 Sum_probs=47.4
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEECC
Q 021928 99 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS 170 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~ 170 (305)
|+|.|.|+ |.+|..+++.|++.|++|++..|++++.......++.+. .+ ..++++++|+||.+.
T Consensus 1 m~i~iiG~-G~mG~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~----~~---~~~~~~~~Dvvi~~v 64 (296)
T 2gf2_A 1 MPVGFIGL-GNMGNPMAKNLMKHGYPLIIYDVFPDACKEFQDAGEQVV----SS---PADVAEKADRIITML 64 (296)
T ss_dssp CCEEEECC-STTHHHHHHHHHHTTCCEEEECSSTHHHHHHHTTTCEEC----SS---HHHHHHHCSEEEECC
T ss_pred CeEEEEec-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeec----CC---HHHHHhcCCEEEEeC
Confidence 47999995 999999999999999999999998876544333333321 22 345566789999874
|
| >4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=96.38 E-value=0.0088 Score=56.07 Aligned_cols=72 Identities=10% Similarity=0.014 Sum_probs=53.6
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCC----------------CC------HH
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDA----------------SN------KK 154 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~----------------~d------~~ 154 (305)
++.+|+|+|+ |-+|...++.+...|.+|+++++++.+......-+.+++..++ ++ .+
T Consensus 189 ~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~~~ 267 (405)
T 4dio_A 189 PAAKIFVMGA-GVAGLQAIATARRLGAVVSATDVRPAAKEQVASLGAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQAA 267 (405)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSTTHHHHHHHTTCEECCCCC-----------------CHHHHHHHH
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCceeecccccccccccccchhhhcchhhhhhhHh
Confidence 4689999998 9999999999999999999999998763322111234443322 22 24
Q ss_pred HHHHHhcCccEEEEC
Q 021928 155 FLKTALRGVRSIICP 169 (305)
Q Consensus 155 ~~~~~~~~~d~Vi~~ 169 (305)
.+.++++++|+||.+
T Consensus 268 ~l~e~l~~aDVVI~t 282 (405)
T 4dio_A 268 LVAEHIAKQDIVITT 282 (405)
T ss_dssp HHHHHHHTCSEEEEC
T ss_pred HHHHHhcCCCEEEEC
Confidence 788899999999976
|
| >1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A* | Back alignment and structure |
|---|
Probab=96.38 E-value=0.0017 Score=61.49 Aligned_cols=71 Identities=8% Similarity=-0.055 Sum_probs=48.1
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEe-------------ecCCCCHHHHHHHhcCccE
Q 021928 99 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESM-------------AGDASNKKFLKTALRGVRS 165 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v-------------~~D~~d~~~~~~~~~~~d~ 165 (305)
|+|.|.| .|.+|..++..|++.|++|++++|++++..........+. .+.+.-..++.++++++|+
T Consensus 1 mkI~VIG-~G~vG~~~A~~la~~G~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~g~l~~t~~~~~~~~~aDv 79 (436)
T 1mv8_A 1 MRISIFG-LGYVGAVCAGCLSARGHEVIGVDVSSTKIDLINQGKSPIVEPGLEALLQQGRQTGRLSGTTDFKKAVLDSDV 79 (436)
T ss_dssp CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHHTCSE
T ss_pred CEEEEEC-CCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHhhcccCceEEeCCHHHHhccCCE
Confidence 5899999 4999999999999999999999999877543322111100 0111111234456788999
Q ss_pred EEECC
Q 021928 166 IICPS 170 (305)
Q Consensus 166 Vi~~~ 170 (305)
||.+.
T Consensus 80 viiaV 84 (436)
T 1mv8_A 80 SFICV 84 (436)
T ss_dssp EEECC
T ss_pred EEEEc
Confidence 99883
|
| >1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A | Back alignment and structure |
|---|
Probab=96.36 E-value=0.02 Score=45.49 Aligned_cols=83 Identities=16% Similarity=-0.082 Sum_probs=52.5
Q ss_pred CCEEEEEcCC---ChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEECCcc-h
Q 021928 98 RDAVLVTDGD---SDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG-F 173 (305)
Q Consensus 98 ~~~vlVtGat---G~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~g-~ 173 (305)
+++|.|.|++ |.+|..+++.|.+.|++|+. .++.+..+... ++.++ .++.++-+.+|.++.+.+. .
T Consensus 13 p~~vaVvGas~~~g~~G~~~~~~l~~~G~~v~~--vnp~~~~~~i~-G~~~~-------~sl~el~~~vDlavi~vp~~~ 82 (140)
T 1iuk_A 13 AKTIAVLGAHKDPSRPAHYVPRYLREQGYRVLP--VNPRFQGEELF-GEEAV-------ASLLDLKEPVDILDVFRPPSA 82 (140)
T ss_dssp CCEEEEETCCSSTTSHHHHHHHHHHHTTCEEEE--ECGGGTTSEET-TEECB-------SSGGGCCSCCSEEEECSCHHH
T ss_pred CCEEEEECCCCCCCChHHHHHHHHHHCCCEEEE--eCCCcccCcCC-CEEec-------CCHHHCCCCCCEEEEEeCHHH
Confidence 5899999999 89999999999999998554 45543111111 12211 1222333478999877432 2
Q ss_pred ---HhhhhhhcCCCEEEEEc
Q 021928 174 ---ISNAGSLKGVQHVILLS 190 (305)
Q Consensus 174 ---~~~~a~~~gv~~~V~iS 190 (305)
+.+.+.+.|++.+++.+
T Consensus 83 ~~~v~~~~~~~gi~~i~~~~ 102 (140)
T 1iuk_A 83 LMDHLPEVLALRPGLVWLQS 102 (140)
T ss_dssp HTTTHHHHHHHCCSCEEECT
T ss_pred HHHHHHHHHHcCCCEEEEcC
Confidence 33445568898876544
|
| >3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A | Back alignment and structure |
|---|
Probab=96.36 E-value=0.0051 Score=58.44 Aligned_cols=94 Identities=9% Similarity=0.053 Sum_probs=60.1
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh--hcCCCcEEee---cCC--------CCH-------HH
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME--SFGTYVESMA---GDA--------SNK-------KF 155 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~--~~~~~v~~v~---~D~--------~d~-------~~ 155 (305)
.++.+|+|+||+|.||...++.+...|.+|+++++++++... .++.. .++. .|+ .+. +.
T Consensus 227 ~~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~~~lGa~-~vi~~~~~d~~~~~~~~~~~~~~~~~~~~~ 305 (456)
T 3krt_A 227 KQGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEICRAMGAE-AIIDRNAEGYRFWKDENTQDPKEWKRFGKR 305 (456)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCC-EEEETTTTTCCSEEETTEECHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHHHhhCCc-EEEecCcCcccccccccccchHHHHHHHHH
Confidence 456899999999999999999999999999999988766332 23321 1111 111 111 44
Q ss_pred HHHHhc--CccEEEECCcchHhh----hhhhcCCCEEEEEccc
Q 021928 156 LKTALR--GVRSIICPSEGFISN----AGSLKGVQHVILLSQL 192 (305)
Q Consensus 156 ~~~~~~--~~d~Vi~~~~g~~~~----~a~~~gv~~~V~iSS~ 192 (305)
+.++.. ++|+||.+.++.... .++.. .++|.++..
T Consensus 306 i~~~t~g~g~Dvvid~~G~~~~~~~~~~l~~~--G~iv~~G~~ 346 (456)
T 3krt_A 306 IRELTGGEDIDIVFEHPGRETFGASVFVTRKG--GTITTCAST 346 (456)
T ss_dssp HHHHHTSCCEEEEEECSCHHHHHHHHHHEEEE--EEEEESCCT
T ss_pred HHHHhCCCCCcEEEEcCCchhHHHHHHHhhCC--cEEEEEecC
Confidence 555553 789999886543222 22223 377777654
|
| >1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A* | Back alignment and structure |
|---|
Probab=96.36 E-value=0.0069 Score=56.79 Aligned_cols=72 Identities=13% Similarity=0.065 Sum_probs=51.3
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCC-------------CH-------HHH
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDAS-------------NK-------KFL 156 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~-------------d~-------~~~ 156 (305)
++++|+|+|+ |.+|..+++.+...|.+|++++|++........-+.+++..|.. +. +.+
T Consensus 171 ~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~~~lGa~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l 249 (401)
T 1x13_A 171 PPAKVMVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQSMGAEFLELDFKEEAGSGDGYAKVMSDAFIKAEMELF 249 (401)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCGGGHHHHHHTTCEECCC--------CCHHHHHHSHHHHHHHHHHH
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCEEEEecccccccccccchhhccHHHHHHHHHHH
Confidence 4689999997 99999999999999999999999887643221113444433321 11 146
Q ss_pred HHHhcCccEEEEC
Q 021928 157 KTALRGVRSIICP 169 (305)
Q Consensus 157 ~~~~~~~d~Vi~~ 169 (305)
.+.+.++|+||.+
T Consensus 250 ~e~~~~aDvVI~~ 262 (401)
T 1x13_A 250 AAQAKEVDIIVTT 262 (401)
T ss_dssp HHHHHHCSEEEEC
T ss_pred HHHhCCCCEEEEC
Confidence 7788889999976
|
| >3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP} | Back alignment and structure |
|---|
Probab=96.36 E-value=0.0029 Score=55.06 Aligned_cols=70 Identities=9% Similarity=0.043 Sum_probs=48.0
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcch--------------hhhhcCCCcEEeecCCCCHHHHHHHh
Q 021928 95 PEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN--------------AMESFGTYVESMAGDASNKKFLKTAL 160 (305)
Q Consensus 95 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~--------------~~~~~~~~v~~v~~D~~d~~~~~~~~ 160 (305)
....++|.|.| .|.+|..+++.|++.|++|++..|++++ ..+.... . +.. ...+..+++
T Consensus 16 ~~~~~kIgiIG-~G~mG~alA~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-~----~~~-~~~~~~e~~ 88 (245)
T 3dtt_A 16 YFQGMKIAVLG-TGTVGRTMAGALADLGHEVTIGTRDPKATLARAEPDAMGAPPFSQWLPE-H----PHV-HLAAFADVA 88 (245)
T ss_dssp ---CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHTCC-------CCHHHHGGG-S----TTC-EEEEHHHHH
T ss_pred ccCCCeEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCChhhhhhhhhhhhhcchhhhHHHhh-c----Cce-eccCHHHHH
Confidence 34569999998 5999999999999999999999999876 1111110 0 000 112345667
Q ss_pred cCccEEEECCc
Q 021928 161 RGVRSIICPSE 171 (305)
Q Consensus 161 ~~~d~Vi~~~~ 171 (305)
+++|+||.+.+
T Consensus 89 ~~aDvVilavp 99 (245)
T 3dtt_A 89 AGAELVVNATE 99 (245)
T ss_dssp HHCSEEEECSC
T ss_pred hcCCEEEEccC
Confidence 88999998843
|
| >3uw3_A Aspartate-semialdehyde dehydrogenase; structural genomics, seattle structural genomics center for infectious disease (ssgcid); 1.55A {Burkholderia thailandensis} | Back alignment and structure |
|---|
Probab=96.34 E-value=0.013 Score=54.57 Aligned_cols=90 Identities=14% Similarity=-0.001 Sum_probs=53.4
Q ss_pred CCEEEEEcCCChHHHHHHH-HHHhCC---CeEEEEEcC-cchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEECCcc
Q 021928 98 RDAVLVTDGDSDIGQMVIL-SLIVKR---TRIKALVKD-KRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG 172 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~-~L~~~g---~~V~~~~R~-~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~g 172 (305)
+++|.|.||||++|+++++ .|.++. .+++.++-+ ..+....+... ....-+..+.+. +.++|+||.+++.
T Consensus 4 ~~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss~~aG~~~~~~~~~-~~~v~~~~~~~~----~~~vDvvf~a~~~ 78 (377)
T 3uw3_A 4 SMNVGLVGWRGMVGSVLMQRMQEEGDFDLIEPVFFSTSNAGGKAPSFAKN-ETTLKDATSIDD----LKKCDVIITCQGG 78 (377)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSCTTSBCCTTCCS-CCBCEETTCHHH----HHTCSEEEECSCH
T ss_pred CCEEEEECCCCHHHHHHHHHHHhhCCCCceEEEEEechhcCCCHHHcCCC-ceEEEeCCChhH----hcCCCEEEECCCh
Confidence 4799999999999999999 666555 356555432 22221112221 122224444333 5799999999765
Q ss_pred hH----hhhhhhcCCC-EEEEEccc
Q 021928 173 FI----SNAGSLKGVQ-HVILLSQL 192 (305)
Q Consensus 173 ~~----~~~a~~~gv~-~~V~iSS~ 192 (305)
.. .....+.|++ ++|=.|+.
T Consensus 79 ~~s~~~~~~~~~~G~k~~VID~ss~ 103 (377)
T 3uw3_A 79 DYTNDVFPKLRAAGWNGYWIDAASS 103 (377)
T ss_dssp HHHHHHHHHHHHTTCCSEEEECSST
T ss_pred HHHHHHHHHHHHCCCCEEEEeCCcc
Confidence 43 3334567875 55555553
|
| >3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=96.34 E-value=0.0025 Score=57.42 Aligned_cols=67 Identities=15% Similarity=0.083 Sum_probs=49.7
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEECCc
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE 171 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~ 171 (305)
++++|.|.|. |.+|..+++.|++.|++|++..|++++.......++.. . +++.++++++|+||.+.+
T Consensus 8 ~~~~IgiIG~-G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~----~---~~~~e~~~~aDvVi~~vp 74 (306)
T 3l6d_A 8 FEFDVSVIGL-GAMGTIMAQVLLKQGKRVAIWNRSPGKAAALVAAGAHL----C---ESVKAALSASPATIFVLL 74 (306)
T ss_dssp CSCSEEEECC-SHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTCEE----C---SSHHHHHHHSSEEEECCS
T ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCee----c---CCHHHHHhcCCEEEEEeC
Confidence 3578999985 99999999999999999999999987754332222221 1 234566778899998744
|
| >1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A* | Back alignment and structure |
|---|
Probab=96.34 E-value=0.0092 Score=54.46 Aligned_cols=68 Identities=18% Similarity=0.131 Sum_probs=48.0
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcchhhhh----------cCCCcEEeecCCCCHHHHHHHhcCccE
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMES----------FGTYVESMAGDASNKKFLKTALRGVRS 165 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~----------~~~~v~~v~~D~~d~~~~~~~~~~~d~ 165 (305)
++++|.|+|| |.+|..++..|+..|+ +|+++++++++.... ......+... .| ++++++++|.
T Consensus 8 ~~~kI~VIGa-G~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t--~d---~~ea~~~aDi 81 (331)
T 1pzg_A 8 RRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAE--YS---YEAALTGADC 81 (331)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEE--CS---HHHHHTTCSE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHhhhhccCCCCEEEEe--CC---HHHHhCCCCE
Confidence 4579999998 9999999999999998 999999987653321 1111111110 23 4457899999
Q ss_pred EEECC
Q 021928 166 IICPS 170 (305)
Q Consensus 166 Vi~~~ 170 (305)
||.+.
T Consensus 82 Vi~a~ 86 (331)
T 1pzg_A 82 VIVTA 86 (331)
T ss_dssp EEECC
T ss_pred EEEcc
Confidence 99873
|
| >1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A | Back alignment and structure |
|---|
Probab=96.34 E-value=0.0029 Score=58.10 Aligned_cols=91 Identities=11% Similarity=0.057 Sum_probs=58.1
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh--hcCCCcEEeecCCCCH-HHHHHHhcCccEEEECCcc
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME--SFGTYVESMAGDASNK-KFLKTALRGVRSIICPSEG 172 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~--~~~~~v~~v~~D~~d~-~~~~~~~~~~d~Vi~~~~g 172 (305)
.++.+|||+|| |.+|...++.+...|.+|+++++++++... .++.. .+ .|..+. +..++...++|+||.+.++
T Consensus 178 ~~g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~lGa~-~v--~~~~~~~~~~~~~~~~~D~vid~~g~ 253 (360)
T 1piw_A 178 GPGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAMKMGAD-HY--IATLEEGDWGEKYFDTFDLIVVCASS 253 (360)
T ss_dssp STTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCS-EE--EEGGGTSCHHHHSCSCEEEEEECCSC
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCC-EE--EcCcCchHHHHHhhcCCCEEEECCCC
Confidence 35689999999 999999999888899999999988766332 23321 22 233332 2233333689999988543
Q ss_pred ----hHhh---hhhhcCCCEEEEEccc
Q 021928 173 ----FISN---AGSLKGVQHVILLSQL 192 (305)
Q Consensus 173 ----~~~~---~a~~~gv~~~V~iSS~ 192 (305)
.+.. ..+.. .++|.++..
T Consensus 254 ~~~~~~~~~~~~l~~~--G~iv~~g~~ 278 (360)
T 1piw_A 254 LTDIDFNIMPKAMKVG--GRIVSISIP 278 (360)
T ss_dssp STTCCTTTGGGGEEEE--EEEEECCCC
T ss_pred CcHHHHHHHHHHhcCC--CEEEEecCC
Confidence 2222 22333 377776543
|
| >2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae} | Back alignment and structure |
|---|
Probab=96.33 E-value=0.0037 Score=50.11 Aligned_cols=83 Identities=6% Similarity=0.003 Sum_probs=52.3
Q ss_pred CCEEEEEcCC---ChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEECCc-ch
Q 021928 98 RDAVLVTDGD---SDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE-GF 173 (305)
Q Consensus 98 ~~~vlVtGat---G~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~-g~ 173 (305)
+++|.|.|++ |.+|..+++.|.+.|++|+.+.++... .+.. ++.++ -++. ++.+.+|+++.+.+ ..
T Consensus 13 p~~IavIGas~~~g~~G~~~~~~L~~~G~~v~~vnp~~~g-~~i~--G~~~~-~sl~------el~~~~Dlvii~vp~~~ 82 (145)
T 2duw_A 13 TRTIALVGASDKPDRPSYRVMKYLLDQGYHVIPVSPKVAG-KTLL--GQQGY-ATLA------DVPEKVDMVDVFRNSEA 82 (145)
T ss_dssp CCCEEEESCCSCTTSHHHHHHHHHHHHTCCEEEECSSSTT-SEET--TEECC-SSTT------TCSSCCSEEECCSCSTH
T ss_pred CCEEEEECcCCCCCChHHHHHHHHHHCCCEEEEeCCcccc-cccC--Ceecc-CCHH------HcCCCCCEEEEEeCHHH
Confidence 5889999998 889999999999999997766554310 1111 12221 2232 23357899997733 22
Q ss_pred ---HhhhhhhcCCCEEEEEc
Q 021928 174 ---ISNAGSLKGVQHVILLS 190 (305)
Q Consensus 174 ---~~~~a~~~gv~~~V~iS 190 (305)
+.+.+.+.|++.++..+
T Consensus 83 v~~v~~~~~~~g~~~i~i~~ 102 (145)
T 2duw_A 83 AWGVAQEAIAIGAKTLWLQL 102 (145)
T ss_dssp HHHHHHHHHHHTCCEEECCT
T ss_pred HHHHHHHHHHcCCCEEEEcC
Confidence 23334457888876643
|
| >4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=96.32 E-value=0.0019 Score=55.29 Aligned_cols=67 Identities=6% Similarity=-0.042 Sum_probs=47.4
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEE-EEcCcchhhhhcCC-CcEEeecCCCCHHHHHHHhcCccEEEECCc
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKA-LVKDKRNAMESFGT-YVESMAGDASNKKFLKTALRGVRSIICPSE 171 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~-~~R~~~~~~~~~~~-~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~ 171 (305)
++|+|.|.| +|.+|..+++.|++.|++|++ ..|++++..+.... ++.... .+. +.++++|+||.+.+
T Consensus 22 ~mmkI~IIG-~G~mG~~la~~l~~~g~~V~~v~~r~~~~~~~l~~~~g~~~~~---~~~----~~~~~aDvVilavp 90 (220)
T 4huj_A 22 SMTTYAIIG-AGAIGSALAERFTAAQIPAIIANSRGPASLSSVTDRFGASVKA---VEL----KDALQADVVILAVP 90 (220)
T ss_dssp GSCCEEEEE-CHHHHHHHHHHHHHTTCCEEEECTTCGGGGHHHHHHHTTTEEE---CCH----HHHTTSSEEEEESC
T ss_pred cCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEECCCHHHHHHHHHHhCCCccc---ChH----HHHhcCCEEEEeCC
Confidence 358999999 599999999999999999999 78887765432110 122211 122 33678999998844
|
| >4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=96.31 E-value=0.0052 Score=55.68 Aligned_cols=65 Identities=8% Similarity=-0.099 Sum_probs=47.4
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCC-CeEEEEEcCcc-------hhhhhcCCCcEEeecCCCCHH-HHHHHhcCccEEE
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKR-------NAMESFGTYVESMAGDASNKK-FLKTALRGVRSII 167 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~R~~~-------~~~~~~~~~v~~v~~D~~d~~-~~~~~~~~~d~Vi 167 (305)
++|+|.|.|+ |.+|..+++.|++.| ++|++..|+++ ........++ . . +..++++++|+||
T Consensus 23 M~m~IgvIG~-G~mG~~lA~~L~~~G~~~V~~~dr~~~~~~~~~~~~~~~~~~g~---~------~~s~~e~~~~aDvVi 92 (317)
T 4ezb_A 23 MMTTIAFIGF-GEAAQSIAGGLGGRNAARLAAYDLRFNDPAASGALRARAAELGV---E------PLDDVAGIACADVVL 92 (317)
T ss_dssp SCCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECGGGGCTTTHHHHHHHHHHTTC---E------EESSGGGGGGCSEEE
T ss_pred cCCeEEEECc-cHHHHHHHHHHHHcCCCeEEEEeCCCccccchHHHHHHHHHCCC---C------CCCHHHHHhcCCEEE
Confidence 5689999995 999999999999999 99999999873 2221111222 1 2 2345678899999
Q ss_pred ECCc
Q 021928 168 CPSE 171 (305)
Q Consensus 168 ~~~~ 171 (305)
.+.+
T Consensus 93 ~avp 96 (317)
T 4ezb_A 93 SLVV 96 (317)
T ss_dssp ECCC
T ss_pred EecC
Confidence 8843
|
| >2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A | Back alignment and structure |
|---|
Probab=96.30 E-value=0.0043 Score=54.12 Aligned_cols=66 Identities=9% Similarity=-0.006 Sum_probs=47.9
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCC-CcEEeecCCCCHHHHHHHhcCccEEEECCc
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGT-YVESMAGDASNKKFLKTALRGVRSIICPSE 171 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~-~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~ 171 (305)
+|+|.|.| .|.+|+.+++.|.+.|++|.+.+|++++....... ++.+ ..+ +.++++++|+||.+.+
T Consensus 3 ~m~i~iiG-~G~mG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~g~~~----~~~---~~~~~~~~D~Vi~~v~ 69 (259)
T 2ahr_A 3 AMKIGIIG-VGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQLALPY----AMS---HQDLIDQVDLVILGIK 69 (259)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHHTCCB----CSS---HHHHHHTCSEEEECSC
T ss_pred ccEEEEEC-CCHHHHHHHHHHHhCCCeEEEECCCHHHHHHHHHHcCCEe----eCC---HHHHHhcCCEEEEEeC
Confidence 47999999 59999999999999999999999987764332111 1221 123 3456678999998854
|
| >3tz6_A Aspartate-semialdehyde dehydrogenase; asadh, ASD, ASA, amino-acid biosynthesis, diaminopimelate biosynthesis, lysine biosynthesis; HET: SO4; 1.95A {Mycobacterium tuberculosis} PDB: 3vos_A* 3kub_A 3llg_A | Back alignment and structure |
|---|
Probab=96.30 E-value=0.016 Score=53.27 Aligned_cols=86 Identities=15% Similarity=0.154 Sum_probs=52.4
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCC---eEEEEEcC--cchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEECCcch
Q 021928 99 DAVLVTDGDSDIGQMVILSLIVKRT---RIKALVKD--KRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEGF 173 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~~~g~---~V~~~~R~--~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~g~ 173 (305)
++|.|.||||++|+++++.|.++.+ +++.+.-. ..+... +.. .+...-|+.+ ..+.++|+||.+++..
T Consensus 2 ~~VaIvGatG~vG~el~~lL~~h~fp~~el~~~~s~~~aG~~~~-~~~-~~~~~~~~~~-----~~~~~~Dvvf~a~~~~ 74 (344)
T 3tz6_A 2 LSIGIVGATGQVGQVMRTLLDERDFPASAVRFFASARSQGRKLA-FRG-QEIEVEDAET-----ADPSGLDIALFSAGSA 74 (344)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTSSCEEE-ETT-EEEEEEETTT-----SCCTTCSEEEECSCHH
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCceEEEEEECcccCCCcee-ecC-CceEEEeCCH-----HHhccCCEEEECCChH
Confidence 6899999999999999999998754 45555422 112111 221 1222223322 2357999999987654
Q ss_pred H----hhhhhhcCCCEEEEEccc
Q 021928 174 I----SNAGSLKGVQHVILLSQL 192 (305)
Q Consensus 174 ~----~~~a~~~gv~~~V~iSS~ 192 (305)
. .....+.|+ ++|-.|+.
T Consensus 75 ~s~~~a~~~~~~G~-~vID~Sa~ 96 (344)
T 3tz6_A 75 MSKVQAPRFAAAGV-TVIDNSSA 96 (344)
T ss_dssp HHHHHHHHHHHTTC-EEEECSST
T ss_pred HHHHHHHHHHhCCC-EEEECCCc
Confidence 2 333455676 56666764
|
| >3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A* | Back alignment and structure |
|---|
Probab=96.29 E-value=0.011 Score=53.93 Aligned_cols=68 Identities=7% Similarity=0.169 Sum_probs=48.9
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCC--eEEEEEcCcchhh----hh-----cCCCcEEeecCCCCHHHHHHHhcCc
Q 021928 95 PEARDAVLVTDGDSDIGQMVILSLIVKRT--RIKALVKDKRNAM----ES-----FGTYVESMAGDASNKKFLKTALRGV 163 (305)
Q Consensus 95 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~R~~~~~~----~~-----~~~~v~~v~~D~~d~~~~~~~~~~~ 163 (305)
+..+++|.|+|| |.+|+.++..|+..|. +|+++++++++.. +. +...+++...| .++++++
T Consensus 6 ~~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~~~-------~~a~~~a 77 (326)
T 3vku_A 6 DKDHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYSAE-------YSDAKDA 77 (326)
T ss_dssp -CCCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECC-------GGGGTTC
T ss_pred cCCCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEECc-------HHHhcCC
Confidence 345689999997 9999999999999886 8999998876532 11 11234444332 3569999
Q ss_pred cEEEECC
Q 021928 164 RSIICPS 170 (305)
Q Consensus 164 d~Vi~~~ 170 (305)
|+||+++
T Consensus 78 DiVvi~a 84 (326)
T 3vku_A 78 DLVVITA 84 (326)
T ss_dssp SEEEECC
T ss_pred CEEEECC
Confidence 9999883
|
| >3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus} | Back alignment and structure |
|---|
Probab=96.29 E-value=0.0087 Score=54.60 Aligned_cols=73 Identities=12% Similarity=0.168 Sum_probs=50.9
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh--hcCCCcEEeecCCCC--HHHHHHHh-cCccEEEECCc
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME--SFGTYVESMAGDASN--KKFLKTAL-RGVRSIICPSE 171 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~--~~~~~v~~v~~D~~d--~~~~~~~~-~~~d~Vi~~~~ 171 (305)
++++|||+||+|.+|...++.+...|.+|+++++++++... .++. ..+ .|..+ .+.+.+.- .++|+||.+.+
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa--~~v-i~~~~~~~~~~~~~~~~g~Dvv~d~~g 226 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKKMGA--DIV-LNHKESLLNQFKTQGIELVDYVFCTFN 226 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHHHTC--SEE-ECTTSCHHHHHHHHTCCCEEEEEESSC
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCC--cEE-EECCccHHHHHHHhCCCCccEEEECCC
Confidence 56899999999999999999999999999999998766322 2332 211 23322 23344432 36899998855
Q ss_pred c
Q 021928 172 G 172 (305)
Q Consensus 172 g 172 (305)
+
T Consensus 227 ~ 227 (346)
T 3fbg_A 227 T 227 (346)
T ss_dssp H
T ss_pred c
Confidence 4
|
| >3hsk_A Aspartate-semialdehyde dehydrogenase; candida albicans NADP complex, amino-acid biosynthesis; HET: NAP; 2.20A {Candida albicans} | Back alignment and structure |
|---|
Probab=96.26 E-value=0.011 Score=55.02 Aligned_cols=90 Identities=13% Similarity=0.067 Sum_probs=52.7
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCC-CeEEEEE--c-Ccchhh-hhcC-----------CCcEEeecCCCCHHHHHHHh
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKR-TRIKALV--K-DKRNAM-ESFG-----------TYVESMAGDASNKKFLKTAL 160 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~--R-~~~~~~-~~~~-----------~~v~~v~~D~~d~~~~~~~~ 160 (305)
++++|.|.||||++|+++++.|.+.. .++..+. + +..+.. +.++ ....+...|.. ..+
T Consensus 18 ~~~kVaIvGAtG~vG~ell~lL~~hp~~el~~l~aS~~saGk~~~~~~~~~~~~~~p~~~~~~~v~~~~~~------~~~ 91 (381)
T 3hsk_A 18 SVKKAGVLGATGSVGQRFILLLSKHPEFEIHALGASSRSAGKKYKDAASWKQTETLPETEQDIVVQECKPE------GNF 91 (381)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEECTTTTTSBHHHHCCCCCSSCCCHHHHTCBCEESSSC------TTG
T ss_pred CccEEEEECCCChHHHHHHHHHHcCCCceEEEeeccccccCCCHHHhcccccccccccccccceEEeCchh------hhc
Confidence 34689999999999999999888765 3676553 3 222211 1111 01122222211 035
Q ss_pred cCccEEEECCcch----HhhhhhhcCCCEEEEEcccc
Q 021928 161 RGVRSIICPSEGF----ISNAGSLKGVQHVILLSQLS 193 (305)
Q Consensus 161 ~~~d~Vi~~~~g~----~~~~a~~~gv~~~V~iSS~~ 193 (305)
.++|+||.+.+.. ....+.+.|++ +|-.|+..
T Consensus 92 ~~~Dvvf~alp~~~s~~~~~~~~~~G~~-VIDlSa~f 127 (381)
T 3hsk_A 92 LECDVVFSGLDADVAGDIEKSFVEAGLA-VVSNAKNY 127 (381)
T ss_dssp GGCSEEEECCCHHHHHHHHHHHHHTTCE-EEECCSTT
T ss_pred ccCCEEEECCChhHHHHHHHHHHhCCCE-EEEcCCcc
Confidence 7899999996644 33334556764 66666653
|
| >1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A* | Back alignment and structure |
|---|
Probab=96.26 E-value=0.021 Score=51.48 Aligned_cols=66 Identities=17% Similarity=0.134 Sum_probs=46.2
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcchhhhh----c------CCCcEEeecCCCCHHHHHHHhcCccEE
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMES----F------GTYVESMAGDASNKKFLKTALRGVRSI 166 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~----~------~~~v~~v~~D~~d~~~~~~~~~~~d~V 166 (305)
+++|.|+|| |.+|..++..|+..|+ +|+++++++++.... . ....++... .| . ++++++|.|
T Consensus 2 ~~kI~VIGa-G~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t--~d---~-~a~~~aD~V 74 (309)
T 1ur5_A 2 RKKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGT--NN---Y-ADTANSDVI 74 (309)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEE--SC---G-GGGTTCSEE
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEEC--CC---H-HHHCCCCEE
Confidence 479999999 9999999999999997 888888877553211 0 111222210 22 2 568999999
Q ss_pred EECC
Q 021928 167 ICPS 170 (305)
Q Consensus 167 i~~~ 170 (305)
|.+.
T Consensus 75 i~a~ 78 (309)
T 1ur5_A 75 VVTS 78 (309)
T ss_dssp EECC
T ss_pred EEcC
Confidence 9883
|
| >2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1} | Back alignment and structure |
|---|
Probab=96.25 E-value=0.0072 Score=51.27 Aligned_cols=50 Identities=8% Similarity=0.034 Sum_probs=41.2
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEECCc
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE 171 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~ 171 (305)
..+++|.|.| .|.+|..+++.|.+.|++|++..|+++ +++++|.||.+.+
T Consensus 17 ~~~~~I~iiG-~G~mG~~la~~l~~~g~~V~~~~~~~~-------------------------~~~~aD~vi~av~ 66 (209)
T 2raf_A 17 FQGMEITIFG-KGNMGQAIGHNFEIAGHEVTYYGSKDQ-------------------------ATTLGEIVIMAVP 66 (209)
T ss_dssp ---CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECTTCC-------------------------CSSCCSEEEECSC
T ss_pred cCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEcCCHH-------------------------HhccCCEEEEcCC
Confidence 3468999999 599999999999999999999988763 5678899998844
|
| >2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A | Back alignment and structure |
|---|
Probab=96.25 E-value=0.0039 Score=55.29 Aligned_cols=67 Identities=15% Similarity=0.211 Sum_probs=49.5
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCC-CcEEeecCCCCHHHHHHHhcCccEEEECCc
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGT-YVESMAGDASNKKFLKTALRGVRSIICPSE 171 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~-~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~ 171 (305)
..++|+|.|+ |.+|+.+++.|.+.|++|.+..|++++..+.... ++.+ .+ ++.++++++|+||.+.+
T Consensus 128 ~~~~v~iiGa-G~~g~aia~~L~~~g~~V~v~~r~~~~~~~l~~~~g~~~--~~-----~~~~~~~~aDiVi~atp 195 (275)
T 2hk9_A 128 KEKSILVLGA-GGASRAVIYALVKEGAKVFLWNRTKEKAIKLAQKFPLEV--VN-----SPEEVIDKVQVIVNTTS 195 (275)
T ss_dssp GGSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSHHHHHHHTTTSCEEE--CS-----CGGGTGGGCSEEEECSS
T ss_pred CCCEEEEECc-hHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHcCCee--eh-----hHHhhhcCCCEEEEeCC
Confidence 4589999996 9999999999999999999999998765443221 2222 11 23456788999998843
|
| >1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=96.25 E-value=0.009 Score=54.81 Aligned_cols=90 Identities=16% Similarity=0.113 Sum_probs=58.6
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhC-CCeEEEEEcCcchhhh--hcCCCcEEeecCCCCH--HHHHHHhc--CccEEEEC
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVK-RTRIKALVKDKRNAME--SFGTYVESMAGDASNK--KFLKTALR--GVRSIICP 169 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~R~~~~~~~--~~~~~v~~v~~D~~d~--~~~~~~~~--~~d~Vi~~ 169 (305)
++.+|||+|| |.+|...++.+... |.+|+++++++++... .++ ...+ .|..+. +.+.++-. ++|+||.+
T Consensus 186 ~g~~VlV~Ga-G~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~~~lG--a~~v-i~~~~~~~~~v~~~~~g~g~Dvvid~ 261 (359)
T 1h2b_A 186 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERLG--ADHV-VDARRDPVKQVMELTRGRGVNVAMDF 261 (359)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHHTT--CSEE-EETTSCHHHHHHHHTTTCCEEEEEES
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhC--CCEE-EeccchHHHHHHHHhCCCCCcEEEEC
Confidence 5689999999 99999999888888 9999999998766332 233 2221 344442 34444443 68999988
Q ss_pred Ccc----hHhhhhhhcCCCEEEEEcc
Q 021928 170 SEG----FISNAGSLKGVQHVILLSQ 191 (305)
Q Consensus 170 ~~g----~~~~~a~~~gv~~~V~iSS 191 (305)
.++ .+..+.+. .-.++|.++.
T Consensus 262 ~G~~~~~~~~~~~~~-~~G~~v~~g~ 286 (359)
T 1h2b_A 262 VGSQATVDYTPYLLG-RMGRLIIVGY 286 (359)
T ss_dssp SCCHHHHHHGGGGEE-EEEEEEECCC
T ss_pred CCCchHHHHHHHhhc-CCCEEEEEeC
Confidence 554 33333333 3347777654
|
| >1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A* | Back alignment and structure |
|---|
Probab=96.24 E-value=0.022 Score=52.47 Aligned_cols=70 Identities=11% Similarity=0.100 Sum_probs=54.3
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhc--CccEEEEC
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--GVRSIICP 169 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~--~~d~Vi~~ 169 (305)
++|+|+|+|+ |.+|+.+++.+.+.|++|+++..++......... +.+..|..|.+.+.++++ ++|+|+..
T Consensus 10 ~~~~ili~g~-g~~~~~~~~a~~~~G~~v~~~~~~~~~~~~~~~d--~~~~~~~~d~~~l~~~~~~~~~d~v~~~ 81 (391)
T 1kjq_A 10 AATRVMLLGS-GELGKEVAIECQRLGVEVIAVDRYADAPAMHVAH--RSHVINMLDGDALRRVVELEKPHYIVPE 81 (391)
T ss_dssp TCCEEEEESC-SHHHHHHHHHHHTTTCEEEEEESSTTCGGGGGSS--EEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEECCCCCchhhhcc--ceEECCCCCHHHHHHHHHHcCCCEEEEC
Confidence 4689999987 7899999999999999999998776442222222 456678889888888775 78999865
|
| >3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A* | Back alignment and structure |
|---|
Probab=96.23 E-value=0.02 Score=52.34 Aligned_cols=87 Identities=13% Similarity=0.099 Sum_probs=57.4
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCc-------------------chhh------hhcCCCcEE--eec
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDK-------------------RNAM------ESFGTYVES--MAG 148 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~-------------------~~~~------~~~~~~v~~--v~~ 148 (305)
...+|+|.|+ |++|+++++.|+..|. ++.+++++. .|.. ..+.+.+++ +..
T Consensus 33 ~~~~VlIvGa-GGlGs~va~~La~aGVg~ItlvD~D~Ve~SNL~RQ~l~~~~diG~~Ka~aaa~~L~~inP~v~v~~~~~ 111 (340)
T 3rui_A 33 KNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGVKL 111 (340)
T ss_dssp HTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCBCCTTSTTTSTTCCGGGTTSBHHHHHHHHHHHHCTTCEEEEECC
T ss_pred hCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEecCCEeccccccccccCChhhcChHHHHHHHHHHHHhCCCCEEEEEec
Confidence 4589999998 9999999999999996 777776643 1110 112234444 333
Q ss_pred CC--------------CCHHHHHHHhcCccEEEECCcch-----HhhhhhhcCCC
Q 021928 149 DA--------------SNKKFLKTALRGVRSIICPSEGF-----ISNAGSLKGVQ 184 (305)
Q Consensus 149 D~--------------~d~~~~~~~~~~~d~Vi~~~~g~-----~~~~a~~~gv~ 184 (305)
++ .+.+.+.+.++++|+||.+.... +.++|...+++
T Consensus 112 ~i~~~g~~~~~~~~~~~~~~~l~~~l~~~DlVvd~tDn~~tR~lin~~c~~~~~p 166 (340)
T 3rui_A 112 SIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVDSRESRWLPSLLSNIENKT 166 (340)
T ss_dssp CCCCTTSCCSCHHHHHHHHHHHHHHHHHCSEEEECCSSTGGGHHHHHHHHHTTCE
T ss_pred cccccCcccchhhhhcCCHHHHHhhhccCCEEEecCCCHHHHHHHHHHHHHcCCc
Confidence 33 13355678889999999884432 44566666654
|
| >4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans} | Back alignment and structure |
|---|
Probab=96.22 E-value=0.0048 Score=55.46 Aligned_cols=65 Identities=6% Similarity=-0.035 Sum_probs=42.2
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEEC
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 169 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~ 169 (305)
|.++|.+.|- |..|..+++.|++.||+|++..|++++..+....+.+.. ++..++++.+|+||.+
T Consensus 4 Ms~kIgfIGL-G~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~-------~s~~e~~~~~dvvi~~ 68 (297)
T 4gbj_A 4 MSEKIAFLGL-GNLGTPIAEILLEAGYELVVWNRTASKAEPLTKLGATVV-------ENAIDAITPGGIVFSV 68 (297)
T ss_dssp CCCEEEEECC-STTHHHHHHHHHHTTCEEEEC-------CTTTTTTCEEC-------SSGGGGCCTTCEEEEC
T ss_pred CCCcEEEEec-HHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCeEe-------CCHHHHHhcCCceeee
Confidence 4578999996 999999999999999999999999887654433333321 2334556677777765
|
| >3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa} | Back alignment and structure |
|---|
Probab=96.22 E-value=0.04 Score=50.40 Aligned_cols=95 Identities=13% Similarity=-0.022 Sum_probs=59.7
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCe-EEEEEcCcchhhh--hcCCCcEEeecCCCCHHHH----HHHh--cCccEE
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTR-IKALVKDKRNAME--SFGTYVESMAGDASNKKFL----KTAL--RGVRSI 166 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~-V~~~~R~~~~~~~--~~~~~v~~v~~D~~d~~~~----~~~~--~~~d~V 166 (305)
.++.+|||+|| |.+|...++.+...|.+ |+++.+++++... .+...+..+..|-.+.+.+ .+.. +++|+|
T Consensus 178 ~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~v~~~t~g~g~Dvv 256 (363)
T 3m6i_A 178 RLGDPVLICGA-GPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEICPEVVTHKVERLSAEESAKKIVESFGGIEPAVA 256 (363)
T ss_dssp CTTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHHCTTCEEEECCSCCHHHHHHHHHHHTSSCCCSEE
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhchhcccccccccchHHHHHHHHHHhCCCCCCEE
Confidence 35689999998 99999999988899987 8888888766321 1233333333443333333 3333 268999
Q ss_pred EECCcch--Hhhhhhh-cCCCEEEEEcc
Q 021928 167 ICPSEGF--ISNAGSL-KGVQHVILLSQ 191 (305)
Q Consensus 167 i~~~~g~--~~~~a~~-~gv~~~V~iSS 191 (305)
|.+.++. +..+.+. ..-.++|.++.
T Consensus 257 id~~g~~~~~~~~~~~l~~~G~iv~~G~ 284 (363)
T 3m6i_A 257 LECTGVESSIAAAIWAVKFGGKVFVIGV 284 (363)
T ss_dssp EECSCCHHHHHHHHHHSCTTCEEEECCC
T ss_pred EECCCChHHHHHHHHHhcCCCEEEEEcc
Confidence 9885542 3333222 12247887764
|
| >3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=96.22 E-value=0.011 Score=52.54 Aligned_cols=65 Identities=9% Similarity=0.075 Sum_probs=49.6
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCC---eEEEEEcCcchhhhhcCC-CcEEeecCCCCHHHHHHHhcCccEEEECC
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRT---RIKALVKDKRNAMESFGT-YVESMAGDASNKKFLKTALRGVRSIICPS 170 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~---~V~~~~R~~~~~~~~~~~-~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~ 170 (305)
+++|.|.|+ |.+|..+++.|++.|+ +|++.+|++++....... ++.+. .+..++++++|+||.+.
T Consensus 3 ~~~I~iIG~-G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~gi~~~-------~~~~~~~~~aDvVilav 71 (280)
T 3tri_A 3 TSNITFIGG-GNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKCGVHTT-------QDNRQGALNADVVVLAV 71 (280)
T ss_dssp CSCEEEESC-SHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTTCCEEE-------SCHHHHHSSCSEEEECS
T ss_pred CCEEEEEcc-cHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHcCCEEe-------CChHHHHhcCCeEEEEe
Confidence 478999998 9999999999999998 999999998775443221 33321 12345678999999884
|
| >3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=96.19 E-value=0.0048 Score=56.34 Aligned_cols=90 Identities=12% Similarity=0.114 Sum_probs=56.9
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEECCcc--h
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG--F 173 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~g--~ 173 (305)
.++.+|||+|| |.+|...++.+...|.+|+++++++++......-+...+. .+.+.+. +++|+||.+.++ .
T Consensus 175 ~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~v~---~~~~~~~---~~~D~vid~~g~~~~ 247 (348)
T 3two_A 175 TKGTKVGVAGF-GGLGSMAVKYAVAMGAEVSVFARNEHKKQDALSMGVKHFY---TDPKQCK---EELDFIISTIPTHYD 247 (348)
T ss_dssp CTTCEEEEESC-SHHHHHHHHHHHHTTCEEEEECSSSTTHHHHHHTTCSEEE---SSGGGCC---SCEEEEEECCCSCCC
T ss_pred CCCCEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhcCCCeec---CCHHHHh---cCCCEEEECCCcHHH
Confidence 45789999997 9999999999889999999999888764322111222222 3333322 289999987443 2
Q ss_pred Hhhhhhh-cCCCEEEEEccc
Q 021928 174 ISNAGSL-KGVQHVILLSQL 192 (305)
Q Consensus 174 ~~~~a~~-~gv~~~V~iSS~ 192 (305)
+..+.+. ..-.++|.++..
T Consensus 248 ~~~~~~~l~~~G~iv~~G~~ 267 (348)
T 3two_A 248 LKDYLKLLTYNGDLALVGLP 267 (348)
T ss_dssp HHHHHTTEEEEEEEEECCCC
T ss_pred HHHHHHHHhcCCEEEEECCC
Confidence 3222221 112377777543
|
| >2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=96.19 E-value=0.0068 Score=57.86 Aligned_cols=84 Identities=14% Similarity=0.156 Sum_probs=58.4
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCC-C---eEEEEEcCcchh--hhhcCCCcEEeecCC--CCHHH-HHHHhcCccEEEE
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKR-T---RIKALVKDKRNA--MESFGTYVESMAGDA--SNKKF-LKTALRGVRSIIC 168 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g-~---~V~~~~R~~~~~--~~~~~~~v~~v~~D~--~d~~~-~~~~~~~~d~Vi~ 168 (305)
.++|+|.| .|.||+.+++.|++.. + +|++.+...... .+..+ +++...++ .|.++ +.+++++.|+||+
T Consensus 13 ~~rVlIIG-aGgVG~~va~lla~~~dv~~~~I~vaD~~~~~~~~~~~~g--~~~~~~~Vdadnv~~~l~aLl~~~DvVIN 89 (480)
T 2ph5_A 13 KNRFVILG-FGCVGQALMPLIFEKFDIKPSQVTIIAAEGTKVDVAQQYG--VSFKLQQITPQNYLEVIGSTLEENDFLID 89 (480)
T ss_dssp CSCEEEEC-CSHHHHHHHHHHHHHBCCCGGGEEEEESSCCSCCHHHHHT--CEEEECCCCTTTHHHHTGGGCCTTCEEEE
T ss_pred CCCEEEEC-cCHHHHHHHHHHHhCCCCceeEEEEeccchhhhhHHhhcC--CceeEEeccchhHHHHHHHHhcCCCEEEE
Confidence 47899999 5999999999999864 4 688887654432 22233 45555555 45434 5667877799998
Q ss_pred CCcc----hHhhhhhhcCCC
Q 021928 169 PSEG----FISNAGSLKGVQ 184 (305)
Q Consensus 169 ~~~g----~~~~~a~~~gv~ 184 (305)
++.. .+.++|.+.|+.
T Consensus 90 ~s~~~~~l~Im~acleaGv~ 109 (480)
T 2ph5_A 90 VSIGISSLALIILCNQKGAL 109 (480)
T ss_dssp CCSSSCHHHHHHHHHHHTCE
T ss_pred CCccccCHHHHHHHHHcCCC
Confidence 7432 377888899873
|
| >3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=96.18 E-value=0.0049 Score=53.98 Aligned_cols=66 Identities=12% Similarity=0.085 Sum_probs=46.7
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCe-EEEEEcCcchhhhhcCC-CcEEeecCCCCHHHHHHHhcCccEEEECCc
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTR-IKALVKDKRNAMESFGT-YVESMAGDASNKKFLKTALRGVRSIICPSE 171 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~-V~~~~R~~~~~~~~~~~-~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~ 171 (305)
+|+|.|.|+ |.+|+.+++.|.+.|++ |.+.+|++++....... ++.+. . ++.++++++|+||.+.+
T Consensus 10 ~m~i~iiG~-G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~g~~~~-~------~~~~~~~~~Dvvi~av~ 77 (266)
T 3d1l_A 10 DTPIVLIGA-GNLATNLAKALYRKGFRIVQVYSRTEESARELAQKVEAEYT-T------DLAEVNPYAKLYIVSLK 77 (266)
T ss_dssp GCCEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHTTCEEE-S------CGGGSCSCCSEEEECCC
T ss_pred CCeEEEEcC-CHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCcee-C------CHHHHhcCCCEEEEecC
Confidence 478999997 99999999999999998 78888887664332111 23321 1 12345678899988744
|
| >3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=96.15 E-value=0.0047 Score=55.72 Aligned_cols=75 Identities=20% Similarity=0.293 Sum_probs=53.4
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcch-hhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEECCcch
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-AMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEGF 173 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~-~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~g~ 173 (305)
.++.+|+|+||+|.+|...++.+...|.+|++++++... ....++. .. ..|..+.+.+.+.++++|+||.+.++.
T Consensus 151 ~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~~~~~~~~~lGa--~~-~i~~~~~~~~~~~~~g~D~v~d~~g~~ 226 (321)
T 3tqh_A 151 KQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTASKRNHAFLKALGA--EQ-CINYHEEDFLLAISTPVDAVIDLVGGD 226 (321)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHTC--SE-EEETTTSCHHHHCCSCEEEEEESSCHH
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEeccchHHHHHHcCC--CE-EEeCCCcchhhhhccCCCEEEECCCcH
Confidence 456899999999999999999999999999988754432 1112332 21 235555444667778999999886543
|
| >2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A* | Back alignment and structure |
|---|
Probab=96.14 E-value=0.0086 Score=54.51 Aligned_cols=90 Identities=16% Similarity=0.117 Sum_probs=57.8
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcchhhhhcCCCcEEeecCCCCH---HHHHHHh-cCccEEEECCc
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGTYVESMAGDASNK---KFLKTAL-RGVRSIICPSE 171 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~---~~~~~~~-~~~d~Vi~~~~ 171 (305)
++.+|||+|| |.+|...++.+...|+ +|+++++++++......- .. ...|..+. +.+.++. .++|+||.+.+
T Consensus 164 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~l-a~-~v~~~~~~~~~~~~~~~~~~g~D~vid~~g 240 (343)
T 2dq4_A 164 SGKSVLITGA-GPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPY-AD-RLVNPLEEDLLEVVRRVTGSGVEVLLEFSG 240 (343)
T ss_dssp TTSCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTTT-CS-EEECTTTSCHHHHHHHHHSSCEEEEEECSC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-HH-hccCcCccCHHHHHHHhcCCCCCEEEECCC
Confidence 5689999999 9999999999889999 999999987664322111 11 12344431 2233322 36899998855
Q ss_pred c--hHhh---hhhhcCCCEEEEEcc
Q 021928 172 G--FISN---AGSLKGVQHVILLSQ 191 (305)
Q Consensus 172 g--~~~~---~a~~~gv~~~V~iSS 191 (305)
+ .+.. ..+..| ++|.++.
T Consensus 241 ~~~~~~~~~~~l~~~G--~iv~~g~ 263 (343)
T 2dq4_A 241 NEAAIHQGLMALIPGG--EARILGI 263 (343)
T ss_dssp CHHHHHHHHHHEEEEE--EEEECCC
T ss_pred CHHHHHHHHHHHhcCC--EEEEEec
Confidence 4 2222 233333 7887765
|
| >3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579} | Back alignment and structure |
|---|
Probab=96.13 E-value=0.004 Score=54.09 Aligned_cols=65 Identities=11% Similarity=0.098 Sum_probs=47.8
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCC----eEEEEEcCcchhhhhcCC-CcEEeecCCCCHHHHHHHhcCccEEEECC
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRT----RIKALVKDKRNAMESFGT-YVESMAGDASNKKFLKTALRGVRSIICPS 170 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~----~V~~~~R~~~~~~~~~~~-~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~ 170 (305)
+|+|.|.|+ |.+|..+++.|++.|+ +|++..|++++....... ++.+ ..+ ..++++++|+||.+.
T Consensus 2 ~~~i~iIG~-G~mG~~~a~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~g~~~----~~~---~~e~~~~aDvVilav 71 (247)
T 3gt0_A 2 DKQIGFIGC-GNMGMAMIGGMINKNIVSSNQIICSDLNTANLKNASEKYGLTT----TTD---NNEVAKNADILILSI 71 (247)
T ss_dssp CCCEEEECC-SHHHHHHHHHHHHTTSSCGGGEEEECSCHHHHHHHHHHHCCEE----CSC---HHHHHHHCSEEEECS
T ss_pred CCeEEEECc-cHHHHHHHHHHHhCCCCCCCeEEEEeCCHHHHHHHHHHhCCEE----eCC---hHHHHHhCCEEEEEe
Confidence 478999995 9999999999999998 999999998765433211 2322 122 345567799999884
|
| >3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium} | Back alignment and structure |
|---|
Probab=96.13 E-value=0.0095 Score=51.33 Aligned_cols=71 Identities=15% Similarity=0.132 Sum_probs=54.1
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhh-hhc-CCCcEEeecCCCCHHHHHHHhcCccEEEECCc
Q 021928 95 PEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM-ESF-GTYVESMAGDASNKKFLKTALRGVRSIICPSE 171 (305)
Q Consensus 95 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~-~~~-~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~ 171 (305)
+..+++|||.|| |.+|...++.|++.|++|++++.+..... +.. ..+++++..++.+ ..+.++|.||.+++
T Consensus 28 ~L~gk~VLVVGg-G~va~~ka~~Ll~~GA~VtVvap~~~~~l~~l~~~~~i~~i~~~~~~-----~dL~~adLVIaAT~ 100 (223)
T 3dfz_A 28 DLKGRSVLVVGG-GTIATRRIKGFLQEGAAITVVAPTVSAEINEWEAKGQLRVKRKKVGE-----EDLLNVFFIVVATN 100 (223)
T ss_dssp CCTTCCEEEECC-SHHHHHHHHHHGGGCCCEEEECSSCCHHHHHHHHTTSCEEECSCCCG-----GGSSSCSEEEECCC
T ss_pred EcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHcCCcEEEECCCCH-----hHhCCCCEEEECCC
Confidence 345699999998 99999999999999999999987754322 221 2357888777754 23788999998744
|
| >3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=96.10 E-value=0.0059 Score=56.32 Aligned_cols=74 Identities=16% Similarity=0.172 Sum_probs=50.6
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhc--C------CCcEEeecCCCCHHHHHHHhcCccEEEE
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF--G------TYVESMAGDASNKKFLKTALRGVRSIIC 168 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~--~------~~v~~v~~D~~d~~~~~~~~~~~d~Vi~ 168 (305)
.+|+|.|.|+ |.+|..++..|++.|++|.+.+|++++..... + +++.. ...+.-..++.++++++|.||.
T Consensus 28 ~~mkI~VIGa-G~mG~alA~~La~~G~~V~l~~r~~~~~~~i~~~~~~~~~l~g~~l-~~~i~~t~d~~ea~~~aDvVil 105 (356)
T 3k96_A 28 FKHPIAILGA-GSWGTALALVLARKGQKVRLWSYESDHVDEMQAEGVNNRYLPNYPF-PETLKAYCDLKASLEGVTDILI 105 (356)
T ss_dssp CCSCEEEECC-SHHHHHHHHHHHTTTCCEEEECSCHHHHHHHHHHSSBTTTBTTCCC-CTTEEEESCHHHHHTTCCEEEE
T ss_pred cCCeEEEECc-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCCcccCCCCcc-CCCeEEECCHHHHHhcCCEEEE
Confidence 3579999997 99999999999999999999999976532211 1 11110 1111101235567889999998
Q ss_pred CCcc
Q 021928 169 PSEG 172 (305)
Q Consensus 169 ~~~g 172 (305)
+.+.
T Consensus 106 aVp~ 109 (356)
T 3k96_A 106 VVPS 109 (356)
T ss_dssp CCCH
T ss_pred CCCH
Confidence 8553
|
| >4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens} | Back alignment and structure |
|---|
Probab=96.10 E-value=0.015 Score=53.69 Aligned_cols=68 Identities=7% Similarity=-0.098 Sum_probs=47.8
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEECC
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS 170 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~ 170 (305)
+|+|.|.|. |.+|..+++.|++.|++|++..|++++.......++.. ..+.+.+.+..+..|+||.+.
T Consensus 22 ~mkIgiIGl-G~mG~~~A~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~----~~s~~e~~~~a~~~DvVi~~v 89 (358)
T 4e21_A 22 SMQIGMIGL-GRMGADMVRRLRKGGHECVVYDLNVNAVQALEREGIAG----ARSIEEFCAKLVKPRVVWLMV 89 (358)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCBC----CSSHHHHHHHSCSSCEEEECS
T ss_pred CCEEEEECc-hHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCCCEE----eCCHHHHHhcCCCCCEEEEeC
Confidence 489999995 99999999999999999999999987755443333321 223333333333349888773
|
| >1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=96.07 E-value=0.027 Score=51.33 Aligned_cols=92 Identities=13% Similarity=0.071 Sum_probs=59.7
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh--hcCCCcEEeecCCC----CHHHHHHHh-----cCcc
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME--SFGTYVESMAGDAS----NKKFLKTAL-----RGVR 164 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~--~~~~~v~~v~~D~~----d~~~~~~~~-----~~~d 164 (305)
.++++|||+|+ |.+|...++.+...|++|+++++++++... .++.. .+ .|.. ..+.+.+.. .++|
T Consensus 167 ~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~-~~--~~~~~~~~~~~~i~~~~~~~~g~g~D 242 (352)
T 1e3j_A 167 QLGTTVLVIGA-GPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKNCGAD-VT--LVVDPAKEEESSIIERIRSAIGDLPN 242 (352)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCS-EE--EECCTTTSCHHHHHHHHHHHSSSCCS
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhCCC-EE--EcCcccccHHHHHHHHhccccCCCCC
Confidence 35689999997 999999999888899999999988766332 23322 22 2333 245566555 3699
Q ss_pred EEEECCcch--Hhhhhhh-cCCCEEEEEcc
Q 021928 165 SIICPSEGF--ISNAGSL-KGVQHVILLSQ 191 (305)
Q Consensus 165 ~Vi~~~~g~--~~~~a~~-~gv~~~V~iSS 191 (305)
+||.+.++. +..+.+. ..-.++|.++.
T Consensus 243 ~vid~~g~~~~~~~~~~~l~~~G~iv~~G~ 272 (352)
T 1e3j_A 243 VTIDCSGNEKCITIGINITRTGGTLMLVGM 272 (352)
T ss_dssp EEEECSCCHHHHHHHHHHSCTTCEEEECSC
T ss_pred EEEECCCCHHHHHHHHHHHhcCCEEEEEec
Confidence 999885432 2232222 12247887764
|
| >2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.06 E-value=0.007 Score=54.43 Aligned_cols=66 Identities=3% Similarity=-0.068 Sum_probs=48.5
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEECCc
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE 171 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~ 171 (305)
.++|.|.|+ |.+|..+++.|.+.|++|++..|++++.......++.. ..+ ..++++++|+||.+.+
T Consensus 30 ~~~I~iIG~-G~mG~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~----~~~---~~~~~~~~DvVi~av~ 95 (316)
T 2uyy_A 30 DKKIGFLGL-GLMGSGIVSNLLKMGHTVTVWNRTAEKCDLFIQEGARL----GRT---PAEVVSTCDITFACVS 95 (316)
T ss_dssp SSCEEEECC-SHHHHHHHHHHHHTTCCEEEECSSGGGGHHHHHTTCEE----CSC---HHHHHHHCSEEEECCS
T ss_pred CCeEEEEcc-cHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHcCCEE----cCC---HHHHHhcCCEEEEeCC
Confidence 478999996 99999999999999999999999887654332222322 112 3455678899998854
|
| >3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A* | Back alignment and structure |
|---|
Probab=96.05 E-value=0.0082 Score=54.02 Aligned_cols=41 Identities=5% Similarity=-0.036 Sum_probs=35.9
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES 138 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~ 138 (305)
.|++|.+.|- |..|+.++++|++.||+|++..|++++....
T Consensus 2 ~M~kIgfIGl-G~MG~~mA~~L~~~G~~v~v~dr~~~~~~~l 42 (300)
T 3obb_A 2 HMKQIAFIGL-GHMGAPMATNLLKAGYLLNVFDLVQSAVDGL 42 (300)
T ss_dssp -CCEEEEECC-STTHHHHHHHHHHTTCEEEEECSSHHHHHHH
T ss_pred CcCEEEEeee-hHHHHHHHHHHHhCCCeEEEEcCCHHHHHHH
Confidence 4689999996 9999999999999999999999998875543
|
| >1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=96.03 E-value=0.0081 Score=54.24 Aligned_cols=90 Identities=13% Similarity=0.101 Sum_probs=54.1
Q ss_pred EEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh--hcCCCcEEeecCCCCH--HHHHHHh-cCccEEEECCcch-
Q 021928 100 AVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME--SFGTYVESMAGDASNK--KFLKTAL-RGVRSIICPSEGF- 173 (305)
Q Consensus 100 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~--~~~~~v~~v~~D~~d~--~~~~~~~-~~~d~Vi~~~~g~- 173 (305)
+|||+||+|.+|...++.+...|++|+++++++++... .++. +.+ .|..+. +.+.+.- .++|+||.+.++.
T Consensus 152 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~lGa--~~~-i~~~~~~~~~~~~~~~~~~d~vid~~g~~~ 228 (328)
T 1xa0_A 152 PVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRVLGA--KEV-LAREDVMAERIRPLDKQRWAAAVDPVGGRT 228 (328)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHHTTC--SEE-EECC---------CCSCCEEEEEECSTTTT
T ss_pred eEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCC--cEE-EecCCcHHHHHHHhcCCcccEEEECCcHHH
Confidence 79999999999999999999999999999998765322 2332 221 244432 1222222 3689999875433
Q ss_pred Hhhhhhhc-CCCEEEEEccc
Q 021928 174 ISNAGSLK-GVQHVILLSQL 192 (305)
Q Consensus 174 ~~~~a~~~-gv~~~V~iSS~ 192 (305)
+..+.+.. .-.++|.++..
T Consensus 229 ~~~~~~~l~~~G~~v~~G~~ 248 (328)
T 1xa0_A 229 LATVLSRMRYGGAVAVSGLT 248 (328)
T ss_dssp HHHHHHTEEEEEEEEECSCC
T ss_pred HHHHHHhhccCCEEEEEeec
Confidence 22222221 12377777643
|
| >2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A | Back alignment and structure |
|---|
Probab=96.02 E-value=0.015 Score=52.96 Aligned_cols=66 Identities=12% Similarity=-0.013 Sum_probs=48.6
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEECC
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS 170 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~ 170 (305)
..+++|.|.|. |.||+.+++.|...|++|++.+|++++.......++... + +.++++++|+|+.+.
T Consensus 153 l~g~~vgIIG~-G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~-----~---l~e~l~~aDvVi~~v 218 (330)
T 2gcg_A 153 LTQSTVGIIGL-GRIGQAIARRLKPFGVQRFLYTGRQPRPEEAAEFQAEFV-----S---TPELAAQSDFIVVAC 218 (330)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHGGGTCCEEEEESSSCCHHHHHTTTCEEC-----C---HHHHHHHCSEEEECC
T ss_pred CCCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCCcchhHHHhcCceeC-----C---HHHHHhhCCEEEEeC
Confidence 34689999997 999999999999999999999988754332222223321 2 456678899999773
|
| >3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp} | Back alignment and structure |
|---|
Probab=96.02 E-value=0.011 Score=53.24 Aligned_cols=66 Identities=6% Similarity=-0.128 Sum_probs=46.6
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCc--chhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEECC
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDK--RNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS 170 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~--~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~ 170 (305)
.+|+|.|.|. |.+|..+++.|++.|+ +|++..|++ ++.......++.. . ++..++++++|+||.+.
T Consensus 23 ~~~~I~iIG~-G~mG~~~A~~L~~~G~~~V~~~dr~~~~~~~~~~~~~g~~~----~---~~~~e~~~~aDvVi~~v 91 (312)
T 3qsg_A 23 NAMKLGFIGF-GEAASAIASGLRQAGAIDMAAYDAASAESWRPRAEELGVSC----K---ASVAEVAGECDVIFSLV 91 (312)
T ss_dssp --CEEEEECC-SHHHHHHHHHHHHHSCCEEEEECSSCHHHHHHHHHHTTCEE----C---SCHHHHHHHCSEEEECS
T ss_pred CCCEEEEECc-cHHHHHHHHHHHHCCCCeEEEEcCCCCHHHHHHHHHCCCEE----e---CCHHHHHhcCCEEEEec
Confidence 3589999996 9999999999999999 999999973 4332222222332 1 23455677899999873
|
| >2dwc_A PH0318, 433AA long hypothetical phosphoribosylglycinamide transferase; purine ribonucleotide biosynthesis; HET: ADP; 1.70A {Pyrococcus horikoshii} PDB: 2czg_A* | Back alignment and structure |
|---|
Probab=96.00 E-value=0.03 Score=52.49 Aligned_cols=70 Identities=14% Similarity=0.228 Sum_probs=54.5
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhc--CccEEEEC
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--GVRSIICP 169 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~--~~d~Vi~~ 169 (305)
++|+|||+|+ |.+|+.+++.+.+.|++|+++..++......... +.+..|+.|.+.+.++++ ++|+|+..
T Consensus 18 ~~~~ili~g~-g~~g~~~~~a~~~~G~~v~~v~~~~~~~~~~~ad--~~~~~~~~d~~~l~~~~~~~~~d~V~~~ 89 (433)
T 2dwc_A 18 SAQKILLLGS-GELGKEIAIEAQRLGVEVVAVDRYANAPAMQVAH--RSYVGNMMDKDFLWSVVEREKPDAIIPE 89 (433)
T ss_dssp TCCEEEEESC-SHHHHHHHHHHHHTTCEEEEEESSTTCHHHHHSS--EEEESCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECCCCChhhhhcc--eEEECCCCCHHHHHHHHHHcCCCEEEEC
Confidence 3579999997 7899999999999999999998776442222222 456778889888888775 78999865
|
| >1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1 | Back alignment and structure |
|---|
Probab=96.00 E-value=0.025 Score=50.25 Aligned_cols=88 Identities=14% Similarity=0.168 Sum_probs=59.1
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcch-----hhhh-----------------------cCCCc-EEe
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-----AMES-----------------------FGTYV-ESM 146 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~-----~~~~-----------------------~~~~v-~~v 146 (305)
..+++|||.|| |.+|...++.|++.|++|++++.+... .... ...++ +++
T Consensus 11 l~~k~VLVVGg-G~va~rka~~Ll~~Ga~VtViap~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~i 89 (274)
T 1kyq_A 11 LKDKRILLIGG-GEVGLTRLYKLMPTGCKLTLVSPDLHKSIIPKFGKFIQNKDQPDYREDAKRFINPNWDPTKNEIYEYI 89 (274)
T ss_dssp CTTCEEEEEEE-SHHHHHHHHHHGGGTCEEEEEEEEECTTHHHHHCGGGC-----------CEEECTTCCTTSCCCSEEE
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHhCCCEEEEEcCCCCcchhHHHHHHHhccccccccchhhcccccccccccCCeeEEE
Confidence 35699999998 999999999999999999998876431 1111 12345 777
Q ss_pred ecCCCCHHHHHHHhc------CccEEEECCcch-----Hhhhhhhc-CCCEEEEE
Q 021928 147 AGDASNKKFLKTALR------GVRSIICPSEGF-----ISNAGSLK-GVQHVILL 189 (305)
Q Consensus 147 ~~D~~d~~~~~~~~~------~~d~Vi~~~~g~-----~~~~a~~~-gv~~~V~i 189 (305)
..++.+ + .+. ++|.||.+.+.. +...|++. |++..|.+
T Consensus 90 ~~~~~~-~----dL~~l~~~~~adlViaat~d~~~n~~I~~~Ar~~f~~~i~VNv 139 (274)
T 1kyq_A 90 RSDFKD-E----YLDLENENDAWYIIMTCIPDHPESARIYHLCKERFGKQQLVNV 139 (274)
T ss_dssp CSSCCG-G----GGCCSSTTCCEEEEEECCSCHHHHHHHHHHHHHHHCTTSEEEE
T ss_pred cCCCCH-H----HHhhcccCCCeEEEEEcCCChHHHHHHHHHHHHhcCCCcEEEE
Confidence 776654 2 244 889999875432 44455554 55545543
|
| >4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A* | Back alignment and structure |
|---|
Probab=95.99 E-value=0.012 Score=54.30 Aligned_cols=88 Identities=15% Similarity=0.035 Sum_probs=52.3
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCC-CeEEEEEcCcc--h-hhhhcC-----------CCcEEeecCCCCHHHHHHHhcC
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKR--N-AMESFG-----------TYVESMAGDASNKKFLKTALRG 162 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~R~~~--~-~~~~~~-----------~~v~~v~~D~~d~~~~~~~~~~ 162 (305)
+.+|.|.||||++|+++++.|.+.. .++..+..... + ..+.++ ....+. ++ +.+ .+.+
T Consensus 7 ~~kVaIvGATGyvG~eLlrlL~~hP~~el~~l~S~~saGk~~~~~~p~~~~~~~~~~~~~~~v~--~~-~~~----~~~~ 79 (359)
T 4dpk_A 7 TLKAAILGATGLVGIEYVRMLSNHPYIKPAYLAGKGSVGKPYGEVVRWQTVGQVPKEIADMEIK--PT-DPK----LMDD 79 (359)
T ss_dssp CEEEEETTTTSTTHHHHHHHHTTCSSEEEEEEEESTTTTSBHHHHCCCCSSSCCCHHHHTCBCE--EC-CGG----GCTT
T ss_pred CCeEEEECCCCHHHHHHHHHHHhCCCceEEEEECchhcCCChhHhcccccccccccccccceEE--eC-CHH----HhcC
Confidence 4689999999999999999887765 36766643322 2 211111 011111 11 212 3579
Q ss_pred ccEEEECCcch----HhhhhhhcCCCEEEEEcccc
Q 021928 163 VRSIICPSEGF----ISNAGSLKGVQHVILLSQLS 193 (305)
Q Consensus 163 ~d~Vi~~~~g~----~~~~a~~~gv~~~V~iSS~~ 193 (305)
+|+||.+.+.. ....+.+.|+ ++|-+|+..
T Consensus 80 vDvvf~a~p~~~s~~~a~~~~~~G~-~vIDlSa~~ 113 (359)
T 4dpk_A 80 VDIIFSPLPQGAAGPVEEQFAKEGF-PVISNSPDH 113 (359)
T ss_dssp CCEEEECCCTTTHHHHHHHHHHTTC-EEEECSSTT
T ss_pred CCEEEECCChHHHHHHHHHHHHCCC-EEEEcCCCc
Confidence 99999986543 3334455676 566667653
|
| >4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A* | Back alignment and structure |
|---|
Probab=95.99 E-value=0.012 Score=54.30 Aligned_cols=88 Identities=15% Similarity=0.035 Sum_probs=52.3
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCC-CeEEEEEcCcc--h-hhhhcC-----------CCcEEeecCCCCHHHHHHHhcC
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKR--N-AMESFG-----------TYVESMAGDASNKKFLKTALRG 162 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~R~~~--~-~~~~~~-----------~~v~~v~~D~~d~~~~~~~~~~ 162 (305)
+.+|.|.||||++|+++++.|.+.. .++..+..... + ..+.++ ....+. ++ +.+ .+.+
T Consensus 7 ~~kVaIvGATGyvG~eLlrlL~~hP~~el~~l~S~~saGk~~~~~~p~~~~~~~~~~~~~~~v~--~~-~~~----~~~~ 79 (359)
T 4dpl_A 7 TLKAAILGATGLVGIEYVRMLSNHPYIKPAYLAGKGSVGKPYGEVVRWQTVGQVPKEIADMEIK--PT-DPK----LMDD 79 (359)
T ss_dssp CEEEEETTTTSTTHHHHHHHHTTCSSEEEEEEEESTTTTSBHHHHCCCCSSSCCCHHHHTCBCE--EC-CGG----GCTT
T ss_pred CCeEEEECCCCHHHHHHHHHHHhCCCceEEEEECchhcCCChhHhcccccccccccccccceEE--eC-CHH----HhcC
Confidence 4689999999999999999887765 36766643322 2 211111 011111 11 212 3579
Q ss_pred ccEEEECCcch----HhhhhhhcCCCEEEEEcccc
Q 021928 163 VRSIICPSEGF----ISNAGSLKGVQHVILLSQLS 193 (305)
Q Consensus 163 ~d~Vi~~~~g~----~~~~a~~~gv~~~V~iSS~~ 193 (305)
+|+||.+.+.. ....+.+.|+ ++|-+|+..
T Consensus 80 vDvvf~a~p~~~s~~~a~~~~~~G~-~vIDlSa~~ 113 (359)
T 4dpl_A 80 VDIIFSPLPQGAAGPVEEQFAKEGF-PVISNSPDH 113 (359)
T ss_dssp CCEEEECCCTTTHHHHHHHHHHTTC-EEEECSSTT
T ss_pred CCEEEECCChHHHHHHHHHHHHCCC-EEEEcCCCc
Confidence 99999986543 3334455676 566667653
|
| >1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=95.98 E-value=0.0054 Score=54.38 Aligned_cols=65 Identities=8% Similarity=-0.092 Sum_probs=45.5
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEECCc
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE 171 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~ 171 (305)
+|+|.|.|+ |.+|+.+++.|.+.|++|++.. ++++.......++.. . .++.++++++|+||.+.+
T Consensus 3 ~m~i~iiG~-G~~G~~~a~~l~~~g~~V~~~~-~~~~~~~~~~~g~~~----~---~~~~~~~~~~D~vi~~vp 67 (295)
T 1yb4_A 3 AMKLGFIGL-GIMGSPMAINLARAGHQLHVTT-IGPVADELLSLGAVN----V---ETARQVTEFADIIFIMVP 67 (295)
T ss_dssp -CEEEECCC-STTHHHHHHHHHHTTCEEEECC-SSCCCHHHHTTTCBC----C---SSHHHHHHTCSEEEECCS
T ss_pred CCEEEEEcc-CHHHHHHHHHHHhCCCEEEEEc-CHHHHHHHHHcCCcc----c---CCHHHHHhcCCEEEEECC
Confidence 479999995 9999999999999999998887 665543322222211 1 224456678899998753
|
| >4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A* | Back alignment and structure |
|---|
Probab=95.97 E-value=0.0023 Score=56.93 Aligned_cols=37 Identities=11% Similarity=0.065 Sum_probs=33.6
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchh
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA 135 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~ 135 (305)
.++|.|.|+ |.+|+.+++.|++.|++|++.+|+++..
T Consensus 4 ~~kV~VIGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~ 40 (283)
T 4e12_A 4 ITNVTVLGT-GVLGSQIAFQTAFHGFAVTAYDINTDAL 40 (283)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHH
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEeCCHHHH
Confidence 479999987 9999999999999999999999998663
|
| >3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A* | Back alignment and structure |
|---|
Probab=95.96 E-value=0.0088 Score=54.13 Aligned_cols=68 Identities=10% Similarity=-0.006 Sum_probs=49.1
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCC--eEEEEEcCcchhhhhcCCCcE-EeecCCCCHHHHHH-HhcCccEEEECCc
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRT--RIKALVKDKRNAMESFGTYVE-SMAGDASNKKFLKT-ALRGVRSIICPSE 171 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~R~~~~~~~~~~~~v~-~v~~D~~d~~~~~~-~~~~~d~Vi~~~~ 171 (305)
+.++|.|.| .|.+|..+++.|.+.|+ +|++.+|++++.......++. ....| +.+ +++++|+||.+.+
T Consensus 32 ~~~kI~IIG-~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~G~~~~~~~~------~~~~~~~~aDvVilavp 103 (314)
T 3ggo_A 32 SMQNVLIVG-VGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTS------IAKVEDFSPDFVMLSSP 103 (314)
T ss_dssp SCSEEEEES-CSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESC------TTGGGGGCCSEEEECSC
T ss_pred CCCEEEEEe-eCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHCCCcchhcCC------HHHHhhccCCEEEEeCC
Confidence 358999999 59999999999999999 999999998764432221221 11112 234 6789999998844
|
| >4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis} | Back alignment and structure |
|---|
Probab=95.95 E-value=0.0055 Score=54.46 Aligned_cols=35 Identities=9% Similarity=0.246 Sum_probs=29.1
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhC-CCeEEEE-EcCc
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVK-RTRIKAL-VKDK 132 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~-g~~V~~~-~R~~ 132 (305)
+++|.|.||+|.+|+.+++.+.+. +++++++ +|++
T Consensus 7 mikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~ 43 (272)
T 4f3y_A 7 SMKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTG 43 (272)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCTT
T ss_pred ccEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEecC
Confidence 579999999999999999999875 5788875 5543
|
| >2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A* | Back alignment and structure |
|---|
Probab=95.94 E-value=0.012 Score=47.08 Aligned_cols=81 Identities=7% Similarity=0.022 Sum_probs=52.3
Q ss_pred CCEEEEEcCC---ChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEECCcc-h
Q 021928 98 RDAVLVTDGD---SDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG-F 173 (305)
Q Consensus 98 ~~~vlVtGat---G~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~g-~ 173 (305)
+++|.|.|++ |.+|..+++.|.+.|++|+.+ ++.. .+.. ++.++ .++.++-+.+|.++.+.+. .
T Consensus 22 p~~iaVVGas~~~g~~G~~~~~~l~~~G~~v~~V--np~~-~~i~--G~~~y-------~sl~~l~~~vDlvvi~vp~~~ 89 (144)
T 2d59_A 22 YKKIALVGASPKPERDANIVMKYLLEHGYDVYPV--NPKY-EEVL--GRKCY-------PSVLDIPDKIEVVDLFVKPKL 89 (144)
T ss_dssp CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEE--CTTC-SEET--TEECB-------SSGGGCSSCCSEEEECSCHHH
T ss_pred CCEEEEEccCCCCCchHHHHHHHHHHCCCEEEEE--CCCC-CeEC--Ceecc-------CCHHHcCCCCCEEEEEeCHHH
Confidence 5899999998 899999999999999986655 3332 1111 12211 1222333478999987442 2
Q ss_pred ---HhhhhhhcCCCEEEEEc
Q 021928 174 ---ISNAGSLKGVQHVILLS 190 (305)
Q Consensus 174 ---~~~~a~~~gv~~~V~iS 190 (305)
+.+.+.+.|++.+++.+
T Consensus 90 ~~~vv~~~~~~gi~~i~~~~ 109 (144)
T 2d59_A 90 TMEYVEQAIKKGAKVVWFQY 109 (144)
T ss_dssp HHHHHHHHHHHTCSEEEECT
T ss_pred HHHHHHHHHHcCCCEEEECC
Confidence 34445668898776543
|
| >2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=95.93 E-value=0.026 Score=52.51 Aligned_cols=73 Identities=10% Similarity=0.053 Sum_probs=51.3
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcchhhhhcCCCcEEeecCCCC----HHHHHHHhc--CccEEEE
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGTYVESMAGDASN----KKFLKTALR--GVRSIIC 168 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~v~~v~~D~~d----~~~~~~~~~--~~d~Vi~ 168 (305)
.++.+|||+|+ |.+|...++.+...|. +|+++++++++......-+.+++ |..+ .+.+.+... ++|+||.
T Consensus 184 ~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~i--~~~~~~~~~~~~~~~~~g~g~Dvvid 260 (398)
T 2dph_A 184 KPGSHVYIAGA-GPVGRCAAAGARLLGAACVIVGDQNPERLKLLSDAGFETI--DLRNSAPLRDQIDQILGKPEVDCGVD 260 (398)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHTTTCEEE--ETTSSSCHHHHHHHHHSSSCEEEEEE
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCcEE--cCCCcchHHHHHHHHhCCCCCCEEEE
Confidence 35689999997 9999999988888898 89999998876433222234433 4433 345555544 5899998
Q ss_pred CCc
Q 021928 169 PSE 171 (305)
Q Consensus 169 ~~~ 171 (305)
+.+
T Consensus 261 ~~g 263 (398)
T 2dph_A 261 AVG 263 (398)
T ss_dssp CSC
T ss_pred CCC
Confidence 744
|
| >1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=95.93 E-value=0.038 Score=50.82 Aligned_cols=93 Identities=15% Similarity=0.085 Sum_probs=58.6
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcchhhh--hcCCCcEEeecCCC----C-HHHHHHHh-cCccEE
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAME--SFGTYVESMAGDAS----N-KKFLKTAL-RGVRSI 166 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~--~~~~~v~~v~~D~~----d-~~~~~~~~-~~~d~V 166 (305)
.++.+|||+|+ |.+|...++.+...|. +|+++++++++... .++ ...+ .|.. + .+.+.++. .++|+|
T Consensus 191 ~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lG--a~~v-i~~~~~~~~~~~~~~~~~~~g~D~v 266 (374)
T 1cdo_A 191 EPGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFG--ATDF-VNPNDHSEPISQVLSKMTNGGVDFS 266 (374)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTT--CCEE-ECGGGCSSCHHHHHHHHHTSCBSEE
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhC--CceE-EeccccchhHHHHHHHHhCCCCCEE
Confidence 35689999996 9999999998889998 79999888776432 233 2221 2333 2 23343333 369999
Q ss_pred EECCcc--hHhhhhhhcC-C-CEEEEEccc
Q 021928 167 ICPSEG--FISNAGSLKG-V-QHVILLSQL 192 (305)
Q Consensus 167 i~~~~g--~~~~~a~~~g-v-~~~V~iSS~ 192 (305)
|.+.++ .+..+.+... - .++|.++..
T Consensus 267 id~~g~~~~~~~~~~~l~~~~G~iv~~G~~ 296 (374)
T 1cdo_A 267 LECVGNVGVMRNALESCLKGWGVSVLVGWT 296 (374)
T ss_dssp EECSCCHHHHHHHHHTBCTTTCEEEECSCC
T ss_pred EECCCCHHHHHHHHHHhhcCCcEEEEEcCC
Confidence 988543 2333333222 2 488877653
|
| >2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A* | Back alignment and structure |
|---|
Probab=95.90 E-value=0.0042 Score=54.91 Aligned_cols=64 Identities=11% Similarity=-0.020 Sum_probs=45.2
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEECCc
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE 171 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~ 171 (305)
||+|.|.|+ |.+|..+++.|.+ |++|++..|++++.......++... + ..++++++|+||.+.+
T Consensus 1 M~~i~iiG~-G~~G~~~a~~l~~-g~~V~~~~~~~~~~~~~~~~g~~~~--~------~~~~~~~~D~vi~~v~ 64 (289)
T 2cvz_A 1 MEKVAFIGL-GAMGYPMAGHLAR-RFPTLVWNRTFEKALRHQEEFGSEA--V------PLERVAEARVIFTCLP 64 (289)
T ss_dssp -CCEEEECC-STTHHHHHHHHHT-TSCEEEECSSTHHHHHHHHHHCCEE--C------CGGGGGGCSEEEECCS
T ss_pred CCeEEEEcc-cHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHHCCCccc--C------HHHHHhCCCEEEEeCC
Confidence 368999986 9999999999999 9999999998876433211122221 1 2345678899888744
|
| >3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=95.87 E-value=0.049 Score=50.71 Aligned_cols=93 Identities=11% Similarity=0.078 Sum_probs=59.1
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcchhh--hhcCCCcEEeecCCCC---HHHHHHHhc--CccEEE
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAM--ESFGTYVESMAGDASN---KKFLKTALR--GVRSII 167 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~--~~~~~~v~~v~~D~~d---~~~~~~~~~--~~d~Vi 167 (305)
.++.+|||+|| |.+|...++.+...|. +|+++++++++.. ..++.. .+ .|..+ .+.+.++.. ++|+||
T Consensus 212 ~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~-~v--i~~~~~~~~~~i~~~t~g~g~D~vi 287 (404)
T 3ip1_A 212 RPGDNVVILGG-GPIGLAAVAILKHAGASKVILSEPSEVRRNLAKELGAD-HV--IDPTKENFVEAVLDYTNGLGAKLFL 287 (404)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCS-EE--ECTTTSCHHHHHHHHTTTCCCSEEE
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCC-EE--EcCCCCCHHHHHHHHhCCCCCCEEE
Confidence 45689999998 9999999998889999 8999888876632 223321 22 23332 344555543 589999
Q ss_pred ECCcch--Hh----hhh-hh-cCCCEEEEEccc
Q 021928 168 CPSEGF--IS----NAG-SL-KGVQHVILLSQL 192 (305)
Q Consensus 168 ~~~~g~--~~----~~a-~~-~gv~~~V~iSS~ 192 (305)
.+.++. .. ++. +. ..-.++|.++..
T Consensus 288 d~~g~~~~~~~~~~~~l~~~~~~~G~iv~~G~~ 320 (404)
T 3ip1_A 288 EATGVPQLVWPQIEEVIWRARGINATVAIVARA 320 (404)
T ss_dssp ECSSCHHHHHHHHHHHHHHCSCCCCEEEECSCC
T ss_pred ECCCCcHHHHHHHHHHHHhccCCCcEEEEeCCC
Confidence 885543 22 222 00 223478877653
|
| >3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A | Back alignment and structure |
|---|
Probab=95.86 E-value=0.032 Score=51.32 Aligned_cols=88 Identities=11% Similarity=0.121 Sum_probs=60.9
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcch-------------------h------hhhcCC--CcEEeec
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRN-------------------A------MESFGT--YVESMAG 148 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~-------------------~------~~~~~~--~v~~v~~ 148 (305)
...+|+|.|+ |++|+++++.|+..|. ++.+++++.-. . .....+ .++.+..
T Consensus 117 ~~~~VlvvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~~~ 195 (353)
T 3h5n_A 117 KNAKVVILGC-GGIGNHVSVILATSGIGEIILIDNDQIENTNLTRQVLFSEDDVGKNKTEVIKRELLKRNSEISVSEIAL 195 (353)
T ss_dssp HTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEEEC
T ss_pred hCCeEEEECC-CHHHHHHHHHHHhCCCCeEEEECCCcCcccccccccCCChHHCCChHHHHHHHHHHHHCCCCeEEEeec
Confidence 3589999998 8999999999999996 78888776311 0 001122 4556667
Q ss_pred CCCCHHHHHHHhcCccEEEECCcc------hHhhhhhhcCCCEE
Q 021928 149 DASNKKFLKTALRGVRSIICPSEG------FISNAGSLKGVQHV 186 (305)
Q Consensus 149 D~~d~~~~~~~~~~~d~Vi~~~~g------~~~~~a~~~gv~~~ 186 (305)
++.+...+.. ++++|.||.+... .+.+++.+.+++.+
T Consensus 196 ~i~~~~~~~~-~~~~DlVvd~~Dn~~~~r~~ln~~c~~~~~p~i 238 (353)
T 3h5n_A 196 NINDYTDLHK-VPEADIWVVSADHPFNLINWVNKYCVRANQPYI 238 (353)
T ss_dssp CCCSGGGGGG-SCCCSEEEECCCCSTTHHHHHHHHHHHTTCCEE
T ss_pred ccCchhhhhH-hccCCEEEEecCChHHHHHHHHHHHHHhCCCEE
Confidence 7766554666 8999999987332 14466778887633
|
| >3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens} | Back alignment and structure |
|---|
Probab=95.85 E-value=0.024 Score=50.96 Aligned_cols=34 Identities=9% Similarity=0.086 Sum_probs=30.5
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCc
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK 132 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 132 (305)
+|+|+|.|+ |.+|..++..|.+.|++|.++.|++
T Consensus 2 ~mkI~IiGa-GaiG~~~a~~L~~~g~~V~~~~r~~ 35 (312)
T 3hn2_A 2 SLRIAIVGA-GALGLYYGALLQRSGEDVHFLLRRD 35 (312)
T ss_dssp --CEEEECC-STTHHHHHHHHHHTSCCEEEECSTT
T ss_pred CCEEEEECc-CHHHHHHHHHHHHCCCeEEEEEcCc
Confidence 478999987 9999999999999999999999986
|
| >3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=95.84 E-value=0.015 Score=53.35 Aligned_cols=69 Identities=12% Similarity=0.080 Sum_probs=50.4
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCH-HHHHHHhcCccEEEECCc
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNK-KFLKTALRGVRSIICPSE 171 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~-~~~~~~~~~~d~Vi~~~~ 171 (305)
.++|.|.|. |.+|..+++.|.+.|++|++.+|+++........++.. ..+. +.+..+.+++|.||.+.+
T Consensus 8 ~~kIgIIG~-G~mG~slA~~L~~~G~~V~~~dr~~~~~~~a~~~G~~~----~~~~~e~~~~a~~~aDlVilavP 77 (341)
T 3ktd_A 8 SRPVCILGL-GLIGGSLLRDLHAANHSVFGYNRSRSGAKSAVDEGFDV----SADLEATLQRAAAEDALIVLAVP 77 (341)
T ss_dssp SSCEEEECC-SHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHTTCCE----ESCHHHHHHHHHHTTCEEEECSC
T ss_pred CCEEEEEee-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCee----eCCHHHHHHhcccCCCEEEEeCC
Confidence 478999995 99999999999999999999999987644332223322 1233 344556678899998854
|
| >1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A* | Back alignment and structure |
|---|
Probab=95.82 E-value=0.022 Score=51.70 Aligned_cols=77 Identities=8% Similarity=0.014 Sum_probs=54.3
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh---cCCCcE-EeecCCCCHHHHHHHhcCccEEEECC
Q 021928 95 PEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVE-SMAGDASNKKFLKTALRGVRSIICPS 170 (305)
Q Consensus 95 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~~~~v~-~v~~D~~d~~~~~~~~~~~d~Vi~~~ 170 (305)
+..+++++|.|++..+|+.+++.|+..|.+|+++.|+..+..+. +..... ......++.+++.+.++.+|+||.+.
T Consensus 174 ~l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~~ra~~la~~~~~~t~~~~t~~~~L~e~l~~ADIVIsAt 253 (320)
T 1edz_A 174 RLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLKLNKHHVEDLGEYSEDLLKKCSLDSDVVITGV 253 (320)
T ss_dssp TTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSSCCCCEEEEEEECCHHHHHHHHHHCSEEEECC
T ss_pred CCCCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHHHHhHHHHHhhhcccccccccccHhHHHHHhccCCEEEECC
Confidence 34679999999988899999999999999999998875432211 111111 11111134578899999999999984
Q ss_pred c
Q 021928 171 E 171 (305)
Q Consensus 171 ~ 171 (305)
+
T Consensus 254 g 254 (320)
T 1edz_A 254 P 254 (320)
T ss_dssp C
T ss_pred C
Confidence 3
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 305 | ||||
| d1hdoa_ | 205 | c.2.1.2 (A:) Biliverdin IX beta reductase {Human ( | 3e-09 | |
| d2q46a1 | 252 | c.2.1.2 (A:2-253) Hypothetical protein At5g02240 ( | 5e-05 |
| >d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 205 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Biliverdin IX beta reductase species: Human (Homo sapiens) [TaxId: 9606]
Score = 53.9 bits (128), Expect = 3e-09
Identities = 22/187 (11%), Positives = 49/187 (26%), Gaps = 16/187 (8%)
Query: 101 VLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTAL 160
+ + G + + + LV+D + GD + +
Sbjct: 6 IAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAADVDKTV 65
Query: 161 RGVRSIIC------PSEGFISN---------AGSLKGVQHVILLSQLSVYRGSGGIQALM 205
G ++I A GV V+ + + + +
Sbjct: 66 AGQDAVIVLLGTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTKVPPRL 125
Query: 206 KGNARKLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFI 265
+ +L SG+ Y + + + P +G + +SK D
Sbjct: 126 QAVTDDHIRM-HKVLRESGLKYVAVMPPHIGDQPLTGAYTVTLDGRGPSRVISKHDLGHF 184
Query: 266 CVEALES 272
+ L +
Sbjct: 185 MLRCLTT 191
|
| >d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 252 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein At5g02240 (T7H20 290) species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 41.7 bits (96), Expect = 5e-05
Identities = 21/85 (24%), Positives = 37/85 (43%), Gaps = 8/85 (9%)
Query: 226 PYTIIRTGVLQNTPGGKQGFQFEEG----CAANGSLSKEDAAFICVEALESIPQTGLIFE 281
PYTIIR G L + GG + + ++ + D A +C++AL F+
Sbjct: 167 PYTIIRAGGLLDKEGGVRELLVGKDDELLQTDTKTVPRADVAEVCIQALLFEEAKNKAFD 226
Query: 282 VVNGEE----KVSDWKKCFSRLMEK 302
+ + E D+K FS++ +
Sbjct: 227 LGSKPEGTSTPTKDFKALFSQVTSR 251
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 305 | |||
| d1hdoa_ | 205 | Biliverdin IX beta reductase {Human (Homo sapiens) | 99.97 | |
| d2q46a1 | 252 | Hypothetical protein At5g02240 (T7H20_290) {Thale | 99.94 | |
| d1qyda_ | 312 | Pinoresinol-lariciresinol reductase {Giant arborvi | 99.91 | |
| d2c5aa1 | 363 | GDP-mannose-3', 5'-epimerase {Thale cress (Arabido | 99.9 | |
| d1qyca_ | 307 | Phenylcoumaran benzylic ether reductase {Loblolly | 99.9 | |
| d1db3a_ | 357 | GDP-mannose 4,6-dehydratase {Escherichia coli [Tax | 99.89 | |
| d2bkaa1 | 232 | TAT-interacting protein TIP30 {Human (Homo sapiens | 99.89 | |
| d1xgka_ | 350 | Negative transcriptional regulator NmrA {Aspergill | 99.88 | |
| d1udca_ | 338 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.87 | |
| d2b69a1 | 312 | UDP-glucuronate decarboxylase 1 {Human (Homo sapie | 99.87 | |
| d1sb8a_ | 341 | UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo | 99.87 | |
| d1r6da_ | 322 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces | 99.87 | |
| d1kewa_ | 361 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 99.86 | |
| d2blla1 | 342 | Polymyxin resistance protein ArnA (PrmI) {Escheric | 99.86 | |
| d1oc2a_ | 346 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 99.85 | |
| d1y1pa1 | 342 | Aldehyde reductase II {Sporobolomyces salmonicolor | 99.84 | |
| d1z45a2 | 347 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.84 | |
| d1rpna_ | 321 | GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos | 99.84 | |
| d1ek6a_ | 346 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.84 | |
| d1i24a_ | 393 | Sulfolipid biosynthesis protein SQD1 {Thale cress | 99.82 | |
| d1t2aa_ | 347 | GDP-mannose 4,6-dehydratase {Human (Homo sapiens) | 99.81 | |
| d1gy8a_ | 383 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.81 | |
| d2a35a1 | 212 | Hypothetical protein PA4017 {Pseudomonas aeruginos | 99.8 | |
| d1vl0a_ | 281 | DTDP-4-dehydrorhamnose reductase RfbD {Clostridium | 99.79 | |
| d1n7ha_ | 339 | GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop | 99.79 | |
| d1orra_ | 338 | CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: | 99.79 | |
| d1e6ua_ | 315 | GDP-4-keto-6-deoxy-d-mannose epimerase/reductase ( | 99.77 | |
| d1nffa_ | 244 | Putative oxidoreductase Rv2002 {Mycobacterium tube | 99.74 | |
| d1q7ba_ | 243 | beta-keto acyl carrier protein reductase {Escheric | 99.72 | |
| d2ew8a1 | 247 | (s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb | 99.72 | |
| d2c07a1 | 251 | beta-keto acyl carrier protein reductase {Malaria | 99.72 | |
| d1hdca_ | 254 | 3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre | 99.72 | |
| d1pr9a_ | 244 | Carbonyl reductase {Human (Homo sapiens) [TaxId: 9 | 99.71 | |
| d1rkxa_ | 356 | CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc | 99.71 | |
| d1k2wa_ | 256 | Sorbitol dehydrogenase {Rhodobacter sphaeroides [T | 99.7 | |
| d2d1ya1 | 248 | Hypothetical protein TTHA0369 {Thermus thermophilu | 99.7 | |
| d1cyda_ | 242 | Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1 | 99.7 | |
| d1x1ta1 | 260 | D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas | 99.69 | |
| d1uzma1 | 237 | beta-keto acyl carrier protein reductase {Mycobact | 99.69 | |
| d1zk4a1 | 251 | R-specific alcohol dehydrogenase {Lactobacillus br | 99.69 | |
| d1fmca_ | 255 | 7-alpha-hydroxysteroid dehydrogenase {Escherichia | 99.69 | |
| d1ulsa_ | 242 | beta-keto acyl carrier protein reductase {Thermus | 99.69 | |
| d1n2sa_ | 298 | dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S | 99.69 | |
| d1vl8a_ | 251 | Gluconate 5-dehydrogenase {Thermotoga maritima [Ta | 99.69 | |
| d1ae1a_ | 258 | Tropinone reductase {Jimsonweed (Datura stramonium | 99.68 | |
| d1geea_ | 261 | Glucose dehydrogenase {Bacillus megaterium [TaxId: | 99.67 | |
| d2bd0a1 | 240 | Bacterial sepiapterin reductase {Chlorobium tepidu | 99.67 | |
| d1gega_ | 255 | meso-2,3-butanediol dehydrogenase {Klebsiella pneu | 99.67 | |
| d1iy8a_ | 258 | Levodione reductase {Corynebacterium aquaticum [Ta | 99.67 | |
| d1xq1a_ | 259 | Tropinone reductase {Thale cress (Arabidopsis thal | 99.67 | |
| d2gdza1 | 254 | 15-hydroxyprostaglandin dehydrogenase, PGDH {Human | 99.66 | |
| d1o5ia_ | 234 | beta-keto acyl carrier protein reductase {Thermoto | 99.65 | |
| d1ydea1 | 250 | Retinal dehydrogenase/reductase 3 {Human (Homo sap | 99.65 | |
| d2bgka1 | 268 | Rhizome secoisolariciresinol dehydrogenase {Mayapp | 99.65 | |
| d1edoa_ | 244 | beta-keto acyl carrier protein reductase {Oil seed | 99.65 | |
| d2ae2a_ | 259 | Tropinone reductase {Jimsonweed (Datura stramonium | 99.65 | |
| d1zema1 | 260 | Xylitol dehydrogenase {Gluconobacter oxydans [TaxI | 99.64 | |
| d1hxha_ | 253 | 3beta/17beta hydroxysteroid dehydrogenase {Comamon | 99.64 | |
| d1yb1a_ | 244 | 17-beta-hydroxysteroid dehydrogenase type XI {Huma | 99.63 | |
| d2rhca1 | 257 | beta-keto acyl carrier protein reductase {Streptom | 99.63 | |
| d2fr1a1 | 259 | Erythromycin synthase, eryAI, 1st ketoreductase mo | 99.63 | |
| d1w6ua_ | 294 | 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H | 99.62 | |
| d1spxa_ | 264 | Glucose dehydrogenase (5l265) {Nematode (Caenorhab | 99.62 | |
| d1yxma1 | 297 | Peroxisomal trans 2-enoyl CoA reductase {Human (Ho | 99.59 | |
| d2a4ka1 | 241 | beta-keto acyl carrier protein reductase {Thermus | 99.59 | |
| d1xkqa_ | 272 | Hypothetical protein R05D8.7 {Caenorhabditis elega | 99.59 | |
| d1ulua_ | 256 | Enoyl-ACP reductase {Thermus thermophilus [TaxId: | 99.58 | |
| d1xhla_ | 274 | Hypothetical protein F25D1.5 {Caenorhabditis elega | 99.58 | |
| d1sbya1 | 254 | Drosophila alcohol dehydrogenase {Fly (Drosophila | 99.58 | |
| d1xg5a_ | 257 | Putative dehydrogenase ARPG836 (MGC4172) {Human (H | 99.58 | |
| d1bdba_ | 276 | Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps | 99.58 | |
| d1h5qa_ | 260 | Mannitol dehydrogenase {Mushroom (Agaricus bisporu | 99.57 | |
| d2ag5a1 | 245 | Dehydrogenase/reductase SDR family member 6, DHRS6 | 99.54 | |
| d1ja9a_ | 259 | 1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl | 99.54 | |
| d1zmta1 | 252 | Halohydrin dehalogenase HheC {Agrobacterium tumefa | 99.54 | |
| d1eq2a_ | 307 | ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric | 99.54 | |
| d1gz6a_ | 302 | (3R)-hydroxyacyl-CoA dehydrogenase domain of estra | 99.53 | |
| d1snya_ | 248 | Carbonyl reductase sniffer {Fruit fly (Drosophila | 99.52 | |
| d2o23a1 | 248 | Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho | 99.52 | |
| d1jtva_ | 285 | Human estrogenic 17beta-hydroxysteroid dehydrogena | 99.51 | |
| d1g0oa_ | 272 | 1,3,8-trihydroxynaphtalene reductase (THNR, naphto | 99.51 | |
| d1uaya_ | 241 | Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t | 99.48 | |
| d1yo6a1 | 250 | Putative carbonyl reductase sniffer {Caenorhabditi | 99.47 | |
| d1oaaa_ | 259 | Sepiapterin reductase {Mouse (Mus musculus) [TaxId | 99.46 | |
| d2pd4a1 | 274 | Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2 | 99.39 | |
| d1xu9a_ | 269 | 11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom | 99.39 | |
| d1qsga_ | 258 | Enoyl-ACP reductase {Escherichia coli [TaxId: 562] | 99.39 | |
| d1wmaa1 | 275 | Carbonyl reductase/20beta-hydroxysteroid dehydroge | 99.38 | |
| d1dhra_ | 236 | Dihydropteridin reductase (pteridine reductase) {R | 99.37 | |
| d1e7wa_ | 284 | Dihydropteridin reductase (pteridine reductase) {L | 99.36 | |
| d1mxha_ | 266 | Dihydropteridin reductase (pteridine reductase) {T | 99.33 | |
| d1ooea_ | 235 | Dihydropteridin reductase (pteridine reductase) {N | 99.31 | |
| d2h7ma1 | 268 | Enoyl-ACP reductase {Mycobacterium tuberculosis, T | 99.27 | |
| d1fjha_ | 257 | 3-alpha-hydroxysteroid dehydrogenase {Comamonas te | 99.17 | |
| d1luaa1 | 191 | Methylene-tetrahydromethanopterin dehydrogenase {M | 99.09 | |
| d1d7oa_ | 297 | Enoyl-ACP reductase {Oil seed rape (Brassica napus | 98.99 | |
| d1uh5a_ | 329 | Enoyl-ACP reductase {Malaria parasite (Plasmodium | 98.68 | |
| d1lssa_ | 132 | Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax | 98.67 | |
| d2hmva1 | 134 | Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | 98.48 | |
| d1e5qa1 | 182 | Saccharopine reductase {Rice blast fungus (Magnapo | 98.07 | |
| d1jaya_ | 212 | Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae | 97.95 | |
| d1t4ba1 | 146 | Aspartate beta-semialdehyde dehydrogenase {Escheri | 97.88 | |
| d1mb4a1 | 147 | Aspartate beta-semialdehyde dehydrogenase {Vibrio | 97.64 | |
| d1iz0a2 | 171 | Quinone oxidoreductase {Thermus thermophilus [TaxI | 97.64 | |
| d1id1a_ | 153 | Rck domain from putative potassium channel Kch {Es | 97.63 | |
| d1bg6a2 | 184 | N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A | 97.62 | |
| d1kjqa2 | 111 | Glycinamide ribonucleotide transformylase PurT, N- | 97.61 | |
| d1v3va2 | 182 | Leukotriene b4 12-hydroxydehydrogenase/prostagland | 97.6 | |
| d1ks9a2 | 167 | Ketopantoate reductase PanE {Escherichia coli [Tax | 97.53 | |
| d1pqwa_ | 183 | Putative enoyl reductase domain of polyketide synt | 97.49 | |
| d1yb5a2 | 174 | Quinone oxidoreductase {Human (Homo sapiens) [TaxI | 97.47 | |
| d2f1ka2 | 165 | Prephenate dehydrogenase TyrA {Synechocystis sp. p | 97.46 | |
| d1mlda1 | 144 | Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 | 97.43 | |
| d1vkna1 | 176 | N-acetyl-gamma-glutamyl-phosphate reductase ArgC { | 97.37 | |
| d1gpja2 | 159 | Glutamyl tRNA-reductase middle domain {Archaeon Me | 97.35 | |
| d1xa0a2 | 176 | B. subtilis YhfP homologue {Bacillus stearothermop | 97.32 | |
| d2jfga1 | 93 | UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase | 97.32 | |
| d1o8ca2 | 77 | Hypothetical protein YhdH {Escherichia coli [TaxId | 97.31 | |
| d1hyea1 | 145 | MJ0490, lactate/malate dehydrogenase {Archaeon Met | 97.28 | |
| d1vi2a1 | 182 | Putative shikimate dehydrogenase YdiB {Escherichia | 97.25 | |
| d2hjsa1 | 144 | Usg-1 protein homolog PA3116 {Pseudomonas aerugino | 97.25 | |
| d1qora2 | 179 | Quinone oxidoreductase {Escherichia coli [TaxId: 5 | 97.23 | |
| d1pjqa1 | 113 | Siroheme synthase CysG, domain 1 {Salmonella typhi | 97.21 | |
| d1ez4a1 | 146 | Lactate dehydrogenase {Lactobacillus pentosus [Tax | 97.17 | |
| d2fy8a1 | 129 | Potassium channel-related protein MthK {Archaeon M | 97.15 | |
| d1yqga2 | 152 | Pyrroline-5-carboxylate reductase ProC {Neisseria | 97.09 | |
| d2pv7a2 | 152 | Prephenate dehydrogenase TyrA {Haemophilus influen | 97.06 | |
| d1uufa2 | 168 | Hypothetical protein YahK {Escherichia coli [TaxId | 97.02 | |
| d1vpda2 | 161 | Hydroxyisobutyrate dehydrogenase {Salmonella typhi | 96.99 | |
| d1e3ja2 | 170 | Ketose reductase (sorbitol dehydrogenase) {Silverl | 96.97 | |
| d1piwa2 | 168 | Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas | 96.94 | |
| d1i36a2 | 152 | Conserved hypothetical protein MTH1747 {Archaeon M | 96.93 | |
| d1txga2 | 180 | Glycerol-3- phosphate dehydrogenase {Archaeoglobus | 96.91 | |
| d2ahra2 | 152 | Pyrroline-5-carboxylate reductase ProC {Streptococ | 96.91 | |
| d1mv8a2 | 202 | GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos | 96.9 | |
| d2g17a1 | 179 | N-acetyl-gamma-glutamyl-phosphate reductase ArgC { | 96.87 | |
| d1tt7a2 | 167 | Hypothetical protein YhfP {Bacillus subtilis [TaxI | 96.75 | |
| d1nyta1 | 170 | Shikimate 5-dehydrogenase AroE {Escherichia coli [ | 96.74 | |
| d1ldna1 | 148 | Lactate dehydrogenase {Bacillus stearothermophilus | 96.72 | |
| d1u7za_ | 223 | Coenzyme A biosynthesis bifunctional protein CoaBC | 96.71 | |
| d3cuma2 | 162 | Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru | 96.7 | |
| d1vj1a2 | 187 | Putative zinc-binding alcohol dehydrogenase {Mouse | 96.64 | |
| d1vj0a2 | 182 | Hypothetical protein TM0436 {Thermotoga maritima [ | 96.61 | |
| d1n1ea2 | 189 | Glycerol-3- phosphate dehydrogenase {Trypanosome ( | 96.59 | |
| d1i0za1 | 160 | Lactate dehydrogenase {Human (Homo sapiens), heart | 96.56 | |
| d1hyha1 | 146 | L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La | 96.55 | |
| d1pl8a2 | 171 | Ketose reductase (sorbitol dehydrogenase) {Human ( | 96.54 | |
| d1y6ja1 | 142 | Lactate dehydrogenase {Clostridium thermocellum [T | 96.48 | |
| d2cmda1 | 145 | Malate dehydrogenase {Escherichia coli [TaxId: 562 | 96.4 | |
| d1a5za1 | 140 | Lactate dehydrogenase {Thermotoga maritima [TaxId: | 96.4 | |
| d1o6za1 | 142 | Malate dehydrogenase {Archaeon Haloarcula marismor | 96.38 | |
| d1guza1 | 142 | Malate dehydrogenase {Chlorobium vibrioforme [TaxI | 96.35 | |
| d1y7ta1 | 154 | Malate dehydrogenase {Thermus thermophilus [TaxId: | 96.33 | |
| d1o89a2 | 177 | Hypothetical protein YhdH {Escherichia coli [TaxId | 96.31 | |
| d1llua2 | 166 | Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax | 96.28 | |
| d1uxja1 | 142 | Malate dehydrogenase {Chloroflexus aurantiacus [Ta | 96.27 | |
| d7mdha1 | 175 | Malate dehydrogenase {Sorghum (Sorghum vulgare), c | 96.27 | |
| d2g5ca2 | 171 | Prephenate dehydrogenase TyrA {Aquifex aeolicus [T | 96.22 | |
| d1llda1 | 143 | Lactate dehydrogenase {Bifidobacterium longum, str | 96.19 | |
| d1ojua1 | 142 | Malate dehydrogenase {Archaeon Archaeoglobus fulgi | 96.18 | |
| d1pjca1 | 168 | L-alanine dehydrogenase {Phormidium lapideum [TaxI | 96.16 | |
| d1ebda2 | 117 | Dihydrolipoamide dehydrogenase {Bacillus stearothe | 96.15 | |
| d1npya1 | 167 | Shikimate 5-dehydrogenase-like protein HI0607 {Hae | 96.15 | |
| d2ldxa1 | 159 | Lactate dehydrogenase {Mouse (Mus musculus) [TaxId | 96.15 | |
| d2gz1a1 | 154 | Aspartate beta-semialdehyde dehydrogenase {Strepto | 96.14 | |
| d1vm6a3 | 128 | Dihydrodipicolinate reductase {Thermotoga maritima | 96.12 | |
| d2cvoa1 | 183 | Putative semialdehyde dehydrogenase {Rice (Oryza s | 96.12 | |
| d1p77a1 | 171 | Shikimate 5-dehydrogenase AroE {Haemophilus influe | 96.12 | |
| d1pzga1 | 154 | Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5 | 96.11 | |
| d2pgda2 | 176 | 6-phosphogluconate dehydrogenase {Sheep (Ovis orie | 96.01 | |
| d1d1ta2 | 176 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 96.01 | |
| d1jvba2 | 170 | Alcohol dehydrogenase {Archaeon Sulfolobus solfata | 95.98 | |
| d1li4a1 | 163 | S-adenosylhomocystein hydrolase {Human (Homo sapie | 95.97 | |
| d1jqba2 | 174 | Bacterial secondary alcohol dehydrogenase {Clostri | 95.94 | |
| d2jhfa2 | 176 | Alcohol dehydrogenase {Horse (Equus caballus) [Tax | 95.92 | |
| d3lada2 | 119 | Dihydrolipoamide dehydrogenase {Azotobacter vinela | 95.88 | |
| d5mdha1 | 154 | Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 | 95.85 | |
| d1h6va2 | 122 | Mammalian thioredoxin reductase {Rat (Rattus norve | 95.82 | |
| d1v59a2 | 122 | Dihydrolipoamide dehydrogenase {Baker's yeast (Sac | 95.77 | |
| d1rjwa2 | 168 | Alcohol dehydrogenase {Bacillus stearothermophilus | 95.75 | |
| d1e3ia2 | 174 | Alcohol dehydrogenase {Mouse (Mus musculus), class | 95.63 | |
| d1gesa2 | 116 | Glutathione reductase {Escherichia coli [TaxId: 56 | 95.59 | |
| d1d7ya2 | 121 | NADH-dependent ferredoxin reductase, BphA4 {Pseudo | 95.56 | |
| d1qp8a1 | 181 | Putative formate dehydrogenase {Archaeon Pyrobacul | 95.56 | |
| d1v8ba1 | 163 | S-adenosylhomocystein hydrolase {Plasmodium falcip | 95.55 | |
| d3grsa2 | 125 | Glutathione reductase {Human (Homo sapiens) [TaxId | 95.54 | |
| d1lvla2 | 115 | Dihydrolipoamide dehydrogenase {Pseudomonas putida | 95.51 | |
| d1nhpa2 | 123 | NADH peroxidase {Enterococcus faecalis [TaxId: 135 | 95.48 | |
| d1f0ya2 | 192 | Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum | 95.42 | |
| d1onfa2 | 117 | Glutathione reductase {Plasmodium falciparum [TaxI | 95.36 | |
| d1t2da1 | 150 | Lactate dehydrogenase {Malaria parasite (Plasmodiu | 95.32 | |
| d1yl7a1 | 135 | Dihydrodipicolinate reductase {Mycobacterium tuber | 95.2 | |
| d1pgja2 | 178 | 6-phosphogluconate dehydrogenase {Trypanosoma bruc | 95.04 | |
| d1dxla2 | 123 | Dihydrolipoamide dehydrogenase {Garden pea (Pisum | 95.02 | |
| d1p3da1 | 96 | UDP-N-acetylmuramate-alanine ligase MurC {Haemophi | 94.99 | |
| d1ojta2 | 125 | Dihydrolipoamide dehydrogenase {Neisseria meningit | 94.97 | |
| d2fzwa2 | 176 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 94.94 | |
| d1jw9b_ | 247 | Molybdenum cofactor biosynthesis protein MoeB {Esc | 94.91 | |
| d1xhca2 | 122 | NADH oxidase /nitrite reductase {Pyrococcus furios | 94.9 | |
| d2csua1 | 129 | Acetate-CoA ligase alpha chain, AcdA, N-terminal d | 94.81 | |
| d1l7da1 | 183 | Nicotinamide nucleotide transhydrogenase dI compon | 94.8 | |
| d1c0pa1 | 268 | D-aminoacid oxidase, N-terminal domain {Rhodotorul | 94.75 | |
| d1p0fa2 | 174 | Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: | 94.74 | |
| d3etja2 | 78 | N5-carboxyaminoimidazole ribonucleotide synthetase | 94.72 | |
| d1mx3a1 | 193 | Transcription corepressor CtbP {Human (Homo sapien | 94.69 | |
| d1wdka3 | 186 | Fatty oxidation complex alpha subunit, middle doma | 94.63 | |
| d1ps9a3 | 179 | 2,4-dienoyl-CoA reductase, middle domain {Escheric | 94.63 | |
| d1j4aa1 | 197 | D-lactate dehydrogenase {Lactobacillus helveticus | 94.61 | |
| d1q1ra2 | 133 | Putidaredoxin reductase {Pseudomonas putida [TaxId | 94.5 | |
| d1kola2 | 195 | Formaldehyde dehydrogenase {Pseudomonas putida [Ta | 94.34 | |
| d1mo9a2 | 121 | NADH-dependent 2-ketopropyl coenzyme M oxidoreduct | 94.26 | |
| d1f8fa2 | 174 | Benzyl alcohol dehydrogenase {Acinetobacter calcoa | 94.25 | |
| d2dt5a2 | 126 | Transcriptional repressor Rex, C-terminal domain { | 94.25 | |
| d2d59a1 | 139 | Hypothetical protein PH1109 {Pyrococcus horikoshii | 94.09 | |
| d1dxya1 | 199 | D-2-hydroxyisocaproate dehydrogenase {Lactobacillu | 94.04 | |
| d1ygya1 | 184 | Phosphoglycerate dehydrogenase {Mycobacterium tube | 93.99 | |
| d1gdha1 | 191 | D-glycerate dehydrogenase {Hyphomicrobium methylov | 93.99 | |
| d2voua1 | 265 | Dihydroxypyridine hydroxylase DhpH {Arthrobacter n | 93.93 | |
| d1gtea4 | 196 | Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su | 93.9 | |
| d1h2ba2 | 172 | Alcohol dehydrogenase {Archaeon Aeropyrum pernix [ | 93.84 | |
| d1seza1 | 373 | Protoporphyrinogen oxidase {Tobacco (Nicotiana tab | 93.73 | |
| d1diha1 | 162 | Dihydrodipicolinate reductase {Escherichia coli [T | 93.67 | |
| d1c1da1 | 201 | Phenylalanine dehydrogenase {Rhodococcus sp., M4 [ | 93.66 | |
| d1nvta1 | 177 | Shikimate 5-dehydrogenase AroE {Archaeon Methanoco | 93.66 | |
| d2naca1 | 188 | Formate dehydrogenase {Pseudomonas sp., strain 101 | 93.66 | |
| d2bi7a1 | 314 | UDP-galactopyranose mutase, N-terminal domain {Kle | 93.61 | |
| d1r0ka2 | 150 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z | 93.58 | |
| d1y81a1 | 116 | Hypothetical protein PF0725 {Pyrococcus furiosus [ | 93.55 | |
| d1ryia1 | 276 | Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]} | 93.47 | |
| d1kyqa1 | 150 | Bifunctional dehydrogenase/ferrochelatase Met8p, N | 93.33 | |
| d2iida1 | 370 | L-aminoacid oxidase {Malayan pit viper (Calloselas | 93.29 | |
| d2czca2 | 172 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 93.06 | |
| d2ivda1 | 347 | Protoporphyrinogen oxidase {Myxococcus xanthus [Ta | 93.0 | |
| d1sc6a1 | 188 | Phosphoglycerate dehydrogenase {Escherichia coli [ | 92.88 | |
| d1q0qa2 | 151 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase {E | 92.81 | |
| d1fcda1 | 186 | Flavocytochrome c sulfide dehydrogenase, FCSD, fla | 92.5 | |
| d1djqa3 | 233 | Trimethylamine dehydrogenase, middle domain {Methy | 92.47 | |
| d1obba1 | 171 | Alpha-glucosidase AglA {Thermotoga maritima [TaxId | 92.43 | |
| d2dw4a2 | 449 | Lysine-specific histone demethylase 1, LSD1 {Human | 92.39 | |
| d1cdoa2 | 175 | Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI | 92.35 | |
| d1f06a1 | 170 | Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb | 92.3 | |
| d1gu7a2 | 189 | 2,4-dienoyl-CoA reductase {Yeast (Candida tropical | 92.27 | |
| d1djqa2 | 156 | Trimethylamine dehydrogenase, C-terminal domain {M | 92.19 | |
| d1yovb1 | 426 | UBA3 {Human (Homo sapiens) [TaxId: 9606]} | 92.12 | |
| d1feca2 | 117 | Trypanothione reductase {Crithidia fasciculata [Ta | 92.1 | |
| d1aoga2 | 117 | Trypanothione reductase {Trypanosoma cruzi [TaxId: | 92.07 | |
| d1j6ua1 | 89 | UDP-N-acetylmuramate-alanine ligase MurC {Thermoto | 92.07 | |
| d1edza1 | 171 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 91.78 | |
| d1b7go1 | 178 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 91.66 | |
| d1a4ia1 | 170 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 91.66 | |
| d1k0ia1 | 292 | p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a | 91.63 | |
| d2bcgg1 | 297 | Guanine nucleotide dissociation inhibitor, GDI {Ba | 91.31 | |
| d1b0aa1 | 166 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 91.06 | |
| d1q1ra1 | 185 | Putidaredoxin reductase {Pseudomonas putida [TaxId | 91.0 | |
| d1a9xa4 | 121 | Carbamoyl phosphate synthetase (CPS), large subuni | 90.85 | |
| d2i76a2 | 153 | Hypothetical protein TM1727 {Thermotoga maritima [ | 90.38 | |
| d1kifa1 | 246 | D-aminoacid oxidase, N-terminal domain {Pig (Sus s | 90.34 | |
| d3c96a1 | 288 | Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: | 90.33 | |
| d1yova1 | 529 | Amyloid beta precursor protein-binding protein 1, | 90.3 | |
| d1dlja2 | 196 | UDP-glucose dehydrogenase (UDPGDH) {Streptococcus | 90.25 | |
| d2gf3a1 | 281 | Sarcosine oxidase {Bacillus sp., strain b0618 [Tax | 90.15 | |
| d1i8ta1 | 298 | UDP-galactopyranose mutase, N-terminal domain {Esc | 90.07 | |
| d1hwxa1 | 293 | Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: | 89.89 | |
| d2gv8a1 | 335 | Flavin-dependent monoxygenase SPBP16F5.08c {Schizo | 89.47 | |
| d1pj5a2 | 305 | N,N-dimethylglycine oxidase {Arthrobacter globifor | 89.27 | |
| d1d7ya1 | 183 | NADH-dependent ferredoxin reductase, BphA4 {Pseudo | 89.01 | |
| d1nhpa1 | 198 | NADH peroxidase {Enterococcus faecalis [TaxId: 135 | 88.91 | |
| d1cf2o1 | 171 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 88.79 | |
| d1iuka_ | 136 | Hypothetical protein TT1466 {Thermus thermophilus | 88.63 | |
| d1d5ta1 | 336 | Guanine nucleotide dissociation inhibitor, GDI {Co | 88.47 | |
| d1vjta1 | 193 | Putative alpha-glucosidase TM0752 {Thermotoga mari | 88.45 | |
| d1b5qa1 | 347 | Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]} | 88.37 | |
| d2vapa1 | 209 | Cell-division protein FtsZ {Archaeon Methanococcus | 87.71 | |
| d1xhca1 | 167 | NADH oxidase /nitrite reductase {Pyrococcus furios | 87.61 | |
| d1a9xa3 | 127 | Carbamoyl phosphate synthetase (CPS), large subuni | 87.52 | |
| d1gsoa2 | 105 | Glycinamide ribonucleotide synthetase (GAR-syn), N | 87.49 | |
| d1m6ia2 | 137 | Apoptosis-inducing factor (AIF) {Human (Homo sapie | 86.92 | |
| d1u0sy_ | 118 | CheY protein {Thermotoga maritima [TaxId: 2336]} | 86.55 | |
| d1up7a1 | 162 | 6-phospho-beta-glucosidase {Thermotoga maritima [T | 86.53 | |
| d2v5za1 | 383 | Monoamine oxidase B {Human (Homo sapiens) [TaxId: | 86.53 | |
| d1w5fa1 | 194 | Cell-division protein FtsZ {Thermotoga maritima [T | 86.23 | |
| d2nu7a1 | 119 | Succinyl-CoA synthetase, alpha-chain, N-terminal ( | 85.83 | |
| d2i0za1 | 251 | Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396] | 85.71 | |
| d1nvmb1 | 157 | Acetaldehyde dehydrogenase (acylating) {Pseudomona | 85.27 | |
| d1w4xa1 | 298 | Phenylacetone monooxygenase {Thermobifida fusca [T | 84.67 | |
| d1oi7a1 | 121 | Succinyl-CoA synthetase, alpha-chain, N-terminal ( | 84.54 | |
| d1v9la1 | 242 | Glutamate dehydrogenase {Pyrobaculum islandicum [T | 84.4 | |
| d1gtea3 | 153 | Dihydropyrimidine dehydrogenase, domain 3 {Pig (Su | 84.21 | |
| d1tlta1 | 164 | Virulence factor MviM {Escherichia coli [TaxId: 56 | 83.87 | |
| d1n4wa1 | 367 | Cholesterol oxidase of GMC family {Streptomyces sp | 83.49 | |
| d1mo9a1 | 261 | NADH-dependent 2-ketopropyl coenzyme M oxidoreduct | 83.11 | |
| d2blna2 | 203 | Polymyxin resistance protein ArnA, N-terminal doma | 83.01 | |
| d2gv8a2 | 107 | Flavin-dependent monoxygenase SPBP16F5.08c {Schizo | 82.33 | |
| d1s6ya1 | 169 | 6-phospho-beta-glucosidase {Bacillus stearothermop | 82.16 | |
| d1euca1 | 130 | Succinyl-CoA synthetase, alpha-chain, N-terminal ( | 82.1 | |
| d1y0pa2 | 308 | Flavocytochrome c3 (respiratory fumarate reductase | 82.07 | |
| d1ydwa1 | 184 | Probable oxidoreductase At4g09670 {Thale cress (Ar | 81.95 | |
| d1j5pa4 | 132 | Hypothetical protein TM1643 {Thermotoga maritima [ | 81.94 | |
| d1leha1 | 230 | Leucine dehydrogenase {Bacillus sphaericus [TaxId: | 81.59 | |
| d1u8xx1 | 167 | Maltose-6'-phosphate glucosidase GlvA {Bacillus su | 80.5 | |
| d1m6ya2 | 192 | TM0872, methyltransferase domain {Thermotoga marit | 80.43 | |
| d2gqfa1 | 253 | Hypothetical protein HI0933 {Haemophilus influenza | 80.43 | |
| d1rq2a1 | 198 | Cell-division protein FtsZ {Mycobacterium tubercul | 80.03 |
| >d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Biliverdin IX beta reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=7.2e-30 Score=218.57 Aligned_cols=187 Identities=13% Similarity=0.116 Sum_probs=156.1
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEECCcc----
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG---- 172 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~g---- 172 (305)
.+++|+||||||+||++++++|+++||+|++++|++++.......+++++.+|+.|.+++.++++++|+||++.+.
T Consensus 2 ~~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~gD~~d~~~l~~al~~~d~vi~~~g~~~~~ 81 (205)
T d1hdoa_ 2 AVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAADVDKTVAGQDAVIVLLGTRNDL 81 (205)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSSCCCSEEEESCTTSHHHHHHHHTTCSEEEECCCCTTCC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhcccccccccccccccccchhhHHHHhcCCCEEEEEeccCCch
Confidence 4689999999999999999999999999999999998876666678999999999999999999999999988331
Q ss_pred -----------hHhhhhhhcCCCEEEEEcccccccCCCCcccccchHHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCC
Q 021928 173 -----------FISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMASGIPYTIIRTGVLQNTPGG 241 (305)
Q Consensus 173 -----------~~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~ 241 (305)
.+.+++++.+++|||++||.+++.......... ......+..+|+++++++++||+|||+++.+.+..
T Consensus 82 ~~~~~~~~~~~~l~~aa~~~~v~r~i~~ss~~~~~~~~~~~~~~-~~~~~~~~~~e~~l~~~~~~~tiirp~~~~~~~~~ 160 (205)
T d1hdoa_ 82 SPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTKVPPRL-QAVTDDHIRMHKVLRESGLKYVAVMPPHIGDQPLT 160 (205)
T ss_dssp SCCCHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCTTCSCGGG-HHHHHHHHHHHHHHHHTCSEEEEECCSEEECCCCC
T ss_pred hhhhhhHHHHHHHHHHHHhcCCCeEEEEeeeeccCCCccccccc-cccchHHHHHHHHHHhcCCceEEEecceecCCCCc
Confidence 256778899999999999988876544332221 12344566789999999999999999999887776
Q ss_pred CcceeeecCCCCCCccCHHHHHHHHHHHhhCCCCCCcEEEEec
Q 021928 242 KQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVVN 284 (305)
Q Consensus 242 ~~~~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~~~~~~~~v~~ 284 (305)
+.......+.....+|+++|+|++++.+++++...++.+.++.
T Consensus 161 ~~~~~~~~~~~~~~~i~~~DvA~~~~~~l~~~~~~g~~~~~s~ 203 (205)
T d1hdoa_ 161 GAYTVTLDGRGPSRVISKHDLGHFMLRCLTTDEYDGHSTYPSH 203 (205)
T ss_dssp SCCEEESSSCSSCSEEEHHHHHHHHHHTTSCSTTTTCEEEEEC
T ss_pred ccEEEeeCCCCCCCcCCHHHHHHHHHHHhCCCCCCCEEEecCC
Confidence 6655555566677899999999999999999998899888874
|
| >d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein At5g02240 (T7H20 290) species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.94 E-value=1.3e-25 Score=192.90 Aligned_cols=205 Identities=23% Similarity=0.374 Sum_probs=156.3
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCe--EEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEECCcc--
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTR--IKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG-- 172 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~--V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~g-- 172 (305)
.+++||||||||+||++++++|+++|++ |+.+.|++++... ...+++++.+|+.+.+.+.++++++|+|||+++.
T Consensus 2 ~~~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~-~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~~ 80 (252)
T d2q46a1 2 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEK-IGGEADVFIGDITDADSINPAFQGIDALVILTSAVP 80 (252)
T ss_dssp SCCEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHH-TTCCTTEEECCTTSHHHHHHHHTTCSEEEECCCCCC
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHh-ccCCcEEEEeeeccccccccccccceeeEEEEeecc
Confidence 3689999999999999999999999975 6677888876543 3457999999999999999999999999988320
Q ss_pred ---------------------------------hHhhhhhhcCCCEEEEEcccccccCCCCcccccchHHHHHHHHHHHH
Q 021928 173 ---------------------------------FISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESM 219 (305)
Q Consensus 173 ---------------------------------~~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~~~~~~aE~~ 219 (305)
.+...+.....+++.+.|+...+.+......+........+...+.+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (252)
T d2q46a1 81 KMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGSMGGTNPDHPLNKLGNGNILVWKRKAEQY 160 (252)
T ss_dssp EECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEETTTTCTTCGGGGGGGCCHHHHHHHHHHH
T ss_pred ccccccchhhhhhcccccccchhhhccccccceeeccccccccccccccccccccCCCCcccccccccchhhhhhhhhhh
Confidence 01223455778899999998877665544443333333445556777
Q ss_pred HHhCCCCEEEEecCCcccCCCCCcceeeec----CCCCCCccCHHHHHHHHHHHhhCCCCCCcEEEEecCC----cCHHH
Q 021928 220 LMASGIPYTIIRTGVLQNTPGGKQGFQFEE----GCAANGSLSKEDAAFICVEALESIPQTGLIFEVVNGE----EKVSD 291 (305)
Q Consensus 220 l~~~gi~~tilRPg~l~~~~~~~~~~~~~~----~~~~~~~Is~~DvA~~iv~~l~~~~~~~~~~~v~~g~----~s~~d 291 (305)
..+.+++++++||+++.+............ .....++|+++|||++++.+++++...+++|+|++++ .++.|
T Consensus 161 ~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~a~~~~l~~~~~~g~~~~i~~~~~~~~~~~~~ 240 (252)
T d2q46a1 161 LADSGTPYTIIRAGGLLDKEGGVRELLVGKDDELLQTDTKTVPRADVAEVCIQALLFEEAKNKAFDLGSKPEGTSTPTKD 240 (252)
T ss_dssp HHHSSSCEEEEEECEEECSCTTSSCEEEESTTGGGGSSCCEEEHHHHHHHHHHHTTCGGGTTEEEEEEECCTTTSCCCCC
T ss_pred hhcccccceeecceEEECCCcchhhhhhccCcccccCCCCeEEHHHHHHHHHHHhCCccccCcEEEEeeCCCCCChhHHH
Confidence 888999999999999776554333333322 2334679999999999999999998889999999754 35789
Q ss_pred HHHHHHHhhhh
Q 021928 292 WKKCFSRLMEK 302 (305)
Q Consensus 292 ~~~~~~~l~~~ 302 (305)
|.++|.++.+|
T Consensus 241 ~~~lf~~i~~r 251 (252)
T d2q46a1 241 FKALFSQVTSR 251 (252)
T ss_dssp HHHHHTTCCCC
T ss_pred HHHHHHHHHhc
Confidence 99999888764
|
| >d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Pinoresinol-lariciresinol reductase species: Giant arborvitae (Thuja plicata) [TaxId: 3316]
Probab=99.91 E-value=5.7e-24 Score=190.05 Aligned_cols=208 Identities=13% Similarity=0.110 Sum_probs=154.1
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchh--------hhhcCCCcEEeecCCCCHHHHHHHhcCccEEEE
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA--------MESFGTYVESMAGDASNKKFLKTALRGVRSIIC 168 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~--------~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~ 168 (305)
.+++||||||||+||++|+++|+++||+|++++|++... ......+++++.+|+.|.+.+.+++.+++++++
T Consensus 2 ~k~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~~v~~v~~d~~d~~~~~~~~~~~~~~~~ 81 (312)
T d1qyda_ 2 KKSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQVDVVIS 81 (312)
T ss_dssp CCCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTCSEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhhccCCcEEEEeecccchhhhhhccCcchhhh
Confidence 357899999999999999999999999999999986431 112345799999999999999999999999997
Q ss_pred CCcc-----------hHhhhhhhcCCCEEEEEcccccccCCCCcccccchHHHHHHHHHHHHHHhCCCCEEEEecCCccc
Q 021928 169 PSEG-----------FISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMASGIPYTIIRTGVLQN 237 (305)
Q Consensus 169 ~~~g-----------~~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~~~~~~aE~~l~~~gi~~tilRPg~l~~ 237 (305)
+.+. .+..++.+.+..++|+.|+.+++.................+..++++.++.+++|+++||+.+.+
T Consensus 82 ~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~Ss~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~~~~g 161 (312)
T d1qyda_ 82 ALAGGVLSHHILEQLKLVEAIKEAGNIKRFLPSEFGMDPDIMEHALQPGSITFIDKRKVRRAIEAASIPYTYVSSNMFAG 161 (312)
T ss_dssp CCCCSSSSTTTTTHHHHHHHHHHSCCCSEEECSCCSSCTTSCCCCCSSTTHHHHHHHHHHHHHHHTTCCBCEEECCEEHH
T ss_pred hhhhcccccchhhhhHHHHHHHHhcCCcEEEEeeccccCCCcccccchhhhhhHHHHHHHHhhcccccceEEeccceeec
Confidence 6321 14556777777788888888776543222111112223345567788889999999999998653
Q ss_pred CCC-------------CCcceeeecCCCCCCccCHHHHHHHHHHHhhCCCCCCcEEEEe-cCC-cCHHHHHHHHHHhhhh
Q 021928 238 TPG-------------GKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVV-NGE-EKVSDWKKCFSRLMEK 302 (305)
Q Consensus 238 ~~~-------------~~~~~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~~~~~~~~v~-~g~-~s~~d~~~~~~~l~~~ 302 (305)
... ......++.++....+|+++|+|++++.++.++...++.+++. +++ .|++++++.+.+++++
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~ 241 (312)
T d1qyda_ 162 YFAGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQTLNKTMYIRPPMNILSQKEVIQIWERLSEQ 241 (312)
T ss_dssp HHTTTSSCTTCCSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHHTTCGGGSSSEEECCCGGGEEEHHHHHHHHHHHHTC
T ss_pred CCccchhhHHHHhhhcccccccccccccccceeeHHHHHHHHHHHhcCccccCceEEEeCCCcCCCHHHHHHHHHHHHCC
Confidence 210 1122223455666789999999999999999988777765544 444 4899999999999887
Q ss_pred cC
Q 021928 303 TG 304 (305)
Q Consensus 303 ~~ 304 (305)
+.
T Consensus 242 ~~ 243 (312)
T d1qyda_ 242 NL 243 (312)
T ss_dssp CC
T ss_pred CC
Confidence 53
|
| >d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose-3', 5'-epimerase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.90 E-value=8.7e-23 Score=187.83 Aligned_cols=203 Identities=12% Similarity=0.003 Sum_probs=150.5
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEECCcc----
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG---- 172 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~g---- 172 (305)
++|+||||||+||||++|+++|+++||+|++++|.............++..+|+.+.+.+.++++++|+|||++..
T Consensus 14 ~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~Vih~a~~~~~~ 93 (363)
T d2c5aa1 14 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMFCDEFHLVDLRVMENCLKVTEGVDHVFNLAADMGGM 93 (363)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGGGTCSEEEECCTTSHHHHHHHHTTCSEEEECCCCCCCH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccchhhhcccCcEEEeechhHHHHHHHhhcCCeEeecccccccc
Confidence 5688999999999999999999999999999987654432222345688999999999999999999999987321
Q ss_pred -------------------hHhhhhhhcCCCEEEEEcccccccCCCC---------------cccccchHHHHHHHHHHH
Q 021928 173 -------------------FISNAGSLKGVQHVILLSQLSVYRGSGG---------------IQALMKGNARKLAEQDES 218 (305)
Q Consensus 173 -------------------~~~~~a~~~gv~~~V~iSS~~~~~~~~~---------------~~~~~~~~~~~~~~~aE~ 218 (305)
.+.+++++.++++||++||..++..... ..+...| ...|..+|.
T Consensus 94 ~~~~~~~~~~~~~n~~gt~~ll~~~~~~~vk~~i~~SS~~~~~~~~~~~~~~~~~~~~e~~~~~p~~~Y--g~sK~~~E~ 171 (363)
T d2c5aa1 94 GFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAF--GLEKLATEE 171 (363)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSSBCCSSHH--HHHHHHHHH
T ss_pred cccccccccccccccchhhHHHHhHHhhCccccccccccccccccccccccccccccccCCcCCCCCHH--HHHHHHHHH
Confidence 1455678899999999999988763211 0111112 223445565
Q ss_pred HHH----hCCCCEEEEecCCcccCCC--------------------CCcceeeecCCCCCCccCHHHHHHHHHHHhhCCC
Q 021928 219 MLM----ASGIPYTIIRTGVLQNTPG--------------------GKQGFQFEEGCAANGSLSKEDAAFICVEALESIP 274 (305)
Q Consensus 219 ~l~----~~gi~~tilRPg~l~~~~~--------------------~~~~~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~ 274 (305)
+++ ..+++++++||+.+.+... ......++.+.....+++++|+++++..+++.+
T Consensus 172 ~~~~~~~~~gl~~~ilR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v~D~~~~~~~~~~~~- 250 (363)
T d2c5aa1 172 LCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLTKSD- 250 (363)
T ss_dssp HHHHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEECCEEHHHHHHHHHHHHHSS-
T ss_pred HHHHHHHHhCCCEEEEEeeeEeccCCcccccccccccccccccccccccccccCCCCeEEEEeehhHHHHHHHHHHhCC-
Confidence 554 4699999999988653221 111223344556678999999999999998754
Q ss_pred CCCcEEEEecCC-cCHHHHHHHHHHhhhhc
Q 021928 275 QTGLIFEVVNGE-EKVSDWKKCFSRLMEKT 303 (305)
Q Consensus 275 ~~~~~~~v~~g~-~s~~d~~~~~~~l~~~~ 303 (305)
.+..||++++. .++.|+++.+.+++++.
T Consensus 251 -~~~~~ni~~~~~~s~~~l~~~i~~~~g~~ 279 (363)
T d2c5aa1 251 -FREPVNIGSDEMVSMNEMAEMVLSFEEKK 279 (363)
T ss_dssp -CCSCEEECCCCCEEHHHHHHHHHHTTTCC
T ss_pred -CCCeEEEecCCcccHHHHHHHHHHHhCCC
Confidence 36789999876 58999999999988764
|
| >d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Phenylcoumaran benzylic ether reductase species: Loblolly pine (Pinus taeda) [TaxId: 3352]
Probab=99.90 E-value=2.7e-23 Score=184.16 Aligned_cols=207 Identities=14% Similarity=0.145 Sum_probs=156.2
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhh---------hhcCCCcEEeecCCCCHHHHHHHhcCccEEE
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM---------ESFGTYVESMAGDASNKKFLKTALRGVRSII 167 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~---------~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi 167 (305)
.+|+||||||||+||++++++|+++|++|++++|++.... .....+++++.+|+.+...+.+.+++++.|+
T Consensus 2 ~kkKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~vi 81 (307)
T d1qyca_ 2 SRSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKNVDVVI 81 (307)
T ss_dssp CCCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHTCSEEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhhccCCcEEEEeecccchhhhhhhhhceeee
Confidence 4689999999999999999999999999999999865421 1224578999999999999999999999999
Q ss_pred ECCcc-------hHhhhhhhcCCCEEEEEcccccccCCCCcccccchHHHHHHHHHHHHHHhCCCCEEEEecCCcccCC-
Q 021928 168 CPSEG-------FISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMASGIPYTIIRTGVLQNTP- 239 (305)
Q Consensus 168 ~~~~g-------~~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~~~~~~aE~~l~~~gi~~tilRPg~l~~~~- 239 (305)
+..+. .+.+++...+++++++.|+............... .....+...+.++++.+++++++||+.+.+..
T Consensus 82 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~~s~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~r~~~v~g~~~ 160 (307)
T d1qyca_ 82 STVGSLQIESQVNIIKAIKEVGTVKRFFPSEFGNDVDNVHAVEPAK-SVFEVKAKVRRAIEAEGIPYTYVSSNCFAGYFL 160 (307)
T ss_dssp ECCCGGGSGGGHHHHHHHHHHCCCSEEECSCCSSCTTSCCCCTTHH-HHHHHHHHHHHHHHHHTCCBEEEECCEEHHHHT
T ss_pred ecccccccchhhHHHHHHHHhccccceeeecccccccccccccccc-ccccccccccchhhccCCCceecccceecCCCc
Confidence 87432 2556677889999999998766543333222211 12223456778888999999999999855321
Q ss_pred ---C--------CCcceeeecCCCCCCccCHHHHHHHHHHHhhCCCCCCcEEEE-ecCC-cCHHHHHHHHHHhhhhcC
Q 021928 240 ---G--------GKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEV-VNGE-EKVSDWKKCFSRLMEKTG 304 (305)
Q Consensus 240 ---~--------~~~~~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~~~~~~~~v-~~g~-~s~~d~~~~~~~l~~~~~ 304 (305)
. ......++.++....+|+++|+|++++++++++...++.+++ .+++ .|+.|+++.+.+++|++.
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~~~~~~~~~s~~ei~~~~~~~~G~~~ 238 (307)
T d1qyca_ 161 RSLAQAGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDPRTLNKTLYLRLPANTLSLNELVALWEKKIDKTL 238 (307)
T ss_dssp TTTTCTTCSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTSSCGGGTTEEEECCCGGGEEEHHHHHHHHHHHTTSCC
T ss_pred cchhhhhhhhhhcccceeeecccccccCCcHHHHHHHHHHHhcChhhcCceeEEeCCCCccCHHHHHHHHHHHHCCCC
Confidence 0 112233345667788999999999999999988877776655 4544 589999999999998753
|
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Probab=99.89 E-value=2.1e-22 Score=185.61 Aligned_cols=201 Identities=12% Similarity=0.015 Sum_probs=143.0
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcch-----hh------hhcCCCcEEeecCCCCHHHHHHHhcCc--c
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-----AM------ESFGTYVESMAGDASNKKFLKTALRGV--R 164 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~-----~~------~~~~~~v~~v~~D~~d~~~~~~~~~~~--d 164 (305)
.|.|||||||||||++|+++|+++|++|++++|.... .. .....+++++.+|++|.+++.++++++ |
T Consensus 1 ~K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 80 (357)
T d1db3a_ 1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPD 80 (357)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCCS
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHHHHhccCCC
Confidence 3789999999999999999999999999999996432 11 112357899999999999999999876 9
Q ss_pred EEEECCcc----------------------hHhhhhhhcCC---CEEEEEcccccccCCC--------CcccccchHHHH
Q 021928 165 SIICPSEG----------------------FISNAGSLKGV---QHVILLSQLSVYRGSG--------GIQALMKGNARK 211 (305)
Q Consensus 165 ~Vi~~~~g----------------------~~~~~a~~~gv---~~~V~iSS~~~~~~~~--------~~~~~~~~~~~~ 211 (305)
+|+|+++- .+.+++++.++ .+||++||..+|+.+. ...+...|..
T Consensus 81 ~v~h~aa~~~~~~~~~~~~~~~~~Nv~gt~nllea~~~~~~~~~~r~i~~SS~~vYG~~~~~~~~E~~~~~P~~~Y~~-- 158 (357)
T d1db3a_ 81 EVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAV-- 158 (357)
T ss_dssp EEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCSSSBCTTSCCCCCSHHHH--
T ss_pred EEEEeecccccchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEEchhhhCCCCCCCcCCCCCCCCCChHHH--
Confidence 99988321 03456766655 4799999999885311 1122222322
Q ss_pred HHHHHHHHHH----hCCCCEEEEecCCcccCC-C-----------------CCc-ceeeecCCCCCCccCHHHHHHHHHH
Q 021928 212 LAEQDESMLM----ASGIPYTIIRTGVLQNTP-G-----------------GKQ-GFQFEEGCAANGSLSKEDAAFICVE 268 (305)
Q Consensus 212 ~~~~aE~~l~----~~gi~~tilRPg~l~~~~-~-----------------~~~-~~~~~~~~~~~~~Is~~DvA~~iv~ 268 (305)
.|..+|.+++ ..+++++++||+.+.+.. + ... .+.++.+.....+++++|+|+++..
T Consensus 159 sK~~~E~~~~~~~~~~~l~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~D~~~a~~~ 238 (357)
T d1db3a_ 159 AKLYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQWM 238 (357)
T ss_dssp HHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCEEEEEeccccCCCCCcCCCchHHHHHHHHHHhCCCceEEECCCCeeecceeechHHHHHHH
Confidence 3444565544 469999999998754321 1 111 2233455566789999999999999
Q ss_pred HhhCCCCCCcEEEEecCCc-CHHHHHHHHHHhhhh
Q 021928 269 ALESIPQTGLIFEVVNGEE-KVSDWKKCFSRLMEK 302 (305)
Q Consensus 269 ~l~~~~~~~~~~~v~~g~~-s~~d~~~~~~~l~~~ 302 (305)
+++.+ .++.|++++|+. ++.|+++++.+..+.
T Consensus 239 ~~~~~--~~~~yni~sg~~~s~~~~~~~~~~~~g~ 271 (357)
T d1db3a_ 239 MLQQE--QPEDFVIATGVQYSVRQFVEMAAAQLGI 271 (357)
T ss_dssp TTSSS--SCCCEEECCCCCEEHHHHHHHHHHTTTE
T ss_pred HHhCC--CCCeEEECCCCceehHHHHHHHHHHhCC
Confidence 98764 457999998774 899999999988764
|
| >d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: TAT-interacting protein TIP30 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.89 E-value=3.3e-23 Score=180.10 Aligned_cols=182 Identities=14% Similarity=0.143 Sum_probs=137.7
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCC--eEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEECCcc
Q 021928 95 PEARDAVLVTDGDSDIGQMVILSLIVKRT--RIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG 172 (305)
Q Consensus 95 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~g 172 (305)
..++++||||||||+||++|+++|+++|. +|++++|++.+........++...+|+.+.+++.++++++|+|||+++.
T Consensus 11 ~m~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~~~~~i~~~~~D~~~~~~~~~~~~~~d~vi~~~~~ 90 (232)
T d2bkaa1 11 RMQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKLDDYASAFQGHDVGFCCLGT 90 (232)
T ss_dssp HHTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGGGCEEEECCGGGGGGGGGGGSSCSEEEECCCC
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcccccceeeeeeecccccccccccccccccccccccc
Confidence 34568999999999999999999999994 8999999876644444457889999999999999999999999998431
Q ss_pred -------------------hHhhhhhhcCCCEEEEEcccccccCCCCcccccchHHHHHHHHHHHHHHhCCCC-EEEEec
Q 021928 173 -------------------FISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMASGIP-YTIIRT 232 (305)
Q Consensus 173 -------------------~~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~~~~~~aE~~l~~~gi~-~tilRP 232 (305)
.+.++|.+.++++||++|+.+++..+... | .+.|..+|+++++.+++ ++||||
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~v~~fi~~Ss~~~~~~~~~~--Y-----~~~K~~~E~~l~~~~~~~~~IlRP 163 (232)
T d2bkaa1 91 TRGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADKSSNFL--Y-----LQVKGEVEAKVEELKFDRYSVFRP 163 (232)
T ss_dssp CHHHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTTCSSH--H-----HHHHHHHHHHHHTTCCSEEEEEEC
T ss_pred cccccchhhhhhhcccccceeeecccccCccccccCCccccccCccch--h-----HHHHHHhhhccccccccceEEecC
Confidence 14566788999999999999887654432 2 23466789999999986 999999
Q ss_pred CCcccCCCCCcc-------e--eeecCCCCCCccCHHHHHHHHHHHhhCCCCCCcEEEEec
Q 021928 233 GVLQNTPGGKQG-------F--QFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVVN 284 (305)
Q Consensus 233 g~l~~~~~~~~~-------~--~~~~~~~~~~~Is~~DvA~~iv~~l~~~~~~~~~~~v~~ 284 (305)
|.+.+....... . .++........|+++|+|+++++++.++.. ++.+.+.+
T Consensus 164 ~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~~dvA~a~i~~~~~~~~-~~~~i~~~ 223 (232)
T d2bkaa1 164 GVLLCDRQESRPGEWLVRKFFGSLPDSWASGHSVPVVTVVRAMLNNVVRPRD-KQMELLEN 223 (232)
T ss_dssp CEEECTTGGGSHHHHHHHHHHCSCCTTGGGGTEEEHHHHHHHHHHHHTSCCC-SSEEEEEH
T ss_pred ceeecCCCcCcHHHHHHHHHhhccCCcccCCCeEEHHHHHHHHHHHHhcCcc-CCeEEEcH
Confidence 997654321110 0 011222234569999999999999977654 45666664
|
| >d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Negative transcriptional regulator NmrA species: Aspergillus nidulans [TaxId: 162425]
Probab=99.88 E-value=9.1e-22 Score=180.21 Aligned_cols=204 Identities=15% Similarity=0.153 Sum_probs=150.5
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhh--hh-cCCCcEEeecCCCC-HHHHHHHhcCccEEEECCc-
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM--ES-FGTYVESMAGDASN-KKFLKTALRGVRSIICPSE- 171 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~--~~-~~~~v~~v~~D~~d-~~~~~~~~~~~d~Vi~~~~- 171 (305)
..|+|+||||||+||++++++|+++||+|++++|++.+.. .. ...+++++.+|+.| .+.+..++.+++++++...
T Consensus 2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~v~~~~gD~~d~~~~~~~a~~~~~~~~~~~~~ 81 (350)
T d1xgka_ 2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPLMDTLFEGAHLAFINTTS 81 (350)
T ss_dssp CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHHTSTTEEEEESCCTTCHHHHHHHHTTCSEEEECCCS
T ss_pred CCCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchhhhhhhcccCCCEEEEeeCCCcHHHHHHHhcCCceEEeeccc
Confidence 3599999999999999999999999999999999876632 21 23479999999988 4557889999999997622
Q ss_pred ---------chHhhhhhhcCCCEEEEEcccccccCCCCcccccchHHHHHHHHHHHHHHhCCCCEEEEecCCcccCCCC-
Q 021928 172 ---------GFISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMASGIPYTIIRTGVLQNTPGG- 241 (305)
Q Consensus 172 ---------g~~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~- 241 (305)
..+.+++.+.|++++|+.||............. + ....+...+.++++.+++++++||+++.+....
T Consensus 82 ~~~~~~~~~~~~~~aa~~agv~~~v~~Ss~~~~~~~~~~~~~-~--~~~~k~~~~~~~~~~~~~~~~vr~~~~~~~~~~~ 158 (350)
T d1xgka_ 82 QAGDEIAIGKDLADAAKRAGTIQHYIYSSMPDHSLYGPWPAV-P--MWAPKFTVENYVRQLGLPSTFVYAGIYNNNFTSL 158 (350)
T ss_dssp TTSCHHHHHHHHHHHHHHHSCCSEEEEEECCCGGGTSSCCCC-T--TTHHHHHHHHHHHTSSSCEEEEEECEEGGGCBSS
T ss_pred ccchhhhhhhHHHHHHHHhCCCceEEEeeccccccCCcccch-h--hhhhHHHHHHHHHhhccCceeeeeceeecccccc
Confidence 126778889999988888887655432222111 1 112244677889999999999999986543210
Q ss_pred ----------Ccc-eee---ecCCCCCCccCH-HHHHHHHHHHhhCCC--CCCcEEEEecCCcCHHHHHHHHHHhhhhc
Q 021928 242 ----------KQG-FQF---EEGCAANGSLSK-EDAAFICVEALESIP--QTGLIFEVVNGEEKVSDWKKCFSRLMEKT 303 (305)
Q Consensus 242 ----------~~~-~~~---~~~~~~~~~Is~-~DvA~~iv~~l~~~~--~~~~~~~v~~g~~s~~d~~~~~~~l~~~~ 303 (305)
..+ ..+ ..++....+++. +|+|++++.++.+++ ..|+.|++++...|+.|+++.+++++|++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Dva~~v~~~l~~~~~~~~G~~~~~~g~~~T~~eia~~l~~~~G~~ 237 (350)
T d1xgka_ 159 PYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQKWNGHRIALTFETLSPVQVCAAFSRALNRR 237 (350)
T ss_dssp SCSSCBEEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHHHCHHHHTTCEEEECSEEECHHHHHHHHHHHHTSC
T ss_pred ccccccccccccccceeeecccCCCcceEEEeHHHHHHHHHHHHhCChhhcCCeEEEEeCCcCCHHHHHHHHHHHHCCc
Confidence 000 111 123444566775 899999999997643 46899999976679999999999999975
|
| >d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Escherichia coli [TaxId: 562]
Probab=99.87 E-value=2.2e-21 Score=177.07 Aligned_cols=203 Identities=19% Similarity=0.146 Sum_probs=143.3
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcch-------hhhhcCCCcEEeecCCCCHHHHHHHhc--CccEEEEC
Q 021928 99 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-------AMESFGTYVESMAGDASNKKFLKTALR--GVRSIICP 169 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~-------~~~~~~~~v~~v~~D~~d~~~~~~~~~--~~d~Vi~~ 169 (305)
|+||||||+||||++|+++|+++|++|++++|.... .......+++++++|+.|.+.+.++++ ++|+|||+
T Consensus 1 MKiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~ViHl 80 (338)
T d1udca_ 1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIHF 80 (338)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHTTCSEEEEC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHhhcCCCCEEEEeecCCHHHHHHHHhccCCCEEEEC
Confidence 689999999999999999999999999999763222 111234579999999999999999998 78999998
Q ss_pred Ccc----------------------hHhhhhhhcCCCEEEEEcccccccCCCCc---------ccccchHHHHHHHHHHH
Q 021928 170 SEG----------------------FISNAGSLKGVQHVILLSQLSVYRGSGGI---------QALMKGNARKLAEQDES 218 (305)
Q Consensus 170 ~~g----------------------~~~~~a~~~gv~~~V~iSS~~~~~~~~~~---------~~~~~~~~~~~~~~aE~ 218 (305)
++. .+.+++++.++++||++||..+|...... .+...|.. .|..+|.
T Consensus 81 Aa~~~~~~~~~~~~~~~~~Nv~gt~nlL~~~~~~~v~~~i~~Ss~~vy~~~~~~~~~e~~~~~~p~~~Y~~--sK~~~e~ 158 (338)
T d1udca_ 81 AGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVYGDQPKIPYVESFPTGTPQSPYGK--SKLMVEQ 158 (338)
T ss_dssp CSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCCSSSBCTTSCCCCCSSHHHH--HHHHHHH
T ss_pred CCccchhhHHhCHHHHHHhHHHHHHHHHHHHHHhCCCEEEecCcceEEccccccccccccccCCCcchHHH--HHhhhhH
Confidence 431 14567888999999999999988532211 11111222 2334555
Q ss_pred HHH-----hCCCCEEEEecCCcccCCC-------------------------CCcceee-ec------CCCCCCccCHHH
Q 021928 219 MLM-----ASGIPYTIIRTGVLQNTPG-------------------------GKQGFQF-EE------GCAANGSLSKED 261 (305)
Q Consensus 219 ~l~-----~~gi~~tilRPg~l~~~~~-------------------------~~~~~~~-~~------~~~~~~~Is~~D 261 (305)
++. ..+++++++||+.+.+... ....+.+ +. +.....+++++|
T Consensus 159 ~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~i~g~~~~~~~g~~~rd~i~v~D 238 (338)
T d1udca_ 159 ILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMD 238 (338)
T ss_dssp HHHHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCSSSTTSSCEECEEEHHH
T ss_pred HHHHHHhhccCCeEEEEeeccEEeccCCCCCCCCccccHHHHHHHHHHHHhcCCCCEEEeCCCcccCCCCceeeEEEEee
Confidence 444 2589999999988543210 0111111 11 223356899999
Q ss_pred HHHHHHHHhhC--CCCCCcEEEEecCC-cCHHHHHHHHHHhhhhc
Q 021928 262 AAFICVEALES--IPQTGLIFEVVNGE-EKVSDWKKCFSRLMEKT 303 (305)
Q Consensus 262 vA~~iv~~l~~--~~~~~~~~~v~~g~-~s~~d~~~~~~~l~~~~ 303 (305)
++.++..+... ....+++||++++. .++.++++.+.++.+..
T Consensus 239 ~~~~~~~~~~~~~~~~~~~i~Ni~~~~~~si~e~~~~i~~~~g~~ 283 (338)
T d1udca_ 239 LADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGKP 283 (338)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEEESCSSCEEHHHHHHHHHHHHTSC
T ss_pred hhhhccccccccccccCcceeeecCCCCCcHHHHHHHHHHHHCCC
Confidence 99888776653 33446899999866 68999999999998754
|
| >d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-glucuronate decarboxylase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.87 E-value=3.6e-22 Score=180.71 Aligned_cols=203 Identities=12% Similarity=0.096 Sum_probs=136.4
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEECCcc-----
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG----- 172 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~g----- 172 (305)
+|+||||||+||||++++++|+++|++|++++|......+..........+|+.|.+.++.++.++|+|||+++.
T Consensus 1 kKKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~VihlAa~~~~~~ 80 (312)
T d2b69a1 1 RKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPLYIEVDQIYHLASPASPPN 80 (312)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGTTCTTEEEEECCTTSCCCCCCSEEEECCSCCSHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCHHHHHHhcCCCceEEEehHHHHHHHcCCCEEEECcccCCchh
Confidence 489999999999999999999999999999987433221111111222233443334445667789999988431
Q ss_pred -----------------hHhhhhhhcCCCEEEEEcccccccCCCCc----------ccccch-HHHHHHHHHHHHH----
Q 021928 173 -----------------FISNAGSLKGVQHVILLSQLSVYRGSGGI----------QALMKG-NARKLAEQDESML---- 220 (305)
Q Consensus 173 -----------------~~~~~a~~~gv~~~V~iSS~~~~~~~~~~----------~~~~~~-~~~~~~~~aE~~l---- 220 (305)
.+.+++++.++ ++|++||..+|...... .++.+. .....|..+|.++
T Consensus 81 ~~~~~~~~~~~Nv~g~~~ll~~~~~~~~-k~I~~SS~~vy~~~~~~~~~e~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~ 159 (312)
T d2b69a1 81 YMYNPIKTLKTNTIGTLNMLGLAKRVGA-RLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYM 159 (312)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHHHHHHTC-EEEEEEEGGGGBSCSSSSBCTTCCCBCCSSSTTHHHHHHHHHHHHHHHHHH
T ss_pred HHhCHHHHHHHHHHHHHHHHHHHHHcCC-cEEEEEChheecCCCCCCCCccccCCCCCCCCccHHHHHHHHHHHHHHHHH
Confidence 14456777787 89999999998642111 011111 1222344556555
Q ss_pred HhCCCCEEEEecCCcccCCC----------------CCccee-eecCCCCCCccCHHHHHHHHHHHhhCCCCCCcEEEEe
Q 021928 221 MASGIPYTIIRTGVLQNTPG----------------GKQGFQ-FEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVV 283 (305)
Q Consensus 221 ~~~gi~~tilRPg~l~~~~~----------------~~~~~~-~~~~~~~~~~Is~~DvA~~iv~~l~~~~~~~~~~~v~ 283 (305)
+..+++++++||+.+.+... .++.+. ++.+.....+++++|+++++..+++.. .+..||++
T Consensus 160 ~~~~~~~~~lR~~~vyGp~~~~~~~~~i~~~i~~~~~g~~i~i~~~g~~~r~~i~v~D~~~~~~~~~~~~--~~~~~n~~ 237 (312)
T d2b69a1 160 KQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSN--VSSPVNLG 237 (312)
T ss_dssp HHHCCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHHHHHHHHHTSS--CCSCEEES
T ss_pred HHhCCcEEEEEeeeEECCCCCCCCccHHHHHHHHHHcCCCeEEeCCCCeeEccEEHHHHHHHHHHHHhhc--cCCceEec
Confidence 45699999999999664221 112222 245556678999999999999888654 35689999
Q ss_pred cCC-cCHHHHHHHHHHhhhhc
Q 021928 284 NGE-EKVSDWKKCFSRLMEKT 303 (305)
Q Consensus 284 ~g~-~s~~d~~~~~~~l~~~~ 303 (305)
++. .++.++.+.+.++.+..
T Consensus 238 ~~~~~~~~~~~~~i~~~~~~~ 258 (312)
T d2b69a1 238 NPEEHTILEFAQLIKNLVGSG 258 (312)
T ss_dssp CCCEEEHHHHHHHHHHHHTCC
T ss_pred CCcccchhhHHHHHHHHhCCC
Confidence 876 48999999999988764
|
| >d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-N-acetylglucosamine 4-epimerase WbpP species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.87 E-value=8.6e-21 Score=173.00 Aligned_cols=207 Identities=14% Similarity=0.069 Sum_probs=151.0
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcch-------h----hhhcCCCcEEeecCCCCHHHHHHHhcCc
Q 021928 95 PEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-------A----MESFGTYVESMAGDASNKKFLKTALRGV 163 (305)
Q Consensus 95 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~-------~----~~~~~~~v~~v~~D~~d~~~~~~~~~~~ 163 (305)
..++|+|||||||||||++|+++|++.||+|++++|.... . .......++++.+|+.|.........+.
T Consensus 13 ~~~~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~ 92 (341)
T d1sb8a_ 13 PAQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGV 92 (341)
T ss_dssp HHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTTC
T ss_pred CCCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeeccccccccccccccc
Confidence 3456899999999999999999999999999999874321 0 0111246899999999999999999999
Q ss_pred cEEEECCc--c--------------------hHhhhhhhcCCCEEEEEcccccccCCCC--------cccccchHHHHHH
Q 021928 164 RSIICPSE--G--------------------FISNAGSLKGVQHVILLSQLSVYRGSGG--------IQALMKGNARKLA 213 (305)
Q Consensus 164 d~Vi~~~~--g--------------------~~~~~a~~~gv~~~V~iSS~~~~~~~~~--------~~~~~~~~~~~~~ 213 (305)
+.|++++. . .+.++|++.++++||++||..+|..... ..+...|. ..|
T Consensus 93 ~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~--~sK 170 (341)
T d1sb8a_ 93 DYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTYGDHPGLPKVEDTIGKPLSPYA--VTK 170 (341)
T ss_dssp SEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSHHH--HHH
T ss_pred cccccccccccccccccCccchhheeehhHHHHHHHHHhcCCceEEEcccceeeCCCCCCCccCCCCCCCCCcch--HHH
Confidence 99997722 1 1456788899999999999999863221 11222222 234
Q ss_pred HHHHHHHH----hCCCCEEEEecCCcccCCC---C---------------Ccce-eeecCCCCCCccCHHHHHHHHHHHh
Q 021928 214 EQDESMLM----ASGIPYTIIRTGVLQNTPG---G---------------KQGF-QFEEGCAANGSLSKEDAAFICVEAL 270 (305)
Q Consensus 214 ~~aE~~l~----~~gi~~tilRPg~l~~~~~---~---------------~~~~-~~~~~~~~~~~Is~~DvA~~iv~~l 270 (305)
..+|.+++ ..+++++++||+.+.+... . ++.+ .++.+.....+++++|+|.++..++
T Consensus 171 ~~~E~~~~~~~~~~~i~~~ilR~~~v~G~~~~~~~~~~~~i~~~~~~~~~g~~i~~~g~g~~~r~~i~v~D~~~a~~~~~ 250 (341)
T d1sb8a_ 171 YVNELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQANLLAA 250 (341)
T ss_dssp HHHHHHHHHHHHHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCeEEEEeceeeccCcCCCCchhhhHHHHHHHHHcCCceEEcCCCCEEEEEEEEeccchhhhhhh
Confidence 44565543 4689999999997543211 0 1112 2345566688999999999999998
Q ss_pred hCCC-CCCcEEEEecCC-cCHHHHHHHHHHhhhhc
Q 021928 271 ESIP-QTGLIFEVVNGE-EKVSDWKKCFSRLMEKT 303 (305)
Q Consensus 271 ~~~~-~~~~~~~v~~g~-~s~~d~~~~~~~l~~~~ 303 (305)
..+. ..+..|++.++. .++.++++.+.+..+..
T Consensus 251 ~~~~~~~~~~~~~~~~~~~si~~i~~~i~~~~~~~ 285 (341)
T d1sb8a_ 251 TAGLDARNQVYNIAVGGRTSLNQLFFALRDGLAEN 285 (341)
T ss_dssp TCCGGGCSEEEEESCSCCEEHHHHHHHHHHHHHHT
T ss_pred hccccccceeeeecccccchHHHHHHHHHHHhccc
Confidence 7654 467899999865 58999999999887754
|
| >d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptomyces venezuelae [TaxId: 54571]
Probab=99.87 E-value=2.6e-21 Score=175.23 Aligned_cols=202 Identities=16% Similarity=0.127 Sum_probs=146.0
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCCeEEE------EEcCc--ch---hhh-hcCCCcEEeecCCCCHHHHHHHhcCccEE
Q 021928 99 DAVLVTDGDSDIGQMVILSLIVKRTRIKA------LVKDK--RN---AME-SFGTYVESMAGDASNKKFLKTALRGVRSI 166 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~------~~R~~--~~---~~~-~~~~~v~~v~~D~~d~~~~~~~~~~~d~V 166 (305)
|+||||||+||||++++++|+++|++|.. +++.. .. ... ....+++++.+|+.+.........+.|.|
T Consensus 1 MkIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~v 80 (322)
T d1r6da_ 1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLARELRGVDAI 80 (322)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHHHHTTTCCEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccHhHhhhhhcCCCeEEEEeccccchhhhccccccceE
Confidence 68999999999999999999999986544 32211 11 111 12347899999999999999999999999
Q ss_pred EECCcc----------------------hHhhhhhhcCCCEEEEEcccccccCCCC--------cccccchHHHHHHHHH
Q 021928 167 ICPSEG----------------------FISNAGSLKGVQHVILLSQLSVYRGSGG--------IQALMKGNARKLAEQD 216 (305)
Q Consensus 167 i~~~~g----------------------~~~~~a~~~gv~~~V~iSS~~~~~~~~~--------~~~~~~~~~~~~~~~a 216 (305)
+|++.. .+.+++.+.++++||++||..+|..... ..+...| ...|..+
T Consensus 81 i~~a~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~I~~Ss~~~yg~~~~~~~~E~~~~~p~~~Y--~~sK~~~ 158 (322)
T d1r6da_ 81 VHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVYGSIDSGSWTESSPLEPNSPY--AASKAGS 158 (322)
T ss_dssp EECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGCCCSSSCBCTTSCCCCCSHH--HHHHHHH
T ss_pred EeecccccccccccchHHHhhhhHHHHHHHHHHHHHcCCceEEEeecceeecCCCCCCCCCCCCCCCCCHH--HHHHHHH
Confidence 987321 1455677889999999999999864221 1122222 2234445
Q ss_pred HHHH----HhCCCCEEEEecCCcccCCC--------------CCcceee-ecCCCCCCccCHHHHHHHHHHHhhCCCCCC
Q 021928 217 ESML----MASGIPYTIIRTGVLQNTPG--------------GKQGFQF-EEGCAANGSLSKEDAAFICVEALESIPQTG 277 (305)
Q Consensus 217 E~~l----~~~gi~~tilRPg~l~~~~~--------------~~~~~~~-~~~~~~~~~Is~~DvA~~iv~~l~~~~~~~ 277 (305)
|.++ ++.+++++++||+.+++... .++.+.+ +.+.....+++++|+|+++..+++++.. +
T Consensus 159 E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~i~~~i~~~~~~~~i~v~~~g~~~r~~i~v~D~a~ai~~~~~~~~~-~ 237 (322)
T d1r6da_ 159 DLVARAYHRTYGLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALVLAGGRA-G 237 (322)
T ss_dssp HHHHHHHHHHHCCCEEEEEECEEECTTCCTTSHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHHCCT-T
T ss_pred HHHHHHHHHHhCCCEEEEEeeeEECcCCCcCcHHHHHHHHHHcCCCcEEecCCCeEEccEEHHHHHHHHHHHHhCCCC-C
Confidence 5544 45799999999999654221 1233332 4556667899999999999999987654 6
Q ss_pred cEEEEecCC-cCHHHHHHHHHHhhhhc
Q 021928 278 LIFEVVNGE-EKVSDWKKCFSRLMEKT 303 (305)
Q Consensus 278 ~~~~v~~g~-~s~~d~~~~~~~l~~~~ 303 (305)
++||+++++ .++.++++.+.+..+..
T Consensus 238 ~~~ni~~~~~~s~~e~~~~i~~~~~~~ 264 (322)
T d1r6da_ 238 EIYHIGGGLELTNRELTGILLDSLGAD 264 (322)
T ss_dssp CEEEECCCCEEEHHHHHHHHHHHHTCC
T ss_pred CeeEEeecccchhHHHHHHHHHHhCCC
Confidence 899999877 48999999999988754
|
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=99.86 E-value=5.7e-21 Score=176.24 Aligned_cols=201 Identities=11% Similarity=0.057 Sum_probs=141.8
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcch------hhhhc-CCCcEEeecCCCCHHHHHHHhcC--ccEEEEC
Q 021928 99 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN------AMESF-GTYVESMAGDASNKKFLKTALRG--VRSIICP 169 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~------~~~~~-~~~v~~v~~D~~d~~~~~~~~~~--~d~Vi~~ 169 (305)
|+||||||+||||++|+++|++.|++|++..++... ..... ..+++++.+|++|.+.+.+++++ +|+|||+
T Consensus 1 MkILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~Vihl 80 (361)
T d1kewa_ 1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQYQPDAVMHL 80 (361)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCccccHHHHHhhhhcCCcEEEEccCCCHHHHHHHHHhCCCCEEEEC
Confidence 689999999999999999999999987766554321 11111 24799999999999999998875 6999998
Q ss_pred Ccc----------------------hHhhhhhhc---------CCCEEEEEcccccccCCCCc-----------------
Q 021928 170 SEG----------------------FISNAGSLK---------GVQHVILLSQLSVYRGSGGI----------------- 201 (305)
Q Consensus 170 ~~g----------------------~~~~~a~~~---------gv~~~V~iSS~~~~~~~~~~----------------- 201 (305)
++. .+.++|.+. ++++||++||..+|......
T Consensus 81 Aa~~~~~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~e~~~ 160 (361)
T d1kewa_ 81 AAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTA 160 (361)
T ss_dssp CSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBCTTSC
T ss_pred ccccchhhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceeeCCCccCCccccccCCCCcccCCC
Confidence 431 023344443 45699999999998632110
Q ss_pred -ccccchHHHHHHHHHHHHHH----hCCCCEEEEecCCcccCCC--------------CCccee-eecCCCCCCccCHHH
Q 021928 202 -QALMKGNARKLAEQDESMLM----ASGIPYTIIRTGVLQNTPG--------------GKQGFQ-FEEGCAANGSLSKED 261 (305)
Q Consensus 202 -~~~~~~~~~~~~~~aE~~l~----~~gi~~tilRPg~l~~~~~--------------~~~~~~-~~~~~~~~~~Is~~D 261 (305)
.+...| ...|..+|.+++ ..+++++++||+.+.+... .++.+. ++.+.....+++++|
T Consensus 161 ~~p~s~Y--g~sK~~~E~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~~~i~~~i~~~~~g~~~~v~g~g~~~r~~i~v~D 238 (361)
T d1kewa_ 161 YAPSSPY--SASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVED 238 (361)
T ss_dssp CCCCSHH--HHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTTSHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHH
T ss_pred CCCCCHH--HHHHHHHHHHHHHHHHHhCCCEEEEecCceECcCCCcCcHHHHHHHHHHcCCCcEEeCCCCeEEeCEEHHH
Confidence 111112 223455666654 4799999999998554221 122333 345566678999999
Q ss_pred HHHHHHHHhhCCCCCCcEEEEecCC-cCHHHHHHHHHHhhhh
Q 021928 262 AAFICVEALESIPQTGLIFEVVNGE-EKVSDWKKCFSRLMEK 302 (305)
Q Consensus 262 vA~~iv~~l~~~~~~~~~~~v~~g~-~s~~d~~~~~~~l~~~ 302 (305)
+|+++..+++++.. +.+|||+++. .++.|+++.+.+..+.
T Consensus 239 ~a~ai~~~~~~~~~-~~~~Ni~s~~~~s~~~~~~~i~~~~~~ 279 (361)
T d1kewa_ 239 HARALHMVVTEGKA-GETYNIGGHNEKKNLDVVFTICDLLDE 279 (361)
T ss_dssp HHHHHHHHHHHCCT-TCEEEECCCCEEEHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCC-CCeEEECCCCCcchHHHHhHhhhhccc
Confidence 99999999987654 6799999876 5889998888776543
|
| >d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Polymyxin resistance protein ArnA (PrmI) species: Escherichia coli [TaxId: 562]
Probab=99.86 E-value=2e-20 Score=170.33 Aligned_cols=204 Identities=13% Similarity=0.052 Sum_probs=142.6
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcchhhhhc-CCCcEEeecCCCCHHHHH-HHhcCccEEEECCc--c-
Q 021928 99 DAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESF-GTYVESMAGDASNKKFLK-TALRGVRSIICPSE--G- 172 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~-~~~v~~v~~D~~d~~~~~-~~~~~~d~Vi~~~~--g- 172 (305)
|+||||||+||||++++++|+++|+ +|+++++......... .++++++.+|+++.+.+. .+++++|+|||+++ .
T Consensus 1 MKILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~~~~~~~~i~~Di~~~~~~~~~~~~~~d~Vih~a~~~~~ 80 (342)
T d2blla1 1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLVAIATP 80 (342)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTCSHHHHHHHHHCSEEEECBCCCCH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhccCCCeEEEECccCChHHHHHHHHhCCCccccccccccc
Confidence 6899999999999999999999994 8999988665433332 357999999998865554 47788999999832 1
Q ss_pred -------------------hHhhhhhhcCCCEEEEEcccccccCCCCcc-----------c-ccc-hHHHHHHHHHHHHH
Q 021928 173 -------------------FISNAGSLKGVQHVILLSQLSVYRGSGGIQ-----------A-LMK-GNARKLAEQDESML 220 (305)
Q Consensus 173 -------------------~~~~~a~~~gv~~~V~iSS~~~~~~~~~~~-----------~-~~~-~~~~~~~~~aE~~l 220 (305)
.+.+++.+.++ +++++||..+|....... . ..+ ......|..+|.++
T Consensus 81 ~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~-~~~~~ss~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~ 159 (342)
T d2blla1 81 IEYTRNPLRVFELDFEENLRIIRYCVKYRK-RIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVI 159 (342)
T ss_dssp HHHHHSHHHHHHHHTHHHHHHHHHHHHTTC-EEEEECCGGGGBTCCCSSBCTTTCCCBCCCTTCGGGHHHHHHHHHHHHH
T ss_pred cccccCCccccccccccccccccccccccc-cccccccccccccccccccccccccccccccCCCcchhhhcccchhhhh
Confidence 03455666776 456788877765321110 0 001 11222355566665
Q ss_pred H----hCCCCEEEEecCCcccCC-C---------------------CCccee-eecCCCCCCccCHHHHHHHHHHHhhCC
Q 021928 221 M----ASGIPYTIIRTGVLQNTP-G---------------------GKQGFQ-FEEGCAANGSLSKEDAAFICVEALESI 273 (305)
Q Consensus 221 ~----~~gi~~tilRPg~l~~~~-~---------------------~~~~~~-~~~~~~~~~~Is~~DvA~~iv~~l~~~ 273 (305)
. ..+++++++||..+.... . .++.+. ++.+.....+++++|+|+++..+++++
T Consensus 160 ~~~~~~~~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~r~~i~v~D~~~a~~~~~~~~ 239 (342)
T d2blla1 160 WAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRIIENA 239 (342)
T ss_dssp HHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEHHHHHHHHHHHHHCG
T ss_pred hhhhcccCceeEEeeccccccccccccccccccccccchHHHHHHHhCCCccccCCCCeeeeecccccccceeeeehhhc
Confidence 4 468999999998855321 0 012222 344566678999999999999999875
Q ss_pred C--CCCcEEEEecCC--cCHHHHHHHHHHhhhhc
Q 021928 274 P--QTGLIFEVVNGE--EKVSDWKKCFSRLMEKT 303 (305)
Q Consensus 274 ~--~~~~~~~v~~g~--~s~~d~~~~~~~l~~~~ 303 (305)
. ..+++||+++++ .++.++++.+.++.+..
T Consensus 240 ~~~~~g~~~Nig~~~~~~t~~~l~~~i~~~~~~~ 273 (342)
T d2blla1 240 GNRCDGEIINIGNPENEASIEELGEMLLASFEKH 273 (342)
T ss_dssp GGTTTTEEEEECCTTSEEEHHHHHHHHHHHHHTC
T ss_pred cccCCCeEEEEecccchhHHHHHHHHHHHHhCCC
Confidence 3 457899998754 48999999999988754
|
| >d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=99.85 E-value=2.3e-20 Score=170.60 Aligned_cols=203 Identities=14% Similarity=0.110 Sum_probs=144.4
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcc-------hhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEECC
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR-------NAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS 170 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~-------~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~ 170 (305)
+|+|||||||||||++|+++|+++|++|.++.++.. ........+++++.+|+.|.+.+..++.+++.|+|.+
T Consensus 2 ~mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~Di~d~~~~~~~~~~~~~v~~~a 81 (346)
T d1oc2a_ 2 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKLAAKADAIVHYA 81 (346)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHHHHTTCSEEEECC
T ss_pred cCEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccHHHHHHhhcCCeEEEEccCCCHHHHHHHHhhhhhhhhhh
Confidence 699999999999999999999999998776655421 1222345689999999999999999999999999873
Q ss_pred cc----------------------hHhhhhhhcCCCEEEEEcccccccCCC--------------------CcccccchH
Q 021928 171 EG----------------------FISNAGSLKGVQHVILLSQLSVYRGSG--------------------GIQALMKGN 208 (305)
Q Consensus 171 ~g----------------------~~~~~a~~~gv~~~V~iSS~~~~~~~~--------------------~~~~~~~~~ 208 (305)
.. .+.+++...+. ++|++||..+|.... ...+...|
T Consensus 82 ~~~~~~~~~~~~~~~~~~N~~g~~nll~~~~~~~~-k~i~~ss~~vyg~~~~~~~~~~~~~~~~~~~~e~~~~~p~s~Y- 159 (346)
T d1oc2a_ 82 AESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDI-RFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPY- 159 (346)
T ss_dssp SCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTSCCCCCSHH-
T ss_pred hcccccchhhCcccceeeehHhHHhhhhhhccccc-cccccccceEecccCccccccccccCcccccccCCCCCCCCHH-
Confidence 21 03344566664 788998888874210 00111112
Q ss_pred HHHHHHHHHHHH----HhCCCCEEEEecCCcccCCC---------------CCcceeeecCCCCCCccCHHHHHHHHHHH
Q 021928 209 ARKLAEQDESML----MASGIPYTIIRTGVLQNTPG---------------GKQGFQFEEGCAANGSLSKEDAAFICVEA 269 (305)
Q Consensus 209 ~~~~~~~aE~~l----~~~gi~~tilRPg~l~~~~~---------------~~~~~~~~~~~~~~~~Is~~DvA~~iv~~ 269 (305)
...|..+|.++ ++.+++++++||+.+.+... +.....++.+.....+++++|+|++++.+
T Consensus 160 -~~sK~~~E~~~~~~~~~~~i~~~ilR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~i~~~g~~~r~~i~v~D~a~a~~~~ 238 (346)
T d1oc2a_ 160 -SSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGVWAI 238 (346)
T ss_dssp -HHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCTTSHHHHHHHHHHHTCCCEEETTSCCEEECEEHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHHHHHHcCCCEEEEeecceeCCCCCccchhHHHHHHHHcCCceeEeCCCCccccccchhhHHHHHHHH
Confidence 22344556555 45799999999998664211 12223345566778899999999999988
Q ss_pred hhCCCCCCcEEEEecCC-cCHHHHHHHHHHhhhhcC
Q 021928 270 LESIPQTGLIFEVVNGE-EKVSDWKKCFSRLMEKTG 304 (305)
Q Consensus 270 l~~~~~~~~~~~v~~g~-~s~~d~~~~~~~l~~~~~ 304 (305)
++++.. +..|++.+++ .+..++++.+.+..+.+.
T Consensus 239 ~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 273 (346)
T d1oc2a_ 239 LTKGRM-GETYLIGADGEKNNKEVLELILEKMGQPK 273 (346)
T ss_dssp HHHCCT-TCEEEECCSCEEEHHHHHHHHHHHTTCCT
T ss_pred Hhhccc-CccccccccccccchHHHHHHHHHhCCCC
Confidence 876554 5678888765 588999999888887653
|
| >d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Aldehyde reductase II species: Sporobolomyces salmonicolor [TaxId: 5005]
Probab=99.84 E-value=1.3e-20 Score=172.30 Aligned_cols=202 Identities=11% Similarity=0.037 Sum_probs=137.5
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh--------cCCCcEEeecCCCCHHHHHHHhcCccEEEE
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES--------FGTYVESMAGDASNKKFLKTALRGVRSIIC 168 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~--------~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~ 168 (305)
.+++||||||+||||++|+++|+++|++|++++|+.++.... .......+.+|+.|.+++.+++.++|.|++
T Consensus 10 ~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~v~~ 89 (342)
T d1y1pa1 10 EGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAGVAH 89 (342)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSEEEE
T ss_pred CcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHHHhhhccccccccEEEeccccchhhhhhhcccchhhhh
Confidence 359999999999999999999999999999999987553211 123345688999999999999999999998
Q ss_pred CCcc-------------------hHhhhhhh-cCCCEEEEEcccccccCCC----------------------------C
Q 021928 169 PSEG-------------------FISNAGSL-KGVQHVILLSQLSVYRGSG----------------------------G 200 (305)
Q Consensus 169 ~~~g-------------------~~~~~a~~-~gv~~~V~iSS~~~~~~~~----------------------------~ 200 (305)
.+.. .+.+++.+ .++++||++||..+..... .
T Consensus 90 ~a~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~~~i~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~ 169 (342)
T d1y1pa1 90 IASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPESDP 169 (342)
T ss_dssp CCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHHHHHSCTTST
T ss_pred hcccccccccccccccchhhhHHHHHHhhhcccccccccccccceeeccCCCCCCCccccccccccccccccccccccCC
Confidence 7321 13445555 4799999999976532100 0
Q ss_pred cccccchHHHHHHHHHHH----HHHhC--CCCEEEEecCCcccCC-C----------------CCcceeeecCCCCCCcc
Q 021928 201 IQALMKGNARKLAEQDES----MLMAS--GIPYTIIRTGVLQNTP-G----------------GKQGFQFEEGCAANGSL 257 (305)
Q Consensus 201 ~~~~~~~~~~~~~~~aE~----~l~~~--gi~~tilRPg~l~~~~-~----------------~~~~~~~~~~~~~~~~I 257 (305)
..+...| ...|..+|. +.++. +++++++||+.+.+.. . .++......+.....++
T Consensus 170 ~~p~~~Y--~~sK~~~E~~~~~~~~~~~~~~~~~~i~p~~v~Gp~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~v 247 (342)
T d1y1pa1 170 QKSLWVY--AASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPALALMPPQYYV 247 (342)
T ss_dssp THHHHHH--HHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTTCCCHHHHTCCSEEEE
T ss_pred CCCcCcc--cchhHhHHHHHHHhhhhcccccccceecccceeCCCCCccccccchHHHHHHHHcCCcCcccCCccceeee
Confidence 0111112 122334444 44443 5778889998744321 1 01111112334446789
Q ss_pred CHHHHHHHHHHHhhCCCCCCcEEEEecCCcCHHHHHHHHHHhh
Q 021928 258 SKEDAAFICVEALESIPQTGLIFEVVNGEEKVSDWKKCFSRLM 300 (305)
Q Consensus 258 s~~DvA~~iv~~l~~~~~~~~~~~v~~g~~s~~d~~~~~~~l~ 300 (305)
+++|+|++++.+++++...+..|...++..+++|+++++.+..
T Consensus 248 ~v~Dva~~~i~~l~~~~~~g~~~~~~~~~~t~~eia~~i~k~~ 290 (342)
T d1y1pa1 248 SAVDIGLLHLGCLVLPQIERRRVYGTAGTFDWNTVLATFRKLY 290 (342)
T ss_dssp EHHHHHHHHHHHHHCTTCCSCEEEECCEEECHHHHHHHHHHHC
T ss_pred eHHHHHHHHHHhhcCccccceEEEEcCCceEHHHHHHHHHHHc
Confidence 9999999999999988877776644445579999999998874
|
| >d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.84 E-value=6.8e-20 Score=167.47 Aligned_cols=204 Identities=16% Similarity=0.113 Sum_probs=142.1
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcch-------hhhhcCCCcEEeecCCCCHHHHHHHhc--CccEEEEC
Q 021928 99 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-------AMESFGTYVESMAGDASNKKFLKTALR--GVRSIICP 169 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~-------~~~~~~~~v~~v~~D~~d~~~~~~~~~--~~d~Vi~~ 169 (305)
|.||||||+||||++|+++|+++|++|+++++.... .......+++++.+|+.|.+.+.+++. ++|+|||+
T Consensus 2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vihl 81 (347)
T d1z45a2 2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEYKIDSVIHF 81 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHSCCCEEEEC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhHHhhcccCCeEEEeecCCHHHHHHHHhccCCCEEEEc
Confidence 679999999999999999999999999998764321 122234679999999999999999887 78999998
Q ss_pred Ccc----------------------hHhhhhhhcCCCEEEEEcccccccCCCC------------cccccchHHHHHHHH
Q 021928 170 SEG----------------------FISNAGSLKGVQHVILLSQLSVYRGSGG------------IQALMKGNARKLAEQ 215 (305)
Q Consensus 170 ~~g----------------------~~~~~a~~~gv~~~V~iSS~~~~~~~~~------------~~~~~~~~~~~~~~~ 215 (305)
++. .+.+++++.++++||++||..+|..... ..+... +...|..
T Consensus 82 Aa~~~~~~~~~~~~~~~~~N~~~t~~ll~~~~~~~i~~~i~~SS~~vyg~~~~~~~~~~~~e~~~~~p~~~--Y~~sK~~ 159 (347)
T d1z45a2 82 AGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSSATVYGDATRFPNMIPIPEECPLGPTNP--YGHTKYA 159 (347)
T ss_dssp CSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCCGGGSTTCCSBCTTSCCCCCSH--HHHHHHH
T ss_pred cccccccccccCcccccccchhhhHHHHHHHHhcccceEEeecceeeecCcccCCCCCccccccCCCCCCh--hHhHHHH
Confidence 431 1456688899999999999999863211 111111 2333555
Q ss_pred HHHHHHh------CCCCEEEEecCCcccC-CC------------------------CCccee-eec------CCCCCCcc
Q 021928 216 DESMLMA------SGIPYTIIRTGVLQNT-PG------------------------GKQGFQ-FEE------GCAANGSL 257 (305)
Q Consensus 216 aE~~l~~------~gi~~tilRPg~l~~~-~~------------------------~~~~~~-~~~------~~~~~~~I 257 (305)
+|+++++ .+++++++||+.+.+. +. ..+.+. ++. +.....++
T Consensus 160 ~E~~~~~~~~~~~~~~~~~~lR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~~~~~~~~~d~~ 239 (347)
T d1z45a2 160 IENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGTPIRDYI 239 (347)
T ss_dssp HHHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC------CCSSCEECEE
T ss_pred HHHHHHHHHHhhccCCcEEEEeecceEeecCCCccCCCccccHHHHHHHHHHHHhcCCCCeEEeCCCccccCCceeeeee
Confidence 6765542 5789999998764321 10 001111 111 11234577
Q ss_pred CHHHHHHHHHHHhhC------CCCCCcEEEEecCC-cCHHHHHHHHHHhhhhcC
Q 021928 258 SKEDAAFICVEALES------IPQTGLIFEVVNGE-EKVSDWKKCFSRLMEKTG 304 (305)
Q Consensus 258 s~~DvA~~iv~~l~~------~~~~~~~~~v~~g~-~s~~d~~~~~~~l~~~~~ 304 (305)
+..|++.+++.+++. +...+++||+++++ .++.++++.+.++.+...
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ni~~~~~~s~~e~~~~i~~~~~~~~ 293 (347)
T d1z45a2 240 HVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKASGIDL 293 (347)
T ss_dssp EHHHHHHHHHHHHHHHHHSCTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTCCC
T ss_pred eeecccccccccccccccccccccccccceecCCCcccHHHHHHHHHHHHCCCC
Confidence 888899888887753 22346899998866 489999999999987653
|
| >d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.84 E-value=6.1e-20 Score=165.35 Aligned_cols=200 Identities=12% Similarity=-0.023 Sum_probs=139.4
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchh----hhh--cCCCcEEeecCCCCHHHHHHHhcCc--cEEEECC
Q 021928 99 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA----MES--FGTYVESMAGDASNKKFLKTALRGV--RSIICPS 170 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~----~~~--~~~~v~~v~~D~~d~~~~~~~~~~~--d~Vi~~~ 170 (305)
|+|||||||||||++|+++|+++||+|++++|..... .+. ..++++++.+|+.|.+.+.+.+... +++++++
T Consensus 1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~~~a 80 (321)
T d1rpna_ 1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKAQPQEVYNLA 80 (321)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcccHHHHHHhcccCCcEEEEccccChHHhhhhhcccccccccccc
Confidence 6899999999999999999999999999999975431 111 2347899999999999999888754 5666652
Q ss_pred cc----------------------hHhhhhhhcCCC-EEEEEcccccccCCCC--------cccccchHHHHHHHHHHHH
Q 021928 171 EG----------------------FISNAGSLKGVQ-HVILLSQLSVYRGSGG--------IQALMKGNARKLAEQDESM 219 (305)
Q Consensus 171 ~g----------------------~~~~~a~~~gv~-~~V~iSS~~~~~~~~~--------~~~~~~~~~~~~~~~aE~~ 219 (305)
.. .+.+++++.+++ +|++.||..++..... ..+...| ...|..+|.+
T Consensus 81 ~~~~~~~~~~~~~~~~~~n~~g~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~E~~~~~p~~~Y--~~sK~~~E~~ 158 (321)
T d1rpna_ 81 AQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQAERQDENTPFYPRSPY--GVAKLYGHWI 158 (321)
T ss_dssp SCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHH--HHHHHHHHHH
T ss_pred ccccccccccchHHHHhhhhhchHHHHHHHHHhCCCcccccccchhhcCcccCCCCCCCCCccccChh--HHHHHHHHHH
Confidence 20 134556666655 7777777776642111 1111222 2234445554
Q ss_pred H----HhCCCCEEEEecCCcccCCC-------------------CCcceeeecCCCCCCccCHHHHHHHHHHHhhCCCCC
Q 021928 220 L----MASGIPYTIIRTGVLQNTPG-------------------GKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQT 276 (305)
Q Consensus 220 l----~~~gi~~tilRPg~l~~~~~-------------------~~~~~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~~~ 276 (305)
+ ...+++++++||+.+.+... ....+.++.++....+++++|+|++++.+++++.
T Consensus 159 ~~~~~~~~~~~~~~lr~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~i~~g~g~~~r~~i~v~D~~~~~~~~~~~~~-- 236 (321)
T d1rpna_ 159 TVNYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWLMLQQDK-- 236 (321)
T ss_dssp HHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHHHHHHHHHSSS--
T ss_pred HHHHHhhcCCcEEEEEEecccCCCccccccHHHHHHHHHHHHhCCCCcEEECCCCeEEccEEeHHHHHHHHHHHhcCC--
Confidence 4 45789999999987543211 1122234455566789999999999999998765
Q ss_pred CcEEEEecCC-cCHHHHHHHHHHhhhh
Q 021928 277 GLIFEVVNGE-EKVSDWKKCFSRLMEK 302 (305)
Q Consensus 277 ~~~~~v~~g~-~s~~d~~~~~~~l~~~ 302 (305)
+..|++++++ .++.++++.+.+..+.
T Consensus 237 ~~~~ni~~~~~~s~~~~~~~~~~~~~~ 263 (321)
T d1rpna_ 237 ADDYVVATGVTTTVRDMCQIAFEHVGL 263 (321)
T ss_dssp CCCEEECCSCEEEHHHHHHHHHHTTTC
T ss_pred cCCceecccccceehhhhHHHHHHhCC
Confidence 4579999866 5889999998887764
|
| >d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.84 E-value=8.4e-20 Score=166.55 Aligned_cols=205 Identities=17% Similarity=0.131 Sum_probs=140.6
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcch-------------hhhhcCCCcEEeecCCCCHHHHHHHhcCc
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-------------AMESFGTYVESMAGDASNKKFLKTALRGV 163 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~-------------~~~~~~~~v~~v~~D~~d~~~~~~~~~~~ 163 (305)
|.|+||||||+||||++|+++|+++|++|++++|.... .......+++++.+|++|.+.+.+++.+.
T Consensus 1 M~kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~ 80 (346)
T d1ek6a_ 1 MAEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKY 80 (346)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHC
T ss_pred CCCeEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHhcCCCcEEEEeecccccccccccccc
Confidence 45899999999999999999999999999999752111 11123457999999999999999988765
Q ss_pred --cEEEECCc--c--------------------hHhhhhhhcCCCEEEEEcccccccCCCCc---------ccccchHHH
Q 021928 164 --RSIICPSE--G--------------------FISNAGSLKGVQHVILLSQLSVYRGSGGI---------QALMKGNAR 210 (305)
Q Consensus 164 --d~Vi~~~~--g--------------------~~~~~a~~~gv~~~V~iSS~~~~~~~~~~---------~~~~~~~~~ 210 (305)
++++|+++ + .+.+++++.++++||++||..++...... ....+| .
T Consensus 81 ~~~~i~h~Aa~~~~~~~~~~p~~~~~~Nv~gt~~l~~~~~~~~v~~~i~~ss~~~~~~~~~~~~~~~~~~~~~~~~Y--~ 158 (346)
T d1ek6a_ 81 SFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPY--G 158 (346)
T ss_dssp CEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSSHH--H
T ss_pred ccccccccccccCcHhhHhCHHHHHHhhhcccccccchhhhcCcccccccccceeeeccccccccccccccccCChH--H
Confidence 46777633 1 14556788999999999999887642211 111112 2
Q ss_pred HHHHHHHHHHH-----hCCCCEEEEecCCcccCCC-------------------------CCcceee-e------cCCCC
Q 021928 211 KLAEQDESMLM-----ASGIPYTIIRTGVLQNTPG-------------------------GKQGFQF-E------EGCAA 253 (305)
Q Consensus 211 ~~~~~aE~~l~-----~~gi~~tilRPg~l~~~~~-------------------------~~~~~~~-~------~~~~~ 253 (305)
..+..+|..++ ..+++++++||+.+++... ....+.+ + .+...
T Consensus 159 ~~k~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~~~~g~~~ 238 (346)
T d1ek6a_ 159 KSKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGV 238 (346)
T ss_dssp HHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCE
T ss_pred HHHHHHHHHHHHHHHhccCCceEEEeecceeccCCCCCcCccccccHHHHHHHHHHHHHcCCCcEEEcCCcccCCCCCee
Confidence 22333444333 2589999999987543210 0111111 1 12223
Q ss_pred CCccCHHHHHHHHHHHhhCC--CCCCcEEEEecCC-cCHHHHHHHHHHhhhhc
Q 021928 254 NGSLSKEDAAFICVEALESI--PQTGLIFEVVNGE-EKVSDWKKCFSRLMEKT 303 (305)
Q Consensus 254 ~~~Is~~DvA~~iv~~l~~~--~~~~~~~~v~~g~-~s~~d~~~~~~~l~~~~ 303 (305)
..+++++|+|.++..++... ...+++||++++. .++.|+++.+.++.+..
T Consensus 239 Rdfi~v~D~a~~~~~~~~~~~~~~~~~i~Ni~~~~~~s~~dl~~~i~~~~~~~ 291 (346)
T d1ek6a_ 239 RDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKK 291 (346)
T ss_dssp ECEEEHHHHHHHHHHHHHHHTTTCCEEEEEECCSCCEEHHHHHHHHHHHHCSC
T ss_pred EeEEEEEeccchhhhhccccccccCceEEEeCCCCcccHHHHHHHHHHHhCCC
Confidence 46899999999998876543 3456799999876 48999999999998764
|
| >d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sulfolipid biosynthesis protein SQD1 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.82 E-value=2.3e-19 Score=166.48 Aligned_cols=204 Identities=19% Similarity=0.154 Sum_probs=137.2
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEc---C------------c-ch-------hhhhcCCCcEEeecCCCCHH
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVK---D------------K-RN-------AMESFGTYVESMAGDASNKK 154 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R---~------------~-~~-------~~~~~~~~v~~v~~D~~d~~ 154 (305)
+|+|||||||||||++++++|+++||+|++++. . + .. .....+.+++++.+|++|.+
T Consensus 1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~ 80 (393)
T d1i24a_ 1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDFE 80 (393)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhhcCCCcEEEEccCCCHH
Confidence 489999999999999999999999999999851 0 0 00 01112457999999999999
Q ss_pred HHHHHhcCc--cEEEECCcc-------------------------hHhhhhhhcCCC-EEEEEcccccccCCCCc-----
Q 021928 155 FLKTALRGV--RSIICPSEG-------------------------FISNAGSLKGVQ-HVILLSQLSVYRGSGGI----- 201 (305)
Q Consensus 155 ~~~~~~~~~--d~Vi~~~~g-------------------------~~~~~a~~~gv~-~~V~iSS~~~~~~~~~~----- 201 (305)
.+.++++++ |+|||.++- .+.+++++.+++ ++++.||..++......
T Consensus 81 ~l~~~~~~~~~d~ViHlAa~~~~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~~~ 160 (393)
T d1i24a_ 81 FLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPNIDIEEGY 160 (393)
T ss_dssp HHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGGCCCSSCBCSSE
T ss_pred HHHHHHHhhcchheeccccccccccccccccccccccccccccccHHHHHHHHhccccceeecccccccccccccccccc
Confidence 999999865 999997430 034456666655 57777777666432110
Q ss_pred ----------------ccccchHHHHHHHHHHHHH----HhCCCCEEEEecCCcccCCC---------------------
Q 021928 202 ----------------QALMKGNARKLAEQDESML----MASGIPYTIIRTGVLQNTPG--------------------- 240 (305)
Q Consensus 202 ----------------~~~~~~~~~~~~~~aE~~l----~~~gi~~tilRPg~l~~~~~--------------------- 240 (305)
.+...| ...|..+|.++ ++.+++++++||+.+.+...
T Consensus 161 ~~~~~~~~~~~~~~~~~p~~~Y--~~sK~~aE~~~~~~~~~~~l~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~ 238 (393)
T d1i24a_ 161 ITITHNGRTDTLPYPKQASSFY--HLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVFGT 238 (393)
T ss_dssp EEEEETTEEEEEECCCCCCSHH--HHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCCSTTTCC
T ss_pred ccccccccccccccccccccHH--HHHhhhhcccccccccccceeeeecccccccCCCcccccccccccccccccccccc
Confidence 111112 22344455544 46799999999988553211
Q ss_pred ----------CCccee-eecCCCCCCccCHHHHHHHHHHHhhCCCCCCcEEEEec--CCcCHHHHHHHHHHhhhhc
Q 021928 241 ----------GKQGFQ-FEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVVN--GEEKVSDWKKCFSRLMEKT 303 (305)
Q Consensus 241 ----------~~~~~~-~~~~~~~~~~Is~~DvA~~iv~~l~~~~~~~~~~~v~~--g~~s~~d~~~~~~~l~~~~ 303 (305)
.++.+. ++.+.....+++++|+++++..+++++...+..+.+.. ...++.++++.+.++.+..
T Consensus 239 ~i~~~~~~~~~~~~~~i~g~~~~~rd~v~v~D~~~a~~~~~~~~~~~g~~~~~~~~~~~~si~el~~~i~~~~~~~ 314 (393)
T d1i24a_ 239 ALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFTEQFSVNELASLVTKAGSKL 314 (393)
T ss_dssp HHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCCCTTCEEEEEECSEEEEHHHHHHHHHHHHHTT
T ss_pred chhhhhHHhhcCCeeEEeeecccccccccccchHHHHHHHHHhhcccceeeeecCCCCeeEHHHHHHHHHHHHHhh
Confidence 011111 23444557899999999999999998877665444332 3357899999998887643
|
| >d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.81 E-value=6.1e-19 Score=160.38 Aligned_cols=200 Identities=13% Similarity=0.019 Sum_probs=136.5
Q ss_pred CEE-EEEcCCChHHHHHHHHHHhCCCeEEEEEcCcch-----hhh-------hcCCCcEEeecCCCCHHHHHHHhcC--c
Q 021928 99 DAV-LVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-----AME-------SFGTYVESMAGDASNKKFLKTALRG--V 163 (305)
Q Consensus 99 ~~v-lVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~-----~~~-------~~~~~v~~v~~D~~d~~~~~~~~~~--~ 163 (305)
|+| |||||+||||++|+++|+++||+|++++|.+.. ... ....+++++.+|++|.+.+..++.+ .
T Consensus 1 kKI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 80 (347)
T d1t2aa_ 1 RNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKP 80 (347)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHHCC
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeecCCchhhHHHHhhccc
Confidence 567 999999999999999999999999999996542 111 1224689999999999999999875 4
Q ss_pred cEEEECCc-c---------------------hHhhhhhhcCC---CEEEEEcccccccCCCC--------cccccchHHH
Q 021928 164 RSIICPSE-G---------------------FISNAGSLKGV---QHVILLSQLSVYRGSGG--------IQALMKGNAR 210 (305)
Q Consensus 164 d~Vi~~~~-g---------------------~~~~~a~~~gv---~~~V~iSS~~~~~~~~~--------~~~~~~~~~~ 210 (305)
+.++++++ . .+.+++++.++ ++||++||..+|+.... ..+...|.
T Consensus 81 ~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~P~~~Yg-- 158 (347)
T d1t2aa_ 81 TEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYG-- 158 (347)
T ss_dssp SEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSSSSBCTTSCCCCCSHHH--
T ss_pred ceeeeeeeccccchhhccchhhhhhHHHHHHHHHHHHHHcCCCCCcEEEEecchheecCCCCCCCCCCCCCCCCCHHH--
Confidence 67776622 1 03455666654 48999999999863211 11112222
Q ss_pred HHHHHHHHHHH----hCCCCEEEEecCCcccCC-C------------------CCcceeeecCCCCCCccCHHHHHHHHH
Q 021928 211 KLAEQDESMLM----ASGIPYTIIRTGVLQNTP-G------------------GKQGFQFEEGCAANGSLSKEDAAFICV 267 (305)
Q Consensus 211 ~~~~~aE~~l~----~~gi~~tilRPg~l~~~~-~------------------~~~~~~~~~~~~~~~~Is~~DvA~~iv 267 (305)
..|..+|++++ ..+++++++||+.+++.. . ......++.+....++++++|+++++.
T Consensus 159 ~sK~~aE~~~~~~~~~~~~~~~ilr~~~vyGp~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~g~~~r~~i~v~D~~~a~~ 238 (347)
T d1t2aa_ 159 AAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEAMW 238 (347)
T ss_dssp HHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECCEEHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCCEEEEEecceeCCCCCCCccccccceeeehhhcCCcceeecCCCcceeeeeEecHHHHHHH
Confidence 23445666654 469999999998755421 1 112233445566678999999999999
Q ss_pred HHhhCCCCCCcEEEEecCC-cCHHHHHHHHHHhhhh
Q 021928 268 EALESIPQTGLIFEVVNGE-EKVSDWKKCFSRLMEK 302 (305)
Q Consensus 268 ~~l~~~~~~~~~~~v~~g~-~s~~d~~~~~~~l~~~ 302 (305)
.++++... ..|++..+. .++.+..+......++
T Consensus 239 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (347)
T d1t2aa_ 239 LMLQNDEP--EDFVIATGEVHSVREFVEKSFLHIGK 272 (347)
T ss_dssp HHHHSSSC--CCEEECCSCCEEHHHHHHHHHHHTTC
T ss_pred HHhhcCCC--ccceeccccccccchhhhhhhhhhcc
Confidence 99987643 457777654 4777777766555443
|
| >d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Trypanosoma brucei [TaxId: 5691]
Probab=99.81 E-value=5.6e-19 Score=163.40 Aligned_cols=204 Identities=15% Similarity=0.124 Sum_probs=139.2
Q ss_pred CCEEEEEcCCChHHHHHHHHHHh-CCCeEEEEEcCc---ch---------h-----------hhhcCCCcEEeecCCCCH
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIV-KRTRIKALVKDK---RN---------A-----------MESFGTYVESMAGDASNK 153 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~-~g~~V~~~~R~~---~~---------~-----------~~~~~~~v~~v~~D~~d~ 153 (305)
.|+||||||+||||++|+++|++ .|++|+++++-. .. . ......++.++.+|+.|.
T Consensus 2 ~MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~ 81 (383)
T d1gy8a_ 2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE 81 (383)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred cCEEEEeCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccCH
Confidence 37999999999999999999996 789999986411 00 0 001123688999999999
Q ss_pred HHHHHHhc---CccEEEECCcc----------------------hHhhhhhhcCCCEEEEEcccccccCCCC--------
Q 021928 154 KFLKTALR---GVRSIICPSEG----------------------FISNAGSLKGVQHVILLSQLSVYRGSGG-------- 200 (305)
Q Consensus 154 ~~~~~~~~---~~d~Vi~~~~g----------------------~~~~~a~~~gv~~~V~iSS~~~~~~~~~-------- 200 (305)
+.+.++++ ++|+|||+++. .+..++++.+++++++.|+..++.....
T Consensus 82 ~~l~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~N~~~t~~~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 161 (383)
T d1gy8a_ 82 DFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVSTNAE 161 (383)
T ss_dssp HHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGTBSCCC-----CCC
T ss_pred HHhhhhhhccceeehhhcccccccccccccccccccccccccccccchhhhccCCccccccccccccccccccccccccc
Confidence 99988885 67999998431 0345678899999999998877653211
Q ss_pred -------cccccchHHHHHHHHHHHHHH----hCCCCEEEEecCCcccCCCC----------------------------
Q 021928 201 -------IQALMKGNARKLAEQDESMLM----ASGIPYTIIRTGVLQNTPGG---------------------------- 241 (305)
Q Consensus 201 -------~~~~~~~~~~~~~~~aE~~l~----~~gi~~tilRPg~l~~~~~~---------------------------- 241 (305)
..+...| ...|...|.+++ ..+++++++||+.+++....
T Consensus 162 ~~~e~~~~~p~~~Y--~~sK~~~e~~~~~~~~~~gl~~~~lR~~~vyG~~~~~~~~~~~~~~~~~ip~ii~~~~~~~~~~ 239 (383)
T d1gy8a_ 162 PIDINAKKSPESPY--GESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDIAPD 239 (383)
T ss_dssp CBCTTSCCBCSSHH--HHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHHHHHHSCC
T ss_pred ccccccCCCCCCHH--HhhHhHHHHHHHHHHHHhCCCEEEEecceeeccCccccccccccccchhHHHHHHHHHhhcccc
Confidence 1112222 223444555554 47999999999885432110
Q ss_pred -----------Cccee-ee------cCCCCCCccCHHHHHHHHHHHhhCC--------CCCCcEEEEecCC-cCHHHHHH
Q 021928 242 -----------KQGFQ-FE------EGCAANGSLSKEDAAFICVEALESI--------PQTGLIFEVVNGE-EKVSDWKK 294 (305)
Q Consensus 242 -----------~~~~~-~~------~~~~~~~~Is~~DvA~~iv~~l~~~--------~~~~~~~~v~~g~-~s~~d~~~ 294 (305)
+..+. ++ .+.+.+.+++++|+|+++..+++.. ...+++||++++. .++.|+++
T Consensus 240 ~~~~~~~~~~~~~~~~i~g~~~~~~dg~~~Rdfi~v~D~~~a~~~~~~~~~~~~~~~~~~~~~i~Ni~s~~~~s~~el~~ 319 (383)
T d1gy8a_ 240 QRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNLGTSRGYSVREVIE 319 (383)
T ss_dssp -----------CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEESCSCCEEHHHHHH
T ss_pred ccchhhhhhhcCCceEEeCCccccCCCCeEEeeEEHHHHHHHHHHHHhhhccccccccccCccEEEeCCCCceeHHHHHH
Confidence 00000 01 1223346899999999999988642 2235799998775 58999999
Q ss_pred HHHHhhhhc
Q 021928 295 CFSRLMEKT 303 (305)
Q Consensus 295 ~~~~l~~~~ 303 (305)
.+.++.+..
T Consensus 320 ~i~~~~~~~ 328 (383)
T d1gy8a_ 320 VARKTTGHP 328 (383)
T ss_dssp HHHHHHCCC
T ss_pred HHHHHhCCC
Confidence 999988754
|
| >d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein PA4017 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.80 E-value=3.6e-19 Score=151.65 Aligned_cols=164 Identities=14% Similarity=0.097 Sum_probs=111.4
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCC--eEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHh-cCccEEEECCcc--
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRT--RIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTAL-RGVRSIICPSEG-- 172 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~-~~~d~Vi~~~~g-- 172 (305)
+|+||||||||+||++++++|+++|+ +|++++|++.... ..++ .+..|..++.+.+ ..+|+||++.+.
T Consensus 2 ~KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~~~----~~~~---~~~~d~~~~~~~~~~~~d~vi~~~g~~~ 74 (212)
T d2a35a1 2 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAEH----PRLD---NPVGPLAELLPQLDGSIDTAFCCLGTTI 74 (212)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCCC----TTEE---CCBSCHHHHGGGCCSCCSEEEECCCCCH
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchhhc----cccc---ccccchhhhhhccccchheeeeeeeeec
Confidence 58999999999999999999999997 6777777653221 2233 3344444444444 457999987331
Q ss_pred ------------------hHhhhhhhcCCCEEEEEcccccccCCCCcccccchHHHHHHHHHHHHHHhCCCC-EEEEecC
Q 021928 173 ------------------FISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMASGIP-YTIIRTG 233 (305)
Q Consensus 173 ------------------~~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~~~~~~aE~~l~~~gi~-~tilRPg 233 (305)
.+.+++++.++++|+++|+.+++...... ....|..+|+.+++.+++ ++|+||+
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~v~~~i~~Ss~~~~~~~~~~-------y~~~K~~~E~~l~~~~~~~~~I~Rp~ 147 (212)
T d2a35a1 75 KEAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADAKSSIF-------YNRVKGELEQALQEQGWPQLTIARPS 147 (212)
T ss_dssp HHHSSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTTCSSH-------HHHHHHHHHHHHTTSCCSEEEEEECC
T ss_pred cccccccccccchhhhhhhcccccccccccccccccccccccccccc-------hhHHHHHHhhhccccccccceeeCCc
Confidence 14567888999999999999887543322 223456789999998885 9999999
Q ss_pred CcccCCCCCcc-eee-----ecCCCCCCccCHHHHHHHHHHHhhCCCC
Q 021928 234 VLQNTPGGKQG-FQF-----EEGCAANGSLSKEDAAFICVEALESIPQ 275 (305)
Q Consensus 234 ~l~~~~~~~~~-~~~-----~~~~~~~~~Is~~DvA~~iv~~l~~~~~ 275 (305)
.+.+....... ..+ .........|+++|+|++++.+++++..
T Consensus 148 ~v~G~~~~~~~~~~~~~~~~~~~~~~~~~i~v~DvA~ai~~~~~~~~~ 195 (212)
T d2a35a1 148 LLFGPREEFRLAEILAAPIARILPGKYHGIEACDLARALWRLALEEGK 195 (212)
T ss_dssp SEESTTSCEEGGGGTTCCCC----CHHHHHHHHHHHHHHHHHHTCCCS
T ss_pred ceeCCcccccHHHHHHHHHhhccCCCCcEEEHHHHHHHHHHHHcCCCC
Confidence 97654321100 000 0011123458999999999999987654
|
| >d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: DTDP-4-dehydrorhamnose reductase RfbD species: Clostridium acetobutylicum [TaxId: 1488]
Probab=99.79 E-value=8.8e-19 Score=154.25 Aligned_cols=185 Identities=15% Similarity=0.088 Sum_probs=135.3
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcC--ccEEEECCcch---
Q 021928 99 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRG--VRSIICPSEGF--- 173 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~--~d~Vi~~~~g~--- 173 (305)
|+|||||||||||++|+++|.++||+|++++|+. .|+.|.+++++++++ .|+|||+++..
T Consensus 2 MKIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~---------------~D~~d~~~~~~~l~~~~~d~vih~a~~~~~~ 66 (281)
T d1vl0a_ 2 MKILITGANGQLGREIQKQLKGKNVEVIPTDVQD---------------LDITNVLAVNKFFNEKKPNVVINCAAHTAVD 66 (281)
T ss_dssp EEEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT---------------CCTTCHHHHHHHHHHHCCSEEEECCCCCCHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEeechh---------------ccCCCHHHHHHHHHHcCCCEEEeeccccccc
Confidence 7899999999999999999999999999998864 589999999999974 59999984310
Q ss_pred -------------------HhhhhhhcCCCEEEEEcccccccCCCC--------cccccchHHHHHHHHHHHHHHhCCCC
Q 021928 174 -------------------ISNAGSLKGVQHVILLSQLSVYRGSGG--------IQALMKGNARKLAEQDESMLMASGIP 226 (305)
Q Consensus 174 -------------------~~~~a~~~gv~~~V~iSS~~~~~~~~~--------~~~~~~~~~~~~~~~aE~~l~~~gi~ 226 (305)
+...+. ....++++.|+..++..... +.+... ....+...|.++++.+.+
T Consensus 67 ~~~~~~~~~~~~n~~~~~~~~~~~~-~~~~~~~~~ss~~v~~~~~~~~~~e~~~~~~~~~--~~~~k~~~e~~~~~~~~~ 143 (281)
T d1vl0a_ 67 KCEEQYDLAYKINAIGPKNLAAAAY-SVGAEIVQISTDYVFDGEAKEPITEFDEVNPQSA--YGKTKLEGENFVKALNPK 143 (281)
T ss_dssp HHHHCHHHHHHHHTHHHHHHHHHHH-HHTCEEEEEEEGGGSCSCCSSCBCTTSCCCCCSH--HHHHHHHHHHHHHHHCSS
T ss_pred cccccchhhcccccccccccccccc-cccccccccccceeeeccccccccccccccchhh--hhhhhhHHHHHHHHhCCC
Confidence 111122 33457777888776653211 111211 233456678899999999
Q ss_pred EEEEecCCcccCCCC----------CcceeeecCCCCCCccCHHHHHHHHHHHhhCCCCCCcEEEEecCC-cCHHHHHHH
Q 021928 227 YTIIRTGVLQNTPGG----------KQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVVNGE-EKVSDWKKC 295 (305)
Q Consensus 227 ~tilRPg~l~~~~~~----------~~~~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~~~~~~~~v~~g~-~s~~d~~~~ 295 (305)
++++||+++.+.... ........++....+++++|+++++..+++++.. ..|++++++ .++.|+++.
T Consensus 144 ~~i~R~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~~~~~~~~~~~~~~--g~~~~~~~~~~s~~e~~~~ 221 (281)
T d1vl0a_ 144 YYIVRTAWLYGDGNNFVKTMINLGKTHDELKVVHDQVGTPTSTVDLARVVLKVIDEKNY--GTFHCTCKGICSWYDFAVE 221 (281)
T ss_dssp EEEEEECSEESSSSCHHHHHHHHHHHCSEEEEESSCEECCEEHHHHHHHHHHHHHHTCC--EEEECCCBSCEEHHHHHHH
T ss_pred ccccceeEEeCCCcccccchhhhhccCCceeecCCceeccchhhhhhhhhhhhhhhccc--CceeEeCCCccchHHHHHH
Confidence 999999996643321 0112222456667899999999999999987653 489988766 589999999
Q ss_pred HHHhhhhc
Q 021928 296 FSRLMEKT 303 (305)
Q Consensus 296 ~~~l~~~~ 303 (305)
+.+..+..
T Consensus 222 i~~~~g~~ 229 (281)
T d1vl0a_ 222 IFRLTGID 229 (281)
T ss_dssp HHHHHCCC
T ss_pred HHHHhCCC
Confidence 99998764
|
| >d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.79 E-value=3.1e-18 Score=155.03 Aligned_cols=203 Identities=10% Similarity=-0.044 Sum_probs=134.9
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcch-----hhh-------hcCCCcEEeecCCCCHHHHHHHhc--Cc
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-----AME-------SFGTYVESMAGDASNKKFLKTALR--GV 163 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~-----~~~-------~~~~~v~~v~~D~~d~~~~~~~~~--~~ 163 (305)
+|++||||||||||++|+++|+++||+|++++|.... ... .....++++.+|+.+.+.+.+.++ ++
T Consensus 1 ~k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~ 80 (339)
T d1n7ha_ 1 RKIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIKP 80 (339)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHCC
T ss_pred CCEEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhhccccceEEEEccccCHHHHHHHHhhhcc
Confidence 4899999999999999999999999999999996432 111 112357899999999999999886 56
Q ss_pred cEEEECCcch----------------------Hhhhhhh-----cCCCEEEEEcccccccCCCC-------cccccchHH
Q 021928 164 RSIICPSEGF----------------------ISNAGSL-----KGVQHVILLSQLSVYRGSGG-------IQALMKGNA 209 (305)
Q Consensus 164 d~Vi~~~~g~----------------------~~~~a~~-----~gv~~~V~iSS~~~~~~~~~-------~~~~~~~~~ 209 (305)
|+|||+++.. +.++++. ....++++.||...+..... ..+...|..
T Consensus 81 D~Vih~Aa~~~~~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~~~~~~~~~~E~~~~~p~~~Y~~ 160 (339)
T d1n7ha_ 81 DEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPPQSETTPFHPRSPYAA 160 (339)
T ss_dssp SEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCSSBCTTSCCCCCSHHHH
T ss_pred chhhhccccccccccccCccccccccccccchhhhhhhhcccccccceeeeecccceecccCCCCCCCCCCCCCcchhhH
Confidence 9999984310 1222322 34457778887766543211 112222222
Q ss_pred HHHHHHHHHH----HHhCCCCEEEEecCCcccCC-C-----------------CC-cceeeecCCCCCCccCHHHHHHHH
Q 021928 210 RKLAEQDESM----LMASGIPYTIIRTGVLQNTP-G-----------------GK-QGFQFEEGCAANGSLSKEDAAFIC 266 (305)
Q Consensus 210 ~~~~~~aE~~----l~~~gi~~tilRPg~l~~~~-~-----------------~~-~~~~~~~~~~~~~~Is~~DvA~~i 266 (305)
.+..+|.+ .+..+++++++||+.+.+.. . .. .....+.+.....+++++|+|+++
T Consensus 161 --sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~rd~~~v~D~a~~~ 238 (339)
T d1n7ha_ 161 --SKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGFAGDYVEAM 238 (339)
T ss_dssp --HHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEECEEHHHHHHHH
T ss_pred --HHHHHHHHHHHHHHHhCCCEEEEEEccccCCCCCCCCCcchhhHHHHHHhcCCCCeEEeCCCCccccceeeehHHHHH
Confidence 23344544 34579999999998865421 1 11 112223444556799999999999
Q ss_pred HHHhhCCCCCCcEEEEecCCcCHHHHHHHHHHhhhhc
Q 021928 267 VEALESIPQTGLIFEVVNGEEKVSDWKKCFSRLMEKT 303 (305)
Q Consensus 267 v~~l~~~~~~~~~~~v~~g~~s~~d~~~~~~~l~~~~ 303 (305)
..+++++.. +..+...+...+..++++.+.++.+..
T Consensus 239 ~~~~~~~~~-~~~~~~~~~~~s~~~~~~~~~~~~~~~ 274 (339)
T d1n7ha_ 239 WLMLQQEKP-DDYVVATEEGHTVEEFLDVSFGYLGLN 274 (339)
T ss_dssp HHHHTSSSC-CEEEECCSCEEEHHHHHHHHHHHTTCC
T ss_pred HHHHhcCCC-Cccccccccccccchhhhhhhhhhhcc
Confidence 999987654 233333344568899999999887753
|
| >d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-tyvelose-2-epimerase species: Salmonella typhi [TaxId: 90370]
Probab=99.79 E-value=1.9e-18 Score=155.67 Aligned_cols=204 Identities=14% Similarity=0.057 Sum_probs=137.7
Q ss_pred EEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcc--hh---hh-hcCCCcEEeecCCCCHHHHHHHhcCc--cEEEECCc
Q 021928 100 AVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR--NA---ME-SFGTYVESMAGDASNKKFLKTALRGV--RSIICPSE 171 (305)
Q Consensus 100 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~--~~---~~-~~~~~v~~v~~D~~d~~~~~~~~~~~--d~Vi~~~~ 171 (305)
+||||||+||||++|+++|+++|++|+++++-.. .. .. ....+++++.+|+.|.+.+.++++++ |+|||+++
T Consensus 2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~~~~~~~~~~~~i~~Di~~~~~l~~~~~~~~~d~Vih~aa 81 (338)
T d1orra_ 2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKYMPDSCFHLAG 81 (338)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHCCSEEEECCC
T ss_pred EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHHHHhhccCCcEEEEcccCCHHHHHHHHHhcCCceEEeecc
Confidence 7999999999999999999999999999864221 11 11 12357999999999999999999875 99999843
Q ss_pred c----------------------hHhhhhhhcCCCEEEEEcccccccCCCCc----------------------ccccc-
Q 021928 172 G----------------------FISNAGSLKGVQHVILLSQLSVYRGSGGI----------------------QALMK- 206 (305)
Q Consensus 172 g----------------------~~~~~a~~~gv~~~V~iSS~~~~~~~~~~----------------------~~~~~- 206 (305)
. .+.+++.+.+++++|+.||..++...... ..+.+
T Consensus 82 ~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~i~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (338)
T d1orra_ 82 QVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLDFH 161 (338)
T ss_dssp CCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCTTSCCCCC
T ss_pred cccccccccChHHHHHHHHHHHHHHHHhhhcccccccccccccccccccccccccccccccccccccccCcccCCccccc
Confidence 1 14456788888887777776554321100 00001
Q ss_pred hHHHHHHHHHHHH----HHhCCCCEEEEecCCcccCCC----------------------CCccee-eecCCCCCCccCH
Q 021928 207 GNARKLAEQDESM----LMASGIPYTIIRTGVLQNTPG----------------------GKQGFQ-FEEGCAANGSLSK 259 (305)
Q Consensus 207 ~~~~~~~~~aE~~----l~~~gi~~tilRPg~l~~~~~----------------------~~~~~~-~~~~~~~~~~Is~ 259 (305)
......+...|.+ .+..++..+++|+..+..... .++.+. ++.+.....++++
T Consensus 162 ~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~r~~~~v 241 (338)
T d1orra_ 162 SPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVRDVLHA 241 (338)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCEEEESSSCCEEECEEH
T ss_pred cccccccchhhhhhhhhhhccCcccccccccceeeccccccccccccchhhHHHHHHHhccCCceEEeCCCceeEeeecc
Confidence 1111222233333 345788888888765331111 122222 2345566789999
Q ss_pred HHHHHHHHHHhhCCC-CCCcEEEEecCC---cCHHHHHHHHHHhhhhc
Q 021928 260 EDAAFICVEALESIP-QTGLIFEVVNGE---EKVSDWKKCFSRLMEKT 303 (305)
Q Consensus 260 ~DvA~~iv~~l~~~~-~~~~~~~v~~g~---~s~~d~~~~~~~l~~~~ 303 (305)
+|++++++.+++++. ..+++|++..+. .++.|+++.+.++.+..
T Consensus 242 ~D~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~s~~e~~~~i~~~~~~~ 289 (338)
T d1orra_ 242 EDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNID 289 (338)
T ss_dssp HHHHHHHHHHHHTHHHHTTCEEEESSCGGGEEEHHHHHHHHHHHHTCC
T ss_pred cchhhHHHHHHhccccccCccccccccccccccHHHHHHHHHHHHCCC
Confidence 999999999998754 567899997653 37889999998887754
|
| >d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) species: Escherichia coli [TaxId: 562]
Probab=99.77 E-value=6.8e-18 Score=151.48 Aligned_cols=192 Identities=10% Similarity=0.096 Sum_probs=135.2
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcC--ccEEEECCc---c
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRG--VRSIICPSE---G 172 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~--~d~Vi~~~~---g 172 (305)
+|+|||||||||||++|+++|+++|+.|+++.+.. ..|+.|.+.+...+++ +|.|+|++. .
T Consensus 2 kkkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~~--------------~~~~~~~~~~~~~~~~~~~d~v~~~a~~~~~ 67 (315)
T d1e6ua_ 2 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD--------------ELNLLDSRAVHDFFASERIDQVYLAAAKVGG 67 (315)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT--------------TCCTTCHHHHHHHHHHHCCSEEEECCCCCCC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCch--------------hccccCHHHHHHHHhhcCCCEEEEcchhccc
Confidence 47999999999999999999999999988765432 1588899998888764 799998732 1
Q ss_pred --------------------hHhhhhhhcCCCEEEEEcccccccCCCCc----------cccc-chHHHHHHHHHHHHHH
Q 021928 173 --------------------FISNAGSLKGVQHVILLSQLSVYRGSGGI----------QALM-KGNARKLAEQDESMLM 221 (305)
Q Consensus 173 --------------------~~~~~a~~~gv~~~V~iSS~~~~~~~~~~----------~~~~-~~~~~~~~~~aE~~l~ 221 (305)
.+.++|.+.++++|||+||.++|.+.... .... ...+...|..+|+.++
T Consensus 68 ~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~v~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~~~ 147 (315)
T d1e6ua_ 68 IVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIAKIAGIKLCE 147 (315)
T ss_dssp HHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGSCTTCCSSBCGGGTTSSCCCGGGHHHHHHHHHHHHHHH
T ss_pred cccchhhHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCceEcCCCCCCCccCCccccCCCCCCCCHHHHHHHHHHHHHH
Confidence 14556788999999999999998642211 0000 1112333555666554
Q ss_pred ----hCCCCEEEEecCCcccCCC-----------------------CCccee-eecCCCCCCccCHHHHHHHHHHHhhCC
Q 021928 222 ----ASGIPYTIIRTGVLQNTPG-----------------------GKQGFQ-FEEGCAANGSLSKEDAAFICVEALESI 273 (305)
Q Consensus 222 ----~~gi~~tilRPg~l~~~~~-----------------------~~~~~~-~~~~~~~~~~Is~~DvA~~iv~~l~~~ 273 (305)
+.+++++++||+.+.+... ....+. .+.+.....+++++|++.++..++.+.
T Consensus 148 ~~~~~~gl~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~v~d~~~~~~~~~~~~ 227 (315)
T d1e6ua_ 148 SYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAAASIHVMELA 227 (315)
T ss_dssp HHHHHHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEEHHHHHHHHHHHHHSC
T ss_pred HHHHHhCCCEEEEeeccEECCCCCCCccccccceeeeccchhhhhccCCceEEcCCCceEEEEEEeehhHHHHHHhhhhc
Confidence 5699999999988553211 111111 223445578899999999999998764
Q ss_pred C--------CCCcEEEEecCC-cCHHHHHHHHHHhhhhc
Q 021928 274 P--------QTGLIFEVVNGE-EKVSDWKKCFSRLMEKT 303 (305)
Q Consensus 274 ~--------~~~~~~~v~~g~-~s~~d~~~~~~~l~~~~ 303 (305)
. .....+++..+. .++.++.+.+.++++..
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~i~~~~~~~ 266 (315)
T d1e6ua_ 228 HEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYK 266 (315)
T ss_dssp HHHHHHTSBTTBCCEEESCSCCEEHHHHHHHHHHHHTCC
T ss_pred cccccccccccccccccCCCcchHHHHHHHHHHHHhCCC
Confidence 3 234577777655 58899999999988754
|
| >d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative oxidoreductase Rv2002 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.74 E-value=4.3e-17 Score=142.44 Aligned_cols=188 Identities=14% Similarity=0.135 Sum_probs=133.0
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh---hcCCCcEEeecCCCCHHHHHHHhc-------CccEE
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALR-------GVRSI 166 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~---~~~~~v~~v~~D~~d~~~~~~~~~-------~~d~V 166 (305)
.+|+++||||+++||++++++|+++|++|++.+|++++..+ .++..+.++.+|++|.++++++++ .+|++
T Consensus 5 ~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~idil 84 (244)
T d1nffa_ 5 TGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHVL 84 (244)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhCcceEEEeecCCHHHHHHHHHHHHHHhCCCeEE
Confidence 46999999999999999999999999999999999876433 345678899999999888776653 57999
Q ss_pred EECCcch------------------------------HhhhhhhcCCCEEEEEcccccccCCCCcccccchHH--HHHHH
Q 021928 167 ICPSEGF------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA--RKLAE 214 (305)
Q Consensus 167 i~~~~g~------------------------------~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~--~~~~~ 214 (305)
|++++.. ....+++.+-.+||++||..+..+......|...+. ..+.+
T Consensus 85 innAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asKaal~~ltk 164 (244)
T d1nffa_ 85 VNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGLTK 164 (244)
T ss_dssp EECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHH
T ss_pred EECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcceEEeccccccccccccccchhhHHHHHHHHHH
Confidence 9884310 112234455679999999988877666666654432 22223
Q ss_pred HHHHHHHhCCCCEEEEecCCcccCCC-CCcceeeecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEEEEecCC
Q 021928 215 QDESMLMASGIPYTIIRTGVLQNTPG-GKQGFQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVNGE 286 (305)
Q Consensus 215 ~aE~~l~~~gi~~tilRPg~l~~~~~-~~~~~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~v~~g~ 286 (305)
.....+...++++..|.||++..... ..... . .......+..++|+|++++.++.+.. -.|+++.|.+|-
T Consensus 165 ~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~-~-~~~pl~R~~~p~diA~~v~fL~s~~s~~itG~~i~vDGG~ 237 (244)
T d1nffa_ 165 STALELGPSGIRVNSIHPGLVKTPMTDWVPED-I-FQTALGRAAEPVEVSNLVVYLASDESSYSTGAEFVVDGGT 237 (244)
T ss_dssp HHHHHHGGGTEEEEEEEECCBCSGGGTTSCTT-C-SCCSSSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred HHHHHhcccCEEEEEEeeCCccChhHhhhhHH-H-HhccccCCCCHHHHHHHHHHHhChhhCCCcCCEEEECCCe
Confidence 33344667899999999999643211 11000 0 11122346789999999999996433 468999998875
|
| >d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Escherichia coli [TaxId: 562]
Probab=99.72 E-value=2.1e-17 Score=144.28 Aligned_cols=190 Identities=14% Similarity=0.156 Sum_probs=133.4
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh---hcCCCcEEeecCCCCHHHHHHHhc-------CccEE
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALR-------GVRSI 166 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~---~~~~~v~~v~~D~~d~~~~~~~~~-------~~d~V 166 (305)
++|+++||||+++||++++++|+++|++|++..|++++..+ .++.+...+.+|++|.++++++++ .+|++
T Consensus 3 ~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDil 82 (243)
T d1q7ba_ 3 EGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLMLNVTDPASIESVLEKIRAEFGEVDIL 82 (243)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHTCSCSEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCCcEEEEEecCHHHhhhhhhhhhcccCCccee
Confidence 46999999999999999999999999999999999876443 345578899999999888776654 57999
Q ss_pred EECCcch------------------------------HhhhhhhcCCCEEEEEcccccccCCCCcccccchHH--HHHHH
Q 021928 167 ICPSEGF------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA--RKLAE 214 (305)
Q Consensus 167 i~~~~g~------------------------------~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~--~~~~~ 214 (305)
|++++.. ....+++.+-.+||++||..+..+......|..++. ..+.+
T Consensus 83 VnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~~~~~Y~asKaal~~lt~ 162 (243)
T d1q7ba_ 83 VNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNGGQANYAAAKAGLIGFSK 162 (243)
T ss_dssp EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHHHHHHHHH
T ss_pred hhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecchhhcCCCCCCHHHHHHHHHHHHHHH
Confidence 9874310 112234456679999999988877666666655432 22223
Q ss_pred HHHHHHHhCCCCEEEEecCCcccCC----CCCcceeeecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEEEEecCC
Q 021928 215 QDESMLMASGIPYTIIRTGVLQNTP----GGKQGFQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVNGE 286 (305)
Q Consensus 215 ~aE~~l~~~gi~~tilRPg~l~~~~----~~~~~~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~v~~g~ 286 (305)
.....+...++++..|.||++.... .......+....+...+..++|+|.+++.++.+.. ..|+++.|.+|-
T Consensus 163 ~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~s~~itGq~i~vdGG~ 240 (243)
T d1q7ba_ 163 SLAREVASRGITVNVVAPGFIETDMTRALSDDQRAGILAQVPAGRLGGAQEIANAVAFLASDEAAYITGETLHVNGGM 240 (243)
T ss_dssp HHHHHHGGGTEEEEEEEECSBCCHHHHTSCHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred HHHHHhCccCeEEEEEecceEechhhhhhhhhHHHHHHhcCCCCCCCCHHHHHHHHHHHhCchhcCCcCCeEEECCCe
Confidence 3334456789999999999864221 10000001111222346689999999999996433 478999998874
|
| >d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (s)-1-phenylethanol dehydrogenase species: Azoarcus sp. ebn1 [TaxId: 76114]
Probab=99.72 E-value=1.5e-16 Score=139.04 Aligned_cols=190 Identities=14% Similarity=0.080 Sum_probs=130.5
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchh----hhhcCCCcEEeecCCCCHHHHHHHh-------cCccE
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA----MESFGTYVESMAGDASNKKFLKTAL-------RGVRS 165 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~----~~~~~~~v~~v~~D~~d~~~~~~~~-------~~~d~ 165 (305)
.+|+++||||+++||++++++|++.|++|++.+|++.+. .+..+.++..+.+|++|.+++++++ ..+|+
T Consensus 4 ~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~G~iDi 83 (247)
T d2ew8a1 4 KDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCDI 83 (247)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCCCCE
Confidence 469999999999999999999999999999999987542 2234567899999999988887665 36799
Q ss_pred EEECCcch------------------------------HhhhhhhcCCCEEEEEcccccccCCCCcccccchHH--HHHH
Q 021928 166 IICPSEGF------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA--RKLA 213 (305)
Q Consensus 166 Vi~~~~g~------------------------------~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~--~~~~ 213 (305)
+|++++.. ....+++.+-.+||++||..+..+.+....|..++. ..+.
T Consensus 84 lVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~asKaal~~lt 163 (247)
T d2ew8a1 84 LVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYISTKAANIGFT 163 (247)
T ss_dssp EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCSSCHHHHHHHHHHHHHH
T ss_pred EEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCCccccccchhcccCcccccchhhhccHHHHH
Confidence 99874310 112244566679999999988877666666655442 2222
Q ss_pred HHHHHHHHhCCCCEEEEecCCcccCCCC----Ccce-eeec-CCCCCCccCHHHHHHHHHHHhhCCC--CCCcEEEEecC
Q 021928 214 EQDESMLMASGIPYTIIRTGVLQNTPGG----KQGF-QFEE-GCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVNG 285 (305)
Q Consensus 214 ~~aE~~l~~~gi~~tilRPg~l~~~~~~----~~~~-~~~~-~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~v~~g 285 (305)
+.....+...++++..|.||++...... .... .... ......+..++|||.+++.++.+.. -.|+++.|.+|
T Consensus 164 k~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~l~r~~~pedvA~~v~fL~S~~s~~itG~~i~vDGG 243 (247)
T d2ew8a1 164 RALASDLGKDGITVNAIAPSLVRTATTEASALSAMFDVLPNMLQAIPRLQVPLDLTGAAAFLASDDASFITGQTLAVDGG 243 (247)
T ss_dssp HHHHHHHGGGTEEEEEEEECCC------------------CTTSSSCSCCCTHHHHHHHHHHTSGGGTTCCSCEEEESSS
T ss_pred HHHHHHhcccCeEEEEEeeCCCCCccccccccchhHHHHHHHhccCCCCCCHHHHHHHHHHHhCchhcCCcCCeEEECCC
Confidence 3333445678999999999996432110 0000 0001 1112235578999999999986433 47899999987
Q ss_pred C
Q 021928 286 E 286 (305)
Q Consensus 286 ~ 286 (305)
-
T Consensus 244 ~ 244 (247)
T d2ew8a1 244 M 244 (247)
T ss_dssp C
T ss_pred E
Confidence 5
|
| >d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=99.72 E-value=6.5e-17 Score=141.80 Aligned_cols=192 Identities=17% Similarity=0.182 Sum_probs=133.5
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh------hcCCCcEEeecCCCCHHHHHHHhc-------
Q 021928 95 PEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTALR------- 161 (305)
Q Consensus 95 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~------~~~~~v~~v~~D~~d~~~~~~~~~------- 161 (305)
....|.++||||+++||++++++|++.|++|+++.|++++..+ ..+.++..+.+|++|.+++.++++
T Consensus 7 ~lenKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~g 86 (251)
T d2c07a1 7 CGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHK 86 (251)
T ss_dssp CCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCS
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhcC
Confidence 3456999999999999999999999999999999999766332 234578999999999988876664
Q ss_pred CccEEEECCcch------------------------------HhhhhhhcCCCEEEEEcccccccCCCCcccccchHH--
Q 021928 162 GVRSIICPSEGF------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA-- 209 (305)
Q Consensus 162 ~~d~Vi~~~~g~------------------------------~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~-- 209 (305)
.+|++|++++.. .....++.+-.+||++||..+..+......|..++.
T Consensus 87 ~iDilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~~~~~Y~asKaal 166 (251)
T d2c07a1 87 NVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQANYSSSKAGV 166 (251)
T ss_dssp CCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHHHH
T ss_pred CceeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCCCeEEEEECCHHhcCCCCCCHHHHHHHHHH
Confidence 679999874310 112234566679999999988877666666655432
Q ss_pred HHHHHHHHHHHHhCCCCEEEEecCCcccCCCCC--cce--eeecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEEEEe
Q 021928 210 RKLAEQDESMLMASGIPYTIIRTGVLQNTPGGK--QGF--QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVV 283 (305)
Q Consensus 210 ~~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~--~~~--~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~v~ 283 (305)
..+.+.....+...|+++..|.||++....... +.. .+....+...+..++|+|.+++.++.+.. -.|+++.|.
T Consensus 167 ~~ltr~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~s~~itG~~i~vD 246 (251)
T d2c07a1 167 IGFTKSLAKELASRNITVNAIAPGFISSDMTDKISEQIKKNIISNIPAGRMGTPEEVANLACFLSSDKSGYINGRVFVID 246 (251)
T ss_dssp HHHHHHHHHHHGGGTEEEEEEEECSBCC-----CCHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred HHHHHHHHHHhhhhCeEEEEEccCCEecccccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhCCCcCcEEEEC
Confidence 222333334466789999999999965332111 000 01111122346689999999999996443 468999998
Q ss_pred cCC
Q 021928 284 NGE 286 (305)
Q Consensus 284 ~g~ 286 (305)
+|-
T Consensus 247 GG~ 249 (251)
T d2c07a1 247 GGL 249 (251)
T ss_dssp TTS
T ss_pred CCc
Confidence 874
|
| >d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase species: Streptomyces hydrogenans [TaxId: 1905]
Probab=99.72 E-value=1.4e-16 Score=139.85 Aligned_cols=188 Identities=14% Similarity=0.077 Sum_probs=132.0
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh---hcCCCcEEeecCCCCHHHHHHHhc-------CccE
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALR-------GVRS 165 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~---~~~~~v~~v~~D~~d~~~~~~~~~-------~~d~ 165 (305)
..+|+++||||+++||++++++|+++|++|++.+|++++..+ .++.++.++++|++|.++++++++ .+|+
T Consensus 3 L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi 82 (254)
T d1hdca_ 3 LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDG 82 (254)
T ss_dssp CCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred CCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCceEEEEcccCCHHHHHHHHHHHHHHcCCccE
Confidence 356999999999999999999999999999999999876433 234578999999999888876653 6799
Q ss_pred EEECCcch------------------------------HhhhhhhcCCCEEEEEcccccccCCCCcccccchHH--HHHH
Q 021928 166 IICPSEGF------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA--RKLA 213 (305)
Q Consensus 166 Vi~~~~g~------------------------------~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~--~~~~ 213 (305)
+|++++.. ....+++.+-.+||++||.....+......|...+. ..+.
T Consensus 83 lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS~~~~~~~~~~~~Y~asKaal~~lt 162 (254)
T d1hdca_ 83 LVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGVRGLS 162 (254)
T ss_dssp EEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHH
T ss_pred EEecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCCCeecccccchhcccccchhhHHHHHHHHHHHH
Confidence 99874310 112234566679999999988877666666655432 2222
Q ss_pred HHHHHHHHhCCCCEEEEecCCcccCC------CCCcceeeecCCCCCCc--cCHHHHHHHHHHHhhCCC--CCCcEEEEe
Q 021928 214 EQDESMLMASGIPYTIIRTGVLQNTP------GGKQGFQFEEGCAANGS--LSKEDAAFICVEALESIP--QTGLIFEVV 283 (305)
Q Consensus 214 ~~aE~~l~~~gi~~tilRPg~l~~~~------~~~~~~~~~~~~~~~~~--Is~~DvA~~iv~~l~~~~--~~~~~~~v~ 283 (305)
+.....+...++++..|.||++.... ...+.. ....+.+. ..++|||.+++.++.+.. -.|+++.|.
T Consensus 163 ~~lA~e~a~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~---~~~~pl~R~g~~PedvA~~v~fL~S~~a~~itG~~i~vD 239 (254)
T d1hdca_ 163 KLAAVELGTDRIRVNSVHPGMTYTPMTAETGIRQGEGN---YPNTPMGRVGNEPGEIAGAVVKLLSDTSSYVTGAELAVD 239 (254)
T ss_dssp HHHHHHHGGGTEEEEEEEECSBCCHHHHHHTCCCSTTS---CTTSTTSSCB-CHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred HHHHHHhCCCceEEEEeeeCcccCccchhcCHHHHHHH---HhCCCCCCCCCCHHHHHHHHHHHhchhhCCCCCceEEeC
Confidence 33334456789999999999964211 111100 11112233 358999999999996433 478999999
Q ss_pred cCC
Q 021928 284 NGE 286 (305)
Q Consensus 284 ~g~ 286 (305)
+|-
T Consensus 240 GG~ 242 (254)
T d1hdca_ 240 GGW 242 (254)
T ss_dssp TTT
T ss_pred CCc
Confidence 875
|
| >d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.71 E-value=1.1e-16 Score=139.85 Aligned_cols=191 Identities=14% Similarity=0.053 Sum_probs=132.7
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhc--CCCcEEeecCCCCHHHHHHHhc---CccEEEECC
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF--GTYVESMAGDASNKKFLKTALR---GVRSIICPS 170 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~--~~~v~~v~~D~~d~~~~~~~~~---~~d~Vi~~~ 170 (305)
..+|++|||||+++||++++++|+++|++|++++|++++..+.. ..++..+.+|++|.++++++++ .+|++|+++
T Consensus 5 L~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~g~iDilVnnA 84 (244)
T d1pr9a_ 5 LAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALGSVGPVDLLVNNA 84 (244)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCCEEEECC
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHHhCCceEEEecc
Confidence 45699999999999999999999999999999999987754322 2358899999999999988876 469999874
Q ss_pred cch------------------------------Hhh-hhhhcCCCEEEEEcccccccCCCCcccccchHH--HHHHHHHH
Q 021928 171 EGF------------------------------ISN-AGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA--RKLAEQDE 217 (305)
Q Consensus 171 ~g~------------------------------~~~-~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~--~~~~~~aE 217 (305)
+.. ... ..++.+-.++|++||.....+.+....|...+. ..+.+...
T Consensus 85 g~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~~~~~Y~asKaal~~lt~~lA 164 (244)
T d1pr9a_ 85 AVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKVMA 164 (244)
T ss_dssp CCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHH
T ss_pred ccccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeecccccccccccchhhhhhhHHHHHHHHHHHH
Confidence 310 111 123445679999999988776666656654332 22223333
Q ss_pred HHHHhCCCCEEEEecCCcccCC----CCCcc--eeeecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEEEEecCC
Q 021928 218 SMLMASGIPYTIIRTGVLQNTP----GGKQG--FQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVNGE 286 (305)
Q Consensus 218 ~~l~~~gi~~tilRPg~l~~~~----~~~~~--~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~v~~g~ 286 (305)
..+...++++..|.||++.... ..... ..+....+...+.+++|||++++.++.+.. -.|+++.|.+|-
T Consensus 165 ~el~~~gIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~R~~~peevA~~v~fL~S~~a~~itG~~i~vDGG~ 241 (244)
T d1pr9a_ 165 LELGPHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPLGKFAEVEHVVNAILFLLSDRSGMTTGSTLPVEGGF 241 (244)
T ss_dssp HHHGGGTEEEEEEEECCBCSHHHHTTSCSHHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred HHhCCCcEEEEEEeeCcCcChHHhhhccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhCCcCCcEEEECccH
Confidence 4456689999999999964221 11100 000011122446789999999999996433 478999998774
|
| >d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-glucose-4,6-dehydratase species: Yersinia pseudotuberculosis [TaxId: 633]
Probab=99.71 E-value=9.2e-17 Score=146.11 Aligned_cols=205 Identities=12% Similarity=0.050 Sum_probs=131.5
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh-----hcCCCcEEeecCCCCHHHHHHHhcC--ccEEEEC
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME-----SFGTYVESMAGDASNKKFLKTALRG--VRSIICP 169 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~-----~~~~~v~~v~~D~~d~~~~~~~~~~--~d~Vi~~ 169 (305)
.+|+|||||||||||++|+++|+++|++|++++|+..+... ...+.++++.+|++|.+.+.++++. .|+|+|+
T Consensus 7 ~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~l~~~~~~~~~~~v~~~ 86 (356)
T d1rkxa_ 7 QGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREFQPEIVFHM 86 (356)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhhhcccCCeEEEeeccChHhhhhhhhhchhhhhhhh
Confidence 35999999999999999999999999999999998765322 1235799999999999999998875 4888887
Q ss_pred Ccc----------------------hHhhhhhhcC-CCEEEEEcccccccCCC---------CcccccchHHHHHHHHHH
Q 021928 170 SEG----------------------FISNAGSLKG-VQHVILLSQLSVYRGSG---------GIQALMKGNARKLAEQDE 217 (305)
Q Consensus 170 ~~g----------------------~~~~~a~~~g-v~~~V~iSS~~~~~~~~---------~~~~~~~~~~~~~~~~aE 217 (305)
++. .+.+++++.+ ...+++.|+...+.... ...+...+.. .+...|
T Consensus 87 aa~~~~~~~~~~~~~~~~~Nv~g~~n~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~p~~~y~~--~k~~~e 164 (356)
T d1rkxa_ 87 AAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWIWGYRENEAMGGYDPYSN--SKGCAE 164 (356)
T ss_dssp CSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCSSSCBCTTSCBCCSSHHHH--HHHHHH
T ss_pred hccccccccccCCccccccccccchhhhhhhhccccccccccccccccccccccccccccccccCCCCcccc--ccccch
Confidence 331 0234455544 45555555554443211 1111111111 111222
Q ss_pred HHH-------------HhCCCCEEEEecCCcccCCC---------------CCcceeeecCCCCCCccCHHHHHHHHHHH
Q 021928 218 SML-------------MASGIPYTIIRTGVLQNTPG---------------GKQGFQFEEGCAANGSLSKEDAAFICVEA 269 (305)
Q Consensus 218 ~~l-------------~~~gi~~tilRPg~l~~~~~---------------~~~~~~~~~~~~~~~~Is~~DvA~~iv~~ 269 (305)
..+ ...++.++++||+.+.+... .+.......+.....+++++|+|.++..+
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~D~~~a~~~~ 244 (356)
T d1rkxa_ 165 LVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVIIRNPHAIRPWQHVLEPLSGYLLL 244 (356)
T ss_dssp HHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCEECSCTTCEECCEETHHHHHHHHHH
T ss_pred hhhhHHhhhcccchhccccCceEEeccCCCeeCCCcchhhHHHHHHHHHHhCCCceEEeeccccccccccccccchhhhh
Confidence 211 23578999999998553221 12223334455557789999999999988
Q ss_pred hhCCCC----CCcEEEEec--CC-cCHHHHHHHHHHhhhhc
Q 021928 270 LESIPQ----TGLIFEVVN--GE-EKVSDWKKCFSRLMEKT 303 (305)
Q Consensus 270 l~~~~~----~~~~~~v~~--g~-~s~~d~~~~~~~l~~~~ 303 (305)
+..+.. .+...+... +. .++.++++.+.+..+..
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 285 (356)
T d1rkxa_ 245 AQKLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWGEG 285 (356)
T ss_dssp HHHHHHTCGGGCSEEECCCCGGGCEEHHHHHHHHHHHHCTT
T ss_pred hhhhcccccccccccccccccccccccchhhhhhHHHhCCC
Confidence 876432 233333332 22 36788888888877643
|
| >d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sorbitol dehydrogenase species: Rhodobacter sphaeroides [TaxId: 1063]
Probab=99.70 E-value=1.9e-16 Score=139.21 Aligned_cols=190 Identities=14% Similarity=0.146 Sum_probs=132.7
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhh---hhcCCCcEEeecCCCCHHHHHHHhc-------CccEE
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM---ESFGTYVESMAGDASNKKFLKTALR-------GVRSI 166 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~---~~~~~~v~~v~~D~~d~~~~~~~~~-------~~d~V 166 (305)
.+|+++||||+++||++++++|+++|++|++..|+.++.. +.++.++..+.+|++|.++++++++ .+|++
T Consensus 4 ~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iDil 83 (256)
T d1k2wa_ 4 DGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIGPAACAIALDVTDQASIDRCVAELLDRWGSIDIL 83 (256)
T ss_dssp TTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCceEEEEeeCCCHHHHHHHHHHHHHHhCCccEE
Confidence 4699999999999999999999999999999999987643 3346678999999999988877664 57999
Q ss_pred EECCcch--------------------------H----hh-hhhhcCCCEEEEEcccccccCCCCcccccchHH--HHHH
Q 021928 167 ICPSEGF--------------------------I----SN-AGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA--RKLA 213 (305)
Q Consensus 167 i~~~~g~--------------------------~----~~-~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~--~~~~ 213 (305)
|++++.. + .. ..++.+-.+||++||..+..+......|...+. ..+.
T Consensus 84 VnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~lt 163 (256)
T d1k2wa_ 84 VNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGRRGEALVGVYCATKAAVISLT 163 (256)
T ss_dssp EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHH
T ss_pred EeecccccccccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccchhhccccccccchhhhhhHHHHHH
Confidence 9884310 0 11 123334569999999998877766666655432 2222
Q ss_pred HHHHHHHHhCCCCEEEEecCCcccCCCC------------Ccc---eeeecCCCCCCccCHHHHHHHHHHHhhCCC--CC
Q 021928 214 EQDESMLMASGIPYTIIRTGVLQNTPGG------------KQG---FQFEEGCAANGSLSKEDAAFICVEALESIP--QT 276 (305)
Q Consensus 214 ~~aE~~l~~~gi~~tilRPg~l~~~~~~------------~~~---~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~ 276 (305)
+.....+...||++..|.||++...... ... ..+....+..-+..++|||.+++.++.+.. -.
T Consensus 164 ~~lA~el~~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~~~p~evA~~v~fL~S~~a~~iT 243 (256)
T d1k2wa_ 164 QSAGLNLIRHGINVNAIAPGVVDGEHWDGVDAKFADYENLPRGEKKRQVGAAVPFGRMGRAEDLTGMAIFLATPEADYIV 243 (256)
T ss_dssp HHHHHHHGGGTEEEEEEEECCBCCTTHHHHHHHHHHHHTCCTTHHHHHHHHHSTTSSCBCHHHHHHHHHHTTSGGGTTCC
T ss_pred HHHHHHhcccCeEEEEEecCCCCchhhhhhhhhhhhhccCChHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhCCcc
Confidence 3333446678999999999986433210 000 000011122346689999999999886433 46
Q ss_pred CcEEEEecCC
Q 021928 277 GLIFEVVNGE 286 (305)
Q Consensus 277 ~~~~~v~~g~ 286 (305)
|+++.|.+|.
T Consensus 244 G~~i~vDGG~ 253 (256)
T d1k2wa_ 244 AQTYNVDGGN 253 (256)
T ss_dssp SCEEEESTTS
T ss_pred CceEEECcch
Confidence 8999999874
|
| >d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein TTHA0369 species: Thermus thermophilus [TaxId: 274]
Probab=99.70 E-value=3.2e-16 Score=137.07 Aligned_cols=190 Identities=13% Similarity=0.042 Sum_probs=129.8
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhc-------CccEEEEC
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR-------GVRSIICP 169 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~-------~~d~Vi~~ 169 (305)
.+|++|||||+++||++++++|+++|++|++..|+++........+..++++|++|.++++++++ .+|++|++
T Consensus 4 ~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLVnn 83 (248)
T d2d1ya1 4 AGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVAEAIGGAFFQVDLEDERERVRFVEEAAYALGRVDVLVNN 83 (248)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHHHHHHHHTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhcCCCCeEEEe
Confidence 45999999999999999999999999999999998765322212246789999999887776554 67999987
Q ss_pred Ccc----h--------------------------HhhhhhhcCCCEEEEEcccccccCCCCcccccchHH--HHHHHHHH
Q 021928 170 SEG----F--------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA--RKLAEQDE 217 (305)
Q Consensus 170 ~~g----~--------------------------~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~--~~~~~~aE 217 (305)
++. . ....+++.+-.+||++||..+..+......|...+. ..+.+...
T Consensus 84 AG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asKaal~~ltk~lA 163 (248)
T d2d1ya1 84 AAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQENAAYNASKGGLVNLTRSLA 163 (248)
T ss_dssp CCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBCTTBHHHHHHHHHHHHHHHHHH
T ss_pred CcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhcccccccccccccccccccccccccccchhHHHHHHHHHHHHHHH
Confidence 431 0 112244556679999999988877666666655432 22223333
Q ss_pred HHHHhCCCCEEEEecCCcccCC-------CC-Ccce--eeecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEEEEecC
Q 021928 218 SMLMASGIPYTIIRTGVLQNTP-------GG-KQGF--QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVNG 285 (305)
Q Consensus 218 ~~l~~~gi~~tilRPg~l~~~~-------~~-~~~~--~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~v~~g 285 (305)
..+...++++..|.||++.... .. .+.. .+....+...+..++|+|++++.++.+.. -.|+++.|.+|
T Consensus 164 ~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~pedia~~v~fL~S~~s~~itG~~i~vDGG 243 (248)
T d2d1ya1 164 LDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLFLASEKASFITGAILPVDGG 243 (248)
T ss_dssp HHHGGGTEEEEEEEECSBCCHHHHHHHC--------CHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred HHhhhhCcEEEEEeeCCCCCchHHHHhhcCCCHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCCCCcEEEcCcC
Confidence 4456789999999999964211 00 0000 01111122345689999999999996433 47899999877
Q ss_pred C
Q 021928 286 E 286 (305)
Q Consensus 286 ~ 286 (305)
-
T Consensus 244 ~ 244 (248)
T d2d1ya1 244 M 244 (248)
T ss_dssp G
T ss_pred c
Confidence 5
|
| >d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.70 E-value=1.8e-16 Score=138.23 Aligned_cols=191 Identities=14% Similarity=0.063 Sum_probs=132.2
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhc--CCCcEEeecCCCCHHHHHHHhc---CccEEEECC
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF--GTYVESMAGDASNKKFLKTALR---GVRSIICPS 170 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~--~~~v~~v~~D~~d~~~~~~~~~---~~d~Vi~~~ 170 (305)
..+|++|||||+++||++++++|+++|++|+++.|++++..+.. ..++..+.+|++|.++++++++ .+|++|+++
T Consensus 3 l~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~g~iDilVnnA 82 (242)
T d1cyda_ 3 FSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALGGIGPVDLLVNNA 82 (242)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCSEEEECC
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHHcCCCeEEEECC
Confidence 45699999999999999999999999999999999987644321 2468899999999999998887 469999874
Q ss_pred cch--------------------------Hhh-----hhhhcCCCEEEEEcccccccCCCCcccccchHH--HHHHHHHH
Q 021928 171 EGF--------------------------ISN-----AGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA--RKLAEQDE 217 (305)
Q Consensus 171 ~g~--------------------------~~~-----~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~--~~~~~~aE 217 (305)
+.. +.. ..++.+-.++|++||.....+.+....|...+. ..+.+...
T Consensus 83 g~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~asKaal~~lt~~lA 162 (242)
T d1cyda_ 83 ALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTKGAMTMLTKAMA 162 (242)
T ss_dssp CCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHH
T ss_pred ccccchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchhhccccCCccccccchHHHHHHHHHHHH
Confidence 310 011 122334568999999988776666666654432 22223333
Q ss_pred HHHHhCCCCEEEEecCCcccCC----CCCcce--eeecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEEEEecCC
Q 021928 218 SMLMASGIPYTIIRTGVLQNTP----GGKQGF--QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVNGE 286 (305)
Q Consensus 218 ~~l~~~gi~~tilRPg~l~~~~----~~~~~~--~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~v~~g~ 286 (305)
..+...++++..|.||++.... ...... .+....+...+..++|+|.+++.++.+.. -.|+++.|.+|-
T Consensus 163 ~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~R~~~peeva~~v~fL~S~~s~~itG~~i~vDGG~ 239 (242)
T d1cyda_ 163 MELGPHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKERHPLRKFAEVEDVVNSILFLLSDRSASTSGGGILVDAGY 239 (242)
T ss_dssp HHHGGGTEEEEEEEECCBTTHHHHHHTCCHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGGGTTCCSSEEEESTTG
T ss_pred HHhCccCeecccCCCCCccCHHHHhhcCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCcCCceEEeCcch
Confidence 4456789999999999964221 111000 00111122346789999999999986433 478999998874
|
| >d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: D(-)-3-hydroxybutyrate dehydrogenase species: Pseudomonas fragi [TaxId: 296]
Probab=99.69 E-value=2e-16 Score=139.19 Aligned_cols=190 Identities=15% Similarity=0.075 Sum_probs=130.0
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcch-hh-------hhcCCCcEEeecCCCCHHHHHHHhc-------
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-AM-------ESFGTYVESMAGDASNKKFLKTALR------- 161 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~-~~-------~~~~~~v~~v~~D~~d~~~~~~~~~------- 161 (305)
++|++|||||+++||++++++|+++|++|++..|+... .+ +..+.++.++.+|++|.++++++++
T Consensus 3 ~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G 82 (260)
T d1x1ta1 3 KGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMG 82 (260)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHHS
T ss_pred CcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHhC
Confidence 35999999999999999999999999999999997533 11 2234578899999999988877664
Q ss_pred CccEEEECCcch------------------------------HhhhhhhcCCCEEEEEcccccccCCCCcccccchHH--
Q 021928 162 GVRSIICPSEGF------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA-- 209 (305)
Q Consensus 162 ~~d~Vi~~~~g~------------------------------~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~-- 209 (305)
.+|++|++++.. ....+++.+-.+||++||..+..+.+....|...+.
T Consensus 83 ~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~asKaal 162 (260)
T d1x1ta1 83 RIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGV 162 (260)
T ss_dssp CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHHH
T ss_pred CCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCceEeecccccceeccCCcchhhhhhhhH
Confidence 579999884410 112245566679999999988877666666655432
Q ss_pred HHHHHHHHHHHHhCCCCEEEEecCCcccCCCCC--------ccee--------eecCCCCCCccCHHHHHHHHHHHhhCC
Q 021928 210 RKLAEQDESMLMASGIPYTIIRTGVLQNTPGGK--------QGFQ--------FEEGCAANGSLSKEDAAFICVEALESI 273 (305)
Q Consensus 210 ~~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~--------~~~~--------~~~~~~~~~~Is~~DvA~~iv~~l~~~ 273 (305)
..+.+.....+...++.+..|.||++....... .... +....+...+..++|+|++++.++.+.
T Consensus 163 ~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~pediA~~v~fL~S~~ 242 (260)
T d1x1ta1 163 VGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGGTAVFLASDA 242 (260)
T ss_dssp HHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------CHHHHCTTCCCBCHHHHHHHHHHHHSGG
T ss_pred HHhHHHHHHHhchhCcEEEEEecCCCCChhhhhhhhhhhhhcCCChHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhChh
Confidence 222233334456689999999999964321100 0000 001111234568999999999999643
Q ss_pred C--CCCcEEEEecCC
Q 021928 274 P--QTGLIFEVVNGE 286 (305)
Q Consensus 274 ~--~~~~~~~v~~g~ 286 (305)
. -.|+++.|.+|-
T Consensus 243 a~~itG~~i~vDGG~ 257 (260)
T d1x1ta1 243 AAQITGTTVSVDGGW 257 (260)
T ss_dssp GTTCCSCEEEESTTG
T ss_pred hCCCcCCEEEECcch
Confidence 3 478999999874
|
| >d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.69 E-value=1.2e-16 Score=138.92 Aligned_cols=186 Identities=14% Similarity=0.133 Sum_probs=126.5
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhc-------CccEEE
Q 021928 95 PEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR-------GVRSII 167 (305)
Q Consensus 95 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~-------~~d~Vi 167 (305)
..++|++|||||+++||++++++|+++|++|+++.|+.+.. .++..+.+|++|.++++++++ .+|++|
T Consensus 4 sl~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~-----~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDiLV 78 (237)
T d1uzma1 4 PFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAP-----KGLFGVEVDVTDSDAVDRAFTAVEEHQGPVEVLV 78 (237)
T ss_dssp CCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCC-----TTSEEEECCTTCHHHHHHHHHHHHHHHSSCSEEE
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcchh-----cCceEEEEecCCHHHHHHHHHHHHHhcCCceEEE
Confidence 44679999999999999999999999999999999987543 346789999999888776654 579999
Q ss_pred ECCcch------------------------------HhhhhhhcCCCEEEEEcccccccCCCCcccccchHH--HHHHHH
Q 021928 168 CPSEGF------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA--RKLAEQ 215 (305)
Q Consensus 168 ~~~~g~------------------------------~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~--~~~~~~ 215 (305)
++++.. .....++.+-.+||++||..+..+......|..++. ..+.+.
T Consensus 79 nnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~lt~~ 158 (237)
T d1uzma1 79 SNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGNQANYAASKAGVIGMARS 158 (237)
T ss_dssp EECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-----CCHHHHHHHHHHHHHHHH
T ss_pred eeecccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccCCCceEEEcchhhccCCcccHHHHHHHHHHHHHHHH
Confidence 874310 112245566779999999988776666656655432 222233
Q ss_pred HHHHHHhCCCCEEEEecCCcccCCC--CCcce--eeecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEEEEecC
Q 021928 216 DESMLMASGIPYTIIRTGVLQNTPG--GKQGF--QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVNG 285 (305)
Q Consensus 216 aE~~l~~~gi~~tilRPg~l~~~~~--~~~~~--~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~v~~g 285 (305)
....+...++++..|.||++..... ..+.. ......+...+..++|+|.+++.++.+.. -.|+++.+.+|
T Consensus 159 lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~s~~itG~~i~vdGG 234 (237)
T d1uzma1 159 IARELSKANVTANVVAPGYIDTDMTRALDERIQQGALQFIPAKRVGTPAEVAGVVSFLASEDASYISGAVIPVDGG 234 (237)
T ss_dssp HHHHHGGGTEEEEEEEECSBCCHHHHHSCHHHHHHHGGGCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred HHhhhhcCCceeeeeeeCcCCChhhhccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCCcCCeEEECCC
Confidence 3344667899999999999642211 00000 00011122346789999999999996433 46899999876
|
| >d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: R-specific alcohol dehydrogenase species: Lactobacillus brevis [TaxId: 1580]
Probab=99.69 E-value=2.6e-16 Score=137.92 Aligned_cols=190 Identities=14% Similarity=0.164 Sum_probs=129.7
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh-----cCCCcEEeecCCCCHHHHHHHhc-------Ccc
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-----FGTYVESMAGDASNKKFLKTALR-------GVR 164 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~-----~~~~v~~v~~D~~d~~~~~~~~~-------~~d 164 (305)
.+|+++||||+++||++++++|++.|++|++..|+++...+. .+.++.++.+|++|.++++++++ ++|
T Consensus 5 ~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iD 84 (251)
T d1zk4a1 5 DGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPVS 84 (251)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSCC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCCcEEEEEccCCCHHHHHHHHHHHHHHhCCce
Confidence 459999999999999999999999999999999998664321 23478999999999887766554 579
Q ss_pred EEEECCcch------------------------------HhhhhhhcCCC-EEEEEcccccccCCCCcccccchHHH--H
Q 021928 165 SIICPSEGF------------------------------ISNAGSLKGVQ-HVILLSQLSVYRGSGGIQALMKGNAR--K 211 (305)
Q Consensus 165 ~Vi~~~~g~------------------------------~~~~a~~~gv~-~~V~iSS~~~~~~~~~~~~~~~~~~~--~ 211 (305)
++|++++.. ....+++.+.. +||++||..+..+.+....|...+.. .
T Consensus 85 iLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~~~~~~~~~~Y~asKaal~~ 164 (251)
T d1zk4a1 85 TLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAVRI 164 (251)
T ss_dssp EEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCTTCHHHHHHHHHHHH
T ss_pred EEEeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeeccceeccCCCchhHHHHHHHHhc
Confidence 999874310 11123444544 88999999887766666666554421 1
Q ss_pred HHH--HHHHHHHhCCCCEEEEecCCcccC----CCCCcce-eeecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEEEE
Q 021928 212 LAE--QDESMLMASGIPYTIIRTGVLQNT----PGGKQGF-QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEV 282 (305)
Q Consensus 212 ~~~--~aE~~l~~~gi~~tilRPg~l~~~----~~~~~~~-~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~v 282 (305)
+.+ +.|..+...+|++..|.||++... ....... ......+..-+..++|||.+++.++.+.. -.|+++.|
T Consensus 165 lt~~lA~e~~l~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~s~~itG~~i~v 244 (251)
T d1zk4a1 165 MSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPGAEEAMSQRTKTPMGHIGEPNDIAYICVYLASNESKFATGSEFVV 244 (251)
T ss_dssp HHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTSTTHHHHHTSTTTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEE
T ss_pred chHHHHHHHhcCCCcEEEEEEeCCCCCChhHHhcCCHHHHHHHHhCCCCCCCcCHHHHHHHHHHHhCchhCCCcCcEEEE
Confidence 222 234446678999999999996421 1111100 00011122345689999999999986433 46899999
Q ss_pred ecCC
Q 021928 283 VNGE 286 (305)
Q Consensus 283 ~~g~ 286 (305)
.+|-
T Consensus 245 DGG~ 248 (251)
T d1zk4a1 245 DGGY 248 (251)
T ss_dssp STTG
T ss_pred Cccc
Confidence 8774
|
| >d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 7-alpha-hydroxysteroid dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=99.69 E-value=2.7e-16 Score=138.07 Aligned_cols=193 Identities=11% Similarity=0.095 Sum_probs=133.8
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh------hcCCCcEEeecCCCCHHHHHHHh-------c
Q 021928 95 PEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTAL-------R 161 (305)
Q Consensus 95 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~------~~~~~v~~v~~D~~d~~~~~~~~-------~ 161 (305)
...+|+++||||+++||++++++|++.|++|++..|++++..+ ..+.++.++++|++|.+++++++ .
T Consensus 8 ~L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~~~g 87 (255)
T d1fmca_ 8 RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLG 87 (255)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 3457999999999999999999999999999999999866332 23457889999999988876655 3
Q ss_pred CccEEEECCcch-----------------------------HhhhhhhcCCCEEEEEcccccccCCCCcccccchHH--H
Q 021928 162 GVRSIICPSEGF-----------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA--R 210 (305)
Q Consensus 162 ~~d~Vi~~~~g~-----------------------------~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~--~ 210 (305)
.+|++|++++.. .....++.+-.++|++||..+..+......|..++. .
T Consensus 88 ~iDilvnnAG~~~~~~~e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Ii~isS~~~~~~~~~~~~Y~asKaal~ 167 (255)
T d1fmca_ 88 KVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAAS 167 (255)
T ss_dssp SCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHHHHHHHH
T ss_pred CCCEeeeCCcCCCCCcccCCHHHHHHHHHHHHHHhhhhHHHHHhhhccccccccccccccchhccccccccchhHHHHHH
Confidence 679999884310 111234455568999999988877666666655432 2
Q ss_pred HHHHHHHHHHHhCCCCEEEEecCCcccCC--CC-Ccc--eeeecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEEEEe
Q 021928 211 KLAEQDESMLMASGIPYTIIRTGVLQNTP--GG-KQG--FQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVV 283 (305)
Q Consensus 211 ~~~~~aE~~l~~~gi~~tilRPg~l~~~~--~~-~~~--~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~v~ 283 (305)
.+.+.....+...++++..|.||++.... .. ... ..+....+...+..++|||.+++.++.+.. -.|+++.|.
T Consensus 168 ~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~e~~~~~~~~~pl~R~g~pedvA~~v~fL~S~~s~~itG~~i~vD 247 (255)
T d1fmca_ 168 HLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTPIRRLGQPQDIANAALFLCSPAASWVSGQILTVS 247 (255)
T ss_dssp HHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCCHHHHHHHHHTCSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred HHHHHHHHHhCccCeEEEEeeeCcCcChHhhccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCCcCCEEEEC
Confidence 22233334456789999999999964211 00 000 001111222345689999999999996433 478999999
Q ss_pred cCCc
Q 021928 284 NGEE 287 (305)
Q Consensus 284 ~g~~ 287 (305)
+|..
T Consensus 248 GG~~ 251 (255)
T d1fmca_ 248 GGGV 251 (255)
T ss_dssp TTSC
T ss_pred cCcc
Confidence 8863
|
| >d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus [TaxId: 274]
Probab=99.69 E-value=6.8e-16 Score=134.48 Aligned_cols=189 Identities=16% Similarity=0.125 Sum_probs=127.3
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhc-CCCcEEeecCCCCHHHHHHHhc-------CccEEEE
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF-GTYVESMAGDASNKKFLKTALR-------GVRSIIC 168 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-~~~v~~v~~D~~d~~~~~~~~~-------~~d~Vi~ 168 (305)
.+|+++||||+++||++++++|+++|++|++++|++++..+.. ..+++.+.+|++|.++++++++ .+|++|+
T Consensus 4 ~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVn 83 (242)
T d1ulsa_ 4 KDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERGFAEALAHLGRLDGVVH 83 (242)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHhcCCceEEEE
Confidence 4699999999999999999999999999999999987754432 2357899999999888876653 5799998
Q ss_pred CCcch------------------------------HhhhhhhcCCCEEEEEcccccccCCCCcccccchHH--HHHHHHH
Q 021928 169 PSEGF------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA--RKLAEQD 216 (305)
Q Consensus 169 ~~~g~------------------------------~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~--~~~~~~a 216 (305)
+++.. .....++.+-..++++||.. ..+..+...|...+. ..+.+..
T Consensus 84 nAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~~~i~~~ss~~-~~~~~~~~~Y~asKaal~~ltk~l 162 (242)
T d1ulsa_ 84 YAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRV-YLGNLGQANYAASMAGVVGLTRTL 162 (242)
T ss_dssp CCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGG-GGCCTTCHHHHHHHHHHHHHHHHH
T ss_pred CCcccccCchhhCcchhhhccccccchhhhhhhhhccccccccccceeeeecccc-ccCCCCCcchHHHHHHHHHHHHHH
Confidence 74310 11123445666777777754 334444455544332 2222333
Q ss_pred HHHHHhCCCCEEEEecCCcccCCCCCc--ce--eeecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEEEEecCC
Q 021928 217 ESMLMASGIPYTIIRTGVLQNTPGGKQ--GF--QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVNGE 286 (305)
Q Consensus 217 E~~l~~~gi~~tilRPg~l~~~~~~~~--~~--~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~v~~g~ 286 (305)
...+...++++..|.||++........ .. .+....+...+..++|+|.+++.++.+.. -.|+++.|.+|.
T Consensus 163 A~ela~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~pl~R~~~pedia~~v~fL~S~~s~~itG~~i~vDGG~ 238 (242)
T d1ulsa_ 163 ALELGRWGIRVNTLAPGFIETRMTAKVPEKVREKAIAATPLGRAGKPLEVAYAALFLLSDESSFITGQVLFVDGGR 238 (242)
T ss_dssp HHHHGGGTEEEEEEEECSBCCTTTSSSCHHHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred HHHHhhhCcEEEEEeeCcccChhhhcCCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhchhhCCCCCcEEEECCCc
Confidence 344567899999999999653322110 00 00011122345689999999999996433 478999998774
|
| >d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) species: Salmonella enterica serovar typhimurium [TaxId: 90371]
Probab=99.69 E-value=1.6e-16 Score=140.17 Aligned_cols=190 Identities=20% Similarity=0.172 Sum_probs=129.2
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCc--cEEEECCcc----
Q 021928 99 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGV--RSIICPSEG---- 172 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~--d~Vi~~~~g---- 172 (305)
|+|||||||||||++|+++|.++|+.| .+.+... .+.+|+.|.+.+++++++. |+|||+++-
T Consensus 1 MKILItG~tGfiG~~l~~~L~~~g~~v-~~~~~~~-----------~~~~Dl~~~~~~~~~i~~~~~D~Vih~Aa~~~~~ 68 (298)
T d1n2sa_ 1 MNILLFGKTGQVGWELQRSLAPVGNLI-ALDVHSK-----------EFCGDFSNPKGVAETVRKLRPDVIVNAAAHTAVD 68 (298)
T ss_dssp CEEEEECTTSHHHHHHHHHTTTTSEEE-EECTTCS-----------SSCCCTTCHHHHHHHHHHHCCSEEEECCCCCCHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEE-EEECCCc-----------cccCcCCCHHHHHHHHHHcCCCEEEEeccccccc
Confidence 789999999999999999999998754 4444331 1347999999999999865 999998431
Q ss_pred ------------------hHhhhhhhcCCCEEEEEcccccccCCCC--------cccccchHHHHHHHHHHHHHHhCCCC
Q 021928 173 ------------------FISNAGSLKGVQHVILLSQLSVYRGSGG--------IQALMKGNARKLAEQDESMLMASGIP 226 (305)
Q Consensus 173 ------------------~~~~~a~~~gv~~~V~iSS~~~~~~~~~--------~~~~~~~~~~~~~~~aE~~l~~~gi~ 226 (305)
.+.+++++.++ +++++||..++..... ..+. ......+..+|.+++.....
T Consensus 69 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~~ss~~~~~~~~~~~~~E~~~~~p~--~~y~~~k~~~e~~~~~~~~~ 145 (298)
T d1n2sa_ 69 KAESEPELAQLLNATSVEAIAKAANETGA-WVVHYSTDYVFPGTGDIPWQETDATSPL--NVYGKTKLAGEKALQDNCPK 145 (298)
T ss_dssp HHTTCHHHHHHHHTHHHHHHHHHHTTTTC-EEEEEEEGGGSCCCTTCCBCTTSCCCCS--SHHHHHHHHHHHHHHHHCSS
T ss_pred ccccCccccccccccccccchhhhhcccc-ccccccccccccCCCCCCCccccccCCC--chHhhhhhhhhhhHHhhhcc
Confidence 13445566664 6778888777653221 1111 12334466788888888888
Q ss_pred EEEEecCCcccCCCCC-----------cceeeecCCCCCCccCHHHHHHHHHHHhh---CCCCCCcEEEEecCC-cCHHH
Q 021928 227 YTIIRTGVLQNTPGGK-----------QGFQFEEGCAANGSLSKEDAAFICVEALE---SIPQTGLIFEVVNGE-EKVSD 291 (305)
Q Consensus 227 ~tilRPg~l~~~~~~~-----------~~~~~~~~~~~~~~Is~~DvA~~iv~~l~---~~~~~~~~~~v~~g~-~s~~d 291 (305)
+.++|++......+.. .......++....+++.+|+++++..++. .......+||+++++ .+..+
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~i~~~~~~~~~~~~~n~~~~~~~~~~~ 225 (298)
T d1n2sa_ 146 HLIFRTSWVYAGKGNNFAKTMLRLAKERQTLSVINDQYGAPTGAELLADCTAHAIRVALNKPEVAGLYHLVAGGTTTWHD 225 (298)
T ss_dssp EEEEEECSEECSSSCCHHHHHHHHHHHCSEEEEECSCEECCEEHHHHHHHHHHHHHHHHHCGGGCEEEECCCBSCEEHHH
T ss_pred cccccccceeeccCCccchhhhhhhcccceeecccceeecccccchHHHHHHHHHhhhhccccccccccccCCCceecHH
Confidence 8888887744332211 11112234445677899999999888775 233456899999855 58899
Q ss_pred HHHHHHHhhhhc
Q 021928 292 WKKCFSRLMEKT 303 (305)
Q Consensus 292 ~~~~~~~l~~~~ 303 (305)
+++.+.++....
T Consensus 226 ~~~~i~~~~~~~ 237 (298)
T d1n2sa_ 226 YAALVFDEARKA 237 (298)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHhhhhcc
Confidence 999888776553
|
| >d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Gluconate 5-dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=99.69 E-value=2.6e-16 Score=137.95 Aligned_cols=191 Identities=17% Similarity=0.099 Sum_probs=130.3
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhh-------hhcCCCcEEeecCCCCHHHHHHHhc-------
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM-------ESFGTYVESMAGDASNKKFLKTALR------- 161 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~-------~~~~~~v~~v~~D~~d~~~~~~~~~------- 161 (305)
..+|+++||||+++||++++++|+++|++|++++|+.++.. +..+.++.++.+|++|.++++++++
T Consensus 3 l~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 82 (251)
T d1vl8a_ 3 LRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFG 82 (251)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 35699999999999999999999999999999999976632 2335678899999999888776653
Q ss_pred CccEEEECCcch------------------------------HhhhhhhcCCCEEEEEccccccc-CCCCcccccchH--
Q 021928 162 GVRSIICPSEGF------------------------------ISNAGSLKGVQHVILLSQLSVYR-GSGGIQALMKGN-- 208 (305)
Q Consensus 162 ~~d~Vi~~~~g~------------------------------~~~~a~~~gv~~~V~iSS~~~~~-~~~~~~~~~~~~-- 208 (305)
.+|++|++++.. ....+++.+-.++|++||..+.. +......|..++
T Consensus 83 ~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~~~~~~~~~~~~~Y~asKaa 162 (251)
T d1vl8a_ 83 KLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMPNISAYAASKGG 162 (251)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCCSSSCHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccchhccccCccccchHHHHHh
Confidence 679999884310 11224456667999998876543 444444555433
Q ss_pred HHHHHHHHHHHHHhCCCCEEEEecCCcccCCCC----Ccce--eeecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEE
Q 021928 209 ARKLAEQDESMLMASGIPYTIIRTGVLQNTPGG----KQGF--QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIF 280 (305)
Q Consensus 209 ~~~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~----~~~~--~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~ 280 (305)
...+.+.....+...++++..|.||++...... .... .+....+...+..++|||++++.++.+.. -.|+++
T Consensus 163 l~~lt~~lA~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~a~~itG~~i 242 (251)
T d1vl8a_ 163 VASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRIPLGRTGVPEDLKGVAVFLASEEAKYVTGQII 242 (251)
T ss_dssp HHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTCHHHHHHHHHTCTTSSCBCGGGGHHHHHHHHSGGGTTCCSCEE
T ss_pred HHHHHHHHHHHhcccCeEEEEEeeCcccCHHHHhccCCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCchhCCCcCcEE
Confidence 222233333446678999999999996533211 0000 00011122345688999999999986433 468999
Q ss_pred EEecCC
Q 021928 281 EVVNGE 286 (305)
Q Consensus 281 ~v~~g~ 286 (305)
.|.+|-
T Consensus 243 ~vDGG~ 248 (251)
T d1vl8a_ 243 FVDGGW 248 (251)
T ss_dssp EESTTG
T ss_pred EeCcCe
Confidence 998774
|
| >d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), I [TaxId: 4076]
Probab=99.68 E-value=7.9e-16 Score=135.32 Aligned_cols=191 Identities=14% Similarity=0.105 Sum_probs=130.1
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh------hcCCCcEEeecCCCCHHHHHHHhc-------C
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTALR-------G 162 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~------~~~~~v~~v~~D~~d~~~~~~~~~-------~ 162 (305)
.++|++|||||+++||++++++|+++|++|++++|++++..+ ..+..+.++.+|+++.++++++++ +
T Consensus 4 L~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~g 83 (258)
T d1ae1a_ 4 LKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDG 83 (258)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTS
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHHhCC
Confidence 456999999999999999999999999999999999866332 234567889999999888766553 3
Q ss_pred -ccEEEECCcch------------------------------HhhhhhhcCCCEEEEEcccccccCCCCcccccchH--H
Q 021928 163 -VRSIICPSEGF------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGN--A 209 (305)
Q Consensus 163 -~d~Vi~~~~g~------------------------------~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~--~ 209 (305)
+|+++++++.. ......+.+..++|++||..+..+.+....|...+ .
T Consensus 84 ~idilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~al 163 (258)
T d1ae1a_ 84 KLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASKGAI 163 (258)
T ss_dssp CCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCCTTCHHHHHHHHHH
T ss_pred CcEEEeccccccccCccccCCHHHHhhhhhhccccccccccccccccccccccccccccccccccccccchhHHHHHHHH
Confidence 68888774310 11224456778999999999887766666664433 2
Q ss_pred HHHHHHHHHHHHhCCCCEEEEecCCcccCCC-CC-------cce--eeecCCCCCCccCHHHHHHHHHHHhhCCC--CCC
Q 021928 210 RKLAEQDESMLMASGIPYTIIRTGVLQNTPG-GK-------QGF--QFEEGCAANGSLSKEDAAFICVEALESIP--QTG 277 (305)
Q Consensus 210 ~~~~~~aE~~l~~~gi~~tilRPg~l~~~~~-~~-------~~~--~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~ 277 (305)
..+.+.....+...+|++..|.||++..+.. .. +.. .+....+..-+.+++|+|.+++.++.+.. -.|
T Consensus 164 ~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~plgR~~~pediA~~v~fL~S~~s~~itG 243 (258)
T d1ae1a_ 164 NQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQEVSALIAFLCFPAASYITG 243 (258)
T ss_dssp HHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHHSTTCSCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred HHHHHHHHHhcCcCcEEEEEEeeCcccCcchhhhhhhhhhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhChhhCCCcC
Confidence 2222333344556899999999999643211 00 000 00011122346789999999999995433 478
Q ss_pred cEEEEecCC
Q 021928 278 LIFEVVNGE 286 (305)
Q Consensus 278 ~~~~v~~g~ 286 (305)
+++.|.+|-
T Consensus 244 ~~i~vDGG~ 252 (258)
T d1ae1a_ 244 QIIWADGGF 252 (258)
T ss_dssp CEEEESTTG
T ss_pred cEEEeCCCe
Confidence 999998774
|
| >d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase species: Bacillus megaterium [TaxId: 1404]
Probab=99.67 E-value=5e-16 Score=136.87 Aligned_cols=191 Identities=12% Similarity=0.072 Sum_probs=130.2
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchh-h------hhcCCCcEEeecCCCCHHHHHHHhc-------
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-M------ESFGTYVESMAGDASNKKFLKTALR------- 161 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~-~------~~~~~~v~~v~~D~~d~~~~~~~~~------- 161 (305)
..+|+++||||+++||++++++|+++|++|++..|+.+.. . +..+.++..+++|++|.++++++++
T Consensus 5 L~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G 84 (261)
T d1geea_ 5 LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFG 84 (261)
T ss_dssp GTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 4569999999999999999999999999999999986531 1 1234578899999999888876664
Q ss_pred CccEEEECCcch------------------------------HhhhhhhcC-CCEEEEEcccccccCCCCcccccchHH-
Q 021928 162 GVRSIICPSEGF------------------------------ISNAGSLKG-VQHVILLSQLSVYRGSGGIQALMKGNA- 209 (305)
Q Consensus 162 ~~d~Vi~~~~g~------------------------------~~~~a~~~g-v~~~V~iSS~~~~~~~~~~~~~~~~~~- 209 (305)
.+|++|++++.. ......+.+ -.+||++||.....+.+....|...+.
T Consensus 85 ~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~~~~~~~~~~Y~asKaa 164 (261)
T d1geea_ 85 KLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGG 164 (261)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred CCCEeeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccccccccccccchhcccCccccccccCCcc
Confidence 679999884310 111233344 346889999988766665556654432
Q ss_pred -HHHHHHHHHHHHhCCCCEEEEecCCcccCCCC----Ccc--eeeecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEE
Q 021928 210 -RKLAEQDESMLMASGIPYTIIRTGVLQNTPGG----KQG--FQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIF 280 (305)
Q Consensus 210 -~~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~----~~~--~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~ 280 (305)
..+.+.....+...+|++..|.||++...... ... ..+....+...+..++|||.+++.++.+.. -.|+++
T Consensus 165 l~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~R~~~pediA~~v~fL~S~~s~~itG~~i 244 (261)
T d1geea_ 165 MKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMGYIGEPEEIAAVAAWLASSEASYVTGITL 244 (261)
T ss_dssp HHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHSHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred chhhHHHHHHHhhhhCcEEEEEeeCcCcCHhHhhhcCCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCchhcCCcCCeE
Confidence 22223333456678999999999996432210 000 001111122345689999999999996433 478999
Q ss_pred EEecCC
Q 021928 281 EVVNGE 286 (305)
Q Consensus 281 ~v~~g~ 286 (305)
.|.+|.
T Consensus 245 ~vDGG~ 250 (261)
T d1geea_ 245 FADGGM 250 (261)
T ss_dssp EESTTG
T ss_pred EECCCe
Confidence 999875
|
| >d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Bacterial sepiapterin reductase species: Chlorobium tepidum [TaxId: 1097]
Probab=99.67 E-value=1e-15 Score=133.25 Aligned_cols=171 Identities=12% Similarity=0.112 Sum_probs=121.4
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCCe-------EEEEEcCcchhhhh------cCCCcEEeecCCCCHHHHHHHhc----
Q 021928 99 DAVLVTDGDSDIGQMVILSLIVKRTR-------IKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR---- 161 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~~~g~~-------V~~~~R~~~~~~~~------~~~~v~~v~~D~~d~~~~~~~~~---- 161 (305)
+.||||||+++||++++++|+++|++ |++..|++++..+. .+.++.++.+|++|.++++++++
T Consensus 2 ~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~ 81 (240)
T d2bd0a1 2 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVE 81 (240)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence 45899999999999999999999987 88889987664321 24567889999999888776554
Q ss_pred ---CccEEEECCcch------------------------------HhhhhhhcCCCEEEEEcccccccCCCCcccccchH
Q 021928 162 ---GVRSIICPSEGF------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGN 208 (305)
Q Consensus 162 ---~~d~Vi~~~~g~------------------------------~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~ 208 (305)
.+|++|++++.. ....+++.+-.++|++||..+..+.+....|..++
T Consensus 82 ~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asK 161 (240)
T d2bd0a1 82 RYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAFRHSSIYCMSK 161 (240)
T ss_dssp HTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred HcCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEechhhcCCCCCChHHHHHH
Confidence 579999874310 12224556667999999998887766666665544
Q ss_pred H--HHHHHHHHHHHHhCCCCEEEEecCCcccCCCCCcceeeecCCCCCCccCHHHHHHHHHHHhhCCC
Q 021928 209 A--RKLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIP 274 (305)
Q Consensus 209 ~--~~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~~~~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~ 274 (305)
. ..+.+.....+...+++++.|.||++.......- ..........++|+|++++.++.++.
T Consensus 162 ~al~~lt~~la~el~~~gIrvn~i~PG~v~T~~~~~~-----~~~~~~~~~~PedvA~~v~~l~s~~~ 224 (240)
T d2bd0a1 162 FGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKV-----DDEMQALMMMPEDIAAPVVQAYLQPS 224 (240)
T ss_dssp HHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCC-----CSTTGGGSBCHHHHHHHHHHHHTSCT
T ss_pred HHHHHHHHHHHHHhCcCCeEEEEeeeCcccCchhhhc-----CHhhHhcCCCHHHHHHHHHHHHcCCc
Confidence 2 2233334445667899999999999643322110 11122345689999999999998765
|
| >d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: meso-2,3-butanediol dehydrogenase species: Klebsiella pneumoniae [TaxId: 573]
Probab=99.67 E-value=1.1e-15 Score=133.97 Aligned_cols=188 Identities=16% Similarity=0.085 Sum_probs=128.5
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh------hcCCCcEEeecCCCCHHHHHHHh-------cCccE
Q 021928 99 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTAL-------RGVRS 165 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~------~~~~~v~~v~~D~~d~~~~~~~~-------~~~d~ 165 (305)
|.+|||||+++||++++++|+++|++|++..|++++..+ ..+.++.++.+|++|.+++++++ ..+|+
T Consensus 2 KValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi 81 (255)
T d1gega_ 2 KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDV 81 (255)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCCE
T ss_pred CEEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCccE
Confidence 567999999999999999999999999999999876432 23457889999999988877665 36799
Q ss_pred EEECCcc----h----------------------H----hhhh-hhcCCCEEEEEcccccccCCCCcccccchHH--HHH
Q 021928 166 IICPSEG----F----------------------I----SNAG-SLKGVQHVILLSQLSVYRGSGGIQALMKGNA--RKL 212 (305)
Q Consensus 166 Vi~~~~g----~----------------------~----~~~a-~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~--~~~ 212 (305)
+|++++. . + .... +..+-.++|++||..+..+.+....|...+. ..+
T Consensus 82 lVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~l 161 (255)
T d1gega_ 82 IVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVRGL 161 (255)
T ss_dssp EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHH
T ss_pred EEecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccchhhcccCcccccchhCHHHHHhh
Confidence 9987431 0 0 1112 2234568999999988777666666655432 222
Q ss_pred HHHHHHHHHhCCCCEEEEecCCcccCCC------------CC-cc--eeeecCCCCCCccCHHHHHHHHHHHhhCCC--C
Q 021928 213 AEQDESMLMASGIPYTIIRTGVLQNTPG------------GK-QG--FQFEEGCAANGSLSKEDAAFICVEALESIP--Q 275 (305)
Q Consensus 213 ~~~aE~~l~~~gi~~tilRPg~l~~~~~------------~~-~~--~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~ 275 (305)
.+.....+...|+++..|.||++..... .. .. ..+....+...+..++|+|.+++.++.+.. -
T Consensus 162 tk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~peevA~~v~fL~S~~a~~i 241 (255)
T d1gega_ 162 TQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACVSYLASPDSDYM 241 (255)
T ss_dssp HHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred HHHHHHHhhhhCcEEEEEecCcccChHHhhhhhhhHhhhcccchhHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhCCc
Confidence 3333344667899999999999642110 00 00 000111122346789999999999996433 4
Q ss_pred CCcEEEEecCC
Q 021928 276 TGLIFEVVNGE 286 (305)
Q Consensus 276 ~~~~~~v~~g~ 286 (305)
.|+++.|.+|-
T Consensus 242 tG~~i~vDGG~ 252 (255)
T d1gega_ 242 TGQSLLIDGGM 252 (255)
T ss_dssp CSCEEEESSSS
T ss_pred cCcEEEecCCE
Confidence 68999998874
|
| >d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Levodione reductase species: Corynebacterium aquaticum [TaxId: 144185]
Probab=99.67 E-value=9.2e-16 Score=134.89 Aligned_cols=190 Identities=13% Similarity=0.135 Sum_probs=131.5
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh--------cCCCcEEeecCCCCHHHHHHHh-------c
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES--------FGTYVESMAGDASNKKFLKTAL-------R 161 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~--------~~~~v~~v~~D~~d~~~~~~~~-------~ 161 (305)
.+|+++||||+++||++++++|+++|++|++..|++++..+. .+.++..+++|++|.+++++++ .
T Consensus 3 ~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~G 82 (258)
T d1iy8a_ 3 TDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFG 82 (258)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHHhC
Confidence 459999999999999999999999999999999998663221 1346888999999988887665 4
Q ss_pred CccEEEECCc-----ch--------------------------HhhhhhhcCCCEEEEEcccccccCCCCcccccchHH-
Q 021928 162 GVRSIICPSE-----GF--------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA- 209 (305)
Q Consensus 162 ~~d~Vi~~~~-----g~--------------------------~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~- 209 (305)
.+|++|++++ +. ....+++.+-.+||++||..+..+.+....|..++.
T Consensus 83 ~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asKaa 162 (258)
T d1iy8a_ 83 RIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAAAKHG 162 (258)
T ss_dssp CCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBCSSBHHHHHHHHH
T ss_pred CCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCCCCcccccHhhccCCCCchHHHHHHHH
Confidence 6799998743 10 111234456679999999988776666666655432
Q ss_pred -HHHHHHHHHHHHhCCCCEEEEecCCcccCC----------CCCcce--eeecCCCCCCccCHHHHHHHHHHHhhCCC--
Q 021928 210 -RKLAEQDESMLMASGIPYTIIRTGVLQNTP----------GGKQGF--QFEEGCAANGSLSKEDAAFICVEALESIP-- 274 (305)
Q Consensus 210 -~~~~~~aE~~l~~~gi~~tilRPg~l~~~~----------~~~~~~--~~~~~~~~~~~Is~~DvA~~iv~~l~~~~-- 274 (305)
..+.+.....+...+|++..|.||++.... ...+.. .+....+...+..++|+|.+++.++.+..
T Consensus 163 l~~lt~~lA~el~~~gIrVN~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~p~dvA~~v~fL~S~~s~~ 242 (258)
T d1iy8a_ 163 VVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEAPEIAAVVAFLLSDDASY 242 (258)
T ss_dssp HHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTCTTCSCBCHHHHHHHHHHHTSGGGTT
T ss_pred HHHHHHHHHHHhCccCceEEEEeeCcccCHHHHHHHhhcCcccHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcC
Confidence 222233334466789999999999964211 000000 00011122345789999999999996433
Q ss_pred CCCcEEEEecCC
Q 021928 275 QTGLIFEVVNGE 286 (305)
Q Consensus 275 ~~~~~~~v~~g~ 286 (305)
-.|+++.|.+|.
T Consensus 243 itG~~i~VDGG~ 254 (258)
T d1iy8a_ 243 VNATVVPIDGGQ 254 (258)
T ss_dssp CCSCEEEESTTT
T ss_pred CcCceEEcCcch
Confidence 478999999875
|
| >d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.67 E-value=5.7e-16 Score=136.32 Aligned_cols=192 Identities=15% Similarity=0.094 Sum_probs=119.9
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh------cCCCcEEeecCCCCHHHHHHHhc-------
Q 021928 95 PEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR------- 161 (305)
Q Consensus 95 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~~~v~~v~~D~~d~~~~~~~~~------- 161 (305)
+.++|+++||||+++||++++++|++.|++|++++|++++..+. ...++..+.+|++|.++++++++
T Consensus 5 ~LkgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~ 84 (259)
T d1xq1a_ 5 SLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFG 84 (259)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHT
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHHHhC
Confidence 44679999999999999999999999999999999998764322 23468899999999877765442
Q ss_pred C-ccEEEECCcch------------------------------HhhhhhhcCCCEEEEEcccccccCCCCcccccchHH-
Q 021928 162 G-VRSIICPSEGF------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA- 209 (305)
Q Consensus 162 ~-~d~Vi~~~~g~------------------------------~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~- 209 (305)
+ +|++|++++.. ....+++.+-.+||++||.....+......|...+.
T Consensus 85 g~idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~asKaa 164 (259)
T d1xq1a_ 85 GKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSATKGA 164 (259)
T ss_dssp TCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC----------CCHHHHHHHH
T ss_pred CCcccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhcccccccccccccccccccccccccccccccccc
Confidence 3 79999874310 112244566779999999988766555555654432
Q ss_pred -HHHHHHHHHHHHhCCCCEEEEecCCcccCCCC----Ccce-eeecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEEE
Q 021928 210 -RKLAEQDESMLMASGIPYTIIRTGVLQNTPGG----KQGF-QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFE 281 (305)
Q Consensus 210 -~~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~----~~~~-~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~ 281 (305)
..+.+.....+...++++..|.||++...... .+.. .+....+...+.+++|||.+++.++.+.. -.|+++.
T Consensus 165 l~~lt~~lA~e~~~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~s~~iTG~~i~ 244 (259)
T d1xq1a_ 165 LNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYDDEFKKVVISRKPLGRFGEPEEVSSLVAFLCMPAASYITGQTIC 244 (259)
T ss_dssp HHHHHHHHHHHHGGGTCEEEEEECCSCC-------------------------CCGGGGHHHHHHHTSGGGTTCCSCEEE
T ss_pred hhhhhHHHHHHhcccCeEEEEeccCcccCHHhhhhchHHHHHHHHhCCCCCCCcCHHHHHHHHHHHhCchhcCCcCcEEE
Confidence 22223333446678999999999996432110 0000 00011112335578999999999986433 4689999
Q ss_pred EecCC
Q 021928 282 VVNGE 286 (305)
Q Consensus 282 v~~g~ 286 (305)
|.+|-
T Consensus 245 vDGG~ 249 (259)
T d1xq1a_ 245 VDGGL 249 (259)
T ss_dssp CCCCE
T ss_pred eCCCE
Confidence 98774
|
| >d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 15-hydroxyprostaglandin dehydrogenase, PGDH species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.66 E-value=4e-16 Score=136.89 Aligned_cols=189 Identities=15% Similarity=0.137 Sum_probs=129.8
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh-------hc-CCCcEEeecCCCCHHHHHHHhc-------C
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME-------SF-GTYVESMAGDASNKKFLKTALR-------G 162 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~-------~~-~~~v~~v~~D~~d~~~~~~~~~-------~ 162 (305)
+|++|||||+++||++++++|+++|++|++++|+.++..+ .. +.++.++.+|++|.++++++++ .
T Consensus 3 GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~ 82 (254)
T d2gdza1 3 GKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFGR 82 (254)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHcCC
Confidence 5999999999999999999999999999999999765321 11 2368889999999888876663 6
Q ss_pred ccEEEECCcch----------------------Hhhhhhhc---CCCEEEEEcccccccCCCCcccccchHH--HHHHH-
Q 021928 163 VRSIICPSEGF----------------------ISNAGSLK---GVQHVILLSQLSVYRGSGGIQALMKGNA--RKLAE- 214 (305)
Q Consensus 163 ~d~Vi~~~~g~----------------------~~~~a~~~---gv~~~V~iSS~~~~~~~~~~~~~~~~~~--~~~~~- 214 (305)
+|++|++++.. ....+.+. .-.+||++||..+..+.+....|...+. ..+.+
T Consensus 83 iDilVnnAg~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~ltrs 162 (254)
T d2gdza1 83 LDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTRS 162 (254)
T ss_dssp CCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHH
T ss_pred cCeecccccccccccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhccCCCCccchHHHHHHHHHHHHH
Confidence 79999884410 11112222 2357999999988877666666655442 22222
Q ss_pred -HHHHHHHhCCCCEEEEecCCcccCC----CCC----ccee----eecCCCCCCccCHHHHHHHHHHHhhCCCCCCcEEE
Q 021928 215 -QDESMLMASGIPYTIIRTGVLQNTP----GGK----QGFQ----FEEGCAANGSLSKEDAAFICVEALESIPQTGLIFE 281 (305)
Q Consensus 215 -~aE~~l~~~gi~~tilRPg~l~~~~----~~~----~~~~----~~~~~~~~~~Is~~DvA~~iv~~l~~~~~~~~~~~ 281 (305)
..+..+...++++..|.||++.... ... .... +....+......++|||++++.++.++.-.|+++.
T Consensus 163 ~ala~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~fL~s~~~itG~~i~ 242 (254)
T d2gdza1 163 AALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPPLIANGLITLIEDDALNGAIMK 242 (254)
T ss_dssp HHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHHHHHHHCCBCHHHHHHHHHHHHHCTTCSSCEEE
T ss_pred HHHHHHhcCCCEEEEEEEcCCCCChhhhhccccccccccHHHHHHHHhcCCCCCCcCHHHHHHHHHHHHcCCCCCCCEEE
Confidence 1234466789999999999963211 000 0000 00000112456889999999999987777899999
Q ss_pred EecCC
Q 021928 282 VVNGE 286 (305)
Q Consensus 282 v~~g~ 286 (305)
|.+|.
T Consensus 243 VdGG~ 247 (254)
T d2gdza1 243 ITTSK 247 (254)
T ss_dssp EETTT
T ss_pred ECCCC
Confidence 99875
|
| >d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermotoga maritima [TaxId: 2336]
Probab=99.65 E-value=1.7e-15 Score=131.11 Aligned_cols=187 Identities=15% Similarity=0.097 Sum_probs=130.6
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCC-HHHHHHHhcCccEEEECCcch--
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASN-KKFLKTALRGVRSIICPSEGF-- 173 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d-~~~~~~~~~~~d~Vi~~~~g~-- 173 (305)
++|++|||||+++||++++++|+++|++|++++|+++...+. ..+++.+|+++ .+.+.+.+..+|++|++++..
T Consensus 3 kgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~l~~~---~~~~~~~Dv~~~~~~~~~~~g~iD~lVnnAG~~~~ 79 (234)
T d1o5ia_ 3 RDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRS---GHRYVVCDLRKDLDLLFEKVKEVDILVLNAGGPKA 79 (234)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHT---CSEEEECCTTTCHHHHHHHSCCCSEEEECCCCCCC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHhc---CCcEEEcchHHHHHHHHHHhCCCcEEEecccccCC
Confidence 459999999999999999999999999999999998665432 35778899986 566777888999999874310
Q ss_pred ----------------------------HhhhhhhcCCCEEEEEcccccccCCCCcccccchHH--HHHHHHHHHHHHhC
Q 021928 174 ----------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA--RKLAEQDESMLMAS 223 (305)
Q Consensus 174 ----------------------------~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~--~~~~~~aE~~l~~~ 223 (305)
.....++.+-.++|++||.....+......|...+. ..+.+.....+...
T Consensus 80 ~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~G~ii~i~S~~~~~~~~~~~~Y~asKaal~~ltk~lA~ela~~ 159 (234)
T d1o5ia_ 80 GFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIENLYTSNSARMALTGFLKTLSFEVAPY 159 (234)
T ss_dssp BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGG
T ss_pred cchhhhhhHHHHHHhhhhhhhhhhhhhcccccccccccccccccccccccccccccccchhHHHHHHHHHHHHHHHhccc
Confidence 111234566679999999887766666655544322 22223333446678
Q ss_pred CCCEEEEecCCcccCCCC---Cc--ceeeecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEEEEecCC
Q 021928 224 GIPYTIIRTGVLQNTPGG---KQ--GFQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVNGE 286 (305)
Q Consensus 224 gi~~tilRPg~l~~~~~~---~~--~~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~v~~g~ 286 (305)
++++..|.||++...... .+ ...+....+...+..++|+|.+++.++.+.. -.|+++.|.+|-
T Consensus 160 gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~pl~R~~~pediA~~v~fL~S~~s~~itG~~i~vDGG~ 229 (234)
T d1o5ia_ 160 GITVNCVAPGWTETERVKELLSEEKKKQVESQIPMRRMAKPEEIASVVAFLCSEKASYLTGQTIVVDGGL 229 (234)
T ss_dssp TEEEEEEEECSBCCTTHHHHSCHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred CeEEeecccCccchhhhhhhcCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhChhhcCCcCcEEEECccc
Confidence 999999999996433210 00 0001111223446789999999999986433 468999998875
|
| >d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Retinal dehydrogenase/reductase 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.65 E-value=9.9e-16 Score=134.10 Aligned_cols=189 Identities=14% Similarity=0.050 Sum_probs=129.9
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh--cCCCcEEeecCCCCHHHHHHHhc-------CccEEE
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES--FGTYVESMAGDASNKKFLKTALR-------GVRSII 167 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~--~~~~v~~v~~D~~d~~~~~~~~~-------~~d~Vi 167 (305)
.+|+++||||+++||+++++.|+++|++|++++|++++..+. ...++.++.+|++|.++++++++ .+|++|
T Consensus 5 ~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iDilV 84 (250)
T d1ydea1 5 AGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDCVV 84 (250)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcCCCeEEEccCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence 469999999999999999999999999999999998764332 22468899999999888876654 579999
Q ss_pred ECCcc-----h--------------------------HhhhhhhcCCCEEEEEcccccccCCCCcccccchHH--HHHHH
Q 021928 168 CPSEG-----F--------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA--RKLAE 214 (305)
Q Consensus 168 ~~~~g-----~--------------------------~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~--~~~~~ 214 (305)
++++. . ....+++.+ .++|++||..+..+.+....|...+. ..+.+
T Consensus 85 nnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~-G~Ii~isS~~~~~~~~~~~~Y~asKaal~~lt~ 163 (250)
T d1ydea1 85 NNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQ-GNVINISSLVGAIGQAQAVPYVATKGAVTAMTK 163 (250)
T ss_dssp ECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCHHHHHCCTTCHHHHHHHHHHHHHHH
T ss_pred ecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCC-CCCcccccccccccccCcchhHHHHhhHHHHHH
Confidence 87431 0 111233344 69999999988777666666655432 22223
Q ss_pred HHHHHHHhCCCCEEEEecCCcccCC-------CCCcceee---ecCCCCCCccCHHHHHHHHHHHhhCCC-CCCcEEEEe
Q 021928 215 QDESMLMASGIPYTIIRTGVLQNTP-------GGKQGFQF---EEGCAANGSLSKEDAAFICVEALESIP-QTGLIFEVV 283 (305)
Q Consensus 215 ~aE~~l~~~gi~~tilRPg~l~~~~-------~~~~~~~~---~~~~~~~~~Is~~DvA~~iv~~l~~~~-~~~~~~~v~ 283 (305)
.....+...+|++..|.||++.... .......+ ....+..-+..++|+|.+++.++.+.. -.|+++.|.
T Consensus 164 ~lA~e~a~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl~R~g~p~eva~~v~fL~Sda~~itG~~i~vD 243 (250)
T d1ydea1 164 ALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPLGRMGQPAEVGAAAVFLASEANFCTGIELLVT 243 (250)
T ss_dssp HHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHHHCTTCCSCEEEES
T ss_pred HHHHHhcccCeEEEEEeeCCCCChhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCccCCCcCCeEEEC
Confidence 3334456789999999999964211 00000000 011122346789999999999986422 378999998
Q ss_pred cCC
Q 021928 284 NGE 286 (305)
Q Consensus 284 ~g~ 286 (305)
+|.
T Consensus 244 GG~ 246 (250)
T d1ydea1 244 GGA 246 (250)
T ss_dssp TTT
T ss_pred CCc
Confidence 774
|
| >d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Rhizome secoisolariciresinol dehydrogenase species: Mayapple (Podophyllum peltatum) [TaxId: 35933]
Probab=99.65 E-value=3.7e-15 Score=131.56 Aligned_cols=191 Identities=9% Similarity=0.074 Sum_probs=128.9
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh---c--CCCcEEeecCCCCHHHHHHHhc-------Ccc
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---F--GTYVESMAGDASNKKFLKTALR-------GVR 164 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~--~~~v~~v~~D~~d~~~~~~~~~-------~~d 164 (305)
.+|++|||||+++||++++++|+++|++|++++|++++..+. + ...+.++.+|++|.++++++++ .+|
T Consensus 5 ~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD 84 (268)
T d2bgka1 5 QDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKLD 84 (268)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCCceEEEEccCCCHHHHHHHHHHHHHHcCCcc
Confidence 469999999999999999999999999999999998764322 1 2357889999999988877664 579
Q ss_pred EEEECCcc------h--------------------------HhhhhhhcCCCEEEEEcccccccCCCCcc-cccchH--H
Q 021928 165 SIICPSEG------F--------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQ-ALMKGN--A 209 (305)
Q Consensus 165 ~Vi~~~~g------~--------------------------~~~~a~~~gv~~~V~iSS~~~~~~~~~~~-~~~~~~--~ 209 (305)
++|++++. . ....+.+.+-.++|++||........+.. .|...+ .
T Consensus 85 ~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~~Y~asKaal 164 (268)
T d2bgka1 85 IMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYTATKHAV 164 (268)
T ss_dssp EEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCTTSCHHHHHHHHHH
T ss_pred eeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcCCCCccccccccccccccccccccchhHHHH
Confidence 99987431 0 11123446667999999887765443332 343322 2
Q ss_pred HHHHHHHHHHHHhCCCCEEEEecCCcccCCCCC----ccee-----eecCCCCCCccCHHHHHHHHHHHhhCCC--CCCc
Q 021928 210 RKLAEQDESMLMASGIPYTIIRTGVLQNTPGGK----QGFQ-----FEEGCAANGSLSKEDAAFICVEALESIP--QTGL 278 (305)
Q Consensus 210 ~~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~----~~~~-----~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~ 278 (305)
..+.+.....+...++++..|.||++....... .... .........+..++|||++++.++.+.. -.|+
T Consensus 165 ~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~gr~~~pedvA~~v~fL~S~~s~~itGq 244 (268)
T d2bgka1 165 LGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAEDVADAVAYLAGDESKYVSGL 244 (268)
T ss_dssp HHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTCSSCSCCCCHHHHHHHHHHHHSGGGTTCCSC
T ss_pred HhCHHHHHHHhChhCeEEEecCCCCccChHHhhhhcCCHHHHHHHHHhccccCCCCcCHHHHHHHHHHHhChhhCCccCc
Confidence 222233334456789999999999964322110 0000 0011122346789999999999996433 4689
Q ss_pred EEEEecCCc
Q 021928 279 IFEVVNGEE 287 (305)
Q Consensus 279 ~~~v~~g~~ 287 (305)
++.|.+|-.
T Consensus 245 ~i~VDGG~t 253 (268)
T d2bgka1 245 NLVIDGGYT 253 (268)
T ss_dssp EEEESTTGG
T ss_pred eEEECcCcc
Confidence 999998853
|
| >d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=99.65 E-value=7.7e-16 Score=134.31 Aligned_cols=187 Identities=15% Similarity=0.137 Sum_probs=127.3
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCCeEEEEEc-Ccchhh------hhcCCCcEEeecCCCCHHHHHHHhc-------Ccc
Q 021928 99 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVK-DKRNAM------ESFGTYVESMAGDASNKKFLKTALR-------GVR 164 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R-~~~~~~------~~~~~~v~~v~~D~~d~~~~~~~~~-------~~d 164 (305)
+.||||||+++||++++++|+++|++|++.++ +++... +..+.++.++.+|++|.++++++++ .+|
T Consensus 2 pV~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD 81 (244)
T d1edoa_ 2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTID 81 (244)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCS
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence 57999999999999999999999999998755 443321 2245678899999999988876654 579
Q ss_pred EEEECCcch------------------------------HhhhhhhcCCCEEEEEcccccccCCCCcccccchHH--HHH
Q 021928 165 SIICPSEGF------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA--RKL 212 (305)
Q Consensus 165 ~Vi~~~~g~------------------------------~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~--~~~ 212 (305)
++|++++.. ....+++.+-.+||++||..+..+......|...+. ..+
T Consensus 82 iLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~~~~~Y~asKaal~~l 161 (244)
T d1edoa_ 82 VVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGF 161 (244)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHHHHHHH
T ss_pred ccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcChhhcCCCCCCHHHHHHHHHHHHC
Confidence 999874310 112244456679999999988877666666655432 222
Q ss_pred HHHHHHHHHhCCCCEEEEecCCcccCC-C-CCcc--eeeecCCCCCCccCHHHHHHHHHHHhhCCC---CCCcEEEEecC
Q 021928 213 AEQDESMLMASGIPYTIIRTGVLQNTP-G-GKQG--FQFEEGCAANGSLSKEDAAFICVEALESIP---QTGLIFEVVNG 285 (305)
Q Consensus 213 ~~~aE~~l~~~gi~~tilRPg~l~~~~-~-~~~~--~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~---~~~~~~~v~~g 285 (305)
.+.....+...|+++..|.||++.... . ..+. ..+....+...+..++|+|.+++.++..+. -.|+++.+.+|
T Consensus 162 tk~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~pl~R~~~p~dvA~~v~fLa~S~~a~~itG~~i~vdGG 241 (244)
T d1edoa_ 162 SKTAAREGASRNINVNVVCPGFIASDMTAKLGEDMEKKILGTIPLGRTGQPENVAGLVEFLALSPAASYITGQAFTIDGG 241 (244)
T ss_dssp HHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCHHHHHHHHTSCTTCSCBCHHHHHHHHHHHHHCSGGGGCCSCEEEESTT
T ss_pred hHHHHHHHhhhCcEEEEEecceeccHHHHHhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHHCCchhcCCcCCeEEeCCC
Confidence 233344566789999999999964211 1 0000 001111122346789999999999864333 46899999876
|
| >d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), II [TaxId: 4076]
Probab=99.65 E-value=5.5e-16 Score=136.39 Aligned_cols=192 Identities=15% Similarity=0.080 Sum_probs=130.9
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh------hcCCCcEEeecCCCCHHHHHHHh-------c
Q 021928 95 PEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTAL-------R 161 (305)
Q Consensus 95 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~------~~~~~v~~v~~D~~d~~~~~~~~-------~ 161 (305)
+..+|+++||||+++||++++++|+++|++|++.+|++++..+ ..+.++.++.+|++|.+++++++ .
T Consensus 5 ~L~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~~ 84 (259)
T d2ae2a_ 5 NLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFH 84 (259)
T ss_dssp CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTT
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHHhC
Confidence 3456999999999999999999999999999999999876432 22456888999999988776554 2
Q ss_pred -CccEEEECCcch------------------------------HhhhhhhcCCCEEEEEcccccccCCCCcccccchHH-
Q 021928 162 -GVRSIICPSEGF------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA- 209 (305)
Q Consensus 162 -~~d~Vi~~~~g~------------------------------~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~- 209 (305)
.+|++|++++.. .....++.+-.+||++||..+..+.+....|...+.
T Consensus 85 ~~idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asKaa 164 (259)
T d2ae2a_ 85 GKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKGA 164 (259)
T ss_dssp TCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred CCceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhcccccccccccccccccccccchHHHHHH
Confidence 379999874310 111234455679999999988776666666654332
Q ss_pred -HHHHHHHHHHHHhCCCCEEEEecCCcccCC----CCC----cce-eeecCCCCCCccCHHHHHHHHHHHhhCCC--CCC
Q 021928 210 -RKLAEQDESMLMASGIPYTIIRTGVLQNTP----GGK----QGF-QFEEGCAANGSLSKEDAAFICVEALESIP--QTG 277 (305)
Q Consensus 210 -~~~~~~aE~~l~~~gi~~tilRPg~l~~~~----~~~----~~~-~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~ 277 (305)
..+.+.....+...+|++..|.||++.... ... +.. .+....+...+..++|||++++.++.+.. -.|
T Consensus 165 l~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~pl~R~g~pedvA~~v~fL~S~~s~~itG 244 (259)
T d2ae2a_ 165 MDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAAMVAFLCFPAASYVTG 244 (259)
T ss_dssp HHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTSTTCSCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred HHHHHHHHHHHhCcCceEEEEeeeCcccCHHHHhhhhchhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhCCCcC
Confidence 222233333455689999999999964211 000 000 00011222346689999999999996433 478
Q ss_pred cEEEEecCC
Q 021928 278 LIFEVVNGE 286 (305)
Q Consensus 278 ~~~~v~~g~ 286 (305)
+++.|.+|-
T Consensus 245 ~~i~VDGG~ 253 (259)
T d2ae2a_ 245 QIIYVDGGL 253 (259)
T ss_dssp CEEEESTTG
T ss_pred cEEEECCCe
Confidence 999998874
|
| >d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Xylitol dehydrogenase species: Gluconobacter oxydans [TaxId: 442]
Probab=99.64 E-value=5.7e-16 Score=136.34 Aligned_cols=189 Identities=14% Similarity=0.108 Sum_probs=130.0
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh------hcCCCcEEeecCCCCHHHHHHHhc-------Cc
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTALR-------GV 163 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~------~~~~~v~~v~~D~~d~~~~~~~~~-------~~ 163 (305)
.+|+++||||+++||++++++|++.|++|+++.|++++..+ ..+.++..+.+|++|.++++++++ .+
T Consensus 4 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 83 (260)
T d1zema1 4 NGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGKI 83 (260)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 46999999999999999999999999999999999766332 234578899999999888776654 57
Q ss_pred cEEEECCc-----ch--------------------------HhhhhhhcCCCEEEEEcccccccCCCCcccccchHH--H
Q 021928 164 RSIICPSE-----GF--------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA--R 210 (305)
Q Consensus 164 d~Vi~~~~-----g~--------------------------~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~--~ 210 (305)
|++|++++ +. ....+.+.+-.++|++||..+..+.+....|...+. .
T Consensus 84 DilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~~~~~Y~asKaal~ 163 (260)
T d1zema1 84 DFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSKGAII 163 (260)
T ss_dssp CEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCTTBHHHHHHHHHHH
T ss_pred CeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhcCCCCCeeechhhccCCcchHHHHHHHHHHH
Confidence 99998733 10 111234456679999999988877666666655432 2
Q ss_pred HHHHHHHHHHHhCCCCEEEEecCCcccCCC------------CCc-----cee---eecCCCCCCccCHHHHHHHHHHHh
Q 021928 211 KLAEQDESMLMASGIPYTIIRTGVLQNTPG------------GKQ-----GFQ---FEEGCAANGSLSKEDAAFICVEAL 270 (305)
Q Consensus 211 ~~~~~aE~~l~~~gi~~tilRPg~l~~~~~------------~~~-----~~~---~~~~~~~~~~Is~~DvA~~iv~~l 270 (305)
.+.+.....+...++++..|.||++..... ... ... +....+..-+..++|+|.+++.++
T Consensus 164 ~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~pedvA~~v~fL~ 243 (260)
T d1zema1 164 ALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGDINEIPGVVAFLL 243 (260)
T ss_dssp HHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTSTTSSCBCGGGSHHHHHHHH
T ss_pred HHHHHHHHHhhhhCCEEEEeccCcccCcchhhcchhhhhhhcccccccCHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh
Confidence 222333344567899999999999643210 000 000 001112233567899999999999
Q ss_pred hCCC--CCCcEEEEecC
Q 021928 271 ESIP--QTGLIFEVVNG 285 (305)
Q Consensus 271 ~~~~--~~~~~~~v~~g 285 (305)
.+.. -.|+++.|.+|
T Consensus 244 S~~s~~itG~~i~VDGG 260 (260)
T d1zema1 244 GDDSSFMTGVNLPIAGG 260 (260)
T ss_dssp SGGGTTCCSCEEEESCC
T ss_pred CchhcCccCCeEEeCCC
Confidence 6433 46899988765
|
| >d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3beta/17beta hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=99.64 E-value=1.4e-15 Score=133.40 Aligned_cols=189 Identities=13% Similarity=0.081 Sum_probs=127.9
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhh---hhcCCCcEEeecCCCCHHHHHHHhc-------CccEE
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM---ESFGTYVESMAGDASNKKFLKTALR-------GVRSI 166 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~---~~~~~~v~~v~~D~~d~~~~~~~~~-------~~d~V 166 (305)
.+|+++||||+++||++++++|+++|++|++.+|++++.. +.++.+..++.+|++|.++++++++ .+|++
T Consensus 5 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iDil 84 (253)
T d1hxha_ 5 QGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNVL 84 (253)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEeecCCHHHHHHHHHHHHHHhCCCCeE
Confidence 4599999999999999999999999999999999986643 3346678899999999877766553 57999
Q ss_pred EECCcch------------------------------HhhhhhhcCCCEEEEEcccccccCCCCcccccchHH--HHHHH
Q 021928 167 ICPSEGF------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA--RKLAE 214 (305)
Q Consensus 167 i~~~~g~------------------------------~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~--~~~~~ 214 (305)
|++++.. ....+++.+ .+||++||..+..+......|..++. ..+.+
T Consensus 85 VnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-G~Iv~isS~~~~~~~~~~~~Y~asKaal~~lt~ 163 (253)
T d1hxha_ 85 VNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG-GSIINMASVSSWLPIEQYAGYSASKAAVSALTR 163 (253)
T ss_dssp EECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC-EEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHH
T ss_pred EecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcC-CceecccchhhhcCccccccccchhHHHHHHHH
Confidence 9884310 111233334 78999999988877666666655442 12222
Q ss_pred HHHHHHHh--CCCCEEEEecCCcccC------CC-CCcceeee-cCC-CCCCccCHHHHHHHHHHHhhCCC--CCCcEEE
Q 021928 215 QDESMLMA--SGIPYTIIRTGVLQNT------PG-GKQGFQFE-EGC-AANGSLSKEDAAFICVEALESIP--QTGLIFE 281 (305)
Q Consensus 215 ~aE~~l~~--~gi~~tilRPg~l~~~------~~-~~~~~~~~-~~~-~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~ 281 (305)
.....+.. .+|++..|.||++... +. ..+..... ... ....+..++|+|++++.++.+.. -.|+++.
T Consensus 164 ~lA~e~~~~g~~IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~gr~~~pedvA~~v~fL~S~~s~~itG~~i~ 243 (253)
T d1hxha_ 164 AAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGVSKEMVLHDPKLNRAGRAYMPERIAQLVLFLASDESSVMSGSELH 243 (253)
T ss_dssp HHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTTCCHHHHBCBTTTBTTCCEECHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred HHHHHHhhcCCCEEEEEEeECCCcCHhHHhhCcchhhHHHHHhCccccccCCCCCHHHHHHHHHHHhChhhCCCcCcEEE
Confidence 22223333 4699999999985321 11 11111110 111 11235688999999999996433 4789999
Q ss_pred EecCC
Q 021928 282 VVNGE 286 (305)
Q Consensus 282 v~~g~ 286 (305)
|.+|-
T Consensus 244 VDGG~ 248 (253)
T d1hxha_ 244 ADNSI 248 (253)
T ss_dssp ESSSC
T ss_pred ECccH
Confidence 98774
|
| >d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 17-beta-hydroxysteroid dehydrogenase type XI species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.63 E-value=2.5e-15 Score=131.00 Aligned_cols=173 Identities=13% Similarity=0.129 Sum_probs=119.9
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh------hcCCCcEEeecCCCCHHHHHHHhc-------C
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTALR-------G 162 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~------~~~~~v~~v~~D~~d~~~~~~~~~-------~ 162 (305)
..+|+++||||+++||++++++|+++|++|++++|++++..+ ..+.++..+.+|++|.+++..+++ .
T Consensus 5 l~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~ 84 (244)
T d1yb1a_ 5 VTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGD 84 (244)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCC
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCC
Confidence 456999999999999999999999999999999999876332 234578999999999988776553 5
Q ss_pred ccEEEECCcch------------------------------HhhhhhhcCCCEEEEEcccccccCCCCcccccchHHH--
Q 021928 163 VRSIICPSEGF------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR-- 210 (305)
Q Consensus 163 ~d~Vi~~~~g~------------------------------~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~-- 210 (305)
+|.+|++++.. ....+++.+-.+||++||..+..+.+....|..+++.
T Consensus 85 idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~asKaal~ 164 (244)
T d1yb1a_ 85 VSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYCSSKFAAV 164 (244)
T ss_dssp CSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCHHHHHHHHHHHHHHH
T ss_pred CceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecchhcCCCCCcHHHHHHHHHHH
Confidence 79999884410 1122455677899999999988765555555544321
Q ss_pred HHHHHHHHHHHh---CCCCEEEEecCCcccCCCCCcceeeecCCCCCCccCHHHHHHHHHHHhhCCC
Q 021928 211 KLAEQDESMLMA---SGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIP 274 (305)
Q Consensus 211 ~~~~~aE~~l~~---~gi~~tilRPg~l~~~~~~~~~~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~ 274 (305)
.+.+.....+.. .|+.++.|.||++......... ......+.++|+|+.++..+..+.
T Consensus 165 ~~~~~La~El~~~~~~gI~V~~i~PG~v~T~~~~~~~------~~~~~~~~pe~va~~i~~~~~~~~ 225 (244)
T d1yb1a_ 165 GFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKNPS------TSLGPTLEPEEVVNRLMHGILTEQ 225 (244)
T ss_dssp HHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTCTH------HHHCCCCCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHhhcCCCEEEEEEEcCCCCChhhhCcC------ccccCCCCHHHHHHHHHHHHhcCC
Confidence 112222222322 5899999999986443221111 111345689999999999887653
|
| >d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Streptomyces coelicolor [TaxId: 1902]
Probab=99.63 E-value=2.2e-15 Score=132.23 Aligned_cols=189 Identities=11% Similarity=0.090 Sum_probs=129.7
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh------hcCCCcEEeecCCCCHHHHHHHhc-------Ccc
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTALR-------GVR 164 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~------~~~~~v~~v~~D~~d~~~~~~~~~-------~~d 164 (305)
+|.+|||||+++||++++++|+++|++|++..|++++..+ ..+.++.++.+|++|.++++++++ .+|
T Consensus 2 gKValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iD 81 (257)
T d2rhca1 2 SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVD 81 (257)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSCS
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHhCCCC
Confidence 4889999999999999999999999999999999766332 234578999999999988876654 579
Q ss_pred EEEECCcch--------------------------Hhhh------hhhcCCCEEEEEcccccccCCCCcccccchHH--H
Q 021928 165 SIICPSEGF--------------------------ISNA------GSLKGVQHVILLSQLSVYRGSGGIQALMKGNA--R 210 (305)
Q Consensus 165 ~Vi~~~~g~--------------------------~~~~------a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~--~ 210 (305)
++|++++.. +... .++.+-.++|.+||.....+.+....|...+. .
T Consensus 82 ilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~~g~Ii~i~S~~~~~~~~~~~~Y~asKaal~ 161 (257)
T d2rhca1 82 VLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVV 161 (257)
T ss_dssp EEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHTEEEEEEECCGGGTSCCTTCHHHHHHHHHHH
T ss_pred EEEecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcCCcccccccccccccccccchhHHHHHHHHH
Confidence 999874310 1111 23345568999999988877766666655442 2
Q ss_pred HHHHHHHHHHHhCCCCEEEEecCCcccCC------------CCCcce---eeecCCCCCCccCHHHHHHHHHHHhhCCC-
Q 021928 211 KLAEQDESMLMASGIPYTIIRTGVLQNTP------------GGKQGF---QFEEGCAANGSLSKEDAAFICVEALESIP- 274 (305)
Q Consensus 211 ~~~~~aE~~l~~~gi~~tilRPg~l~~~~------------~~~~~~---~~~~~~~~~~~Is~~DvA~~iv~~l~~~~- 274 (305)
.+.+.....+...++++..|.||++.... ...... .+....+..-+..++|+|.+++.++.+..
T Consensus 162 ~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~e~~~~~~~~~PlgR~~~pedia~~v~fL~S~~s~ 241 (257)
T d2rhca1 162 GFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAYLIGPGAA 241 (257)
T ss_dssp HHHHHHHHHTTTSEEEEEEEEECSBCSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSTTSSCBCHHHHHHHHHHHTSGGGT
T ss_pred HHHHHHHHHhhhhCcEEEEEeeCCCCCHHHHHHHhhhhhhcccChHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhc
Confidence 22222333445678999999999863211 000000 00011122346789999999999996433
Q ss_pred -CCCcEEEEecCC
Q 021928 275 -QTGLIFEVVNGE 286 (305)
Q Consensus 275 -~~~~~~~v~~g~ 286 (305)
-.|+++.|.+|-
T Consensus 242 ~itG~~i~vDGG~ 254 (257)
T d2rhca1 242 AVTAQALNVCGGL 254 (257)
T ss_dssp TCCSCEEEESTTC
T ss_pred CCcCceEEECcCc
Confidence 468999998874
|
| >d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Erythromycin synthase, eryAI, 1st ketoreductase module species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=99.63 E-value=8.9e-15 Score=128.02 Aligned_cols=179 Identities=16% Similarity=0.194 Sum_probs=121.2
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcchh---h------hhcCCCcEEeecCCCCHHHHHHHhcC---
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNA---M------ESFGTYVESMAGDASNKKFLKTALRG--- 162 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~---~------~~~~~~v~~v~~D~~d~~~~~~~~~~--- 162 (305)
.+..+||||||+|+||++++++|+++|+ +|+++.|+..+. . +..+.++.++.+|++|.+++.++++.
T Consensus 7 ~p~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~i~~ 86 (259)
T d2fr1a1 7 KPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGD 86 (259)
T ss_dssp CCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCT
T ss_pred CCcCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhccccccccccccchHHHHHHhhccccc
Confidence 3558999999999999999999999998 588888874331 1 12345789999999999998887753
Q ss_pred ---ccEEEECCcc----h----------------------HhhhhhhcCCCEEEEEcccccccCCCCcccccchHHHHHH
Q 021928 163 ---VRSIICPSEG----F----------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLA 213 (305)
Q Consensus 163 ---~d~Vi~~~~g----~----------------------~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~~~~ 213 (305)
+|.|||+++. . +..+....+..+||++||..+..+..+...|...+. ..
T Consensus 87 ~~~i~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~iv~~SS~a~~~g~~~~~~YaAaka--~l 164 (259)
T d2fr1a1 87 DVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELDLTAFVLFSSFASAFGAPGLGGYAPGNA--YL 164 (259)
T ss_dssp TSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSCCSEEEEEEEHHHHTCCTTCTTTHHHHH--HH
T ss_pred cccccccccccccccccccccccHHHHHHHhhhhccchhHHHHHhhccCCceEeeecchhhccCCcccHHHHHHHH--hH
Confidence 5788887431 0 222344566789999999988877666666654332 22
Q ss_pred HHHHHHHHhCCCCEEEEecCCcccCCCCCcceeeecCCCCCCccCHHHHHHHHHHHhhCCCCC
Q 021928 214 EQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQT 276 (305)
Q Consensus 214 ~~aE~~l~~~gi~~tilRPg~l~~~~~~~~~~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~~~ 276 (305)
...-+.++..|++++.|.||.+.+..-......-.........++.+++++++..++..+...
T Consensus 165 ~~la~~~~~~Gi~v~~I~pg~~~~~g~~~~~~~~~~~~~G~~~~~~~~~~~~l~~~l~~~~~~ 227 (259)
T d2fr1a1 165 DGLAQQRRSDGLPATAVAWGTWAGSGMAEGPVADRFRRHGVIEMPPETACRALQNALDRAEVC 227 (259)
T ss_dssp HHHHHHHHHTTCCCEEEEECCBC------------CTTTTEECBCHHHHHHHHHHHHHTTCSS
T ss_pred HHHHHHHHhCCCCEEECCCCcccCCccccchHHHHHHhcCCCCCCHHHHHHHHHHHHhCCCce
Confidence 223345677899999999998643211000000001112235689999999999999876543
|
| >d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR) species: Human (Homo sapiens), [TaxId: 9606]
Probab=99.62 E-value=7.1e-15 Score=131.10 Aligned_cols=192 Identities=11% Similarity=0.127 Sum_probs=128.2
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhh-------hhcCCCcEEeecCCCCHHHHHHHh-------
Q 021928 95 PEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM-------ESFGTYVESMAGDASNKKFLKTAL------- 160 (305)
Q Consensus 95 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~-------~~~~~~v~~v~~D~~d~~~~~~~~------- 160 (305)
+..+|++|||||+++||++++++|+++|++|++++|+.++.. +..+..+.++.+|++|.+++++++
T Consensus 22 ~l~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~ 101 (294)
T d1w6ua_ 22 SFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVA 101 (294)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhhhhhhc
Confidence 345699999999999999999999999999999999976532 223567889999999988876655
Q ss_pred cCccEEEECCcch--------------------------Hh-----hhhhhcCCCEEEEEcccccccCCCCcccccchH-
Q 021928 161 RGVRSIICPSEGF--------------------------IS-----NAGSLKGVQHVILLSQLSVYRGSGGIQALMKGN- 208 (305)
Q Consensus 161 ~~~d~Vi~~~~g~--------------------------~~-----~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~- 208 (305)
.++|++|++++.. +. ..........++.+|+.....+.+....|...+
T Consensus 102 g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~~~~~~~~~~~YsasKa 181 (294)
T d1w6ua_ 102 GHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSASAKA 181 (294)
T ss_dssp CSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCTTCHHHHHHHH
T ss_pred cccchhhhhhhhccccccccchhhhhhhheeeecccchhhhhhhhcccccccccccccccccchhhhcccccchHHHHHH
Confidence 3679999874310 00 011223445677778776666555555554433
Q ss_pred -HHHHHHHHHHHHHhCCCCEEEEecCCcccCCCC----Cccee---eecCCCCCCccCHHHHHHHHHHHhhCCC--CCCc
Q 021928 209 -ARKLAEQDESMLMASGIPYTIIRTGVLQNTPGG----KQGFQ---FEEGCAANGSLSKEDAAFICVEALESIP--QTGL 278 (305)
Q Consensus 209 -~~~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~----~~~~~---~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~ 278 (305)
...+.+.....+...|+++..|.||++...... ..... +....+...+..++|+|.+++.++.+.. -.|+
T Consensus 182 al~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~pl~R~~~pediA~~v~fL~sd~s~~itG~ 261 (294)
T d1w6ua_ 182 GVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPCGRLGTVEELANLAAFLCSDYASWINGA 261 (294)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHHHHHHHTTCTTSSCBCHHHHHHHHHHHTSGGGTTCCSC
T ss_pred HHHHHHHHHHHHHhHhCeEEEEEccCccccchhhhccCCcHHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCchhcCCCCc
Confidence 222233333445678999999999996432210 00000 0011122346789999999999996543 4789
Q ss_pred EEEEecCC
Q 021928 279 IFEVVNGE 286 (305)
Q Consensus 279 ~~~v~~g~ 286 (305)
++.|.+|.
T Consensus 262 ~i~vDGG~ 269 (294)
T d1w6ua_ 262 VIKFDGGE 269 (294)
T ss_dssp EEEESTTH
T ss_pred EEEECCCh
Confidence 99999874
|
| >d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase (5l265) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.62 E-value=5.7e-15 Score=130.07 Aligned_cols=189 Identities=15% Similarity=0.149 Sum_probs=121.9
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh------c---CCCcEEeecCCCCHHHHHHHhc------
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------F---GTYVESMAGDASNKKFLKTALR------ 161 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~---~~~v~~v~~D~~d~~~~~~~~~------ 161 (305)
.+|.++||||+++||++++++|+++|++|+++.|++++..+. . +.++.++.+|++|.++++++++
T Consensus 4 ~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~ 83 (264)
T d1spxa_ 4 AEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKF 83 (264)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHHHh
Confidence 459999999999999999999999999999999997663321 1 1358899999999888776664
Q ss_pred -CccEEEECCcch----------------------------------HhhhhhhcCCCEEEEEccc-ccccCCCCccccc
Q 021928 162 -GVRSIICPSEGF----------------------------------ISNAGSLKGVQHVILLSQL-SVYRGSGGIQALM 205 (305)
Q Consensus 162 -~~d~Vi~~~~g~----------------------------------~~~~a~~~gv~~~V~iSS~-~~~~~~~~~~~~~ 205 (305)
++|++|++++.. .....++.+ .++|.++|. +...+.+....|.
T Consensus 84 g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~-g~iI~~~S~~~~~~~~~~~~~Y~ 162 (264)
T d1spxa_ 84 GKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK-GEIVNISSIASGLHATPDFPYYS 162 (264)
T ss_dssp SCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTTSSSSCCTTSHHHH
T ss_pred CCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCcccccc-CcceeeeeeccccccCCCchhhh
Confidence 679999874310 011122333 456666554 4444554555554
Q ss_pred chHH--HHHHHHHHHHHHhCCCCEEEEecCCcccCCCCCcc----e--ee-------ecCCCCCCccCHHHHHHHHHHHh
Q 021928 206 KGNA--RKLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQG----F--QF-------EEGCAANGSLSKEDAAFICVEAL 270 (305)
Q Consensus 206 ~~~~--~~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~~~----~--~~-------~~~~~~~~~Is~~DvA~~iv~~l 270 (305)
..+. ..+.+.....+...++++..|.||++......... . .. ....+..-+..++|+|++++.++
T Consensus 163 asKaal~~lt~~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~pedvA~~v~fL~ 242 (264)
T d1spxa_ 163 IAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAGVMGQPQDIAEVIAFLA 242 (264)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHHHCTTSSCBCHHHHHHHHHHHH
T ss_pred hhhhhHHHHHHHHHHHhcccCeEEEEEeeCCCCCcchhccCCcHHHHHHHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh
Confidence 4332 22223333445678999999999996433211000 0 00 00011233568899999999999
Q ss_pred hCC--C-CCCcEEEEecCC
Q 021928 271 ESI--P-QTGLIFEVVNGE 286 (305)
Q Consensus 271 ~~~--~-~~~~~~~v~~g~ 286 (305)
.++ . -.|+++.|.+|.
T Consensus 243 S~~~s~~itG~~i~vDGG~ 261 (264)
T d1spxa_ 243 DRKTSSYIIGHQLVVDGGS 261 (264)
T ss_dssp CHHHHTTCCSCEEEESTTG
T ss_pred CCcccCCccCceEEeCCCh
Confidence 643 2 478999998774
|
| >d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Peroxisomal trans 2-enoyl CoA reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.59 E-value=1.9e-14 Score=128.81 Aligned_cols=189 Identities=13% Similarity=0.109 Sum_probs=122.3
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh-----------cCCCcEEeecCCCCHHHHHHHhc----
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-----------FGTYVESMAGDASNKKFLKTALR---- 161 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~-----------~~~~v~~v~~D~~d~~~~~~~~~---- 161 (305)
.+|++|||||+++||++++++|++.|++|++..|+.++..+. .+.++..+.+|++|.++++++++
T Consensus 11 ~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~ 90 (297)
T d1yxma1 11 QGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLD 90 (297)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHHHHH
Confidence 569999999999999999999999999999999997653211 13468899999999988776653
Q ss_pred ---CccEEEECCcch------------------------------HhhhhhhcCCCEEEEEcccccccCCCCcccccchH
Q 021928 162 ---GVRSIICPSEGF------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGN 208 (305)
Q Consensus 162 ---~~d~Vi~~~~g~------------------------------~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~ 208 (305)
.+|++|++++.. ......+.+-.++|.+|+... ...+....|...+
T Consensus 91 ~~G~iDiLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~Ii~~ss~~~-~~~~~~~~Y~asK 169 (297)
T d1yxma1 91 TFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTK-AGFPLAVHSGAAR 169 (297)
T ss_dssp HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCCT-TCCTTCHHHHHHH
T ss_pred HhCCeEEEEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhcccccccccccccccc-ccccccccchhHH
Confidence 679999874310 111223455567888876443 2333333443322
Q ss_pred --HHHHHHHHHHHHHhCCCCEEEEecCCcccCCCC------Cccee--eecCCCCCCccCHHHHHHHHHHHhhCCC--CC
Q 021928 209 --ARKLAEQDESMLMASGIPYTIIRTGVLQNTPGG------KQGFQ--FEEGCAANGSLSKEDAAFICVEALESIP--QT 276 (305)
Q Consensus 209 --~~~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~------~~~~~--~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~ 276 (305)
...+.+.....+...+|++..|.||++...... .+... .....+..-+.+++|||.+++.++.+.. -.
T Consensus 170 aal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~plgR~g~pedvA~~v~fL~Sd~s~~iT 249 (297)
T d1yxma1 170 AGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAKRIGVPEEVSSVVCFLLSPAASFIT 249 (297)
T ss_dssp HHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGGSTTSSCBCTHHHHHHHHHHHSGGGTTCC
T ss_pred HHHHHHHHHHHHHhcccCceEEEeeeCcCcCcchhhhccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCcC
Confidence 122222233344568999999999996432110 00000 0001112335578999999999996433 47
Q ss_pred CcEEEEecCC
Q 021928 277 GLIFEVVNGE 286 (305)
Q Consensus 277 ~~~~~v~~g~ 286 (305)
|+++.|.+|.
T Consensus 250 G~~i~VDGG~ 259 (297)
T d1yxma1 250 GQSVDVDGGR 259 (297)
T ss_dssp SCEEEESTTG
T ss_pred CcEEEeCcCh
Confidence 8999998763
|
| >d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus, TTHB020 [TaxId: 274]
Probab=99.59 E-value=7.4e-15 Score=127.71 Aligned_cols=189 Identities=16% Similarity=0.183 Sum_probs=122.9
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh---hcCCCcEEeecCCCCHHHHHHHhc-------CccEE
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALR-------GVRSI 166 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~---~~~~~v~~v~~D~~d~~~~~~~~~-------~~d~V 166 (305)
.+|+++||||+++||++++++|+++|++|++..|+.++..+ .++.++.++++|+++.++++++++ .+|++
T Consensus 4 ~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~i~~~~~~i~~~~g~iDiL 83 (241)
T d2a4ka1 4 SGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLHGV 83 (241)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEe
Confidence 46999999999999999999999999999999999876433 345678899999999988876554 57999
Q ss_pred EECCcch--------------------------Hhhh-hhh-cCCCEEEEEcccccccCCCCcccccch--HHHHHHHHH
Q 021928 167 ICPSEGF--------------------------ISNA-GSL-KGVQHVILLSQLSVYRGSGGIQALMKG--NARKLAEQD 216 (305)
Q Consensus 167 i~~~~g~--------------------------~~~~-a~~-~gv~~~V~iSS~~~~~~~~~~~~~~~~--~~~~~~~~a 216 (305)
|++++.. +..+ ... .+-+.++.+|+.+.. ..+....|... ....+.+..
T Consensus 84 innAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~~~i~~~ss~a~~-~~~~~~~Y~~sK~al~~lt~~l 162 (241)
T d2a4ka1 84 AHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGL-GAFGLAHYAAGKLGVVGLARTL 162 (241)
T ss_dssp EEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTC-CHHHHHHHHHCSSHHHHHHHHH
T ss_pred ccccccccccchhhhhccccccccccccccccccccccccccccccceeeccccccc-cccCccccchhhHHHHHHHHHH
Confidence 9873310 0111 111 223355555555433 22233333222 233333334
Q ss_pred HHHHHhCCCCEEEEecCCcccCCCCC-cc---eeeecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEEEEecCC
Q 021928 217 ESMLMASGIPYTIIRTGVLQNTPGGK-QG---FQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVNGE 286 (305)
Q Consensus 217 E~~l~~~gi~~tilRPg~l~~~~~~~-~~---~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~v~~g~ 286 (305)
...+...++++..|.||.+....... .. ..+....+...+..++|||++++.++.+.. -.|+++.+.+|.
T Consensus 163 A~el~~~gIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v~fL~S~~s~~itG~~i~vDGG~ 238 (241)
T d2a4ka1 163 ALELARKGVRVNVLLPGLIQTPMTAGLPPWAWEQEVGASPLGRAGRPEEVAQAALFLLSEESAYITGQALYVDGGR 238 (241)
T ss_dssp HHHHTTTTCEEEEEEECSBCCGGGTTSCHHHHHHHHHTSTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred HHHHhHhCCEEeeeccCcCCCHHHHhhhHhHHHHHHhCCCCCCCcCHHHHHHHHHHHhcchhCCCcCceEEeCCCc
Confidence 44566789999999999964321111 00 001111223456689999999999996533 468999998874
|
| >d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein R05D8.7 species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.59 E-value=5.6e-15 Score=130.68 Aligned_cols=190 Identities=12% Similarity=0.077 Sum_probs=123.4
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh------c---CCCcEEeecCCCCHHHHHHHhc------
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------F---GTYVESMAGDASNKKFLKTALR------ 161 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~---~~~v~~v~~D~~d~~~~~~~~~------ 161 (305)
.+|+++||||+++||++++++|+++|++|++.+|++++..+. . ..++..+.+|++|.++++++++
T Consensus 4 ~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~ 83 (272)
T d1xkqa_ 4 SNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQF 83 (272)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHHHh
Confidence 569999999999999999999999999999999998663321 1 1357899999999888776654
Q ss_pred -CccEEEECCcch----------------------------------HhhhhhhcCCCEEEEEcccccccCCCCcccccc
Q 021928 162 -GVRSIICPSEGF----------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMK 206 (305)
Q Consensus 162 -~~d~Vi~~~~g~----------------------------------~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~ 206 (305)
.+|++|++++.. .....++.+-..|+++|+.+...+.+....|..
T Consensus 84 g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~Ss~a~~~~~~~~~~Y~a 163 (272)
T d1xkqa_ 84 GKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQAQPDFLYYAI 163 (272)
T ss_dssp SCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSSCCCSSHHHHH
T ss_pred CCceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhcccccccCCccccccchhccccCCCCcchhhh
Confidence 679999873310 001122333334444455555555555555654
Q ss_pred hHH--HHHHHHHHHHHHhCCCCEEEEecCCcccCC----CCCcce---------eeecCCCCCCccCHHHHHHHHHHHhh
Q 021928 207 GNA--RKLAEQDESMLMASGIPYTIIRTGVLQNTP----GGKQGF---------QFEEGCAANGSLSKEDAAFICVEALE 271 (305)
Q Consensus 207 ~~~--~~~~~~aE~~l~~~gi~~tilRPg~l~~~~----~~~~~~---------~~~~~~~~~~~Is~~DvA~~iv~~l~ 271 (305)
.+. ..+.+.....+...++++..|.||++.... ...... ......+..-+..++|||++++.++.
T Consensus 164 sKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~pediA~~v~fL~S 243 (272)
T d1xkqa_ 164 AKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIGAAGKPEHIANIILFLAD 243 (272)
T ss_dssp HHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcchhhhccCCchHHHHHHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHhC
Confidence 332 222233334566789999999999864221 100000 00011122345689999999999985
Q ss_pred CC--C-CCCcEEEEecCC
Q 021928 272 SI--P-QTGLIFEVVNGE 286 (305)
Q Consensus 272 ~~--~-~~~~~~~v~~g~ 286 (305)
++ . -.|+++.|.+|-
T Consensus 244 ~~as~~iTG~~i~vDGG~ 261 (272)
T d1xkqa_ 244 RNLSFYILGQSIVADGGT 261 (272)
T ss_dssp HHHHTTCCSCEEEESTTG
T ss_pred cchhCCccCeEEEeCcCH
Confidence 33 2 478999999875
|
| >d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Thermus thermophilus [TaxId: 274]
Probab=99.58 E-value=2.4e-14 Score=125.19 Aligned_cols=192 Identities=11% Similarity=0.070 Sum_probs=124.6
Q ss_pred cCCCCEEEEEcCCC--hHHHHHHHHHHhCCCeEEEEEcCcchhhh-----hcCCCcEEeecCCCCHHHHHHHhc------
Q 021928 95 PEARDAVLVTDGDS--DIGQMVILSLIVKRTRIKALVKDKRNAME-----SFGTYVESMAGDASNKKFLKTALR------ 161 (305)
Q Consensus 95 ~~~~~~vlVtGatG--~iG~~l~~~L~~~g~~V~~~~R~~~~~~~-----~~~~~v~~v~~D~~d~~~~~~~~~------ 161 (305)
+..+|+++||||+| +||++++++|+++|++|++..|+++...+ .......++.+|++|.++++++++
T Consensus 5 ~L~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 84 (256)
T d1ulua_ 5 DLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAF 84 (256)
T ss_dssp CCTTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHhhhccCcccccccccCCHHHHHHHHHHHHHhc
Confidence 34569999999998 89999999999999999988887643211 123457889999999888776654
Q ss_pred -CccEEEECCcc---h-----Hh-------------------hhhhh-----cCCCEEEEEcccccccCCCCcccccchH
Q 021928 162 -GVRSIICPSEG---F-----IS-------------------NAGSL-----KGVQHVILLSQLSVYRGSGGIQALMKGN 208 (305)
Q Consensus 162 -~~d~Vi~~~~g---~-----~~-------------------~~a~~-----~gv~~~V~iSS~~~~~~~~~~~~~~~~~ 208 (305)
++|++|++++. . .. ..++. .+-.++|++||..+..+.+....|..++
T Consensus 85 g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~Iv~isS~~~~~~~~~~~~Y~asK 164 (256)
T d1ulua_ 85 GGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKVVPKYNVMAIAK 164 (256)
T ss_dssp SSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSBCTTCHHHHHHH
T ss_pred CCceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhccCCEEEEEeehHhcCCCCCchHHHHHH
Confidence 57999987431 0 00 00111 1125799999998877666655565433
Q ss_pred H--HHHHHHHHHHHHhCCCCEEEEecCCcccCCCCCc----ce--eeecCCCCCCccCHHHHHHHHHHHhhCCC--CCCc
Q 021928 209 A--RKLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQ----GF--QFEEGCAANGSLSKEDAAFICVEALESIP--QTGL 278 (305)
Q Consensus 209 ~--~~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~~----~~--~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~ 278 (305)
. ..+.+.....+...|+++..|.||.+........ .. .+....+...+..++|||.+++.++.+.. -.|+
T Consensus 165 aal~~ltr~lA~ela~~gIrVN~I~PG~i~t~~~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~s~~itG~ 244 (256)
T d1ulua_ 165 AALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPLRRNITQEEVGNLGLFLLSPLASGITGE 244 (256)
T ss_dssp HHHHHHHHHHHHHHGGGTCEEEEEEECCC----------CHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGGTTCCSC
T ss_pred HHHHHHHHHHHHHhcccCCEEeeeccceeeeccccchhhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhCCccCC
Confidence 2 2222333344567899999999998643321110 00 00011122346789999999999996543 4789
Q ss_pred EEEEecCC
Q 021928 279 IFEVVNGE 286 (305)
Q Consensus 279 ~~~v~~g~ 286 (305)
++.|.+|-
T Consensus 245 ~i~VDGG~ 252 (256)
T d1ulua_ 245 VVYVDAGY 252 (256)
T ss_dssp EEEESTTG
T ss_pred eEEECcCE
Confidence 99998774
|
| >d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein F25D1.5 species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.58 E-value=1.3e-14 Score=128.36 Aligned_cols=190 Identities=12% Similarity=0.096 Sum_probs=127.5
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh------c---CCCcEEeecCCCCHHHHHHHhc------
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------F---GTYVESMAGDASNKKFLKTALR------ 161 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~---~~~v~~v~~D~~d~~~~~~~~~------ 161 (305)
.+|+++||||+++||++++++|++.|++|++..|++++..+. . ..++..+.+|++|.++++++++
T Consensus 3 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 82 (274)
T d1xhla_ 3 SGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKF 82 (274)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHHHc
Confidence 459999999999999999999999999999999997663321 1 1357899999999888776654
Q ss_pred -CccEEEECCcch--------------------------------HhhhhhhcCCCEEEEEcccccccCCCCcccccchH
Q 021928 162 -GVRSIICPSEGF--------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGN 208 (305)
Q Consensus 162 -~~d~Vi~~~~g~--------------------------------~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~ 208 (305)
.+|++|++++.. ....+++.+-.+++++||.....+......|...+
T Consensus 83 G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~ii~~ss~~~~~~~~~~~~Y~asK 162 (274)
T d1xhla_ 83 GKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAHSGYPYYACAK 162 (274)
T ss_dssp SCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSSCCTTSHHHHHHH
T ss_pred CCceEEEeecccccccccccccCCHHHHHHHHhhcccccccccccccccccccccccccchhhhhccccCCCCceehhhh
Confidence 579999873310 01113345556788888877666555555565433
Q ss_pred H--HHHHHHHHHHHHhCCCCEEEEecCCcccCC----CCCcc-------ee--eecCCCCCCccCHHHHHHHHHHHhhCC
Q 021928 209 A--RKLAEQDESMLMASGIPYTIIRTGVLQNTP----GGKQG-------FQ--FEEGCAANGSLSKEDAAFICVEALESI 273 (305)
Q Consensus 209 ~--~~~~~~aE~~l~~~gi~~tilRPg~l~~~~----~~~~~-------~~--~~~~~~~~~~Is~~DvA~~iv~~l~~~ 273 (305)
. ..+.+.....+...||++..|.||++.... ..... .. .....+..-+..++|||.+++.++..+
T Consensus 163 aal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~iPlgR~g~pediA~~v~fL~S~d 242 (274)
T d1xhla_ 163 AALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGKPEEIANIIVFLADRN 242 (274)
T ss_dssp HHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHHHHHHHHHHHHCHH
T ss_pred hHHHHHHHHHHHHHhHhCCceeeeccCCCcCchhhhhcccchhhHHHHHHHHHHHcCCCCCCCcCHHHHHHHHHHHcCCc
Confidence 2 222333334456789999999999964321 10000 00 001112233568999999999998532
Q ss_pred --C-CCCcEEEEecCC
Q 021928 274 --P-QTGLIFEVVNGE 286 (305)
Q Consensus 274 --~-~~~~~~~v~~g~ 286 (305)
. -.|+++.|.+|.
T Consensus 243 ~s~~itG~~i~vDGG~ 258 (274)
T d1xhla_ 243 LSSYIIGQSIVADGGS 258 (274)
T ss_dssp HHTTCCSCEEEESTTG
T ss_pred cccCccCcEEEeCcCH
Confidence 2 478999999885
|
| >d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Drosophila alcohol dehydrogenase species: Fly (Drosophila lebanonensis) [TaxId: 7225]
Probab=99.58 E-value=1.6e-14 Score=126.58 Aligned_cols=191 Identities=12% Similarity=0.078 Sum_probs=127.1
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh------hcC-CCcEEeecCCC-CHHHHHHHh------
Q 021928 95 PEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFG-TYVESMAGDAS-NKKFLKTAL------ 160 (305)
Q Consensus 95 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~------~~~-~~v~~v~~D~~-d~~~~~~~~------ 160 (305)
+..+|+|+||||+++||++++++|+++|++|+++.|+.++..+ ..+ .++.++.+|++ +.+++++++
T Consensus 2 ~l~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 81 (254)
T d1sbya1 2 DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQ 81 (254)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHHH
Confidence 3457999999999999999999999999999999887655221 122 36889999997 554554433
Q ss_pred -cCccEEEECCcch----------------------Hhhhhhh---cCCCEEEEEcccccccCCCCcccccchHH--HHH
Q 021928 161 -RGVRSIICPSEGF----------------------ISNAGSL---KGVQHVILLSQLSVYRGSGGIQALMKGNA--RKL 212 (305)
Q Consensus 161 -~~~d~Vi~~~~g~----------------------~~~~a~~---~gv~~~V~iSS~~~~~~~~~~~~~~~~~~--~~~ 212 (305)
..+|++|++++.. ....+.+ ....+||++||..++.+......|...+. ..+
T Consensus 82 ~g~iDilvnnAG~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~~~~~~~~~Y~asKaal~~~ 161 (254)
T d1sbya1 82 LKTVDILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPVYSASKAAVVSF 161 (254)
T ss_dssp HSCCCEEEECCCCCCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTSHHHHHHHHHHHHH
T ss_pred cCCCCEEEeCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhccCCCCCHHHHHHHHHHHHH
Confidence 4689999885521 1111222 23468999999998877766666665442 222
Q ss_pred HHHHHHHHHhCCCCEEEEecCCcccC----CCCCcce--eeecCCCCCCccCHHHHHHHHHHHhhCCCCCCcEEEEecCC
Q 021928 213 AEQDESMLMASGIPYTIIRTGVLQNT----PGGKQGF--QFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVVNGE 286 (305)
Q Consensus 213 ~~~aE~~l~~~gi~~tilRPg~l~~~----~~~~~~~--~~~~~~~~~~~Is~~DvA~~iv~~l~~~~~~~~~~~v~~g~ 286 (305)
.+.....+...++.+..|.||++..+ ....... .+..........+.+++|++++.+++.. ..|+++.+.+|.
T Consensus 162 t~~la~el~~~gIrVn~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~va~~~~~~~~~~-~tG~vi~vdgG~ 240 (254)
T d1sbya1 162 TNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLLSHPTQTSEQCGQNFVKAIEAN-KNGAIWKLDLGT 240 (254)
T ss_dssp HHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHHHTTSCCEEHHHHHHHHHHHHHHC-CTTCEEEEETTE
T ss_pred HHHHHhhccccCeEEEEEEeCCCcCccccccccchhHHHHHHhccccCCCCCHHHHHHHHHHhhhCC-CCCCEEEECCCE
Confidence 23334456678999999999995422 1110000 0000011123457899999999988755 478999998875
|
| >d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative dehydrogenase ARPG836 (MGC4172) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.58 E-value=2.5e-14 Score=125.41 Aligned_cols=179 Identities=18% Similarity=0.113 Sum_probs=114.6
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh--------cCCCcEEeecCCCCHHHHHHHh-------
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES--------FGTYVESMAGDASNKKFLKTAL------- 160 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~--------~~~~v~~v~~D~~d~~~~~~~~------- 160 (305)
.++|++|||||+++||+++++.|+++|++|++..|++++..+. .+.++.++++|++|.+++++++
T Consensus 8 lk~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~~~~ 87 (257)
T d1xg5a_ 8 WRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQH 87 (257)
T ss_dssp GTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHHHhc
Confidence 3569999999999999999999999999999999998763321 1236788999999988877655
Q ss_pred cCccEEEECCcch------------------------------Hhhhhhhc--CCCEEEEEcccccccCC--CCcccccc
Q 021928 161 RGVRSIICPSEGF------------------------------ISNAGSLK--GVQHVILLSQLSVYRGS--GGIQALMK 206 (305)
Q Consensus 161 ~~~d~Vi~~~~g~------------------------------~~~~a~~~--gv~~~V~iSS~~~~~~~--~~~~~~~~ 206 (305)
.++|++|++++.. .....++. +-.++|++||....... .....|..
T Consensus 88 g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~p~~~~~~Y~~ 167 (257)
T d1xg5a_ 88 SGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYSA 167 (257)
T ss_dssp CCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCSCGGGHHHHH
T ss_pred CCCCEEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHhcCCCCCcccHHHHH
Confidence 3679999884310 01112222 24699999998876432 22223433
Q ss_pred hHH--HHHHHHHHHHH--HhCCCCEEEEecCCcccCCC----CCcceeeecCCCCCCccCHHHHHHHHHHHhhCCC
Q 021928 207 GNA--RKLAEQDESML--MASGIPYTIIRTGVLQNTPG----GKQGFQFEEGCAANGSLSKEDAAFICVEALESIP 274 (305)
Q Consensus 207 ~~~--~~~~~~aE~~l--~~~gi~~tilRPg~l~~~~~----~~~~~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~ 274 (305)
.+. ..+.+.....| ...++.+..|.||.+..... ...............+.+++|||++++.++.++.
T Consensus 168 sKaal~~ltr~la~el~~~~~~I~vn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~fL~s~~a 243 (257)
T d1xg5a_ 168 TKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDKDPEKAAATYEQMKCLKPEDVAEAVIYVLSTPA 243 (257)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTTCHHHHHHHHC---CBCHHHHHHHHHHHHHSCT
T ss_pred HHHHHHhCHHHHHHHHHhCCCCEEEEEEeCCCCCChhhhhcChhhHHHHHhcCCCCCCcCHHHHHHHHHHHhCChh
Confidence 221 11222222223 35789999999998653221 1110001011122456899999999999998765
|
| >d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase species: Pseudomonas sp., lb400 [TaxId: 306]
Probab=99.58 E-value=1.6e-14 Score=127.99 Aligned_cols=188 Identities=17% Similarity=0.161 Sum_probs=124.1
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh---hcCCCcEEeecCCCCHHHHHHHhc-------CccEE
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALR-------GVRSI 166 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~---~~~~~v~~v~~D~~d~~~~~~~~~-------~~d~V 166 (305)
.+|+++||||+++||++++++|+++|++|+++.|++++..+ ..+.++..+.+|+++.++++++++ .+|++
T Consensus 4 ~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~idil 83 (276)
T d1bdba_ 4 KGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDHGDNVLGIVGDVRSLEDQKQAASRCVARFGKIDTL 83 (276)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeeEEecccccHHHHHHHHHHHHHHhCCcccc
Confidence 56999999999999999999999999999999999876433 345678999999999888776653 67999
Q ss_pred EECCcc-----h------------------------------HhhhhhhcCCCEEEEEcccccccCCCCcccccchHH--
Q 021928 167 ICPSEG-----F------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA-- 209 (305)
Q Consensus 167 i~~~~g-----~------------------------------~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~-- 209 (305)
|++++. . ....+++.+ .++|++||..+..+......|..++.
T Consensus 84 vnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~-g~iI~i~S~~~~~~~~~~~~Y~asKaal 162 (276)
T d1bdba_ 84 IPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASR-GNVIFTISNAGFYPNGGGPLYTAAKHAI 162 (276)
T ss_dssp ECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTSTTSSCHHHHHHHHHH
T ss_pred cccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhcC-CCceeeeechhccCCCCCchHHHHHHHH
Confidence 977330 0 011123334 58899988877766655555654432
Q ss_pred HHHHHHHHHHHHhCCCCEEEEecCCcccCCCC-------Cccee-------eecCCCCCCccCHHHHHHHHHHHhhC---
Q 021928 210 RKLAEQDESMLMASGIPYTIIRTGVLQNTPGG-------KQGFQ-------FEEGCAANGSLSKEDAAFICVEALES--- 272 (305)
Q Consensus 210 ~~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~-------~~~~~-------~~~~~~~~~~Is~~DvA~~iv~~l~~--- 272 (305)
..+.+.....+. ..+++..|.||++..+... .+... +....+..-+..++|+|.+++.++..
T Consensus 163 ~~ltr~lA~ela-~~IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~peeva~~v~fL~S~~~a 241 (276)
T d1bdba_ 163 VGLVRELAFELA-PYVRVNGVGSGGINSDLRGPSSLGMGSKAISTVPLADMLKSVLPIGRMPEVEEYTGAYVFFATRGDA 241 (276)
T ss_dssp HHHHHHHHHHHT-TTCEEEEEEECCCCSCCCCCGGGC---------CHHHHHTTTCTTSSCCCGGGGSHHHHHHHCHHHH
T ss_pred HHHHHHHHHHhh-cceEEcccCCCCEecCcCCccchhhhhhccCcHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCCccc
Confidence 112222222233 3599999999996432210 00000 00111112345789999999998842
Q ss_pred CCCCCcEEEEecCC
Q 021928 273 IPQTGLIFEVVNGE 286 (305)
Q Consensus 273 ~~~~~~~~~v~~g~ 286 (305)
.--.|+++.|.+|-
T Consensus 242 ~~itG~~i~VDGG~ 255 (276)
T d1bdba_ 242 APATGALLNYDGGL 255 (276)
T ss_dssp TTCSSCEEEESSSG
T ss_pred CCeeCcEEEECcCh
Confidence 22478999998773
|
| >d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Mannitol dehydrogenase species: Mushroom (Agaricus bisporus) [TaxId: 5341]
Probab=99.57 E-value=8.8e-15 Score=128.53 Aligned_cols=192 Identities=13% Similarity=0.158 Sum_probs=124.8
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhh-------hhcCCCcEEeecCCCCHHHHHHHhc------
Q 021928 95 PEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM-------ESFGTYVESMAGDASNKKFLKTALR------ 161 (305)
Q Consensus 95 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~-------~~~~~~v~~v~~D~~d~~~~~~~~~------ 161 (305)
+.++|++|||||+++||++++++|+++|++|+++.|+.++.. +..+.++.++.+|++|.++++++++
T Consensus 6 ~l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 85 (260)
T d1h5qa_ 6 SFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADL 85 (260)
T ss_dssp CCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred cCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHh
Confidence 345799999999999999999999999999999999986632 2245678999999999988876664
Q ss_pred -CccEEEECCcch------------------------------Hhhh-hhhcCCCEEEEEcccccccCC-------CCcc
Q 021928 162 -GVRSIICPSEGF------------------------------ISNA-GSLKGVQHVILLSQLSVYRGS-------GGIQ 202 (305)
Q Consensus 162 -~~d~Vi~~~~g~------------------------------~~~~-a~~~gv~~~V~iSS~~~~~~~-------~~~~ 202 (305)
.+|++|++++.. .... .++.+-..++.+|+....... ....
T Consensus 86 g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~~~~~~~~~~~~~~~~~ 165 (260)
T d1h5qa_ 86 GPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQV 165 (260)
T ss_dssp CSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEETTEECSCH
T ss_pred CCCcEecccccccccCCHHHhccccccccccccccchhhhhhhhcccccccccceEEEEeeccccccccccccccCcccc
Confidence 579999874310 1111 233445566666666544321 1222
Q ss_pred cccchH--HHHHHHHHHHHHHhCCCCEEEEecCCcccCCC-C-Ccce--eeecCCCCCCccCHHHHHHHHHHHhhCCC--
Q 021928 203 ALMKGN--ARKLAEQDESMLMASGIPYTIIRTGVLQNTPG-G-KQGF--QFEEGCAANGSLSKEDAAFICVEALESIP-- 274 (305)
Q Consensus 203 ~~~~~~--~~~~~~~aE~~l~~~gi~~tilRPg~l~~~~~-~-~~~~--~~~~~~~~~~~Is~~DvA~~iv~~l~~~~-- 274 (305)
.|...+ ...+.+.....+...++++..|.||++..... . .+.. .+....+...+..++|||.+++.++.+..
T Consensus 166 ~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~pl~R~g~pedvA~~v~fL~S~~s~~ 245 (260)
T d1h5qa_ 166 FYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMDKKIRDHQASNIPLNRFAQPEEMTGQAILLLSDHATY 245 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSCHHHHHHHHHTCTTSSCBCGGGGHHHHHHHHSGGGTT
T ss_pred chhhhhhhHHHHHHHHHHHhchhCeEEeecCCCcccCcchhccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhcchhCC
Confidence 333322 12222333344567899999999999642211 1 0100 01111122345688999999999996443
Q ss_pred CCCcEEEEecCC
Q 021928 275 QTGLIFEVVNGE 286 (305)
Q Consensus 275 ~~~~~~~v~~g~ 286 (305)
-.|+++.|.+|.
T Consensus 246 itG~~i~VDGG~ 257 (260)
T d1h5qa_ 246 MTGGEYFIDGGQ 257 (260)
T ss_dssp CCSCEEEECTTG
T ss_pred CcCceEEECCCe
Confidence 468999999875
|
| >d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dehydrogenase/reductase SDR family member 6, DHRS6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.54 E-value=3.7e-14 Score=123.46 Aligned_cols=190 Identities=14% Similarity=0.133 Sum_probs=126.5
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcC-CCcEEeecCCCCHHHHHHHh---cCccEEEECCcc
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG-TYVESMAGDASNKKFLKTAL---RGVRSIICPSEG 172 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~-~~v~~v~~D~~d~~~~~~~~---~~~d~Vi~~~~g 172 (305)
.+|++|||||+++||++++++|+++|++|++++|++++..+... ..++....|+.+.+.++... .++|.+|++++.
T Consensus 5 ~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~id~lVn~ag~ 84 (245)
T d2ag5a1 5 DGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQTRVLDVTKKKQIDQFANEVERLDVLFNVAGF 84 (245)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGGSTTEEEEECCTTCHHHHHHHHHHCSCCSEEEECCCC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhccCCceeeeeccccccccccccccccceeEEecccc
Confidence 46999999999999999999999999999999999877554332 36888999998876655544 578999988431
Q ss_pred h------------------------------HhhhhhhcCCCEEEEEcccccc-cCCCCcccccchHH--HHHHHHHHHH
Q 021928 173 F------------------------------ISNAGSLKGVQHVILLSQLSVY-RGSGGIQALMKGNA--RKLAEQDESM 219 (305)
Q Consensus 173 ~------------------------------~~~~a~~~gv~~~V~iSS~~~~-~~~~~~~~~~~~~~--~~~~~~aE~~ 219 (305)
. ......+.+-.++|++||.... .+......|...++ ..+.+..-..
T Consensus 85 ~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~~~~~~Y~~sKaal~~l~r~lA~e 164 (245)
T d2ag5a1 85 VHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLTKSVAAD 164 (245)
T ss_dssp CCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCTTBHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCCCceeeeeechhhccCCccchhHHHHHHHHHHHHHHHHHHH
Confidence 0 1112344566789999887553 33344444444332 2222333344
Q ss_pred HHhCCCCEEEEecCCcccCCC-------CC-cce--eeecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEEEEecCC
Q 021928 220 LMASGIPYTIIRTGVLQNTPG-------GK-QGF--QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVNGE 286 (305)
Q Consensus 220 l~~~gi~~tilRPg~l~~~~~-------~~-~~~--~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~v~~g~ 286 (305)
+...|+++..|.||.+..... .. +.. .+....+...+..++|+|+++..++.+.. -.|+++.|.+|.
T Consensus 165 ~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~pedva~~v~fL~s~~s~~iTG~~i~VDGG~ 243 (245)
T d2ag5a1 165 FIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTGRFATAEEIAMLCVYLASDESAYVTGNPVIIDGGW 243 (245)
T ss_dssp HGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCTTSSCEEHHHHHHHHHHHHSGGGTTCCSCEEEECTTG
T ss_pred hhhhCcEEEEEeeceeechhhHhhhhhhhhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhChhhCCCcCceEEeCCCc
Confidence 567899999999998642110 00 000 00011222346788999999999996543 478999998774
|
| >d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,6,8-tetrahydroxynaphthalene reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=99.54 E-value=3.2e-14 Score=124.79 Aligned_cols=188 Identities=13% Similarity=0.108 Sum_probs=120.8
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchh-h------hhcCCCcEEeecCCCCHHHHHHHhc-------C
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-M------ESFGTYVESMAGDASNKKFLKTALR-------G 162 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~-~------~~~~~~v~~v~~D~~d~~~~~~~~~-------~ 162 (305)
.+|+||||||+++||++++++|+++|++|++..|+.++. . ...+.++..+.+|++|.++++++++ +
T Consensus 5 ~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 84 (259)
T d1ja9a_ 5 AGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFGG 84 (259)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHHcCC
Confidence 469999999999999999999999999999877665442 1 1235578899999999888877664 5
Q ss_pred ccEEEECCcch------------------------------HhhhhhhcCCCEEEEEccccc-ccCCCCcccccchH--H
Q 021928 163 VRSIICPSEGF------------------------------ISNAGSLKGVQHVILLSQLSV-YRGSGGIQALMKGN--A 209 (305)
Q Consensus 163 ~d~Vi~~~~g~------------------------------~~~~a~~~gv~~~V~iSS~~~-~~~~~~~~~~~~~~--~ 209 (305)
+|++|++++.. ....+++. .+++.++|... ..+.+....|...+ .
T Consensus 85 idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~--g~~iii~s~~~~~~~~~~~~~Y~asK~al 162 (259)
T d1ja9a_ 85 LDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRG--GRIILTSSIAAVMTGIPNHALYAGSKAAV 162 (259)
T ss_dssp EEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEE--EEEEEECCGGGTCCSCCSCHHHHHHHHHH
T ss_pred CcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcC--CcccccccccccccCCCCchhHHHHHHHH
Confidence 79999874310 01112233 35666655433 33333444443332 1
Q ss_pred HHHHHHHHHHHHhCCCCEEEEecCCcccCC---------C-CCccee-------eecCCCCCCccCHHHHHHHHHHHhhC
Q 021928 210 RKLAEQDESMLMASGIPYTIIRTGVLQNTP---------G-GKQGFQ-------FEEGCAANGSLSKEDAAFICVEALES 272 (305)
Q Consensus 210 ~~~~~~aE~~l~~~gi~~tilRPg~l~~~~---------~-~~~~~~-------~~~~~~~~~~Is~~DvA~~iv~~l~~ 272 (305)
..+.+.....+...++++..|.||++.... . ...... +....+...+..++|||++++.++.+
T Consensus 163 ~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~g~p~eVa~~v~fL~S~ 242 (259)
T d1ja9a_ 163 EGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIGYPADIGRAVSALCQE 242 (259)
T ss_dssp HHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHSG
T ss_pred HHHHHHHHHHHhhcCeEEeccCcCCccChhhhhhhhhhhhhhcccCCHHHHHHHHHhCCCCCCCcCHHHHHHHHHHHhCc
Confidence 222233334456689999999999963210 0 000000 00112223467899999999999976
Q ss_pred CC--CCCcEEEEecCC
Q 021928 273 IP--QTGLIFEVVNGE 286 (305)
Q Consensus 273 ~~--~~~~~~~v~~g~ 286 (305)
.. -.|+++.|.+|.
T Consensus 243 ~a~~itG~~i~vDGG~ 258 (259)
T d1ja9a_ 243 ESEWINGQVIKLTGGG 258 (259)
T ss_dssp GGTTCCSCEEEESTTC
T ss_pred hhcCCcCceEEeCCCC
Confidence 54 478999998875
|
| >d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Halohydrin dehalogenase HheC species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.54 E-value=1.9e-14 Score=125.80 Aligned_cols=187 Identities=12% Similarity=0.020 Sum_probs=122.5
Q ss_pred EEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHH-------HHHhcCccEEEECCc-
Q 021928 100 AVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFL-------KTALRGVRSIICPSE- 171 (305)
Q Consensus 100 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~-------~~~~~~~d~Vi~~~~- 171 (305)
+++||||+++||++++++|+++|++|++..|+.++..+.......++.+|+.|.+++ .+.+..+|++|++++
T Consensus 2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~~~~~~G~iDiLVnNAg~ 81 (252)
T d1zmta1 2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAETYPQLKPMSEQEPAELIEAVTSAYGQVDVLVSNDIF 81 (252)
T ss_dssp EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHCTTSEECCCCSHHHHHHHHHHHHSCCCEEEEECCC
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhhhCcEEEeccCCHHHHHHHHHHHHHHcCCCCEEEECCcC
Confidence 789999999999999999999999999999987664433222223445677664333 334457899997632
Q ss_pred ----ch--------------------------HhhhhhhcCCCEEEEEcccccccCCCCcccccchHH--HHHHHHHHHH
Q 021928 172 ----GF--------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA--RKLAEQDESM 219 (305)
Q Consensus 172 ----g~--------------------------~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~--~~~~~~aE~~ 219 (305)
+. ....+++.+-.+||++||.....+......|...+. ..+.+.....
T Consensus 82 ~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~isS~~~~~~~~~~~~Y~asKaal~~lt~~lA~e 161 (252)
T d1zmta1 82 APEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPWKELSTYTSARAGACTLANALSKE 161 (252)
T ss_dssp CCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCCTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccceeecccccccccccccccccccccccHHHHHHHHHHH
Confidence 10 111234456679999999988777666666655432 2222333344
Q ss_pred HHhCCCCEEEEecCCcccCCCCC-cc--------ee---eecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEEEEecC
Q 021928 220 LMASGIPYTIIRTGVLQNTPGGK-QG--------FQ---FEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVNG 285 (305)
Q Consensus 220 l~~~gi~~tilRPg~l~~~~~~~-~~--------~~---~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~v~~g 285 (305)
+...++++..|.||++....... .. .. +....+..-+..++|||.+++.++.+.. -.|+++.|.+|
T Consensus 162 la~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~e~~~~~~~~~pl~R~g~pedvA~~v~fL~S~~s~~iTG~~i~vdGG 241 (252)
T d1zmta1 162 LGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQRLGTQKELGELVAFLASGSCDYLTGQVFWLAGG 241 (252)
T ss_dssp HGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHHSSSSSCBCHHHHHHHHHHHHTTSCGGGTTCEEEESTT
T ss_pred hcccCcEEEEEecCCCcCcchhhhhhcccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCCcCCeEEECCC
Confidence 66789999999999964322110 00 00 0001112335689999999999997554 36899999987
Q ss_pred C
Q 021928 286 E 286 (305)
Q Consensus 286 ~ 286 (305)
-
T Consensus 242 ~ 242 (252)
T d1zmta1 242 F 242 (252)
T ss_dssp C
T ss_pred c
Confidence 5
|
| >d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: ADP-L-glycero-D-mannoheptose 6-epimerase species: Escherichia coli [TaxId: 562]
Probab=99.54 E-value=3.3e-14 Score=125.40 Aligned_cols=193 Identities=14% Similarity=0.038 Sum_probs=109.4
Q ss_pred EEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcc--hhhhhcCCCcEEeecCCCCHHHH-H-----HHhcCccEEEECCc
Q 021928 101 VLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKR--NAMESFGTYVESMAGDASNKKFL-K-----TALRGVRSIICPSE 171 (305)
Q Consensus 101 vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~--~~~~~~~~~v~~v~~D~~d~~~~-~-----~~~~~~d~Vi~~~~ 171 (305)
||||||+||||++|+++|+++|+ +|+++.+-.. +...... ....|..+.+.+ . ..+..+++|+|.++
T Consensus 2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~aa 77 (307)
T d1eq2a_ 2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVD----LNIADYMDKEDFLIQIMAGEEFGDVEAIFHEGA 77 (307)
T ss_dssp EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGHHHHT----SCCSEEEEHHHHHHHHHTTCCCSSCCEEEECCS
T ss_pred EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCCcchhhcccc----cchhhhccchHHHHHHhhhhcccchhhhhhhcc
Confidence 89999999999999999999996 6877753221 1111111 112222222222 2 23356788888732
Q ss_pred c--------------------hHhhhhhhcCCCEEEEEcccccccC-CCCc-------ccccchHHHHHHHHHHHHH---
Q 021928 172 G--------------------FISNAGSLKGVQHVILLSQLSVYRG-SGGI-------QALMKGNARKLAEQDESML--- 220 (305)
Q Consensus 172 g--------------------~~~~~a~~~gv~~~V~iSS~~~~~~-~~~~-------~~~~~~~~~~~~~~aE~~l--- 220 (305)
. .+.+++...+++. |+.||..++.. .... .+...| ...|..+|.++
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~-v~~ss~~~~~~~~~~~~~~~~~~~~~~~Y--~~~K~~~e~~~~~~ 154 (307)
T d1eq2a_ 78 CSSTTEWDGKYMMDNNYQYSKELLHYCLEREIPF-LYASSAATYGGRTSDFIESREYEKPLNVY--GYSKFLFDEYVRQI 154 (307)
T ss_dssp CCCTTCCCHHHHHHHTHHHHHHHHHHHHHHTCCE-EEEEEGGGGTTCCSCBCSSGGGCCCSSHH--HHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccccccccccccc-ccccccccccccccccccccccccccccc--ccccchhhhhcccc
Confidence 0 1344566778864 45555544432 1111 111112 22233445444
Q ss_pred -HhCCCCEEEEecCCcccCCC------------------CCccee--eecCCCCCCccCHHHHHHHHHHHhhCCCCCCcE
Q 021928 221 -MASGIPYTIIRTGVLQNTPG------------------GKQGFQ--FEEGCAANGSLSKEDAAFICVEALESIPQTGLI 279 (305)
Q Consensus 221 -~~~gi~~tilRPg~l~~~~~------------------~~~~~~--~~~~~~~~~~Is~~DvA~~iv~~l~~~~~~~~~ 279 (305)
.+.+++++++||..+.+... .++... .+.+.....+++++|++.++..++.++. ...
T Consensus 155 ~~~~~~~~~~~r~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~d~~~~~~~~~~~~~--~~~ 232 (307)
T d1eq2a_ 155 LPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGV--SGI 232 (307)
T ss_dssp GGGCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHHHHHHHHHHHHHCC--CEE
T ss_pred ccccccccccccceeEeeccccccccccccccccccccccccceeeecCccceeeeeeecccHHHHHHHHhhhcc--ccc
Confidence 45799999999988554221 111111 1334445789999999999999998653 468
Q ss_pred EEEecCC-cCHHHHHHHHHHhhhh
Q 021928 280 FEVVNGE-EKVSDWKKCFSRLMEK 302 (305)
Q Consensus 280 ~~v~~g~-~s~~d~~~~~~~l~~~ 302 (305)
|+++++. .+++++++.+.++.+.
T Consensus 233 ~~~~~~~~~si~~i~~~i~~~~~~ 256 (307)
T d1eq2a_ 233 FNLGTGRAESFQAVADATLAYHKK 256 (307)
T ss_dssp EEESCSCCBCHHHHHHHC------
T ss_pred cccccccchhHHHHHHHHHHhcCC
Confidence 9998766 5899999998776543
|
| >d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.53 E-value=9e-15 Score=131.34 Aligned_cols=200 Identities=12% Similarity=0.013 Sum_probs=130.9
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcch---------hhh---hcCCCcEEeecCCCCHHHHHH-----
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN---------AME---SFGTYVESMAGDASNKKFLKT----- 158 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~---------~~~---~~~~~v~~v~~D~~d~~~~~~----- 158 (305)
..+|+++||||+++||++++++|+++|++|++.+|+.+. ..+ ........+.+|+.|.+++++
T Consensus 5 l~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~ 84 (302)
T d1gz6a_ 5 FDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVKTA 84 (302)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHHHH
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhcccccccccchHHHHHHHHHHH
Confidence 356999999999999999999999999999998876532 111 122234556677777554443
Q ss_pred --HhcCccEEEECCcch------------------------------HhhhhhhcCCCEEEEEcccccccCCCCcccccc
Q 021928 159 --ALRGVRSIICPSEGF------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMK 206 (305)
Q Consensus 159 --~~~~~d~Vi~~~~g~------------------------------~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~ 206 (305)
.+..+|++|++++.. ....+++.+-.+||++||..+..+..+...|..
T Consensus 85 ~~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS~~~~~~~~~~~~Y~a 164 (302)
T d1gz6a_ 85 LDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNFGQANYSA 164 (302)
T ss_dssp HHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHH
T ss_pred HHHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCChhhcCCCCCcHHHHH
Confidence 334689999884410 112244566679999999988777666666655
Q ss_pred hHH--HHHHHHHHHHHHhCCCCEEEEecCCcccCCCCCcceeeecCCCCCCccCHHHHHHHHHHHhhCCC-CCCcEEEEe
Q 021928 207 GNA--RKLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIP-QTGLIFEVV 283 (305)
Q Consensus 207 ~~~--~~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~~~~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~-~~~~~~~v~ 283 (305)
.+. ..+.+.....+...||.+..|.||+......... +......+.++|||.+++.++.... ..|+++.+.
T Consensus 165 sKaal~~lt~~la~E~~~~gIrVN~I~PG~~~t~~~~~~------~~~~~~~~~PedvA~~v~fL~S~~a~itG~~i~vd 238 (302)
T d1gz6a_ 165 AKLGLLGLANTLVIEGRKNNIHCNTIAPNAGSRMTETVM------PEDLVEALKPEYVAPLVLWLCHESCEENGGLFEVG 238 (302)
T ss_dssp HHHHHHHHHHHHHHHTGGGTEEEEEEEEECCSTTTGGGS------CHHHHHHSCGGGTHHHHHHHTSTTCCCCSCEEEEE
T ss_pred HHHHHHHHHHHHHHHHhccCCceeeeCCCCCCcchhhcC------cHhhHhcCCHHHHHHHHHHHcCCCcCCCCcEEEeC
Confidence 432 2222333334566899999999998643221110 1112234678999999999986433 467888877
Q ss_pred cCC--------------------cCHHHHHHHHHHhhh
Q 021928 284 NGE--------------------EKVSDWKKCFSRLME 301 (305)
Q Consensus 284 ~g~--------------------~s~~d~~~~~~~l~~ 301 (305)
+|- .+..++.+.+.++..
T Consensus 239 GG~~~~~~~~~~~g~~~~~~~~~~t~e~i~~~~~~i~d 276 (302)
T d1gz6a_ 239 AGWIGKLRWERTLGAIVRKRNQPMTPEAVRDNWVKICD 276 (302)
T ss_dssp TTEEEEEEEEECCCEECCBTTBCCCHHHHHHTHHHHTC
T ss_pred CCceeEEEEeecCcccccCCCCCCCHHHHHHHHHHHhC
Confidence 651 144677777776653
|
| >d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase sniffer species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=99.52 E-value=2.4e-13 Score=118.27 Aligned_cols=178 Identities=13% Similarity=0.130 Sum_probs=111.1
Q ss_pred CCEEEEEcCCChHHHHHHHHHH---hCCCeEEEEEcCcchhhhh-----cCCCcEEeecCCCCHHHHHHHhc--------
Q 021928 98 RDAVLVTDGDSDIGQMVILSLI---VKRTRIKALVKDKRNAMES-----FGTYVESMAGDASNKKFLKTALR-------- 161 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~---~~g~~V~~~~R~~~~~~~~-----~~~~v~~v~~D~~d~~~~~~~~~-------- 161 (305)
||+||||||+++||++++++|+ ++|++|++.+|++++..+. ...++.++.+|++|.++++++++
T Consensus 2 MKtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~ 81 (248)
T d1snya_ 2 MNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTKD 81 (248)
T ss_dssp CSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHGG
T ss_pred cCEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHhcCCcEEEEEEEeccHHHHHHHHhhhHHHhhc
Confidence 6899999999999999999997 4789999999998764321 24579999999999777665432
Q ss_pred -CccEEEECCcc-----h--------------------------Hhhhhhh-----------cCCCEEEEEcccccccC-
Q 021928 162 -GVRSIICPSEG-----F--------------------------ISNAGSL-----------KGVQHVILLSQLSVYRG- 197 (305)
Q Consensus 162 -~~d~Vi~~~~g-----~--------------------------~~~~a~~-----------~gv~~~V~iSS~~~~~~- 197 (305)
.+|++|++++. . +....++ .+-.++|.+||......
T Consensus 82 ~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S~~g~~~~ 161 (248)
T d1snya_ 82 QGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQG 161 (248)
T ss_dssp GCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGCSTT
T ss_pred CCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhccccccccccccccccccccccccCC
Confidence 47999987331 0 0011111 24568999998765432
Q ss_pred --CCCcccccchHH--HHHHHHHHHHHHhCCCCEEEEecCCcccCCCCCcceeeecCCCCCCccCHHHHHHHHHHHhhC-
Q 021928 198 --SGGIQALMKGNA--RKLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALES- 272 (305)
Q Consensus 198 --~~~~~~~~~~~~--~~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~~~~~~~~~~~~~~~Is~~DvA~~iv~~l~~- 272 (305)
.++...|..+++ ..+.+.....+...++.++.|.||++..+..... ....+++.++.++.++..
T Consensus 162 ~~~~~~~~Y~aSKaal~~lt~~la~e~~~~gI~vn~v~PG~v~T~m~~~~-----------~~~~~~~~~~~i~~~i~~l 230 (248)
T d1snya_ 162 NTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGSS-----------APLDVPTSTGQIVQTISKL 230 (248)
T ss_dssp CCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCTT-----------CSBCHHHHHHHHHHHHHHC
T ss_pred CCCCChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCCcccCCccccc-----------CCCCchHHHHHHHHHHHhc
Confidence 222334444332 2222333344667899999999999754432111 123344444444444432
Q ss_pred -CCCCCcEEEEecCC
Q 021928 273 -IPQTGLIFEVVNGE 286 (305)
Q Consensus 273 -~~~~~~~~~v~~g~ 286 (305)
+...|+.++..+.+
T Consensus 231 ~~~~tG~~i~~dG~~ 245 (248)
T d1snya_ 231 GEKQNGGFVNYDGTP 245 (248)
T ss_dssp CGGGTTCEECTTSCB
T ss_pred CccCCCcEEEECCeE
Confidence 23457777664433
|
| >d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.52 E-value=2.6e-13 Score=117.86 Aligned_cols=187 Identities=13% Similarity=0.086 Sum_probs=122.1
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh---hcCCCcEEeecCCCCHHHHHHHh-------cCccE
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTAL-------RGVRS 165 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~---~~~~~v~~v~~D~~d~~~~~~~~-------~~~d~ 165 (305)
.++|+++||||+++||++++++|+++|++|++++|+.++..+ .+.........|+.+.+.++... ...|.
T Consensus 3 lkGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (248)
T d2o23a1 3 VKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRVDV 82 (248)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCcccccccccccccccccccccccccccccc
Confidence 356999999999999999999999999999999999876433 34567888899999876655433 34576
Q ss_pred EEECC-----cch---------------------------Hhhhh----------hhcCCCEEEEEcccccccCCCCccc
Q 021928 166 IICPS-----EGF---------------------------ISNAG----------SLKGVQHVILLSQLSVYRGSGGIQA 203 (305)
Q Consensus 166 Vi~~~-----~g~---------------------------~~~~a----------~~~gv~~~V~iSS~~~~~~~~~~~~ 203 (305)
+++.. +.. +..++ +..+-.+||++||..+..+..+...
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~~~~~~ 162 (248)
T d2o23a1 83 AVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAA 162 (248)
T ss_dssp EEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCTTCHH
T ss_pred cccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhhccCCCCchH
Confidence 66541 100 00111 1123458999999998877666666
Q ss_pred ccchHH--HHHHHHHHHHHHhCCCCEEEEecCCcccCCCCC--cce--eeecCCCC-CCccCHHHHHHHHHHHhhCCCCC
Q 021928 204 LMKGNA--RKLAEQDESMLMASGIPYTIIRTGVLQNTPGGK--QGF--QFEEGCAA-NGSLSKEDAAFICVEALESIPQT 276 (305)
Q Consensus 204 ~~~~~~--~~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~--~~~--~~~~~~~~-~~~Is~~DvA~~iv~~l~~~~~~ 276 (305)
|...+. ..+.+.....+...++++..|.||.+....... ... .+....+. .-+..++|||.+++.+++.+--.
T Consensus 163 Y~asKaal~~lt~~la~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~pl~~R~g~peevA~~v~fL~s~~~it 242 (248)
T d2o23a1 163 YSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLPEKVCNFLASQVPFPSRLGDPAEYAHLVQAIIENPFLN 242 (248)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC----------CHHHHTCSSSCSCBCHHHHHHHHHHHHHCTTCC
T ss_pred HHHHHHHHHHHHHHHHHHhcccCcceeeeccCceecchhhcCCHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHHhCCCCC
Confidence 655432 222333334456789999999999964322111 000 00011111 23568999999999999866567
Q ss_pred CcEEEE
Q 021928 277 GLIFEV 282 (305)
Q Consensus 277 ~~~~~v 282 (305)
|++++|
T Consensus 243 Gq~I~v 248 (248)
T d2o23a1 243 GEVIRL 248 (248)
T ss_dssp SCEEEE
T ss_pred ceEeEC
Confidence 887765
|
| >d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.51 E-value=1e-13 Score=123.33 Aligned_cols=177 Identities=17% Similarity=0.181 Sum_probs=116.3
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEE---EcCcchhh---h------hcCCCcEEeecCCCCHHHHHHHhc----
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKAL---VKDKRNAM---E------SFGTYVESMAGDASNKKFLKTALR---- 161 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~---~R~~~~~~---~------~~~~~v~~v~~D~~d~~~~~~~~~---- 161 (305)
+|.||||||+++||++++++|++.|.+|+.+ .|+.+... + ..+.++..+.+|++|.+++.++++
T Consensus 2 kkVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~ 81 (285)
T d1jtva_ 2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTE 81 (285)
T ss_dssp CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTT
T ss_pred CCEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhccc
Confidence 4778999999999999999999999876554 44433211 1 123578999999999999887764
Q ss_pred -CccEEEECCcc----h--------------------------HhhhhhhcCCCEEEEEcccccccCCCCcccccchHH-
Q 021928 162 -GVRSIICPSEG----F--------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA- 209 (305)
Q Consensus 162 -~~d~Vi~~~~g----~--------------------------~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~- 209 (305)
.+|+++++++. . ....+++.+-.+||++||..+..+.+....|..++.
T Consensus 82 g~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~~g~~~~~~~~~Y~asKaa 161 (285)
T d1jtva_ 82 GRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFA 161 (285)
T ss_dssp SCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCCTTCHHHHHHHHH
T ss_pred cchhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEechhhcCCCCCchHHHHHHHH
Confidence 36999987331 0 112245566789999999988877666666655442
Q ss_pred -HHHHHHHHHHHHhCCCCEEEEecCCcccCCCCC---c-ceeeecC-----------------CCCCCccCHHHHHHHHH
Q 021928 210 -RKLAEQDESMLMASGIPYTIIRTGVLQNTPGGK---Q-GFQFEEG-----------------CAANGSLSKEDAAFICV 267 (305)
Q Consensus 210 -~~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~---~-~~~~~~~-----------------~~~~~~Is~~DvA~~iv 267 (305)
..+.+.....+...|+.++.|.||++....... . ....... .......+++|||++++
T Consensus 162 l~~l~~~la~El~~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PeeVA~~v~ 241 (285)
T d1jtva_ 162 LEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFREAAQNPEEVAEVFL 241 (285)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHCBCHHHHHHHHH
T ss_pred HHHHHHHHHHHhhccCcEEEEEecCCCCChHHHHhccCHHHHhhccchhHHHHHHHHHHHHhhhhcccCCCHHHHHHHHH
Confidence 223333344566789999999999965322110 0 0000000 00012457899999999
Q ss_pred HHhhCCC
Q 021928 268 EALESIP 274 (305)
Q Consensus 268 ~~l~~~~ 274 (305)
+++..+.
T Consensus 242 ~~~~~~~ 248 (285)
T d1jtva_ 242 TALRAPK 248 (285)
T ss_dssp HHHHCSS
T ss_pred HHHhCCC
Confidence 9998654
|
| >d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=99.51 E-value=1.8e-13 Score=120.72 Aligned_cols=189 Identities=10% Similarity=0.052 Sum_probs=121.7
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchh-h------hhcCCCcEEeecCCCCHHHHHHHhc-------
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-M------ESFGTYVESMAGDASNKKFLKTALR------- 161 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~-~------~~~~~~v~~v~~D~~d~~~~~~~~~------- 161 (305)
..+|++|||||+++||++++++|+++|++|++++|+.++. . +..+..+.++.+|++|.+++.+.++
T Consensus 16 L~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g 95 (272)
T d1g0oa_ 16 LEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFG 95 (272)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHHHHhC
Confidence 3459999999999999999999999999999998875442 1 1234578899999999888776654
Q ss_pred CccEEEECCcch------------------------------HhhhhhhcCCCEEEEEcccccc-cCCCCcccccchH--
Q 021928 162 GVRSIICPSEGF------------------------------ISNAGSLKGVQHVILLSQLSVY-RGSGGIQALMKGN-- 208 (305)
Q Consensus 162 ~~d~Vi~~~~g~------------------------------~~~~a~~~gv~~~V~iSS~~~~-~~~~~~~~~~~~~-- 208 (305)
.+|++|++++.. ....+++ -.++++++|.... .+......|...+
T Consensus 96 ~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~--~g~~i~i~s~~~~~~~~~~~~~Y~asKaa 173 (272)
T d1g0oa_ 96 KLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEI--GGRLILMGSITGQAKAVPKHAVYSGSKGA 173 (272)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCT--TCEEEEECCGGGTCSSCSSCHHHHHHHHH
T ss_pred CCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeecccccccccc--ccccccccccccccccccchhhHHHHHHH
Confidence 579999873310 0011222 2477777665433 3333333443332
Q ss_pred HHHHHHHHHHHHHhCCCCEEEEecCCcccCC---------CCCccee--------eecCCCCCCccCHHHHHHHHHHHhh
Q 021928 209 ARKLAEQDESMLMASGIPYTIIRTGVLQNTP---------GGKQGFQ--------FEEGCAANGSLSKEDAAFICVEALE 271 (305)
Q Consensus 209 ~~~~~~~aE~~l~~~gi~~tilRPg~l~~~~---------~~~~~~~--------~~~~~~~~~~Is~~DvA~~iv~~l~ 271 (305)
...+.+.....+...|+++..|.||++.... ....... .....+...+..++|||.+++.++.
T Consensus 174 l~~ltk~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~~~peevA~~v~fL~s 253 (272)
T d1g0oa_ 174 IETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPIDIARVVCFLAS 253 (272)
T ss_dssp HHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCTTCSCBCHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHhchhCeEEEEEccCCcCChHHHHHHHhhhhcccccchHHHHHHHHHccCCCCCCcCHHHHHHHHHHHhC
Confidence 1222233334456789999999999964211 0000000 0011222456789999999999996
Q ss_pred CCC--CCCcEEEEecCC
Q 021928 272 SIP--QTGLIFEVVNGE 286 (305)
Q Consensus 272 ~~~--~~~~~~~v~~g~ 286 (305)
... -.|+++.|.+|.
T Consensus 254 ~~s~~itG~~i~vDGG~ 270 (272)
T d1g0oa_ 254 NDGGWVTGKVIGIDGGA 270 (272)
T ss_dssp GGGTTCCSCEEEESTTC
T ss_pred chhcCccCceEeECCCC
Confidence 543 478999998874
|
| >d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=99.48 E-value=2.4e-13 Score=117.00 Aligned_cols=182 Identities=16% Similarity=0.192 Sum_probs=118.9
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhc------CccEEEECCc-
Q 021928 99 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR------GVRSIICPSE- 171 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~------~~d~Vi~~~~- 171 (305)
|++|||||+++||++++++|+++|++|++++|+++.. +...+.+|+.+......+.. ..+.++...+
T Consensus 2 K~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~------~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (241)
T d1uaya_ 2 RSALVTGGASGLGRAAALALKARGYRVVVLDLRREGE------DLIYVEGDVTREEDVRRAVARAQEEAPLFAVVSAAGV 75 (241)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCCSS------SSEEEECCTTCHHHHHHHHHHHHHHSCEEEEEECCCC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcccc------cceEeeccccchhhhHHHHHhhhccccccchhhhhhc
Confidence 8999999999999999999999999999999987532 36678899998766554443 2233332211
Q ss_pred -------c--------h---H---------------hhh------hhhcCCCEEEEEcccccccCCCCcccccchHH--H
Q 021928 172 -------G--------F---I---------------SNA------GSLKGVQHVILLSQLSVYRGSGGIQALMKGNA--R 210 (305)
Q Consensus 172 -------g--------~---~---------------~~~------a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~--~ 210 (305)
+ . . ... ..+.+-.+||++||..+..+......|...+. .
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~~~~~~Y~asKaal~ 155 (241)
T d1uaya_ 76 GLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAAYAASKGGVV 155 (241)
T ss_dssp CCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCTTCHHHHHHHHHHH
T ss_pred cccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhccCCCCchhhHHHHHHHH
Confidence 0 0 0 000 12234568999999988877666666655432 2
Q ss_pred HHHHHHHHHHHhCCCCEEEEecCCcccCC----CCCcceeeecCCCC-CCccCHHHHHHHHHHHhhCCCCCCcEEEEecC
Q 021928 211 KLAEQDESMLMASGIPYTIIRTGVLQNTP----GGKQGFQFEEGCAA-NGSLSKEDAAFICVEALESIPQTGLIFEVVNG 285 (305)
Q Consensus 211 ~~~~~aE~~l~~~gi~~tilRPg~l~~~~----~~~~~~~~~~~~~~-~~~Is~~DvA~~iv~~l~~~~~~~~~~~v~~g 285 (305)
.+.+.....+...|+++..|.||++.... .............. ..+..++|||.+++.++...--.|+++.|.+|
T Consensus 156 ~lt~~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~R~g~pedvA~~v~fL~s~~~iTG~~i~VDGG 235 (241)
T d1uaya_ 156 ALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLPEKAKASLAAQVPFPPRLGRPEEYAALVLHILENPMLNGEVVRLDGA 235 (241)
T ss_dssp HHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTSCHHHHHHHHTTCCSSCSCCCHHHHHHHHHHHHHCTTCCSCEEEESTT
T ss_pred HHHHHHHHHHhhcCCceeeecCCcccccccchhhhhHHHHHHhcCCCCCCCcCHHHHHHHHHHHHhCCCCCCCEEEECCc
Confidence 22333334466789999999999964221 10000000011111 33568999999999999865567899999877
Q ss_pred C
Q 021928 286 E 286 (305)
Q Consensus 286 ~ 286 (305)
-
T Consensus 236 ~ 236 (241)
T d1uaya_ 236 L 236 (241)
T ss_dssp C
T ss_pred c
Confidence 4
|
| >d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative carbonyl reductase sniffer species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.47 E-value=9.4e-13 Score=114.53 Aligned_cols=174 Identities=19% Similarity=0.170 Sum_probs=108.5
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCC--eEEEEEcCcchhhhh---cCCCcEEeecCCCCHHHHHHHhc---------Cc
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRT--RIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALR---------GV 163 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~R~~~~~~~~---~~~~v~~v~~D~~d~~~~~~~~~---------~~ 163 (305)
+|+||||||+++||++++++|+++|+ +|++.+|+.++..+. .+.++.++.+|++|.++++++++ ++
T Consensus 3 ~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~~i 82 (250)
T d1yo6a1 3 PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDGL 82 (250)
T ss_dssp CSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGGCC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHhhCCceEEEEEecCCHHHHHHHHHHHHHHhCCCCe
Confidence 49999999999999999999999995 788889998775433 34578999999999887765542 37
Q ss_pred cEEEECCcc-----h--------------------------Hhhhhhh-----------cCCCEEEEEcccccccCCC--
Q 021928 164 RSIICPSEG-----F--------------------------ISNAGSL-----------KGVQHVILLSQLSVYRGSG-- 199 (305)
Q Consensus 164 d~Vi~~~~g-----~--------------------------~~~~a~~-----------~gv~~~V~iSS~~~~~~~~-- 199 (305)
|++|++++- . +....++ ....+++.+|+........
T Consensus 83 dilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~~~~ 162 (250)
T d1yo6a1 83 SLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTS 162 (250)
T ss_dssp CEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTTCCS
T ss_pred EEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceeccccccccccccccCCcc
Confidence 999987431 0 0011111 1124778887765443211
Q ss_pred -----CcccccchHH--HHHHHHHHHHHHhCCCCEEEEecCCcccCCCCCcceeeecCCCCCCccCHHHHHHHHHHHhhC
Q 021928 200 -----GIQALMKGNA--RKLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALES 272 (305)
Q Consensus 200 -----~~~~~~~~~~--~~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~~~~~~~~~~~~~~~Is~~DvA~~iv~~l~~ 272 (305)
+...|..+++ ..+.+.....++..++.++.|.||++....... ...+++++.|+.++..+..
T Consensus 163 ~~~~~~~~aY~aSKaal~~l~~~la~el~~~gI~v~~i~PG~v~T~m~~~-----------~~~~~~e~~a~~~~~~~~~ 231 (250)
T d1yo6a1 163 GSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGK-----------NAALTVEQSTAELISSFNK 231 (250)
T ss_dssp TTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC------------------------HHHHHHHHHHHTT
T ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCCCCCCC-----------CCCCCHHHHHHHHHHHHhc
Confidence 1122333321 112233334456789999999999975432211 2346789999999999876
Q ss_pred CC--CCCcEEEE
Q 021928 273 IP--QTGLIFEV 282 (305)
Q Consensus 273 ~~--~~~~~~~v 282 (305)
+. ..|+.|+-
T Consensus 232 ~~~~~sG~f~~~ 243 (250)
T d1yo6a1 232 LDNSHNGRFFMR 243 (250)
T ss_dssp CCGGGTTCEEET
T ss_pred CCCCCCeEEECC
Confidence 44 45676653
|
| >d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sepiapterin reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.46 E-value=1.7e-13 Score=119.97 Aligned_cols=184 Identities=15% Similarity=0.079 Sum_probs=117.6
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHh---CCCeEEEEEcCcchhhhh--------cCCCcEEeecCCCCHHHHHHHhc----
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIV---KRTRIKALVKDKRNAMES--------FGTYVESMAGDASNKKFLKTALR---- 161 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~---~g~~V~~~~R~~~~~~~~--------~~~~v~~v~~D~~d~~~~~~~~~---- 161 (305)
.+|.++||||+++||++++++|++ +|++|+++.|++++..+. .+.++..+.+|++|.++++++++
T Consensus 5 ~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~~~~ 84 (259)
T d1oaaa_ 5 GCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVRE 84 (259)
T ss_dssp BSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence 459999999999999999999985 799999999998764321 12368889999999988877652
Q ss_pred -------CccEEEECCc-------ch--------------------------HhhhhhhcC--CCEEEEEcccccccCCC
Q 021928 162 -------GVRSIICPSE-------GF--------------------------ISNAGSLKG--VQHVILLSQLSVYRGSG 199 (305)
Q Consensus 162 -------~~d~Vi~~~~-------g~--------------------------~~~~a~~~g--v~~~V~iSS~~~~~~~~ 199 (305)
..|+++++++ +. .....++.+ -.++|++||..+..+.+
T Consensus 85 ~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS~~~~~~~~ 164 (259)
T d1oaaa_ 85 LPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPYK 164 (259)
T ss_dssp SCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTSCCT
T ss_pred hhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCcccccccccccccCCCc
Confidence 2356666522 10 001122222 35899999998887766
Q ss_pred CcccccchHHHH--HHHHHHHHHHhCCCCEEEEecCCcccCCC------CCccee---eecCCCCCCccCHHHHHHHHHH
Q 021928 200 GIQALMKGNARK--LAEQDESMLMASGIPYTIIRTGVLQNTPG------GKQGFQ---FEEGCAANGSLSKEDAAFICVE 268 (305)
Q Consensus 200 ~~~~~~~~~~~~--~~~~aE~~l~~~gi~~tilRPg~l~~~~~------~~~~~~---~~~~~~~~~~Is~~DvA~~iv~ 268 (305)
....|..++..- +.+... ....++++..|.||++..... ...... +..........+++|+|++++.
T Consensus 165 ~~~~Y~asKaal~~lt~~la--~e~~gIrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~p~evA~~i~~ 242 (259)
T d1oaaa_ 165 GWGLYCAGKAARDMLYQVLA--AEEPSVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKSDGALVDCGTSAQKLLG 242 (259)
T ss_dssp TCHHHHHHHHHHHHHHHHHH--HHCTTEEEEEEECCSBSSHHHHHHHHHCSCHHHHHHHHHHHHTTCSBCHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHH--hCCCCCEEEEEEcCCCCCHHHHHhhhcCCCHHHHHHHHhcCCCCCCCCHHHHHHHHHH
Confidence 666665543211 111111 125789999999999643211 000000 0000111335789999999999
Q ss_pred HhhCCC-CCCcEEEE
Q 021928 269 ALESIP-QTGLIFEV 282 (305)
Q Consensus 269 ~l~~~~-~~~~~~~v 282 (305)
++.+.. ..|+.+++
T Consensus 243 ll~~~s~~TG~~idv 257 (259)
T d1oaaa_ 243 LLQKDTFQSGAHVDF 257 (259)
T ss_dssp HHHHCCSCTTEEEET
T ss_pred HhhhccCCCCCeEEe
Confidence 997554 35666664
|
| >d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Helicobacter pylori [TaxId: 210]
Probab=99.39 E-value=2.4e-12 Score=112.98 Aligned_cols=190 Identities=13% Similarity=0.018 Sum_probs=119.4
Q ss_pred CCCEEEEEcCCC--hHHHHHHHHHHhCCCeEEEEEcCcchh---h--hhcCCCcEEeecCCCCHHHHHHHh-------cC
Q 021928 97 ARDAVLVTDGDS--DIGQMVILSLIVKRTRIKALVKDKRNA---M--ESFGTYVESMAGDASNKKFLKTAL-------RG 162 (305)
Q Consensus 97 ~~~~vlVtGatG--~iG~~l~~~L~~~g~~V~~~~R~~~~~---~--~~~~~~v~~v~~D~~d~~~~~~~~-------~~ 162 (305)
++|++|||||+| +||++++++|+++|++|+++.|+++.. . ........++..|+++.+.+.+++ ..
T Consensus 4 ~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g~ 83 (274)
T d2pd4a1 4 KGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLGS 83 (274)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTSC
T ss_pred CCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhCCceeEeeecccchhhHHHHHHHHHHHcCC
Confidence 469999999987 799999999999999999999985421 1 112345778899999977766555 46
Q ss_pred ccEEEECCcch-------------------------------HhhhhhhcCCC-EEEEEcccccccCCCCcccccchH--
Q 021928 163 VRSIICPSEGF-------------------------------ISNAGSLKGVQ-HVILLSQLSVYRGSGGIQALMKGN-- 208 (305)
Q Consensus 163 ~d~Vi~~~~g~-------------------------------~~~~a~~~gv~-~~V~iSS~~~~~~~~~~~~~~~~~-- 208 (305)
+|++|++++.. .....+..+-. .++.+|+.+...+......|...+
T Consensus 84 id~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~~~~~~~y~asK~a 163 (274)
T d2pd4a1 84 LDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKYMAHYNVMGLAKAA 163 (274)
T ss_dssp EEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTTCHHHHHHHHH
T ss_pred CCeEEeecccccccccccccccccchhhhhhhccccccccccccccccccccCcceeeecccccccccccchhhhHHHHH
Confidence 79999873310 00011122222 355556555554444433343322
Q ss_pred HHHHHHHHHHHHHhCCCCEEEEecCCcccCCC-CC---ccee--eecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEE
Q 021928 209 ARKLAEQDESMLMASGIPYTIIRTGVLQNTPG-GK---QGFQ--FEEGCAANGSLSKEDAAFICVEALESIP--QTGLIF 280 (305)
Q Consensus 209 ~~~~~~~aE~~l~~~gi~~tilRPg~l~~~~~-~~---~~~~--~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~ 280 (305)
...+.+.....+...|+++..|.||.+..... .. +... ............++|||.+++.++.+.. -.|+++
T Consensus 164 l~~ltr~lA~e~~~~GIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedIA~~v~fL~S~~s~~itG~~i 243 (274)
T d2pd4a1 164 LESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADFRMILKWNEINAPLRKNVSLEEVGNAGMYLLSSLSSGVSGEVH 243 (274)
T ss_dssp HHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred HHHHHHhhHHHhcCcCceecccccCcccCccccccCchHHHHHHHhhhhhccCCcCHHHHHHHHHHHhChhhCCCcCceE
Confidence 12222333344567899999999998543221 10 0000 0011233466899999999999997543 478999
Q ss_pred EEecCC
Q 021928 281 EVVNGE 286 (305)
Q Consensus 281 ~v~~g~ 286 (305)
.|.+|-
T Consensus 244 ~vDGG~ 249 (274)
T d2pd4a1 244 FVDAGY 249 (274)
T ss_dssp EESTTG
T ss_pred EECCCh
Confidence 999874
|
| >d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 11-beta-hydroxysteroid dehydrogenase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.39 E-value=2.7e-12 Score=112.84 Aligned_cols=172 Identities=13% Similarity=0.098 Sum_probs=113.2
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh-------hcCCCcEEeecCCCCHHHHHHHh-------cC
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME-------SFGTYVESMAGDASNKKFLKTAL-------RG 162 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~-------~~~~~v~~v~~D~~d~~~~~~~~-------~~ 162 (305)
.+|++|||||+++||++++++|+++|++|++++|+.++..+ ..+..+..+.+|+.+.+.+...+ ..
T Consensus 13 ~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g~ 92 (269)
T d1xu9a_ 13 QGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGG 92 (269)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHTS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHHHHHHhCC
Confidence 45999999999999999999999999999999999876432 23456788899999866655433 45
Q ss_pred ccEEEECCcch------------------------------HhhhhhhcCCCEEEEEcccccccCCCCcccccchHHH--
Q 021928 163 VRSIICPSEGF------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR-- 210 (305)
Q Consensus 163 ~d~Vi~~~~g~------------------------------~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~-- 210 (305)
.|.++++++.. +....++. -.++|++||..+..+.+....|..+++.
T Consensus 93 ~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~-~G~ii~isS~~~~~~~p~~~~Y~asKaal~ 171 (269)
T d1xu9a_ 93 LDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQS-NGSIVVVSSLAGKVAYPMVAAYSASKFALD 171 (269)
T ss_dssp CSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEEEGGGTSCCTTCHHHHHHHHHHH
T ss_pred ccccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhc-CCcceEeccchhcCCCCCchHHHHHHHHHH
Confidence 78888763310 11112332 3689999999888777666666554421
Q ss_pred HHHHHHHHHH--HhCCCCEEEEecCCcccCCCCCcceeeecCCCCCCccCHHHHHHHHHHHhhCC
Q 021928 211 KLAEQDESML--MASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESI 273 (305)
Q Consensus 211 ~~~~~aE~~l--~~~gi~~tilRPg~l~~~~~~~~~~~~~~~~~~~~~Is~~DvA~~iv~~l~~~ 273 (305)
.+.+.....+ ...++.++.+.||++........ . .+......++.+++|+.++..+...
T Consensus 172 ~~~~~La~El~~~~~~I~V~~v~PG~v~T~~~~~~---~-~~~~~~~~~~~e~~a~~i~~~~~~~ 232 (269)
T d1xu9a_ 172 GFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKA---V-SGIVHMQAAPKEECALEIIKGGALR 232 (269)
T ss_dssp HHHHHHHHHHHHHTCCCEEEEEEECCBCCHHHHHH---S-CGGGGGGCBCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhhhcCCCEEEEEEecCcCCCcHHHHh---c-cCCccccCCCHHHHHHHHHHHhhcC
Confidence 1122221222 23568899999999643211000 0 1111234578899999999877643
|
| >d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Escherichia coli [TaxId: 562]
Probab=99.39 E-value=2.6e-12 Score=111.75 Aligned_cols=190 Identities=13% Similarity=0.081 Sum_probs=121.8
Q ss_pred CCCEEEEEcCCC--hHHHHHHHHHHhCCCeEEEEEcCcchhh---h--hcCCCcEEeecCCCCHHHHHHHhc-------C
Q 021928 97 ARDAVLVTDGDS--DIGQMVILSLIVKRTRIKALVKDKRNAM---E--SFGTYVESMAGDASNKKFLKTALR-------G 162 (305)
Q Consensus 97 ~~~~vlVtGatG--~iG~~l~~~L~~~g~~V~~~~R~~~~~~---~--~~~~~v~~v~~D~~d~~~~~~~~~-------~ 162 (305)
.+|+||||||+| +||+++++.|+++|++|++..|+++... + ........+..|+.+..++...+. .
T Consensus 4 ~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (258)
T d1qsga_ 4 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWPK 83 (258)
T ss_dssp TTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCSS
T ss_pred CCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHhhcCCcceeecccchHHHHHHHHHHhhhcccc
Confidence 469999999998 8999999999999999999999864321 1 123457788899998777665553 3
Q ss_pred ccEEEECCcc----h---------------------------Hhhhhh--hcCCCEEEEEcccccccCCCCcccccchHH
Q 021928 163 VRSIICPSEG----F---------------------------ISNAGS--LKGVQHVILLSQLSVYRGSGGIQALMKGNA 209 (305)
Q Consensus 163 ~d~Vi~~~~g----~---------------------------~~~~a~--~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~ 209 (305)
.|.+|+++.. . +...+. ..+-+.+|++||.+...+.+....|...++
T Consensus 84 ~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ii~iss~~~~~~~~~~~~Y~~sKa 163 (258)
T d1qsga_ 84 FDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPNYNVMGLAKA 163 (258)
T ss_dssp EEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTTTTHHHHHHH
T ss_pred cceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccCCcEEEEecchhhccCCCCcHHHHHHHH
Confidence 5888876220 0 000010 122246888898877665544445544332
Q ss_pred --HHHHHHHHHHHHhCCCCEEEEecCCcccCCCCC----ccee--eecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcE
Q 021928 210 --RKLAEQDESMLMASGIPYTIIRTGVLQNTPGGK----QGFQ--FEEGCAANGSLSKEDAAFICVEALESIP--QTGLI 279 (305)
Q Consensus 210 --~~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~----~~~~--~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~ 279 (305)
..+.+..-..+..+++++..|+||.+....... .... +....+...+..++|+|.+++.++.+.. -.|++
T Consensus 164 al~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~R~~~peeia~~v~fL~s~~s~~itG~~ 243 (258)
T d1qsga_ 164 SLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAAFLCSDLSAGISGEV 243 (258)
T ss_dssp HHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHTSGGGTTCCSCE
T ss_pred HHHHHHHHHHHHhCccCceeecccccccccccccccchhhhHHHHHHhCCCCCCCcCHHHHHHHHHHHhCchhcCccCce
Confidence 222333344556789999999999965332111 0000 0001122346789999999999996533 57899
Q ss_pred EEEecCC
Q 021928 280 FEVVNGE 286 (305)
Q Consensus 280 ~~v~~g~ 286 (305)
+.|.+|.
T Consensus 244 i~vDGG~ 250 (258)
T d1qsga_ 244 VHVDGGF 250 (258)
T ss_dssp EEESTTG
T ss_pred EEECcCH
Confidence 9998874
|
| >d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.38 E-value=3e-12 Score=112.79 Aligned_cols=73 Identities=16% Similarity=0.176 Sum_probs=59.4
Q ss_pred CEE-EEEcCCChHHHHHHHHHHhC-CCeEEEEEcCcchhhh------hcCCCcEEeecCCCCHHHHHHHh-------cCc
Q 021928 99 DAV-LVTDGDSDIGQMVILSLIVK-RTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTAL-------RGV 163 (305)
Q Consensus 99 ~~v-lVtGatG~iG~~l~~~L~~~-g~~V~~~~R~~~~~~~------~~~~~v~~v~~D~~d~~~~~~~~-------~~~ 163 (305)
|+| |||||+++||++++++|+++ |++|++.+|++++..+ ..+.++.++.+|++|.+++++++ ..+
T Consensus 3 ~rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~g~i 82 (275)
T d1wmaa1 3 IHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGGL 82 (275)
T ss_dssp CCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSSE
T ss_pred CeEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhcCCc
Confidence 555 89999999999999999986 8999999999877432 22457899999999988877655 357
Q ss_pred cEEEECCc
Q 021928 164 RSIICPSE 171 (305)
Q Consensus 164 d~Vi~~~~ 171 (305)
|++|++++
T Consensus 83 DiLVnNAG 90 (275)
T d1wmaa1 83 DVLVNNAG 90 (275)
T ss_dssp EEEEECCC
T ss_pred EEEEEcCC
Confidence 99998744
|
| >d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.37 E-value=1.5e-12 Score=112.39 Aligned_cols=176 Identities=13% Similarity=0.102 Sum_probs=109.9
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHH-------HHhc--CccEEEE
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLK-------TALR--GVRSIIC 168 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~-------~~~~--~~d~Vi~ 168 (305)
+|+||||||+++||++++++|+++|++|+++.+++.... .....+..|..+.+... +.+. .+|++|+
T Consensus 2 gK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iD~lIn 77 (236)
T d1dhra_ 2 ARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA----SASVIVKMTDSFTEQADQVTAEVGKLLGDQKVDAILC 77 (236)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS----SEEEECCCCSCHHHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc----cccceeecccCcHHHHHHHHHHHHHHhCCCCceEEEE
Confidence 599999999999999999999999999999988764321 12334455555443332 2222 4799998
Q ss_pred CCcch-------------------------------HhhhhhhcCCCEEEEEcccccccCCCCcccccchHHH--HHHHH
Q 021928 169 PSEGF-------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--KLAEQ 215 (305)
Q Consensus 169 ~~~g~-------------------------------~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~--~~~~~ 215 (305)
++++. ....+++. .+||++||..+..+.+....|..+++. .+.+.
T Consensus 78 nAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~--G~Iv~isS~~~~~~~~~~~~Y~asKaal~~lt~~ 155 (236)
T d1dhra_ 78 VAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEG--GLLTLAGAKAALDGTPGMIGYGMAKGAVHQLCQS 155 (236)
T ss_dssp CCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE--EEEEEECCGGGGSCCTTBHHHHHHHHHHHHHHHH
T ss_pred CCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccc--cceeEEccHHHcCCccCCcccHHHHHHHHHHHHH
Confidence 74421 00112222 589999999888776666666543321 11111
Q ss_pred HHHHHH--hCCCCEEEEecCCcccCCCCCcceeeecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEEEEe
Q 021928 216 DESMLM--ASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVV 283 (305)
Q Consensus 216 aE~~l~--~~gi~~tilRPg~l~~~~~~~~~~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~v~ 283 (305)
....+. ..++.+..|.||++....... . . .......+++++|+|+.++.++.... ..|..+.|.
T Consensus 156 la~El~~~~~gI~vn~v~PG~v~T~~~~~--~-~-~~~~~~~~~~pe~va~~~~~l~s~~~~~i~G~~i~v~ 223 (236)
T d1dhra_ 156 LAGKNSGMPSGAAAIAVLPVTLDTPMNRK--S-M-PEADFSSWTPLEFLVETFHDWITGNKRPNSGSLIQVV 223 (236)
T ss_dssp HTSTTSSCCTTCEEEEEEESCEECHHHHH--H-S-TTSCGGGSEEHHHHHHHHHHHHTTTTCCCTTCEEEEE
T ss_pred HHHHhccCCCcEEEEEEEeccCcCCcchh--h-C-ccchhhcCCCHHHHHHHHHHHhCCCccCCCCCeEEEE
Confidence 111122 258999999999964321100 0 0 11122457889999999999997544 457777764
|
| >d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Leishmania major [TaxId: 5664]
Probab=99.36 E-value=4.6e-12 Score=111.48 Aligned_cols=189 Identities=10% Similarity=-0.005 Sum_probs=117.5
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhh--------hhcCCCcEE-----------------eecCCCC
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM--------ESFGTYVES-----------------MAGDASN 152 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~--------~~~~~~v~~-----------------v~~D~~d 152 (305)
+..++||||+++||++++++|++.|++|++..|+.+... +..+..... ..+|+++
T Consensus 2 ~pVAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~dv~~ 81 (284)
T d1e7wa_ 2 VPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTL 81 (284)
T ss_dssp CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHhhcCCceEEEEeecccccccccccccccccCCC
Confidence 467899999999999999999999999999887654311 112223333 4556888
Q ss_pred HHHHHHHh-------cCccEEEECCcch-----------------------------Hh-----------h---------
Q 021928 153 KKFLKTAL-------RGVRSIICPSEGF-----------------------------IS-----------N--------- 176 (305)
Q Consensus 153 ~~~~~~~~-------~~~d~Vi~~~~g~-----------------------------~~-----------~--------- 176 (305)
.+++++++ ..+|++|++++.. +. .
T Consensus 82 ~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 161 (284)
T d1e7wa_ 82 FTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGT 161 (284)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHHhCCCCEEEecCCccCCCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccchhhhh
Confidence 77777655 4689999874310 00 0
Q ss_pred -hhhhcCCCEEEEEcccccccCCCCcccccchHH--HHHHHHHHHHHHhCCCCEEEEecCCcc--cCCCCCcceeeecCC
Q 021928 177 -AGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA--RKLAEQDESMLMASGIPYTIIRTGVLQ--NTPGGKQGFQFEEGC 251 (305)
Q Consensus 177 -~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~--~~~~~~aE~~l~~~gi~~tilRPg~l~--~~~~~~~~~~~~~~~ 251 (305)
..++.+...+|.+++.....+..+...|...+. ..+.+.....+...|+++..|.||+.. ..........+....
T Consensus 162 ~~~~~~~~~~ii~~~s~~~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~t~~~~~~~~~~~~~~~~~~ 241 (284)
T d1e7wa_ 162 PAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVDDMPPAVWEGHRSKV 241 (284)
T ss_dssp CGGGSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGGGSCHHHHHHHHTTC
T ss_pred HHHhcCCCCcccccccccccCCccceeeeccccccchhhhHHHHHHhCCccccccccccccccccccCCHHHHHHHHhcC
Confidence 011233457888888777666555555654432 222233334566789999999999721 111100000000111
Q ss_pred CC-CCccCHHHHHHHHHHHhhCCC--CCCcEEEEecCC
Q 021928 252 AA-NGSLSKEDAAFICVEALESIP--QTGLIFEVVNGE 286 (305)
Q Consensus 252 ~~-~~~Is~~DvA~~iv~~l~~~~--~~~~~~~v~~g~ 286 (305)
.. ..+..++|+|.+++.++.+.. -.|+++.|.+|-
T Consensus 242 pl~~R~~~peeiA~~v~fL~S~~s~~itG~~i~VDGG~ 279 (284)
T d1e7wa_ 242 PLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGY 279 (284)
T ss_dssp TTTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred CCCCCCCCHHHHHHHHHHHhCchhcCccCCeEEECcCh
Confidence 11 345689999999999996543 478999999874
|
| >d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Trypanosoma cruzi [TaxId: 5693]
Probab=99.33 E-value=2.6e-11 Score=105.46 Aligned_cols=188 Identities=15% Similarity=0.097 Sum_probs=116.6
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh--------hcCCCcEEeecCCCC----HHHH-------HHH
Q 021928 99 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME--------SFGTYVESMAGDASN----KKFL-------KTA 159 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~--------~~~~~v~~v~~D~~d----~~~~-------~~~ 159 (305)
.++|||||+++||++++++|+++|++|+++.|+.++..+ ..+.....+..|..+ .+.+ .+.
T Consensus 2 ~vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (266)
T d1mxha_ 2 PAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRA 81 (266)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHHHhhcCCceEEEecccccchhHHHHHHHHHHHHHHH
Confidence 478999999999999999999999999999998765321 123456666666543 2333 234
Q ss_pred hcCccEEEECCcch-----------------------Hhh--------------hh---------hhcCCCEEEEEcccc
Q 021928 160 LRGVRSIICPSEGF-----------------------ISN--------------AG---------SLKGVQHVILLSQLS 193 (305)
Q Consensus 160 ~~~~d~Vi~~~~g~-----------------------~~~--------------~a---------~~~gv~~~V~iSS~~ 193 (305)
+..+|++|++++.. ... .. .......++.+|+..
T Consensus 82 ~g~iDilvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (266)
T d1mxha_ 82 FGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAM 161 (266)
T ss_dssp HSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECCGG
T ss_pred hCCCCEEEECCccCCCCcccccccccchhcccccccccccccccccccccchhhhhccccccccccccccccchhhhhcc
Confidence 45789999874310 000 00 012234667777777
Q ss_pred cccCCCCcccccchH--HHHHHHHHHHHHHhCCCCEEEEecCCcccCCCCCcce--eeecCCCC-CCccCHHHHHHHHHH
Q 021928 194 VYRGSGGIQALMKGN--ARKLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGF--QFEEGCAA-NGSLSKEDAAFICVE 268 (305)
Q Consensus 194 ~~~~~~~~~~~~~~~--~~~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~~~~~--~~~~~~~~-~~~Is~~DvA~~iv~ 268 (305)
...+.+....|..++ ...+.+.....+...++++..|.||++.......... .+....+. ..+.+++|||.+++.
T Consensus 162 ~~~~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~t~~~~~~~~~~~~~~~~pl~r~~~~peeva~~v~f 241 (266)
T d1mxha_ 162 TDLPLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPAMPQETQEEYRRKVPLGQSEASAAQIADAIAF 241 (266)
T ss_dssp GGSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCSSSCHHHHHHHHTTCTTTSCCBCHHHHHHHHHH
T ss_pred ccccCcchhhhhhhHHHHhhhHHHHHHHhCccCcEEEEeccCcEeccccCCHHHHHHHHhcCCCCCCCCCHHHHHHHHHH
Confidence 666555555554433 2223333344566789999999999954322211110 01011111 234689999999999
Q ss_pred HhhCCC--CCCcEEEEecCC
Q 021928 269 ALESIP--QTGLIFEVVNGE 286 (305)
Q Consensus 269 ~l~~~~--~~~~~~~v~~g~ 286 (305)
++.+.. ..|+++.|.+|-
T Consensus 242 L~s~~s~~itG~~i~vDGG~ 261 (266)
T d1mxha_ 242 LVSKDAGYITGTTLKVDGGL 261 (266)
T ss_dssp HHSGGGTTCCSCEEEESTTG
T ss_pred HhCchhCCccCCeEEECccH
Confidence 997543 478999999874
|
| >d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.31 E-value=4.7e-12 Score=108.96 Aligned_cols=176 Identities=9% Similarity=0.066 Sum_probs=108.5
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHH-------HHHHh--cCccEEEEC
Q 021928 99 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKF-------LKTAL--RGVRSIICP 169 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~-------~~~~~--~~~d~Vi~~ 169 (305)
.+||||||+++||++++++|+++|++|++++|++.... .....+.+|..+.+. +...+ ..+|++|++
T Consensus 3 gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iD~linn 78 (235)
T d1ooea_ 3 GKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA----DSNILVDGNKNWTEQEQSILEQTASSLQGSQVDGVFCV 78 (235)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS----SEEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhcc----cccceeccccCchhHHHHHHHHHHHHhcCCCeeEEEEC
Confidence 68999999999999999999999999999999875422 123445566654332 22333 347999987
Q ss_pred Ccch-------------------------------HhhhhhhcCCCEEEEEcccccccCCCCcccccchHHH--HHHHHH
Q 021928 170 SEGF-------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--KLAEQD 216 (305)
Q Consensus 170 ~~g~-------------------------------~~~~a~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~~~--~~~~~a 216 (305)
++.. .....++. .++|++||.....+.+....|..++.. .+.+..
T Consensus 79 AG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~--g~Iv~isS~~~~~~~~~~~~Y~asKaal~~l~~~l 156 (235)
T d1ooea_ 79 AGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPG--GLLQLTGAAAAMGPTPSMIGYGMAKAAVHHLTSSL 156 (235)
T ss_dssp CCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE--EEEEEECCGGGGSCCTTBHHHHHHHHHHHHHHHHH
T ss_pred CcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccc--eEEEEeccHHhcCCcccccchHHHHHHHHHHHHHH
Confidence 4410 00112222 589999999888777666666554321 111111
Q ss_pred HHHHH--hCCCCEEEEecCCcccCCCCCcceeeecCCCCCCccCHHHHHHHHHHHhhCCC---CCCcEEEEec
Q 021928 217 ESMLM--ASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIP---QTGLIFEVVN 284 (305)
Q Consensus 217 E~~l~--~~gi~~tilRPg~l~~~~~~~~~~~~~~~~~~~~~Is~~DvA~~iv~~l~~~~---~~~~~~~v~~ 284 (305)
...+. ..++.+..|.||++...... .. . .......+++++|+|+.++..+..+. ..|..+.|..
T Consensus 157 a~e~~~~~~~i~v~~i~Pg~~~T~~~~--~~-~-~~~~~~~~~~~~~va~~~~~~l~~~~~~~~tG~~i~v~~ 225 (235)
T d1ooea_ 157 AAKDSGLPDNSAVLTIMPVTLDTPMNR--KW-M-PNADHSSWTPLSFISEHLLKWTTETSSRPSSGALLKITT 225 (235)
T ss_dssp HSTTSSCCTTCEEEEEEESCBCCHHHH--HH-S-TTCCGGGCBCHHHHHHHHHHHHHCGGGCCCTTCEEEEEE
T ss_pred HHHhccCCCceEEEEEecCcCcCcchh--hh-C-cCCccccCCCHHHHHHHHHHHhcCccccCCCceEEEEEe
Confidence 11111 24678888999996432110 00 0 11123467899999999987665433 4577777743
|
| >d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]
Probab=99.27 E-value=1.5e-11 Score=107.35 Aligned_cols=191 Identities=9% Similarity=0.010 Sum_probs=116.1
Q ss_pred CCCEEEEEcCCC--hHHHHHHHHHHhCCCeEEEEEcCcchh----hhhcCCCcEEeecCCCCHHHHHHHh----------
Q 021928 97 ARDAVLVTDGDS--DIGQMVILSLIVKRTRIKALVKDKRNA----MESFGTYVESMAGDASNKKFLKTAL---------- 160 (305)
Q Consensus 97 ~~~~vlVtGatG--~iG~~l~~~L~~~g~~V~~~~R~~~~~----~~~~~~~v~~v~~D~~d~~~~~~~~---------- 160 (305)
.+|++|||||+| +||++++++|++.|++|++..|+.++. .+..+.+...+.+|+++.+++..++
T Consensus 5 ~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~v~~~~~~~ 84 (268)
T d2h7ma1 5 DGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIGAG 84 (268)
T ss_dssp TTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHCTT
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHcCCceeeEeeecccccccccccchhhhccccC
Confidence 469999999754 699999999999999999999987653 2334567889999999976554443
Q ss_pred cCccEEEECCcc----h-----Hh----------------------hhh-hhcCCCEEEEEcccccccCCCCcccccchH
Q 021928 161 RGVRSIICPSEG----F-----IS----------------------NAG-SLKGVQHVILLSQLSVYRGSGGIQALMKGN 208 (305)
Q Consensus 161 ~~~d~Vi~~~~g----~-----~~----------------------~~a-~~~gv~~~V~iSS~~~~~~~~~~~~~~~~~ 208 (305)
..+|.++++++. . +. ..+ ....-..++.+++.......+....|...+
T Consensus 85 ~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~p~~~~y~~sK 164 (268)
T d2h7ma1 85 NKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPSRAMPAYNWMTVAK 164 (268)
T ss_dssp CCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCSSCCTTTHHHHHHH
T ss_pred CCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhhcccccccccccccccccCcccchhhccc
Confidence 235888877320 0 00 001 111122344555554444444444443322
Q ss_pred --HHHHHHHHHHHHHhCCCCEEEEecCCcccCC-------CCC-ccee--------eec-CCCCCCccCHHHHHHHHHHH
Q 021928 209 --ARKLAEQDESMLMASGIPYTIIRTGVLQNTP-------GGK-QGFQ--------FEE-GCAANGSLSKEDAAFICVEA 269 (305)
Q Consensus 209 --~~~~~~~aE~~l~~~gi~~tilRPg~l~~~~-------~~~-~~~~--------~~~-~~~~~~~Is~~DvA~~iv~~ 269 (305)
...+.+.....+...++++..|.||.+.... ... .... +.. .........++|+|++++.+
T Consensus 165 ~a~~~ltr~lA~e~~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~rr~~~p~dva~~v~fL 244 (268)
T d2h7ma1 165 SALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIGWNMKDATPVAKTVCAL 244 (268)
T ss_dssp HHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHCTTCCCTTCCHHHHHHHHHH
T ss_pred cchhhccccchhhhhccCCcceEEecCCCCChhhhhhccchhhhhhccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHH
Confidence 1222233334456689999999999864221 100 0000 000 11123367899999999999
Q ss_pred hhCCC--CCCcEEEEecCCc
Q 021928 270 LESIP--QTGLIFEVVNGEE 287 (305)
Q Consensus 270 l~~~~--~~~~~~~v~~g~~ 287 (305)
+.+.. -.|+++.|.+|..
T Consensus 245 ~Sd~a~~iTG~~i~vDGG~~ 264 (268)
T d2h7ma1 245 LSDWLPATTGDIIYADGGAH 264 (268)
T ss_dssp HSSSCTTCCSEEEEESTTGG
T ss_pred hCchhcCccCCEEEECcCcc
Confidence 96433 4789999998863
|
| >d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha-hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=99.17 E-value=6.7e-10 Score=95.85 Aligned_cols=178 Identities=12% Similarity=0.094 Sum_probs=98.5
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHh--------cCccEEEEC
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTAL--------RGVRSIICP 169 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~--------~~~d~Vi~~ 169 (305)
||.|+||||+++||++++++|+++|++|++++|+..+. ..|+.+.+...... ..+|.++++
T Consensus 1 mkVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~~~-----------~~d~~~~~~~~~~~~~~~~~~~~~id~lv~~ 69 (257)
T d1fjha_ 1 MSIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEV-----------IADLSTAEGRKQAIADVLAKCSKGMDGLVLC 69 (257)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSE-----------ECCTTSHHHHHHHHHHHHTTCTTCCSEEEEC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChHHH-----------HHHhcCHHHHHHHHHHHHHHhCCCCcEEEEc
Confidence 58899999999999999999999999999999976432 34566544433222 347888876
Q ss_pred Ccc-----h------------------HhhhhhhcCCCEEEEEccccccc---------------------------CC-
Q 021928 170 SEG-----F------------------ISNAGSLKGVQHVILLSQLSVYR---------------------------GS- 198 (305)
Q Consensus 170 ~~g-----~------------------~~~~a~~~gv~~~V~iSS~~~~~---------------------------~~- 198 (305)
++- . ..+...+........+++..... ..
T Consensus 70 Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~i~s~~~~~~~~ 149 (257)
T d1fjha_ 70 AGLGPQTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQ 149 (257)
T ss_dssp CCCCTTCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHHHHHHHTCCTT
T ss_pred CCCCCcHHHHHHHHHHHHHHHHHHHHHhhhhhhhhccCcceeeeeccccchhhhhhhhhhhccCCcEEEEeeehhccCCC
Confidence 320 0 00111222333344443322111 10
Q ss_pred CCcccccchH--HHHHHHHHHHHHHhCCCCEEEEecCCcccCCCC----Ccc--eeeec-CCCCCCccCHHHHHHHHHHH
Q 021928 199 GGIQALMKGN--ARKLAEQDESMLMASGIPYTIIRTGVLQNTPGG----KQG--FQFEE-GCAANGSLSKEDAAFICVEA 269 (305)
Q Consensus 199 ~~~~~~~~~~--~~~~~~~aE~~l~~~gi~~tilRPg~l~~~~~~----~~~--~~~~~-~~~~~~~Is~~DvA~~iv~~ 269 (305)
.+...|...+ ...+.+.....+...||++..|.||++...... ... ..+.. ..+..-+.+++|||.+++.+
T Consensus 150 ~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~PlgR~g~p~eva~~v~fL 229 (257)
T d1fjha_ 150 GGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGESIAKFVPPMGRRAEPSEMASVIAFL 229 (257)
T ss_dssp HHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC---------------------CCCSTTSCCCTHHHHHHHHHH
T ss_pred cchHHHHHHhhhhhccccccccccccccccccccccCCcCChhHHhhcCCHHHHHHHHhcCCCCCCCcCHHHHHHHHHHH
Confidence 0111222211 111122223345668999999999996432110 000 00001 11223456889999999999
Q ss_pred hhCCC--CCCcEEEEecCC
Q 021928 270 LESIP--QTGLIFEVVNGE 286 (305)
Q Consensus 270 l~~~~--~~~~~~~v~~g~ 286 (305)
+.+.. -.|+++.|.+|-
T Consensus 230 ~S~~s~~itG~~i~vDGG~ 248 (257)
T d1fjha_ 230 MSPAASYVHGAQIVIDGGI 248 (257)
T ss_dssp TSGGGTTCCSCEEEESTTH
T ss_pred hCchhCCccCceEEeCCCc
Confidence 96443 478999998773
|
| >d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylene-tetrahydromethanopterin dehydrogenase species: Methylobacterium extorquens [TaxId: 408]
Probab=99.09 E-value=8.8e-11 Score=97.80 Aligned_cols=77 Identities=12% Similarity=0.125 Sum_probs=65.7
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh---cC--CCcEEeecCCCCHHHHHHHhcCccEEEEC
Q 021928 95 PEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FG--TYVESMAGDASNKKFLKTALRGVRSIICP 169 (305)
Q Consensus 95 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~~--~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~ 169 (305)
+..+|+|+||||+|+||++++++|+++|++|+++.|+.++..+. +. ..+.+..+|+.|.+++.+++.++|+||++
T Consensus 20 ~l~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~iDilin~ 99 (191)
T d1luaa1 20 SVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVKGAHFVFTA 99 (191)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTTTCSEEEEC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhccchhhhhhhcccHHHHHHHhcCcCeeeec
Confidence 44679999999999999999999999999999999998774322 11 24677889999999999999999999987
Q ss_pred Cc
Q 021928 170 SE 171 (305)
Q Consensus 170 ~~ 171 (305)
++
T Consensus 100 Ag 101 (191)
T d1luaa1 100 GA 101 (191)
T ss_dssp CC
T ss_pred Cc
Confidence 44
|
| >d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=98.99 E-value=6.7e-09 Score=91.34 Aligned_cols=192 Identities=12% Similarity=0.048 Sum_probs=105.3
Q ss_pred cCCCCEEEEEcCCC--hHHHHHHHHHHhCCCeEEEEEcCcchhh-------------hhcC--C--Cc-EEeecC-----
Q 021928 95 PEARDAVLVTDGDS--DIGQMVILSLIVKRTRIKALVKDKRNAM-------------ESFG--T--YV-ESMAGD----- 149 (305)
Q Consensus 95 ~~~~~~vlVtGatG--~iG~~l~~~L~~~g~~V~~~~R~~~~~~-------------~~~~--~--~v-~~v~~D----- 149 (305)
+.++|++|||||+| +||++++++|+++|++|++..|++.... .... . .. .....|
T Consensus 5 ~L~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (297)
T d1d7oa_ 5 DLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVFDN 84 (297)
T ss_dssp CCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTCCS
T ss_pred CCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchhhhhhHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhhccc
Confidence 45679999999987 8999999999999999999988653200 0000 0 00 111121
Q ss_pred ------------------CCCH----HHHHHHhcCccEEEECCcc------hHhh----------------------hh-
Q 021928 150 ------------------ASNK----KFLKTALRGVRSIICPSEG------FISN----------------------AG- 178 (305)
Q Consensus 150 ------------------~~d~----~~~~~~~~~~d~Vi~~~~g------~~~~----------------------~a- 178 (305)
..+. +.+.+.+.++|++|++++. .+.+ .+
T Consensus 85 ~~~~~~dv~~~~~~~~~~~~~~~~~~~~~~~~~G~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~ 164 (297)
T d1d7oa_ 85 PEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFL 164 (297)
T ss_dssp GGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHG
T ss_pred cccchhhhhhhhhhhhccHHHHHHHHHHHHHHhCCCcccccccccccccccchhhhhcccccccccchhhhhhhhhhHHH
Confidence 1122 2334455688999987331 0000 00
Q ss_pred hh-cCCCEEEEEcccccccC-CCCcccccchHH--HHHHH-HHHHHHHhCCCCEEEEecCCcccCCCCCcce---e---e
Q 021928 179 SL-KGVQHVILLSQLSVYRG-SGGIQALMKGNA--RKLAE-QDESMLMASGIPYTIIRTGVLQNTPGGKQGF---Q---F 247 (305)
Q Consensus 179 ~~-~gv~~~V~iSS~~~~~~-~~~~~~~~~~~~--~~~~~-~aE~~l~~~gi~~tilRPg~l~~~~~~~~~~---~---~ 247 (305)
.. ..-.+++.+++.+.... ......|...+. ..+.+ .+.++....++++..|.||++.......... . .
T Consensus 165 ~~~~~~g~~~~~~~~~~~~~~~~~~~~y~~aKaa~~~l~~~~a~e~~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~ 244 (297)
T d1d7oa_ 165 PIMNPGGASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGFIDTMIEYS 244 (297)
T ss_dssp GGEEEEEEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCCSHHHHHHHHH
T ss_pred HHhhcCCcceeeeehhhcccccccccceecccccccccccccchhccccceEEecccccccccchhhhhccCCHHHHHHH
Confidence 00 11124555555544332 223333433221 11111 1222224579999999999965433211100 0 0
Q ss_pred ecCCCCCCccCHHHHHHHHHHHhhCCC--CCCcEEEEecCC
Q 021928 248 EEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVVNGE 286 (305)
Q Consensus 248 ~~~~~~~~~Is~~DvA~~iv~~l~~~~--~~~~~~~v~~g~ 286 (305)
....+...+..++|||.+++.++.+.. -.|+++.|.+|-
T Consensus 245 ~~~~PlgR~~~peevA~~v~fL~S~~a~~itGq~i~vDGG~ 285 (297)
T d1d7oa_ 245 YNNAPIQKTLTADEVGNAAAFLVSPLASAITGATIYVDNGL 285 (297)
T ss_dssp HHHSSSCCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred HhCCCCCCCCCHHHHHHHHHHHhCchhcCCcCceEEECcCH
Confidence 011122346789999999999996433 478999998874
|
| >d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=98.68 E-value=7.6e-08 Score=86.20 Aligned_cols=36 Identities=11% Similarity=0.086 Sum_probs=31.5
Q ss_pred CCEEEEEc--CCChHHHHHHHHHHhCCCeEEEEEcCcc
Q 021928 98 RDAVLVTD--GDSDIGQMVILSLIVKRTRIKALVKDKR 133 (305)
Q Consensus 98 ~~~vlVtG--atG~iG~~l~~~L~~~g~~V~~~~R~~~ 133 (305)
.|.+|||| ++.+||++++++|++.|.+|++..++..
T Consensus 2 ~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~ 39 (329)
T d1uh5a_ 2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPV 39 (329)
T ss_dssp CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGG
T ss_pred CcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchh
Confidence 48999999 5569999999999999999999887653
|
| >d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn Mja218 species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=98.67 E-value=5.1e-08 Score=75.66 Aligned_cols=89 Identities=18% Similarity=0.132 Sum_probs=71.4
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcC-CCcEEeecCCCCHHHHHHH-hcCccEEEECCcch---
Q 021928 99 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG-TYVESMAGDASNKKFLKTA-LRGVRSIICPSEGF--- 173 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~-~~v~~v~~D~~d~~~~~~~-~~~~d~Vi~~~~g~--- 173 (305)
|+|+|.|+ |.+|+.++++|.+.|++|+++.++++....... .++.++.+|.+|.+.++++ ++.+|+++.+....
T Consensus 1 M~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~~~~~vi~Gd~~~~~~l~~~~i~~a~~vv~~t~~d~~N 79 (132)
T d1lssa_ 1 MYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAVTGKEEVN 79 (132)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEECCSCHHHH
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCcceecCChhhhhhhhhhhhhhhccCcccchhhhhhcChhhhhhhcccCCcHHHH
Confidence 79999998 999999999999999999999999877543222 2578999999999999887 67899999874432
Q ss_pred --HhhhhhhcCCCEEEE
Q 021928 174 --ISNAGSLKGVQHVIL 188 (305)
Q Consensus 174 --~~~~a~~~gv~~~V~ 188 (305)
....++..+++++|.
T Consensus 80 ~~~~~~~k~~~~~~iI~ 96 (132)
T d1lssa_ 80 LMSSLLAKSYGINKTIA 96 (132)
T ss_dssp HHHHHHHHHTTCCCEEE
T ss_pred HHHHHHHHHcCCceEEE
Confidence 233456778887764
|
| >d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn bsu222 species: Bacillus subtilis [TaxId: 1423]
Probab=98.48 E-value=3.2e-07 Score=70.95 Aligned_cols=91 Identities=9% Similarity=0.062 Sum_probs=72.3
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHH-hcCccEEEECCcc-h---
Q 021928 99 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA-LRGVRSIICPSEG-F--- 173 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~-~~~~d~Vi~~~~g-~--- 173 (305)
|+++|.|+ |.+|++++++|.+.|++|+++..+++...+.......++.+|.++++.+.++ ++.+|+||.+.+. .
T Consensus 1 k~~iIiG~-G~~G~~la~~L~~~g~~vvvid~d~~~~~~~~~~~~~~~~gd~~~~~~l~~a~i~~a~~vi~~~~~~~~~~ 79 (134)
T d2hmva1 1 KQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYASYATHAVIANATEENELLSLGIRNFEYVIVAIGANIQAS 79 (134)
T ss_dssp CCEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHHTTTTCSEEEECCTTCTTHHHHHTGGGCSEEEECCCSCHHHH
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCeEEEecCcHHHHHHHHHhCCcceeeecccchhhhccCCccccEEEEEcCchHHhH
Confidence 57889987 9999999999999999999999999886665555678899999999999887 7889999887432 1
Q ss_pred --HhhhhhhcCCCEEEEEc
Q 021928 174 --ISNAGSLKGVQHVILLS 190 (305)
Q Consensus 174 --~~~~a~~~gv~~~V~iS 190 (305)
....++..+..+++.-.
T Consensus 80 ~~~~~~~~~~~~~~iiar~ 98 (134)
T d2hmva1 80 TLTTLLLKELDIPNIWVKA 98 (134)
T ss_dssp HHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHHcCCCcEEeec
Confidence 22334667777776443
|
| >d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Saccharopine reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=98.07 E-value=8.1e-06 Score=65.07 Aligned_cols=73 Identities=10% Similarity=0.063 Sum_probs=58.6
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcC--CCcEEeecCCCCHHHHHHHhcCccEEEECCc
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG--TYVESMAGDASNKKFLKTALRGVRSIICPSE 171 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~--~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~ 171 (305)
.|+|+|.|| |.+|+.+++.|.++||+|+++.|+.+++.+... ........+..+.......+...|.++.+.+
T Consensus 2 ~K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~i~~~~ 76 (182)
T d1e5qa1 2 TKSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVAKHDLVISLIP 76 (182)
T ss_dssp CCEEEEECC-STTHHHHHHHHHTTTCEEEEEESCHHHHHHHHTTCTTEEEEECCTTCHHHHHHHHTTSSEEEECSC
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECChHHHHHHHhcccccccccccccchhhhHhhhhccceeEeecc
Confidence 489999997 999999999999999999999999988655432 2344455666677777888888898887744
|
| >d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO) species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=97.95 E-value=3.8e-06 Score=67.56 Aligned_cols=38 Identities=18% Similarity=0.204 Sum_probs=35.3
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhh
Q 021928 99 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM 136 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~ 136 (305)
|||.|+||+|.+|+++++.|++.||+|++..|++++..
T Consensus 1 Mki~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~~~ 38 (212)
T d1jaya_ 1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAE 38 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHH
T ss_pred CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHHHH
Confidence 78999999999999999999999999999999987743
|
| >d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=97.88 E-value=2.9e-05 Score=60.85 Aligned_cols=95 Identities=16% Similarity=0.067 Sum_probs=55.6
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCC----CeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEECCcch
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKR----TRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEGF 173 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g----~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~g~ 173 (305)
|++|.|.||||.+|+.+++.|++.. .+++++.++...........-.....+..+.+ .+.++|++|++.+..
T Consensus 1 MkkVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s~g~~~~~~~~~~~~~~~~~~~----~~~~~DivF~a~~~~ 76 (146)
T d1t4ba1 1 MQNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQAAPSFGGTTGTLQDAFDLE----ALKALDIIVTCQGGD 76 (146)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTSBCCGGGTCCCBCEETTCHH----HHHTCSEEEECSCHH
T ss_pred CcEEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeeccccccccccccCCceeeecccchh----hhhcCcEEEEecCch
Confidence 5799999999999999999888753 36666665543211100001112223344433 367999999996643
Q ss_pred ----HhhhhhhcCCCEEEEEcccccccC
Q 021928 174 ----ISNAGSLKGVQHVILLSQLSVYRG 197 (305)
Q Consensus 174 ----~~~~a~~~gv~~~V~iSS~~~~~~ 197 (305)
....+.+.|.+-+ .++..+.++-
T Consensus 77 ~s~~~~~~~~~~g~~~~-VID~Ss~fR~ 103 (146)
T d1t4ba1 77 YTNEIYPKLRESGWQGY-WIDAASSLRM 103 (146)
T ss_dssp HHHHHHHHHHHTTCCCE-EEECSSTTTT
T ss_pred HHHHhhHHHHhcCCCee-cccCCccccc
Confidence 3334455666433 3444444553
|
| >d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Vibrio cholerae [TaxId: 666]
Probab=97.64 E-value=0.00014 Score=56.78 Aligned_cols=88 Identities=17% Similarity=0.143 Sum_probs=51.9
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCC----CeEEEEEcCcc--hhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEECCcc
Q 021928 99 DAVLVTDGDSDIGQMVILSLIVKR----TRIKALVKDKR--NAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG 172 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~~~g----~~V~~~~R~~~--~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~g 172 (305)
|+|.|.||||++|+++++.|++.. .++..++.+.. +... +... .....+..+. ..++++|+||++.+.
T Consensus 1 mKVaIiGATGyvG~eLi~lLl~~~~~p~~~i~~~ss~~~~gk~~~-~~~~-~~~~~~~~~~----~~~~~~DvvF~alp~ 74 (147)
T d1mb4a1 1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQIGVPAPN-FGKD-AGMLHDAFDI----ESLKQLDAVITCQGG 74 (147)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSCCSSBCCC-SSSC-CCBCEETTCH----HHHTTCSEEEECSCH
T ss_pred CEEEEECCccHHHHHHHHHHHhcCCCCceEEEEeccccccccccc-cCCc-ceeeecccch----hhhccccEEEEecCc
Confidence 689999999999999999888654 35555543321 1111 1111 1111223343 336899999999664
Q ss_pred h----HhhhhhhcCCC-EEEEEccc
Q 021928 173 F----ISNAGSLKGVQ-HVILLSQL 192 (305)
Q Consensus 173 ~----~~~~a~~~gv~-~~V~iSS~ 192 (305)
. +.....+.|.+ .+|=.|+.
T Consensus 75 ~~s~~~~~~l~~~g~~~~VIDlSsd 99 (147)
T d1mb4a1 75 SYTEKVYPALRQAGWKGYWIDAAST 99 (147)
T ss_dssp HHHHHHHHHHHHTTCCSEEEESSST
T ss_pred hHHHHHhHHHHHcCCceEEEeCCcc
Confidence 3 34445566765 35445554
|
| >d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Thermus thermophilus [TaxId: 274]
Probab=97.64 E-value=5.4e-05 Score=60.60 Aligned_cols=96 Identities=10% Similarity=0.060 Sum_probs=61.6
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEECCcchHh
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEGFIS 175 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~g~~~ 175 (305)
.++++|+|+||+|.+|...++.+...|.+|+++++++++......-+.+.+ .|..+........+++|+||.+.+..+.
T Consensus 26 ~~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~~~~~lGa~~~-i~~~~~~~~~~~~~g~D~v~d~~G~~~~ 104 (171)
T d1iz0a2 26 RPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLALGAEEA-ATYAEVPERAKAWGGLDLVLEVRGKEVE 104 (171)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHHTTCSEE-EEGGGHHHHHHHTTSEEEEEECSCTTHH
T ss_pred CCCCEEEEEeccccchhhhhhhhccccccccccccccccccccccccccee-eehhhhhhhhhccccccccccccchhHH
Confidence 356899999999999999999999999999999998876433222122222 2444433334456789999987654443
Q ss_pred hhhhhc-CCCEEEEEccc
Q 021928 176 NAGSLK-GVQHVILLSQL 192 (305)
Q Consensus 176 ~~a~~~-gv~~~V~iSS~ 192 (305)
.+.+.. .-.++|+++..
T Consensus 105 ~~~~~l~~~G~~v~~G~~ 122 (171)
T d1iz0a2 105 ESLGLLAHGGRLVYIGAA 122 (171)
T ss_dssp HHHTTEEEEEEEEEC---
T ss_pred HHHHHHhcCCcEEEEeCC
Confidence 332221 11367776543
|
| >d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Rck domain from putative potassium channel Kch species: Escherichia coli [TaxId: 562]
Probab=97.63 E-value=0.00015 Score=56.65 Aligned_cols=73 Identities=21% Similarity=0.345 Sum_probs=60.6
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcch----hhhhcCCCcEEeecCCCCHHHHHHH-hcCccEEEECCc
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN----AMESFGTYVESMAGDASNKKFLKTA-LRGVRSIICPSE 171 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~----~~~~~~~~v~~v~~D~~d~~~~~~~-~~~~d~Vi~~~~ 171 (305)
+.+|+|.|. |-+|+.++++|.+.|++|+++..++++ ..+....++.++.+|.+|++.++++ ++.+++||.+.+
T Consensus 3 knHiII~G~-g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~~~vi~Gd~~d~~~L~~a~i~~a~~vi~~~~ 80 (153)
T d1id1a_ 3 KDHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILALSD 80 (153)
T ss_dssp CSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEEECSS
T ss_pred CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHhhcCCcEEEEccCcchHHHHHhccccCCEEEEccc
Confidence 357999998 899999999999999999999998764 2333456799999999999988764 567899998754
|
| >d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase species: Arthrobacter, strain 1c [TaxId: 1663]
Probab=97.62 E-value=7.1e-05 Score=59.85 Aligned_cols=73 Identities=15% Similarity=0.044 Sum_probs=51.2
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhc--------CCCcEEeecCCCCHHHHHHHhcCccEEEEC
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF--------GTYVESMAGDASNKKFLKTALRGVRSIICP 169 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~--------~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~ 169 (305)
.|+|.|.|| |.+|..++..|.++||+|.++.|++++..... .+..+..........++.++++++|.||++
T Consensus 1 sk~iaIiGa-G~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~aD~iii~ 79 (184)
T d1bg6a2 1 SKTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDADVILIV 79 (184)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTTCSEEEEC
T ss_pred CCEEEEECc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCCchhhhhhhhhhhhhhhhhhhHhHhcCCCEEEEE
Confidence 389999998 99999999999999999999999976633211 111111111111113467889999999988
Q ss_pred Cc
Q 021928 170 SE 171 (305)
Q Consensus 170 ~~ 171 (305)
.+
T Consensus 80 v~ 81 (184)
T d1bg6a2 80 VP 81 (184)
T ss_dssp SC
T ss_pred Ec
Confidence 43
|
| >d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Glycinamide ribonucleotide transformylase PurT, N-domain species: Escherichia coli [TaxId: 562]
Probab=97.61 E-value=0.00026 Score=52.51 Aligned_cols=70 Identities=11% Similarity=0.092 Sum_probs=57.3
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhc--CccEEEEC
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--GVRSIICP 169 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~--~~d~Vi~~ 169 (305)
...+|.|.|| |.+|+.++....+.|+++++++.+++....... -+++.+|+.|.+.+.+... .+|+|-+=
T Consensus 10 ~~~kigIlGg-GQL~rMla~aA~~lG~~v~v~d~~~~~PA~~va--~~~i~~~~~d~~~l~~~~~~~~~DviT~E 81 (111)
T d1kjqa2 10 AATRVMLLGS-GELGKEVAIECQRLGVEVIAVDRYADAPAMHVA--HRSHVINMLDGDALRRVVELEKPHYIVPE 81 (111)
T ss_dssp TCCEEEEESC-SHHHHHHHHHHHTTTCEEEEEESSTTCGGGGGS--SEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred CCCEEEEEeC-CHHHHHHHHHHHHCCCEEEEEcCCCCCchhhcC--CeEEECCCCCHHHHHHHHHhhCCceEEEE
Confidence 4578999996 999999999999999999999988765443333 3778899999999988774 57988754
|
| >d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase species: Guinea pig (Cavia porcellus) [TaxId: 10141]
Probab=97.60 E-value=0.00021 Score=57.48 Aligned_cols=98 Identities=12% Similarity=0.076 Sum_probs=64.0
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh--cCCCcEEeecCCCCHHHHHHHh--cCccEEEECCc
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES--FGTYVESMAGDASNKKFLKTAL--RGVRSIICPSE 171 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~--~~~~v~~v~~D~~d~~~~~~~~--~~~d~Vi~~~~ 171 (305)
.++++|||+||+|.+|...++.....|.+|+++++++++.... .+....+..-|-...+.+.+.. +++|+||.+.+
T Consensus 28 ~~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~Ga~~vi~~~~~~~~~~~~~~~~~~Gvd~v~D~vG 107 (182)
T d1v3va2 28 KGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQIGFDAAFNYKTVNSLEEALKKASPDGYDCYFDNVG 107 (182)
T ss_dssp CSSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTSCSCHHHHHHHHCTTCEEEEEESSC
T ss_pred CCCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHHHHHHHhhhhhhhcccccccHHHHHHHHhhcCCCceeEEecC
Confidence 3569999999999999999999999999999999988764322 3322222223333344444444 46899998855
Q ss_pred chH-hh---hhhhcCCCEEEEEcccccc
Q 021928 172 GFI-SN---AGSLKGVQHVILLSQLSVY 195 (305)
Q Consensus 172 g~~-~~---~a~~~gv~~~V~iSS~~~~ 195 (305)
+.. .. .++.. .+++.+.....+
T Consensus 108 ~~~~~~~~~~l~~~--G~~v~~G~~~~~ 133 (182)
T d1v3va2 108 GEFLNTVLSQMKDF--GKIAICGAISVY 133 (182)
T ss_dssp HHHHHHHGGGEEEE--EEEEECCCGGGT
T ss_pred chhhhhhhhhccCC--CeEEeecceeec
Confidence 442 22 22333 367776655444
|
| >d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Ketopantoate reductase PanE species: Escherichia coli [TaxId: 562]
Probab=97.53 E-value=1.5e-05 Score=63.02 Aligned_cols=68 Identities=10% Similarity=0.057 Sum_probs=47.0
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh--cCCCc--EEeecCCCCHHHHHHHhcCccEEEECCc
Q 021928 99 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES--FGTYV--ESMAGDASNKKFLKTALRGVRSIICPSE 171 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~--~~~~v--~~v~~D~~d~~~~~~~~~~~d~Vi~~~~ 171 (305)
|+|+|.|+ |.+|..++..|++.|++|.++.|++++.... ...+. ........+. +.+..+|.||++..
T Consensus 1 MkI~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~D~iii~vk 72 (167)
T d1ks9a2 1 MKITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQPYCSVNLVETDGSIFNESLTANDP----DFLATSDLLLVTLK 72 (167)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCSEEEEEEECTTSCEEEEEEEESCH----HHHHTCSEEEECSC
T ss_pred CEEEEECc-CHHHHHHHHHHHHCCCceEEEEcCHHHhhhhccccCCccccccccccchh----hhhcccceEEEeec
Confidence 79999998 9999999999999999999999998663321 11111 1111111222 34568999998843
|
| >d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative enoyl reductase domain of polyketide synthase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=97.49 E-value=0.00011 Score=58.87 Aligned_cols=95 Identities=16% Similarity=0.109 Sum_probs=62.7
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCH---HHHHHHh--cCccEEEECCc
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNK---KFLKTAL--RGVRSIICPSE 171 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~---~~~~~~~--~~~d~Vi~~~~ 171 (305)
++++|||+||+|.+|...++.+...|.+|+++++++++.......+...+ .|..+. +.+.+.. +++|+||.+.+
T Consensus 25 ~g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~~~l~~~Ga~~v-i~~~~~~~~~~v~~~t~~~g~d~v~d~~g 103 (183)
T d1pqwa_ 25 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSRLGVEYV-GDSRSVDFADEILELTDGYGVDVVLNSLA 103 (183)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHTTCCSEE-EETTCSTHHHHHHHHTTTCCEEEEEECCC
T ss_pred CCCEEEEECCCCCcccccchhhccccccceeeeccccccccccccccccc-ccCCccCHHHHHHHHhCCCCEEEEEeccc
Confidence 45899999999999999999999999999999998776433222223322 244442 4444444 46899998855
Q ss_pred chHhh----hhhhcCCCEEEEEccccc
Q 021928 172 GFISN----AGSLKGVQHVILLSQLSV 194 (305)
Q Consensus 172 g~~~~----~a~~~gv~~~V~iSS~~~ 194 (305)
+...+ .++.. .++|.++....
T Consensus 104 ~~~~~~~~~~l~~~--G~~v~~G~~~~ 128 (183)
T d1pqwa_ 104 GEAIQRGVQILAPG--GRFIELGKKDV 128 (183)
T ss_dssp THHHHHHHHTEEEE--EEEEECSCGGG
T ss_pred chHHHHHHHHhcCC--CEEEEEccCCC
Confidence 43222 22333 47887754443
|
| >d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.47 E-value=0.00012 Score=58.44 Aligned_cols=92 Identities=14% Similarity=0.068 Sum_probs=60.0
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCH---HHHHHHhc--CccEEEECCc
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNK---KFLKTALR--GVRSIICPSE 171 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~---~~~~~~~~--~~d~Vi~~~~ 171 (305)
++.+|||+||+|.+|...++.+...|.+|+++++++++......-+...+ .|..+. +.+.+... ++|+|+.+.+
T Consensus 28 ~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~~~~~~~Ga~~v-i~~~~~~~~~~i~~~t~~~g~d~v~d~~g 106 (174)
T d1yb5a2 28 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQNGAHEV-FNHREVNYIDKIKKYVGEKGIDIIIEMLA 106 (174)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEE-EETTSTTHHHHHHHHHCTTCEEEEEESCH
T ss_pred CCCEEEEEeccccccccccccccccCcccccccccccccccccccCcccc-cccccccHHHHhhhhhccCCceEEeeccc
Confidence 46899999999999999999999999999999998766432211112222 355543 33444433 5799998855
Q ss_pred chHhh----hhhhcCCCEEEEEcc
Q 021928 172 GFISN----AGSLKGVQHVILLSQ 191 (305)
Q Consensus 172 g~~~~----~a~~~gv~~~V~iSS 191 (305)
+...+ .++.. .++|.+..
T Consensus 107 ~~~~~~~~~~l~~~--G~iv~~G~ 128 (174)
T d1yb5a2 107 NVNLSKDLSLLSHG--GRVIVVGS 128 (174)
T ss_dssp HHHHHHHHHHEEEE--EEEEECCC
T ss_pred HHHHHHHHhccCCC--CEEEEEec
Confidence 43222 22233 47887753
|
| >d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=97.46 E-value=0.0002 Score=56.52 Aligned_cols=66 Identities=12% Similarity=0.089 Sum_probs=47.8
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEECCc
Q 021928 99 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE 171 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~ 171 (305)
|+|.|.|+ |.+|+.+++.|.++|++|.+.+|+++........++.-...| + .++++++|.||.+.+
T Consensus 1 MkI~iIG~-G~mG~~lA~~l~~~g~~V~~~d~~~~~~~~a~~~~~~~~~~~--~----~~~~~~~DiIilavp 66 (165)
T d2f1ka2 1 MKIGVVGL-GLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDEAGQ--D----LSLLQTAKIIFLCTP 66 (165)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSCSEEES--C----GGGGTTCSEEEECSC
T ss_pred CEEEEEee-cHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHhhccceeee--e----cccccccccccccCc
Confidence 68999987 999999999999999999999999766443222221111111 1 246789999998854
|
| >d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=97.43 E-value=0.00022 Score=55.50 Aligned_cols=71 Identities=18% Similarity=0.192 Sum_probs=48.1
Q ss_pred EEEEEcCCChHHHHHHHHHHhCCC--eEEEEEcCcchhhh--hcCC-CcEEeecCCCCHHHHHHHhcCccEEEECCc
Q 021928 100 AVLVTDGDSDIGQMVILSLIVKRT--RIKALVKDKRNAME--SFGT-YVESMAGDASNKKFLKTALRGVRSIICPSE 171 (305)
Q Consensus 100 ~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~R~~~~~~~--~~~~-~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~ 171 (305)
+|.|+||+|.+|+.++..|+.+|. ++++++.++.+... .... .......-+ ...+..++++++|+||.+++
T Consensus 2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~a~Dl~~~~~~~~~~~~~-~~~~~~~~~~~aDivVitag 77 (144)
T d1mlda1 2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETRATVKGYL-GPEQLPDCLKGCDVVVIPAG 77 (144)
T ss_dssp EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHHHHTTSSSSCEEEEEE-SGGGHHHHHTTCSEEEECCS
T ss_pred eEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchhhHHHhhhhhhcCCCeEE-cCCChHHHhCCCCEEEECCC
Confidence 799999999999999999999884 78888877654221 1111 111111111 23556788999999998733
|
| >d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC species: Thermotoga maritima [TaxId: 2336]
Probab=97.37 E-value=0.00043 Score=55.60 Aligned_cols=92 Identities=11% Similarity=-0.013 Sum_probs=51.9
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCC-CeEEEEEcCcc--h-hhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEECCc-c
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKR--N-AMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE-G 172 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~R~~~--~-~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~-g 172 (305)
|++|.|.||||++|+++++.|.+.. .++..+..+.. + ..+..+....-......+.+ ...+++|+||.+.+ +
T Consensus 1 MikVaIvGATGyvG~eLirlL~~HP~~ei~~l~s~~~aG~~i~~~~p~~~~~~~~~~~~~~---~~~~~~dvvf~a~p~~ 77 (176)
T d1vkna1 1 MIRAGIIGATGYTGLELVRLLKNHPEAKITYLSSRTYAGKKLEEIFPSTLENSILSEFDPE---KVSKNCDVLFTALPAG 77 (176)
T ss_dssp CEEEEEESTTSHHHHHHHHHHHHCTTEEEEEEECSTTTTSBHHHHCGGGCCCCBCBCCCHH---HHHHHCSEEEECCSTT
T ss_pred CeEEEEECCCcHHHHHHHHHHHhCCCceEEEeeccccCCCcccccCchhhccccccccCHh---HhccccceEEEccccH
Confidence 5799999999999999999999865 47766643321 1 11112111111112223433 34458999998854 3
Q ss_pred hHhhhhhhcCCCEEEEEccc
Q 021928 173 FISNAGSLKGVQHVILLSQL 192 (305)
Q Consensus 173 ~~~~~a~~~gv~~~V~iSS~ 192 (305)
.-.+.+.+..-.++|=.|+.
T Consensus 78 ~s~~~~~~~~~~~VIDlSad 97 (176)
T d1vkna1 78 ASYDLVRELKGVKIIDLGAD 97 (176)
T ss_dssp HHHHHHTTCCSCEEEESSST
T ss_pred HHHHHHHhhccceEEecCcc
Confidence 32233333222356666654
|
| >d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamyl tRNA-reductase middle domain species: Archaeon Methanopyrus kandleri [TaxId: 2320]
Probab=97.35 E-value=0.00013 Score=57.81 Aligned_cols=69 Identities=17% Similarity=0.162 Sum_probs=52.6
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcchhhhhcCC-CcEEeecCCCCHHHHHHHhcCccEEEECC
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGT-YVESMAGDASNKKFLKTALRGVRSIICPS 170 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~-~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~ 170 (305)
...++|||.|+ |.+|+.+++.|...|+ ++.+..|+.+++.+.... +.+++ +.+.+.+.+..+|+||.++
T Consensus 22 l~~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~~~~~~-----~~~~~~~~l~~~Divi~at 92 (159)
T d1gpja2 22 LHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGEAV-----RFDELVDHLARSDVVVSAT 92 (159)
T ss_dssp CTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCEEC-----CGGGHHHHHHTCSEEEECC
T ss_pred cccCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhhhcccc-----cchhHHHHhccCCEEEEec
Confidence 35699999998 9999999999999997 688899987775443221 23332 2356778899999999883
|
| >d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: B. subtilis YhfP homologue species: Bacillus stearothermophilus [TaxId: 1422]
Probab=97.32 E-value=0.00019 Score=57.81 Aligned_cols=97 Identities=15% Similarity=0.118 Sum_probs=59.4
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh--hcCCCcEEeecCCCCH-HHHHHHh--cCccEEEECCc
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME--SFGTYVESMAGDASNK-KFLKTAL--RGVRSIICPSE 171 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~--~~~~~v~~v~~D~~d~-~~~~~~~--~~~d~Vi~~~~ 171 (305)
++.+|||+||+|++|...++.+...|.+|++.++++++... ..+.. .++ |..+. +...+.. +++|+||.+.+
T Consensus 31 ~g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~~~~~lGa~-~vi--~~~~~~~~~~~~~~~~gvD~vid~vg 107 (176)
T d1xa0a2 31 ERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRVLGAK-EVL--AREDVMAERIRPLDKQRWAAAVDPVG 107 (176)
T ss_dssp GGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHHTTCS-EEE--ECC---------CCSCCEEEEEECST
T ss_pred CCCEEEEEeccchHHHHHHHHHHHcCCceEEecCchHHHHHHHhcccc-eee--ecchhHHHHHHHhhccCcCEEEEcCC
Confidence 35899999999999999999998999999999998877432 23321 222 33221 1222222 36899997744
Q ss_pred c-hHhhhhhh-cCCCEEEEEccccccc
Q 021928 172 G-FISNAGSL-KGVQHVILLSQLSVYR 196 (305)
Q Consensus 172 g-~~~~~a~~-~gv~~~V~iSS~~~~~ 196 (305)
+ .+...... ..-.|+|.+...+...
T Consensus 108 g~~~~~~l~~l~~~Griv~~G~~~g~~ 134 (176)
T d1xa0a2 108 GRTLATVLSRMRYGGAVAVSGLTGGAE 134 (176)
T ss_dssp TTTHHHHHHTEEEEEEEEECSCCSSSC
T ss_pred chhHHHHHHHhCCCceEEEeecccCcc
Confidence 3 33333222 1224888887665443
|
| >d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD species: Escherichia coli [TaxId: 562]
Probab=97.32 E-value=0.0005 Score=49.04 Aligned_cols=82 Identities=11% Similarity=0.118 Sum_probs=57.5
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcch-hhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEECCc----
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-AMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE---- 171 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~-~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~---- 171 (305)
.+|+|+|.|. |..|..+++.|.++|++|++.+.+... ..+.......+..+...+ ..+.++|.||...+
T Consensus 4 ~~K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~d~vi~SPGi~~~ 77 (93)
T d2jfga1 4 QGKNVVIIGL-GLTGLSCVDFFLARGVTPRVMDTRMTPPGLDKLPEAVERHTGSLND-----EWLMAADLIVASPGIALA 77 (93)
T ss_dssp TTCCEEEECC-SHHHHHHHHHHHHTTCCCEEEESSSSCTTGGGSCTTSCEEESBCCH-----HHHHHCSEEEECTTSCTT
T ss_pred CCCEEEEEeE-CHHHHHHHHHHHHCCCEEEEeeCCcCchhHHHHhhccceeecccch-----hhhccCCEEEECCCCCCC
Confidence 4689999998 999999999999999999999886543 223334455565555432 23567899997621
Q ss_pred chHhhhhhhcCCC
Q 021928 172 GFISNAGSLKGVQ 184 (305)
Q Consensus 172 g~~~~~a~~~gv~ 184 (305)
......+++.|++
T Consensus 78 ~~~~~~a~~~gi~ 90 (93)
T d2jfga1 78 HPSLSAAADAGIE 90 (93)
T ss_dssp SHHHHHHHHTTCE
T ss_pred CHHHHHHHHcCCC
Confidence 3355666677764
|
| >d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=97.31 E-value=0.00013 Score=50.53 Aligned_cols=39 Identities=13% Similarity=0.187 Sum_probs=35.6
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchh
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA 135 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~ 135 (305)
+.++|+|+||+|++|...++.+...|++|+++++++++.
T Consensus 31 ~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k~ 69 (77)
T d1o8ca2 31 QDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTH 69 (77)
T ss_dssp GGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGH
T ss_pred CCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHHH
Confidence 458999999999999999999899999999999998764
|
| >d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: MJ0490, lactate/malate dehydrogenase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=97.28 E-value=0.0009 Score=51.92 Aligned_cols=69 Identities=10% Similarity=0.081 Sum_probs=46.9
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCC--CeEEEEEcCcch--hh----hh------cCCCcEEeecCCCCHHHHHHHhcCcc
Q 021928 99 DAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRN--AM----ES------FGTYVESMAGDASNKKFLKTALRGVR 164 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~~~g--~~V~~~~R~~~~--~~----~~------~~~~v~~v~~D~~d~~~~~~~~~~~d 164 (305)
|+|.|+||+|.+|+.++..|+.++ .++.++++++.. .. +. ....+++...--.| .+.++++|
T Consensus 1 MKV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~d----~~~l~~aD 76 (145)
T d1hyea1 1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDEN----LRIIDESD 76 (145)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETTC----GGGGTTCS
T ss_pred CEEEEECCCChHHHHHHHHHHhCCcccccccccchhhhHhhhcccccchhcccccccCCccccCCcch----HHHhccce
Confidence 689999999999999999999998 488888887532 11 11 11233333221112 24688999
Q ss_pred EEEECCc
Q 021928 165 SIICPSE 171 (305)
Q Consensus 165 ~Vi~~~~ 171 (305)
+||.+++
T Consensus 77 vVVitAG 83 (145)
T d1hyea1 77 VVIITSG 83 (145)
T ss_dssp EEEECCS
T ss_pred EEEEecc
Confidence 9998743
|
| >d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Putative shikimate dehydrogenase YdiB species: Escherichia coli [TaxId: 562]
Probab=97.25 E-value=0.00069 Score=54.43 Aligned_cols=75 Identities=8% Similarity=0.037 Sum_probs=59.2
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcchhhh------hcC--CCcEEeecCCCCHHHHHHHhcCccEE
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAME------SFG--TYVESMAGDASNKKFLKTALRGVRSI 166 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~------~~~--~~v~~v~~D~~d~~~~~~~~~~~d~V 166 (305)
...++|+|.|+ |+.|++++..|.+.|. +++++.|++++... .+. ........|+.+.+.+...+..+|.|
T Consensus 16 l~~k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dii 94 (182)
T d1vi2a1 16 IKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALASADIL 94 (182)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHTCSEE
T ss_pred cCCCEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhcCcceEeeecccccchhhhhccccee
Confidence 35699999998 8999999999999996 78888998765321 111 12456678899999999999999999
Q ss_pred EECCc
Q 021928 167 ICPSE 171 (305)
Q Consensus 167 i~~~~ 171 (305)
|++++
T Consensus 95 IN~Tp 99 (182)
T d1vi2a1 95 TNGTK 99 (182)
T ss_dssp EECSS
T ss_pred ccccC
Confidence 98843
|
| >d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Usg-1 protein homolog PA3116 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=97.25 E-value=0.00032 Score=54.52 Aligned_cols=87 Identities=15% Similarity=0.088 Sum_probs=50.4
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCC---eEEEEEcCcchhh--hhcCCCcEEeecCCCCHHHHHHHhcCccEEEECCcc
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRT---RIKALVKDKRNAM--ESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG 172 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~---~V~~~~R~~~~~~--~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~g 172 (305)
+++|.|.||||++|+++++.|.+++| ++..+..+...-. ............+- ..+.++|.+|.+.+.
T Consensus 2 ~mnVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s~~~~Gk~i~~~~~~~~~~~~~~-------~~~~~~d~vf~a~p~ 74 (144)
T d2hjsa1 2 PLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQRMGFAESSLRVGDVDS-------FDFSSVGLAFFAAAA 74 (144)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTCEEEETTEEEECEEGGG-------CCGGGCSEEEECSCH
T ss_pred CCEEEEECCCCHHHHHHHHHHHhcCCCceEEEEEeecccCCcceeeccccchhccchh-------hhhccceEEEecCCc
Confidence 48999999999999999999986653 6766644322111 10111111111111 235688999988654
Q ss_pred h----HhhhhhhcCCCEEEEEccc
Q 021928 173 F----ISNAGSLKGVQHVILLSQL 192 (305)
Q Consensus 173 ~----~~~~a~~~gv~~~V~iSS~ 192 (305)
. ....+.+.|+ ++|-.|+.
T Consensus 75 ~~s~~~~~~~~~~g~-~VID~Ss~ 97 (144)
T d2hjsa1 75 EVSRAHAERARAAGC-SVIDLSGA 97 (144)
T ss_dssp HHHHHHHHHHHHTTC-EEEETTCT
T ss_pred chhhhhccccccCCc-eEEeechh
Confidence 3 2233344554 56555654
|
| >d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Escherichia coli [TaxId: 562]
Probab=97.23 E-value=0.0002 Score=57.17 Aligned_cols=93 Identities=12% Similarity=0.068 Sum_probs=61.2
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh--hcCCCcEEeecCCCCH---HHHHHHhc--CccEEEEC
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME--SFGTYVESMAGDASNK---KFLKTALR--GVRSIICP 169 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~--~~~~~v~~v~~D~~d~---~~~~~~~~--~~d~Vi~~ 169 (305)
++++|+|+||+|.+|...++.+...|.+|+++++++++... .++. -++ .|..+. +.+.++-. ++|+|+.+
T Consensus 28 ~g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~~~~lGa-~~v--i~~~~~d~~~~v~~~t~g~g~d~v~d~ 104 (179)
T d1qora2 28 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALKAGA-WQV--INYREEDLVERLKEITGGKKVRVVYDS 104 (179)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTC-SEE--EETTTSCHHHHHHHHTTTCCEEEEEEC
T ss_pred CCCEEEEEccccccchHHHHHHHHhCCeEeecccchHHHHHHHhcCC-eEE--EECCCCCHHHHHHHHhCCCCeEEEEeC
Confidence 46899999999999999999999999999999999877432 2332 122 355542 34444443 47999987
Q ss_pred Ccch-Hhhh---hhhcCCCEEEEEccccc
Q 021928 170 SEGF-ISNA---GSLKGVQHVILLSQLSV 194 (305)
Q Consensus 170 ~~g~-~~~~---a~~~gv~~~V~iSS~~~ 194 (305)
.++. +... .+..| +++..+....
T Consensus 105 ~g~~~~~~~~~~l~~~G--~~v~~g~~~~ 131 (179)
T d1qora2 105 VGRDTWERSLDCLQRRG--LMVSFGNSSG 131 (179)
T ss_dssp SCGGGHHHHHHTEEEEE--EEEECCCTTC
T ss_pred ccHHHHHHHHHHHhcCC--eeeecccccC
Confidence 5443 2222 22333 6766655443
|
| >d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Siroheme synthase N-terminal domain-like domain: Siroheme synthase CysG, domain 1 species: Salmonella typhimurium [TaxId: 90371]
Probab=97.21 E-value=0.00078 Score=49.73 Aligned_cols=88 Identities=13% Similarity=0.109 Sum_probs=63.3
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh-hc-CCCcEEeecCCCCHHHHHHHhcCccEEEECCcc
Q 021928 95 PEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME-SF-GTYVESMAGDASNKKFLKTALRGVRSIICPSEG 172 (305)
Q Consensus 95 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~-~~-~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~g 172 (305)
+..+++|+|.|+ |.+|..-++.|++.|.+|++++........ .. ..+++++..++.+ ..+.+++.|+.+.+.
T Consensus 9 ~l~~k~vlVvG~-G~va~~ka~~ll~~ga~v~v~~~~~~~~~~~~~~~~~i~~~~~~~~~-----~dl~~~~lv~~at~d 82 (113)
T d1pjqa1 9 QLRDRDCLIVGG-GDVAERKARLLLEAGARLTVNALTFIPQFTVWANEGMLTLVEGPFDE-----TLLDSCWLAIAATDD 82 (113)
T ss_dssp CCBTCEEEEECC-SHHHHHHHHHHHHTTBEEEEEESSCCHHHHHHHTTTSCEEEESSCCG-----GGGTTCSEEEECCSC
T ss_pred EeCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeccCChHHHHHHhcCCceeeccCCCH-----HHhCCCcEEeecCCC
Confidence 345699999998 999999999999999999999877654322 22 2467888877765 237889999987443
Q ss_pred -----hHhhhhhhcCCCEEEEEc
Q 021928 173 -----FISNAGSLKGVQHVILLS 190 (305)
Q Consensus 173 -----~~~~~a~~~gv~~~V~iS 190 (305)
.+...+++.++ +|.+.
T Consensus 83 ~~~n~~i~~~a~~~~i--lVNv~ 103 (113)
T d1pjqa1 83 DTVNQRVSDAAESRRI--FCNVV 103 (113)
T ss_dssp HHHHHHHHHHHHHTTC--EEEET
T ss_pred HHHHHHHHHHHHHcCC--EEEeC
Confidence 24455666654 55544
|
| >d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Lactobacillus pentosus [TaxId: 1589]
Probab=97.17 E-value=0.00093 Score=51.87 Aligned_cols=65 Identities=8% Similarity=0.158 Sum_probs=48.2
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCC--CeEEEEEcCcchhhh---------hcCCCcEEeecCCCCHHHHHHHhcCccEE
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRNAME---------SFGTYVESMAGDASNKKFLKTALRGVRSI 166 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g--~~V~~~~R~~~~~~~---------~~~~~v~~v~~D~~d~~~~~~~~~~~d~V 166 (305)
+++|.|.|+ |.+|+.++..|+.+| .+|+++++++++... .+.....+..+|+ +.++++|+|
T Consensus 5 ~~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~~~d~-------~~~~~adiv 76 (146)
T d1ez4a1 5 HQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEY-------SDCKDADLV 76 (146)
T ss_dssp BCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCG-------GGGTTCSEE
T ss_pred CCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccccccCCceEeeccH-------HHhccccEE
Confidence 589999996 999999999999988 589999988755211 1222345555554 347899999
Q ss_pred EECC
Q 021928 167 ICPS 170 (305)
Q Consensus 167 i~~~ 170 (305)
+.++
T Consensus 77 vita 80 (146)
T d1ez4a1 77 VITA 80 (146)
T ss_dssp EECC
T ss_pred EEec
Confidence 9873
|
| >d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Potassium channel-related protein MthK species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]
Probab=97.15 E-value=0.00037 Score=52.75 Aligned_cols=70 Identities=20% Similarity=0.269 Sum_probs=56.9
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHH-hcCccEEEECCc
Q 021928 99 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA-LRGVRSIICPSE 171 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~-~~~~d~Vi~~~~ 171 (305)
|+|+|.|. |.+|+++++.| ++++|+++..+++........++.++.+|.++++.++++ ++.+++++.+.+
T Consensus 1 kHivI~G~-g~~g~~l~~~L--~~~~i~vi~~d~~~~~~~~~~~~~~i~Gd~~~~~~L~~a~i~~A~~vi~~~~ 71 (129)
T d2fy8a1 1 RHVVICGW-SESTLECLREL--RGSEVFVLAEDENVRKKVLRSGANFVHGDPTRVSDLEKANVRGARAVIVNLE 71 (129)
T ss_dssp CCEEEESC-CHHHHHHHHTS--CGGGEEEEESCTTHHHHHHHTTCEEEESCTTSHHHHHHTTCTTCSEEEECCS
T ss_pred CEEEEECC-CHHHHHHHHHH--cCCCCEEEEcchHHHHHHHhcCccccccccCCHHHHHHhhhhcCcEEEEecc
Confidence 57899997 88999999998 467888888888765554455789999999999988774 567899998754
|
| >d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Pyrroline-5-carboxylate reductase ProC species: Neisseria meningitidis, serogroup B [TaxId: 487]
Probab=97.09 E-value=0.00048 Score=53.68 Aligned_cols=85 Identities=15% Similarity=0.056 Sum_probs=55.7
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCC-CeEEEEEcCcchhhhhcCC-CcEEeecCCCCHHHHHHHhcCccEEEEC-CcchHh
Q 021928 99 DAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAMESFGT-YVESMAGDASNKKFLKTALRGVRSIICP-SEGFIS 175 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~R~~~~~~~~~~~-~v~~v~~D~~d~~~~~~~~~~~d~Vi~~-~~g~~~ 175 (305)
|+|.+.|+ |.+|+++++.|++.| ++|++..|++++....... .+... -|.. .+..+|+||.+ .+..+.
T Consensus 1 MkI~fIG~-G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~~~~~~~-~~~~-------~v~~~Div~lavkP~~~~ 71 (152)
T d1yqga2 1 MNVYFLGG-GNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKELGVETS-ATLP-------ELHSDDVLILAVKPQDME 71 (152)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHTCCEEE-SSCC-------CCCTTSEEEECSCHHHHH
T ss_pred CEEEEEcC-cHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhhhcccccc-cccc-------cccccceEEEecCHHHHH
Confidence 68999997 999999999999887 8999999998775443221 23332 2222 25678999988 455555
Q ss_pred hhhhhcC-CCEEEEEcccc
Q 021928 176 NAGSLKG-VQHVILLSQLS 193 (305)
Q Consensus 176 ~~a~~~g-v~~~V~iSS~~ 193 (305)
+.+++.. .+++ ++|.+.
T Consensus 72 ~v~~~l~~~~~~-viS~~a 89 (152)
T d1yqga2 72 AACKNIRTNGAL-VLSVAA 89 (152)
T ss_dssp HHHTTCCCTTCE-EEECCT
T ss_pred HhHHHHhhcccE-Eeeccc
Confidence 5544422 2333 355443
|
| >d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Haemophilus influenzae [TaxId: 727]
Probab=97.06 E-value=0.00043 Score=53.80 Aligned_cols=55 Identities=13% Similarity=0.206 Sum_probs=44.6
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEEC
Q 021928 95 PEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 169 (305)
Q Consensus 95 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~ 169 (305)
+..+++|.|.||.|.+|+.+++.|.++||+|.+.+|++.... ...+.++|.++.+
T Consensus 6 ~~~~~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~~~~--------------------~~~~~~~~~v~~~ 60 (152)
T d2pv7a2 6 NSDIHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWAVA--------------------ESILANADVVIVS 60 (152)
T ss_dssp CTTCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGGGH--------------------HHHHTTCSEEEEC
T ss_pred CCCCCeEEEEcCCCHHHHHHHHHHHHcCCCcEeccccccccc--------------------chhhhhccccccc
Confidence 445789999999999999999999999999999998764322 2445677777766
|
| >d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YahK species: Escherichia coli [TaxId: 562]
Probab=97.02 E-value=0.00082 Score=53.06 Aligned_cols=92 Identities=13% Similarity=0.135 Sum_probs=62.5
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhh--hhcCCCcEEeecCCCCHHHHHHHhcCccEEEECCc--
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM--ESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE-- 171 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~--~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~-- 171 (305)
.++.+|+|.|+ |.+|...++.+...|.+++++++++++.. ..++. .. ..|..+.+......+++|++|.+.+
T Consensus 29 ~~G~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~~~~~~~~a~~lGa--d~-~i~~~~~~~~~~~~~~~D~vid~~g~~ 104 (168)
T d1uufa2 29 GPGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKALGA--DE-VVNSRNADEMAAHLKSFDFILNTVAAP 104 (168)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTC--SE-EEETTCHHHHHTTTTCEEEEEECCSSC
T ss_pred CCCCEEEEecc-chHHHHHHHHhhcccccchhhccchhHHHHHhccCC--cE-EEECchhhHHHHhcCCCceeeeeeecc
Confidence 35689999986 99999999888899999999998877643 22332 21 2467777777777789999997743
Q ss_pred chHhhhhhhcC-CCEEEEEcc
Q 021928 172 GFISNAGSLKG-VQHVILLSQ 191 (305)
Q Consensus 172 g~~~~~a~~~g-v~~~V~iSS 191 (305)
..+..+..... -.++++++.
T Consensus 105 ~~~~~~~~~l~~~G~iv~~G~ 125 (168)
T d1uufa2 105 HNLDDFTTLLKRDGTMTLVGA 125 (168)
T ss_dssp CCHHHHHTTEEEEEEEEECCC
T ss_pred hhHHHHHHHHhcCCEEEEecc
Confidence 22333322211 136776653
|
| >d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Salmonella typhimurium [TaxId: 90371]
Probab=96.99 E-value=0.00032 Score=55.26 Aligned_cols=64 Identities=11% Similarity=-0.004 Sum_probs=49.8
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEECC
Q 021928 99 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS 170 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~ 170 (305)
|+|.|.|- |.+|+.+++.|+++||+|++..|++++..+......... ++..++++++|.||.+.
T Consensus 1 MkIgiIGl-G~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~-------~~~~e~~~~~d~ii~~v 64 (161)
T d1vpda2 1 MKVGFIGL-GIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAETA-------STAKAIAEQCDVIITML 64 (161)
T ss_dssp CEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEEC-------SSHHHHHHHCSEEEECC
T ss_pred CEEEEEeh-hHHHHHHHHHHHHCCCeEEEEeCCcchhHHHHHhhhhhc-------ccHHHHHhCCCeEEEEc
Confidence 68999986 999999999999999999999999887655433333321 23456778899999873
|
| >d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]
Probab=96.97 E-value=0.0037 Score=48.99 Aligned_cols=93 Identities=15% Similarity=0.118 Sum_probs=58.3
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh--hcCCCcEEeecCC--CCHHHHHHHh-----cCccEEE
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME--SFGTYVESMAGDA--SNKKFLKTAL-----RGVRSII 167 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~--~~~~~v~~v~~D~--~d~~~~~~~~-----~~~d~Vi 167 (305)
++.+|+|+| +|.+|...++.+...|.+|+++++++++... .++.... +..|- .+...+.+.+ .++|+||
T Consensus 26 ~g~~vlV~G-~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~~~a~~~ga~~~-~~~~~~~~~~~~~~~~~~~~~g~g~D~vi 103 (170)
T d1e3ja2 26 LGTTVLVIG-AGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKNCGADVT-LVVDPAKEEESSIIERIRSAIGDLPNVTI 103 (170)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEE-EECCTTTSCHHHHHHHHHHHSSSCCSEEE
T ss_pred CCCEEEEEc-ccccchhhHhhHhhhcccccccchHHHHHHHHHHcCCcEE-EeccccccccchhhhhhhcccccCCceee
Confidence 458999997 5999999999999999999999999877432 2333222 22222 2333333333 3689999
Q ss_pred ECCcc--hHhhhhhhc-CCCEEEEEcc
Q 021928 168 CPSEG--FISNAGSLK-GVQHVILLSQ 191 (305)
Q Consensus 168 ~~~~g--~~~~~a~~~-gv~~~V~iSS 191 (305)
.+.++ .+..+.+.. .-.++++++.
T Consensus 104 d~~g~~~~~~~a~~~~~~~G~iv~~G~ 130 (170)
T d1e3ja2 104 DCSGNEKCITIGINITRTGGTLMLVGM 130 (170)
T ss_dssp ECSCCHHHHHHHHHHSCTTCEEEECSC
T ss_pred ecCCChHHHHHHHHHHhcCCceEEEec
Confidence 87543 233332221 2247877763
|
| >d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Cinnamyl alcohol dehydrogenase, ADH6 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=96.94 E-value=0.00041 Score=54.94 Aligned_cols=71 Identities=13% Similarity=0.102 Sum_probs=49.5
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh--hcCCCcEEeecCCCCHHHHHHHhcCccEEEEC
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME--SFGTYVESMAGDASNKKFLKTALRGVRSIICP 169 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~--~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~ 169 (305)
.++.+|+|+|+ |.+|...++.+...|.+|+++++++++... .++.. +++.. ..+.+..++..+++|.++.+
T Consensus 26 ~~g~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~~~~k~~~a~~lGa~-~~i~~-~~~~~~~~~~~~~~d~vi~~ 98 (168)
T d1piwa2 26 GPGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAMKMGAD-HYIAT-LEEGDWGEKYFDTFDLIVVC 98 (168)
T ss_dssp STTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCS-EEEEG-GGTSCHHHHSCSCEEEEEEC
T ss_pred CCCCEEEEECC-CCcchhHHHHhhhccccccccccchhHHHHhhccCCc-EEeec-cchHHHHHhhhcccceEEEE
Confidence 35689999997 999999988888899999999998876432 23321 22211 11224445666788999876
|
| >d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Conserved hypothetical protein MTH1747 species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]
Probab=96.93 E-value=0.00058 Score=53.10 Aligned_cols=65 Identities=8% Similarity=0.005 Sum_probs=46.9
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEECCc
Q 021928 99 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE 171 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~ 171 (305)
|+|.|.|. |.+|+.+++.|+++|++|+...|++++..........+. ++..++++.+|.||.+.+
T Consensus 1 MkIgiIG~-G~mG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~-------~~~~e~~~~~diIi~~v~ 65 (152)
T d1i36a2 1 LRVGFIGF-GEVAQTLASRLRSRGVEVVTSLEGRSPSTIERARTVGVT-------ETSEEDVYSCPVVISAVT 65 (152)
T ss_dssp CEEEEESC-SHHHHHHHHHHHHTTCEEEECCTTCCHHHHHHHHHHTCE-------ECCHHHHHTSSEEEECSC
T ss_pred CEEEEEcH-HHHHHHHHHHHHHCCCeEEEEcCchhHHHHHhhhccccc-------ccHHHHHhhcCeEEEEec
Confidence 68999986 999999999999999999998887765433222112211 123467889999998833
|
| >d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Glycerol-3- phosphate dehydrogenase species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=96.91 E-value=0.0011 Score=53.20 Aligned_cols=72 Identities=8% Similarity=0.045 Sum_probs=50.1
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcch--hhhhcC----C--CcEEeecCCCCHHHHHHHhcCccEEEECC
Q 021928 99 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN--AMESFG----T--YVESMAGDASNKKFLKTALRGVRSIICPS 170 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~--~~~~~~----~--~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~ 170 (305)
|+|.|.|| |..|.+++..|++.|++|.+..|..+. ...... . ....-..++.-.+++.++++++|.|+.+.
T Consensus 1 MkI~ViGa-G~~GtalA~~la~~g~~V~l~~r~~~~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ad~Ii~av 79 (180)
T d1txga2 1 MIVSILGA-GAMGSALSVPLVDNGNEVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLENAEVVLLGV 79 (180)
T ss_dssp CEEEEESC-CHHHHHHHHHHHHHCCEEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHTTCSEEEECS
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCEEEEEEecccHHHHHHHhhhhhhhhhcchhccccccccccHHHHHhccchhhccc
Confidence 78999998 999999999999999999999986433 111100 0 11111112222466788999999999884
Q ss_pred c
Q 021928 171 E 171 (305)
Q Consensus 171 ~ 171 (305)
+
T Consensus 80 p 80 (180)
T d1txga2 80 S 80 (180)
T ss_dssp C
T ss_pred c
Confidence 4
|
| >d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Pyrroline-5-carboxylate reductase ProC species: Streptococcus pyogenes [TaxId: 1314]
Probab=96.91 E-value=0.00053 Score=53.52 Aligned_cols=80 Identities=6% Similarity=-0.057 Sum_probs=55.6
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCC-CcEEeecCCCCHHHHHHHhcCccEEEEC-CcchHhh
Q 021928 99 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGT-YVESMAGDASNKKFLKTALRGVRSIICP-SEGFISN 176 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~-~v~~v~~D~~d~~~~~~~~~~~d~Vi~~-~~g~~~~ 176 (305)
|+|.+.|+ |.+|+++++.|++.|++|++..|++++..+.... ++.+. .+..++++.+|+||.+ .+....+
T Consensus 1 MkIg~IG~-G~mG~al~~~l~~~~~~i~v~~r~~~~~~~l~~~~g~~~~-------~~~~~~~~~~dvIilavkp~~~~~ 72 (152)
T d2ahra2 1 MKIGIIGV-GKMASAIIKGLKQTPHELIISGSSLERSKEIAEQLALPYA-------MSHQDLIDQVDLVILGIKPQLFET 72 (152)
T ss_dssp CEEEEECC-SHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHHTCCBC-------SSHHHHHHTCSEEEECSCGGGHHH
T ss_pred CEEEEEec-cHHHHHHHHHHHhCCCeEEEEcChHHhHHhhccccceeee-------chhhhhhhccceeeeecchHhHHH
Confidence 68999986 9999999999999999999999998764432211 12211 1345667899999988 5555555
Q ss_pred hhhhcCCCEE
Q 021928 177 AGSLKGVQHV 186 (305)
Q Consensus 177 ~a~~~gv~~~ 186 (305)
..+...-+++
T Consensus 73 vl~~l~~~~~ 82 (152)
T d2ahra2 73 VLKPLHFKQP 82 (152)
T ss_dssp HHTTSCCCSC
T ss_pred Hhhhccccee
Confidence 5554443444
|
| >d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: GDP-mannose 6-dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=96.90 E-value=0.0007 Score=55.32 Aligned_cols=70 Identities=7% Similarity=-0.093 Sum_probs=48.0
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCC-------------CCHHHHHHHhcCccE
Q 021928 99 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDA-------------SNKKFLKTALRGVRS 165 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~-------------~d~~~~~~~~~~~d~ 165 (305)
|+|.|.|. |++|..++..|+++|++|++++.++++....-.....+...++ .-..++.++++.+|+
T Consensus 1 MkI~ViGl-G~vGl~~a~~la~~g~~V~g~D~n~~~i~~ln~g~~p~~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~d~ 79 (202)
T d1mv8a2 1 MRISIFGL-GYVGAVCAGCLSARGHEVIGVDVSSTKIDLINQGKSPIVEPGLEALLQQGRQTGRLSGTTDFKKAVLDSDV 79 (202)
T ss_dssp CEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHHTCSE
T ss_pred CEEEEECC-CHhHHHHHHHHHhCCCcEEEEeCCHHHHHHhcccCCcccchhhhhhhhhhhcccccccCCCHHHHHhhCCE
Confidence 78999975 9999999999999999999999887664433221111111111 011234567788999
Q ss_pred EEEC
Q 021928 166 IICP 169 (305)
Q Consensus 166 Vi~~ 169 (305)
++.+
T Consensus 80 i~i~ 83 (202)
T d1mv8a2 80 SFIC 83 (202)
T ss_dssp EEEC
T ss_pred EEEe
Confidence 9977
|
| >d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC species: Salmonella typhimurium [TaxId: 90371]
Probab=96.87 E-value=0.00028 Score=56.80 Aligned_cols=32 Identities=16% Similarity=0.129 Sum_probs=27.4
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhC-CCeEEEEE
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVK-RTRIKALV 129 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~ 129 (305)
|++|.|.||||++|+++++.|.+. ..+|..+.
T Consensus 1 MikVaIiGATGyvG~eLlrlL~~HP~~ei~~l~ 33 (179)
T d2g17a1 1 MLNTLIVGASGYAGAELVSYVNRHPHMTITALT 33 (179)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHCTTEEEEEEE
T ss_pred CcEEEEECcccHHHHHHHHHHHhCCCCceEeeE
Confidence 589999999999999999999987 45776553
|
| >d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhfP species: Bacillus subtilis [TaxId: 1423]
Probab=96.75 E-value=0.00032 Score=55.85 Aligned_cols=93 Identities=14% Similarity=0.067 Sum_probs=56.6
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHh-----cCccEEEECCcc
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTAL-----RGVRSIICPSEG 172 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~-----~~~d~Vi~~~~g 172 (305)
..+|||+||+|++|...++.....|++|+++++++++......-+.+.+ .|.. +...+.+ +++|.|+.+.++
T Consensus 24 ~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~~~~~lGad~v-i~~~--~~~~~~~~~~~~~gvd~vid~vgg 100 (167)
T d1tt7a2 24 KGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQLGASEV-ISRE--DVYDGTLKALSKQQWQGAVDPVGG 100 (167)
T ss_dssp GCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHHHHTCSEE-EEHH--HHCSSCCCSSCCCCEEEEEESCCT
T ss_pred CCEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHHHHHHhhcccce-Eecc--chhchhhhcccCCCceEEEecCcH
Confidence 4579999999999999998888899999999999877443221112222 1211 1111111 367999977544
Q ss_pred h-Hhhhhhhc-CCCEEEEEcccc
Q 021928 173 F-ISNAGSLK-GVQHVILLSQLS 193 (305)
Q Consensus 173 ~-~~~~a~~~-gv~~~V~iSS~~ 193 (305)
. +....+.. .-.++|.+...+
T Consensus 101 ~~~~~~~~~l~~~G~iv~~G~~~ 123 (167)
T d1tt7a2 101 KQLASLLSKIQYGGSVAVSGLTG 123 (167)
T ss_dssp HHHHHHHTTEEEEEEEEECCCSS
T ss_pred HHHHHHHHHhccCceEEEeeccC
Confidence 3 33332221 123677665544
|
| >d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Escherichia coli [TaxId: 562]
Probab=96.74 E-value=0.0011 Score=52.56 Aligned_cols=69 Identities=14% Similarity=0.076 Sum_probs=48.3
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh---cCCCcEEeecCCCCHHHHHHHhcCccEEEECC
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALRGVRSIICPS 170 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~ 170 (305)
..+++|+|.|| |+.+++++..|.+.|.+|+++.|+.+++.+. +.........++.+ .....+|.||+++
T Consensus 16 ~~~k~vlIlGa-GGaarai~~al~~~g~~i~I~nRt~~ka~~l~~~~~~~~~~~~~~~~~-----~~~~~~dliIN~T 87 (170)
T d1nyta1 16 RPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQALSMDE-----LEGHEFDLIINAT 87 (170)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSEEECCSGG-----GTTCCCSEEEECC
T ss_pred CCCCEEEEECC-cHHHHHHHHHhcccceEEEeccchHHHHHHHHHHHhhccccccccccc-----ccccccceeeccc
Confidence 35699999997 9999999999999999999999998775432 22211222223322 1235689999883
|
| >d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=96.72 E-value=0.002 Score=50.03 Aligned_cols=65 Identities=17% Similarity=0.225 Sum_probs=46.6
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCC--eEEEEEcCcchhhh----h-----c-CCCcEEeecCCCCHHHHHHHhcCcc
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRT--RIKALVKDKRNAME----S-----F-GTYVESMAGDASNKKFLKTALRGVR 164 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~R~~~~~~~----~-----~-~~~v~~v~~D~~d~~~~~~~~~~~d 164 (305)
.+++|.|+|| |.+|+.++..|+.+|. +++++++++++... . + ...+.+...|. +.++++|
T Consensus 5 ~~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~d~-------~~l~daD 76 (148)
T d1ldna1 5 GGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDY-------DDCRDAD 76 (148)
T ss_dssp TSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCG-------GGTTTCS
T ss_pred CCCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCccccCCCeEEEECCH-------HHhccce
Confidence 4579999997 9999999999999884 79999888765211 1 1 12344444443 4588899
Q ss_pred EEEEC
Q 021928 165 SIICP 169 (305)
Q Consensus 165 ~Vi~~ 169 (305)
.||.+
T Consensus 77 vvvit 81 (148)
T d1ldna1 77 LVVIC 81 (148)
T ss_dssp EEEEC
T ss_pred eEEEe
Confidence 99877
|
| >d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: CoaB-like family: CoaB-like domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) species: Escherichia coli [TaxId: 562]
Probab=96.71 E-value=0.0029 Score=52.50 Aligned_cols=71 Identities=7% Similarity=0.082 Sum_probs=50.3
Q ss_pred CCCCEEEEEcC----------------CChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCC--HHHHH
Q 021928 96 EARDAVLVTDG----------------DSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASN--KKFLK 157 (305)
Q Consensus 96 ~~~~~vlVtGa----------------tG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d--~~~~~ 157 (305)
..+++||||+| ||..|.+|++.+..+|++|.++.-.... ..+.++.++...-.+ .+.+.
T Consensus 4 l~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~V~li~g~~~~---~~p~~~~~~~~~t~~~m~~~~~ 80 (223)
T d1u7za_ 4 LKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSL---PTPPFVKRVDVMTALEMEAAVN 80 (223)
T ss_dssp TTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCC---CCCTTEEEEECCSHHHHHHHHH
T ss_pred cCCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCchhhhhccccc---CcccccccceehhhHHHHHHHH
Confidence 34688888876 8999999999999999999998765432 123455555432211 23445
Q ss_pred HHhcCccEEEEC
Q 021928 158 TALRGVRSIICP 169 (305)
Q Consensus 158 ~~~~~~d~Vi~~ 169 (305)
+.+..+|++|++
T Consensus 81 ~~~~~~D~~i~a 92 (223)
T d1u7za_ 81 ASVQQQNIFIGC 92 (223)
T ss_dssp HHGGGCSEEEEC
T ss_pred hhhccceeEeee
Confidence 566789999987
|
| >d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=96.70 E-value=0.0012 Score=51.95 Aligned_cols=64 Identities=8% Similarity=0.062 Sum_probs=48.8
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEEC
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 169 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~ 169 (305)
|++|.|.|- |.+|+.++++|+++||+|.+..|++++........... ..+..+++..+|.|+.+
T Consensus 1 M~kIg~IGl-G~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~-------~~~~~e~~~~~diii~~ 64 (162)
T d3cuma2 1 MKQIAFIGL-GHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASA-------ARSARDAVQGADVVISM 64 (162)
T ss_dssp CCEEEEECC-STTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEE-------CSSHHHHHTSCSEEEEC
T ss_pred CCEEEEEEE-HHHHHHHHHHHHHCCCeEEEEECchhhhhhhhhhhccc-------cchhhhhccccCeeeec
Confidence 578999985 99999999999999999999999987754433221211 12355778889999877
|
| >d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative zinc-binding alcohol dehydrogenase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.64 E-value=0.00056 Score=55.19 Aligned_cols=96 Identities=18% Similarity=0.157 Sum_probs=54.5
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEE-EEEcCcchhhhh---cCCCcEEeecCCCC---HHHHHHHh-cCccEEEE
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIK-ALVKDKRNAMES---FGTYVESMAGDASN---KKFLKTAL-RGVRSIIC 168 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~-~~~R~~~~~~~~---~~~~v~~v~~D~~d---~~~~~~~~-~~~d~Vi~ 168 (305)
...+|||+||+|.+|+..++.....|.+++ .+++++++.... .+. .. ..|..+ .+.++++. +++|+||.
T Consensus 30 ~~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~ga-d~--vi~~~~~~~~~~~~~~~~~GvDvv~D 106 (187)
T d1vj1a2 30 SNQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSELGF-DA--AVNYKTGNVAEQLREACPGGVDVYFD 106 (187)
T ss_dssp SCCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHSCC-SE--EEETTSSCHHHHHHHHCTTCEEEEEE
T ss_pred CCCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcccc-eE--EeeccchhHHHHHHHHhccCceEEEe
Confidence 347999999999999999998888997654 455555553322 232 22 234443 23344433 46999998
Q ss_pred CCcchH-hhhhhh-cCCCEEEEEcccccc
Q 021928 169 PSEGFI-SNAGSL-KGVQHVILLSQLSVY 195 (305)
Q Consensus 169 ~~~g~~-~~~a~~-~gv~~~V~iSS~~~~ 195 (305)
+.++.. ...++. ..-.++|.+..++.+
T Consensus 107 ~vGg~~~~~~~~~l~~~G~iv~~G~~s~~ 135 (187)
T d1vj1a2 107 NVGGDISNTVISQMNENSHIILCGQISQY 135 (187)
T ss_dssp SSCHHHHHHHHTTEEEEEEEEEC------
T ss_pred cCCchhHHHHhhhccccccEEEecccccc
Confidence 865542 222222 122478877655444
|
| >d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein TM0436 species: Thermotoga maritima [TaxId: 2336]
Probab=96.61 E-value=0.003 Score=50.21 Aligned_cols=90 Identities=8% Similarity=0.063 Sum_probs=55.3
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcchhhh--hcCCCcEEeecCCCCHHH----HHHHh--cCccEEE
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAME--SFGTYVESMAGDASNKKF----LKTAL--RGVRSII 167 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~--~~~~~v~~v~~D~~d~~~----~~~~~--~~~d~Vi 167 (305)
++.+|||+|| |.||...++.+...|+ +|+++.+++++... .++. -.++...=.+... +.+.. .++|+||
T Consensus 28 ~G~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a~~lGa-~~vi~~~~~~~~~~~~~i~~~~~~~g~Dvvi 105 (182)
T d1vj0a2 28 AGKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGA-DLTLNRRETSVEERRKAIMDITHGRGADFIL 105 (182)
T ss_dssp BTCEEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHTTC-SEEEETTTSCHHHHHHHHHHHTTTSCEEEEE
T ss_pred CCCEEEEECC-Cccchhheecccccccccccccccccccccccccccc-eEEEeccccchHHHHHHHHHhhCCCCceEEe
Confidence 4689999997 9999999999999997 79999998876432 2332 1222221122222 22222 2589999
Q ss_pred ECCcc--hHhhh---hhhcCCCEEEEEc
Q 021928 168 CPSEG--FISNA---GSLKGVQHVILLS 190 (305)
Q Consensus 168 ~~~~g--~~~~~---a~~~gv~~~V~iS 190 (305)
.+.++ .+..+ ++.. .++|++.
T Consensus 106 d~vG~~~~~~~a~~~l~~~--G~iv~~G 131 (182)
T d1vj0a2 106 EATGDSRALLEGSELLRRG--GFYSVAG 131 (182)
T ss_dssp ECSSCTTHHHHHHHHEEEE--EEEEECC
T ss_pred ecCCchhHHHHHHHHhcCC--CEEEEEe
Confidence 77443 23333 2333 3677665
|
| >d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Glycerol-3- phosphate dehydrogenase species: Trypanosome (Leishmania mexicana) [TaxId: 5665]
Probab=96.59 E-value=0.00047 Score=55.96 Aligned_cols=74 Identities=14% Similarity=0.092 Sum_probs=52.0
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh--------cCCCcEEeecCCCCHHHHHHHhcCccEEEE
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES--------FGTYVESMAGDASNKKFLKTALRGVRSIIC 168 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~--------~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~ 168 (305)
.|++|.|.|| |.-|.+++..|.+.|++|.+..|+++...+. +-++++. .-++.-..++.++++++|.||.
T Consensus 6 ~m~KI~ViGa-G~wGtAlA~~La~~g~~V~l~~r~~~~~~~i~~~~~n~~yl~~~~l-~~~i~~t~~l~~a~~~ad~iii 83 (189)
T d1n1ea2 6 YLNKAVVFGS-GAFGTALAMVLSKKCREVCVWHMNEEEVRLVNEKRENVLFLKGVQL-ASNITFTSDVEKAYNGAEIILF 83 (189)
T ss_dssp CEEEEEEECC-SHHHHHHHHHHHTTEEEEEEECSCHHHHHHHHHHTBCTTTSTTCBC-CTTEEEESCHHHHHTTCSCEEE
T ss_pred eeceEEEECC-CHHHHHHHHHHHHcCCeEEEEEecHHHHHHHhhccccccccccccc-ccccccchhhhhccCCCCEEEE
Confidence 3568999998 9999999999999999999999987653221 1111211 1112112346788999999999
Q ss_pred CCcc
Q 021928 169 PSEG 172 (305)
Q Consensus 169 ~~~g 172 (305)
+.+.
T Consensus 84 avPs 87 (189)
T d1n1ea2 84 VIPT 87 (189)
T ss_dssp CSCH
T ss_pred cCcH
Confidence 8553
|
| >d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]
Probab=96.56 E-value=0.0048 Score=48.45 Aligned_cols=69 Identities=10% Similarity=0.090 Sum_probs=47.1
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCC--eEEEEEcCcchhhh----h-----c-CCCcEEeecCCCCHHHHHHHhcC
Q 021928 95 PEARDAVLVTDGDSDIGQMVILSLIVKRT--RIKALVKDKRNAME----S-----F-GTYVESMAGDASNKKFLKTALRG 162 (305)
Q Consensus 95 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~R~~~~~~~----~-----~-~~~v~~v~~D~~d~~~~~~~~~~ 162 (305)
..++++|.|.|+ |.+|+.++..|+.+|. ++++++++++.+.. . + ........+|+ +.+++
T Consensus 17 ~~~~~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~~~~~~~~~~~~d~-------~~~~~ 88 (160)
T d1i0za1 17 TVPNNKITVVGV-GQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPKIVADKDY-------SVTAN 88 (160)
T ss_dssp CCCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCCCSEEEECSSG-------GGGTT
T ss_pred cCCCCeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhccccccCCCeEEeccch-------hhccc
Confidence 345689999997 9999999999999995 89999888655311 1 1 11222222332 33788
Q ss_pred ccEEEECCc
Q 021928 163 VRSIICPSE 171 (305)
Q Consensus 163 ~d~Vi~~~~ 171 (305)
+|+|+++++
T Consensus 89 adiVVitAg 97 (160)
T d1i0za1 89 SKIVVVTAG 97 (160)
T ss_dssp CSEEEECCS
T ss_pred ccEEEEecC
Confidence 898888743
|
| >d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH species: Lactobacillus confusus [TaxId: 1583]
Probab=96.55 E-value=0.0028 Score=49.08 Aligned_cols=64 Identities=13% Similarity=0.123 Sum_probs=44.1
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCC--CeEEEEEcCcchhhh----------hcCCCcEEeecCCCCHHHHHHHhcCccEE
Q 021928 99 DAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRNAME----------SFGTYVESMAGDASNKKFLKTALRGVRSI 166 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~~~g--~~V~~~~R~~~~~~~----------~~~~~v~~v~~D~~d~~~~~~~~~~~d~V 166 (305)
|+|.|+|+ |.+|+.++..|+.+| .+++++++++++... ...........|. +.++++|+|
T Consensus 2 kKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~~~d~-------~~l~~adiV 73 (146)
T d1hyha1 2 RKIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVINDW-------AALADADVV 73 (146)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESCG-------GGGTTCSEE
T ss_pred CeEEEECc-CHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccccCCccceeccCH-------HHhccccEE
Confidence 78999996 999999999999888 488888888765211 1112233333332 346788888
Q ss_pred EECC
Q 021928 167 ICPS 170 (305)
Q Consensus 167 i~~~ 170 (305)
|.++
T Consensus 74 Vita 77 (146)
T d1hyha1 74 ISTL 77 (146)
T ss_dssp EECC
T ss_pred EEec
Confidence 8763
|
| >d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.54 E-value=0.014 Score=45.66 Aligned_cols=93 Identities=11% Similarity=0.033 Sum_probs=59.4
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcchhhh--hcCCCcEEeecCCCCHHHHHHHh-----cCccEEEE
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAME--SFGTYVESMAGDASNKKFLKTAL-----RGVRSIIC 168 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~--~~~~~v~~v~~D~~d~~~~~~~~-----~~~d~Vi~ 168 (305)
++.+|+|.|+ |.+|...+..+...|. +|+++.+++.+... .++. -.++..+-.+.....+.+ .++|+||.
T Consensus 26 ~gd~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a~~~Ga-~~~~~~~~~~~~~~~~~~~~~~g~g~Dvvid 103 (171)
T d1pl8a2 26 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGA-DLVLQISKESPQEIARKVEGQLGCKPEVTIE 103 (171)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTC-SEEEECSSCCHHHHHHHHHHHHTSCCSEEEE
T ss_pred CCCEEEEECC-CccHHHHHHHHHHcCCceEEeccCCHHHHHHHHHhCC-cccccccccccccccccccccCCCCceEEEe
Confidence 4579999987 9999999999999998 79999998877432 2332 133333444544444433 36899998
Q ss_pred CCcch--Hhhhhhhc-CCCEEEEEcc
Q 021928 169 PSEGF--ISNAGSLK-GVQHVILLSQ 191 (305)
Q Consensus 169 ~~~g~--~~~~a~~~-gv~~~V~iSS 191 (305)
+.+.. +..+.+.. .-.++++++.
T Consensus 104 ~~G~~~~~~~a~~~~~~gG~iv~~G~ 129 (171)
T d1pl8a2 104 CTGAEASIQAGIYATRSGGTLVLVGL 129 (171)
T ss_dssp CSCCHHHHHHHHHHSCTTCEEEECSC
T ss_pred ccCCchhHHHHHHHhcCCCEEEEEec
Confidence 85532 33332221 2247877763
|
| >d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Clostridium thermocellum [TaxId: 1515]
Probab=96.48 E-value=0.006 Score=46.82 Aligned_cols=65 Identities=15% Similarity=0.238 Sum_probs=43.3
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCC--eEEEEEcCcchhh----hhc-----CCCcEEeecCCCCHHHHHHHhcCccEE
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRT--RIKALVKDKRNAM----ESF-----GTYVESMAGDASNKKFLKTALRGVRSI 166 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~R~~~~~~----~~~-----~~~v~~v~~D~~d~~~~~~~~~~~d~V 166 (305)
+++|.|+|| |.+|+.++..|+.++. +++++++++++.. +.. ........+| .+.++++|+|
T Consensus 1 r~KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~-------~~~~~~adiv 72 (142)
T d1y6ja1 1 RSKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAGD-------YSDVKDCDVI 72 (142)
T ss_dssp CCCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC--C-------GGGGTTCSEE
T ss_pred CCeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCcccCCCeeEeeCc-------HHHhCCCceE
Confidence 368999997 9999999999999884 8999998876521 111 1222322222 3468999999
Q ss_pred EECC
Q 021928 167 ICPS 170 (305)
Q Consensus 167 i~~~ 170 (305)
+.++
T Consensus 73 vita 76 (142)
T d1y6ja1 73 VVTA 76 (142)
T ss_dssp EECC
T ss_pred EEec
Confidence 9873
|
| >d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=96.40 E-value=0.0036 Score=48.34 Aligned_cols=68 Identities=15% Similarity=0.166 Sum_probs=43.0
Q ss_pred CEEEEEcCCChHHHHHHHHHHh-CC--CeEEEEEcCcchh---hhhcC----CCcEEeecCCCCHHHHHHHhcCccEEEE
Q 021928 99 DAVLVTDGDSDIGQMVILSLIV-KR--TRIKALVKDKRNA---MESFG----TYVESMAGDASNKKFLKTALRGVRSIIC 168 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~~-~g--~~V~~~~R~~~~~---~~~~~----~~v~~v~~D~~d~~~~~~~~~~~d~Vi~ 168 (305)
|+|.|+||+|.+|+.++..|.. .+ .++.+++..+... .+... .....+ ..-.+ .++++++|+||.
T Consensus 1 MKV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~~~~g~a~Dl~h~~~~~~~~~~-~~~~~----~~~~~~aDvvvi 75 (145)
T d2cmda1 1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGF-SGEDA----TPALEGADVVLI 75 (145)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSSTTHHHHHHHHHTSCSSCEEEEE-CSSCC----HHHHTTCSEEEE
T ss_pred CEEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccccchhHHHHHHCCccccCCcEE-EcCCC----ccccCCCCEEEE
Confidence 7899999999999999988764 34 6888887654221 11111 112221 12223 346889999998
Q ss_pred CCc
Q 021928 169 PSE 171 (305)
Q Consensus 169 ~~~ 171 (305)
+++
T Consensus 76 taG 78 (145)
T d2cmda1 76 SAG 78 (145)
T ss_dssp CCS
T ss_pred CCC
Confidence 843
|
| >d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=96.40 E-value=0.0077 Score=46.01 Aligned_cols=64 Identities=20% Similarity=0.307 Sum_probs=45.7
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCC--CeEEEEEcCcchhhh---------hcCCCcEEeecCCCCHHHHHHHhcCccEEE
Q 021928 99 DAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRNAME---------SFGTYVESMAGDASNKKFLKTALRGVRSII 167 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~~~g--~~V~~~~R~~~~~~~---------~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi 167 (305)
|+|.|.|| |.+|+.++..|+.++ .+++++++++++... .+.........|. +.++++|+|+
T Consensus 1 mKI~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~~~~~-------~~~~~adivv 72 (140)
T d1a5za1 1 MKIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGDY-------ADLKGSDVVI 72 (140)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECCG-------GGGTTCSEEE
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEecccccccchhccccccccccccccccCCcH-------HHhcCCCEEE
Confidence 68999997 999999999999887 489988888755221 1222344444332 3488999999
Q ss_pred ECC
Q 021928 168 CPS 170 (305)
Q Consensus 168 ~~~ 170 (305)
.++
T Consensus 73 ita 75 (140)
T d1a5za1 73 VAA 75 (140)
T ss_dssp ECC
T ss_pred Eec
Confidence 873
|
| >d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Archaeon Haloarcula marismortui [TaxId: 2238]
Probab=96.38 E-value=0.0056 Score=47.05 Aligned_cols=65 Identities=8% Similarity=0.176 Sum_probs=44.1
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCC--eEEEEEcCc--chh----hhh-----cCCCcEEeecCCCCHHHHHHHhcCccE
Q 021928 99 DAVLVTDGDSDIGQMVILSLIVKRT--RIKALVKDK--RNA----MES-----FGTYVESMAGDASNKKFLKTALRGVRS 165 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~R~~--~~~----~~~-----~~~~v~~v~~D~~d~~~~~~~~~~~d~ 165 (305)
.+|.|+||+|.+|+.++..|+.++. ++++++.+. +.. .+. +....++..+|.. .++++|+
T Consensus 1 sKV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~~~~~~~i~~~~~~-------~~~~aDi 73 (142)
T d1o6za1 1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGGYE-------DTAGSDV 73 (142)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECCGG-------GGTTCSE
T ss_pred CeEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhcccccCCceEeeCCHH-------HhhhcCE
Confidence 3799999999999999999999984 677777432 221 111 2334454444432 3678999
Q ss_pred EEECC
Q 021928 166 IICPS 170 (305)
Q Consensus 166 Vi~~~ 170 (305)
|+.++
T Consensus 74 Vvita 78 (142)
T d1o6za1 74 VVITA 78 (142)
T ss_dssp EEECC
T ss_pred EEEec
Confidence 98773
|
| >d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Chlorobium vibrioforme [TaxId: 1098]
Probab=96.35 E-value=0.0074 Score=46.15 Aligned_cols=65 Identities=9% Similarity=0.011 Sum_probs=45.1
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCC--CeEEEEEcCcchhhh----------hcCCCcEEeecCCCCHHHHHHHhcCccEE
Q 021928 99 DAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRNAME----------SFGTYVESMAGDASNKKFLKTALRGVRSI 166 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~~~g--~~V~~~~R~~~~~~~----------~~~~~v~~v~~D~~d~~~~~~~~~~~d~V 166 (305)
|+|.|+|| |.+|+.++..|+..+ .++.++++++++... ......++... .| .++++++|+|
T Consensus 1 mKI~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~~--~~----~~~~~dadvv 73 (142)
T d1guza1 1 MKITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGS--ND----YADTANSDIV 73 (142)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEE--SC----GGGGTTCSEE
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhcccchhcccceEEec--CC----HHHhcCCeEE
Confidence 68999997 999999999999988 489999888765211 11223333322 12 2457899999
Q ss_pred EECC
Q 021928 167 ICPS 170 (305)
Q Consensus 167 i~~~ 170 (305)
+.++
T Consensus 74 vita 77 (142)
T d1guza1 74 IITA 77 (142)
T ss_dssp EECC
T ss_pred EEEE
Confidence 8773
|
| >d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=96.33 E-value=0.0024 Score=49.81 Aligned_cols=26 Identities=23% Similarity=0.296 Sum_probs=23.5
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCC
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKR 122 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g 122 (305)
++++|.|+||+|++|++++..|+..+
T Consensus 3 ~p~KV~IiGA~G~VG~~~a~~l~~~~ 28 (154)
T d1y7ta1 3 APVRVAVTGAAGQIGYSLLFRIAAGE 28 (154)
T ss_dssp CCEEEEESSTTSHHHHHHHHHHHTTT
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhcc
Confidence 35899999999999999999999765
|
| >d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=96.31 E-value=0.0016 Score=52.03 Aligned_cols=96 Identities=8% Similarity=-0.056 Sum_probs=58.1
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhc--CccEEEECCcch-H
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--GVRSIICPSEGF-I 174 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~--~~d~Vi~~~~g~-~ 174 (305)
..+|||+||+|++|...++.....|++|++++|++++.......+.+.+. |..+.+ ..+.+. ..|.+|.+.++. +
T Consensus 32 ~~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~~~~~~lGad~vi-~~~~~~-~~~~l~~~~~~~vvD~Vgg~~~ 109 (177)
T d1o89a2 32 DGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYLKSLGASRVL-PRDEFA-ESRPLEKQVWAGAIDTVGDKVL 109 (177)
T ss_dssp GCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHHHTEEEEE-EGGGSS-SCCSSCCCCEEEEEESSCHHHH
T ss_pred CCcEEEEEccccchHHHHHHHHHcCCCeEEEecchhHHHHHHhhcccccc-ccccHH-HHHHHHhhcCCeeEEEcchHHH
Confidence 35899999999999999999999999999999998875432221223221 222211 112222 247888774443 2
Q ss_pred hhhhhhc-CCCEEEEEcccccc
Q 021928 175 SNAGSLK-GVQHVILLSQLSVY 195 (305)
Q Consensus 175 ~~~a~~~-gv~~~V~iSS~~~~ 195 (305)
....+.. .-.++|.++.....
T Consensus 110 ~~~l~~l~~~Griv~~G~~~~~ 131 (177)
T d1o89a2 110 AKVLAQMNYGGCVAACGLAGGF 131 (177)
T ss_dssp HHHHHTEEEEEEEEECCCTTCS
T ss_pred HHHHHHhccccceEeecccCCc
Confidence 2222221 12378877665443
|
| >d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=96.28 E-value=0.0093 Score=46.39 Aligned_cols=71 Identities=8% Similarity=0.163 Sum_probs=47.5
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh--hcCCCcEEeecCCCC-HHHHHHHhcCccEEEEC
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME--SFGTYVESMAGDASN-KKFLKTALRGVRSIICP 169 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~--~~~~~v~~v~~D~~d-~~~~~~~~~~~d~Vi~~ 169 (305)
++.+|+|.|+ |.+|...++.+...|++|+++++++++... .++. .+++..+-.| .+.+.+...+.+.+|.+
T Consensus 27 ~g~~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~~~~~~~~a~~~Ga-~~~i~~~~~~~~~~~~~~~~g~~~~i~~ 100 (166)
T d1llua2 27 PGQWVAISGI-GGLGHVAVQYARAMGLHVAAIDIDDAKLELARKLGA-SLTVNARQEDPVEAIQRDIGGAHGVLVT 100 (166)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTC-SEEEETTTSCHHHHHHHHHSSEEEEEEC
T ss_pred CCCEEEEeec-cccHHHHHHHHHHcCCccceecchhhHHHhhhccCc-cccccccchhHHHHHHHhhcCCcccccc
Confidence 4689999987 999999999888999999999999876432 2332 2333222222 34455555666655544
|
| >d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Chloroflexus aurantiacus [TaxId: 1108]
Probab=96.27 E-value=0.011 Score=45.22 Aligned_cols=66 Identities=15% Similarity=0.058 Sum_probs=45.1
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcchhhh----h------cCCCcEEe-ecCCCCHHHHHHHhcCccE
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAME----S------FGTYVESM-AGDASNKKFLKTALRGVRS 165 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~----~------~~~~v~~v-~~D~~d~~~~~~~~~~~d~ 165 (305)
+++|.|+|+ |.+|+.++..|+.++. ++++++.+++.... . .+....+. ..|+ +.+.++|+
T Consensus 1 r~KI~IIGa-G~VG~~~A~~l~~~~l~dl~l~D~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~d~-------~~~~~adv 72 (142)
T d1uxja1 1 RKKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNY-------ADTANSDV 72 (142)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCG-------GGGTTCSE
T ss_pred CCeEEEECC-CHHHHHHHHHHHhCCcceEEEEeeccccchhHHHHhhccccccCCCCEEEecCcH-------HHhcCCCE
Confidence 479999997 9999999999998874 88888877765221 1 12223332 2233 23789999
Q ss_pred EEECCc
Q 021928 166 IICPSE 171 (305)
Q Consensus 166 Vi~~~~ 171 (305)
||.+++
T Consensus 73 vvitag 78 (142)
T d1uxja1 73 IVVTSG 78 (142)
T ss_dssp EEECCS
T ss_pred EEEeee
Confidence 998843
|
| >d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]
Probab=96.27 E-value=0.0061 Score=48.51 Aligned_cols=25 Identities=12% Similarity=0.139 Sum_probs=22.2
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhC
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVK 121 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~ 121 (305)
++-+|.|+||+|.||+.++..|+..
T Consensus 23 ~~~kV~I~GA~G~Ig~~l~~~La~g 47 (175)
T d7mdha1 23 KLVNIAVSGAAGMISNHLLFKLASG 47 (175)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHT
T ss_pred CCcEEEEECCCcHHHHHHHHHHHcC
Confidence 3468999999999999999999874
|
| >d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Aquifex aeolicus [TaxId: 63363]
Probab=96.22 E-value=0.0037 Score=48.97 Aligned_cols=68 Identities=12% Similarity=0.018 Sum_probs=45.6
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCC--eEEEEEcCcchhhhhcCCC-cEEeecCCCCHHHHHHHhcCccEEEECCc
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRT--RIKALVKDKRNAMESFGTY-VESMAGDASNKKFLKTALRGVRSIICPSE 171 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~R~~~~~~~~~~~~-v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~ 171 (305)
|++|+|.|. |.+|..+++.|.+.|+ +|++.+|+++........+ +.....+.. ......+|.|+++.+
T Consensus 1 Mk~I~IIG~-G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~~~~~~~~~~~~~~-----~~~~~~~dlIila~p 71 (171)
T d2g5ca2 1 MQNVLIVGV-GFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIA-----KVEDFSPDFVMLSSP 71 (171)
T ss_dssp CCEEEEESC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCGG-----GGGGTCCSEEEECSC
T ss_pred CCEEEEEcc-CHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHHHhhcchhhhhhhh-----hhhccccccccccCC
Confidence 478999986 9999999999999996 7888888876644332221 111111111 123447899998855
|
| >d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]
Probab=96.19 E-value=0.015 Score=44.53 Aligned_cols=66 Identities=12% Similarity=0.111 Sum_probs=45.7
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCC--eEEEEEcCcchhhh---------hcCCCcEEeecCCCCHHHHHHHhcCccEEE
Q 021928 99 DAVLVTDGDSDIGQMVILSLIVKRT--RIKALVKDKRNAME---------SFGTYVESMAGDASNKKFLKTALRGVRSII 167 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~R~~~~~~~---------~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi 167 (305)
.+|.|+|+ |.+|+.++..|+.+|. +++++++++++... .+.....+... .+ .+.++++|+||
T Consensus 2 ~Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a~~~~~~~~i~~~--~~----~~~~~daDvVV 74 (143)
T d1llda1 2 TKLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGS--DD----PEICRDADMVV 74 (143)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEE--SC----GGGGTTCSEEE
T ss_pred CEEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhccccCCCceeecC--CC----HHHhhCCcEEE
Confidence 68999997 9999999999999985 89999988765321 12222233222 12 23488999999
Q ss_pred ECCc
Q 021928 168 CPSE 171 (305)
Q Consensus 168 ~~~~ 171 (305)
.+++
T Consensus 75 itaG 78 (143)
T d1llda1 75 ITAG 78 (143)
T ss_dssp ECCC
T ss_pred Eecc
Confidence 8843
|
| >d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=96.18 E-value=0.011 Score=45.22 Aligned_cols=64 Identities=14% Similarity=0.239 Sum_probs=45.4
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCC--CeEEEEEcCcchhhh----------hcCCCcEEeec-CCCCHHHHHHHhcCccE
Q 021928 99 DAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRNAME----------SFGTYVESMAG-DASNKKFLKTALRGVRS 165 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~~~g--~~V~~~~R~~~~~~~----------~~~~~v~~v~~-D~~d~~~~~~~~~~~d~ 165 (305)
|+|.|.|| |.+|+.++..|+.+| .++++++++++.... .++...++... |+ +.++++|+
T Consensus 1 MKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~~~~~~~~~~~i~~~~d~-------~~~~~adi 72 (142)
T d1ojua1 1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGADY-------SLLKGSEI 72 (142)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESCG-------GGGTTCSE
T ss_pred CEEEEECc-CHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhhhccccCCCCccccCCCH-------HHhccccE
Confidence 78999997 999999999999888 479999888765221 12222333322 32 35889999
Q ss_pred EEECC
Q 021928 166 IICPS 170 (305)
Q Consensus 166 Vi~~~ 170 (305)
|+.++
T Consensus 73 Vvita 77 (142)
T d1ojua1 73 IVVTA 77 (142)
T ss_dssp EEECC
T ss_pred EEEec
Confidence 99884
|
| >d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: L-alanine dehydrogenase species: Phormidium lapideum [TaxId: 32060]
Probab=96.16 E-value=0.0032 Score=49.76 Aligned_cols=70 Identities=17% Similarity=0.174 Sum_probs=57.0
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh---hcCCCcEEeecCCCCHHHHHHHhcCccEEEEC
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALRGVRSIICP 169 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~---~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~ 169 (305)
.++.+|+|.|| |-.|..-++.....|.+|.+++.+++...+ .++..+++. ..+.+.+.+.++.+|.||.+
T Consensus 30 v~pa~V~ViGa-GvaG~~A~~~A~~lGA~V~~~D~~~~~l~~l~~~~~~~~~~~---~~~~~~l~~~~~~aDivI~a 102 (168)
T d1pjca1 30 VKPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSRVELL---YSNSAEIETAVAEADLLIGA 102 (168)
T ss_dssp BCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGSEEE---ECCHHHHHHHHHTCSEEEEC
T ss_pred CCCcEEEEECC-ChHHHHHHHHHhhCCCEEEEEeCcHHHHHHHHHhhcccceee---hhhhhhHHHhhccCcEEEEe
Confidence 35689999998 999999999999999999999999876433 233344443 45778899999999999977
|
| >d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=96.15 E-value=0.005 Score=45.31 Aligned_cols=39 Identities=18% Similarity=0.170 Sum_probs=34.7
Q ss_pred CcCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcc
Q 021928 94 FPEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR 133 (305)
Q Consensus 94 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~ 133 (305)
+...+++++|.|| |++|-+++..|.+.|.+|.++.|.+.
T Consensus 18 ~~~~p~~v~IiGg-G~ig~E~A~~l~~~G~~Vtlve~~~~ 56 (117)
T d1ebda2 18 LGEVPKSLVVIGG-GYIGIELGTAYANFGTKVTILEGAGE 56 (117)
T ss_dssp CSSCCSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred hhhcCCeEEEECC-CccceeeeeeecccccEEEEEEecce
Confidence 3455699999998 99999999999999999999998763
|
| >d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase-like protein HI0607 species: Haemophilus influenzae [TaxId: 727]
Probab=96.15 E-value=0.0033 Score=49.58 Aligned_cols=40 Identities=10% Similarity=0.214 Sum_probs=34.8
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcchhhh
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAME 137 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~ 137 (305)
+.++|+|.|+ |+.+++++..|.+.|. +|.++.|+.++...
T Consensus 16 ~~~~vlIlGa-GGaarai~~aL~~~g~~~I~I~nR~~~ka~~ 56 (167)
T d1npya1 16 KNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQY 56 (167)
T ss_dssp TTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHH
T ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEecccHHHHHH
Confidence 4589999998 9999999999999996 89999999877543
|
| >d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.15 E-value=0.0085 Score=46.89 Aligned_cols=67 Identities=15% Similarity=0.159 Sum_probs=45.8
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCC--eEEEEEcCcchhhh----h------cCCCcEEeecCCCCHHHHHHHhcCc
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRT--RIKALVKDKRNAME----S------FGTYVESMAGDASNKKFLKTALRGV 163 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~R~~~~~~~----~------~~~~v~~v~~D~~d~~~~~~~~~~~ 163 (305)
.++.+|.|+|+ |.+|+.++..|+.+|. ++++++++++++.. . .+........|+ +.+.++
T Consensus 17 ~~~~KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~~~~~d~-------~~~~~a 88 (159)
T d2ldxa1 17 LSRCKITVVGV-GDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSLFLSTPKIVFGKDY-------NVSANS 88 (159)
T ss_dssp CCCCEEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTTTCSCCEEEEESSG-------GGGTTE
T ss_pred CCCCeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcchhcCCCeEEeccch-------hhhccc
Confidence 34578999996 9999999999999985 79999888755221 1 111222222332 347889
Q ss_pred cEEEECC
Q 021928 164 RSIICPS 170 (305)
Q Consensus 164 d~Vi~~~ 170 (305)
|+||.++
T Consensus 89 divvita 95 (159)
T d2ldxa1 89 KLVIITA 95 (159)
T ss_dssp EEEEECC
T ss_pred cEEEEec
Confidence 9998773
|
| >d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Streptococcus pneumoniae [TaxId: 1313]
Probab=96.14 E-value=0.0022 Score=50.07 Aligned_cols=25 Identities=20% Similarity=0.171 Sum_probs=22.4
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCC
Q 021928 99 DAVLVTDGDSDIGQMVILSLIVKRT 123 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~~~g~ 123 (305)
=+|.|.||||++|+++++.|.+..+
T Consensus 2 ~kVaIvGATGyvG~eLirlL~~H~f 26 (154)
T d2gz1a1 2 YTVAVVGATGAVGAQMIKMLEESTL 26 (154)
T ss_dssp EEEEEETTTSHHHHHHHHHHHTCCS
T ss_pred CEEEEECCCcHHHHHHHHHHHcCCC
Confidence 3799999999999999999988864
|
| >d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Thermotoga maritima [TaxId: 2336]
Probab=96.12 E-value=0.0068 Score=45.67 Aligned_cols=31 Identities=13% Similarity=0.009 Sum_probs=27.9
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCCeEEEEE
Q 021928 99 DAVLVTDGDSDIGQMVILSLIVKRTRIKALV 129 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~ 129 (305)
|+|.|.|++|..|+.|++.+.++|+++++..
T Consensus 1 mki~i~G~~GrMG~~i~~~~~~~~~~l~~~i 31 (128)
T d1vm6a3 1 MKYGIVGYSGRMGQEIQKVFSEKGHELVLKV 31 (128)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHhcCCCeEEEEE
Confidence 6899999999999999999999999887653
|
| >d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Putative semialdehyde dehydrogenase species: Rice (Oryza sativa) [TaxId: 4530]
Probab=96.12 E-value=0.0041 Score=49.85 Aligned_cols=34 Identities=18% Similarity=0.176 Sum_probs=28.1
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCC-CeEEEEE
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKR-TRIKALV 129 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~ 129 (305)
+++.+|.|.||||++|+++++.|.+.- .++..+.
T Consensus 3 ~~kikVaIlGATGyvG~elirLL~~HP~~ei~~l~ 37 (183)
T d2cvoa1 3 GEEVRIAVLGASGYTGAEIVRLLANHPQFRIKVMT 37 (183)
T ss_dssp SSCEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEE
T ss_pred CCccEEEEECcccHHHHHHHHHHHhCCCceEEEEe
Confidence 346899999999999999999999875 3666554
|
| >d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Haemophilus influenzae [TaxId: 727]
Probab=96.12 E-value=0.006 Score=48.24 Aligned_cols=67 Identities=16% Similarity=0.226 Sum_probs=48.5
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh---cCC--CcEEeecCCCCHHHHHHHhcCccEEEECCc
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGT--YVESMAGDASNKKFLKTALRGVRSIICPSE 171 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~~~--~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~ 171 (305)
.+++|+|.|+ |+.++.++..|.+.+.+|+++.|+.+++... +.. .+..+..|-. .+..+|.||++++
T Consensus 17 ~~k~vlIlGa-GGaarai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~~~~~~~~~~~~~~-------~~~~~diiIN~tp 88 (171)
T d1p77a1 17 PNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQAVSMDSI-------PLQTYDLVINATS 88 (171)
T ss_dssp TTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGGC-------CCSCCSEEEECCC
T ss_pred CCCEEEEECC-cHHHHHHHHHHcccCceeeeccchHHHHHHHHHHHhhccccchhhhccc-------cccccceeeeccc
Confidence 4689999997 8899999999999888999999998764432 222 2333333321 2567899998843
|
| >d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Toxoplasma gondii [TaxId: 5811]
Probab=96.11 E-value=0.0089 Score=46.45 Aligned_cols=68 Identities=18% Similarity=0.114 Sum_probs=45.5
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcchhhhh----------cCCCcEEeecCCCCHHHHHHHhcCcc
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMES----------FGTYVESMAGDASNKKFLKTALRGVR 164 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~----------~~~~v~~v~~D~~d~~~~~~~~~~~d 164 (305)
.++++|.|.|| |.+|+.++..|...+. ++++++.+++++... .......... ...+++++++|
T Consensus 5 ~k~~KI~IIGa-G~VG~~lA~~l~~~~~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~-----~~~~~~~~~ad 78 (154)
T d1pzga1 5 QRRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAE-----YSYEAALTGAD 78 (154)
T ss_dssp SCCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEE-----CSHHHHHTTCS
T ss_pred cCCCcEEEECC-CHHHHHHHHHHHhCCCceEEEEEeccccchhHHHHHhhhccccCCeeEEecc-----CchhhhhcCCC
Confidence 45689999998 9999999998888884 888888777552211 1111111111 12346788999
Q ss_pred EEEEC
Q 021928 165 SIICP 169 (305)
Q Consensus 165 ~Vi~~ 169 (305)
+|+.+
T Consensus 79 iVvit 83 (154)
T d1pzga1 79 CVIVT 83 (154)
T ss_dssp EEEEC
T ss_pred eEEEe
Confidence 99976
|
| >d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: 6-phosphogluconate dehydrogenase species: Sheep (Ovis orientalis aries) [TaxId: 9940]
Probab=96.01 E-value=0.0049 Score=48.82 Aligned_cols=69 Identities=14% Similarity=0.119 Sum_probs=52.8
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCc--EEeecCCCCHHHHHHHhcCccEEEEC
Q 021928 99 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYV--ESMAGDASNKKFLKTALRGVRSIICP 169 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v--~~v~~D~~d~~~~~~~~~~~d~Vi~~ 169 (305)
.+|.|.|- |.+|..+++.|+++||+|++..|++++..+...... .... .....+.+..++..+|.++.+
T Consensus 3 ~nIg~IGl-G~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~-~a~~~~~~~~~~~~~~~ii~~ 73 (176)
T d2pgda2 3 ADIALIGL-AVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVL-GAHSLEEMVSKLKKPRRIILL 73 (176)
T ss_dssp BSEEEECC-SHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCE-ECSSHHHHHHHBCSSCEEEEC
T ss_pred CcEEEEeE-hHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHhcccccccc-chhhhhhhhhhhcccceEEEe
Confidence 67999997 999999999999999999999999987554322111 1111 134667888899999999876
|
| >d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=96.01 E-value=0.036 Score=43.60 Aligned_cols=96 Identities=11% Similarity=0.039 Sum_probs=60.6
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcchhh--hhcCCCcEEeecCCCC-HHHHHHHh--cCccEEEEC
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAM--ESFGTYVESMAGDASN-KKFLKTAL--RGVRSIICP 169 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~--~~~~~~v~~v~~D~~d-~~~~~~~~--~~~d~Vi~~ 169 (305)
.++.+|+|+|+ |.+|...++.+...|. +|+++++++++.. ..++....+-.-|-.+ .+.+.+.. .++|++|.+
T Consensus 28 ~~g~tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak~~GA~~~in~~~~~~~~~~~~~~~~g~G~d~vi~~ 106 (176)
T d1d1ta2 28 KPGSTCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAVGATECISPKDSTKPISEVLSEMTGNNVGYTFEV 106 (176)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHHTCSEEECGGGCSSCHHHHHHHHHTSCCCEEEEC
T ss_pred CCCCEEEEECC-CchhHHHHHHHHHcCCceEEEecCcHHHHHHHHhcCCcEEECccccchHHHHHHHHhccccceEEEEe
Confidence 35689999987 9999999999999995 8999999988743 2334322221122222 34444434 478999977
Q ss_pred Ccc--hHhhhhhh--cCCCEEEEEccc
Q 021928 170 SEG--FISNAGSL--KGVQHVILLSQL 192 (305)
Q Consensus 170 ~~g--~~~~~a~~--~gv~~~V~iSS~ 192 (305)
.++ ....+... .+-.++|+++..
T Consensus 107 ~g~~~~~~~a~~~~~~~~G~~v~vG~~ 133 (176)
T d1d1ta2 107 IGHLETMIDALASCHMNYGTSVVVGVP 133 (176)
T ss_dssp SCCHHHHHHHHTTSCTTTCEEEECSCC
T ss_pred CCchHHHHHHHHHhhcCCeEEEEEEcc
Confidence 443 23343332 233588887743
|
| >d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=95.98 E-value=0.012 Score=45.98 Aligned_cols=91 Identities=12% Similarity=0.155 Sum_probs=57.2
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcchhh--hhcCCCcEEeecCCCCH-HHHHHHh--cCccEEEECC
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAM--ESFGTYVESMAGDASNK-KFLKTAL--RGVRSIICPS 170 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~--~~~~~~v~~v~~D~~d~-~~~~~~~--~~~d~Vi~~~ 170 (305)
++.+|+|+|++|.+|...++.+...|. +|+++.+++++.. ..++.. .++..+-.|. +.+.+.. .++|++|.+.
T Consensus 27 ~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~~~Ga~-~~i~~~~~~~~~~~~~~~~~~~~d~vid~~ 105 (170)
T d1jvba2 27 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGAD-YVINASMQDPLAEIRRITESKGVDAVIDLN 105 (170)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHTCS-EEEETTTSCHHHHHHHHTTTSCEEEEEESC
T ss_pred CCCEEEEEeccccceeeeeecccccccccccccccchhhHHHHHHcCCc-eeeccCCcCHHHHHHHHhhcccchhhhccc
Confidence 468999999999999999999998885 8888888876633 223321 3333333332 3333333 3589999885
Q ss_pred cc-h-Hhh---hhhhcCCCEEEEEc
Q 021928 171 EG-F-ISN---AGSLKGVQHVILLS 190 (305)
Q Consensus 171 ~g-~-~~~---~a~~~gv~~~V~iS 190 (305)
++ . +.. .++.. .++|.++
T Consensus 106 g~~~~~~~a~~~l~~~--G~iv~~G 128 (170)
T d1jvba2 106 NSEKTLSVYPKALAKQ--GKYVMVG 128 (170)
T ss_dssp CCHHHHTTGGGGEEEE--EEEEECC
T ss_pred ccchHHHhhhhhcccC--CEEEEec
Confidence 43 2 222 22333 3777775
|
| >d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: S-adenosylhomocystein hydrolase species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.97 E-value=0.01 Score=46.57 Aligned_cols=67 Identities=16% Similarity=0.080 Sum_probs=53.6
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEECCcc
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG 172 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~g 172 (305)
.+|+|+|.| .|.||+.+++.|...|.+|++...+|-++.+..-...++. .+++++...|.++.+++.
T Consensus 23 ~Gk~v~V~G-yG~iG~g~A~~~rg~G~~V~v~e~dp~~al~A~~dG~~v~--------~~~~a~~~adivvtaTGn 89 (163)
T d1li4a1 23 AGKVAVVAG-YGDVGKGCAQALRGFGARVIITEIDPINALQAAMEGYEVT--------TMDEACQEGNIFVTTTGC 89 (163)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEEC--------CHHHHTTTCSEEEECSSC
T ss_pred cCCEEEEec-cccccHHHHHHHHhCCCeeEeeecccchhHHhhcCceEee--------ehhhhhhhccEEEecCCC
Confidence 569999999 5999999999999999999999999877555443334433 356788889999988664
|
| >d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Bacterial secondary alcohol dehydrogenase species: Clostridium beijerinckii [TaxId: 1520]
Probab=95.94 E-value=0.0097 Score=47.01 Aligned_cols=92 Identities=14% Similarity=0.137 Sum_probs=56.5
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcchhh--hhcCCCcEEeecCCCC-HHHHHHHhc--CccEEEECC
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAM--ESFGTYVESMAGDASN-KKFLKTALR--GVRSIICPS 170 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~--~~~~~~v~~v~~D~~d-~~~~~~~~~--~~d~Vi~~~ 170 (305)
++.+|+|.|+ |.+|...++.+...|+ +|+++++++++.. +.++. .+++...-.+ .+.+.+... ++|+||.+.
T Consensus 27 ~g~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a~~lGa-~~~i~~~~~~~~~~v~~~t~g~G~D~vid~~ 104 (174)
T d1jqba2 27 MGSSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGA-TDILNYKNGHIEDQVMKLTNGKGVDRVIMAG 104 (174)
T ss_dssp TTCCEEEECC-SHHHHHHHHHHHTTTCSCEEEECCCHHHHHHHHHHTC-SEEECGGGSCHHHHHHHHTTTSCEEEEEECS
T ss_pred CCCEEEEEcC-CcchhhhhhhhhcccccccccccchhhhHHHHHhhCc-cccccccchhHHHHHHHHhhccCcceEEEcc
Confidence 5689999987 9999999999999997 7888888876633 23332 2232221122 345555554 589999874
Q ss_pred c--chHhhhhhhc-CCCEEEEEc
Q 021928 171 E--GFISNAGSLK-GVQHVILLS 190 (305)
Q Consensus 171 ~--g~~~~~a~~~-gv~~~V~iS 190 (305)
+ ..+..+.+.. .-.++++++
T Consensus 105 g~~~~~~~a~~~~~~~G~iv~~G 127 (174)
T d1jqba2 105 GGSETLSQAVKMVKPGGIISNIN 127 (174)
T ss_dssp SCTTHHHHHHHHEEEEEEEEECC
T ss_pred CCHHHHHHHHHHHhcCCEEEEEe
Confidence 4 2233322221 123666665
|
| >d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Horse (Equus caballus) [TaxId: 9796]
Probab=95.92 E-value=0.0062 Score=47.97 Aligned_cols=75 Identities=16% Similarity=0.075 Sum_probs=48.8
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcchhhhh--cCCCcEEeecCCCC-HHHHHHHh--cCccEEEEC
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMES--FGTYVESMAGDASN-KKFLKTAL--RGVRSIICP 169 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~--~~~~v~~v~~D~~d-~~~~~~~~--~~~d~Vi~~ 169 (305)
.++.+|+|.|+ |++|...+.++...|. +|+++++++++.... .+....+...|-.+ .+...+.. .++|++|-+
T Consensus 27 k~GdtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~~~Ga~~~i~~~~~~~~~~~~~~~~~~~G~D~vid~ 105 (176)
T d2jhfa2 27 TQGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGVDFSFEV 105 (176)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEEC
T ss_pred CCCCEEEEECC-CCcHHHHHHHHHHcCCceEEeecCcHHHHHHHHHhCCeeEEecCCchhHHHHHHHHHhcCCCCEEEec
Confidence 35689999999 7899999999999985 888888888774332 22211222223322 23333333 478999977
Q ss_pred Cc
Q 021928 170 SE 171 (305)
Q Consensus 170 ~~ 171 (305)
.+
T Consensus 106 ~G 107 (176)
T d2jhfa2 106 IG 107 (176)
T ss_dssp SC
T ss_pred CC
Confidence 44
|
| >d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Azotobacter vinelandii [TaxId: 354]
Probab=95.88 E-value=0.008 Score=44.44 Aligned_cols=40 Identities=13% Similarity=0.072 Sum_probs=35.2
Q ss_pred cCcCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcc
Q 021928 93 EFPEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR 133 (305)
Q Consensus 93 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~ 133 (305)
+++..+++++|.|| |+||-+++..|.+.|.+|.++.|...
T Consensus 17 ~l~~~p~~i~IiG~-G~ig~E~A~~l~~~G~~Vtiv~~~~~ 56 (119)
T d3lada2 17 DFQNVPGKLGVIGA-GVIGLELGSVWARLGAEVTVLEAMDK 56 (119)
T ss_dssp SCSSCCSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CcccCCCeEEEECC-ChHHHHHHHHHHHcCCceEEEEeecc
Confidence 34556799999998 99999999999999999999998763
|
| >d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=95.85 E-value=0.0071 Score=46.93 Aligned_cols=25 Identities=24% Similarity=0.170 Sum_probs=22.6
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCC
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKR 122 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g 122 (305)
+++|.|+||+|.+|++++..|+..+
T Consensus 3 p~KV~IiGA~G~VG~~la~~l~~~~ 27 (154)
T d5mdha1 3 PIRVLVTGAAGQIAYSLLYSIGNGS 27 (154)
T ss_dssp CEEEEESSTTSHHHHTTHHHHHTTT
T ss_pred ceEEEEECCCCHHHHHHHHHHHHHH
Confidence 5899999999999999999998654
|
| >d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Mammalian thioredoxin reductase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=95.82 E-value=0.0067 Score=45.14 Aligned_cols=37 Identities=16% Similarity=0.124 Sum_probs=32.9
Q ss_pred CcCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcC
Q 021928 94 FPEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKD 131 (305)
Q Consensus 94 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~ 131 (305)
+...+++++|.|| |+||-+++..|.+.|.+|.++.|+
T Consensus 16 l~~~P~~vvIIGg-G~iG~E~A~~l~~lG~~Vtii~~~ 52 (122)
T d1h6va2 16 LPYCPGKTLVVGA-SYVALECAGFLAGIGLDVTVMVRS 52 (122)
T ss_dssp CSSCCCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred cccCCCeEEEECC-CccHHHHHHHHhhcCCeEEEEEec
Confidence 3445689999998 999999999999999999999875
|
| >d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=95.77 E-value=0.0081 Score=44.65 Aligned_cols=38 Identities=11% Similarity=0.068 Sum_probs=34.1
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcc
Q 021928 95 PEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR 133 (305)
Q Consensus 95 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~ 133 (305)
...+++++|.|| |+||-+++..|.+.|.+|.++.|.+.
T Consensus 20 ~~~p~~~vIiG~-G~ig~E~A~~l~~lG~~Vtii~~~~~ 57 (122)
T d1v59a2 20 KEIPKRLTIIGG-GIIGLEMGSVYSRLGSKVTVVEFQPQ 57 (122)
T ss_dssp SSCCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred ccCCCeEEEECC-CchHHHHHHHHHhhCcceeEEEeccc
Confidence 445689999998 99999999999999999999998763
|
| >d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=95.75 E-value=0.015 Score=44.97 Aligned_cols=72 Identities=11% Similarity=0.117 Sum_probs=48.5
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCC-C-HHHHHHHhcCccEEEEC
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDAS-N-KKFLKTALRGVRSIICP 169 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~-d-~~~~~~~~~~~d~Vi~~ 169 (305)
++.+|+|.|+ |.+|...++.+...|++|+++++++++......-+.+.+...-. | .+.+.+...+.+.+|..
T Consensus 27 ~g~~vlv~G~-G~iG~~a~~~a~~~g~~v~~~~~~~~r~~~~k~~Ga~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 100 (168)
T d1rjwa2 27 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKELGADLVVNPLKEDAAKFMKEKVGGVHAAVVT 100 (168)
T ss_dssp TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSEEECTTTSCHHHHHHHHHSSEEEEEES
T ss_pred CCCEEEEeec-ccchhhhhHHHhcCCCeEeccCCCHHHhhhhhhcCcceecccccchhhhhcccccCCCceEEee
Confidence 4589999976 99999999999999999999999887743222222333322222 2 34466666777666655
|
| >d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Mouse (Mus musculus), class II [TaxId: 10090]
Probab=95.63 E-value=0.021 Score=45.02 Aligned_cols=93 Identities=13% Similarity=0.071 Sum_probs=57.2
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcchhh--hhcCCCcEEeecCCC--CHHHHHHHh--cCccEEEEC
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAM--ESFGTYVESMAGDAS--NKKFLKTAL--RGVRSIICP 169 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~--~~~~~~v~~v~~D~~--d~~~~~~~~--~~~d~Vi~~ 169 (305)
++.+|+|+|+ |.||...+..+...|. +|++..+++++.. +.++. ..++...-. ....+.+.. .++|+||-+
T Consensus 28 ~G~~VlV~G~-G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~a~~~Ga-~~~i~~~~~~~~~~~~~~~~~~~G~d~vie~ 105 (174)
T d1e3ia2 28 PGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGA-TDCLNPRELDKPVQDVITELTAGGVDYSLDC 105 (174)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTC-SEEECGGGCSSCHHHHHHHHHTSCBSEEEES
T ss_pred CCCEEEEECC-ChHHHHHHHHHHHhCCceeeeeccchHHHHHHHHhCC-CcccCCccchhhhhhhHhhhhcCCCcEEEEe
Confidence 5689999986 9999999999999997 5777777776632 23432 222222111 223333322 578999988
Q ss_pred Ccc--hHhhhhhhcC--CCEEEEEcc
Q 021928 170 SEG--FISNAGSLKG--VQHVILLSQ 191 (305)
Q Consensus 170 ~~g--~~~~~a~~~g--v~~~V~iSS 191 (305)
.+. .+..+.+... -.+++++.-
T Consensus 106 ~G~~~~~~~a~~~~~~g~G~~v~vG~ 131 (174)
T d1e3ia2 106 AGTAQTLKAAVDCTVLGWGSCTVVGA 131 (174)
T ss_dssp SCCHHHHHHHHHTBCTTTCEEEECCC
T ss_pred cccchHHHHHHHHhhcCCeEEEecCC
Confidence 543 3444433322 247887763
|
| >d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Escherichia coli [TaxId: 562]
Probab=95.59 E-value=0.0091 Score=43.86 Aligned_cols=38 Identities=13% Similarity=0.004 Sum_probs=33.6
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcc
Q 021928 95 PEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR 133 (305)
Q Consensus 95 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~ 133 (305)
+.-+++|+|.|| |++|.+++..|.+.|.+|.++.|.+.
T Consensus 18 ~~~p~~vvIiGg-G~ig~E~A~~l~~~G~~Vtlve~~~~ 55 (116)
T d1gesa2 18 PALPERVAVVGA-GYIGVELGGVINGLGAKTHLFEMFDA 55 (116)
T ss_dssp SSCCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred hhCCCEEEEECC-ChhhHHHHHHhhccccEEEEEeecch
Confidence 344689999998 99999999999999999999998763
|
| >d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent ferredoxin reductase, BphA4 species: Pseudomonas sp., KKS102 [TaxId: 306]
Probab=95.56 E-value=0.0099 Score=44.12 Aligned_cols=36 Identities=14% Similarity=0.240 Sum_probs=32.9
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcc
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR 133 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~ 133 (305)
+.++|+|.|| |++|-+++..|.++|.+|.++.|.+.
T Consensus 29 ~~~~vvIIGg-G~iG~E~A~~l~~~g~~Vtli~~~~~ 64 (121)
T d1d7ya2 29 PQSRLLIVGG-GVIGLELAATARTAGVHVSLVETQPR 64 (121)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred cCCeEEEECc-chhHHHHHHHhhcccceEEEEeeccc
Confidence 3589999998 99999999999999999999998874
|
| >d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Putative formate dehydrogenase species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]
Probab=95.56 E-value=0.0087 Score=47.81 Aligned_cols=59 Identities=20% Similarity=0.282 Sum_probs=46.8
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEEC
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 169 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~ 169 (305)
.+++|.|.|. |.||+.+++.|...|.+|++..|.+.... .. ..+++++++..+|+|+++
T Consensus 41 ~gk~vgIiG~-G~IG~~va~~l~~~g~~v~~~d~~~~~~~------~~-------~~~~l~ell~~sDiv~~~ 99 (181)
T d1qp8a1 41 QGEKVAVLGL-GEIGTRVGKILAALGAQVRGFSRTPKEGP------WR-------FTNSLEEALREARAAVCA 99 (181)
T ss_dssp TTCEEEEESC-STHHHHHHHHHHHTTCEEEEECSSCCCSS------SC-------CBSCSHHHHTTCSEEEEC
T ss_pred cCceEEEecc-ccccccceeeeeccccccccccccccccc------ee-------eeechhhhhhccchhhcc
Confidence 4599999997 88999999999999999999988764221 11 112467899999999976
|
| >d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: S-adenosylhomocystein hydrolase species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]
Probab=95.55 E-value=0.014 Score=45.58 Aligned_cols=67 Identities=13% Similarity=0.066 Sum_probs=55.8
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEECCcc
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG 172 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~g 172 (305)
.+|+++|.|= |.+|+.++++|...|.+|+++..+|-++.+..-++.++.. +.++++..|.+|.+++.
T Consensus 22 aGk~vvV~GY-G~vGrG~A~~~rg~Ga~V~V~E~DPi~alqA~mdGf~v~~--------~~~a~~~aDi~vTaTGn 88 (163)
T d1v8ba1 22 SGKIVVICGY-GDVGKGCASSMKGLGARVYITEIDPICAIQAVMEGFNVVT--------LDEIVDKGDFFITCTGN 88 (163)
T ss_dssp TTSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHTTTCEECC--------HHHHTTTCSEEEECCSS
T ss_pred cCCEEEEecc-cccchhHHHHHHhCCCEEEEEecCchhhHHHHhcCCccCc--------hhHccccCcEEEEcCCC
Confidence 4699999996 9999999999999999999999999776665555555533 46889999999998664
|
| >d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.54 E-value=0.011 Score=44.04 Aligned_cols=37 Identities=8% Similarity=0.087 Sum_probs=33.5
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCc
Q 021928 95 PEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK 132 (305)
Q Consensus 95 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 132 (305)
+.-+++++|.|| |+||-+++..|.+.|.+|.++.|.+
T Consensus 19 ~~~pk~vvIvGg-G~iG~E~A~~l~~~G~~Vtlv~~~~ 55 (125)
T d3grsa2 19 EELPGRSVIVGA-GYIAVEMAGILSALGSKTSLMIRHD 55 (125)
T ss_dssp CSCCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred hhcCCEEEEEcC-CccHHHHHHHHhcCCcEEEEEeecc
Confidence 344689999998 9999999999999999999999976
|
| >d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=95.51 E-value=0.0089 Score=43.77 Aligned_cols=37 Identities=11% Similarity=0.142 Sum_probs=33.2
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCc
Q 021928 95 PEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK 132 (305)
Q Consensus 95 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 132 (305)
+..+++++|.|| |++|-+++..|.+.|.+|.++.|.+
T Consensus 18 ~~~p~~vvIiGg-G~~G~E~A~~l~~~g~~Vtlve~~~ 54 (115)
T d1lvla2 18 KALPQHLVVVGG-GYIGLELGIAYRKLGAQVSVVEARE 54 (115)
T ss_dssp SSCCSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred ccCCCeEEEECC-CHHHHHHHHHHhhcccceEEEeeec
Confidence 445689999998 9999999999999999999998876
|
| >d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH peroxidase species: Enterococcus faecalis [TaxId: 1351]
Probab=95.48 E-value=0.012 Score=43.70 Aligned_cols=36 Identities=14% Similarity=0.127 Sum_probs=32.5
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcc
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR 133 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~ 133 (305)
..++|+|.|| |++|.+++..|.+.|.+|.++.|.+.
T Consensus 29 ~~k~vvViGg-G~iG~E~A~~l~~~g~~Vtlie~~~~ 64 (123)
T d1nhpa2 29 EVNNVVVIGS-GYIGIEAAEAFAKAGKKVTVIDILDR 64 (123)
T ss_dssp TCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CCCEEEEECC-hHHHHHHHHHhhccceEEEEEEecCc
Confidence 4589999997 99999999999999999999988763
|
| >d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Short chain L-3-hydroxyacyl CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.42 E-value=0.0092 Score=48.06 Aligned_cols=37 Identities=11% Similarity=0.051 Sum_probs=34.1
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcch
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN 134 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~ 134 (305)
+-++|.|.|| |.+|+.++..++..|++|++++++++.
T Consensus 3 ~IkkvaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~ 39 (192)
T d1f0ya2 3 IVKHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDI 39 (192)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred eeEEEEEECc-CHHHHHHHHHHHhCCCcEEEEECChHH
Confidence 4589999998 999999999999999999999999865
|
| >d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Plasmodium falciparum [TaxId: 5833]
Probab=95.36 E-value=0.01 Score=43.75 Aligned_cols=34 Identities=6% Similarity=-0.014 Sum_probs=32.1
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCc
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK 132 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 132 (305)
+++|+|.|| |++|-+++..|.+.|.+|.++.|..
T Consensus 22 p~~v~IiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~ 55 (117)
T d1onfa2 22 SKKIGIVGS-GYIAVELINVIKRLGIDSYIFARGN 55 (117)
T ss_dssp CSEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSS
T ss_pred CCEEEEECC-chHHHHHHHHHHhccccceeeehhc
Confidence 589999998 9999999999999999999999875
|
| >d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=95.32 E-value=0.037 Score=42.61 Aligned_cols=37 Identities=11% Similarity=0.161 Sum_probs=30.6
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCC-CeEEEEEcCcch
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRN 134 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~R~~~~ 134 (305)
++++|.|.|+ |.+|+.++..|...+ .++++++++++.
T Consensus 2 p~~KI~IIGa-G~VG~~~a~~l~~~~l~el~L~Di~~~~ 39 (150)
T d1t2da1 2 PKAKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNM 39 (150)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSH
T ss_pred CCCeEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccCCc
Confidence 3579999996 999999998888777 488888887755
|
| >d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=95.20 E-value=0.024 Score=42.92 Aligned_cols=31 Identities=13% Similarity=0.203 Sum_probs=25.6
Q ss_pred EEEEEcCCChHHHHHHHHHHhC-CCeEEEEEc
Q 021928 100 AVLVTDGDSDIGQMVILSLIVK-RTRIKALVK 130 (305)
Q Consensus 100 ~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~R 130 (305)
||.|.|++|..|+.+++.+.+. ++++.+...
T Consensus 1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d 32 (135)
T d1yl7a1 1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELD 32 (135)
T ss_dssp EEEEETTTSHHHHHHHHHHHHSTTSEEEEEEC
T ss_pred CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEe
Confidence 6999999999999999988764 578776553
|
| >d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: 6-phosphogluconate dehydrogenase species: Trypanosoma brucei [TaxId: 5691]
Probab=95.04 E-value=0.0098 Score=46.88 Aligned_cols=69 Identities=12% Similarity=0.090 Sum_probs=48.4
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcC--C--C-cEEeecCCCCHHHHHHHhcCccEEEEC
Q 021928 99 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG--T--Y-VESMAGDASNKKFLKTALRGVRSIICP 169 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~--~--~-v~~v~~D~~d~~~~~~~~~~~d~Vi~~ 169 (305)
|+|.|.|- |..|..++++|++.||+|.+.+|++++..+... . . ..... ...+.+.+...+...+.++.+
T Consensus 2 MkIGvIGl-G~MG~~ma~~L~~~G~~V~~~dr~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 75 (178)
T d1pgja2 2 MDVGVVGL-GVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKANASAPFAGNLK-AFETMEAFAASLKKPRKALIL 75 (178)
T ss_dssp BSEEEECC-SHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSTTGGGEE-ECSCHHHHHHHBCSSCEEEEC
T ss_pred CEEEEEee-hHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCCccccccchh-hhhhhhHHHHhcccceEEEEe
Confidence 78999985 999999999999999999999999887543321 0 0 11111 133456666777777666644
|
| >d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Garden pea (Pisum sativum) [TaxId: 3888]
Probab=95.02 E-value=0.011 Score=43.90 Aligned_cols=40 Identities=10% Similarity=-0.007 Sum_probs=35.3
Q ss_pred CcCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcch
Q 021928 94 FPEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN 134 (305)
Q Consensus 94 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~ 134 (305)
+...+++++|.|| |+||-+++..|.+.|.+|.++.|.+.-
T Consensus 21 l~~~p~~~viiG~-G~iglE~A~~~~~~G~~Vtvi~~~~~~ 60 (123)
T d1dxla2 21 LSEIPKKLVVIGA-GYIGLEMGSVWGRIGSEVTVVEFASEI 60 (123)
T ss_dssp CSSCCSEEEESCC-SHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred ccccCCeEEEEcc-chHHHHHHHHHHhcCCeEEEEEEcccc
Confidence 3455799999998 999999999999999999999998743
|
| >d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramate-alanine ligase MurC species: Haemophilus influenzae [TaxId: 727]
Probab=94.99 E-value=0.057 Score=38.16 Aligned_cols=81 Identities=10% Similarity=0.019 Sum_probs=53.2
Q ss_pred CCCEEEEEcCCChHH-HHHHHHHHhCCCeEEEEEcCcchhh-hhcCCCcEEeecCCCCHHHHHHHhcCccEEEECCc---
Q 021928 97 ARDAVLVTDGDSDIG-QMVILSLIVKRTRIKALVKDKRNAM-ESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE--- 171 (305)
Q Consensus 97 ~~~~vlVtGatG~iG-~~l~~~L~~~g~~V~~~~R~~~~~~-~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~--- 171 (305)
..++|.+.|- |++| +.+++.|.++|++|.+-++...... .+...++++..++-. +.+.+.|.||...+
T Consensus 7 ~~~~ihfiGi-gG~GMs~LA~~L~~~G~~VsGSD~~~~~~~~~L~~~Gi~v~~g~~~------~~i~~~d~vV~S~AI~~ 79 (96)
T d1p3da1 7 RVQQIHFIGI-GGAGMSGIAEILLNEGYQISGSDIADGVVTQRLAQAGAKIYIGHAE------EHIEGASVVVVSSAIKD 79 (96)
T ss_dssp TCCEEEEETT-TSTTHHHHHHHHHHHTCEEEEEESCCSHHHHHHHHTTCEEEESCCG------GGGTTCSEEEECTTSCT
T ss_pred hCCEEEEEEE-CHHHHHHHHHHHHhCCCEEEEEeCCCChhhhHHHHCCCeEEECCcc------ccCCCCCEEEECCCcCC
Confidence 4589999987 4466 7789999999999999988754422 222345666554332 22467898887622
Q ss_pred -chHhhhhhhcCCC
Q 021928 172 -GFISNAGSLKGVQ 184 (305)
Q Consensus 172 -g~~~~~a~~~gv~ 184 (305)
..-...|++.|++
T Consensus 80 ~npel~~A~~~gip 93 (96)
T d1p3da1 80 DNPELVTSKQKRIP 93 (96)
T ss_dssp TCHHHHHHHHTTCC
T ss_pred CCHHHHHHHHcCCC
Confidence 3344556777765
|
| >d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Neisseria meningitidis [TaxId: 487]
Probab=94.97 E-value=0.016 Score=43.27 Aligned_cols=39 Identities=15% Similarity=0.156 Sum_probs=34.9
Q ss_pred cCcCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCc
Q 021928 93 EFPEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK 132 (305)
Q Consensus 93 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 132 (305)
+++..+++++|.|| |+||-+++..|.+.|.+|.++.|.+
T Consensus 21 ~l~~~p~~vvIiGg-G~IG~E~A~~~~~~G~~Vtive~~~ 59 (125)
T d1ojta2 21 ALKEVPGKLLIIGG-GIIGLEMGTVYSTLGSRLDVVEMMD 59 (125)
T ss_dssp TCCCCCSEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred CccccCCeEEEECC-CHHHHHHHHHhhcCCCEEEEEEeec
Confidence 34556799999998 9999999999999999999999876
|
| >d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=94.94 E-value=0.015 Score=45.46 Aligned_cols=74 Identities=20% Similarity=0.196 Sum_probs=45.7
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcchhh--hhcCCCcEEeec-C-CCCHHHHHHHh--cCccEEEE
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAM--ESFGTYVESMAG-D-ASNKKFLKTAL--RGVRSIIC 168 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~--~~~~~~v~~v~~-D-~~d~~~~~~~~--~~~d~Vi~ 168 (305)
.++.+|+|.|+ |++|...++.+...|. +|++..+++++.. ..++. ..++.. + -.+.....+.. .++|+||.
T Consensus 27 ~~G~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~~k~~~ak~lGa-~~~i~~~~~~~~~~~~~~~~~~~g~D~vid 104 (176)
T d2fzwa2 27 EPGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGA-TECINPQDFSKPIQEVLIEMTDGGVDYSFE 104 (176)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTC-SEEECGGGCSSCHHHHHHHHTTSCBSEEEE
T ss_pred CCCCEEEEecc-hhHHHHHHHHHHHHhcCceEEEcccHHHHHHHHHhCC-cEEEeCCchhhHHHHHHHHHcCCCCcEeee
Confidence 35689999998 6899999999999996 5666666666532 23442 222222 1 12223332222 47899998
Q ss_pred CCc
Q 021928 169 PSE 171 (305)
Q Consensus 169 ~~~ 171 (305)
+.+
T Consensus 105 ~~G 107 (176)
T d2fzwa2 105 CIG 107 (176)
T ss_dssp CSC
T ss_pred cCC
Confidence 754
|
| >d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Molybdenum cofactor biosynthesis protein MoeB domain: Molybdenum cofactor biosynthesis protein MoeB species: Escherichia coli [TaxId: 562]
Probab=94.91 E-value=0.09 Score=43.30 Aligned_cols=92 Identities=11% Similarity=0.066 Sum_probs=60.3
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcch----------------------h---hhhcCCCcEEeecCC
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRN----------------------A---MESFGTYVESMAGDA 150 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~----------------------~---~~~~~~~v~~v~~D~ 150 (305)
...+|+|.|+ |++|++++..|+..|. ++.+++.+.-. + .....+.+++...+.
T Consensus 29 ~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~Ve~sNL~RQ~l~~~~diG~~K~~~a~~~l~~~np~~~i~~~~~ 107 (247)
T d1jw9b_ 29 KDSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVNA 107 (247)
T ss_dssp HHCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECS
T ss_pred hCCCEEEECC-CHHHHHHHHHHHHcCCCeEEEECCcccchhhhhhhccccHhhcCchHHHHHHHHHHHhhcccchhhhhh
Confidence 3489999997 9999999999999997 66666544211 0 011224444544443
Q ss_pred C-CHHHHHHHhcCccEEEECCcch-----HhhhhhhcCCCEEEEEc
Q 021928 151 S-NKKFLKTALRGVRSIICPSEGF-----ISNAGSLKGVQHVILLS 190 (305)
Q Consensus 151 ~-d~~~~~~~~~~~d~Vi~~~~g~-----~~~~a~~~gv~~~V~iS 190 (305)
. +.+.....+...|+|+.+.+.. +.+.+.+.+++ +|+.+
T Consensus 108 ~~~~~~~~~~~~~~divid~~d~~~~~~~in~~~~~~~ip-~i~g~ 152 (247)
T d1jw9b_ 108 LLDDAELAALIAEHDLVLDCTDNVAVRNQLNAGCFAAKVP-LVSGA 152 (247)
T ss_dssp CCCHHHHHHHHHTSSEEEECCSSHHHHHHHHHHHHHHTCC-EEEEE
T ss_pred hhhhccccccccccceeeeccchhhhhhhHHHHHHHhCCC-ccccc
Confidence 2 3466677888999999885532 45567777876 44443
|
| >d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH oxidase /nitrite reductase species: Pyrococcus furiosus [TaxId: 2261]
Probab=94.90 E-value=0.016 Score=42.84 Aligned_cols=34 Identities=15% Similarity=0.191 Sum_probs=31.5
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCc
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK 132 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 132 (305)
.++++|.|| |++|-+++..|.+.|.+|.++.|.+
T Consensus 32 ~~~vvIiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~ 65 (122)
T d1xhca2 32 SGEAIIIGG-GFIGLELAGNLAEAGYHVKLIHRGA 65 (122)
T ss_dssp HSEEEEEEC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CCcEEEECC-cHHHHHHHHHhhcccceEEEEeccc
Confidence 479999998 9999999999999999999998875
|
| >d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Acetate-CoA ligase alpha chain, AcdA, N-terminal domain species: Pyrococcus horikoshii [TaxId: 53953]
Probab=94.81 E-value=0.015 Score=43.64 Aligned_cols=84 Identities=14% Similarity=0.161 Sum_probs=56.8
Q ss_pred CCCEEEEEcCC---ChHHHHHHHHHHhCC-CeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEECCcc
Q 021928 97 ARDAVLVTDGD---SDIGQMVILSLIVKR-TRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG 172 (305)
Q Consensus 97 ~~~~vlVtGat---G~iG~~l~~~L~~~g-~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~g 172 (305)
.+++|.|.||| +..|..+.+.|.+.| ++|+.+....+.. .+ +. ..-++.| +=..+|.++.+.+.
T Consensus 7 ~PksIAVVGaS~~~~~~g~~v~~~L~~~~~g~v~pVnP~~~~i---~G--~~-~y~sl~d------lp~~vDlvvi~vp~ 74 (129)
T d2csua1 7 NPKGIAVIGASNDPKKLGYEVFKNLKEYKKGKVYPVNIKEEEV---QG--VK-AYKSVKD------IPDEIDLAIIVVPK 74 (129)
T ss_dssp SCSEEEEETCCSCTTSHHHHHHHHHTTCCSSEEEEECSSCSEE---TT--EE-CBSSTTS------CSSCCSEEEECSCH
T ss_pred CCCeEEEEccCCCCCCcHHHHHHHHHHcCCCcEEEeccCcccc---CC--eE-eecchhh------cCCCCceEEEecCh
Confidence 46999999999 999999999998766 6888886654321 11 11 1123333 22357999987442
Q ss_pred -h---HhhhhhhcCCCEEEEEccc
Q 021928 173 -F---ISNAGSLKGVQHVILLSQL 192 (305)
Q Consensus 173 -~---~~~~a~~~gv~~~V~iSS~ 192 (305)
. +.+.+.+.|++.++.+|+-
T Consensus 75 ~~~~~~~~~~~~~g~~~~vi~s~G 98 (129)
T d2csua1 75 RFVKDTLIQCGEKGVKGVVIITAG 98 (129)
T ss_dssp HHHHHHHHHHHHHTCCEEEECCCS
T ss_pred HHhHHHHHHHHHcCCCEEEEeccc
Confidence 2 4455667899999888764
|
| >d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Nicotinamide nucleotide transhydrogenase dI component species: Rhodospirillum rubrum [TaxId: 1085]
Probab=94.80 E-value=0.037 Score=43.97 Aligned_cols=72 Identities=13% Similarity=-0.062 Sum_probs=51.8
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCC----------------------CCHH
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDA----------------------SNKK 154 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~----------------------~d~~ 154 (305)
++-+|+|.|| |-.|.+-++-....|.+|.+++.+++...+.....-+++..+. ...+
T Consensus 28 ~pa~VvViGa-GvaG~~Aa~~A~~lGA~V~v~D~~~~~~~~l~~l~~~~i~~~~~~~~~~~~~~gyA~~~s~~~~~~~~~ 106 (183)
T d1l7da1 28 PPARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAE 106 (183)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHHTTCEECCC-----------------------CCHHH
T ss_pred CCcEEEEEcC-cHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHhhcceEEEeccccccccccccchhhcCHHHHHHHHH
Confidence 4579999998 9999999999999999999999988764332211122222111 1245
Q ss_pred HHHHHhcCccEEEEC
Q 021928 155 FLKTALRGVRSIICP 169 (305)
Q Consensus 155 ~~~~~~~~~d~Vi~~ 169 (305)
.+.+.+..+|.||.+
T Consensus 107 ~l~~~l~~aDlVI~t 121 (183)
T d1l7da1 107 AVLKELVKTDIAITT 121 (183)
T ss_dssp HHHHHHTTCSEEEEC
T ss_pred HHHHHHHhhhhheee
Confidence 677788999999976
|
| >d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: D-aminoacid oxidase, N-terminal domain domain: D-aminoacid oxidase, N-terminal domain species: Rhodotorula gracilis [TaxId: 5286]
Probab=94.75 E-value=0.022 Score=46.32 Aligned_cols=35 Identities=26% Similarity=0.282 Sum_probs=32.1
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCc
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK 132 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 132 (305)
..++|+|.|| |..|...+.+|.++|++|.++.|+.
T Consensus 5 ~~~kVvVIGa-GiaGl~~A~~L~~~G~~V~vier~~ 39 (268)
T d1c0pa1 5 SQKRVVVLGS-GVIGLSSALILARKGYSVHILARDL 39 (268)
T ss_dssp CSCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCcEEEECc-cHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 3578999998 9999999999999999999999864
|
| >d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Frog (Rana perezi) [TaxId: 8403]
Probab=94.74 E-value=0.038 Score=43.38 Aligned_cols=94 Identities=15% Similarity=0.069 Sum_probs=57.6
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcchhh--hhcCCCcEEeecCCCC--HHHHHHHh--cCccEEEE
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAM--ESFGTYVESMAGDASN--KKFLKTAL--RGVRSIIC 168 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~--~~~~~~v~~v~~D~~d--~~~~~~~~--~~~d~Vi~ 168 (305)
.++.+|+|.|+ |.+|...++.+...|. +|+++++++++.+ ..++. ..++...-.| .+...... .++|++|.
T Consensus 26 ~~G~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~~lGa-~~~i~~~~~d~~~~~~~~~~~~~G~d~vid 103 (174)
T d1p0fa2 26 TPGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGA-TECLNPKDYDKPIYEVICEKTNGGVDYAVE 103 (174)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTC-SEEECGGGCSSCHHHHHHHHTTSCBSEEEE
T ss_pred CCCCEEEEECC-CchhHHHHHHHHHcCCceeeccCChHHHHHHHHHcCC-cEEEcCCCchhHHHHHHHHhcCCCCcEEEE
Confidence 45689999996 9999999999999996 7888888887643 22332 2222211122 23333333 37899998
Q ss_pred CCcc--hHhhhhhh--cCCCEEEEEcc
Q 021928 169 PSEG--FISNAGSL--KGVQHVILLSQ 191 (305)
Q Consensus 169 ~~~g--~~~~~a~~--~gv~~~V~iSS 191 (305)
+.+. ........ .+-.++|++.-
T Consensus 104 ~~g~~~~~~~~~~~~~~~~G~~v~vG~ 130 (174)
T d1p0fa2 104 CAGRIETMMNALQSTYCGSGVTVVLGL 130 (174)
T ss_dssp CSCCHHHHHHHHHTBCTTTCEEEECCC
T ss_pred cCCCchHHHHHHHHHHHhcCceEEEEE
Confidence 7443 33334333 23356777663
|
| >d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain species: Escherichia coli [TaxId: 562]
Probab=94.72 E-value=0.022 Score=38.87 Aligned_cols=52 Identities=13% Similarity=0.096 Sum_probs=39.0
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCC
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASN 152 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d 152 (305)
+|+|.|.|+ |.+|+.++..-...|+++++++.+++...... ..+++..++.+
T Consensus 1 ~k~vgIlG~-GQLgrMl~~Aa~~LG~~v~vldp~~~~pa~~~--a~dvIT~e~E~ 52 (78)
T d3etja2 1 MKQVCVLGN-GQLGRMLRQAGEPLGIAVWPVGLDAEPAAVPF--QQSVITAEIER 52 (78)
T ss_dssp CEEEEEEBC-SHHHHHHHHHHGGGTEEEEEECTTSCGGGSCG--GGSEEEESSSC
T ss_pred CCEEEEEcC-CHHHHHHHHHHHHcCCEEEEEcCCCCCccccc--ccceEEEeecc
Confidence 489999997 99999999999999999999987765433222 23455555543
|
| >d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Transcription corepressor CtbP species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]
Probab=94.69 E-value=0.015 Score=46.87 Aligned_cols=64 Identities=11% Similarity=-0.022 Sum_probs=47.2
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEEC
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 169 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~ 169 (305)
.+++|.|.|. |.||+.+++.|...|.+|++.++.......... ++...+++.++++.+|+|+..
T Consensus 48 ~gktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~--------~~~~~~~l~~ll~~sD~i~~~ 111 (193)
T d1mx3a1 48 RGETLGIIGL-GRVGQAVALRAKAFGFNVLFYDPYLSDGVERAL--------GLQRVSTLQDLLFHSDCVTLH 111 (193)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECTTSCTTHHHHH--------TCEECSSHHHHHHHCSEEEEC
T ss_pred eCceEEEecc-ccccccceeeeeccccceeeccCcccccchhhh--------ccccccchhhccccCCEEEEe
Confidence 4599999996 999999999999999999999886543221110 111124567888899999865
|
| >d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Fatty oxidation complex alpha subunit, middle domain species: Pseudomonas fragi [TaxId: 296]
Probab=94.63 E-value=0.011 Score=47.33 Aligned_cols=36 Identities=14% Similarity=0.021 Sum_probs=33.5
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcch
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN 134 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~ 134 (305)
-++|.|.|| |-+|+.++..++..|++|++++++++.
T Consensus 4 I~~vaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~ 39 (186)
T d1wdka3 4 VKQAAVLGA-GIMGGGIAYQSASKGTPILMKDINEHG 39 (186)
T ss_dssp CSSEEEECC-HHHHHHHHHHHHHTTCCEEEECSSHHH
T ss_pred CCEEEEECc-CHHHHHHHHHHHhCCCeEEEEECCHHH
Confidence 478999998 999999999999999999999999765
|
| >d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: 2,4-dienoyl-CoA reductase, middle domain species: Escherichia coli [TaxId: 562]
Probab=94.63 E-value=0.081 Score=41.80 Aligned_cols=38 Identities=5% Similarity=0.129 Sum_probs=34.2
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcc
Q 021928 95 PEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR 133 (305)
Q Consensus 95 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~ 133 (305)
...+++|+|.|| |..|.+-+..|.++||+|+++.+++.
T Consensus 40 ~~~~k~V~IIGa-GPAGL~AA~~la~~G~~Vtl~E~~~~ 77 (179)
T d1ps9a3 40 AVQKKNLAVVGA-GPAGLAFAINAAARGHQVTLFDAHSE 77 (179)
T ss_dssp CSSCCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred CCCCcEEEEECc-cHHHHHHHHHHHhhccceEEEeccCc
Confidence 445799999998 99999999999999999999998753
|
| >d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-lactate dehydrogenase species: Lactobacillus helveticus [TaxId: 1587]
Probab=94.61 E-value=0.026 Score=45.55 Aligned_cols=62 Identities=15% Similarity=0.073 Sum_probs=46.4
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEEC
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 169 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~ 169 (305)
.+++|.|.|- |.||+.+++.|...|.+|++.++.......... + ..+++.++++.+|+|+++
T Consensus 42 ~gk~vgIiG~-G~IG~~va~~l~~fg~~V~~~d~~~~~~~~~~~--~--------~~~~l~~~l~~sDii~~~ 103 (197)
T d1j4aa1 42 RDQVVGVVGT-GHIGQVFMQIMEGFGAKVITYDIFRNPELEKKG--Y--------YVDSLDDLYKQADVISLH 103 (197)
T ss_dssp GGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCHHHHHTT--C--------BCSCHHHHHHHCSEEEEC
T ss_pred cCCeEEEecc-cccchhHHHhHhhhcccccccCcccccccccce--e--------eecccccccccccccccc
Confidence 4599999996 999999999999999999998766543221111 1 123467788899999866
|
| >d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Putidaredoxin reductase species: Pseudomonas putida [TaxId: 303]
Probab=94.50 E-value=0.025 Score=42.44 Aligned_cols=36 Identities=25% Similarity=0.302 Sum_probs=32.9
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcc
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR 133 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~ 133 (305)
..++|+|.|| |++|-+++..|.+.|.+|.++.+.+.
T Consensus 34 ~~k~v~VIGg-G~iG~E~A~~l~~~g~~Vtvie~~~~ 69 (133)
T d1q1ra2 34 ADNRLVVIGG-GYIGLEVAATAIKANMHVTLLDTAAR 69 (133)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred cCCEEEEECC-chHHHHHHHHHHhhCcceeeeeeccc
Confidence 3589999997 99999999999999999999998764
|
| >d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Formaldehyde dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=94.34 E-value=0.1 Score=41.64 Aligned_cols=73 Identities=10% Similarity=-0.009 Sum_probs=46.2
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcchhhhhcCCCcEEeecCCCC---HHHHHHHhc--CccEEEEC
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGTYVESMAGDASN---KKFLKTALR--GVRSIICP 169 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~v~~v~~D~~d---~~~~~~~~~--~~d~Vi~~ 169 (305)
.++.+|+|.|+ |.+|...+..+...|. +|+++++++++......-+...+. |-.+ .+.+.+... ++|.+|.+
T Consensus 24 ~~G~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a~~~Ga~~~~-~~~~~~~~~~i~~~t~g~g~D~vid~ 101 (195)
T d1kola2 24 GPGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQGFEIAD-LSLDTPLHEQIAALLGEPEVDCAVDA 101 (195)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCEEEE-TTSSSCHHHHHHHHHSSSCEEEEEEC
T ss_pred CCCCEEEEECc-CHHHHHHHHHHHhhcccceeeecccchhhHhhhhccccEEE-eCCCcCHHHHHHHHhCCCCcEEEEEC
Confidence 35689999986 9999888888878886 788888887664322211233332 2222 234444443 57888876
Q ss_pred C
Q 021928 170 S 170 (305)
Q Consensus 170 ~ 170 (305)
.
T Consensus 102 v 102 (195)
T d1kola2 102 V 102 (195)
T ss_dssp C
T ss_pred c
Confidence 3
|
| >d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase species: Xanthobacter sp., py2 [TaxId: 35809]
Probab=94.26 E-value=0.033 Score=40.66 Aligned_cols=36 Identities=19% Similarity=0.143 Sum_probs=32.7
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcc
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR 133 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~ 133 (305)
++++|+|.|| |++|.+++..|...|.+|.++.|.+.
T Consensus 21 ~~~~vvVvGg-G~ig~E~A~~l~~~g~~vt~i~~~~~ 56 (121)
T d1mo9a2 21 PGSTVVVVGG-SKTAVEYGCFFNATGRRTVMLVRTEP 56 (121)
T ss_dssp CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCT
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhcchhheEeeccch
Confidence 4589999997 99999999999999999999998763
|
| >d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Benzyl alcohol dehydrogenase species: Acinetobacter calcoaceticus [TaxId: 471]
Probab=94.25 E-value=0.071 Score=41.56 Aligned_cols=92 Identities=10% Similarity=0.142 Sum_probs=54.8
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEE-EEEcCcchhh--hhcCCCcEEeecCCCC-HHHHHHHhc-CccEEEECC
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIK-ALVKDKRNAM--ESFGTYVESMAGDASN-KKFLKTALR-GVRSIICPS 170 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~-~~~R~~~~~~--~~~~~~v~~v~~D~~d-~~~~~~~~~-~~d~Vi~~~ 170 (305)
.++.+|+|.|+ |.+|...++.+...|.+++ +..+++.+.. +.++. .+++..+-.| .+.+++... ++|+||.+.
T Consensus 27 ~~g~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a~~~Ga-~~~i~~~~~~~~~~i~~~t~gg~D~vid~~ 104 (174)
T d1f8fa2 27 TPASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGA-THVINSKTQDPVAAIKEITDGGVNFALEST 104 (174)
T ss_dssp CTTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTC-SEEEETTTSCHHHHHHHHTTSCEEEEEECS
T ss_pred CCCCEEEEeCC-CHHHhhhhhcccccccceeeeeccHHHHHHHHHHcCC-eEEEeCCCcCHHHHHHHHcCCCCcEEEEcC
Confidence 35689999997 9999999998888898655 4556665532 23432 2343333223 233444433 589999774
Q ss_pred cc--hHhhh---hhhcCCCEEEEEcc
Q 021928 171 EG--FISNA---GSLKGVQHVILLSQ 191 (305)
Q Consensus 171 ~g--~~~~~---a~~~gv~~~V~iSS 191 (305)
+. .+..+ .+.. .++++++.
T Consensus 105 G~~~~~~~~~~~~~~~--G~i~~~G~ 128 (174)
T d1f8fa2 105 GSPEILKQGVDALGIL--GKIAVVGA 128 (174)
T ss_dssp CCHHHHHHHHHTEEEE--EEEEECCC
T ss_pred CcHHHHHHHHhcccCc--eEEEEEee
Confidence 42 23332 2333 37777654
|
| >d2dt5a2 c.2.1.12 (A:78-203) Transcriptional repressor Rex, C-terminal domain {Thermus aquaticus [TaxId: 271]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Transcriptional repressor Rex, C-terminal domain domain: Transcriptional repressor Rex, C-terminal domain species: Thermus aquaticus [TaxId: 271]
Probab=94.25 E-value=0.044 Score=40.75 Aligned_cols=91 Identities=3% Similarity=-0.063 Sum_probs=58.1
Q ss_pred CEEEEEcCCChHHHHHHHHHH-hCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhc-CccEEEECCc----c
Q 021928 99 DAVLVTDGDSDIGQMVILSLI-VKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR-GVRSIICPSE----G 172 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~-~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~-~~d~Vi~~~~----g 172 (305)
.+|+|.|| |.+|+++++.+. +.+++++++..+..+.....-.++.++.. +.+.+..+ .++.++.+.+ .
T Consensus 4 ~~v~I~Ga-G~~G~~l~~~l~~~~~~~iv~fiDdd~~k~G~~I~Gi~V~~~-----~~l~~~~~~~i~iai~~i~~~~~~ 77 (126)
T d2dt5a2 4 WGLCIVGM-GRLGSALADYPGFGESFELRGFFDVDPEKVGRPVRGGVIEHV-----DLLPQRVPGRIEIALLTVPREAAQ 77 (126)
T ss_dssp EEEEEECC-SHHHHHHHHCSCCCSSEEEEEEEESCTTTTTCEETTEEEEEG-----GGHHHHSTTTCCEEEECSCHHHHH
T ss_pred ceEEEEcC-CHHHHHHHHhHhhcCCcEEEEEEeCchHhcCCEECCEEEecH-----HHHHHHHhhcccEEEEeCCHHHHH
Confidence 58999998 999999999775 45789998876543332221124555533 23444443 4566666543 2
Q ss_pred hHhhhhhhcCCCEEEEEcccccc
Q 021928 173 FISNAGSLKGVQHVILLSQLSVY 195 (305)
Q Consensus 173 ~~~~~a~~~gv~~~V~iSS~~~~ 195 (305)
.+.+.+.+.|++.+.-++.....
T Consensus 78 ~I~d~l~~~gIk~I~~f~~~~l~ 100 (126)
T d2dt5a2 78 KAADLLVAAGIKGILNFAPVVLE 100 (126)
T ss_dssp HHHHHHHHHTCCEEEECSSSCCC
T ss_pred HHHHHHHHcCCCEEeecCceeec
Confidence 35666788899988877655443
|
| >d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Hypothetical protein PH1109 species: Pyrococcus horikoshii [TaxId: 53953]
Probab=94.09 E-value=0.04 Score=41.79 Aligned_cols=82 Identities=7% Similarity=0.030 Sum_probs=53.7
Q ss_pred CCCEEEEEcCC---ChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEECCc-c
Q 021928 97 ARDAVLVTDGD---SDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE-G 172 (305)
Q Consensus 97 ~~~~vlVtGat---G~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~-g 172 (305)
+.++|.|.||| +..|..+++.|.+.||+|+.+....... .+ ..+ . .++.++-..+|.++.+.+ .
T Consensus 18 ~~ksIAVVGaS~~~~~~g~~v~~~L~~~g~~v~pVnP~~~~i---~G--~~~-~------~sl~dlp~~iD~v~i~vp~~ 85 (139)
T d2d59a1 18 RYKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPKYEEV---LG--RKC-Y------PSVLDIPDKIEVVDLFVKPK 85 (139)
T ss_dssp HCCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEE---TT--EEC-B------SSGGGCSSCCSEEEECSCHH
T ss_pred cCCeEEEEeecCCCCCchHHHHHHHHHCCCEEEEECCccccc---CC--Ccc-c------ccccccCccceEEEEEeCHH
Confidence 46999999999 7899999999999999998886543221 11 111 1 112233345788887733 2
Q ss_pred h---HhhhhhhcCCCEEEEEc
Q 021928 173 F---ISNAGSLKGVQHVILLS 190 (305)
Q Consensus 173 ~---~~~~a~~~gv~~~V~iS 190 (305)
. +.+.+.+.|++.+++.+
T Consensus 86 ~~~~~~~e~~~~g~k~v~~~~ 106 (139)
T d2d59a1 86 LTMEYVEQAIKKGAKVVWFQY 106 (139)
T ss_dssp HHHHHHHHHHHHTCSEEEECT
T ss_pred HHHHHHHHHHHhCCCEEEEec
Confidence 2 34445567888776643
|
| >d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-2-hydroxyisocaproate dehydrogenase species: Lactobacillus casei [TaxId: 1582]
Probab=94.04 E-value=0.021 Score=46.11 Aligned_cols=61 Identities=15% Similarity=0.034 Sum_probs=45.9
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEEC
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 169 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~ 169 (305)
.+++|.|.|. |.||+.+++.|...|.+|++.++....... ..+.+ .++.++++.+|+|+++
T Consensus 44 ~~ktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~~---~~~~~--------~~l~~l~~~~D~v~~~ 104 (199)
T d1dxya1 44 GQQTVGVMGT-GHIGQVAIKLFKGFGAKVIAYDPYPMKGDH---PDFDY--------VSLEDLFKQSDVIDLH 104 (199)
T ss_dssp GGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCSSCC---TTCEE--------CCHHHHHHHCSEEEEC
T ss_pred cceeeeeeec-ccccccccccccccceeeeccCCccchhhh---cchhH--------HHHHHHHHhcccceee
Confidence 4599999996 999999999999999999999886543211 11221 2466778889999865
|
| >d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Phosphoglycerate dehydrogenase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=93.99 E-value=0.023 Score=45.31 Aligned_cols=63 Identities=19% Similarity=0.011 Sum_probs=46.8
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEEC
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 169 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~ 169 (305)
.++++.|.|. |.||+.+++.+...|.+|++..+......... ..++. .+++++++.+|+|+.+
T Consensus 43 ~~k~vgiiG~-G~IG~~va~~~~~fg~~v~~~d~~~~~~~~~~-~~~~~--------~~l~ell~~sDiv~~~ 105 (184)
T d1ygya1 43 FGKTVGVVGL-GRIGQLVAQRIAAFGAYVVAYDPYVSPARAAQ-LGIEL--------LSLDDLLARADFISVH 105 (184)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECTTSCHHHHHH-HTCEE--------CCHHHHHHHCSEEEEC
T ss_pred cceeeeeccc-cchhHHHHHHhhhccceEEeecCCCChhHHhh-cCcee--------ccHHHHHhhCCEEEEc
Confidence 4589999996 99999999999999999999988754432211 11222 2356788999999965
|
| >d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-glycerate dehydrogenase species: Hyphomicrobium methylovorum [TaxId: 84]
Probab=93.99 E-value=0.031 Score=44.81 Aligned_cols=65 Identities=11% Similarity=-0.014 Sum_probs=46.9
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEEC
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 169 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~ 169 (305)
.++++.|.|. |.||+.+++.|...|.+|+..++............ ....+++.++++.+|+|+.+
T Consensus 46 ~g~tvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~~~-------~~~~~~l~~ll~~sD~v~l~ 110 (191)
T d1gdha1 46 DNKTLGIYGF-GSIGQALAKRAQGFDMDIDYFDTHRASSSDEASYQ-------ATFHDSLDSLLSVSQFFSLN 110 (191)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSCCCHHHHHHHT-------CEECSSHHHHHHHCSEEEEC
T ss_pred cccceEEeec-ccchHHHHHHHHhhccccccccccccccchhhccc-------ccccCCHHHHHhhCCeEEec
Confidence 4599999997 99999999999999999999887654322111100 11124577889999999865
|
| >d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Dihydroxypyridine hydroxylase DhpH species: Arthrobacter nicotinovorans [TaxId: 29320]
Probab=93.93 E-value=0.036 Score=45.38 Aligned_cols=36 Identities=19% Similarity=0.208 Sum_probs=32.7
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcc
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR 133 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~ 133 (305)
..++|+|.|| |..|...+..|.++|++|+++.|+++
T Consensus 3 ~~~kV~IiGa-G~aGl~~A~~L~~~G~~v~v~Er~~~ 38 (265)
T d2voua1 3 TTDRIAVVGG-SISGLTAALMLRDAGVDVDVYERSPQ 38 (265)
T ss_dssp CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCCcEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 3589999998 99999999999999999999998753
|
| >d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Dihydropyrimidine dehydrogenase, domain 2 species: Pig (Sus scrofa) [TaxId: 9823]
Probab=93.90 E-value=0.029 Score=43.94 Aligned_cols=35 Identities=9% Similarity=-0.043 Sum_probs=31.4
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcc
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKR 133 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~ 133 (305)
+++|+|.|| |..|...+..|.++|+ +|.++.|.+.
T Consensus 4 ~~kVaIIGa-GpaGl~aA~~l~~~G~~~V~v~E~~~~ 39 (196)
T d1gtea4 4 SAKIALLGA-GPASISCASFLARLGYSDITIFEKQEY 39 (196)
T ss_dssp GCCEEEECC-SHHHHHHHHHHHHTTCCCEEEEESSSS
T ss_pred CCEEEEECC-hHHHHHHHHHHHHCCCCeEEEEEecCc
Confidence 489999998 9999999999999998 5989888753
|
| >d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Aeropyrum pernix [TaxId: 56636]
Probab=93.84 E-value=0.092 Score=40.69 Aligned_cols=92 Identities=14% Similarity=0.134 Sum_probs=54.2
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcchhhh--hcCCCcEEeecCCCCHHHHHHHh--cCccEEEECCc
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAME--SFGTYVESMAGDASNKKFLKTAL--RGVRSIICPSE 171 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~--~~~~~v~~v~~D~~d~~~~~~~~--~~~d~Vi~~~~ 171 (305)
++.+|+|.|+ |.+|...++.+...|. +|++.++++++... .++. .+++..+=.+.+.+.+.. .++|+||.+.+
T Consensus 32 ~g~~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~~~ga-~~~i~~~~~~~~~~~~~~~~~g~d~vid~~g 109 (172)
T d1h2ba2 32 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERLGA-DHVVDARRDPVKQVMELTRGRGVNVAMDFVG 109 (172)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHHTTC-SEEEETTSCHHHHHHHHTTTCCEEEEEESSC
T ss_pred CCCEEEEeCC-ChHHHHHHHHHHhhcCcccccccchhHHHHHHhhccc-ceeecCcccHHHHHHHhhCCCCceEEEEecC
Confidence 4589999986 9999999998888886 66667777765332 2222 234333222233344433 35899998855
Q ss_pred ch--Hhhhhhh-cCCCEEEEEc
Q 021928 172 GF--ISNAGSL-KGVQHVILLS 190 (305)
Q Consensus 172 g~--~~~~a~~-~gv~~~V~iS 190 (305)
+. +..+.+. ..-.++|.+.
T Consensus 110 ~~~~~~~a~~~l~~~G~iv~~G 131 (172)
T d1h2ba2 110 SQATVDYTPYLLGRMGRLIIVG 131 (172)
T ss_dssp CHHHHHHGGGGEEEEEEEEECC
T ss_pred cchHHHHHHHHHhCCCEEEEEe
Confidence 32 3332222 1124777765
|
| >d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Protoporphyrinogen oxidase species: Tobacco (Nicotiana tabacum) [TaxId: 4097]
Probab=93.73 E-value=0.033 Score=45.65 Aligned_cols=34 Identities=12% Similarity=0.125 Sum_probs=31.1
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCc
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK 132 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 132 (305)
.|+|+|.|| |.-|...+.+|.++|++|.++.+++
T Consensus 1 ~KkV~IIGa-G~aGL~aA~~La~~G~~V~vlE~~~ 34 (373)
T d1seza1 1 AKRVAVIGA-GVSGLAAAYKLKIHGLNVTVFEAEG 34 (373)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHTTSCEEEEECSSS
T ss_pred CCEEEEECc-CHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 389999998 9999999999999999999998764
|
| >d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Escherichia coli [TaxId: 562]
Probab=93.67 E-value=0.0082 Score=47.12 Aligned_cols=87 Identities=9% Similarity=0.057 Sum_probs=48.1
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhC-CCeEEEEE-cCcchhh-hhcCCCcEEeecCCCCHHHHHHHhcCccEEEEC-Ccch
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVK-RTRIKALV-KDKRNAM-ESFGTYVESMAGDASNKKFLKTALRGVRSIICP-SEGF 173 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~-R~~~~~~-~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~-~~g~ 173 (305)
.++|+|.|++|..|+.+++.+.+. +.++++.. |...... ...+.-......++.-.+++...++.+|+||-. .+..
T Consensus 4 ~ikI~i~Ga~GrMG~~i~~~i~~~~~~~lv~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~DViIDFs~p~~ 83 (162)
T d1diha1 4 NIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAVKDDFDVFIDFTRPEG 83 (162)
T ss_dssp BEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCEESCSTTTTTSCSEEEECSCHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecccchhccchhhhhhccccCCceeeccHHHHhcccceEEEeccHHH
Confidence 489999999999999999999876 56776654 3322211 001000000000111112233566788888854 4432
Q ss_pred ---HhhhhhhcCCC
Q 021928 174 ---ISNAGSLKGVQ 184 (305)
Q Consensus 174 ---~~~~a~~~gv~ 184 (305)
..+.|.+.+++
T Consensus 84 ~~~~~~~a~~~~~~ 97 (162)
T d1diha1 84 TLNHLAFCRQHGKG 97 (162)
T ss_dssp HHHHHHHHHHTTCE
T ss_pred HHHHHHHHHhccce
Confidence 44556667764
|
| >d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Phenylalanine dehydrogenase species: Rhodococcus sp., M4 [TaxId: 1831]
Probab=93.66 E-value=0.1 Score=41.97 Aligned_cols=80 Identities=11% Similarity=0.010 Sum_probs=52.8
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHh-cCccEEEEC-Ccch
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTAL-RGVRSIICP-SEGF 173 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~-~~~d~Vi~~-~~g~ 173 (305)
..+++|+|-| -|.+|+++++.|.+.|.+|++.+.++.........+.+.+.. .+++ ..||+++-| .++.
T Consensus 25 L~gk~v~IqG-~G~VG~~~A~~L~~~Gakvvv~d~d~~~~~~~~~~g~~~~~~--------~~~~~~~~DI~iPcA~~~~ 95 (201)
T d1c1da1 25 LDGLTVLVQG-LGAVGGSLASLAAEAGAQLLVADTDTERVAHAVALGHTAVAL--------EDVLSTPCDVFAPCAMGGV 95 (201)
T ss_dssp STTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECCG--------GGGGGCCCSEEEECSCSCC
T ss_pred CCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEecchHHHHHHHHhhcccccCc--------cccccccceeeeccccccc
Confidence 3569999999 599999999999999999998888776544332222333321 2334 378998855 4443
Q ss_pred H-hhhhhhcCCC
Q 021928 174 I-SNAGSLKGVQ 184 (305)
Q Consensus 174 ~-~~~a~~~gv~ 184 (305)
+ .+.+++-+++
T Consensus 96 I~~~~a~~i~ak 107 (201)
T d1c1da1 96 ITTEVARTLDCS 107 (201)
T ss_dssp BCHHHHHHCCCS
T ss_pred ccHHHHhhhhhh
Confidence 2 3344555554
|
| >d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=93.66 E-value=0.029 Score=44.12 Aligned_cols=39 Identities=10% Similarity=0.130 Sum_probs=33.5
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME 137 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~ 137 (305)
..++|+|.|+ |+.+++++..|.+.| +|.++.|+.+++.+
T Consensus 17 ~~k~vlIlGa-GG~arai~~aL~~~~-~i~I~nR~~~ka~~ 55 (177)
T d1nvta1 17 KDKNIVIYGA-GGAARAVAFELAKDN-NIIIANRTVEKAEA 55 (177)
T ss_dssp CSCEEEEECC-SHHHHHHHHHHTSSS-EEEEECSSHHHHHH
T ss_pred CCCEEEEECC-cHHHHHHHHHHcccc-ceeeehhhhhHHHH
Confidence 4599999997 889999999998777 99999999877543
|
| >d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Formate dehydrogenase species: Pseudomonas sp., strain 101 [TaxId: 306]
Probab=93.66 E-value=0.045 Score=43.58 Aligned_cols=65 Identities=8% Similarity=-0.070 Sum_probs=46.7
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEEC
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 169 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~ 169 (305)
..++|.|.|. |.||+++++.|...|.+|....|............+ ....++.++++.+|+|+.+
T Consensus 43 ~~~~vgiiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~~~~-------~~~~~l~~~l~~sD~v~~~ 107 (188)
T d2naca1 43 EAMHVGTVAA-GRIGLAVLRRLAPFDVHLHYTDRHRLPESVEKELNL-------TWHATREDMYPVCDVVTLN 107 (188)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHGGGTCEEEEECSSCCCHHHHHHHTC-------EECSSHHHHGGGCSEEEEC
T ss_pred cccceeeccc-cccchhhhhhhhccCceEEEEeeccccccccccccc-------cccCCHHHHHHhccchhhc
Confidence 4589999996 999999999999999999999886533211111011 1124566789999999865
|
| >d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: UDP-galactopyranose mutase, N-terminal domain domain: UDP-galactopyranose mutase, N-terminal domain species: Klebsiella pneumoniae [TaxId: 573]
Probab=93.61 E-value=0.041 Score=47.37 Aligned_cols=34 Identities=12% Similarity=0.184 Sum_probs=31.5
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCc
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK 132 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 132 (305)
+|+|+|.|| |.-|...|.+|.++|++|.++.++.
T Consensus 2 ~KKI~IIGa-G~sGL~aA~~L~k~G~~V~viEk~~ 35 (314)
T d2bi7a1 2 SKKILIVGA-GFSGAVIGRQLAEKGHQVHIIDQRD 35 (314)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred CCEEEEECC-cHHHHHHHHHHHhCCCCEEEEECCC
Confidence 589999998 9999999999999999999998765
|
| >d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase species: Zymomonas mobilis [TaxId: 542]
Probab=93.58 E-value=0.18 Score=38.55 Aligned_cols=34 Identities=21% Similarity=0.243 Sum_probs=28.6
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhC--CCeEEEEEcC
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVK--RTRIKALVKD 131 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~R~ 131 (305)
+|+|.|.|+||.||.....-+.+. .++|++++=.
T Consensus 2 pK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~ 37 (150)
T d1r0ka2 2 PRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTAN 37 (150)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEES
T ss_pred CcEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeC
Confidence 599999999999999999888765 4788887543
|
| >d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Hypothetical protein PF0725 species: Pyrococcus furiosus [TaxId: 2261]
Probab=93.55 E-value=0.061 Score=39.39 Aligned_cols=79 Identities=9% Similarity=0.210 Sum_probs=51.2
Q ss_pred CEEEEEcCC---ChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEECCc-ch-
Q 021928 99 DAVLVTDGD---SDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE-GF- 173 (305)
Q Consensus 99 ~~vlVtGat---G~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~-g~- 173 (305)
|+|.|.||| +..|..+.+.|.+.||+|+.+..+.+.. .+ +..+ .++.++=+.+|.++.+.+ ..
T Consensus 2 KsIAVvGaS~~~~k~g~~v~~~L~~~g~~V~pVnP~~~~i---~G--~~~y-------~sl~~lp~~~D~vvi~vp~~~~ 69 (116)
T d1y81a1 2 RKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYDEI---EG--LKCY-------RSVRELPKDVDVIVFVVPPKVG 69 (116)
T ss_dssp CEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEE---TT--EECB-------SSGGGSCTTCCEEEECSCHHHH
T ss_pred cEEEEEcccCCCCCcHHHHHHHHHHCCCEEEEEccccccc---cC--cccc-------ccchhccccceEEEEEeCHHHH
Confidence 789999998 6799999999999999988875443221 11 1211 122223346788887743 22
Q ss_pred --HhhhhhhcCCCEEEEE
Q 021928 174 --ISNAGSLKGVQHVILL 189 (305)
Q Consensus 174 --~~~~a~~~gv~~~V~i 189 (305)
..+.+.+.|++.+++-
T Consensus 70 ~~~l~~~~~~g~k~v~~~ 87 (116)
T d1y81a1 70 LQVAKEAVEAGFKKLWFQ 87 (116)
T ss_dssp HHHHHHHHHTTCCEEEEC
T ss_pred HHHHHHHHhcCCceEEec
Confidence 3344566788877653
|
| >d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Glycine oxidase ThiO species: Bacillus sp. [TaxId: 1409]
Probab=93.47 E-value=0.034 Score=46.06 Aligned_cols=32 Identities=16% Similarity=0.211 Sum_probs=29.7
Q ss_pred EEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCc
Q 021928 100 AVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK 132 (305)
Q Consensus 100 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 132 (305)
-|+|.|| |.+|..++.+|+++|++|+++.|+.
T Consensus 6 DvvIIGa-Gi~Gls~A~~La~~G~~V~vlE~~~ 37 (276)
T d1ryia1 6 EAVVIGG-GIIGSAIAYYLAKENKNTALFESGT 37 (276)
T ss_dssp EEEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CEEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 3999998 9999999999999999999999864
|
| >d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Siroheme synthase N-terminal domain-like domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=93.33 E-value=0.038 Score=42.15 Aligned_cols=34 Identities=15% Similarity=0.377 Sum_probs=31.0
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcC
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKD 131 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~ 131 (305)
.+++|||.|| |.+|..-++.|++.|.+|++++..
T Consensus 12 ~gkrvLViGg-G~va~~ka~~Ll~~GA~VtVvap~ 45 (150)
T d1kyqa1 12 KDKRILLIGG-GEVGLTRLYKLMPTGCKLTLVSPD 45 (150)
T ss_dssp TTCEEEEEEE-SHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCC
Confidence 4599999999 999999999999999999999654
|
| >d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: L-aminoacid oxidase species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]
Probab=93.29 E-value=0.039 Score=46.22 Aligned_cols=36 Identities=11% Similarity=0.118 Sum_probs=32.6
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCc
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK 132 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 132 (305)
..+++|+|.|| |..|...+..|.++|++|.++.+++
T Consensus 28 ~~pkkV~IIGa-G~aGLsaA~~L~~~G~~V~vlE~~~ 63 (370)
T d2iida1 28 SNPKHVVIVGA-GMAGLSAAYVLAGAGHQVTVLEASE 63 (370)
T ss_dssp SSCCEEEEECC-BHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred CCCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 45689999998 9999999999999999999998764
|
| >d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=93.06 E-value=0.16 Score=39.76 Aligned_cols=94 Identities=18% Similarity=0.115 Sum_probs=55.9
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCC-CeEEEEEcC-cch-hhhhcCCCcEEeecCCCC-----------HHHHHHHhcC
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKD-KRN-AMESFGTYVESMAGDASN-----------KKFLKTALRG 162 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~R~-~~~-~~~~~~~~v~~v~~D~~d-----------~~~~~~~~~~ 162 (305)
|.++|.|-|- |-||+.+++.|.++. .+|+++... +.. .......++..+..+... ...+..++++
T Consensus 1 M~irIaINGf-GRIGR~v~Ral~~~~dieiVaINd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (172)
T d2czca2 1 MKVKVGVNGY-GTIGKRVAYAVTKQDDMELIGITKTKPDFEAYRAKELGIPVYAASEEFIPRFEKEGFEVAGTLNDLLEK 79 (172)
T ss_dssp CCEEEEEECC-SHHHHHHHHHHHTCTTEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHHTCCCSCBHHHHHTT
T ss_pred CcEEEEEECC-CHHHHHHHHHHHhCCCceEEEEecCCChHHHHHhhhcCceeecccccceeeecccCccccchhhhhhcc
Confidence 4579999995 999999999998765 688877643 222 111111112222222221 1234455679
Q ss_pred ccEEEECCcchHh----hhhhhcCCCEEEEEccc
Q 021928 163 VRSIICPSEGFIS----NAGSLKGVQHVILLSQL 192 (305)
Q Consensus 163 ~d~Vi~~~~g~~~----~~a~~~gv~~~V~iSS~ 192 (305)
+|+|+-++|.+.. ..-.++|++ .|++|..
T Consensus 80 vDvViEcTG~f~~~~~~~~hl~~G~k-~Vi~s~~ 112 (172)
T d2czca2 80 VDIIVDATPGGIGAKNKPLYEKAGVK-AIFQGGE 112 (172)
T ss_dssp CSEEEECCSTTHHHHHHHHHHHHTCE-EEECTTS
T ss_pred CCEEEECCCCCCCHHHHHHHHHcCCC-EEEECCC
Confidence 9999988776532 223457875 4456653
|
| >d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Protoporphyrinogen oxidase species: Myxococcus xanthus [TaxId: 34]
Probab=93.00 E-value=0.039 Score=45.23 Aligned_cols=33 Identities=24% Similarity=0.120 Sum_probs=30.5
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCc
Q 021928 99 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK 132 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 132 (305)
|+|+|.|| |..|...+.+|.++|++|.++-+++
T Consensus 1 m~V~IIGa-G~aGL~aA~~L~~~G~~V~vlE~~~ 33 (347)
T d2ivda1 1 MNVAVVGG-GISGLAVAHHLRSRGTDAVLLESSA 33 (347)
T ss_dssp CCEEEECC-BHHHHHHHHHHHTTTCCEEEECSSS
T ss_pred CeEEEECC-CHHHHHHHHHHHhCCCCEEEEecCC
Confidence 67999998 9999999999999999999998764
|
| >d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Phosphoglycerate dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=92.88 E-value=0.049 Score=43.33 Aligned_cols=61 Identities=7% Similarity=-0.032 Sum_probs=45.6
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEEC
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 169 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~ 169 (305)
..++|.|.|. |.||+.+++.|...|.+|+..++....... . .. . + +.++++++.+|+|+++
T Consensus 43 ~~~~vgiiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~~---~-~~--~--~---~~l~ell~~sDii~i~ 103 (188)
T d1sc6a1 43 RGKKLGIIGY-GHIGTQLGILAESLGMYVYFYDIENKLPLG---N-AT--Q--V---QHLSDLLNMSDVVSLH 103 (188)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCCCCT---T-CE--E--C---SCHHHHHHHCSEEEEC
T ss_pred cceEEEEeec-ccchhhhhhhcccccceEeeccccccchhh---h-hh--h--h---hhHHHHHhhccceeec
Confidence 4599999985 999999999999999999999876432211 1 11 1 1 3566788889999966
|
| >d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase species: Escherichia coli [TaxId: 562]
Probab=92.81 E-value=0.21 Score=38.22 Aligned_cols=34 Identities=18% Similarity=0.189 Sum_probs=28.4
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhC--CCeEEEEEcC
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVK--RTRIKALVKD 131 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~R~ 131 (305)
||+|.|.|+||.||.....-+.+. .++|++++=.
T Consensus 1 MK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~ 36 (151)
T d1q0qa2 1 MKQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAG 36 (151)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEES
T ss_pred CCeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEec
Confidence 578999999999999999888765 4788887643
|
| >d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]
Probab=92.50 E-value=0.065 Score=40.86 Aligned_cols=34 Identities=12% Similarity=0.174 Sum_probs=29.4
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCC--eEEEEEcCc
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRT--RIKALVKDK 132 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~R~~ 132 (305)
+|+|+|.|| |++|-+++..|.+.++ +|+++.+++
T Consensus 2 gkrivIvGg-G~~G~e~A~~l~~~~~~~~Vtlie~~~ 37 (186)
T d1fcda1 2 GRKVVVVGG-GTGGATAAKYIKLADPSIEVTLIEPNT 37 (186)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred CCcEEEECc-cHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence 589999998 9999999999999885 677777665
|
| >d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Trimethylamine dehydrogenase, middle domain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=92.47 E-value=0.09 Score=42.73 Aligned_cols=37 Identities=14% Similarity=0.185 Sum_probs=33.3
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCc
Q 021928 95 PEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK 132 (305)
Q Consensus 95 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 132 (305)
....++|+|.|| |..|...+.+|.++|++|.++.++.
T Consensus 46 ~~~~k~VvIIGa-GpAGl~aA~~l~~~G~~v~l~E~~~ 82 (233)
T d1djqa3 46 TKNKDSVLIVGA-GPSGSEAARVLMESGYTVHLTDTAE 82 (233)
T ss_dssp CSSCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred ccCCceEEEEcc-cHHHHHHHHHHHHhccceeeEeecc
Confidence 346799999998 9999999999999999999998765
|
| >d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Alpha-glucosidase AglA species: Thermotoga maritima [TaxId: 2336]
Probab=92.43 E-value=0.18 Score=39.26 Aligned_cols=67 Identities=7% Similarity=0.017 Sum_probs=43.7
Q ss_pred CCCEEEEEcCCChHHHH--HHHHHHhC----CCeEEEEEcCcchhhh----------hcCCCcEEeecCCCCHHHHHHHh
Q 021928 97 ARDAVLVTDGDSDIGQM--VILSLIVK----RTRIKALVKDKRNAME----------SFGTYVESMAGDASNKKFLKTAL 160 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~--l~~~L~~~----g~~V~~~~R~~~~~~~----------~~~~~v~~v~~D~~d~~~~~~~~ 160 (305)
+.|+|.|.|| |.+|.. ++..|+.. +.++++++.++++... .++...++... .+.++++
T Consensus 1 p~mKI~iIGa-Gsvg~t~~~~~~l~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~i~~~-----td~~eaL 74 (171)
T d1obba1 1 PSVKIGIIGA-GSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEKT-----MNLDDVI 74 (171)
T ss_dssp CCCEEEEETT-TCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEEE-----SCHHHHH
T ss_pred CCcEEEEECC-CHHHhHHHHHHHHHhccccCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCCeEEEEe-----CChhhcc
Confidence 4689999997 888865 34445432 4599999999876321 12223333222 2356789
Q ss_pred cCccEEEEC
Q 021928 161 RGVRSIICP 169 (305)
Q Consensus 161 ~~~d~Vi~~ 169 (305)
.++|.|+++
T Consensus 75 ~dad~Vv~~ 83 (171)
T d1obba1 75 IDADFVINT 83 (171)
T ss_dssp TTCSEEEEC
T ss_pred cCCCeEeee
Confidence 999999987
|
| >d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Lysine-specific histone demethylase 1, LSD1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=92.39 E-value=0.082 Score=43.74 Aligned_cols=36 Identities=11% Similarity=0.063 Sum_probs=31.7
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCc
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK 132 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 132 (305)
.+..+|+|.|| |.-|...+.+|.++|++|.++-++.
T Consensus 3 ~~~~kViVIGa-G~aGL~aA~~L~~~G~~V~VlEa~~ 38 (449)
T d2dw4a2 3 KKTGKVIIIGS-GVSGLAAARQLQSFGMDVTLLEARD 38 (449)
T ss_dssp SCCCEEEEECC-BHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CCCCcEEEECC-CHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 45678999998 9999999999999999999986543
|
| >d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Cod (Gadus callarias) [TaxId: 8053]
Probab=92.35 E-value=0.15 Score=39.40 Aligned_cols=75 Identities=16% Similarity=0.140 Sum_probs=47.4
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcchhhh--hcCCCcEEeec-CCCC-HHHHHHHh--cCccEEEE
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAME--SFGTYVESMAG-DASN-KKFLKTAL--RGVRSIIC 168 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~--~~~~~v~~v~~-D~~d-~~~~~~~~--~~~d~Vi~ 168 (305)
.++.+|+|+|+ |.+|...+.++...|. +|+++++++++.+. .++. .+++-. +-.+ .+.+.+.. .++|+++-
T Consensus 27 k~g~~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~~~GA-d~~in~~~~~~~~~~~~~~~~~~G~d~vid 104 (175)
T d1cdoa2 27 EPGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGA-TDFVNPNDHSEPISQVLSKMTNGGVDFSLE 104 (175)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTC-CEEECGGGCSSCHHHHHHHHHTSCBSEEEE
T ss_pred CCCCEEEEEec-CCccchHHHHHHHHhhchheeecchHHHHHHHHHcCC-cEEEcCCCcchhHHHHHHhhccCCcceeee
Confidence 35689999997 7788888888888886 68888888776432 2332 223221 1111 23344433 47899997
Q ss_pred CCcc
Q 021928 169 PSEG 172 (305)
Q Consensus 169 ~~~g 172 (305)
+.++
T Consensus 105 ~~G~ 108 (175)
T d1cdoa2 105 CVGN 108 (175)
T ss_dssp CSCC
T ss_pred ecCC
Confidence 7543
|
| >d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Diaminopimelic acid dehydrogenase (DAPDH) species: Corynebacterium glutamicum [TaxId: 1718]
Probab=92.30 E-value=0.08 Score=41.17 Aligned_cols=64 Identities=6% Similarity=0.011 Sum_probs=40.0
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhC-CCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEECCc
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVK-RTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE 171 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~ 171 (305)
+.+|.|.|. |.+|+.+++.|.+. +.+++++.......... ..... ..+......++|+|+.+++
T Consensus 3 kirvgiiG~-G~ig~~~~~~l~~~~~~elvav~~~~~~~~~~----~~~~~-----~~~~~~~~~~~D~Vvi~tp 67 (170)
T d1f06a1 3 NIRVAIVGY-GNLGRSVEKLIAKQPDMDLVGIFSRRATLDTK----TPVFD-----VADVDKHADDVDVLFLCMG 67 (170)
T ss_dssp CEEEEEECC-SHHHHHHHHHHTTCSSEEEEEEEESSSCCSSS----SCEEE-----GGGGGGTTTTCSEEEECSC
T ss_pred cceEEEECC-hHHHHHHHHHHHhCCCcEEEEEEecccccccc----ccccc-----chhhhhhccccceEEEeCC
Confidence 468999995 99999999999875 56888765443222111 11111 1223345567888887744
|
| >d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: 2,4-dienoyl-CoA reductase species: Yeast (Candida tropicalis) [TaxId: 5482]
Probab=92.27 E-value=0.08 Score=41.83 Aligned_cols=94 Identities=10% Similarity=0.133 Sum_probs=55.2
Q ss_pred CCEEEE-EcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh------hcCCCcEEeec---CCCC-HHHHHHHh----cC
Q 021928 98 RDAVLV-TDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAG---DASN-KKFLKTAL----RG 162 (305)
Q Consensus 98 ~~~vlV-tGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~------~~~~~v~~v~~---D~~d-~~~~~~~~----~~ 162 (305)
+.+|+| +||+|.+|...++-....|.+|++++|+.++..+ .++. -.++.. |..+ .+.+.+.. .+
T Consensus 29 g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~~~~~~lGa-d~vi~~~~~~~~~~~~~v~~~~~~~g~~ 107 (189)
T d1gu7a2 29 GKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGA-TQVITEDQNNSREFGPTIKEWIKQSGGE 107 (189)
T ss_dssp TTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTC-SEEEEHHHHHCGGGHHHHHHHHHHHTCC
T ss_pred CCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccchHHhhhhhccc-cEEEeccccchhHHHHHHHHHHhhccCC
Confidence 456666 5999999999999888899999999988655322 2232 122221 2222 12233322 46
Q ss_pred ccEEEECCcch-Hhhhhhh-cCCCEEEEEccc
Q 021928 163 VRSIICPSEGF-ISNAGSL-KGVQHVILLSQL 192 (305)
Q Consensus 163 ~d~Vi~~~~g~-~~~~a~~-~gv~~~V~iSS~ 192 (305)
+|+|+.+.++. .....+. ..-.++|.+..+
T Consensus 108 vdvv~D~vg~~~~~~~~~~l~~~G~~v~~G~~ 139 (189)
T d1gu7a2 108 AKLALNCVGGKSSTGIARKLNNNGLMLTYGGM 139 (189)
T ss_dssp EEEEEESSCHHHHHHHHHTSCTTCEEEECCCC
T ss_pred ceEEEECCCcchhhhhhhhhcCCcEEEEECCc
Confidence 89999875543 2222221 122478877644
|
| >d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: C-terminal domain of adrenodoxin reductase-like domain: Trimethylamine dehydrogenase, C-terminal domain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=92.19 E-value=0.11 Score=39.45 Aligned_cols=37 Identities=5% Similarity=0.004 Sum_probs=30.7
Q ss_pred CCCEEEEEc-CCChHHHHHHHHHHhCCCeEEEEEcCcc
Q 021928 97 ARDAVLVTD-GDSDIGQMVILSLIVKRTRIKALVKDKR 133 (305)
Q Consensus 97 ~~~~vlVtG-atG~iG~~l~~~L~~~g~~V~~~~R~~~ 133 (305)
+.+.++|.+ +.|+||.+++..|+++|.+|.++.+.+.
T Consensus 38 ~~~~vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~~~~ 75 (156)
T d1djqa2 38 IGKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVHL 75 (156)
T ss_dssp CCSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSCT
T ss_pred cCCceEEEecCCChHHHHHHHHHHHcCCeEEEEecCCc
Confidence 456777762 4599999999999999999999998763
|
| >d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Ubiquitin activating enzymes (UBA) domain: UBA3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=92.12 E-value=0.077 Score=47.81 Aligned_cols=72 Identities=17% Similarity=0.180 Sum_probs=49.1
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcch---h-------------------h---hhcCC--CcEEeecC
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRN---A-------------------M---ESFGT--YVESMAGD 149 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~---~-------------------~---~~~~~--~v~~v~~D 149 (305)
..+|||.|+ |++|.++++.|+..|. ++.+++.+.-. . . ..+.+ ++..+..+
T Consensus 37 ~~kVlvvG~-GglG~ei~k~L~~~Gvg~i~lvD~D~Ve~sNL~RQflf~~~diG~~Ka~~a~~~l~~~np~v~i~~~~~~ 115 (426)
T d1yovb1 37 TCKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNCNVVPHFNK 115 (426)
T ss_dssp HCCEEEECS-STTHHHHHHHHHTTTCCCEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHSTTCCCEEECSC
T ss_pred cCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEECCCcchhhhcccccCChhHcCcHHHHHHHHHHHhhCCCCceEeeecc
Confidence 479999998 7799999999999997 78777654211 0 0 01122 45555555
Q ss_pred CCCHHHHHHHhcCccEEEECCcc
Q 021928 150 ASNKKFLKTALRGVRSIICPSEG 172 (305)
Q Consensus 150 ~~d~~~~~~~~~~~d~Vi~~~~g 172 (305)
+.+.. ...++++|.||.+...
T Consensus 116 i~~~~--~~~~~~~DlVi~~~Dn 136 (426)
T d1yovb1 116 IQDFN--DTFYRQFHIIVCGLDS 136 (426)
T ss_dssp GGGBC--HHHHTTCSEEEECCSC
T ss_pred ccchH--HHHHHhcchheeccCc
Confidence 55432 3578899999988553
|
| >d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Trypanothione reductase species: Crithidia fasciculata [TaxId: 5656]
Probab=92.10 E-value=0.12 Score=37.39 Aligned_cols=38 Identities=13% Similarity=0.117 Sum_probs=30.9
Q ss_pred CcCCCCEEEEEcCCChHHHHHHHHHHh---CCCeEEEEEcCc
Q 021928 94 FPEARDAVLVTDGDSDIGQMVILSLIV---KRTRIKALVKDK 132 (305)
Q Consensus 94 ~~~~~~~vlVtGatG~iG~~l~~~L~~---~g~~V~~~~R~~ 132 (305)
++..+++++|.|| |++|-+++..|.+ .|.+|.++.|.+
T Consensus 14 l~~~p~~v~IiGg-G~ig~E~A~~l~~~~~~g~~Vtli~~~~ 54 (117)
T d1feca2 14 LDEAPKRALCVGG-GYISIEFAGIFNAYKARGGQVDLAYRGD 54 (117)
T ss_dssp CSSCCSEEEEECS-SHHHHHHHHHHHHHSCTTCEEEEEESSS
T ss_pred ccccCCeEEEECC-ChHHHHHHHHhHhhcccccccceecccc
Confidence 3445689999998 9999999976554 588999999876
|
| >d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Trypanothione reductase species: Trypanosoma cruzi [TaxId: 5693]
Probab=92.07 E-value=0.11 Score=37.63 Aligned_cols=37 Identities=19% Similarity=0.162 Sum_probs=29.6
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHH---hCCCeEEEEEcCc
Q 021928 95 PEARDAVLVTDGDSDIGQMVILSLI---VKRTRIKALVKDK 132 (305)
Q Consensus 95 ~~~~~~vlVtGatG~iG~~l~~~L~---~~g~~V~~~~R~~ 132 (305)
+..+++++|.|| |++|-+++..|. .+|.+|.++.|.+
T Consensus 17 ~~~p~~v~ivGg-G~ig~E~A~~l~~l~~~~~~Vtli~~~~ 56 (117)
T d1aoga2 17 PEPPRRVLTVGG-GFISVEFAGIFNAYKPKDGQVTLCYRGE 56 (117)
T ss_dssp SSCCSEEEEECS-SHHHHHHHHHHHHHCCTTCEEEEEESSS
T ss_pred hhcCCeEEEECC-cHHHHHHHHHhhhcccCCcEEEEEeccc
Confidence 445689999998 999999996555 4556899998865
|
| >d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramate-alanine ligase MurC species: Thermotoga maritima [TaxId: 2336]
Probab=92.07 E-value=0.31 Score=33.69 Aligned_cols=79 Identities=8% Similarity=-0.031 Sum_probs=51.9
Q ss_pred CEEEEEcCCChHHH-HHHHHHHhCCCeEEEEEcCcchhhh-hcCCCcEEeecCCCCHHHHHHHhcCccEEEECC----cc
Q 021928 99 DAVLVTDGDSDIGQ-MVILSLIVKRTRIKALVKDKRNAME-SFGTYVESMAGDASNKKFLKTALRGVRSIICPS----EG 172 (305)
Q Consensus 99 ~~vlVtGatG~iG~-~l~~~L~~~g~~V~~~~R~~~~~~~-~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~----~g 172 (305)
|+|-+.|- |++|. .|++.|.++|++|.+-++......+ +...++++..+. +.+ -+.+.|.||... ..
T Consensus 2 ~~ihfiGI-gG~GMs~LA~~L~~~G~~VsGSD~~~~~~t~~L~~~Gi~i~~gh--~~~----~i~~~d~vV~SsAI~~~n 74 (89)
T d1j6ua1 2 MKIHFVGI-GGIGMSAVALHEFSNGNDVYGSNIEETERTAYLRKLGIPIFVPH--SAD----NWYDPDLVIKTPAVRDDN 74 (89)
T ss_dssp CEEEEETT-TSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHTTCCEESSC--CTT----SCCCCSEEEECTTCCTTC
T ss_pred cEEEEEeE-CHHHHHHHHHHHHhCCCeEEEEeCCCChhHHHHHHCCCeEEeee--ccc----ccCCCCEEEEecCcCCCC
Confidence 78889987 45665 7899999999999999888654322 222345555441 211 146789988762 23
Q ss_pred hHhhhhhhcCCC
Q 021928 173 FISNAGSLKGVQ 184 (305)
Q Consensus 173 ~~~~~a~~~gv~ 184 (305)
....+|++.|++
T Consensus 75 pel~~A~~~gIp 86 (89)
T d1j6ua1 75 PEIVRARMERVP 86 (89)
T ss_dssp HHHHHHHHTTCC
T ss_pred HHHHHHHHcCCC
Confidence 455667777764
|
| >d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=91.78 E-value=0.28 Score=38.27 Aligned_cols=77 Identities=9% Similarity=0.042 Sum_probs=52.0
Q ss_pred cCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCC--CcEEeecCC--CCHHHHHHHhcCccEEEECC
Q 021928 95 PEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGT--YVESMAGDA--SNKKFLKTALRGVRSIICPS 170 (305)
Q Consensus 95 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~--~v~~v~~D~--~d~~~~~~~~~~~d~Vi~~~ 170 (305)
+..+|+|+|.|-+.-+|+-++..|+++|..|..+..+.......... -......|+ ...+.+++....+|+||.+.
T Consensus 26 ~l~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lk~~~~~aDIvIsav 105 (171)
T d1edza1 26 RLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLKLNKHHVEDLGEYSEDLLKKCSLDSDVVITGV 105 (171)
T ss_dssp TTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSSCCCCEEEEEEECCHHHHHHHHHHCSEEEECC
T ss_pred CCCCCEEEEECCccccHHHHHHHHHHCCCEEEEeccccccccccccceeeeeeccccccccchhHHhhccccCCEEEEcc
Confidence 34569999999999999999999999999998765543221111000 001111222 24577888999999999884
Q ss_pred c
Q 021928 171 E 171 (305)
Q Consensus 171 ~ 171 (305)
+
T Consensus 106 G 106 (171)
T d1edza1 106 P 106 (171)
T ss_dssp C
T ss_pred C
Confidence 3
|
| >d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=91.66 E-value=0.067 Score=42.29 Aligned_cols=91 Identities=10% Similarity=0.057 Sum_probs=51.8
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCC-CeEEEEEcCcch-hhh-hcCCCcEEee----------cCCCCHHHHHHHhcCccE
Q 021928 99 DAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRN-AME-SFGTYVESMA----------GDASNKKFLKTALRGVRS 165 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~R~~~~-~~~-~~~~~v~~v~----------~D~~d~~~~~~~~~~~d~ 165 (305)
-+|.|-| .|-||+.++|.|.+++ .+|+++...... ... .......... ..+.-...+..++.++|+
T Consensus 2 IKVaING-fGRIGR~v~Ral~~~~dievVaInd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~g~~~~~~~~vDi 80 (178)
T d1b7go1 2 VNVAVNG-YGTIGKRVADAIIKQPDMKLVGVAKTSPNYEAFIAHRRGIRIYVPQQSIKKFEESGIPVAGTVEDLIKTSDI 80 (178)
T ss_dssp EEEEEEC-CSHHHHHHHHHHHTCTTEEEEEEECSSCSHHHHHHHHTTCCEECCGGGHHHHHTTTCCCCCCHHHHHHHCSE
T ss_pred eEEEEEC-CCHHHHHHHHHHHhCCCCEEEEEECCCCcHHHHHhcccCcceeccCccceeccccceecCCchhhhhhcCCE
Confidence 4799998 6999999999999875 688888654322 111 1000000000 011111234455678999
Q ss_pred EEECCcchH----hhhhhhcCCCEEEEEcc
Q 021928 166 IICPSEGFI----SNAGSLKGVQHVILLSQ 191 (305)
Q Consensus 166 Vi~~~~g~~----~~~a~~~gv~~~V~iSS 191 (305)
|+-|++.+. +....+.| +++|+.++
T Consensus 81 ViecTG~f~~~e~a~~hl~~G-~KvIi~~~ 109 (178)
T d1b7go1 81 VVDTTPNGVGAQYKPIYLQLQ-RNAIFQGG 109 (178)
T ss_dssp EEECCSTTHHHHHHHHHHHTT-CEEEECTT
T ss_pred EEECCCCcCCHHHHHHHHHcC-CEEEEECC
Confidence 998866542 22233466 56776544
|
| >d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Human (Homo sapiens) [TaxId: 9606]
Probab=91.66 E-value=0.24 Score=38.61 Aligned_cols=37 Identities=11% Similarity=0.056 Sum_probs=33.0
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCc
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK 132 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 132 (305)
..+|+|+|.|.+.-+|+.++..|+++|..|..+....
T Consensus 37 l~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t 73 (170)
T d1a4ia1 37 IAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKT 73 (170)
T ss_dssp CTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC
T ss_pred cccceEEEEecCCccchHHHHHHHhccCceEEEeccc
Confidence 4569999999999999999999999999999876654
|
| >d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: p-Hydroxybenzoate hydroxylase, PHBH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=91.63 E-value=0.059 Score=44.93 Aligned_cols=35 Identities=11% Similarity=0.045 Sum_probs=31.9
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcc
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR 133 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~ 133 (305)
+.+|+|.|| |-.|..++..|.+.|++|.++.|+++
T Consensus 2 k~~V~IvGa-Gp~Gl~~A~~L~~~G~~v~vlE~~~~ 36 (292)
T d1k0ia1 2 KTQVAIIGA-GPSGLLLGQLLHKAGIDNVILERQTP 36 (292)
T ss_dssp BCSEEEECC-SHHHHHHHHHHHHHTCCEEEECSSCH
T ss_pred CCCEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 347999998 89999999999999999999998864
|
| >d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: GDI-like N domain domain: Guanine nucleotide dissociation inhibitor, GDI species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=91.31 E-value=0.097 Score=41.23 Aligned_cols=31 Identities=16% Similarity=0.096 Sum_probs=29.0
Q ss_pred EEEEcCCChHHHHHHHHHHhCCCeEEEEEcCc
Q 021928 101 VLVTDGDSDIGQMVILSLIVKRTRIKALVKDK 132 (305)
Q Consensus 101 vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 132 (305)
|+|.|| |..|...+..|+++|++|.++.+++
T Consensus 8 viViGa-G~~Gl~~A~~La~~G~~V~vlE~~~ 38 (297)
T d2bcgg1 8 VIVLGT-GITECILSGLLSVDGKKVLHIDKQD 38 (297)
T ss_dssp EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred EEEECc-CHHHHHHHHHHHHCCCCEEEEcCCC
Confidence 899996 9999999999999999999998875
|
| >d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Escherichia coli [TaxId: 562]
Probab=91.06 E-value=0.17 Score=39.33 Aligned_cols=54 Identities=9% Similarity=0.123 Sum_probs=41.9
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEECC
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS 170 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~ 170 (305)
..+|+|+|.|-+.-+|+.++..|.++|++|+.+..... .+.+..+.+|+||.+.
T Consensus 35 l~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t~---------------------~l~~~~~~ADivI~a~ 88 (166)
T d1b0aa1 35 TFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTK---------------------NLRHHVENADLLIVAV 88 (166)
T ss_dssp CTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCS---------------------CHHHHHHHCSEEEECS
T ss_pred cccceEEEEeccccccHHHHHHHHHhhccccccccccc---------------------hhHHHHhhhhHhhhhc
Confidence 45699999999999999999999999999987654331 1334456778888773
|
| >d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Putidaredoxin reductase species: Pseudomonas putida [TaxId: 303]
Probab=91.00 E-value=0.13 Score=39.61 Aligned_cols=34 Identities=15% Similarity=0.075 Sum_probs=29.0
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCc
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK 132 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 132 (305)
.++|+|.|| |++|-+++..|.+.|.+|.++.+.+
T Consensus 3 ~~~VvIIGg-G~~G~e~A~~l~~~g~~v~v~~~~~ 36 (185)
T d1q1ra1 3 NDNVVIVGT-GLAGVEVAFGLRASGWEGNIRLVGD 36 (185)
T ss_dssp SCEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECS
T ss_pred CCCEEEECC-cHHHHHHHHHHHHcCCceEEEEecC
Confidence 589999998 9999999999999998876665544
|
| >d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains species: Escherichia coli [TaxId: 562]
Probab=90.85 E-value=0.54 Score=34.31 Aligned_cols=73 Identities=10% Similarity=0.043 Sum_probs=50.9
Q ss_pred CCEEEEEcCC----------ChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcC--CCcEEeecCCCCHHHHHHHh--cCc
Q 021928 98 RDAVLVTDGD----------SDIGQMVILSLIVKRTRIKALVKDKRNAMESFG--TYVESMAGDASNKKFLKTAL--RGV 163 (305)
Q Consensus 98 ~~~vlVtGat----------G~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~--~~v~~v~~D~~d~~~~~~~~--~~~ 163 (305)
.++|||.|+. .+.+.+.++.|.+.|++++.+.-+|+.....+. +++-+-+. ..+.+.+.+ +..
T Consensus 4 ~kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~g~~~IliN~NPeTVstd~d~aD~lYfepl---t~e~v~~Ii~~E~p 80 (121)
T d1a9xa4 4 REKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTDYDTSDRLYFEPV---TLEDVLEIVRIEKP 80 (121)
T ss_dssp SCEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHTTCEEEEECCCTTSSTTSTTSSSEEECCCC---SHHHHHHHHHHHCC
T ss_pred CCEEEEECCCcCcccccchhhHHHHHHHHHHHhcCCeEEEEecChhhhhcChhhcCceEEccC---CHHHHHHHHHHhCC
Confidence 4899999983 367889999999999999999999877433222 22222222 446666655 467
Q ss_pred cEEEECCcch
Q 021928 164 RSIICPSEGF 173 (305)
Q Consensus 164 d~Vi~~~~g~ 173 (305)
|.|+...+|.
T Consensus 81 ~~ii~~~GGQ 90 (121)
T d1a9xa4 81 KGVIVQYGGQ 90 (121)
T ss_dssp SEEECSSSTH
T ss_pred CEEEeehhhh
Confidence 9999875554
|
| >d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hypothetical protein TM1727 species: Thermotoga maritima [TaxId: 2336]
Probab=90.38 E-value=0.042 Score=41.74 Aligned_cols=72 Identities=10% Similarity=0.035 Sum_probs=38.8
Q ss_pred EEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEEC-CcchHhhhhh
Q 021928 101 VLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP-SEGFISNAGS 179 (305)
Q Consensus 101 vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~-~~g~~~~~a~ 179 (305)
|-+.| +|.+|+++++.|.+.++.+.+..|++++..++...... ...+ ..++++.+|+||.+ .+..+.+.+.
T Consensus 2 IgfIG-~G~mg~~l~~~L~~~~~~~~v~~R~~~~~~~l~~~~~~-~~~~------~~~~~~~~DiVil~v~d~~i~~v~~ 73 (153)
T d2i76a2 2 LNFVG-TGTLTRFFLECLKDRYEIGYILSRSIDRARNLAEVYGG-KAAT------LEKHPELNGVVFVIVPDRYIKTVAN 73 (153)
T ss_dssp CEEES-CCHHHHHHHHTTC----CCCEECSSHHHHHHHHHHTCC-CCCS------SCCCCC---CEEECSCTTTHHHHHT
T ss_pred EEEEe-CcHHHHHHHHHHHhCCCEEEEEeCChhhhcchhhcccc-cccc------hhhhhccCcEEEEeccchhhhHHHh
Confidence 34566 49999999998866444445788998875543221111 1112 23467788999988 4444544444
Q ss_pred h
Q 021928 180 L 180 (305)
Q Consensus 180 ~ 180 (305)
+
T Consensus 74 ~ 74 (153)
T d2i76a2 74 H 74 (153)
T ss_dssp T
T ss_pred h
Confidence 3
|
| >d1kifa1 c.4.1.2 (A:1-194,A:288-339) D-aminoacid oxidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: D-aminoacid oxidase, N-terminal domain domain: D-aminoacid oxidase, N-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=90.34 E-value=0.023 Score=45.94 Aligned_cols=26 Identities=19% Similarity=0.202 Sum_probs=24.0
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCCeE
Q 021928 99 DAVLVTDGDSDIGQMVILSLIVKRTRI 125 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~~~g~~V 125 (305)
|+|+|.|| |-+|..++.+|+++|++|
T Consensus 1 mkV~VIGa-Gi~GlstA~~L~~~G~~v 26 (246)
T d1kifa1 1 MRVVVIGA-GVIGLSTALCIHERYHSV 26 (246)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHHTTT
T ss_pred CEEEEECc-hHHHHHHHHHHHHCCCCc
Confidence 68999998 999999999999999764
|
| >d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Monooxygenase PhzS species: Pseudomonas aeruginosa [TaxId: 287]
Probab=90.33 E-value=0.18 Score=41.04 Aligned_cols=35 Identities=14% Similarity=0.122 Sum_probs=31.0
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcc
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKR 133 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~ 133 (305)
+++|+|.|| |..|..++..|.+.|. +|.++.|.+.
T Consensus 1 ~~~V~IvGa-G~aGl~~A~~L~~~Gi~~V~V~Er~~~ 36 (288)
T d3c96a1 1 PIDILIAGA-GIGGLSCALALHQAGIGKVTLLESSSE 36 (288)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESSSS
T ss_pred CCEEEEECc-CHHHHHHHHHHHhCCCCeEEEEeCCCC
Confidence 478999998 9999999999999995 8888888763
|
| >d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Ubiquitin activating enzymes (UBA) domain: Amyloid beta precursor protein-binding protein 1, APPBP1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=90.30 E-value=0.43 Score=43.88 Aligned_cols=96 Identities=6% Similarity=0.101 Sum_probs=58.0
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcch---h----------------------hhhcCCCcE--EeecC
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRN---A----------------------MESFGTYVE--SMAGD 149 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~---~----------------------~~~~~~~v~--~v~~D 149 (305)
..+|+|.|+ |++|.++++.|+..|. ++++++.+.-. . ...+.+.++ ++..+
T Consensus 25 ~s~VlvvG~-gglG~Ei~knLvl~GVg~itivD~d~v~~sdL~rqf~~~~~diGk~ka~~~~~~L~~lNp~v~i~~~~~~ 103 (529)
T d1yova1 25 SAHVCLINA-TATGTEILKNLVLPGIGSFTIIDGNQVSGEDAGNNFFLQRSSIGKNRAEAAMEFLQELNSDVSGSFVEES 103 (529)
T ss_dssp HCEEEECCC-SHHHHHHHHHHHTTTCSEEEEECCSBCCHHHHHHCTTCCGGGTTSBHHHHHHHHHHTTCTTSBCCEESSC
T ss_pred CCCEEEECC-CHHHHHHHHHHHHhcCCEEEEEcCCcCChhhcCchhcCChhhCCCHHHHHHHHHHHHhCCCCcEEEEcCC
Confidence 479999997 8899999999999996 67776543211 0 011223333 33333
Q ss_pred CCCH-HHHHHHhcCccEEEECCcc-----hHhhhhhhcCCCEEEEEcccccc
Q 021928 150 ASNK-KFLKTALRGVRSIICPSEG-----FISNAGSLKGVQHVILLSQLSVY 195 (305)
Q Consensus 150 ~~d~-~~~~~~~~~~d~Vi~~~~g-----~~~~~a~~~gv~~~V~iSS~~~~ 195 (305)
..+. +.-...+.++|+||.+... .+.+.|++.+++ +|...+.+.+
T Consensus 104 ~~~~~~~~~~~~~~~dvVv~~~~~~~~~~~l~~~c~~~~ip-~i~~~~~G~~ 154 (529)
T d1yova1 104 PENLLDNDPSFFCRFTVVVATQLPESTSLRLADVLWNSQIP-LLICRTYGLV 154 (529)
T ss_dssp HHHHHHSCGGGGGGCSEEEEESCCHHHHHHHHHHHHHHTCC-EEEEEEETTE
T ss_pred chhhhhhHHHHhcCCCEEEECCCCHHHHHHHHHHHHHcCCC-EEEEeccCCE
Confidence 2211 1112457789999977332 256677777775 6666555443
|
| >d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: UDP-glucose dehydrogenase (UDPGDH) species: Streptococcus pyogenes [TaxId: 1314]
Probab=90.25 E-value=0.12 Score=40.75 Aligned_cols=36 Identities=8% Similarity=0.003 Sum_probs=30.1
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhh
Q 021928 99 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM 136 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~ 136 (305)
|+|.|.| .|++|..++..| ++|++|++++-++.+..
T Consensus 1 MkI~ViG-lG~vGl~~a~~~-a~g~~V~g~Din~~~v~ 36 (196)
T d1dlja2 1 MKIAVAG-SGYVGLSLGVLL-SLQNEVTIVDILPSKVD 36 (196)
T ss_dssp CEEEEEC-CSHHHHHHHHHH-TTTSEEEEECSCHHHHH
T ss_pred CEEEEEC-CChhHHHHHHHH-HCCCcEEEEECCHHHHH
Confidence 7899997 599999998755 57999999998876643
|
| >d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Sarcosine oxidase species: Bacillus sp., strain b0618 [TaxId: 1409]
Probab=90.15 E-value=0.14 Score=42.37 Aligned_cols=32 Identities=13% Similarity=0.099 Sum_probs=29.3
Q ss_pred EEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCc
Q 021928 100 AVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK 132 (305)
Q Consensus 100 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 132 (305)
-|+|.|| |.+|..++.+|+++|++|+++.+..
T Consensus 5 DvvIIGa-Gi~Gls~A~~La~~G~~V~viE~~~ 36 (281)
T d2gf3a1 5 DVIVVGA-GSMGMAAGYQLAKQGVKTLLVDAFD 36 (281)
T ss_dssp EEEEECC-SHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred CEEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 3899998 9999999999999999999998864
|
| >d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: UDP-galactopyranose mutase, N-terminal domain domain: UDP-galactopyranose mutase, N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=90.07 E-value=0.12 Score=43.79 Aligned_cols=34 Identities=9% Similarity=0.092 Sum_probs=30.6
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCc
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK 132 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 132 (305)
|..|+|.|| |..|..++++|++.|++|.++.++.
T Consensus 1 M~dv~IIGa-G~sGl~~A~~L~~~g~~V~iiEk~~ 34 (298)
T d1i8ta1 1 MYDYIIVGS-GLFGAVCANELKKLNKKVLVIEKRN 34 (298)
T ss_dssp CEEEEEECC-SHHHHHHHHHHGGGTCCEEEECSSS
T ss_pred CccEEEECC-cHHHHHHHHHHHhCCCcEEEEECCC
Confidence 357999998 9999999999999999999998764
|
| >d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Cow (Bos taurus) [TaxId: 9913]
Probab=89.89 E-value=1.3 Score=37.24 Aligned_cols=35 Identities=11% Similarity=0.044 Sum_probs=31.4
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCc
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK 132 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 132 (305)
.+++|+|-|- |.+|+++++.|.+.|.+|++++...
T Consensus 35 ~gktvaIqGf-GnVG~~~A~~L~e~Gakvv~vsD~~ 69 (293)
T d1hwxa1 35 GDKTFAVQGF-GNVGLHSMRYLHRFGAKCVAVGESD 69 (293)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEEETT
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEEccc
Confidence 4599999996 9999999999999999999987653
|
| >d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavin-dependent monoxygenase SPBP16F5.08c species: Schizosaccharomyces pombe [TaxId: 4896]
Probab=89.47 E-value=0.19 Score=42.95 Aligned_cols=35 Identities=6% Similarity=0.201 Sum_probs=30.9
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCC--CeEEEEEcCc
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDK 132 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g--~~V~~~~R~~ 132 (305)
++|+|+|.|| |.-|...+..|++.| ++|+++.|+.
T Consensus 3 ~~KrVaIIGa-G~sGl~~A~~L~~~~~~~~v~vfEk~~ 39 (335)
T d2gv8a1 3 TIRKIAIIGA-GPSGLVTAKALLAEKAFDQVTLFERRG 39 (335)
T ss_dssp SCCEEEEECC-SHHHHHHHHHHHTTTCCSEEEEECSSS
T ss_pred CCCeEEEECc-CHHHHHHHHHHHHhCCCCCEEEEECCC
Confidence 4689999998 999999999999877 5999998875
|
| >d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: N,N-dimethylglycine oxidase species: Arthrobacter globiformis [TaxId: 1665]
Probab=89.27 E-value=0.18 Score=42.12 Aligned_cols=32 Identities=13% Similarity=0.216 Sum_probs=29.0
Q ss_pred EEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCc
Q 021928 100 AVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDK 132 (305)
Q Consensus 100 ~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~ 132 (305)
+|+|.|| |-+|..++.+|+++|. +|.++.|+.
T Consensus 3 dViIIGa-Gi~G~s~A~~La~~G~~~V~liE~~~ 35 (305)
T d1pj5a2 3 RIVIIGA-GIVGTNLADELVTRGWNNITVLDQGP 35 (305)
T ss_dssp CEEEECC-SHHHHHHHHHHHHTTCCCEEEECSSC
T ss_pred CEEEECc-CHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence 6999998 9999999999999996 699998874
|
| >d1d7ya1 c.3.1.5 (A:5-115,A:237-308) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent ferredoxin reductase, BphA4 species: Pseudomonas sp., KKS102 [TaxId: 306]
Probab=89.01 E-value=0.096 Score=40.67 Aligned_cols=33 Identities=12% Similarity=-0.038 Sum_probs=27.1
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEc
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVK 130 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R 130 (305)
++.+|+|.|| |++|-+++..|.+.|.++.++.+
T Consensus 2 m~a~VvIIGg-G~~G~e~A~~l~~~g~~v~i~~~ 34 (183)
T d1d7ya1 2 LKAPVVVLGA-GLASVSFVAELRQAGYQGLITVV 34 (183)
T ss_dssp CCSSEEEECC-SHHHHHHHHHHHHHTCCSCEEEE
T ss_pred CCCCEEEECc-cHHHHHHHHHHHhcCCceEEEEE
Confidence 3467999997 99999999999999976655544
|
| >d1nhpa1 c.3.1.5 (A:1-119,A:243-321) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH peroxidase species: Enterococcus faecalis [TaxId: 1351]
Probab=88.91 E-value=0.2 Score=39.21 Aligned_cols=33 Identities=21% Similarity=0.153 Sum_probs=28.3
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCC--CeEEEEEcCc
Q 021928 99 DAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDK 132 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~~~g--~~V~~~~R~~ 132 (305)
|||+|.|| |++|-+++..|.+.+ .+|+++.|++
T Consensus 1 ~KVvIIGg-G~~G~e~A~~l~~~~~~~~V~v~~~~~ 35 (198)
T d1nhpa1 1 MKVIVLGS-SHGGYEAVEELLNLHPDAEIQWYEKGD 35 (198)
T ss_dssp CEEEEECS-SHHHHHHHHHHHHHCTTSEEEEEESSS
T ss_pred CEEEEECC-cHHHHHHHHHHHhcCCCCeEEEEeCCC
Confidence 78999998 999999999998764 5788888764
|
| >d1cf2o1 c.2.1.3 (O:1-138,O:304-336) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus [TaxId: 2180]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Archaeon Methanothermus fervidus [TaxId: 2180]
Probab=88.79 E-value=1.2 Score=34.30 Aligned_cols=93 Identities=12% Similarity=0.073 Sum_probs=53.3
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCC-CeEEEEEcCcchh--hhhcCCCcEEeecC-----------CCCHHHHHHHhcCc
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNA--MESFGTYVESMAGD-----------ASNKKFLKTALRGV 163 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~R~~~~~--~~~~~~~v~~v~~D-----------~~d~~~~~~~~~~~ 163 (305)
|++|.|-| -|-||+.++|.|.+++ .+|+++....... ......+....... +.-...+..+++++
T Consensus 1 M~~VgING-fGRIGR~v~R~l~~~~di~vvaInd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~g~~~~~~~~v 79 (171)
T d1cf2o1 1 MKAVAING-YGTVGKRVADAIAQQDDMKVIGVSKTRPDFEARMALKKGYDLYVAIPERVKLFEKAGIEVAGTVDDMLDEA 79 (171)
T ss_dssp CEEEEEEC-CSHHHHHHHHHHHTSSSEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHTTCCCCEEHHHHHHTC
T ss_pred CeEEEEEc-CcHHHHHHHHHHHhCCCceEEEEecCCcHHHHHHHHhcCCceEecccccceeecccCcccCCChhHhhcCC
Confidence 57899998 5999999999998876 5777775432221 11111111111111 11011344567799
Q ss_pred cEEEECCcchHh----hhhhhcCCCEEEEEccc
Q 021928 164 RSIICPSEGFIS----NAGSLKGVQHVILLSQL 192 (305)
Q Consensus 164 d~Vi~~~~g~~~----~~a~~~gv~~~V~iSS~ 192 (305)
|+|+-|+|.+.. ..-.++|+ ++|++|+.
T Consensus 80 DvViEcTG~f~~~~~~~~hl~~G~-K~vi~~~~ 111 (171)
T d1cf2o1 80 DIVIDCTPEGIGAKNLKMYKEKGI-KAIFQGGE 111 (171)
T ss_dssp SEEEECCSTTHHHHHHHHHHHTTC-EEEECTTS
T ss_pred CEEEEccCCCCCHHHHHHHHHcCC-CEEEECCC
Confidence 999988775532 22234676 56666554
|
| >d1iuka_ c.2.1.8 (A:) Hypothetical protein TT1466 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Hypothetical protein TT1466 species: Thermus thermophilus [TaxId: 274]
Probab=88.63 E-value=1.3 Score=32.62 Aligned_cols=35 Identities=14% Similarity=0.058 Sum_probs=30.1
Q ss_pred CCCEEEEEcCC---ChHHHHHHHHHHhCCCeEEEEEcC
Q 021928 97 ARDAVLVTDGD---SDIGQMVILSLIVKRTRIKALVKD 131 (305)
Q Consensus 97 ~~~~vlVtGat---G~iG~~l~~~L~~~g~~V~~~~R~ 131 (305)
.+++|.|.||| +..|..+.+.|.+.||+++.+.-+
T Consensus 12 ~pksIAVVGaS~~~~k~g~~v~~~L~~~g~~~~~v~~~ 49 (136)
T d1iuka_ 12 QAKTIAVLGAHKDPSRPAHYVPRYLREQGYRVLPVNPR 49 (136)
T ss_dssp HCCEEEEETCCSSTTSHHHHHHHHHHHTTCEEEEECGG
T ss_pred CCCeEEEEeecCCCCCchHHHHHHHhcCCCCceEEEec
Confidence 35899999998 579999999999999999876543
|
| >d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Polyamine oxidase species: Maize (Zea mays) [TaxId: 4577]
Probab=88.37 E-value=0.21 Score=39.29 Aligned_cols=32 Identities=16% Similarity=0.061 Sum_probs=28.8
Q ss_pred EEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCc
Q 021928 100 AVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDK 132 (305)
Q Consensus 100 ~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~ 132 (305)
+|+|.|| |..|...+.+|.++|+ +|+++-+++
T Consensus 2 ~V~IIGa-G~aGL~aA~~L~~~G~~~V~vlE~~~ 34 (347)
T d1b5qa1 2 RVIVVGA-GMSGISAAKRLSEAGITDLLILEATD 34 (347)
T ss_dssp CEEEECC-BHHHHHHHHHHHHTTCCCEEEECSSS
T ss_pred CEEEECC-cHHHHHHHHHHHhCCCCcEEEEECCC
Confidence 6999998 9999999999999996 699998764
|
| >d2vapa1 c.32.1.1 (A:23-231) Cell-division protein FtsZ {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Tubulin nucleotide-binding domain-like superfamily: Tubulin nucleotide-binding domain-like family: Tubulin, GTPase domain domain: Cell-division protein FtsZ species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=87.71 E-value=0.51 Score=37.94 Aligned_cols=93 Identities=13% Similarity=0.212 Sum_probs=58.8
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCC---eEEEEEcCcchhhhhcCCCcEEeecCC-------------------CCH
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRT---RIKALVKDKRNAMESFGTYVESMAGDA-------------------SNK 153 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~---~V~~~~R~~~~~~~~~~~~v~~v~~D~-------------------~d~ 153 (305)
....+|.|.|- |+-|..++.+|.+.|. +.+++.-+...+. ......++..+.- .+.
T Consensus 13 ~~~~ki~ViGv-GGaG~n~v~~l~~~~~~~v~~iainTD~~~L~-~~~~~~ki~ig~~~t~g~Gag~~p~~g~~aa~e~~ 90 (209)
T d2vapa1 13 QTKAKITVVGC-GGAGNNTITRLKMEGIEGAKTVAINTDAQQLI-RTKADKKILIGKKLTRGLGAGGNPKIGEEAAKESA 90 (209)
T ss_dssp TTCCCEEEEEE-HHHHHHHHHHHHHHTCTTEEEEEEESBHHHHH-TSCCSEEEECCTTTTTTBCCTTCHHHHHHHHHHTH
T ss_pred ccCCcEEEEEe-CChHHHHHHHHHHcCCCceEEEEEeCCHHHHh-cCCcchhcccccccccccccccchHHHHHHHHHHH
Confidence 34579999997 8899999999998874 3344444433322 1222223333211 134
Q ss_pred HHHHHHhcCccEEEEC--C-cc-------hHhhhhhhcCCCEEEEEc
Q 021928 154 KFLKTALRGVRSIICP--S-EG-------FISNAGSLKGVQHVILLS 190 (305)
Q Consensus 154 ~~~~~~~~~~d~Vi~~--~-~g-------~~~~~a~~~gv~~~V~iS 190 (305)
+.+.+.++++|.||.+ . ++ .+++.+++.++..+-++.
T Consensus 91 ~~I~~~l~~~d~vfi~AGlGGGTGsgaapvia~~ake~g~lvv~ivt 137 (209)
T d2vapa1 91 EEIKAAIQDSDMVFITCGLGGGTGTGSAPVVAEISKKIGALTVAVVT 137 (209)
T ss_dssp HHHHHHHTTCSEEEEEEETTSSHHHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred HHHHHhccCCCEEEEEEeCCCCccccHHHHHHHHHHHcCCcEEEEEe
Confidence 6788899999999966 2 22 367788888875554444
|
| >d1xhca1 c.3.1.5 (A:1-103,A:226-289) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH oxidase /nitrite reductase species: Pyrococcus furiosus [TaxId: 2261]
Probab=87.61 E-value=0.29 Score=36.91 Aligned_cols=31 Identities=13% Similarity=0.165 Sum_probs=26.9
Q ss_pred EEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCc
Q 021928 100 AVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK 132 (305)
Q Consensus 100 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 132 (305)
||+|.|| |++|-+++..|. ++.+|.++.|.+
T Consensus 2 rVvIIGg-G~~G~e~A~~l~-~~~~Vtvv~~~~ 32 (167)
T d1xhca1 2 KVVIVGN-GPGGFELAKQLS-QTYEVTVIDKEP 32 (167)
T ss_dssp EEEEECC-SHHHHHHHHHHT-TTSEEEEECSSS
T ss_pred eEEEECC-cHHHHHHHHHHH-cCCCEEEEeccc
Confidence 7999998 999999999985 578999988764
|
| >d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains species: Escherichia coli [TaxId: 562]
Probab=87.52 E-value=0.93 Score=33.33 Aligned_cols=73 Identities=8% Similarity=0.023 Sum_probs=52.3
Q ss_pred CCEEEEEcC----------CChHHHHHHHHHHhCCCeEEEEEcCcchhhhhc--CCCcEEeecCCCCHHHHHHHhc--Cc
Q 021928 98 RDAVLVTDG----------DSDIGQMVILSLIVKRTRIKALVKDKRNAMESF--GTYVESMAGDASNKKFLKTALR--GV 163 (305)
Q Consensus 98 ~~~vlVtGa----------tG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~--~~~v~~v~~D~~d~~~~~~~~~--~~ 163 (305)
.++|||.|+ -.+.+.+.++.|.+.|++++.+.-+|+.....+ .+++-+-+. +.+.+.+.++ ..
T Consensus 7 ~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~g~~~iliN~NP~TVstd~d~aD~lYfePl---t~e~v~~Ii~~E~p 83 (127)
T d1a9xa3 7 IKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVINVNSNPATIMTDPEMADATYIEPI---HWEVVRKIIEKERP 83 (127)
T ss_dssp CCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTCEEEEECSCTTCGGGCGGGSSEEECSCC---CHHHHHHHHHHHCC
T ss_pred CCEEEEECCCcCcccccchhHHHHHHHHHHHHHcCCeEEEecCchHhhhcChhhcceeeeecC---CHHHHHHHHHHhCc
Confidence 489999998 346788999999999999999999987743322 232322222 4577777664 67
Q ss_pred cEEEECCcch
Q 021928 164 RSIICPSEGF 173 (305)
Q Consensus 164 d~Vi~~~~g~ 173 (305)
|.|+...+|.
T Consensus 84 d~il~~~GGQ 93 (127)
T d1a9xa3 84 DAVLPTMGGQ 93 (127)
T ss_dssp SEEECSSSHH
T ss_pred CCeEEEeeee
Confidence 9999876654
|
| >d1m6ia2 c.3.1.5 (A:264-400) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Apoptosis-inducing factor (AIF) species: Human (Homo sapiens) [TaxId: 9606]
Probab=86.92 E-value=0.41 Score=35.42 Aligned_cols=35 Identities=17% Similarity=0.224 Sum_probs=29.6
Q ss_pred CCEEEEEcCCChHHHHHHHHHH----hCCCeEEEEEcCcc
Q 021928 98 RDAVLVTDGDSDIGQMVILSLI----VKRTRIKALVKDKR 133 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~----~~g~~V~~~~R~~~ 133 (305)
.++++|.|| |++|-+++..|. +.|.+|..+.+++.
T Consensus 37 ~k~i~IvGg-G~~G~E~A~~l~~~~~~~g~~Vt~i~~~~~ 75 (137)
T d1m6ia2 37 VKSITIIGG-GFLGSELACALGRKARALGTEVIQLFPEKG 75 (137)
T ss_dssp CSEEEEECC-SHHHHHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred CCEEEEECC-CHHHHHHHHHHHHHHHhcCCEEEEeccccc
Confidence 589999998 999999998885 45889999888764
|
| >d1u0sy_ c.23.1.1 (Y:) CheY protein {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: CheY-like family: CheY-related domain: CheY protein species: Thermotoga maritima [TaxId: 2336]
Probab=86.55 E-value=2.1 Score=30.41 Aligned_cols=54 Identities=15% Similarity=0.160 Sum_probs=39.4
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcC-CCcEEeecCCC
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG-TYVESMAGDAS 151 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~-~~v~~v~~D~~ 151 (305)
+++|||.--+-.+-..+...|-+.|++|+....+...+.+... ....++..|+.
T Consensus 1 GkrILivDD~~~~~~~l~~~L~~~g~~v~~~a~~~~~al~~~~~~~~dliilD~~ 55 (118)
T d1u0sy_ 1 GKRVLIVDDAAFMRMMLKDIITKAGYEVAGEATNGREAVEKYKELKPDIVTMDIT 55 (118)
T ss_dssp CCEEEEECSCHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCCSEEEEECS
T ss_pred CCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCHHHHHHHHHhccCCEEEEecC
Confidence 4899999999999999999999999999877776655433222 23455666654
|
| >d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: 6-phospho-beta-glucosidase species: Thermotoga maritima [TaxId: 2336]
Probab=86.53 E-value=0.46 Score=36.39 Aligned_cols=66 Identities=8% Similarity=0.012 Sum_probs=40.5
Q ss_pred CEEEEEcCCChHHHHHHHHHH-h-C----CCeEEEEEcCcchhhhh-------cCCCcEEeecCCCCHHHHHHHhcCccE
Q 021928 99 DAVLVTDGDSDIGQMVILSLI-V-K----RTRIKALVKDKRNAMES-------FGTYVESMAGDASNKKFLKTALRGVRS 165 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~-~-~----g~~V~~~~R~~~~~~~~-------~~~~v~~v~~D~~d~~~~~~~~~~~d~ 165 (305)
|+|.|.|| |.+|...+-..+ . . ..++++++.++++.... ......+... ++ ..++++++|+
T Consensus 1 mKIaiIGa-Gs~g~~~~~~~l~~~~~~~~~~el~L~Did~~k~~~~~d~~~~~~~~~~~~~~t--~~---~~~~l~~aDv 74 (162)
T d1up7a1 1 MRIAVIGG-GSSYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVDFVKRLVKDRFKVLIS--DT---FEGAVVDAKY 74 (162)
T ss_dssp CEEEEETT-TCTTHHHHHHHHHHHTTTSCCCEEEEECSCHHHHHHHHHHHHHHHTTSSEEEEC--SS---HHHHHTTCSE
T ss_pred CEEEEECC-CHHHHHHHHHHHHhcccccCccEEEEEecCcHHHHHHHHHHHhhhccCceEEEe--cC---cccccCCCCE
Confidence 68999998 657766654322 1 1 35899999988763211 1222333221 12 3578899999
Q ss_pred EEECC
Q 021928 166 IICPS 170 (305)
Q Consensus 166 Vi~~~ 170 (305)
||.++
T Consensus 75 VVita 79 (162)
T d1up7a1 75 VIFQF 79 (162)
T ss_dssp EEECC
T ss_pred EEEec
Confidence 99873
|
| >d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Monoamine oxidase B species: Human (Homo sapiens) [TaxId: 9606]
Probab=86.53 E-value=0.33 Score=40.43 Aligned_cols=31 Identities=19% Similarity=0.115 Sum_probs=28.6
Q ss_pred EEEEcCCChHHHHHHHHHHhCCCeEEEEEcCc
Q 021928 101 VLVTDGDSDIGQMVILSLIVKRTRIKALVKDK 132 (305)
Q Consensus 101 vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 132 (305)
|+|.|| |..|...+.+|.++|++|+++.++.
T Consensus 2 ViVIGa-G~aGL~aA~~L~~~G~~V~VlE~~~ 32 (383)
T d2v5za1 2 VVVVGG-GISGMAAAKLLHDSGLNVVVLEARD 32 (383)
T ss_dssp EEEECC-BHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred EEEECC-CHHHHHHHHHHHhCCCCEEEEecCC
Confidence 789997 9999999999999999999998754
|
| >d1w5fa1 c.32.1.1 (A:22-215) Cell-division protein FtsZ {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Tubulin nucleotide-binding domain-like superfamily: Tubulin nucleotide-binding domain-like family: Tubulin, GTPase domain domain: Cell-division protein FtsZ species: Thermotoga maritima [TaxId: 2336]
Probab=86.23 E-value=1.2 Score=35.07 Aligned_cols=90 Identities=14% Similarity=0.168 Sum_probs=57.3
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCC---eEEEEEcCcchhhhhcCCCcEEeecCC-------------------CCHHHH
Q 021928 99 DAVLVTDGDSDIGQMVILSLIVKRT---RIKALVKDKRNAMESFGTYVESMAGDA-------------------SNKKFL 156 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~~~g~---~V~~~~R~~~~~~~~~~~~v~~v~~D~-------------------~d~~~~ 156 (305)
++|.|.|- |+-|..++.+|.+.|. +.+++.-+..... ..+...++..+.- .+.+.+
T Consensus 1 ~kI~viGv-GGaG~n~v~~l~~~~~~~v~~iainTD~~~L~-~~~a~~ki~iG~~~t~G~G~g~~p~~g~~aa~e~~~~I 78 (194)
T d1w5fa1 1 LKIKVIGV-GGAGNNAINRMIEIGIHGVEFVAVNTDLQVLE-ASNADVKIQIGENITRGLGAGGRPEIGEQAALESEEKI 78 (194)
T ss_dssp CCEEEEEE-HHHHHHHHHHHHHHCCTTEEEEEEESCHHHHH-TCCCSEEEECCTTTTTTSCCTTCHHHHHHHHHHTHHHH
T ss_pred CeEEEEEe-CchHHHHHHHHHHcCCCceEEEEEcCCHHHHh-cCCcceEEecccccCCCcccccCchhhHhHHHHHHHHH
Confidence 47888997 8899999999998774 4455554443322 2222233333311 135778
Q ss_pred HHHhcCccEEEEC--Cc-c-------hHhhhhhhcCCCEEEEEc
Q 021928 157 KTALRGVRSIICP--SE-G-------FISNAGSLKGVQHVILLS 190 (305)
Q Consensus 157 ~~~~~~~d~Vi~~--~~-g-------~~~~~a~~~gv~~~V~iS 190 (305)
.+.++++|.||.+ .+ + .+++.+++.++.-+-+++
T Consensus 79 ~~~l~~~d~vfi~AGlGGgTGtgaapviA~~ake~g~lvv~ivt 122 (194)
T d1w5fa1 79 REVLQDTHMVFITAGFGGGTGTGASPVIAKIAKEMGILTVAIVT 122 (194)
T ss_dssp HHHTTTCSEEEEEEETTSSHHHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred HHHhcCCCeEEEEEecCCCcccchHHHHHHHHHHcCCceEEEEe
Confidence 8899999999976 22 2 377888888875444443
|
| >d2nu7a1 c.2.1.8 (A:2-120) Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain species: Escherichia coli [TaxId: 562]
Probab=85.83 E-value=3 Score=30.00 Aligned_cols=87 Identities=11% Similarity=0.155 Sum_probs=54.0
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEE-ECCcchHh
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSII-CPSEGFIS 175 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi-~~~~g~~~ 175 (305)
+..+|+|-|-||..|+.-+++.++.|.+|++-+.....-....+ +-+ .|.- .+++++ .++|+-+ +.-+.+..
T Consensus 5 k~trVlvQGiTG~~G~~ht~~m~~yGT~vVaGVtPgkgG~~~~g--iPV--f~sV-~eAv~~--~~~~~SvIfVPp~~a~ 77 (119)
T d2nu7a1 5 KNTKVICQGFTGSQGTFHSEQAIAYGTKMVGGVTPGKGGTTHLG--LPV--FNTV-REAVAA--TGATASVIYVPAPFCK 77 (119)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCTTEEETT--EEE--ESSH-HHHHHH--HCCCEEEECCCGGGHH
T ss_pred CCCcEEEEcCCCcHHHHHHHHHHHhCCceEEEEccCCCCcccCC--Cch--hhHH-HHHHHH--hCCCeEEEeccHHHHH
Confidence 35799999999999999999999999999987765322111111 111 1111 233333 2565544 44444444
Q ss_pred hhh---hhcCCCEEEEEc
Q 021928 176 NAG---SLKGVQHVILLS 190 (305)
Q Consensus 176 ~~a---~~~gv~~~V~iS 190 (305)
+++ .++|++.+|.++
T Consensus 78 dA~~EAi~agI~~iV~IT 95 (119)
T d2nu7a1 78 DSILEAIDAGIKLIITIT 95 (119)
T ss_dssp HHHHHHHHTTCSEEEECC
T ss_pred HHHHHHHHCCCCEEEEec
Confidence 443 357999888776
|
| >d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: HI0933 N-terminal domain-like domain: Flavoprotein BC4706 species: Bacillus cereus [TaxId: 1396]
Probab=85.71 E-value=0.39 Score=38.57 Aligned_cols=32 Identities=22% Similarity=0.286 Sum_probs=29.6
Q ss_pred EEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCc
Q 021928 100 AVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK 132 (305)
Q Consensus 100 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 132 (305)
-|+|.|| |-.|...+.+|+++|++|+++.+++
T Consensus 4 DViIIGa-G~aGl~aA~~la~~G~~V~liEk~~ 35 (251)
T d2i0za1 4 DVIVIGG-GPSGLMAAIGAAEEGANVLLLDKGN 35 (251)
T ss_dssp SEEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CEEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 4899998 9999999999999999999998875
|
| >d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Acetaldehyde dehydrogenase (acylating) species: Pseudomonas sp. [TaxId: 306]
Probab=85.27 E-value=0.23 Score=38.11 Aligned_cols=68 Identities=12% Similarity=0.209 Sum_probs=39.8
Q ss_pred CCEEEEEcCCChHHHHHHHHHH-hCC-CeEEEE-EcCcchh----hhhcCCCcEEeecCCCCHHHHHHH--hcCccEEEE
Q 021928 98 RDAVLVTDGDSDIGQMVILSLI-VKR-TRIKAL-VKDKRNA----MESFGTYVESMAGDASNKKFLKTA--LRGVRSIIC 168 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~-~~g-~~V~~~-~R~~~~~----~~~~~~~v~~v~~D~~d~~~~~~~--~~~~d~Vi~ 168 (305)
+.+|.|.| +|.+|+.+..+++ ... .+++++ +|+++.. .+.++ +.+.. ...+.+.+. +.++|+||.
T Consensus 4 kirvaIIG-aG~ig~~~~~~~l~~~~~~el~avas~~~~~~~~~~a~~~~--i~~~~---~~~d~l~~~~~~~~iDiVf~ 77 (157)
T d1nvmb1 4 KLKVAIIG-SGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRMG--VTTTY---AGVEGLIKLPEFADIDFVFD 77 (157)
T ss_dssp CEEEEEEC-CSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHTT--CCEES---SHHHHHHHSGGGGGEEEEEE
T ss_pred CcEEEEEc-CcHHHHHHHHHHHhhCCcceEEEEEecchhccchhhhhhcC--Ccccc---cceeeeeecccccccCEEEE
Confidence 47999999 8999997554444 333 477776 4554421 12222 33222 223444443 457999998
Q ss_pred CCc
Q 021928 169 PSE 171 (305)
Q Consensus 169 ~~~ 171 (305)
+++
T Consensus 78 ATp 80 (157)
T d1nvmb1 78 ATS 80 (157)
T ss_dssp CSC
T ss_pred cCC
Confidence 854
|
| >d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Phenylacetone monooxygenase species: Thermobifida fusca [TaxId: 2021]
Probab=84.67 E-value=0.48 Score=40.00 Aligned_cols=34 Identities=15% Similarity=0.091 Sum_probs=31.1
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcc
Q 021928 99 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR 133 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~ 133 (305)
-.|+|.|| |..|...+++|.++|.+|+++.++++
T Consensus 8 ~dV~IIGA-G~sGl~~a~~L~~~G~~v~i~Ek~~~ 41 (298)
T d1w4xa1 8 VDVLVVGA-GFSGLYALYRLRELGRSVHVIETAGD 41 (298)
T ss_dssp EEEEEECC-SHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CCEEEECc-cHHHHHHHHHHHhCCCCEEEEEcCCC
Confidence 57999998 99999999999999999999988754
|
| >d1oi7a1 c.2.1.8 (A:1-121) Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain species: Thermus thermophilus [TaxId: 274]
Probab=84.54 E-value=3.7 Score=29.59 Aligned_cols=86 Identities=22% Similarity=0.225 Sum_probs=54.5
Q ss_pred CCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEEC-CcchHhh
Q 021928 98 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP-SEGFISN 176 (305)
Q Consensus 98 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~-~~g~~~~ 176 (305)
..+|+|-|-||..|+.-+++.++.|.+|++-+.....-.+.. ++-+ .|.- .+++++ .++|+-+.. -+.+..+
T Consensus 7 ~trVivQGiTG~~G~~ht~~m~~yGT~iVaGVtPgkgG~~~~--giPV--f~tV-~eAv~~--~~~d~SvIfVPp~~a~d 79 (121)
T d1oi7a1 7 ETRVLVQGITGREGQFHTKQMLTYGTKIVAGVTPGKGGMEVL--GVPV--YDTV-KEAVAH--HEVDASIIFVPAPAAAD 79 (121)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCTTCEET--TEEE--ESSH-HHHHHH--SCCSEEEECCCHHHHHH
T ss_pred CCcEEEEcCCCcHHHHHHHHHHHhCCceEeeeecCCCCcEEE--CCch--HhhH-HHHHHh--cCCeEEEEeeCHHHHHH
Confidence 468999999999999999999999999999876542211111 1111 1110 233333 367766644 4444444
Q ss_pred hh---hhcCCCEEEEEc
Q 021928 177 AG---SLKGVQHVILLS 190 (305)
Q Consensus 177 ~a---~~~gv~~~V~iS 190 (305)
++ .+++++.+|.++
T Consensus 80 Ai~EAi~agI~liv~IT 96 (121)
T d1oi7a1 80 AALEAAHAGIPLIVLIT 96 (121)
T ss_dssp HHHHHHHTTCSEEEECC
T ss_pred HHHHHHhCCCcEEEEec
Confidence 43 457999888776
|
| >d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Pyrobaculum islandicum [TaxId: 2277]
Probab=84.40 E-value=0.7 Score=37.89 Aligned_cols=35 Identities=11% Similarity=0.125 Sum_probs=31.2
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCc
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK 132 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 132 (305)
.+++|+|-|- |.+|+++++.|.+.|.+|++++...
T Consensus 30 ~g~~v~IqGf-GnVG~~~a~~L~~~Gakvv~vsD~~ 64 (242)
T d1v9la1 30 EGKTVAIQGM-GNVGRWTAYWLEKMGAKVIAVSDIN 64 (242)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHTTTCEEEEEECSS
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEeeccc
Confidence 4599999995 9999999999999999999988653
|
| >d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain 3 {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: C-terminal domain of adrenodoxin reductase-like domain: Dihydropyrimidine dehydrogenase, domain 3 species: Pig (Sus scrofa) [TaxId: 9823]
Probab=84.21 E-value=1 Score=33.96 Aligned_cols=35 Identities=20% Similarity=0.178 Sum_probs=29.5
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCe-EEEEEcCc
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTR-IKALVKDK 132 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~-V~~~~R~~ 132 (305)
-+++|+|.|| |.+|...+..+++.|.+ |+.+.|..
T Consensus 44 ~~~kVvVIGG-GdtA~D~A~~a~r~GA~~V~vi~rr~ 79 (153)
T d1gtea3 44 IRGAVIVLGA-GDTAFDCATSALRCGARRVFLVFRKG 79 (153)
T ss_dssp CCSEEEEECS-SHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred CCCEEEEECC-ChhHHHHHHHHHHcCCcceeEEEeCC
Confidence 3578999998 99999999999999974 77777764
|
| >d1tlta1 c.2.1.3 (A:5-127,A:268-308) Virulence factor MviM {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Virulence factor MviM species: Escherichia coli [TaxId: 562]
Probab=83.87 E-value=0.75 Score=34.79 Aligned_cols=80 Identities=13% Similarity=0.056 Sum_probs=45.6
Q ss_pred CEEEEEcCCChHHHH-HHHHHHhC-CCeEEEEE-cCcchhhhhcCC-CcEEeecCCCCHHHHHHHhcCccEEEECCcc-h
Q 021928 99 DAVLVTDGDSDIGQM-VILSLIVK-RTRIKALV-KDKRNAMESFGT-YVESMAGDASNKKFLKTALRGVRSIICPSEG-F 173 (305)
Q Consensus 99 ~~vlVtGatG~iG~~-l~~~L~~~-g~~V~~~~-R~~~~~~~~~~~-~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~g-~ 173 (305)
++|.|.|. |.+|+. ....|... +.++++++ +++++....... ++. +.+ .+..+++++|+|+.+++. .
T Consensus 2 iri~iIG~-G~~g~~~~~~~l~~~~~~~i~~v~d~~~~~~~~~~~~~~~~-----~~~--~~~~l~~~~D~V~I~tp~~~ 73 (164)
T d1tlta1 2 LRIGVVGL-GGIAQKAWLPVLAAASDWTLQGAWSPTRAKALPICESWRIP-----YAD--SLSSLAASCDAVFVHSSTAS 73 (164)
T ss_dssp EEEEEECC-STHHHHTHHHHHHSCSSEEEEEEECSSCTTHHHHHHHHTCC-----BCS--SHHHHHTTCSEEEECSCTTH
T ss_pred CEEEEEcC-CHHHHHHHHHHHHhCCCcEEEEEEechhHhhhhhhhccccc-----ccc--cchhhhhhcccccccccchh
Confidence 68999995 889975 45555543 57888765 555443321110 121 222 234445789999988542 2
Q ss_pred ---HhhhhhhcCCCEEE
Q 021928 174 ---ISNAGSLKGVQHVI 187 (305)
Q Consensus 174 ---~~~~a~~~gv~~~V 187 (305)
+...+-+.| ++++
T Consensus 74 h~~~~~~al~~g-k~V~ 89 (164)
T d1tlta1 74 HFDVVSTLLNAG-VHVC 89 (164)
T ss_dssp HHHHHHHHHHTT-CEEE
T ss_pred cccccccccccc-ceee
Confidence 344445566 4553
|
| >d1n4wa1 c.3.1.2 (A:9-318,A:451-507) Cholesterol oxidase of GMC family {Streptomyces sp. [TaxId: 1931]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Cholesterol oxidase of GMC family species: Streptomyces sp. [TaxId: 1931]
Probab=83.49 E-value=0.54 Score=40.15 Aligned_cols=30 Identities=13% Similarity=-0.044 Sum_probs=27.8
Q ss_pred EEEEcCCChHHHHHHHHHHhCCCeEEEEEcC
Q 021928 101 VLVTDGDSDIGQMVILSLIVKRTRIKALVKD 131 (305)
Q Consensus 101 vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~ 131 (305)
|+|.|+ |+-|..++.+|+++|++|.++-+-
T Consensus 5 VIVVGs-G~aG~v~A~rLaeaG~~VlvLEaG 34 (367)
T d1n4wa1 5 AVVIGT-GYGAAVSALRLGEAGVQTLMLEMG 34 (367)
T ss_dssp EEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred EEEeCc-CHHHHHHHHHHHHCcCeEEEEecC
Confidence 789996 999999999999999999999874
|
| >d1mo9a1 c.3.1.5 (A:2-192,A:314-383) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase species: Xanthobacter sp., py2 [TaxId: 35809]
Probab=83.11 E-value=1 Score=36.60 Aligned_cols=57 Identities=16% Similarity=0.168 Sum_probs=43.3
Q ss_pred hHHHHHHHhcCcccccccCCCCCCCCCCCCCCCccccccCcCCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCc
Q 021928 55 VDQILDYIEGGPKLRKWYGAPDLLPKDGSNEEDEEKEDEFPEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK 132 (305)
Q Consensus 55 ~~~~~~~~~~gp~lr~w~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 132 (305)
.|+||...++|..... .+.. +...--++|.|| |..|...+..+.+.|.+|.++.+.+
T Consensus 19 ~~~~~~~~~~~~~~~~-~~~~-------------------~~k~yDvvVIGg-G~aG~~aA~~~a~~G~kv~vve~~~ 75 (261)
T d1mo9a1 19 IDEILEAPDGGEVIYN-VDEN-------------------DPREYDAIFIGG-GAAGRFGSAYLRAMGGRQLIVDRWP 75 (261)
T ss_dssp HHHHHHCTTCCCEEEE-CCTT-------------------CCSCBSEEEECC-SHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred hhhhhhcCCCCceEec-CCCC-------------------CCccCCEEEECC-CHHHHHHHHHHHHCCCeEEEEeccC
Confidence 6888888888886665 2111 111245888887 9999999999999999999998765
|
| >d2blna2 c.65.1.1 (A:1-203) Polymyxin resistance protein ArnA, N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Formyltransferase superfamily: Formyltransferase family: Formyltransferase domain: Polymyxin resistance protein ArnA, N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=83.01 E-value=1.2 Score=35.28 Aligned_cols=70 Identities=13% Similarity=0.121 Sum_probs=42.4
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhh-h-------hc--CCCcEEe-ecCCCCHHHHHHHh-cCccEE
Q 021928 99 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM-E-------SF--GTYVESM-AGDASNKKFLKTAL-RGVRSI 166 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~-~-------~~--~~~v~~v-~~D~~d~~~~~~~~-~~~d~V 166 (305)
|+|+|+|. +..|..+++.|++.|++|.++.-.+++.. . .+ ..++.++ ..++.+.+.++..- ..+|.+
T Consensus 1 Mkiv~~~~-~~~g~~~l~~L~~~g~~I~~Vvt~~~~~~~~~~~~~~~~~a~~~~i~~~~~~~~~~~~~~~~i~~~~~Dli 79 (203)
T d2blna2 1 MKTVVFAY-HDMGCLGIEALLAAGYEISAIFTHTDNPGEKAFYGSVARLAAERGIPVYAPDNVNHPLWVERIAQLSPDVI 79 (203)
T ss_dssp CEEEEEEC-HHHHHHHHHHHHHTTCEEEEEECCCC------CCCCHHHHHHHHTCCEECCSCCCSHHHHHHHHHTCCSEE
T ss_pred CeEEEEec-CHHHHHHHHHHHHCCCCEEEEEcCCCCCCcccccCHHHHHHHHcCCcceecccccchhhhhhhhhhcccce
Confidence 68899975 66899999999999999987763332210 0 00 0123433 34666654443322 257888
Q ss_pred EEC
Q 021928 167 ICP 169 (305)
Q Consensus 167 i~~ 169 (305)
|++
T Consensus 80 i~~ 82 (203)
T d2blna2 80 FSF 82 (203)
T ss_dssp EEE
T ss_pred eee
Confidence 876
|
| >d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavin-dependent monoxygenase SPBP16F5.08c species: Schizosaccharomyces pombe [TaxId: 4896]
Probab=82.33 E-value=0.6 Score=32.90 Aligned_cols=36 Identities=14% Similarity=0.032 Sum_probs=30.2
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcc
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR 133 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~ 133 (305)
.+|+|+|.|+ |.-|..++..|+...-+++.+.|...
T Consensus 31 ~gK~VlVVG~-g~Sa~dia~~l~~~ak~v~~~~~r~~ 66 (107)
T d2gv8a2 31 VGESVLVVGG-ASSANDLVRHLTPVAKHPIYQSLLGG 66 (107)
T ss_dssp TTCCEEEECS-SHHHHHHHHHHTTTSCSSEEEECTTC
T ss_pred CCCeEEEECC-CCCHHHHHHHHHHhcCEEEEEEecCc
Confidence 5699999997 89999999999988877777766654
|
| >d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: 6-phospho-beta-glucosidase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=82.16 E-value=2.2 Score=32.54 Aligned_cols=70 Identities=11% Similarity=-0.031 Sum_probs=39.0
Q ss_pred CCEEEEEcC-CChHHHHHHHHHHhCC----CeEEEEEcCcchh--h--hh-----c-CCCcEEeecCCCCHHHHHHHhcC
Q 021928 98 RDAVLVTDG-DSDIGQMVILSLIVKR----TRIKALVKDKRNA--M--ES-----F-GTYVESMAGDASNKKFLKTALRG 162 (305)
Q Consensus 98 ~~~vlVtGa-tG~iG~~l~~~L~~~g----~~V~~~~R~~~~~--~--~~-----~-~~~v~~v~~D~~d~~~~~~~~~~ 162 (305)
+++|.|.|| +.+.+..++..+.... -++++++.+++.. . .. + ..+..+-....+| ..+++++
T Consensus 1 k~KI~iIGaGs~~~~~~~~~l~~~~~~~~~~eI~L~Di~e~~~~~~~~d~~~~~~~~~~~~~~~~~~~td---~~~al~g 77 (169)
T d1s6ya1 1 RLKIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGALAKRMVEKAGVPIEIHLTLD---RRRALDG 77 (169)
T ss_dssp CEEEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCCEEEEESC---HHHHHTT
T ss_pred CcEEEEECCChhhHHHHHHHHHHhccccCCCEEEEEcCCccHHHHHHHHHHHHHHHHhcCCCceeeecCC---chhhcCC
Confidence 478999997 3344455555444322 3788888776541 1 10 1 0112222222334 3567899
Q ss_pred ccEEEECC
Q 021928 163 VRSIICPS 170 (305)
Q Consensus 163 ~d~Vi~~~ 170 (305)
+|+||.++
T Consensus 78 aDvVv~ta 85 (169)
T d1s6ya1 78 ADFVTTQF 85 (169)
T ss_dssp CSEEEECC
T ss_pred CCEEEEcc
Confidence 99999883
|
| >d1euca1 c.2.1.8 (A:1-130) Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=82.10 E-value=3.2 Score=30.35 Aligned_cols=88 Identities=11% Similarity=0.078 Sum_probs=53.9
Q ss_pred CCCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcCCCcEEeecCCCCHHHHHHHhcCccEEEEC-CcchH
Q 021928 96 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP-SEGFI 174 (305)
Q Consensus 96 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~-~~g~~ 174 (305)
.+..+|+|-|-||..|+.-+++.++.|.+|++-+.....-....+ +-+ .|-- .+++++ .++|+-+.. -+.+.
T Consensus 13 ~k~TrVivQGiTG~~G~~ht~~m~~YGT~iVaGVtPgKgG~~~~g--iPV--f~tV-~eA~~~--~~~daSvIfVPp~~a 85 (130)
T d1euca1 13 DKNTKVICQGFTGKQGTFHSQQALEYGTNLVGGTTPGKGGKTHLG--LPV--FNTV-KEAKEQ--TGATASVIYVPPPFA 85 (130)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCTTCEETT--EEE--ESSH-HHHHHH--HCCCEEEECCCHHHH
T ss_pred cCCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEeeccCCCCccccC--ccc--hhhH-HHHHHh--cCCcEEEEecCHHHH
Confidence 345899999999999999999999999999988765422111111 111 1111 122222 256655543 44444
Q ss_pred hhhh---hhcCCCEEEEEc
Q 021928 175 SNAG---SLKGVQHVILLS 190 (305)
Q Consensus 175 ~~~a---~~~gv~~~V~iS 190 (305)
.+++ .++|++.+|.++
T Consensus 86 ~dAi~EAi~agI~liV~IT 104 (130)
T d1euca1 86 AAAINEAIDAEVPLVVCIT 104 (130)
T ss_dssp HHHHHHHHHTTCSEEEECC
T ss_pred HHHHHHHHhCCCCEEEEec
Confidence 4443 347888887765
|
| >d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain domain: Flavocytochrome c3 (respiratory fumarate reductase) species: Shewanella frigidimarina [TaxId: 56812]
Probab=82.07 E-value=0.65 Score=38.58 Aligned_cols=32 Identities=16% Similarity=0.201 Sum_probs=29.6
Q ss_pred EEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCc
Q 021928 100 AVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK 132 (305)
Q Consensus 100 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 132 (305)
-|+|.|| |..|...+.+|+++|.+|+++.+.+
T Consensus 18 DVlVIG~-G~aGl~aA~~la~~G~~V~lvEK~~ 49 (308)
T d1y0pa2 18 DVVVVGS-GGAGFSAAISATDSGAKVILIEKEP 49 (308)
T ss_dssp SEEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CEEEECc-CHHHHHHHHHHHHCCCcEEEEecCC
Confidence 5899997 9999999999999999999998765
|
| >d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Probable oxidoreductase At4g09670 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=81.95 E-value=1.3 Score=33.96 Aligned_cols=67 Identities=12% Similarity=0.088 Sum_probs=41.5
Q ss_pred CEEEEEcCCChHHHHHHHHHHhC-CCeEEEE-EcCcchhhh---hcC--CCcEEeecCCCCHHHHHHHhcCccEEEECCc
Q 021928 99 DAVLVTDGDSDIGQMVILSLIVK-RTRIKAL-VKDKRNAME---SFG--TYVESMAGDASNKKFLKTALRGVRSIICPSE 171 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~~~-g~~V~~~-~R~~~~~~~---~~~--~~v~~v~~D~~d~~~~~~~~~~~d~Vi~~~~ 171 (305)
.+|.|.|+ |.+|+..++.|... +.+|+++ +++++++.. .+. ...++ ..|.+.+.+ -.++|+|+.+++
T Consensus 2 iki~iIG~-G~~g~~~~~~l~~~~~~~i~ai~d~~~~~~~~~~~~~~~~~~~~~----~~~~~~ll~-~~~iD~v~I~tp 75 (184)
T d1ydwa1 2 IRIGVMGC-ADIARKVSRAIHLAPNATISGVASRSLEKAKAFATANNYPESTKI----HGSYESLLE-DPEIDALYVPLP 75 (184)
T ss_dssp EEEEEESC-CTTHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCCTTCEE----ESSHHHHHH-CTTCCEEEECCC
T ss_pred eEEEEEcC-CHHHHHHHHHHHhCCCCEEEEEEeCCccccccchhccccccceee----cCcHHHhhh-ccccceeeeccc
Confidence 58999996 88999999988775 5688876 455544322 121 12222 234343322 246899998855
|
| >d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Leucine dehydrogenase species: Bacillus sphaericus [TaxId: 1421]
Probab=81.59 E-value=0.92 Score=36.87 Aligned_cols=79 Identities=6% Similarity=-0.042 Sum_probs=50.1
Q ss_pred CCCEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhcC-CCcEEeecCCCCHHHHHHHh-cCccEEEEC-Ccch
Q 021928 97 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG-TYVESMAGDASNKKFLKTAL-RGVRSIICP-SEGF 173 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~-~~v~~v~~D~~d~~~~~~~~-~~~d~Vi~~-~~g~ 173 (305)
.+++|+|-|- |.+|+++++.|.+.|.+|++.+.+......... .+.+++ +.+ +.+ ..||+++-| .++.
T Consensus 38 ~g~~v~IqG~-GnVG~~~a~~L~~~Gakvv~~d~~~~~~~~~~~~~g~~~~-----~~~---~~~~~~cDIl~PcA~~~~ 108 (230)
T d1leha1 38 EGLAVSVQGL-GNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEEGADAV-----APN---AIYGVTCDIFAPCALGAV 108 (230)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCCEEC-----CGG---GTTTCCCSEEEECSCSCC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEeecccHHHHHHHHHhcCCccc-----CCc---ccccccccEecccccccc
Confidence 4599999996 999999999999999999998877655332211 112222 112 222 368999955 4443
Q ss_pred H-hhhhhhcCCC
Q 021928 174 I-SNAGSLKGVQ 184 (305)
Q Consensus 174 ~-~~~a~~~gv~ 184 (305)
+ .+.+.+-+++
T Consensus 109 I~~~~~~~l~ak 120 (230)
T d1leha1 109 LNDFTIPQLKAK 120 (230)
T ss_dssp BSTTHHHHCCCS
T ss_pred cChHHhhccCcc
Confidence 2 2334444554
|
| >d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Maltose-6'-phosphate glucosidase GlvA species: Bacillus subtilis [TaxId: 1423]
Probab=80.50 E-value=2.3 Score=32.47 Aligned_cols=68 Identities=15% Similarity=0.136 Sum_probs=41.3
Q ss_pred CCCEEEEEcCCChHHHH-HHHHHHhC-----CCeEEEEEcCcchhhh----------hcCCCcEEeecCCCCHHHHHHHh
Q 021928 97 ARDAVLVTDGDSDIGQM-VILSLIVK-----RTRIKALVKDKRNAME----------SFGTYVESMAGDASNKKFLKTAL 160 (305)
Q Consensus 97 ~~~~vlVtGatG~iG~~-l~~~L~~~-----g~~V~~~~R~~~~~~~----------~~~~~v~~v~~D~~d~~~~~~~~ 160 (305)
+..+|.|.|| |.+|.. ++..|+.. +-+|++++.+++++.. ......++... .+.++++
T Consensus 2 k~~KI~iIGa-Gsv~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~eal 75 (167)
T d1u8xx1 2 KSFSIVIAGG-GSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAAT-----TDPEEAF 75 (167)
T ss_dssp CCEEEEEECT-TSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEE-----SCHHHHH
T ss_pred CCceEEEECC-ChhhhHHHHHHHHhhhhhcCCCEEEEEcCChhHHHHHHHHHHHHHHHhCCCcceEec-----CChhhcc
Confidence 3468999998 555554 44444432 2379999988876331 11222333322 2356789
Q ss_pred cCccEEEECC
Q 021928 161 RGVRSIICPS 170 (305)
Q Consensus 161 ~~~d~Vi~~~ 170 (305)
+++|.||.++
T Consensus 76 ~~AD~Vvita 85 (167)
T d1u8xx1 76 TDVDFVMAHI 85 (167)
T ss_dssp SSCSEEEECC
T ss_pred CCCCEEEECC
Confidence 9999999884
|
| >d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: MraW-like putative methyltransferases domain: TM0872, methyltransferase domain species: Thermotoga maritima [TaxId: 2336]
Probab=80.43 E-value=2.1 Score=33.49 Aligned_cols=65 Identities=18% Similarity=0.225 Sum_probs=45.4
Q ss_pred EEcCCChHHHHHHHHHHhCCCeEEEEEcCcchh------hhhcCCCcEEeecCCCCHHHHHHHh--cCccEEEEC
Q 021928 103 VTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA------MESFGTYVESMAGDASNKKFLKTAL--RGVRSIICP 169 (305)
Q Consensus 103 VtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~------~~~~~~~v~~v~~D~~d~~~~~~~~--~~~d~Vi~~ 169 (305)
+|-|+|+...++.+.+ . +.+|++++++++.. ...+..++.++.+++.+...+..-+ ..+|.|+.-
T Consensus 30 ~t~G~Gghs~~il~~~-~-~~~vi~~D~d~~~l~~a~~~l~~~~~r~~~~~~~f~~~~~~~~~~~~~~vdgIl~D 102 (192)
T d1m6ya2 30 CTVGEGGHSRAILEHC-P-GCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSYREADFLLKTLGIEKVDGILMD 102 (192)
T ss_dssp TTCTTSHHHHHHHHHC-T-TCEEEEEESCHHHHHHHHHHTGGGTTTEEEEECCGGGHHHHHHHTTCSCEEEEEEE
T ss_pred ecCCCcHHHHHHHhcC-C-CCeEEEeechHHHHHHHHHhhccccccccchhHHHhhHHHHHHHcCCCCcceeeec
Confidence 4555666666776665 2 46899999998662 2235668999999998877665553 567888753
|
| >d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: HI0933 N-terminal domain-like domain: Hypothetical protein HI0933 species: Haemophilus influenzae [TaxId: 727]
Probab=80.43 E-value=0.84 Score=36.89 Aligned_cols=34 Identities=9% Similarity=0.157 Sum_probs=30.8
Q ss_pred CEEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcc
Q 021928 99 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR 133 (305)
Q Consensus 99 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~ 133 (305)
..|+|.|| |-.|...+.+|+++|++|.++.+++.
T Consensus 5 ~DViIIGa-G~aGl~aA~~la~~G~~V~vlEk~~~ 38 (253)
T d2gqfa1 5 SENIIIGA-GAAGLFCAAQLAKLGKSVTVFDNGKK 38 (253)
T ss_dssp CSEEEECC-SHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CcEEEECc-CHHHHHHHHHHHHCCCcEEEEecCCC
Confidence 45999998 99999999999999999999998763
|
| >d1rq2a1 c.32.1.1 (A:8-205) Cell-division protein FtsZ {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Tubulin nucleotide-binding domain-like superfamily: Tubulin nucleotide-binding domain-like family: Tubulin, GTPase domain domain: Cell-division protein FtsZ species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=80.03 E-value=4 Score=32.02 Aligned_cols=89 Identities=16% Similarity=0.182 Sum_probs=55.6
Q ss_pred EEEEEcCCChHHHHHHHHHHhCCC---eEEEEEcCcchhhhhcCCCcEEeecC-------------------CCCHHHHH
Q 021928 100 AVLVTDGDSDIGQMVILSLIVKRT---RIKALVKDKRNAMESFGTYVESMAGD-------------------ASNKKFLK 157 (305)
Q Consensus 100 ~vlVtGatG~iG~~l~~~L~~~g~---~V~~~~R~~~~~~~~~~~~v~~v~~D-------------------~~d~~~~~ 157 (305)
+|-|.|- |+.|..++.+|.+.+. +.+++.-+..... ......++..+. ..+.+.+.
T Consensus 3 ~IkViGv-GGaG~n~vn~~~~~~~~~v~~iainTD~~~L~-~~~~~~ki~iG~~~t~G~Gagg~p~~g~~aa~e~~~~I~ 80 (198)
T d1rq2a1 3 VIKVVGI-GGGGVNAVNRMIEQGLKGVEFIAINTDAQALL-MSDADVKLDVGRDSTRGLGAGADPEVGRKAAEDAKDEIE 80 (198)
T ss_dssp CEEEEEE-HHHHHHHHHHHHHTTCCSEEEEEEESCHHHHH-HCCCSEEEECCTTTC-----CCCHHHHHHHHHHTHHHHH
T ss_pred eEEEEEe-CchHHHHHHHHHHcCCCCceEEEEcchHHHHh-cCCcchhhccccccccCCCcCcChhhhHhhHHHHHHHHH
Confidence 3556665 6779999999999884 4444444433222 222233333331 12467888
Q ss_pred HHhcCccEEEEC--C-cc-------hHhhhhhhcCCCEEEEEc
Q 021928 158 TALRGVRSIICP--S-EG-------FISNAGSLKGVQHVILLS 190 (305)
Q Consensus 158 ~~~~~~d~Vi~~--~-~g-------~~~~~a~~~gv~~~V~iS 190 (305)
++++++|.||.+ . ++ .+++.+++.++-.+-+++
T Consensus 81 ~~l~~~d~vfi~AGlGGgTGtGaaPviA~iake~g~l~v~ivt 123 (198)
T d1rq2a1 81 ELLRGADMVFVTAGEGGGTGTGGAPVVASIARKLGALTVGVVT 123 (198)
T ss_dssp HHHTTCSEEEEEEETTSSHHHHHHHHHHHHHHHHTCEEEEEEE
T ss_pred HHhcCCCEEEEEEecCCCCCcchHHHHHHHHHHcCCcEEEEEe
Confidence 999999999976 2 22 377888998875554444
|